Pregenerated sensors for TWF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000151239

Ensembl transcript IDs: ENST00000546662.5, ENST00000547459.5, ENST00000547961.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR TCA 72 bp	TTTAACATCTTCACTTGCTGGTTCTCGACAGCGTACTaGAGCCCCAGTCGCCTCCACTGTCCCAGCTCTTCC	+
Preference number: 3 (lower is better) Translates to: FNIFTCWFSTAY*SPSRLHCPSSS Trigger: GGAAGAGCTGGGACAGTGGAGGCGACTGGGGCTTCAGTACGCTGTCGAGAACCAGCAAGTGAAGATGTTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547459.5
CDS GCA 90 bp	CTGCAGCCCTCCCGGCTCTCCCGGCTCTCCCGGAAGCCCCTTCCCTaGGAGTCGCGCCGGGCGCTGTTACCTTGGATGCCGGTCTGGTGG	+
Preference number: 5 (lower is better) Translates to: LQPSRLSRLSRKPLP*ESRRALLPWMPVWW Trigger: CCACCAGACCGGCATCCAAGGTAACAGCGCCCGGCGCGACTCGCAGGGAAGGGGCTTCCGGGAGAGCCGGGAGAGCCGGGAGGGCTGCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547459.5
CDS TCA 90 bp	AGCCAATTTCCTTCGCTCCCCCGAATTTCGGATCAATCTGCAACGTaGCGGCAGCAGGGACCGGGCTGGAGGAGGACGCAGGCCGGCAGC	+
Preference number: 5 (lower is better) Translates to: SQFPSLPRISDQSAT*RQQGPGWRRTQAGS Trigger: GCTGCCGGCCTGCGTCCTCCTCCAGCCCGGTCCCTGCTGCCGTCACGTTGCAGATTGATCCGAAATTCGGGGGAGCGAAGGAAATTGGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000547459.5
CDS GCA 90 bp	CCTCGAAAGCCAATTTCCTTCGCTCCCCCGAATTTCGGATCAATCTaGAACGTGACGGCAGCAGGGACCGGGCTGGAGGAGGACGCAGGC	+
Preference number: 5 (lower is better) Translates to: PRKPISFAPPNFGSI*NVTAAGTGLEEDAG Trigger: GCCTGCGTCCTCCTCCAGCCCGGTCCCTGCTGCCGTCACGTTGCAGATTGATCCGAAATTCGGGGGAGCGAAGGAAATTGGCTTTCGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000547459.5
CDS GCA 72 bp	CCAATTTCCTTCGCTCCCCCGAATTTCGGATCAATCTaGAACGTGACGGCAGCAGGGACCGGGCTGGAGGAG	+
Preference number: 6 (lower is better) Translates to: PISFAPPNFGSI*NVTAAGTGLEE Trigger: CTCCTCCAGCCCGGTCCCTGCTGCCGTCACGTTGCAGATTGATCCGAAATTCGGGGGAGCGAAGGAAATTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000547459.5
CDS TCA 72 bp	ATGAAATTAGGGGCCCATAGGGACCTGCACAAAATATaGGGAATCCAAGTTACCGTAAGATTTGAACTTGCT	+
Preference number: 6 (lower is better) Translates to: MKLGAHRDLHKI*GIQVTVRFELA Trigger: AGCAAGTTCAAATCTTACGGTAACTTGGATTCCTCATATTTTGTGCAGGTCCCTATGGGCCCCTAATTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547961.1
CDS CAA 72 bp	AACCAGGAAATAATGGAGGTCAGATATAACTGCATATaGAACTGTCTGCACGCATTACATGCAACCATACAG	+
Preference number: 6 (lower is better) Translates to: NQEIMEVRYNCI*NCLHALHATIQ Trigger: CTGTATGGTTGCATGTAATGCGTGCAGACAGTTCAATATGCAGTTATATCTGACCTCCATTATTTCCTGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546662.5
CDS CAA 90 bp	CCAATTTCAAACCAGGAAATAATGGAGGTCAGATATAACTGCATATaGAACTGTCTGCACGCATTACATGCAACCATACAGATCAGTTTC	+
Preference number: 6 (lower is better) Translates to: PISNQEIMEVRYNCI*NCLHALHATIQISF Trigger: GAAACTGATCTGTATGGTTGCATGTAATGCGTGCAGACAGTTCAATATGCAGTTATATCTGACCTCCATTATTTCCTGGTTTGAAATTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546662.5

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