RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TVP23A (Homo sapiens)

Ensembl gene IDs: ENSG00000166676

Ensembl transcript IDs: ENST00000299866.13, ENST00000456096.6, ENST00000570692.1, ENST00000572102.5, ENST00000572428.5, ENST00000572980.5, ENST00000573360.5, ENST00000573857.5, ENST00000575135.5, ENST00000619408.1, ENST00000649981.1

Found 850 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACAGATGCCAGCGCTCTGGTGCTATGGGTCCTGGTCCCGGTGTGCTaGGGATCACAGGAAGGGCTGGCCTCAGAGCCCTGCTCCGCCACC +
Preference number: 1 (lower is better)
Translates to: TDASALVLWVLVPVC*GSQEGLASEPCSAT
Trigger: GGTGGCGGAGCAGGGCTCTGAGGCCAGCCCTTCCTGTGATCCTCAGCACACCGGGACCAGGACCCATAGCACCAGAGCGCTGGCATCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR CCA 90 bp GGTAGGAACCCCTCCTGGGGTTCACCTGAGGCTGGTGACCGGCCATaGGCAGTGCAGTCACTTGCCTGTTTCGCCAGCAGCTCAGGCCTG +
Preference number: 1 (lower is better)
Translates to: GRNPSWGSPEAGDRP*AVQSLACFASSSGL
Trigger: CAGGCCTGAGCTGCTGGCGAAACAGGCAAGTGACTGCACTGCCCATGGCCGGTCACCAGCCTCAGGTGAACCCCAGGAGGGGTTCCTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR CCA 90 bp GGCCCAGCGAACGTGCACTCAGGGGCCTCCCTAGCGAGTTCCACATaGTCTCATGGGCCCAGCGTTAACGGCGGAGGATGTCCAGGTTCT +
Preference number: 1 (lower is better)
Translates to: GPANVHSGASLASST*SHGPSVNGGGCPGS
Trigger: AGAACCTGGACATCCTCCGCCGTTAACGCTGGGCCCATGAGACCATGTGGAACTCGCTAGGGAGGCCCCTGAGTGCACGTTCGCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR CCA 90 bp CACTCACTGGGCAGCACATCCAGCCAGACCCGACCAGCTCCGGGATaGGGTGGGTCACAGCAAAAGGACCAGATGCTGGTGTGGTCCGAA +
Preference number: 1 (lower is better)
Translates to: HSLGSTSSQTRPAPG*GGSQQKDQMLVWSE
Trigger: TTCGGACCACACCAGCATCTGGTCCTTTTGCTGTGACCCACCCCATCCCGGAGCTGGTCGGGTCTGGCTGGATGTGCTGCCCAGTGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
3UTR CCA 90 bp CGAGAGAATGTTCAGGACCAAGCAGTTACCGAGCGAGGCACTCACTaGGCAGCACATCCAGCCAGACCCGACCAGCTCCGGGATGGGGTG +
Preference number: 1 (lower is better)
Translates to: RENVQDQAVTERGTH*AAHPARPDQLRDGV
Trigger: CACCCCATCCCGGAGCTGGTCGGGTCTGGCTGGATGTGCTGCCCAGTGAGTGCCTCGCTCGGTAACTGCTTGGTCCTGAACATTCTCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
3UTR GCA 90 bp CTCTGGGGACATGGTGGCAAAGAGTTACAGATGCCAGCGCTCTGGTaGTATGGGTCCTGGTCCCGGTGTGCTGAGGATCACAGGAAGGGC +
Preference number: 1 (lower is better)
Translates to: LWGHGGKELQMPALW*YGSWSRCAEDHRKG
Trigger: GCCCTTCCTGTGATCCTCAGCACACCGGGACCAGGACCCATAGCACCAGAGCGCTGGCATCTGTAACTCTTTGCCACCATGTCCCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR GCA 90 bp ATCATCGGGGTGGTGGAGAACATGAGTGGCTTCATCTGTCCTAAGTaGAAGGTGAGGGCGCGTGGGGCTGCCAGGCGAGCAAGATCTTGC +
Preference number: 1 (lower is better)
Translates to: IIGVVENMSGFICPK*KVRARGAARRARSC
Trigger: GCAAGATCTTGCTCGCCTGGCAGCCCCACGCGCCCTCACCTTGCACTTAGGACAGATGAAGCCACTCATGTTCTCCACCACCCCGATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR GCA 90 bp AGCACTTCAGTCTCCTCTGGGGACATGGTGGCAAAGAGTTACAGATaGCAGCGCTCTGGTGCTATGGGTCCTGGTCCCGGTGTGCTGAGG +
Preference number: 1 (lower is better)
Translates to: STSVSSGDMVAKSYR*QRSGAMGPGPGVLR
Trigger: CCTCAGCACACCGGGACCAGGACCCATAGCACCAGAGCGCTGGCATCTGTAACTCTTTGCCACCATGTCCCCAGAGGAGACTGAAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR CCA 90 bp GAGAGGGATCTGCCAGGGTGGGGTGAGAGGATGCCTGGGATCTCTTaGAACAGGGCTGTGCTCACACCAGCTGTTCTGATAATGCTGCCC +
Preference number: 1 (lower is better)
Translates to: ERDLPGWGERMPGIS*NRAVLTPAVLIMLP
Trigger: GGGCAGCATTATCAGAACAGCTGGTGTGAGCACAGCCCTGTTCCAAGAGATCCCAGGCATCCTCTCACCCCACCCTGGCAGATCCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR CCA 90 bp CTCCTCTGGGGACATGGTGGCAAAGAGTTACAGATGCCAGCGCTCTaGTGCTATGGGTCCTGGTCCCGGTGTGCTGAGGATCACAGGAAG +
Preference number: 1 (lower is better)
Translates to: LLWGHGGKELQMPAL*CYGSWSRCAEDHRK
Trigger: CTTCCTGTGATCCTCAGCACACCGGGACCAGGACCCATAGCACCAGAGCGCTGGCATCTGTAACTCTTTGCCACCATGTCCCCAGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR TCA 90 bp AAGGGAGACCTGGGTGAAAGTCAGGGACAGAAAGTAGCCCCAGCATaGCTATTCTGGGATCCCCAACCTCCCAGGTCTGGCCCAGCGAAC +
Preference number: 1 (lower is better)
Translates to: KGDLGESQGQKVAPA*LFWDPQPPRSGPAN
Trigger: GTTCGCTGGGCCAGACCTGGGAGGTTGGGGATCCCAGAATAGTCATGCTGGGGCTACTTTCTGTCCCTGACTTTCACCCAGGTCTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR GCA 90 bp GCACATCCATTCCTGCCAGCCTGCACCTCTGCCACAGTTCAGCTCTaGCGAGATGGGATTGGTGGGCAGGACGTTTGTCAGGGGAAACAT +
Preference number: 1 (lower is better)
Translates to: AHPFLPACTSATVQL*RDGIGGQDVCQGKH
Trigger: ATGTTTCCCCTGACAAACGTCCTGCCCACCAATCCCATCTCGGCAGAGCTGAACTGTGGCAGAGGTGCAGGCTGGCAGGAATGGATGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR CCA 90 bp TTTGTTGAGCCAGACCAAACCCACGTGCAGGCCACATTCAGCCAGTaGCAGCCATCAGAGGCCCCAGAGTTAGGGCAGAGGTGTCAGTGT +
Preference number: 1 (lower is better)
Translates to: FVEPDQTHVQATFSQ*QPSEAPELGQRCQC
Trigger: ACACTGACACCTCTGCCCTAACTCTGGGGCCTCTGATGGCTGCCACTGGCTGAATGTGGCCTGCACGTGGGTTTGGTCTGGCTCAACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR CCA 90 bp GGTGAGGGCGCGTGGGGCTGCCAGGCGAGCAAGATCTTGCTCTCATaGATGAGGAAACGATCGGAAGGCTGCTCTGCAAACTATTTCTGC +
Preference number: 1 (lower is better)
Translates to: GEGAWGCQASKILLS*MRKRSEGCSANYFC
Trigger: GCAGAAATAGTTTGCAGAGCAGCCTTCCGATCGTTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTGGCAGCCCCACGCGCCCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR CCA 90 bp CAGGAAGGCATGAGGACAGCACTTCAGTCTCCTCTGGGGACATGGTaGCAAAGAGTTACAGATGCCAGCGCTCTGGTGCTATGGGTCCTG +
Preference number: 1 (lower is better)
Translates to: QEGMRTALQSPLGTW*QRVTDASALVLWVL
Trigger: CAGGACCCATAGCACCAGAGCGCTGGCATCTGTAACTCTTTGCCACCATGTCCCCAGAGGAGACTGAAGTGCTGTCCTCATGCCTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR TCA 90 bp AGGGCGCGTGGGGCTGCCAGGCGAGCAAGATCTTGCTCTCATGGATaGGGAAACGATCGGAAGGCTGCTCTGCAAACTATTTCTGCTTTC +
Preference number: 1 (lower is better)
Translates to: RARGAARRARSCSHG*GNDRKAALQTISAF
Trigger: GAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGATCGTTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTGGCAGCCCCACGCGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR GCA 90 bp CCCGACCAGCTCCGGGATGGGGTGGGTCACAGCAAAAGGACCAGATaGTGGTGTGGTCCGAAGCCACTTTCTCAGAGACACTTTAATCAT +
Preference number: 1 (lower is better)
Translates to: PDQLRDGVGHSKRTR*WCGPKPLSQRHFNH
Trigger: ATGATTAAAGTGTCTCTGAGAAAGTGGCTTCGGACCACACCAGCATCTGGTCCTTTTGCTGTGACCCACCCCATCCCGGAGCTGGTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
3UTR CCA 90 bp AGACAGGAAGGCATGAGGACAGCACTTCAGTCTCCTCTGGGGACATaGTGGCAAAGAGTTACAGATGCCAGCGCTCTGGTGCTATGGGTC +
Preference number: 1 (lower is better)
Translates to: RQEGMRTALQSPLGT*WQRVTDASALVLWV
Trigger: GACCCATAGCACCAGAGCGCTGGCATCTGTAACTCTTTGCCACCATGTCCCCAGAGGAGACTGAAGTGCTGTCCTCATGCCTTCCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR TCA 90 bp CTGGGCAGGCCGTCTGGAACACTGTCTGGGACAGGAAACTGGCTGTaGCCTTGCCAATGTCACTGTTGCCTCCCATCTTACAAAGGATGT +
Preference number: 1 (lower is better)
Translates to: LGRPSGTLSGTGNWL*PCQCHCCLPSYKGC
Trigger: ACATCCTTTGTAAGATGGGAGGCAACAGTGACATTGGCAAGGTCACAGCCAGTTTCCTGTCCCAGACAGTGTTCCAGACGGCCTGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573360.5
3UTR CCA 90 bp TTCCCGCCTAGCAGAGATGACGGCCAGTTCCCTAAAGGTAAAGGTTaGGTTTTTCCACCACCAGTCACTGAGCTCCAAGCTCACACGCAG +
Preference number: 1 (lower is better)
Translates to: FPPSRDDGQFPKGKG*VFPPPVTELQAHTQ
Trigger: CTGCGTGTGAGCTTGGAGCTCAGTGACTGGTGGTGGAAAAACCCAACCTTTACCTTTAGGGAACTGGCCGTCATCTCTGCTAGGCGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
3UTR TCA 90 bp GACACAGAGCCAAACCCTATCAGGGCAGAAACCTCTAAGGCTTTATaGTCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGCACAG +
Preference number: 1 (lower is better)
Translates to: DTEPNPIRAETSKAL*SQIHCIAAIPSVAQ
Trigger: CTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAAGCCTTAGAGGTTTCTGCCCTGATAGGGTTTGGCTCTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR TCA 90 bp TGCAGCCATCCCCTCGGTTGCACAGACATTCCCTTTCTCGCACTTTaGTGCTGGAATCACTGGTCTTTTCACCTTCGTAGGAGGTGTCAC +
Preference number: 1 (lower is better)
Translates to: CSHPLGCTDIPFLAL*CWNHWSFHLRRRCH
Trigger: GTGACACCTCCTACGAAGGTGAAAAGACCAGTGATTCCAGCATCAAAGTGCGAGAAAGGGAATGTCTGTGCAACCGAGGGGATGGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR TCA 90 bp ACGTTTGTCAGGGGAAACATCTTCCTAGGAACAGACAGGAAGGCATaGGGACAGCACTTCAGTCTCCTCTGGGGACATGGTGGCAAAGAG +
Preference number: 1 (lower is better)
Translates to: TFVRGNIFLGTDRKA*GQHFSLLWGHGGKE
Trigger: CTCTTTGCCACCATGTCCCCAGAGGAGACTGAAGTGCTGTCCTCATGCCTTCCTGTCTGTTCCTAGGAAGATGTTTCCCCTGACAAACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR GCA 90 bp GTCACTGTTGCCTCCCATCTTACAAAGGATGTAGCCATACAGGTTTaGAGCTTGGAGAGAGATCCCAGCAACCACCAGAGCCAGCCACTT +
Preference number: 1 (lower is better)
Translates to: VTVASHLTKDVAIQV*SLERDPSNHQSQPL
Trigger: AAGTGGCTGGCTCTGGTGGTTGCTGGGATCTCTCTCCAAGCTGCAAACCTGTATGGCTACATCCTTTGTAAGATGGGAGGCAACAGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573360.5
3UTR CCA 90 bp CCCTTTACCACTTCAGACTTTGCTGGGGGTGTTAGCGTGGCTCAATaGAATGTTCTCCCCGGTGCATATGACGCAGAAACTCAGGCTGTA +
Preference number: 1 (lower is better)
Translates to: PFTTSDFAGGVSVAQ*NVLPGAYDAETQAV
Trigger: TACAGCCTGAGTTTCTGCGTCATATGCACCGGGGAGAACATTCCATTGAGCCACGCTAACACCCCCAGCAAAGTCTGAAGTGGTAAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
3UTR GCA 90 bp TCATGGATGAGGAAACGATCGGAAGGCTGCTCTGCAAACTATTTCTaGTTTCCCAGGCAGCTTTTGCAGTGGCCGGAAGTGGTGATGAGA +
Preference number: 1 (lower is better)
Translates to: SWMRKRSEGCSANYF*FPRQLLQWPEVVMR
Trigger: TCTCATCACCACTTCCGGCCACTGCAAAAGCTGCCTGGGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGATCGTTTCCTCATCCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR GCA 90 bp CAAGATCTTGCTCTCATGGATGAGGAAACGATCGGAAGGCTGCTCTaGAAACTATTTCTGCTTTCCCAGGCAGCTTTTGCAGTGGCCGGA +
Preference number: 1 (lower is better)
Translates to: QDLALMDEETIGRLL*KLFLLSQAAFAVAG
Trigger: TCCGGCCACTGCAAAAGCTGCCTGGGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGATCGTTTCCTCATCCATGAGAGCAAGATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR GCA 90 bp GCGAGCAAGATCTTGCTCTCATGGATGAGGAAACGATCGGAAGGCTaGTCTGCAAACTATTTCTGCTTTCCCAGGCAGCTTTTGCAGTGG +
Preference number: 1 (lower is better)
Translates to: ASKILLSWMRKRSEG*SANYFCFPRQLLQW
Trigger: CCACTGCAAAAGCTGCCTGGGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGATCGTTTCCTCATCCATGAGAGCAAGATCTTGCTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR CCA 90 bp ACTGAACTCCCTTTACCACTTCAGACTTTGCTGGGGGTGTTAGCGTaGCTCAATGGAATGTTCTCCCCGGTGCATATGACGCAGAAACTC +
Preference number: 1 (lower is better)
Translates to: TELPLPLQTLLGVLA*LNGMFSPVHMTQKL
Trigger: GAGTTTCTGCGTCATATGCACCGGGGAGAACATTCCATTGAGCCACGCTAACACCCCCAGCAAAGTCTGAAGTGGTAAAGGGAGTTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
3UTR TCA 90 bp CTCCAAATATCACTTGCCCTCTTCGAAACACGGTCATCTTTGAAGTaGAACGTGACAGCAGTCACTGCCTTCCCGCCTAGCAGAGATGAC +
Preference number: 1 (lower is better)
Translates to: LQISLALFETRSSLK*NVTAVTAFPPSRDD
Trigger: GTCATCTCTGCTAGGCGGGAAGGCAGTGACTGCTGTCACGTTTCACTTCAAAGATGACCGTGTTTCGAAGAGGGCAAGTGATATTTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
3UTR GCA 90 bp AATCCATATCATGGGGCAGATTATGAGGCCCAGCCAGAAGATTCGTaGTTCAGCTTCTGTGGCAGCAATGCTATTCGGAGAGACCTTCCT +
Preference number: 1 (lower is better)
Translates to: NPYHGADYEAQPEDS*FSFCGSNAIRRDLP
Trigger: AGGAAGGTCTCTCCGAATAGCATTGCTGCCACAGAAGCTGAAGCACGAATCTTCTGGCTGGGCCTCATAATCTGCCCCATGATATGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
3UTR GCA 90 bp TCGAAGAATCCAGTACTTTCCCGCCACTTGACTCCAAATATCACTTaGCCTCTTCGAAACACGGTCATCTTTGAAGTGAAACGTGACAGC +
Preference number: 1 (lower is better)
Translates to: SKNPVLSRHLTPNIT*PLRNTVIFEVKRDS
Trigger: GCTGTCACGTTTCACTTCAAAGATGACCGTGTTTCGAAGAGGGCAAGTGATATTTGGAGTCAAGTGGCGGGAAAGTACTGGATTCTTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
3UTR TCA 90 bp TTTTGTAATCTCCATCAGTCAAAAGAAGAGAACCTCATCAGTTCCTaGAACGAGAGAATGTTCAGGACCAAGCAGTTACCGAGCGAGGCA +
Preference number: 1 (lower is better)
Translates to: FCNLHQSKEENLISS*NERMFRTKQLPSEA
Trigger: TGCCTCGCTCGGTAACTGCTTGGTCCTGAACATTCTCTCGTTTCAGGAACTGATGAGGTTCTCTTCTTTTGACTGATGGAGATTACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
3UTR GCA 90 bp AAAATTATACACAGACAAAGCAGCAGGCAGAATGTGTGTGTCATGTaGTCCCATTCGTATTTTAGGTATATGAGAGTGTGTGTATGTGTG +
Preference number: 1 (lower is better)
Translates to: KIIHRQSSRQNVCVM*SHSYFRYMRVCVCV
Trigger: CACACATACACACACTCTCATATACCTAAAATACGAATGGGAGCACATGACACACACATTCTGCCTGCTGCTTTGTCTGTGTATAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR TCA 90 bp CTCAGGCCTGGGGAGTGGGCAGAGCAAGCTGATGGCAGGTCCACCCACGACTGGGTGGGCAGAGCAAGCTaGTGGCAGGTCCACCCACGA +
Preference number: 2 (lower is better)
Translates to: LRPGEWAEQADGRSTHDWVGRAS*WQVHPR
Trigger: TCGTGGGTGGACCTGCCATCAGCTTGCTCTGCCCAC...CCAGTCGTGGGTGGACCTGCCATCAGCTTGCTCTGCCCACTCCCCAGGCCTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp CCTAAGTGCAAGGTGAGGGCGCGTGGGGCTGCCAGGCGAGCAAGATCTTGCTCTCAAGGTGAGGGCGCGTaGGGCTGCCAGGCGAGCAAG +
Preference number: 2 (lower is better)
Translates to: PKCKVRARGAARRARSCSQGEGA*GCQASK
Trigger: CTTGCTCGCCTGGCAGCCCCACGCGCCCTCACCTTG...AGAGCAAGATCTTGCTCGCCTGGCAGCCCCACGCGCCCTCACCTTGCACTTAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR GCA 90 bp GGCTTCATCTGTCCTAAGTGCAAGGTGAGGGCGCGTGGGGCTGCCAGGCGAGCAGCCAGCCTGCACCTCTaGCACAGTTCAGCTCTGCCG +
Preference number: 2 (lower is better)
Translates to: GFICPKCKVRARGAARRAASLHL*HSSALP
Trigger: CGGCAGAGCTGAACTGTGGCAGAGGTGCAGGCTGGC...TGCTCGCCTGGCAGCCCCACGCGCCCTCACCTTGCACTTAGGACAGATGAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR GCA 90 bp GCTGGTGAATCTCCAGCCCCTCGAGGCCAGGCTTCTGAAAGTCACCTGGGCAGGGAGGGCGCGTGGGGCTaGCAGGCGAGCAAGATCTTG +
Preference number: 2 (lower is better)
Translates to: AGESPAPRGQASESHLGREGAWG*QASKIL
Trigger: CAAGATCTTGCTCGCCTGGCAGCCCCACGCGCCCTC...CCTGCCCAGGTGACTTTCAGAAGCCTGGCCTCGAGGGGCTGGAGATTCACCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR-3UTR GCA 90 bp CTCAGGCCTGGGGAGTGGGCAGAGCAAGCTGATGGCAGGTCCACCCACGACTGGGGCAGTGCAGTCACTTaGCTGTTTCGCCAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: LRPGEWAEQADGRSTHDWGSAVT*LFRQQL
Trigger: GAGCTGCTGGCGAAACAGGCAAGTGACTGCACTGCC...CCAGTCGTGGGTGGACCTGCCATCAGCTTGCTCTGCCCACTCCCCAGGCCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp CTCAGGCCTGGGGAGTGGGCAGAGCAAGCTGATGGCAGGTCCACCCACGACTGGGCTTCTTCCCCGACTTaGACTTCCCTGTCCCACAGG +
Preference number: 2 (lower is better)
Translates to: LRPGEWAEQADGRSTHDWASSPT*TSLSHR
Trigger: CCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGC...CCAGTCGTGGGTGGACCTGCCATCAGCTTGCTCTGCCCACTCCCCAGGCCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp ACCTCCCAGGTCTGGCCCAGCGAACGTGCACTCAGGGGCCTCCCTAGCGAGTTCTCAGCTCTGCCGAGATaGGATTGGTGGGCAGGACGT +
Preference number: 2 (lower is better)
Translates to: TSQVWPSERALRGLPSEFSALPR*DWWAGR
Trigger: ACGTCCTGCCCACCAATCCCATCTCGGCAGAGCTGA...GAACTCGCTAGGGAGGCCCCTGAGTGCACGTTCGCTGGGCCAGACCTGGGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR-3UTR TCA 90 bp CTGAGGCTGGTGACCGGCCATGGGCAGTGCAGTCACTTGCCTGTTTCGCCAGCACGCAGCTCACGTAGGTaGCGATGGCACTCACTCGGA +
Preference number: 2 (lower is better)
Translates to: LRLVTGHGQCSHLPVSPARSSRR*RWHSLG
Trigger: TCCGAGTGAGTGCCATCGTCACCTACGTGAGCTGCG...TGCTGGCGAAACAGGCAAGTGACTGCACTGCCCATGGCCGGTCACCAGCCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573360.5
3UTR-3UTR GCA 90 bp GTGCTAGGTAGGAACCCCTCCTGGGGTTCACCTGAGGCTGGTGACCGGCCATGGACCGGCCATGGGCAGTaGAGTCACTTGCCTGTTTCG +
Preference number: 2 (lower is better)
Translates to: VLGRNPSWGSPEAGDRPWTGHGQ*SHLPVS
Trigger: CGAAACAGGCAAGTGACTGCACTGCCCATGGCCGGT...CCATGGCCGGTCACCAGCCTCAGGTGAACCCCAGGAGGGGTTCCTACCTAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR GCA 90 bp CCTAAGTGCAAGGTGAGGGCGCGTGGGGCTGCCAGGCGAGCAAGATCTTGCTCTAGTGGTGATGAGAGCTaGCCTCTGAGGCCCCTGGAG +
Preference number: 2 (lower is better)
Translates to: PKCKVRARGAARRARSCSSGDES*PLRPLE
Trigger: CTCCAGGGGCCTCAGAGGGCAGCTCTCATCACCACT...AGAGCAAGATCTTGCTCGCCTGGCAGCCCCACGCGCCCTCACCTTGCACTTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR CCA 90 bp GGTGACCGGCCATGGGCAGTGCAGTCACTTGCCTGTTTCGCCAGCAGCTCAGGCGTGTGGAAGGACAGGTaGGTGGTGGGGTCTGTGATG +
Preference number: 2 (lower is better)
Translates to: GDRPWAVQSLACFASSSGVWKDR*VVGSVM
Trigger: CATCACAGACCCCACCACCCACCTGTCCTTCCACAC...GCCTGAGCTGCTGGCGAAACAGGCAAGTGACTGCACTGCCCATGGCCGGTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp CCCCACAGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTGCCACGCTGAAATGCTaGCTGGGGACCCTGCTGGAA +
Preference number: 2 (lower is better)
Translates to: PHRLLPRLGLPCPTGRHSATLKC*LGTLLE
Trigger: TTCCAGCAGGGTCCCCAGCCAGCATTTCAGCGTGGC...ACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCTGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR TCA 90 bp CTCAGGCCTGGGGAGTGGGCAGAGCAAGCTGATGGCAGGTCCACCCACGACTGGTGGACCCTATTTTCCTaGCTCACTGGGCCATATGGG +
Preference number: 2 (lower is better)
Translates to: LRPGEWAEQADGRSTHDWWTLFS*LTGPYG
Trigger: CCCATATGGCCCAGTGAGTCAGGAAAATAGGGTCCA...CCAGTCGTGGGTGGACCTGCCATCAGCTTGCTCTGCCCACTCCCCAGGCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR TCA 90 bp GGCCATGGGCAGTGCAGTCACTTGCCTGTTTCGCCAGCAGCTCAGGCCTGGGGACCACAAAGCTCTTGCTaGACCAGTCGCAGCTCACGT +
Preference number: 2 (lower is better)
Translates to: GHGQCSHLPVSPAAQAWGPQSSC*TSRSSR
Trigger: ACGTGAGCTGCGACTGGTTCAGCAAGAGCTTTGTGG...TCCCCAGGCCTGAGCTGCTGGCGAAACAGGCAAGTGACTGCACTGCCCATGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573360.5
3UTR-3UTR GCA 90 bp CCCCACAGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTGGCAGTGCAGTCACTTaGCTGTTTCGCCAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: PHRLLPRLGLPCPTGRHSGSAVT*LFRQQL
Trigger: GAGCTGCTGGCGAAACAGGCAAGTGACTGCACTGCC...ACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCTGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp CTCAGGCCTGGGGAGTGGGCAGAGCAAGCTGATGGCAGGTCCACCCACGACTGGACTCCTGGGCCCATGTaGAAGCTGCTGAATCAGTTC +
Preference number: 2 (lower is better)
Translates to: LRPGEWAEQADGRSTHDWTPGPM*KLLNQF
Trigger: GAACTGATTCAGCAGCTTCCACATGGGCCCAGGAGT...CCAGTCGTGGGTGGACCTGCCATCAGCTTGCTCTGCCCACTCCCCAGGCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp CCCACAGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGGTAGGAACCCCTCCTaGGGTTCACCTGAGGCTGGT +
Preference number: 2 (lower is better)
Translates to: PTGFFPDLDFPVPQGDTVGRNPS*GSPEAG
Trigger: ACCAGCCTCAGGTGAACCCCAGGAGGGGTTCCTACC...TACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp TGCAAGGTGAGGGCGCGTGGGGCTGCCAGGCGAGCAAGATCTTGCTCTCATGGACCGAGATGGGATTGGTaGGCAGGACGTTTGTCAGGG +
Preference number: 2 (lower is better)
Translates to: CKVRARGAARRARSCSHGPRWDW*AGRLSG
Trigger: CCCTGACAAACGTCCTGCCCACCAATCCCATCTCGG...TCCATGAGAGCAAGATCTTGCTCGCCTGGCAGCCCCACGCGCCCTCACCTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR CCA 90 bp ACCTCCCAGGTCTGGCCCAGCGAACGTGCACTCAGGGGCCTCCCTAGCGAGTTCTCGGAGAGACCTTCCTaGCTTCAAAGATCCAGTGGC +
Preference number: 2 (lower is better)
Translates to: TSQVWPSERALRGLPSEFSERPS*LQRSSG
Trigger: GCCACTGGATCTTTGAAGCCAGGAAGGTCTCTCCGA...GAACTCGCTAGGGAGGCCCCTGAGTGCACGTTCGCTGGGCCAGACCTGGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR-3UTR CCA 90 bp TGCTCCGCCACCACTAGCTGTGGGACTTGGGCTAGTCATTTCCGCTCTCAGCCTATGTGTGTTGGGGGCTaGGGAGCCCTCTGGGGAAGG +
Preference number: 2 (lower is better)
Translates to: CSATTSCGTWASHFRSQPMCVGG*GALWGR
Trigger: CCTTCCCCAGAGGGCTCCCCAGCCCCCAACACACAT...AGGCTGAGAGCGGAAATGACTAGCCCAAGTCCCACAGCTAGTGGTGGCGGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR-3UTR TCA 90 bp GGCTTCATCTGTCCTAAGTGCAAGGTGAGGGCGCGTGGGGCTGCCAGGCGAGCACTGCATGAATGGATGTaGTTGGGGACAGGAGCTTGC +
Preference number: 2 (lower is better)
Translates to: GFICPKCKVRARGAARRALHEWM*LGTGAC
Trigger: GCAAGCTCCTGTCCCCAATCACATCCATTCATGCAG...TGCTCGCCTGGCAGCCCCACGCGCCCTCACCTTGCACTTAGGACAGATGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR TCA 90 bp AAAGGTGGCCAAGGGGTGTCTAGGAAAGGACCCAGAAGGCGCCCTCACTCCAAGACTTCTGCCGCAAGGTaGAGCTGCCCATCATCGGGG +
Preference number: 2 (lower is better)
Translates to: KGGQGVSRKGPRRRPHSKTSAAR*SCPSSG
Trigger: CCCCGATGATGGGCAGCTTCACCTTGCGGCAGAAGT...CTTGGAGTGAGGGCGCCTTCTGGGTCCTTTCCTAGACACCCCTTGGCCACCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR-3UTR GCA 90 bp CAAGGTGAAGCTGCCCATCATCGGGGTGGTGGAGAACATGAGTGGCTTCATCTGGAGGGCGCGTGGGGCTaGCAGGCGAGCAAGATCTTG +
Preference number: 2 (lower is better)
Translates to: QGEAAHHRGGGEHEWLHLEGAWG*QASKIL
Trigger: CAAGATCTTGCTCGCCTGGCAGCCCCACGCGCCCTC...CAGATGAAGCCACTCATGTTCTCCACCACCCCGATGATGGGCAGCTTCACCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR CCA 90 bp CTGAGGCTGGTGACCGGCCATGGGCAGTGCAGTCACTTGCCTGTTTCGCCAGCAAGGGGACTGGAACAATaGCCACATGGCGGGGAAAGA +
Preference number: 2 (lower is better)
Translates to: LRLVTGHGQCSHLPVSPARGLEQ*PHGGER
Trigger: TCTTTCCCCGCCATGTGGCCATTGTTCCAGTCCCCT...TGCTGGCGAAACAGGCAAGTGACTGCACTGCCCATGGCCGGTCACCAGCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp CTGAGGCTGGTGACCGGCCATGGGCAGTGCAGTCACTTGCCTGTTTCGCCAGCAGGTCCTAGAGAAACCTaGGTGTGCATAGGAGGGGAC +
Preference number: 2 (lower is better)
Translates to: LRLVTGHGQCSHLPVSPAGPRET*VCIGGD
Trigger: GTCCCCTCCTATGCACACCCAGGTTTCTCTAGGACC...TGCTGGCGAAACAGGCAAGTGACTGCACTGCCCATGGCCGGTCACCAGCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp GGTGACCGGCCATGGGCAGTGCAGTCACTTGCCTGTTTCGCCAGCAGCTCAGGCCTGTCCACCTGGCTCTaGGATAACATGGTCCTAGAG +
Preference number: 2 (lower is better)
Translates to: GDRPWAVQSLACFASSSGLSTWL*DNMVLE
Trigger: CTCTAGGACCATGTTATCCCAGAGCCAGGTGGACAG...GCCTGAGCTGCTGGCGAAACAGGCAAGTGACTGCACTGCCCATGGCCGGTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp GGCCATGGGCAGTGCAGTCACTTGCCTGTTTCGCCAGCAGCTCAGGCCTGGGGATGTGTCCTGTCCACCTaGCTCTGGGATAACATGGTC +
Preference number: 2 (lower is better)
Translates to: GHGQCSHLPVSPAAQAWGCVLST*LWDNMV
Trigger: GACCATGTTATCCCAGAGCCAGGTGGACAGGACACA...TCCCCAGGCCTGAGCTGCTGGCGAAACAGGCAAGTGACTGCACTGCCCATGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp ATGAGTGGCTTCATCTGTCCTAAGTGCAAGGTGAGGGCGCGTGGGGCTGCCAGGTCAGCTCTGCCGAGATaGGATTGGTGGGCAGGACGT +
Preference number: 2 (lower is better)
Translates to: MSGFICPKCKVRARGAARSALPR*DWWAGR
Trigger: ACGTCCTGCCCACCAATCCCATCTCGGCAGAGCTGA...CCTGGCAGCCCCACGCGCCCTCACCTTGCACTTAGGACAGATGAAGCCACTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR CCA 90 bp ATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGCACAGACATTCCCTTTCAAGGTGAGGGCGCGTaGGGCTGCCAGGCGAGCAAG +
Preference number: 2 (lower is better)
Translates to: IADPLHCSHPLGCTDIPFQGEGA*GCQASK
Trigger: CTTGCTCGCCTGGCAGCCCCACGCGCCCTCACCTTG...AAAGGGAATGTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR CCA 90 bp GGTGACCGGCCATGGGCAGTGCAGTCACTTGCCTGTTTCGCCAGCAGCTCAGGCTCGGAGAGACCTTCCTaGCTTCAAAGATCCAGTGGC +
Preference number: 2 (lower is better)
Translates to: GDRPWAVQSLACFASSSGSERPS*LQRSSG
Trigger: GCCACTGGATCTTTGAAGCCAGGAAGGTCTCTCCGA...GCCTGAGCTGCTGGCGAAACAGGCAAGTGACTGCACTGCCCATGGCCGGTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573360.5
3UTR-3UTR TCA 90 bp GGGGACATGGTGGCAAAGAGTTACAGATGCCAGCGCTCTGGTGCTATGGGTCCTCGCAGCTCACGTAGGTaGCGATGGCACTCACTCGGA +
Preference number: 2 (lower is better)
Translates to: GDMVAKSYRCQRSGAMGPRSSRR*RWHSLG
Trigger: TCCGAGTGAGTGCCATCGTCACCTACGTGAGCTGCG...AGGACCCATAGCACCAGAGCGCTGGCATCTGTAACTCTTTGCCACCATGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR-3UTR GCA 90 bp CAAGGTGAAGCTGCCCATCATCGGGGTGGTGGAGAACATGAGTGGCTTCATCTGGCCAGCCTGCACCTCTaGCACAGTTCAGCTCTGCCG +
Preference number: 2 (lower is better)
Translates to: QGEAAHHRGGGEHEWLHLASLHL*HSSALP
Trigger: CGGCAGAGCTGAACTGTGGCAGAGGTGCAGGCTGGC...CAGATGAAGCCACTCATGTTCTCCACCACCCCGATGATGGGCAGCTTCACCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR GCA 90 bp TTCAGTCTCCTCTGGGGACATGGTGGCAAAGAGTTACAGATGCCAGCGCTCTGGGCCAGCCTGCACCTCTaGCACAGTTCAGCTCTGCCG +
Preference number: 2 (lower is better)
Translates to: FSLLWGHGGKELQMPALWASLHL*HSSALP
Trigger: CGGCAGAGCTGAACTGTGGCAGAGGTGCAGGCTGGC...CCAGAGCGCTGGCATCTGTAACTCTTTGCCACCATGTCCCCAGAGGAGACTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR-3UTR GCA 90 bp GGCTTCATCTGTCCTAAGTGCAAGGTGAGGGCGCGTGGGGCTGCCAGGCGAGCATGGAGGCAGTTGGGCTaGATGAATGGATGTGATTGG +
Preference number: 2 (lower is better)
Translates to: GFICPKCKVRARGAARRAWRQLG*MNGCDW
Trigger: CCAATCACATCCATTCATGCAGCCCAACTGCCTCCA...TGCTCGCCTGGCAGCCCCACGCGCCCTCACCTTGCACTTAGGACAGATGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR CCA 90 bp CCCACAGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTATCCTCCATCTATAGATaGTCCGAGGAAGGCCGCAGC +
Preference number: 2 (lower is better)
Translates to: PTGFFPDLDFPVPQGDTVSSIYR*SEEGRS
Trigger: GCTGCGGCCTTCCTCGGACCATCTATAGATGGAGGA...TACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp CCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAAGTTGAGGAAGCCACATTCAGCCAGTaGCAGCCATCAGAGGCCCCA +
Preference number: 2 (lower is better)
Translates to: PRLGLPCPTGRHSSEVEEATFSQ*QPSEAP
Trigger: TGGGGCCTCTGATGGCTGCCACTGGCTGAATGTGGC...TTCCTCAACTTCACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp CCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAAGTTGAGGAAGCCACGCTGAAATGCTaGCTGGGGACCCTGCTGGAA +
Preference number: 2 (lower is better)
Translates to: PRLGLPCPTGRHSSEVEEATLKC*LGTLLE
Trigger: TTCCAGCAGGGTCCCCAGCCAGCATTTCAGCGTGGC...TTCCTCAACTTCACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp AGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAAGGTAGGAACCCCTCCTaGGGTTCACCTGAGGCTGGT +
Preference number: 2 (lower is better)
Translates to: RLLPRLGLPCPTGRHSSEGRNPS*GSPEAG
Trigger: ACCAGCCTCAGGTGAACCCCAGGAGGGGTTCCTACC...TTCACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp TCCTGGGCCCATGTGGAAGCTGCTGAATCAGTTCTCTGTAGGGCCCTGGAACCTGAGCGAGGCACTCACTaGGCAGCACATCCAGCCAGA +
Preference number: 2 (lower is better)
Translates to: SWAHVEAAESVLCRALEPERGTH*AAHPAR
Trigger: TCTGGCTGGATGTGCTGCCCAGTGAGTGCCTCGCTC...AGGTTCCAGGGCCCTACAGAGAACTGATTCAGCAGCTTCCACATGGGCCCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
3UTR-3UTR CCA 90 bp AGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAAGAGCGAGGCACTCACTaGGCAGCACATCCAGCCAGA +
Preference number: 2 (lower is better)
Translates to: RLLPRLGLPCPTGRHSSEERGTH*AAHPAR
Trigger: TCTGGCTGGATGTGCTGCCCAGTGAGTGCCTCGCTC...TTCACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
3UTR-3UTR CCA 90 bp TCAGGCCTGGGGAGTGGGCAGAGCAAGCTGATGGCAGGTCCACCCACGACTGGGCAAGAGCTAAGCGGATaGTCACTGAACTCCCTTTAC +
Preference number: 2 (lower is better)
Translates to: SGLGSGQSKLMAGPPTTGQELSG*SLNSLY
Trigger: GTAAAGGGAGTTCAGTGACCATCCGCTTAGCTCTTG...CCCAGTCGTGGGTGGACCTGCCATCAGCTTGCTCTGCCCACTCCCCAGGCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573360.5
3UTR-3UTR TCA 90 bp AAACCTCTAAGGCTTTATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGGTCCTAAGTGCAAGGTaGGGGCGCGTGGGGCTGCCA +
Preference number: 2 (lower is better)
Translates to: KPLRLYDRRSTALQPSPRVLSAR*GRVGLP
Trigger: TGGCAGCCCCACGCGCCCTCACCTTGCACTTAGGAC...CCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAAGCCTTAGAGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR TCA 90 bp GGAATCACTGGTCTTTTCACCTTCGTAGGAGGTGTCACTCCAGGATGTCCGGAAGTCCTAAGTGCAAGGTaGGGGCGCGTGGGGCTGCCA +
Preference number: 2 (lower is better)
Translates to: GITGLFTFVGGVTPGCPEVLSAR*GRVGLP
Trigger: TGGCAGCCCCACGCGCCCTCACCTTGCACTTAGGAC...TTCCGGACATCCTGGAGTGACACCTCCTACGAAGGTGAAAAGACCAGTGATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR TCA 90 bp GGCCATGGGCAGTGCAGTCACTTGCCTGTTTCGCCAGCAGCTCAGGCCTGGGGATACTTTCCCGCCACTTaGCTCCAAATATCACTTGCC +
Preference number: 2 (lower is better)
Translates to: GHGQCSHLPVSPAAQAWGYFPAT*LQISLA
Trigger: GGCAAGTGATATTTGGAGTCAAGTGGCGGGAAAGTA...TCCCCAGGCCTGAGCTGCTGGCGAAACAGGCAAGTGACTGCACTGCCCATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573360.5
3UTR-3UTR GCA 90 bp CTGAGGCTGGTGACCGGCCATGGGCAGTGCAGTCACTTGCCTGTTTCGCCAGCATCCATGAGTACTAAATaGAGATGCCTGTGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: LRLVTGHGQCSHLPVSPASMSTK*RCLWGR
Trigger: CCTGCCCCACAGGCATCTGCATTTAGTACTCATGGA...TGCTGGCGAAACAGGCAAGTGACTGCACTGCCCATGGCCGGTCACCAGCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR GCA 90 bp CCGGAAAGAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCGGGGTGGTAGTGGTGATGAGAGCTaGCCTCTGAGGCCCCTGGAG +
Preference number: 2 (lower is better)
Translates to: PERNQLLPQGEAAHHRGGSGDES*PLRPLE
Trigger: CTCCAGGGGCCTCAGAGGGCAGCTCTCATCACCACT...ACCACCCCGATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR CCA 90 bp AGTGAAGCGGGCTCAAGATCTTCCCATTGTCACCAGCACGGAAAGAGCCCCAAGGCCACATTCAGCCAGTaGCAGCCATCAGAGGCCCCA +
Preference number: 2 (lower is better)
Translates to: SEAGSRSSHCHQHGKSPKATFSQ*QPSEAP
Trigger: TGGGGCCTCTGATGGCTGCCACTGGCTGAATGTGGC...CTTGGGGCTCTTTCCGTGCTGGTGACAATGGGAAGATCTTGAGCCCGCTTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp CCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAAGTTGAGGAAGTGTGGAAGGACAGGTaGGTGGTGGGGTCTGTGATG +
Preference number: 2 (lower is better)
Translates to: PRLGLPCPTGRHSSEVEEVWKDR*VVGSVM
Trigger: CATCACAGACCCCACCACCCACCTGTCCTTCCACAC...TTCCTCAACTTCACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR CAA 90 bp TGCCAGCCTGCACCTCTGCCACAGTTCAGCTCTGCCGAGATGGGATaGGTGGGCAGGACGTTTGTCAGGGGAAACATCTTCCTAGGAACA +
Preference number: 2 (lower is better)
Translates to: CQPAPLPQFSSAEMG*VGRTFVRGNIFLGT
Trigger: TGTTCCTAGGAAGATGTTTCCCCTGACAAACGTCCTGCCCACCAATCCCATCTCGGCAGAGCTGAACTGTGGCAGAGGTGCAGGCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR-3UTR TCA 90 bp TCCTGGGCCCATGTGGAAGCTGCTGAATCAGTTCTCTGTAGGGCCCTGGAACCTTGGAAGGAAGGTCCCTaGGACCCCACTGGTCTTTTC +
Preference number: 2 (lower is better)
Translates to: SWAHVEAAESVLCRALEPWKEGP*DPTGLF
Trigger: GAAAAGACCAGTGGGGTCTCAGGGACCTTCCTTCCA...AGGTTCCAGGGCCCTACAGAGAACTGATTCAGCAGCTTCCACATGGGCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR TCA 90 bp ACAGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGTGGACCCTATTTTCCTaGCTCACTGGGCCATATGGG +
Preference number: 2 (lower is better)
Translates to: TGFFPDLDFPVPQGDTVVWTLFS*LTGPYG
Trigger: CCCATATGGCCCAGTGAGTCAGGAAAATAGGGTCCA...CACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR TCA 90 bp CCGGAAAGAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCGGGGTGGTTCCACCACCAGTCACTaGGCTCCAAGCTCACACGCA +
Preference number: 2 (lower is better)
Translates to: PERNQLLPQGEAAHHRGGSTTSH*APSSHA
Trigger: TGCGTGTGAGCTTGGAGCTCAGTGACTGGTGGTGGA...ACCACCCCGATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR-3UTR TCA 90 bp CCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAAGTTGAGGAAGGAGGAGCAGCACCATaGCAAAACAGCCCACAAAGC +
Preference number: 2 (lower is better)
Translates to: PRLGLPCPTGRHSSEVEEGGAAP*QNSPQS
Trigger: GCTTTGTGGGCTGTTTTGTCATGGTGCTGCTCCTCC...TTCCTCAACTTCACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573360.5
3UTR-3UTR GCA 90 bp GAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCGGGGTGGTGGAGAACGCCACAGTTCAGCTCTaGCGAGATGGGATTGGTGGG +
Preference number: 2 (lower is better)
Translates to: EINFCRKVKLPIIGVVENATVQL*RDGIGG
Trigger: CCCACCAATCCCATCTCGGCAGAGCTGAACTGTGGC...GTTCTCCACCACCCCGATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR GCA 90 bp GGCGCGTGGGGCTGCCAGGCGAGCAAGATCTTGCTCTCATGGATGAGGAAACGATGGAGGCAGTTGGGCTaGATGAATGGATGTGATTGG +
Preference number: 2 (lower is better)
Translates to: GAWGCQASKILLSWMRKRWRQLG*MNGCDW
Trigger: CCAATCACATCCATTCATGCAGCCCAACTGCCTCCA...TCGTTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTGGCAGCCCCACGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR GCA 90 bp TTTATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGCACAGACATTGAGGGCGCGTGGGGCTaGCAGGCGAGCAAGATCTTG +
Preference number: 2 (lower is better)
Translates to: FMIADPLHCSHPLGCTDIEGAWG*QASKIL
Trigger: CAAGATCTTGCTCGCCTGGCAGCCCCACGCGCCCTC...AATGTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR GCA 90 bp GCAGATGCCTGTGGGGCAGGAAGCAACATAAAGGAGCCAGGGGTGTGGAAGGACGGGATCGTGGGATTCTaGTGTGTCGGAAGCTTAGTC +
Preference number: 2 (lower is better)
Translates to: ADACGAGSNIKEPGVWKDGIVGF*CVGSLV
Trigger: GACTAAGCTTCCGACACAGCAGAATCCCACGATCCC...GTCCTTCCACACCCCTGGCTCCTTTATGTTGCTTCCTGCCCCACAGGCATCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
3UTR-3UTR CCA 90 bp GTGCTAGGTAGGAACCCCTCCTGGGGTTCACCTGAGGCTGGTGACCGGCCATGGAAATGCAGATGCCTGTaGGGCAGGAAGCAACATAAA +
Preference number: 2 (lower is better)
Translates to: VLGRNPSWGSPEAGDRPWKCRCL*GRKQHK
Trigger: TTTATGTTGCTTCCTGCCCCACAGGCATCTGCATTT...CCATGGCCGGTCACCAGCCTCAGGTGAACCCCAGGAGGGGTTCCTACCTAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp GTGCTAGGTAGGAACCCCTCCTGGGGTTCACCTGAGGCTGGTGACCGGCCATGGAGCCCCAAGATCTTGTaGCCATTCTGTTTTCCTCTT +
Preference number: 2 (lower is better)
Translates to: VLGRNPSWGSPEAGDRPWSPKIL*PFCFPL
Trigger: AAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCT...CCATGGCCGGTCACCAGCCTCAGGTGAACCCCAGGAGGGGTTCCTACCTAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp CCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAAGTTGAGGAAAGGGGACTGGAACAATaGCCACATGGCGGGGAAAGA +
Preference number: 2 (lower is better)
Translates to: PRLGLPCPTGRHSSEVEERGLEQ*PHGGER
Trigger: TCTTTCCCCGCCATGTGGCCATTGTTCCAGTCCCCT...TTCCTCAACTTCACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp TCCTGGGCCCATGTGGAAGCTGCTGAATCAGTTCTCTGTAGGGCCCTGGAACCTTGCATAGGAGGGGACTaGAACAATGGCCACATGGCG +
Preference number: 2 (lower is better)
Translates to: SWAHVEAAESVLCRALEPCIGGD*NNGHMA
Trigger: CGCCATGTGGCCATTGTTCCAGTCCCCTCCTATGCA...AGGTTCCAGGGCCCTACAGAGAACTGATTCAGCAGCTTCCACATGGGCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp TGCAAGGTGAGGGCGCGTGGGGCTGCCAGGCGAGCAAGATCTTGCTCTCATGGAATGAATGGATGTGATTaGGGACAGGAGCTTGCAGCA +
Preference number: 2 (lower is better)
Translates to: CKVRARGAARRARSCSHGMNGCD*GQELAA
Trigger: TGCTGCAAGCTCCTGTCCCCAATCACATCCATTCAT...TCCATGAGAGCAAGATCTTGCTCGCCTGGCAGCCCCACGCGCCCTCACCTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR CCA 90 bp CCTAAGTGCAAGGTGAGGGCGCGTGGGGCTGCCAGGCGAGCAAGATCTTGCTCTATGAATGGATGTGATTaGGGACAGGAGCTTGCAGCA +
Preference number: 2 (lower is better)
Translates to: PKCKVRARGAARRARSCSMNGCD*GQELAA
Trigger: TGCTGCAAGCTCCTGTCCCCAATCACATCCATTCAT...AGAGCAAGATCTTGCTCGCCTGGCAGCCCCACGCGCCCTCACCTTGCACTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR TCA 90 bp GCAGATGCCTGTGGGGCAGGAAGCAACATAAAGGAGCCAGGGGTGTGGAAGGACGCAAGATGGGTAGTGTaGGGTATTCCGGTCACTTTC +
Preference number: 2 (lower is better)
Translates to: ADACGAGSNIKEPGVWKDARWVV*GIPVTF
Trigger: GAAAGTGACCGGAATACCTCACACTACCCATCTTGC...GTCCTTCCACACCCCTGGCTCCTTTATGTTGCTTCCTGCCCCACAGGCATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR TCA 90 bp AACATGAGTGGCTTCATCTGTCCTAAGTGCAAGGTGAGGGCGCGTGGGGCTGCCGCAAGATGGGTAGTGTaGGGTATTCCGGTCACTTTC +
Preference number: 2 (lower is better)
Translates to: NMSGFICPKCKVRARGAAARWVV*GIPVTF
Trigger: GAAAGTGACCGGAATACCTCACACTACCCATCTTGC...GGCAGCCCCACGCGCCCTCACCTTGCACTTAGGACAGATGAAGCCACTCATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR-3UTR TCA 90 bp GCCACATTCAGCCAGTGGCAGCCATCAGAGGCCCCAGAGTTAGGGCAGAGGTGTGTTCTTCATTACGAGTaGAGCGGGCTCAAGATCTTC +
Preference number: 2 (lower is better)
Translates to: ATFSQWQPSEAPELGQRCVLHYE*SGLKIF
Trigger: GAAGATCTTGAGCCCGCTTCACTCGTAATGAAGAAC...ACACCTCTGCCCTAACTCTGGGGCCTCTGATGGCTGCCACTGGCTGAATGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR TCA 90 bp AAACCTCTAAGGCTTTATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGACTTCTGCCGCAAGGTaGAGCTGCCCATCATCGGGG +
Preference number: 2 (lower is better)
Translates to: KPLRLYDRRSTALQPSPRTSAAR*SCPSSG
Trigger: CCCCGATGATGGGCAGCTTCACCTTGCGGCAGAAGT...CCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAAGCCTTAGAGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR TCA 90 bp CCATCTATAGATGGTCCGAGGAAGGCCGCAGCCACTGGTTATGAGCAAGATGGGCCACAAAGCTCTTGCTaGACCAGTCGCAGCTCACGT +
Preference number: 2 (lower is better)
Translates to: PSIDGPRKAAATGYEQDGPQSSC*TSRSSR
Trigger: ACGTGAGCTGCGACTGGTTCAGCAAGAGCTTTGTGG...CCCATCTTGCTCATAACCAGTGGCTGCGGCCTTCCTCGGACCATCTATAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
3UTR-3UTR TCA 90 bp CCATCTATAGATGGTCCGAGGAAGGCCGCAGCCACTGGTTATGAGCAAGATGGGGGAGGAGCAGCACCATaGCAAAACAGCCCACAAAGC +
Preference number: 2 (lower is better)
Translates to: PSIDGPRKAAATGYEQDGGGAAP*QNSPQS
Trigger: GCTTTGTGGGCTGTTTTGTCATGGTGCTGCTCCTCC...CCCATCTTGCTCATAACCAGTGGCTGCGGCCTTCCTCGGACCATCTATAGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
3UTR-3UTR TCA 90 bp TCCTGGGCCCATGTGGAAGCTGCTGAATCAGTTCTCTGTAGGGCCCTGGAACCTTCATGGGGCAGATTATaGGGCCCAGCCAGAAGATTC +
Preference number: 2 (lower is better)
Translates to: SWAHVEAAESVLCRALEPSWGRL*GPARRF
Trigger: GAATCTTCTGGCTGGGCCTCATAATCTGCCCCATGA...AGGTTCCAGGGCCCTACAGAGAACTGATTCAGCAGCTTCCACATGGGCCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573360.5
3UTR-3UTR TCA 90 bp GCAGATGCCTGTGGGGCAGGAAGCAACATAAAGGAGCCAGGGGTGTGGAAGGACACAGGAAACTGGCTGTaGCCTTGCCAATGTCACTGT +
Preference number: 2 (lower is better)
Translates to: ADACGAGSNIKEPGVWKDTGNWL*PCQCHC
Trigger: ACAGTGACATTGGCAAGGTCACAGCCAGTTTCCTGT...GTCCTTCCACACCCCTGGCTCCTTTATGTTGCTTCCTGCCCCACAGGCATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573360.5
3UTR-3UTR GCA 90 bp CAGCCATCCCCTCGGTTGCACAGACATTCCCTTTCTCGCACTTTGATGCTGGAACCATTCCTGCCAGCCTaGACCTCTGCCACAGTTCAG +
Preference number: 2 (lower is better)
Translates to: QPSPRLHRHSLSRTLMLEPFLPA*TSATVQ
Trigger: CTGAACTGTGGCAGAGGTGCAGGCTGGCAGGAATGG...TTCCAGCATCAAAGTGCGAGAAAGGGAATGTCTGTGCAACCGAGGGGATGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR GCA 90 bp CCGGAAAGAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCGGGGTGGTTTCATCTGTCCTAAGTaGAAGGTGAGGGCGCGTGGG +
Preference number: 2 (lower is better)
Translates to: PERNQLLPQGEAAHHRGGFICPK*KVRARG
Trigger: CCCACGCGCCCTCACCTTGCACTTAGGACAGATGAA...ACCACCCCGATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR GCA 90 bp AGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAAAGCAAAAGGACCAGATaGTGGTGTGGTCCGAAGCCA +
Preference number: 2 (lower is better)
Translates to: RLLPRLGLPCPTGRHSSESKRTR*WCGPKP
Trigger: TGGCTTCGGACCACACCAGCATCTGGTCCTTTTGCT...TTCACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
3UTR-3UTR GCA 90 bp AACGATCGGAAGGCTGCTCTGCAAACTATTTCTGCTTTCCCAGGCAGCTTTTGCATGCCAGCGCTCTGGTaGTATGGGTCCTGGTCCCGG +
Preference number: 2 (lower is better)
Translates to: NDRKAALQTISAFPGSFCMPALW*YGSWSR
Trigger: CCGGGACCAGGACCCATAGCACCAGAGCGCTGGCAT...GCAAAAGCTGCCTGGGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGATCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR-3UTR CCA 90 bp GGCCATGGGCAGTGCAGTCACTTGCCTGTTTCGCCAGCAGCTCAGGCCTGGGGATGTTTGTTAAAGCTGTaGTCTCTGAGTTTGTGGCTG +
Preference number: 2 (lower is better)
Translates to: GHGQCSHLPVSPAAQAWGCLLKL*SLSLWL
Trigger: CAGCCACAAACTCAGAGACCACAGCTTTAACAAACA...TCCCCAGGCCTGAGCTGCTGGCGAAACAGGCAAGTGACTGCACTGCCCATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp ACCAGCACGGAAAGAGCCCCAAGATCTTGTGGCCATTCTGTTTTCCTCTTGGACGCCACATTCAGCCAGTaGCAGCCATCAGAGGCCCCA +
Preference number: 2 (lower is better)
Translates to: TSTERAPRSCGHSVFLLDATFSQ*QPSEAP
Trigger: TGGGGCCTCTGATGGCTGCCACTGGCTGAATGTGGC...GTCCAAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTTTCCGTGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp CCCCACAGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGCCCCAAGATCTTGTaGCCATTCTGTTTTCCTCTT +
Preference number: 2 (lower is better)
Translates to: PHRLLPRLGLPCPTGRHSSPKIL*PFCFPL
Trigger: AAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCT...ACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCTGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp TGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCCTGAGGTCCACCCACGACTaGGGGCTGGCAGGGCAGACT +
Preference number: 2 (lower is better)
Translates to: WRGHFLLWLKCELALCSLRSTHD*GLAGQT
Trigger: AGTCTGCCCTGCCAGCCCCCAGTCGTGGGTGGACCT...CAGGGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp CCGGAAAGAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCGGGGTGGTCTGCCGAGATGGGATTaGTGGGCAGGACGTTTGTCA +
Preference number: 2 (lower is better)
Translates to: PERNQLLPQGEAAHHRGGLPRWD*WAGRLS
Trigger: TGACAAACGTCCTGCCCACCAATCCCATCTCGGCAG...ACCACCCCGATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR CCA 90 bp AGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAAGACCAGATGCTGGTGTaGTCCGAAGCCACTTTCTCA +
Preference number: 2 (lower is better)
Translates to: RLLPRLGLPCPTGRHSSEDQMLV*SEATFS
Trigger: TGAGAAAGTGGCTTCGGACCACACCAGCATCTGGTC...TTCACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
3UTR-3UTR CCA 90 bp AACATGAGTGGCTTCATCTGTCCTAAGTGCAAGGTGAGGGCGCGTGGGGCTGCCGTGCTTCAGCTTCTGTaGCAGCAATGCTATTCGGAG +
Preference number: 2 (lower is better)
Translates to: NMSGFICPKCKVRARGAAVLQLL*QQCYSE
Trigger: CTCCGAATAGCATTGCTGCCACAGAAGCTGAAGCAC...GGCAGCCCCACGCGCCCTCACCTTGCACTTAGGACAGATGAAGCCACTCATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR-3UTR CCA 90 bp AGTGAAGCGGGCTCAAGATCTTCCCATTGTCACCAGCACGGAAAGAGCCCCAAGCTTCTGAAAGTCACCTaGGCAGGCCGTCTGGAACAC +
Preference number: 2 (lower is better)
Translates to: SEAGSRSSHCHQHGKSPKLLKVT*AGRLEH
Trigger: GTGTTCCAGACGGCCTGCCCAGGTGACTTTCAGAAG...CTTGGGGCTCTTTCCGTGCTGGTGACAATGGGAAGATCTTGAGCCCGCTTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573360.5
3UTR-3UTR CCA 90 bp AACGATCGGAAGGCTGCTCTGCAAACTATTTCTGCTTTCCCAGGCAGCTTTTGCGATCACAGGAAGGGCTaGCCTCAGAGCCCTGCTCCG +
Preference number: 2 (lower is better)
Translates to: NDRKAALQTISAFPGSFCDHRKG*PQSPAP
Trigger: CGGAGCAGGGCTCTGAGGCCAGCCCTTCCTGTGATC...GCAAAAGCTGCCTGGGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGATCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR-3UTR TCA 90 bp ACAGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGGTTCTTCATTACGAGTaGAGCGGGCTCAAGATCTTC +
Preference number: 2 (lower is better)
Translates to: TGFFPDLDFPVPQGDTVVVLHYE*SGLKIF
Trigger: GAAGATCTTGAGCCCGCTTCACTCGTAATGAAGAAC...CACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR TCA 90 bp CAGCCATCCCCTCGGTTGCACAGACATTCCCTTTCTCGCACTTTGATGCTGGAAGGCAGTTGGGCTGCATaGATGGATGTGATTGGGGAC +
Preference number: 2 (lower is better)
Translates to: QPSPRLHRHSLSRTLMLEGSWAA*MDVIGD
Trigger: GTCCCCAATCACATCCATTCATGCAGCCCAACTGCC...TTCCAGCATCAAAGTGCGAGAAAGGGAATGTCTGTGCAACCGAGGGGATGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR TCA 90 bp CAGCCATCCCCTCGGTTGCACAGACATTCCCTTTCTCGCACTTTGATGCTGGAATCTCCCCGGTGCATATaGCGCAGAAACTCAGGCTGT +
Preference number: 2 (lower is better)
Translates to: QPSPRLHRHSLSRTLMLESPRCI*RRNSGC
Trigger: ACAGCCTGAGTTTCTGCGTCATATGCACCGGGGAGA...TTCCAGCATCAAAGTGCGAGAAAGGGAATGTCTGTGCAACCGAGGGGATGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR-3UTR GCA 90 bp GGAATCACTGGTCTTTTCACCTTCGTAGGAGGTGTCACTCCAGGATGTCCGGAACCATTCCTGCCAGCCTaGACCTCTGCCACAGTTCAG +
Preference number: 2 (lower is better)
Translates to: GITGLFTFVGGVTPGCPEPFLPA*TSATVQ
Trigger: CTGAACTGTGGCAGAGGTGCAGGCTGGCAGGAATGG...TTCCGGACATCCTGGAGTGACACCTCCTACGAAGGTGAAAAGACCAGTGATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR GCA 90 bp TTTATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGCACAGACATTAGTGGTGATGAGAGCTaGCCTCTGAGGCCCCTGGAG +
Preference number: 2 (lower is better)
Translates to: FMIADPLHCSHPLGCTDISGDES*PLRPLE
Trigger: CTCCAGGGGCCTCAGAGGGCAGCTCTCATCACCACT...AATGTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR GCA 90 bp AGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAACTTCTGTGGCAGCAATaGTATTCGGAGAGACCTTCC +
Preference number: 2 (lower is better)
Translates to: RLLPRLGLPCPTGRHSSELLWQQ*YSERPS
Trigger: GGAAGGTCTCTCCGAATAGCATTGCTGCCACAGAAG...TTCACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573360.5
3UTR-3UTR CCA 90 bp GCAGATGCCTGTGGGGCAGGAAGCAACATAAAGGAGCCAGGGGTGTGGAAGGACCCAGCCTGGCTAACATaGAGAAACACTGTCTCTACT +
Preference number: 2 (lower is better)
Translates to: ADACGAGSNIKEPGVWKDPAWLT*RNTVST
Trigger: AGTAGAGACAGTGTTTCTCCATGTTAGCCAGGCTGG...GTCCTTCCACACCCCTGGCTCCTTTATGTTGCTTCCTGCCCCACAGGCATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp CCTCTAAGGCTTTATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGCTGCCGAGATGGGATTaGTGGGCAGGACGTTTGTCA +
Preference number: 2 (lower is better)
Translates to: PLRLYDRRSTALQPSPRLLPRWD*WAGRLS
Trigger: TGACAAACGTCCTGCCCACCAATCCCATCTCGGCAG...CAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAAGCCTTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR CCA 90 bp CCGGAAAGAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCGGGGTGGTGTTAGCGTGGCTCAATaGAATGTTCTCCCCGGTGCA +
Preference number: 2 (lower is better)
Translates to: PERNQLLPQGEAAHHRGGVSVAQ*NVLPGA
Trigger: TGCACCGGGGAGAACATTCCATTGAGCCACGCTAAC...ACCACCCCGATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR CAA 90 bp AGAGCTAAGCGGATGGTCACTGAACTCCCTTTACCACTTCAGACTTaGCTGGGGGTGTTAGCGTGGCTCAATGGAATGTTCTCCCCGGTG +
Preference number: 2 (lower is better)
Translates to: RAKRMVTELPLPLQT*LGVLAWLNGMFSPV
Trigger: CACCGGGGAGAACATTCCATTGAGCCACGCTAACACCCCCAGCAAAGTCTGAAGTGGTAAAGGGAGTTCAGTGACCATCCGCTTAGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
3UTR-3UTR TCA 90 bp CCATCTATAGATGGTCCGAGGAAGGCCGCAGCCACTGGTTATGAGCAAGATGGGGCAAGATGGGTAGTGTaGGGTATTCCGGTCACTTTC +
Preference number: 2 (lower is better)
Translates to: PSIDGPRKAAATGYEQDGARWVV*GIPVTF
Trigger: GAAAGTGACCGGAATACCTCACACTACCCATCTTGC...CCCATCTTGCTCATAACCAGTGGCTGCGGCCTTCCTCGGACCATCTATAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
ENST00000649981.1
3UTR-3UTR TCA 90 bp AGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAAGAAGCCAGGAGTCCATaGGAAATCTCTCAATGTGTG +
Preference number: 2 (lower is better)
Translates to: RLLPRLGLPCPTGRHSSEEARSP*EISQCV
Trigger: CACACATTGAGAGATTTCTCATGGACTCCTGGCTTC...TTCACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR TCA 90 bp CTGAGGCTGGTGACCGGCCATGGGCAGTGCAGTCACTTGCCTGTTTCGCCAGCAAACCATGTGCATTCATaGTCCTTTCACTCAAAAGCT +
Preference number: 2 (lower is better)
Translates to: LRLVTGHGQCSHLPVSPANHVHS*SFHSKA
Trigger: AGCTTTTGAGTGAAAGGATCATGAATGCACATGGTT...TGCTGGCGAAACAGGCAAGTGACTGCACTGCCCATGGCCGGTCACCAGCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR TCA 90 bp TCGGAAGGCTGCTCTGCAAACTATTTCTGCTTTCCCAGGCAGCTTTTGCAGTGGGGCAGTTGGGCTGCATaGATGGATGTGATTGGGGAC +
Preference number: 2 (lower is better)
Translates to: SEGCSANYFCFPRQLLQWGSWAA*MDVIGD
Trigger: GTCCCCAATCACATCCATTCATGCAGCCCAACTGCC...CCACTGCAAAAGCTGCCTGGGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR TCA 90 bp CAGGATGTCCGGAAAGAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCGGCAGTTGGGCTGCATaGATGGATGTGATTGGGGAC +
Preference number: 2 (lower is better)
Translates to: QDVRKEINFCRKVKLPIIGSWAA*MDVIGD
Trigger: GTCCCCAATCACATCCATTCATGCAGCCCAACTGCC...GATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTTCCGGACATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR TCA 90 bp CGCAAGGTGAAGCTGCCCATCATCGGGGTGGTGGAGAACATGAGTGGCTTCATCTACTTTCCCGCCACTTaGCTCCAAATATCACTTGCC +
Preference number: 2 (lower is better)
Translates to: RKVKLPIIGVVENMSGFIYFPAT*LQISLA
Trigger: GGCAAGTGATATTTGGAGTCAAGTGGCGGGAAAGTA...GATGAAGCCACTCATGTTCTCCACCACCCCGATGATGGGCAGCTTCACCTTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR-3UTR TCA 90 bp ATGGCTGGGAAGGCCCCAGGAAACTTAACAATCATGGTGGAAGGCAAAGCAGGCGAAGGGAGACCTGGGTaGAAGTCAGGGACAGAAAGT +
Preference number: 2 (lower is better)
Translates to: MAGKAPGNLTIMVEGKAGEGRPG*KSGTES
Trigger: ACTTTCTGTCCCTGACTTTCACCCAGGTCTCCCTTC...GCCTGCTTTGCCTTCCACCATGATTGTTAAGTTTCCTGGGGCCTTCCCAGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR-3UTR GCA 90 bp ATTCAGCCAGTGGCAGCCATCAGAGGCCCCAGAGTTAGGGCAGAGGTGTCAGTGGCCATTAGCACTCTATaGCTGTCGTCTTGTTTTCCA +
Preference number: 2 (lower is better)
Translates to: IQPVAAIRGPRVRAEVSVAISTL*LSSCFP
Trigger: TGGAAAACAAGACGACAGGCATAGAGTGCTAATGGC...CACTGACACCTCTGCCCTAACTCTGGGGCCTCTGATGGCTGCCACTGGCTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp TGCTGGAATCACTGGTCTTTTCACCTTCGTAGGAGGTGTCACTCCAGGATGTCCTCCTCCATCTATAGATaGTCCGAGGAAGGCCGCAGC +
Preference number: 2 (lower is better)
Translates to: CWNHWSFHLRRRCHSRMSSSIYR*SEEGRS
Trigger: GCTGCGGCCTTCCTCGGACCATCTATAGATGGAGGA...GGACATCCTGGAGTGACACCTCCTACGAAGGTGAAAAGACCAGTGATTCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR-3UTR CCA 90 bp TTTGTTGAGCCAGACCAAACCCACGTGCAGGCCACATTCAGCCAGTGGCAGCCACCAGCCTGGCTAACATaGAGAAACACTGTCTCTACT +
Preference number: 2 (lower is better)
Translates to: FVEPDQTHVQATFSQWQPPAWLT*RNTVST
Trigger: AGTAGAGACAGTGTTTCTCCATGTTAGCCAGGCTGG...TGGCTGCCACTGGCTGAATGTGGCCTGCACGTGGGTTTGGTCTGGCTCAACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp GCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCGTGTGGAAGGACAGGTaGGTGGTGGGGTCTGTGATG +
Preference number: 2 (lower is better)
Translates to: AYVLWRGHFLLWLKCELAVWKDR*VVGSVM
Trigger: CATCACAGACCCCACCACCCACCTGTCCTTCCACAC...GGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp GCAGATGCCTGTGGGGCAGGAAGCAACATAAAGGAGCCAGGGGTGTGGAAGGACTCCCTGAGACCCCACTaGTCTTTTCTACTTTGTTCT +
Preference number: 2 (lower is better)
Translates to: ADACGAGSNIKEPGVWKDSLRPH*SFLLCS
Trigger: AGAACAAAGTAGAAAAGACCAGTGGGGTCTCAGGGA...GTCCTTCCACACCCCTGGCTCCTTTATGTTGCTTCCTGCCCCACAGGCATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp ACAGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAGCCCTTTTCGGACTTaGCCTTTTATGCCATATCCT +
Preference number: 2 (lower is better)
Translates to: TGFFPDLDFPVPQGDTVVSPFRT*PFMPYP
Trigger: AGGATATGGCATAAAAGGCCAAGTCCGAAAAGGGCT...CACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp TACGGCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGCTGGTGACCGGCCATaGGCAGTGCAGTCACTTGCC +
Preference number: 2 (lower is better)
Translates to: YGIRPMERTFPVMAQVRIAGDRP*AVQSLA
Trigger: GGCAAGTGACTGCACTGCCCATGGCCGGTCACCAGC...AATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGCCGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp GCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCGCTTCTTCCCCGACTTaGACTTCCCTGTCCCACAGG +
Preference number: 2 (lower is better)
Translates to: AYVLWRGHFLLWLKCELAASSPT*TSLSHR
Trigger: CCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGC...GGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp GCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCACTCACTGGGCCATATaGGCTCCCCATCTCCCACCA +
Preference number: 2 (lower is better)
Translates to: AYVLWRGHFLLWLKCELATHWAI*APHLPP
Trigger: TGGTGGGAGATGGGGAGCCCATATGGCCCAGTGAGT...GGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp GATGAGGAAACGATCGGAAGGCTGCTCTGCAAACTATTTCTGCTTTCCCAGGCACCGAGATGGGATTGGTaGGCAGGACGTTTGTCAGGG +
Preference number: 2 (lower is better)
Translates to: DEETIGRLLCKLFLLSQAPRWDW*AGRLSG
Trigger: CCCTGACAAACGTCCTGCCCACCAATCCCATCTCGG...TGCCTGGGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGATCGTTTCCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR CCA 90 bp GATGAGGAAACGATCGGAAGGCTGCTCTGCAAACTATTTCTGCTTTCCCAGGCATCAGCTCTGCCGAGATaGGATTGGTGGGCAGGACGT +
Preference number: 2 (lower is better)
Translates to: DEETIGRLLCKLFLLSQASALPR*DWWAGR
Trigger: ACGTCCTGCCCACCAATCCCATCTCGGCAGAGCTGA...TGCCTGGGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGATCGTTTCCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR CCA 90 bp AAAGGTGGCCAAGGGGTGTCTAGGAAAGGACCCAGAAGGCGCCCTCACTCCAAGCCTAAAGGTAAAGGTTaGGTTTTTCCACCACCAGTC +
Preference number: 2 (lower is better)
Translates to: KGGQGVSRKGPRRRPHSKPKGKG*VFPPPV
Trigger: GACTGGTGGTGGAAAAACCCAACCTTTACCTTTAGG...CTTGGAGTGAGGGCGCCTTCTGGGTCCTTTCCTAGACACCCCTTGGCCACCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
3UTR-3UTR CCA 90 bp TATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGCACAGACATTCCCTGGGGGTGTTAGCGTaGCTCAATGGAATGTTCTCC +
Preference number: 2 (lower is better)
Translates to: YDRRSTALQPSPRLHRHSLGVLA*LNGMFS
Trigger: GGAGAACATTCCATTGAGCCACGCTAACACCCCCAG...GGAATGTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR CAA 90 bp TGGCAGCCATCAGAGGCCCCAGAGTTAGGGCAGAGGTGTCAGTGTTaGTTAAAGCTGTGGTCTCTGAGTTTGTGGCTGGGTTTTACTTGC +
Preference number: 2 (lower is better)
Translates to: WQPSEAPELGQRCQC*LKLWSLSLWLGFTC
Trigger: GCAAGTAAAACCCAGCCACAAACTCAGAGACCACAGCTTTAACAAACACTGACACCTCTGCCCTAACTCTGGGGCCTCTGATGGCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR CAA 90 bp TCAGGGCAGAAACCTCTAAGGCTTTATGATCGCAGATCCACTGCATaGCAGCCATCCCCTCGGTTGCACAGACATTCCCTTTCTCGCACT +
Preference number: 2 (lower is better)
Translates to: SGQKPLRLYDRRSTA*QPSPRLHRHSLSRT
Trigger: AGTGCGAGAAAGGGAATGTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAAGCCTTAGAGGTTTCTGCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR TCA 90 bp CAGGATGTCCGGAAAGAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCCTGCATGAATGGATGTaGTTGGGGACAGGAGCTTGC +
Preference number: 2 (lower is better)
Translates to: QDVRKEINFCRKVKLPIILHEWM*LGTGAC
Trigger: GCAAGCTCCTGTCCCCAATCACATCCATTCATGCAG...GATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTTCCGGACATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR TCA 90 bp GGAATCACTGGTCTTTTCACCTTCGTAGGAGGTGTCACTCCAGGATGTCCGGAACTGCATGAATGGATGTaGTTGGGGACAGGAGCTTGC +
Preference number: 2 (lower is better)
Translates to: GITGLFTFVGGVTPGCPELHEWM*LGTGAC
Trigger: GCAAGCTCCTGTCCCCAATCACATCCATTCATGCAG...TTCCGGACATCCTGGAGTGACACCTCCTACGAAGGTGAAAAGACCAGTGATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR TCA 90 bp AAACCTCTAAGGCTTTATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGGGGTGGTGGAGAACATaGGTGGCTTCATCTGTCCTA +
Preference number: 2 (lower is better)
Translates to: KPLRLYDRRSTALQPSPRGWWRT*VASSVL
Trigger: TAGGACAGATGAAGCCACTCATGTTCTCCACCACCC...CCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAAGCCTTAGAGGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR TCA 90 bp TCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGCACAGACATTCCCTTTCCGGTCATCTTTGAAGTaGAACGTGACAGCAGTCACT +
Preference number: 2 (lower is better)
Translates to: SQIHCIAAIPSVAQTFPFRSSLK*NVTAVT
Trigger: AGTGACTGCTGTCACGTTTCACTTCAAAGATGACCG...GAAAGGGAATGTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR-3UTR GCA 90 bp TGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCCTGGGCAGTGCAGTCACTTaGCTGTTTCGCCAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: WRGHFLLWLKCELALCSLGSAVT*LFRQQL
Trigger: GAGCTGCTGGCGAAACAGGCAAGTGACTGCACTGCC...CAGGGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR GCA 90 bp CCTTTCTCGCACTTTGATGCTGGAATCACTGGTCTTTTCACCTTCGTAGGAGGTGCCACAGTTCAGCTCTaGCGAGATGGGATTGGTGGG +
Preference number: 2 (lower is better)
Translates to: PFSHFDAGITGLFTFVGGATVQL*RDGIGG
Trigger: CCCACCAATCCCATCTCGGCAGAGCTGAACTGTGGC...ACCTCCTACGAAGGTGAAAAGACCAGTGATTCCAGCATCAAAGTGCGAGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR GCA 90 bp TGCTTCAGCTTCTGTGGCAGCAATGCTATTCGGAGAGACCTTCCTGGCTTCAAATTCATCTGTCCTAAGTaGAAGGTGAGGGCGCGTGGG +
Preference number: 2 (lower is better)
Translates to: CFSFCGSNAIRRDLPGFKFICPK*KVRARG
Trigger: CCCACGCGCCCTCACCTTGCACTTAGGACAGATGAA...TTTGAAGCCAGGAAGGTCTCTCCGAATAGCATTGCTGCCACAGAAGCTGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR-3UTR CCA 90 bp CTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCGCCACATTCAGCCAGTaGCAGCCATCAGAGGCCCCA +
Preference number: 2 (lower is better)
Translates to: LWRGHFLLWLKCELALCSATFSQ*QPSEAP
Trigger: TGGGGCCTCTGATGGCTGCCACTGGCTGAATGTGGC...GGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp CCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAAGTTGAGGAAAAATGCAGATGCCTGTaGGGCAGGAAGCAACATAAA +
Preference number: 2 (lower is better)
Translates to: PRLGLPCPTGRHSSEVEEKCRCL*GRKQHK
Trigger: TTTATGTTGCTTCCTGCCCCACAGGCATCTGCATTT...TTCCTCAACTTCACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp TACGGCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGCCACGCTGAAATGCTaGCTGGGGACCCTGCTGGAA +
Preference number: 2 (lower is better)
Translates to: YGIRPMERTFPVMAQVRIATLKC*LGTLLE
Trigger: TTCCAGCAGGGTCCCCAGCCAGCATTTCAGCGTGGC...AATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGCCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp GGCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCTGCATAGGAGGGGACTaGAACAATGGCCACATGGCG +
Preference number: 2 (lower is better)
Translates to: GIRPMERTFPVMAQVRIGCIGGD*NNGHMA
Trigger: CGCCATGTGGCCATTGTTCCAGTCCCCTCCTATGCA...GCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp AGCAGGCAGAATGTGTGTGTCATGTGCTCCCATTCGTATTTTAGGTATATGAGAAGGTCCACCCACGACTaGGGGCTGGCAGGGCAGACT +
Preference number: 2 (lower is better)
Translates to: SRQNVCVMCSHSYFRYMRRSTHD*GLAGQT
Trigger: AGTCTGCCCTGCCAGCCCCCAGTCGTGGGTGGACCT...TCTCATATACCTAAAATACGAATGGGAGCACATGACACACACATTCTGCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp ACCCTATCAGGGCAGAAACCTCTAAGGCTTTATGATCGCAGATCCACTGCATTGCCGAGATGGGATTGGTaGGCAGGACGTTTGTCAGGG +
Preference number: 2 (lower is better)
Translates to: TLSGQKPLRLYDRRSTALPRWDW*AGRLSG
Trigger: CCCTGACAAACGTCCTGCCCACCAATCCCATCTCGG...CAATGCAGTGGATCTGCGATCATAAAGCCTTAGAGGTTTCTGCCCTGATAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR CCA 90 bp GGAATCACTGGTCTTTTCACCTTCGTAGGAGGTGTCACTCCAGGATGTCCGGAAAGGCAGCTTTTGCAGTaGCCGGAAGTGGTGATGAGA +
Preference number: 2 (lower is better)
Translates to: GITGLFTFVGGVTPGCPERQLLQ*PEVVMR
Trigger: TCTCATCACCACTTCCGGCCACTGCAAAAGCTGCCT...TTCCGGACATCCTGGAGTGACACCTCCTACGAAGGTGAAAAGACCAGTGATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR CCA 90 bp AAACCTCTAAGGCTTTATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGAGGCAGCTTTTGCAGTaGCCGGAAGTGGTGATGAGA +
Preference number: 2 (lower is better)
Translates to: KPLRLYDRRSTALQPSPRRQLLQ*PEVVMR
Trigger: TCTCATCACCACTTCCGGCCACTGCAAAAGCTGCCT...CCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAAGCCTTAGAGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR CCA 90 bp TACGGCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTCGACCAGCTCCGGGATaGGGTGGGTCACAGCAAAAG +
Preference number: 2 (lower is better)
Translates to: YGIRPMERTFPVMAQVRIRPAPG*GGSQQK
Trigger: CTTTTGCTGTGACCCACCCCATCCCGGAGCTGGTCG...AATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGCCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
3UTR CAA 90 bp AGGCTTTATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTaGCACAGACATTCCCTTTCTCGCACTTTGATGCTGGAATCACTG +
Preference number: 2 (lower is better)
Translates to: RLYDRRSTALQPSPR*HRHSLSRTLMLESL
Trigger: CAGTGATTCCAGCATCAAAGTGCGAGAAAGGGAATGTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR TCA 90 bp TCCTGGGCCCATGTGGAAGCTGCTGAATCAGTTCTCTGTAGGGCCCTGGAACCTTTTCTGTACACCACCTaGTTATTTAGCCACGCTGAA +
Preference number: 2 (lower is better)
Translates to: SWAHVEAAESVLCRALEPFLYTT*LFSHAE
Trigger: TTCAGCGTGGCTAAATAATCAGGTGGTGTACAGAAA...AGGTTCCAGGGCCCTACAGAGAACTGATTCAGCAGCTTCCACATGGGCCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR TCA 90 bp CCACTGGTTATGAGCAAGATGGGTAGTGTGAGGTATTCCGGTCACTTTCAAAGATCCACCACCAGTCACTaGGCTCCAAGCTCACACGCA +
Preference number: 2 (lower is better)
Translates to: PLVMSKMGSVRYSGHFQRSTTSH*APSSHA
Trigger: TGCGTGTGAGCTTGGAGCTCAGTGACTGGTGGTGGA...TCTTTGAAAGTGACCGGAATACCTCACACTACCCATCTTGCTCATAACCAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
3UTR-3UTR GCA 90 bp TCTGGAAAGACACCTAGAACACTAGTAGCCCTTTTCGGACTTGGCCTTTTATGCTTAGCCACGCTGAAATaGTGGCTGGGGACCCTGCTG +
Preference number: 2 (lower is better)
Translates to: SGKTPRTLVALFGLGLLCLATLK*WLGTLL
Trigger: CAGCAGGGTCCCCAGCCAGCATTTCAGCGTGGCTAA...GCATAAAAGGCCAAGTCCGAAAAGGGCTACTAGTGTTCTAGGTGTCTTTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR GCA 90 bp TATTTCTGCTTTCCCAGGCAGCTTTTGCAGTGGCCGGAAGTGGTGATGAGAGCTTGGAGGCAGTTGGGCTaGATGAATGGATGTGATTGG +
Preference number: 2 (lower is better)
Translates to: YFCFPRQLLQWPEVVMRAWRQLG*MNGCDW
Trigger: CCAATCACATCCATTCATGCAGCCCAACTGCCTCCA...AGCTCTCATCACCACTTCCGGCCACTGCAAAAGCTGCCTGGGAAAGCAGAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR GCA 90 bp GTGGTGGAGAACATGAGTGGCTTCATCTGTCCTAAGTGCAAGGTGAGGGCGCGTATCGGAAGGCTGCTCTaGAAACTATTTCTGCTTTCC +
Preference number: 2 (lower is better)
Translates to: VVENMSGFICPKCKVRARIGRLL*KLFLLS
Trigger: GGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGAT...ACGCGCCCTCACCTTGCACTTAGGACAGATGAAGCCACTCATGTTCTCCACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR GCA 90 bp CCATCTATAGATGGTCCGAGGAAGGCCGCAGCCACTGGTTATGAGCAAGATGGGATCGGAAGGCTGCTCTaGAAACTATTTCTGCTTTCC +
Preference number: 2 (lower is better)
Translates to: PSIDGPRKAAATGYEQDGIGRLL*KLFLLS
Trigger: GGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGAT...CCCATCTTGCTCATAACCAGTGGCTGCGGCCTTCCTCGGACCATCTATAGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR-3UTR GCA 90 bp ATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGCACAGACATTCCCAAACGATCGGAAGGCTaGTCTGCAAACTATTTCTGC +
Preference number: 2 (lower is better)
Translates to: MIADPLHCSHPLGCTDIPKRSEG*SANYFC
Trigger: GCAGAAATAGTTTGCAGAGCAGCCTTCCGATCGTTT...GGGAATGTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR GCA 90 bp GCACAGACATTCCCTTTCTCGCACTTTGATGCTGGAATCACTGGTCTTTTCACCTTCATCTGTCCTAAGTaGAAGGTGAGGGCGCGTGGG +
Preference number: 2 (lower is better)
Translates to: AQTFPFSHFDAGITGLFTFICPK*KVRARG
Trigger: CCCACGCGCCCTCACCTTGCACTTAGGACAGATGAA...GGTGAAAAGACCAGTGATTCCAGCATCAAAGTGCGAGAAAGGGAATGTCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR GCA 90 bp CAGCCATCCCCTCGGTTGCACAGACATTCCCTTTCTCGCACTTTGATGCTGGAAAAAGAAATCAACTTCTaGCGCAAGGTGAAGCTGCCC +
Preference number: 2 (lower is better)
Translates to: QPSPRLHRHSLSRTLMLEKEINF*RKVKLP
Trigger: GGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTT...TTCCAGCATCAAAGTGCGAGAAAGGGAATGTCTGTGCAACCGAGGGGATGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR CCA 90 bp AGCAGGCAGAATGTGTGTGTCATGTGCTCCCATTCGTATTTTAGGTATATGAGAGCTGGTGACCGGCCATaGGCAGTGCAGTCACTTGCC +
Preference number: 2 (lower is better)
Translates to: SRQNVCVMCSHSYFRYMRAGDRP*AVQSLA
Trigger: GGCAAGTGACTGCACTGCCCATGGCCGGTCACCAGC...TCTCATATACCTAAAATACGAATGGGAGCACATGACACACACATTCTGCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp CTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCACTCACTGGGCCATATaGGCTCCCCATCTCCCACCA +
Preference number: 2 (lower is better)
Translates to: LWRGHFLLWLKCELALCSTHWAI*APHLPP
Trigger: TGGTGGGAGATGGGGAGCCCATATGGCCCAGTGAGT...GGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp CCTTTCTCGCACTTTGATGCTGGAATCACTGGTCTTTTCACCTTCGTAGGAGGTCTGCCGAGATGGGATTaGTGGGCAGGACGTTTGTCA +
Preference number: 2 (lower is better)
Translates to: PFSHFDAGITGLFTFVGGLPRWD*WAGRLS
Trigger: TGACAAACGTCCTGCCCACCAATCCCATCTCGGCAG...ACCTCCTACGAAGGTGAAAAGACCAGTGATTCCAGCATCAAAGTGCGAGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR CCA 90 bp AGGTATTCCGGTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTACGACCAGCTCCGGGATaGGGTGGGTCACAGCAAAAG +
Preference number: 2 (lower is better)
Translates to: RYSGHFQRLRASQTQVFLRPAPG*GGSQQK
Trigger: CTTTTGCTGTGACCCACCCCATCCCGGAGCTGGTCG...TAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGACCGGAATACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
3UTR-3UTR CCA 90 bp AACGATCGGAAGGCTGCTCTGCAAACTATTTCTGCTTTCCCAGGCAGCTTTTGCCCTCTGGGGACATGGTaGCAAAGAGTTACAGATGCC +
Preference number: 2 (lower is better)
Translates to: NDRKAALQTISAFPGSFCPLGTW*QRVTDA
Trigger: GGCATCTGTAACTCTTTGCCACCATGTCCCCAGAGG...GCAAAAGCTGCCTGGGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGATCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR-3UTR TCA 90 bp CCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAAGTTGAGGAAGTTTTCCTCTTGGACTaGATTGTCTTCCGTTTGTTT +
Preference number: 2 (lower is better)
Translates to: PRLGLPCPTGRHSSEVEEVFLLD*IVFRLF
Trigger: AAACAAACGGAAGACAATTCAGTCCAAGAGGAAAAC...TTCCTCAACTTCACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR TCA 90 bp TACGGCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTTGGAAGGAAGGTCCCTaGGACCCCACTGGTCTTTTC +
Preference number: 2 (lower is better)
Translates to: YGIRPMERTFPVMAQVRIWKEGP*DPTGLF
Trigger: GAAAAGACCAGTGGGGTCTCAGGGACCTTCCTTCCA...AATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGCCGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR TCA 90 bp TCTGGAAAGACACCTAGAACACTAGTAGCCCTTTTCGGACTTGGCCTTTTATGCTGGAAGGAAGGTCCCTaGGACCCCACTGGTCTTTTC +
Preference number: 2 (lower is better)
Translates to: SGKTPRTLVALFGLGLLCWKEGP*DPTGLF
Trigger: GAAAAGACCAGTGGGGTCTCAGGGACCTTCCTTCCA...GCATAAAAGGCCAAGTCCGAAAAGGGCTACTAGTGTTCTAGGTGTCTTTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR GCA 90 bp GCACGGAAAGAGCCCCAAGATCTTGTGGCCATTCTGTTTTCCTCTTGGACTGAATCCATGAGTACTAAATaGAGATGCCTGTGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: ARKEPQDLVAILFSSWTESMSTK*RCLWGR
Trigger: CCTGCCCCACAGGCATCTGCATTTAGTACTCATGGA...TTCAGTCCAAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTTTCCGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR GCA 90 bp TCCTGGGCCCATGTGGAAGCTGCTGAATCAGTTCTCTGTAGGGCCCTGGAACCTAATGTGTGTGTCATGTaGTCCCATTCGTATTTTAGG +
Preference number: 2 (lower is better)
Translates to: SWAHVEAAESVLCRALEPNVCVM*SHSYFR
Trigger: CCTAAAATACGAATGGGAGCACATGACACACACATT...AGGTTCCAGGGCCCTACAGAGAACTGATTCAGCAGCTTCCACATGGGCCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR GCA 90 bp GTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTATGGAACTAGCGCCACAGTTCAGCTCTaGCGAGATGGGATTGGTGGG +
Preference number: 2 (lower is better)
Translates to: VTFKDSGHHRHRSFYGTSATVQL*RDGIGG
Trigger: CCCACCAATCCCATCTCGGCAGAGCTGAACTGTGGC...GCTAGTTCCATAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR-3UTR GCA 90 bp TGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCCTGCAGCCAGAAGATTCGTaGTTCAGCTTCTGTGGCAGC +
Preference number: 2 (lower is better)
Translates to: WRGHFLLWLKCELALCSLQPEDS*FSFCGS
Trigger: GCTGCCACAGAAGCTGAAGCACGAATCTTCTGGCTG...CAGGGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573360.5
3UTR-3UTR CCA 90 bp TGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCCTGACTCCTGGGCCCATGTaGAAGCTGCTGAATCAGTTC +
Preference number: 2 (lower is better)
Translates to: WRGHFLLWLKCELALCSLTPGPM*KLLNQF
Trigger: GAACTGATTCAGCAGCTTCCACATGGGCCCAGGAGT...CAGGGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp CTACTTTGTTCTTCATTACGAGTGAAGCGGGCTCAAGATCTTCCCATTGTCACCTGCATAGGAGGGGACTaGAACAATGGCCACATGGCG +
Preference number: 2 (lower is better)
Translates to: LLCSSLRVKRAQDLPIVTCIGGD*NNGHMA
Trigger: CGCCATGTGGCCATTGTTCCAGTCCCCTCCTATGCA...GGTGACAATGGGAAGATCTTGAGCCCGCTTCACTCGTAATGAAGAACAAAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp TGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCCTGCTGTCCACCTGGCTCTaGGATAACATGGTCCTAGAG +
Preference number: 2 (lower is better)
Translates to: WRGHFLLWLKCELALCSLLSTWL*DNMVLE
Trigger: CTCTAGGACCATGTTATCCCAGAGCCAGGTGGACAG...CAGGGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp CCCTCGGTTGCACAGACATTCCCTTTCTCGCACTTTGATGCTGGAATCACTGGTATGAATGGATGTGATTaGGGACAGGAGCTTGCAGCA +
Preference number: 2 (lower is better)
Translates to: PSVAQTFPFSHFDAGITGMNGCD*GQELAA
Trigger: TGCTGCAAGCTCCTGTCCCCAATCACATCCATTCAT...ACCAGTGATTCCAGCATCAAAGTGCGAGAAAGGGAATGTCTGTGCAACCGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR CCA 90 bp CAAACCCTATCAGGGCAGAAACCTCTAAGGCTTTATGATCGCAGATCCACTGCAAGGCAGCTTTTGCAGTaGCCGGAAGTGGTGATGAGA +
Preference number: 2 (lower is better)
Translates to: QTLSGQKPLRLYDRRSTARQLLQ*PEVVMR
Trigger: TCTCATCACCACTTCCGGCCACTGCAAAAGCTGCCT...TGCAGTGGATCTGCGATCATAAAGCCTTAGAGGTTTCTGCCCTGATAGGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR TCA 90 bp TACGGCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTTGGACCCTATTTTCCTaGCTCACTGGGCCATATGGG +
Preference number: 2 (lower is better)
Translates to: YGIRPMERTFPVMAQVRIWTLFS*LTGPYG
Trigger: CCCATATGGCCCAGTGAGTCAGGAAAATAGGGTCCA...AATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGCCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR GCA 90 bp GGCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCAGTACTAAATGCAGATaGCTGTGGGGCAGGAAGCAA +
Preference number: 2 (lower is better)
Translates to: GIRPMERTFPVMAQVRIGSTKCR*LWGRKQ
Trigger: TTGCTTCCTGCCCCACAGGCATCTGCATTTAGTACT...GCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR GCA 90 bp TATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCCAGAGAAACCTGGGTGTaGATAGGAGGGGACTGGAAC +
Preference number: 2 (lower is better)
Translates to: YGEDISCYGSSANWPYVPRETWV*IGGDWN
Trigger: GTTCCAGTCCCCTCCTATGCACACCCAGGTTTCTCT...GGGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR GCA 90 bp CCTCTAAGGCTTTATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGTCTGCAAACTATTTCTaGTTTCCCAGGCAGCTTTTG +
Preference number: 2 (lower is better)
Translates to: PLRLYDRRSTALQPSPRLSANYF*FPRQLL
Trigger: CAAAAGCTGCCTGGGAAAGCAGAAATAGTTTGCAGA...CAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAAGCCTTAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR CCA 90 bp AGGTATTCCGGTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTATCCTCCATCTATAGATaGTCCGAGGAAGGCCGCAGC +
Preference number: 2 (lower is better)
Translates to: RYSGHFQRLRASQTQVFLSSIYR*SEEGRS
Trigger: GCTGCGGCCTTCCTCGGACCATCTATAGATGGAGGA...TAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGACCGGAATACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
ENST00000649981.1
3UTR-3UTR CCA 90 bp CTACTTTGTTCTTCATTACGAGTGAAGCGGGCTCAAGATCTTCCCATTGTCACCACTCCTGGGCCCATGTaGAAGCTGCTGAATCAGTTC +
Preference number: 2 (lower is better)
Translates to: LLCSSLRVKRAQDLPIVTTPGPM*KLLNQF
Trigger: GAACTGATTCAGCAGCTTCCACATGGGCCCAGGAGT...GGTGACAATGGGAAGATCTTGAGCCCGCTTCACTCGTAATGAAGAACAAAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp CCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAAGTTGAGGAACCAGCACAGATGACCTaGAAGATAAAATTATACACA +
Preference number: 2 (lower is better)
Translates to: PRLGLPCPTGRHSSEVEEPAQMT*KIKLYT
Trigger: TGTGTATAATTTTATCTTCCAGGTCATCTGTGCTGG...TTCCTCAACTTCACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp TACGGCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGACCAGATGCTGGTGTaGTCCGAAGCCACTTTCTCA +
Preference number: 2 (lower is better)
Translates to: YGIRPMERTFPVMAQVRIDQMLV*SEATFS
Trigger: TGAGAAAGTGGCTTCGGACCACACCAGCATCTGGTC...AATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGCCGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
3UTR-3UTR CCA 90 bp CTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCGTTAGCGTGGCTCAATaGAATGTTCTCCCCGGTGCA +
Preference number: 2 (lower is better)
Translates to: LWRGHFLLWLKCELALCSVSVAQ*NVLPGA
Trigger: TGCACCGGGGAGAACATTCCATTGAGCCACGCTAAC...GGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573360.5
3UTR-3UTR TCA 90 bp AAGACTCAGGGCATCACAGACACAGGTCTTTTTATGGAACTAGCCAGAGGATTCGCAAGATGGGTAGTGTaGGGTATTCCGGTCACTTTC +
Preference number: 2 (lower is better)
Translates to: KTQGITDTGLFMELARGFARWVV*GIPVTF
Trigger: GAAAGTGACCGGAATACCTCACACTACCCATCTTGC...GAATCCTCTGGCTAGTTCCATAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
ENST00000649981.1
3UTR-3UTR TCA 90 bp GGCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCAACCTCATCAGTTCCTaGAACGAGAGAATGTTCAGG +
Preference number: 2 (lower is better)
Translates to: GIRPMERTFPVMAQVRIGNLISS*NERMFR
Trigger: CCTGAACATTCTCTCGTTTCAGGAACTGATGAGGTT...GCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
3UTR-3UTR TCA 90 bp TTTGTTAAAGCTGTGGTCTCTGAGTTTGTGGCTGGGTTTTACTTGCCTAGAAGATCTCCCCGGTGCATATaGCGCAGAAACTCAGGCTGT +
Preference number: 2 (lower is better)
Translates to: FVKAVVSEFVAGFYLPRRSPRCI*RRNSGC
Trigger: ACAGCCTGAGTTTCTGCGTCATATGCACCGGGGAGA...TCTTCTAGGCAAGTAAAACCCAGCCACAAACTCAGAGACCACAGCTTTAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573360.5
3UTR-3UTR GCA 90 bp CTACTTTGTTCTTCATTACGAGTGAAGCGGGCTCAAGATCTTCCCATTGTCACCTCCATGAGTACTAAATaGAGATGCCTGTGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: LLCSSLRVKRAQDLPIVTSMSTK*RCLWGR
Trigger: CCTGCCCCACAGGCATCTGCATTTAGTACTCATGGA...GGTGACAATGGGAAGATCTTGAGCCCGCTTCACTCGTAATGAAGAACAAAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR GCA 90 bp CTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCTCCATGAGTACTAAATaGAGATGCCTGTGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: LWRGHFLLWLKCELALCSSMSTK*RCLWGR
Trigger: CCTGCCCCACAGGCATCTGCATTTAGTACTCATGGA...GGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR GCA 90 bp GGAATCACTGGTCTTTTCACCTTCGTAGGAGGTGTCACTCCAGGATGTCCGGAATCTGCAAACTATTTCTaGTTTCCCAGGCAGCTTTTG +
Preference number: 2 (lower is better)
Translates to: GITGLFTFVGGVTPGCPESANYF*FPRQLL
Trigger: CAAAAGCTGCCTGGGAAAGCAGAAATAGTTTGCAGA...TTCCGGACATCCTGGAGTGACACCTCCTACGAAGGTGAAAAGACCAGTGATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR GCA 90 bp TTCCGGTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTATGGAAGGGATCGTGGGATTCTaGTGTGTCGGAAGCTTAGTC +
Preference number: 2 (lower is better)
Translates to: FRSLSKTQGITDTGLFMEGIVGF*CVGSLV
Trigger: GACTAAGCTTCCGACACAGCAGAATCCCACGATCCC...TTCCATAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGACCGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
3UTR-3UTR CCA 90 bp TTCAGAGTAAGTATTTCCATGAGTACTAAATGCAGATGCCTGTGGGGCAGGAAGTGGGTTGTGGGATCGTaGGATTCTGCTGTGTCGGAA +
Preference number: 2 (lower is better)
Translates to: FRVSISMSTKCRCLWGRKWVVGS*DSAVSE
Trigger: TTCCGACACAGCAGAATCCCACGATCCCACAACCCA...CTTCCTGCCCCACAGGCATCTGCATTTAGTACTCATGGAAATACTTACTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
3UTR-3UTR CCA 90 bp AGGTATTCCGGTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTATGGGTTGTGGGATCGTaGGATTCTGCTGTGTCGGAA +
Preference number: 2 (lower is better)
Translates to: RYSGHFQRLRASQTQVFLWVVGS*DSAVSE
Trigger: TTCCGACACAGCAGAATCCCACGATCCCACAACCCA...TAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGACCGGAATACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
3UTR-3UTR TCA 90 bp GAGGTGTCAGTGTTTGTTAAAGCTGTGGTCTCTGAGTTTGTGGCTGGGTTTTACCGGTCATCTTTGAAGTaGAACGTGACAGCAGTCACT +
Preference number: 2 (lower is better)
Translates to: EVSVFVKAVVSEFVAGFYRSSLK*NVTAVT
Trigger: AGTGACTGCTGTCACGTTTCACTTCAAAGATGACCG...GTAAAACCCAGCCACAAACTCAGAGACCACAGCTTTAACAAACACTGACACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573360.5
3UTR-3UTR GCA 90 bp AGCAAGATGGGTAGTGTGAGGTATTCCGGTCACTTTCAAAGACTCAGGGCATCAGCCATTAGCACTCTATaGCTGTCGTCTTGTTTTCCA +
Preference number: 2 (lower is better)
Translates to: SKMGSVRYSGHFQRLRASAISTL*LSSCFP
Trigger: TGGAAAACAAGACGACAGGCATAGAGTGCTAATGGC...TGATGCCCTGAGTCTTTGAAAGTGACCGGAATACCTCACACTACCCATCTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
ENST00000649981.1
3UTR-3UTR GCA 90 bp CAAACCCTATCAGGGCAGAAACCTCTAAGGCTTTATGATCGCAGATCCACTGCAGCCATTAGCACTCTATaGCTGTCGTCTTGTTTTCCA +
Preference number: 2 (lower is better)
Translates to: QTLSGQKPLRLYDRRSTAAISTL*LSSCFP
Trigger: TGGAAAACAAGACGACAGGCATAGAGTGCTAATGGC...TGCAGTGGATCTGCGATCATAAAGCCTTAGAGGTTTCTGCCCTGATAGGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR-3UTR CCA 90 bp TTTCTACTTTGTTCTTCATTACGAGTGAAGCGGGCTCAAGATCTTCCCATTGTCGTCTGGAACACTGTCTaGGACAGGAAACTGGCTGTG +
Preference number: 2 (lower is better)
Translates to: FLLCSSLRVKRAQDLPIVVWNTV*DRKLAV
Trigger: CACAGCCAGTTTCCTGTCCCAGACAGTGTTCCAGAC...GACAATGGGAAGATCTTGAGCCCGCTTCACTCGTAATGAAGAACAAAGTAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573360.5
3UTR-3UTR TCA 90 bp TGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCCTGTTTCTGTACACCACCTaGTTATTTAGCCACGCTGAA +
Preference number: 2 (lower is better)
Translates to: WRGHFLLWLKCELALCSLFLYTT*LFSHAE
Trigger: TTCAGCGTGGCTAAATAATCAGGTGGTGTACAGAAA...CAGGGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR GCA 90 bp CTACTTTGTTCTTCATTACGAGTGAAGCGGGCTCAAGATCTTCCCATTGTCACCGCCATTAGCACTCTATaGCTGTCGTCTTGTTTTCCA +
Preference number: 2 (lower is better)
Translates to: LLCSSLRVKRAQDLPIVTAISTL*LSSCFP
Trigger: TGGAAAACAAGACGACAGGCATAGAGTGCTAATGGC...GGTGACAATGGGAAGATCTTGAGCCCGCTTCACTCGTAATGAAGAACAAAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp CTACTTTGTTCTTCATTACGAGTGAAGCGGGCTCAAGATCTTCCCATTGTCACCAAATGCAGATGCCTGTaGGGCAGGAAGCAACATAAA +
Preference number: 2 (lower is better)
Translates to: LLCSSLRVKRAQDLPIVTKCRCL*GRKQHK
Trigger: TTTATGTTGCTTCCTGCCCCACAGGCATCTGCATTT...GGTGACAATGGGAAGATCTTGAGCCCGCTTCACTCGTAATGAAGAACAAAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp CTACTTTGTTCTTCATTACGAGTGAAGCGGGCTCAAGATCTTCCCATTGTCACCTCCCTGAGACCCCACTaGTCTTTTCTACTTTGTTCT +
Preference number: 2 (lower is better)
Translates to: LLCSSLRVKRAQDLPIVTSLRPH*SFLLCS
Trigger: AGAACAAAGTAGAAAAGACCAGTGGGGTCTCAGGGA...GGTGACAATGGGAAGATCTTGAGCCCGCTTCACTCGTAATGAAGAACAAAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp CTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCAAAACAAATGGGTTGTaGGATCGTGGGATTCTGCTG +
Preference number: 2 (lower is better)
Translates to: LWRGHFLLWLKCELALCSKTNGL*DRGILL
Trigger: CAGCAGAATCCCACGATCCCACAACCCATTTGTTTT...GGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
3UTR-3UTR CCA 90 bp TTTCTACTTTGTTCTTCATTACGAGTGAAGCGGGCTCAAGATCTTCCCATTGTCAAAAGGACCAGATGCTaGTGTGGTCCGAAGCCACTT +
Preference number: 2 (lower is better)
Translates to: FLLCSSLRVKRAQDLPIVKRTRC*CGPKPL
Trigger: AAGTGGCTTCGGACCACACCAGCATCTGGTCCTTTT...GACAATGGGAAGATCTTGAGCCCGCTTCACTCGTAATGAAGAACAAAGTAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
3UTR-3UTR GCA 90 bp TTCAGAGTAAGTATTTCCATGAGTACTAAATGCAGATGCCTGTGGGGCAGGAAGTGCCAATGTCACTGTTaGCTCCCATCTTACAAAGGA +
Preference number: 2 (lower is better)
Translates to: FRVSISMSTKCRCLWGRKCQCHC*LPSYKG
Trigger: TCCTTTGTAAGATGGGAGGCAACAGTGACATTGGCA...CTTCCTGCCCCACAGGCATCTGCATTTAGTACTCATGGAAATACTTACTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573360.5
3UTR-3UTR CCA 90 bp ACAGAGTTTTTGTGTTTAAATACCCTCTACTTGAGGTACGCCCTATATAAACGATCCTCCATCTATAGATaGTCCGAGGAAGGCCGCAGC +
Preference number: 2 (lower is better)
Translates to: TEFLCLNTLYLRYALYKRSSIYR*SEEGRS
Trigger: GCTGCGGCCTTCCTCGGACCATCTATAGATGGAGGA...TCGTTTATATAGGGCGTACCTCAAGTAGAGGGTATTTAAACACAAAAACTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp TTCAGAGTAAGTATTTCCATGAGTACTAAATGCAGATGCCTGTGGGGCAGGAAGTGGTCTCTGAGTTTGTaGCTGGGTTTTACTTGCCTA +
Preference number: 2 (lower is better)
Translates to: FRVSISMSTKCRCLWGRKWSLSL*LGFTCL
Trigger: TAGGCAAGTAAAACCCAGCCACAAACTCAGAGACCA...CTTCCTGCCCCACAGGCATCTGCATTTAGTACTCATGGAAATACTTACTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp TCTGGAAAGACACCTAGAACACTAGTAGCCCTTTTCGGACTTGGCCTTTTATGCTGTTTGTTAAAGCTGTaGTCTCTGAGTTTGTGGCTG +
Preference number: 2 (lower is better)
Translates to: SGKTPRTLVALFGLGLLCCLLKL*SLSLWL
Trigger: CAGCCACAAACTCAGAGACCACAGCTTTAACAAACA...GCATAAAAGGCCAAGTCCGAAAAGGGCTACTAGTGTTCTAGGTGTCTTTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp TTCCGGTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTATGGAACCTAAAGGTAAAGGTTaGGTTTTTCCACCACCAGTC +
Preference number: 2 (lower is better)
Translates to: FRSLSKTQGITDTGLFMEPKGKG*VFPPPV
Trigger: GACTGGTGGTGGAAAAACCCAACCTTTACCTTTAGG...TTCCATAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGACCGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
3UTR-3UTR TCA 90 bp CTACTTTGTTCTTCATTACGAGTGAAGCGGGCTCAAGATCTTCCCATTGTCACCGTTTTCCTCTTGGACTaGATTGTCTTCCGTTTGTTT +
Preference number: 2 (lower is better)
Translates to: LLCSSLRVKRAQDLPIVTVFLLD*IVFRLF
Trigger: AAACAAACGGAAGACAATTCAGTCCAAGAGGAAAAC...GGTGACAATGGGAAGATCTTGAGCCCGCTTCACTCGTAATGAAGAACAAAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR GCA 90 bp AGCAGGCAGAATGTGTGTGTCATGTGCTCCCATTCGTATTTTAGGTATATGAGAGCTAATCTCTTAAAATaGAGACTCCTGGGCCCATGT +
Preference number: 2 (lower is better)
Translates to: SRQNVCVMCSHSYFRYMRANLLK*RLLGPC
Trigger: ACATGGGCCCAGGAGTCTGCATTTTAAGAGATTAGC...TCTCATATACCTAAAATACGAATGGGAGCACATGACACACACATTCTGCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp ACAGAGTTTTTGTGTTTAAATACCCTCTACTTGAGGTACGCCCTATATAAACGACTGGGGGTGTTAGCGTaGCTCAATGGAATGTTCTCC +
Preference number: 2 (lower is better)
Translates to: TEFLCLNTLYLRYALYKRLGVLA*LNGMFS
Trigger: GGAGAACATTCCATTGAGCCACGCTAACACCCCCAG...TCGTTTATATAGGGCGTACCTCAAGTAGAGGGTATTTAAACACAAAAACTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000573360.5
3UTR-3UTR CCA 90 bp CCATTAGCACTCTATGCCTGTCGTCTTGTTTTCCAGGAATCCAAGAGTTTTGTATGTTTGTTAAAGCTGTaGTCTCTGAGTTTGTGGCTG +
Preference number: 2 (lower is better)
Translates to: PLALYACRLVFQESKSFVCLLKL*SLSLWL
Trigger: CAGCCACAAACTCAGAGACCACAGCTTTAACAAACA...TACAAAACTCTTGGATTCCTGGAAAACAAGACGACAGGCATAGAGTGCTAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp ACAGAGTTTTTGTGTTTAAATACCCTCTACTTGAGGTACGCCCTATATAAACGAGTGCTTCAGCTTCTGTaGCAGCAATGCTATTCGGAG +
Preference number: 2 (lower is better)
Translates to: TEFLCLNTLYLRYALYKRVLQLL*QQCYSE
Trigger: CTCCGAATAGCATTGCTGCCACAGAAGCTGAAGCAC...TCGTTTATATAGGGCGTACCTCAAGTAGAGGGTATTTAAACACAAAAACTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573360.5
3UTR-3UTR TCA 90 bp TTTCTACTTTGTTCTTCATTACGAGTGAAGCGGGCTCAAGATCTTCCCATTGTCGTTTTCCTCTTGGACTaGATTGTCTTCCGTTTGTTT +
Preference number: 2 (lower is better)
Translates to: FLLCSSLRVKRAQDLPIVVFLLD*IVFRLF
Trigger: AAACAAACGGAAGACAATTCAGTCCAAGAGGAAAAC...GACAATGGGAAGATCTTGAGCCCGCTTCACTCGTAATGAAGAACAAAGTAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CCA 90 bp ACAGAGTTTTTGTGTTTAAATACCCTCTACTTGAGGTACGCCCTATATAAACGATGTTTGTTAAAGCTGTaGTCTCTGAGTTTGTGGCTG +
Preference number: 2 (lower is better)
Translates to: TEFLCLNTLYLRYALYKRCLLKL*SLSLWL
Trigger: CAGCCACAAACTCAGAGACCACAGCTTTAACAAACA...TCGTTTATATAGGGCGTACCTCAAGTAGAGGGTATTTAAACACAAAAACTCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR TCA 90 bp ACAGAGTTTTTGTGTTTAAATACCCTCTACTTGAGGTACGCCCTATATAAACGAAACCATGTGCATTCATaGTCCTTTCACTCAAAAGCT +
Preference number: 2 (lower is better)
Translates to: TEFLCLNTLYLRYALYKRNHVHS*SFHSKA
Trigger: AGCTTTTGAGTGAAAGGATCATGAATGCACATGGTT...TCGTTTATATAGGGCGTACCTCAAGTAGAGGGTATTTAAACACAAAAACTCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR TCA 72 bp AGCGCTCTGGTGCTATGGGTCCTGGTCCCGGTGTGCTaGGGATCACAGGAAGGGCTGGCCTCAGAGCCCTGC +
Preference number: 3 (lower is better)
Translates to: SALVLWVLVPVC*GSQEGLASEPC
Trigger: GCAGGGCTCTGAGGCCAGCCCTTCCTGTGATCCTCAGCACACCGGGACCAGGACCCATAGCACCAGAGCGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR GCA 72 bp GGGGTTCACCTGAGGCTGGTGACCGGCCATGGGCAGTaGAGTCACTTGCCTGTTTCGCCAGCAGCTCAGGCC +
Preference number: 3 (lower is better)
Translates to: GVHLRLVTGHGQ*SHLPVSPAAQA
Trigger: GGCCTGAGCTGCTGGCGAAACAGGCAAGTGACTGCACTGCCCATGGCCGGTCACCAGCCTCAGGTGAACCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR CCA 72 bp GGCAGCACATCCAGCCAGACCCGACCAGCTCCGGGATaGGGTGGGTCACAGCAAAAGGACCAGATGCTGGTG +
Preference number: 3 (lower is better)
Translates to: GSTSSQTRPAPG*GGSQQKDQMLV
Trigger: CACCAGCATCTGGTCCTTTTGCTGTGACCCACCCCATCCCGGAGCTGGTCGGGTCTGGCTGGATGTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
3UTR CCA 72 bp GTTCAGGACCAAGCAGTTACCGAGCGAGGCACTCACTaGGCAGCACATCCAGCCAGACCCGACCAGCTCCGG +
Preference number: 3 (lower is better)
Translates to: VQDQAVTERGTH*AAHPARPDQLR
Trigger: CCGGAGCTGGTCGGGTCTGGCTGGATGTGCTGCCCAGTGAGTGCCTCGCTCGGTAACTGCTTGGTCCTGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
3UTR TCA 72 bp AGGCCCCTGGAGGCAGTTGGGCTGCATGAATGGATGTaGTTGGGGACAGGAGCTTGCAGCAGCCCAGGGCAC +
Preference number: 3 (lower is better)
Translates to: RPLEAVGLHEWM*LGTGACSSPGH
Trigger: GTGCCCTGGGCTGCTGCAAGCTCCTGTCCCCAATCACATCCATTCATGCAGCCCAACTGCCTCCAGGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR GCA 72 bp TTGCAGCAGCCCAGGGCACATCCATTCCTGCCAGCCTaGACCTCTGCCACAGTTCAGCTCTGCCGAGATGGG +
Preference number: 3 (lower is better)
Translates to: LQQPRAHPFLPA*TSATVQLCRDG
Trigger: CCCATCTCGGCAGAGCTGAACTGTGGCAGAGGTGCAGGCTGGCAGGAATGGATGTGCCCTGGGCTGCTGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR CCA 72 bp CCAGACCAAACCCACGTGCAGGCCACATTCAGCCAGTaGCAGCCATCAGAGGCCCCAGAGTTAGGGCAGAGG +
Preference number: 3 (lower is better)
Translates to: PDQTHVQATFSQ*QPSEAPELGQR
Trigger: CCTCTGCCCTAACTCTGGGGCCTCTGATGGCTGCCACTGGCTGAATGTGGCCTGCACGTGGGTTTGGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR CCA 72 bp AGCATGACTATTCTGGGATCCCCAACCTCCCAGGTCTaGCCCAGCGAACGTGCACTCAGGGGCCTCCCTAGC +
Preference number: 3 (lower is better)
Translates to: SMTILGSPTSQV*PSERALRGLPS
Trigger: GCTAGGGAGGCCCCTGAGTGCACGTTCGCTGGGCCAGACCTGGGAGGTTGGGGATCCCAGAATAGTCATGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR-3UTR CAA 90 bp GCTGGTGAATCTCCAGCCCCTCGAGGCCAGGCTTCTGAAAGTCACCTGGGCAGGTGGAATCCCAGCACTTaGGGTGAAGGAGGCAGGCAG +
Preference number: 3 (lower is better)
Translates to: AGESPAPRGQASESHLGRWNPST*GEGGRQ
Trigger: CTGCCTGCCTCCTTCACCCAAAGTGCTGGGATTCCA...CCTGCCCAGGTGACTTTCAGAAGCCTGGCCTCGAGGGGCTGGAGATTCACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573360.5
3UTR CCA 72 bp CCCTGGAGGCAGTTGGGCTGCATGAATGGATGTGATTaGGGACAGGAGCTTGCAGCAGCCCAGGGCACATCC +
Preference number: 3 (lower is better)
Translates to: PWRQLGCMNGCD*GQELAAAQGTS
Trigger: GGATGTGCCCTGGGCTGCTGCAAGCTCCTGTCCCCAATCACATCCATTCATGCAGCCCAACTGCCTCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR CCA 72 bp AACGTGCACTCAGGGGCCTCCCTAGCGAGTTCCACATaGTCTCATGGGCCCAGCGTTAACGGCGGAGGATGT +
Preference number: 3 (lower is better)
Translates to: NVHSGASLASST*SHGPSVNGGGC
Trigger: ACATCCTCCGCCGTTAACGCTGGGCCCATGAGACCATGTGGAACTCGCTAGGGAGGCCCCTGAGTGCACGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR CCA 72 bp GAGTTACAGATGCCAGCGCTCTGGTGCTATGGGTCCTaGTCCCGGTGTGCTGAGGATCACAGGAAGGGCTGG +
Preference number: 3 (lower is better)
Translates to: ELQMPALWCYGS*SRCAEDHRKGW
Trigger: CCAGCCCTTCCTGTGATCCTCAGCACACCGGGACCAGGACCCATAGCACCAGAGCGCTGGCATCTGTAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR-3UTR CAA 90 bp ATGAGTGGCTTCATCTGTCCTAAGTGCAAGGTGAGGGCGCGTGGGGCTGCCAGGTCTGCCGAGATGGGATaGGTGGGCAGGACGTTTGTC +
Preference number: 3 (lower is better)
Translates to: MSGFICPKCKVRARGAARSAEMG*VGRTFV
Trigger: GACAAACGTCCTGCCCACCAATCCCATCTCGGCAGA...CCTGGCAGCCCCACGCGCCCTCACCTTGCACTTAGGACAGATGAAGCCACTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR CAA 90 bp GGTGACCGGCCATGGGCAGTGCAGTCACTTGCCTGTTTCGCCAGCAGCTCAGGCTTACCACTTCAGACTTaGCTGGGGGTGTTAGCGTGG +
Preference number: 3 (lower is better)
Translates to: GDRPWAVQSLACFASSSGLPLQT*LGVLAW
Trigger: CCACGCTAACACCCCCAGCAAAGTCTGAAGTGGTAA...GCCTGAGCTGCTGGCGAAACAGGCAAGTGACTGCACTGCCCATGGCCGGTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573360.5
3UTR-3UTR CAA 90 bp ACAGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGTGGAATCCCAGCACTTaGGGTGAAGGAGGCAGGCAG +
Preference number: 3 (lower is better)
Translates to: TGFFPDLDFPVPQGDTVVWNPST*GEGGRQ
Trigger: CTGCCTGCCTCCTTCACCCAAAGTGCTGGGATTCCA...CACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CAA 90 bp GCGTGGGGCTGCCAGGCGAGCAAGATCTTGCTCTCATGGATGAGGAAACGATCGTCTGCCGAGATGGGATaGGTGGGCAGGACGTTTGTC +
Preference number: 3 (lower is better)
Translates to: AWGCQASKILLSWMRKRSSAEMG*VGRTFV
Trigger: GACAAACGTCCTGCCCACCAATCCCATCTCGGCAGA...CGATCGTTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTGGCAGCCCCACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR CAA 90 bp GCGTGGGGCTGCCAGGCGAGCAAGATCTTGCTCTCATGGATGAGGAAACGATCGTTTCCCAGGCAGCTTTaGCAGTGGCCGGAAGTGGTG +
Preference number: 3 (lower is better)
Translates to: AWGCQASKILLSWMRKRSFPRQL*QWPEVV
Trigger: CACCACTTCCGGCCACTGCAAAAGCTGCCTGGGAAA...CGATCGTTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTGGCAGCCCCACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR CAA 90 bp GTTGAGCCAGACCAAACCCACGTGCAGGCCACATTCAGCCAGTGGCAGCCATCAAGGCAGGCAGATCACTaGAGGCTGGTCAGGAGTTCA +
Preference number: 3 (lower is better)
Translates to: VEPDQTHVQATFSQWQPSRQADH*RLVRSS
Trigger: TGAACTCCTGACCAGCCTCAAGTGATCTGCCTGCCT...TGATGGCTGCCACTGGCTGAATGTGGCCTGCACGTGGGTTTGGTCTGGCTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CAA 90 bp GTGCTAGGTAGGAACCCCTCCTGGGGTTCACCTGAGGCTGGTGACCGGCCATGGAAGAGCCCCAAGATCTaGTGGCCATTCTGTTTTCCT +
Preference number: 3 (lower is better)
Translates to: VLGRNPSWGSPEAGDRPWKSPKI*WPFCFP
Trigger: AGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTT...CCATGGCCGGTCACCAGCCTCAGGTGAACCCCAGGAGGGGTTCCTACCTAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CAA 90 bp GAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCGGGGTGGTGGAGAACGGCCCCTGGAGGCAGTaGGGCTGCATGAATGGATGT +
Preference number: 3 (lower is better)
Translates to: EINFCRKVKLPIIGVVENGPWRQ*GCMNGC
Trigger: ACATCCATTCATGCAGCCCAACTGCCTCCAGGGGCC...GTTCTCCACCACCCCGATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR CAA 90 bp GGCTTTATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGCACAGACGGCCCCTGGAGGCAGTaGGGCTGCATGAATGGATGT +
Preference number: 3 (lower is better)
Translates to: GFMIADPLHCSHPLGCTDGPWRQ*GCMNGC
Trigger: ACATCCATTCATGCAGCCCAACTGCCTCCAGGGGCC...GTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR CAA 90 bp GCTGGTGAATCTCCAGCCCCTCGAGGCCAGGCTTCTGAAAGTCACCTGGGCAGGCAGGCGAGCAAGATCTaGCTCTCATGGATGAGGAAA +
Preference number: 3 (lower is better)
Translates to: AGESPAPRGQASESHLGRQASKI*LSWMRK
Trigger: TTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTG...CCTGCCCAGGTGACTTTCAGAAGCCTGGCCTCGAGGGGCTGGAGATTCACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR-3UTR CAA 90 bp GGCTTTATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGCACAGACCGCAGATCCACTGCATaGCAGCCATCCCCTCGGTTG +
Preference number: 3 (lower is better)
Translates to: GFMIADPLHCSHPLGCTDRRSTA*QPSPRL
Trigger: CAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCG...GTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR GCA 72 bp CATGGTGGCAAAGAGTTACAGATGCCAGCGCTCTGGTaGTATGGGTCCTGGTCCCGGTGTGCTGAGGATCAC +
Preference number: 3 (lower is better)
Translates to: HGGKELQMPALW*YGSWSRCAEDH
Trigger: GTGATCCTCAGCACACCGGGACCAGGACCCATAGCACCAGAGCGCTGGCATCTGTAACTCTTTGCCACCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR CCA 72 bp AGCCTGCACCTCTGCCACAGTTCAGCTCTGCCGAGATaGGATTGGTGGGCAGGACGTTTGTCAGGGGAAACA +
Preference number: 3 (lower is better)
Translates to: SLHLCHSSALPR*DWWAGRLSGET
Trigger: TGTTTCCCCTGACAAACGTCCTGCCCACCAATCCCATCTCGGCAGAGCTGAACTGTGGCAGAGGTGCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR CCA 72 bp GCGTGGGGCTGCCAGGCGAGCAAGATCTTGCTCTCATaGATGAGGAAACGATCGGAAGGCTGCTCTGCAAAC +
Preference number: 3 (lower is better)
Translates to: AWGCQASKILLS*MRKRSEGCSAN
Trigger: GTTTGCAGAGCAGCCTTCCGATCGTTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTGGCAGCCCCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR CCA 72 bp GGACATGGTGGCAAAGAGTTACAGATGCCAGCGCTCTaGTGCTATGGGTCCTGGTCCCGGTGTGCTGAGGAT +
Preference number: 3 (lower is better)
Translates to: GHGGKELQMPAL*CYGSWSRCAED
Trigger: ATCCTCAGCACACCGGGACCAGGACCCATAGCACCAGAGCGCTGGCATCTGTAACTCTTTGCCACCATGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR-3UTR CAA 90 bp GCCACATTCAGCCAGTGGCAGCCATCAGAGGCCCCAGAGTTAGGGCAGAGGTGTCTGTGGTCTCTGAGTTaGTGGCTGGGTTTTACTTGC +
Preference number: 3 (lower is better)
Translates to: ATFSQWQPSEAPELGQRCLWSLS*WLGFTC
Trigger: GCAAGTAAAACCCAGCCACAAACTCAGAGACCACAG...ACACCTCTGCCCTAACTCTGGGGCCTCTGATGGCTGCCACTGGCTGAATGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CAA 90 bp CCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAAGTTGAGGAAAGGCAGGCAGATCACTaGAGGCTGGTCAGGAGTTCA +
Preference number: 3 (lower is better)
Translates to: PRLGLPCPTGRHSSEVEERQADH*RLVRSS
Trigger: TGAACTCCTGACCAGCCTCAAGTGATCTGCCTGCCT...TTCCTCAACTTCACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CAA 90 bp CCCCACAGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAAGAGCCCCAAGATCTaGTGGCCATTCTGTTTTCCT +
Preference number: 3 (lower is better)
Translates to: PHRLLPRLGLPCPTGRHSKSPKI*WPFCFP
Trigger: AGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTT...ACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CAA 90 bp CCGGAAAGAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCGGGGTGGTTCTGCCGAGATGGGATaGGTGGGCAGGACGTTTGTC +
Preference number: 3 (lower is better)
Translates to: PERNQLLPQGEAAHHRGGSAEMG*VGRTFV
Trigger: GACAAACGTCCTGCCCACCAATCCCATCTCGGCAGA...ACCACCCCGATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR CAA 90 bp GCGTGGGGCTGCCAGGCGAGCAAGATCTTGCTCTCATGGATGAGGAAACGATCGTTACCACTTCAGACTTaGCTGGGGGTGTTAGCGTGG +
Preference number: 3 (lower is better)
Translates to: AWGCQASKILLSWMRKRSLPLQT*LGVLAW
Trigger: CCACGCTAACACCCCCAGCAAAGTCTGAAGTGGTAA...CGATCGTTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTGGCAGCCCCACGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR-3UTR CAA 90 bp GCCACATTCAGCCAGTGGCAGCCATCAGAGGCCCCAGAGTTAGGGCAGAGGTGTTGTAGCCATACAGGTTaGCAGCTTGGAGAGAGATCC +
Preference number: 3 (lower is better)
Translates to: ATFSQWQPSEAPELGQRCCSHTG*QLGERS
Trigger: GGATCTCTCTCCAAGCTGCAAACCTGTATGGCTACA...ACACCTCTGCCCTAACTCTGGGGCCTCTGATGGCTGCCACTGGCTGAATGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573360.5
3UTR TCA 72 bp CTGGGTGAAAGTCAGGGACAGAAAGTAGCCCCAGCATaGCTATTCTGGGATCCCCAACCTCCCAGGTCTGGC +
Preference number: 3 (lower is better)
Translates to: LGESQGQKVAPA*LFWDPQPPRSG
Trigger: GCCAGACCTGGGAGGTTGGGGATCCCAGAATAGTCATGCTGGGGCTACTTTCTGTCCCTGACTTTCACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR CCA 72 bp GGCATGAGGACAGCACTTCAGTCTCCTCTGGGGACATaGTGGCAAAGAGTTACAGATGCCAGCGCTCTGGTG +
Preference number: 3 (lower is better)
Translates to: GMRTALQSPLGT*WQRVTDASALV
Trigger: CACCAGAGCGCTGGCATCTGTAACTCTTTGCCACCATGTCCCCAGAGGAGACTGAAGTGCTGTCCTCATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR-3UTR CAA 90 bp ATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGCACAGACATTCCCTTTTTTCCCAGGCAGCTTTaGCAGTGGCCGGAAGTGGTG +
Preference number: 3 (lower is better)
Translates to: IADPLHCSHPLGCTDIPFFPRQL*QWPEVV
Trigger: CACCACTTCCGGCCACTGCAAAAGCTGCCTGGGAAA...AAAGGGAATGTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGAT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR CAA 90 bp GTTGAGCCAGACCAAACCCACGTGCAGGCCACATTCAGCCAGTGGCAGCCATCAATACAGGTTTGCAGCTaGGAGAGAGATCCCAGCAAC +
Preference number: 3 (lower is better)
Translates to: VEPDQTHVQATFSQWQPSIQVCS*ERDPSN
Trigger: GTTGCTGGGATCTCTCTCCAAGCTGCAAACCTGTAT...TGATGGCTGCCACTGGCTGAATGTGGCCTGCACGTGGGTTTGGTCTGGCTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573360.5
3UTR GCA 72 bp GTGTCACTCCAGGATGTCCGGAAAGAAATCAACTTCTaGCGCAAGGTGAAGCTGCCCATCATCGGGGTGGTG +
Preference number: 3 (lower is better)
Translates to: VSLQDVRKEINF*RKVKLPIIGVV
Trigger: CACCACCCCGATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTTCCGGACATCCTGGAGTGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR CCA 72 bp CGGGATGGGGTGGGTCACAGCAAAAGGACCAGATGCTaGTGTGGTCCGAAGCCACTTTCTCAGAGACACTTT +
Preference number: 3 (lower is better)
Translates to: RDGVGHSKRTRC*CGPKPLSQRHF
Trigger: AAAGTGTCTCTGAGAAAGTGGCTTCGGACCACACCAGCATCTGGTCCTTTTGCTGTGACCCACCCCATCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
3UTR-3UTR CAA 90 bp GCAGATGCCTGTGGGGCAGGAAGCAACATAAAGGAGCCAGGGGTGTGGAAGGACCAGAGGTGTCAGTGTTaGTTAAAGCTGTGGTCTCTG +
Preference number: 3 (lower is better)
Translates to: ADACGAGSNIKEPGVWKDQRCQC*LKLWSL
Trigger: CAGAGACCACAGCTTTAACAAACACTGACACCTCTG...GTCCTTCCACACCCCTGGCTCCTTTATGTTGCTTCCTGCCCCACAGGCATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CAA 90 bp GCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCGGGCAGTGCAGTCACTaGCCTGTTTCGCCAGCAGCT +
Preference number: 3 (lower is better)
Translates to: AYVLWRGHFLLWLKCELAGQCSH*PVSPAA
Trigger: AGCTGCTGGCGAAACAGGCAAGTGACTGCACTGCCC...GGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CAA 90 bp CGCAAGGTGAAGCTGCCCATCATCGGGGTGGTGGAGAACATGAGTGGCTTCATCCAGGCGAGCAAGATCTaGCTCTCATGGATGAGGAAA +
Preference number: 3 (lower is better)
Translates to: RKVKLPIIGVVENMSGFIQASKI*LSWMRK
Trigger: TTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTG...GATGAAGCCACTCATGTTCTCCACCACCCCGATGATGGGCAGCTTCACCTTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR CAA 90 bp TCCTGGGCCCATGTGGAAGCTGCTGAATCAGTTCTCTGTAGGGCCCTGGAACCTAAACTGGCTGTGACCTaGCCAATGTCACTGTTGCCT +
Preference number: 3 (lower is better)
Translates to: SWAHVEAAESVLCRALEPKLAVT*PMSLLP
Trigger: AGGCAACAGTGACATTGGCAAGGTCACAGCCAGTTT...AGGTTCCAGGGCCCTACAGAGAACTGATTCAGCAGCTTCCACATGGGCCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573360.5
3UTR TCA 72 bp GGGGCTGCCAGGCGAGCAAGATCTTGCTCTCATGGATaGGGAAACGATCGGAAGGCTGCTCTGCAAACTATT +
Preference number: 3 (lower is better)
Translates to: GAARRARSCSHG*GNDRKAALQTI
Trigger: AATAGTTTGCAGAGCAGCCTTCCGATCGTTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTGGCAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR CCA 72 bp ATGAGGACAGCACTTCAGTCTCCTCTGGGGACATGGTaGCAAAGAGTTACAGATGCCAGCGCTCTGGTGCTA +
Preference number: 3 (lower is better)
Translates to: MRTALQSPLGTW*QRVTDASALVL
Trigger: TAGCACCAGAGCGCTGGCATCTGTAACTCTTTGCCACCATGTCCCCAGAGGAGACTGAAGTGCTGTCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR-3UTR CAA 90 bp TGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCCTGTTGACCCCTAGCCCCTaGTGTCCTGTCCACCTGGCT +
Preference number: 3 (lower is better)
Translates to: WRGHFLLWLKCELALCSLLTPSP*CPVHLA
Trigger: AGCCAGGTGGACAGGACACAAGGGGCTAGGGGTCAA...CAGGGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CAA 90 bp GCACGGAAAGAGCCCCAAGATCTTGTGGCCATTCTGTTTTCCTCTTGGACTGAACAGCCCACAAAGCTCTaGCTGAACCAGTCGCAGCTC +
Preference number: 3 (lower is better)
Translates to: ARKEPQDLVAILFSSWTEQPTKL*LNQSQL
Trigger: GAGCTGCGACTGGTTCAGCAAGAGCTTTGTGGGCTG...TTCAGTCCAAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTTTCCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573360.5
3UTR TCA 72 bp CCAAACCCTATCAGGGCAGAAACCTCTAAGGCTTTATaGTCGCAGATCCACTGCATTGCAGCCATCCCCTCG +
Preference number: 3 (lower is better)
Translates to: PNPIRAETSKAL*SQIHCIAAIPS
Trigger: CGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAAGCCTTAGAGGTTTCTGCCCTGATAGGGTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR TCA 72 bp TCACTTGCCCTCTTCGAAACACGGTCATCTTTGAAGTaGAACGTGACAGCAGTCACTGCCTTCCCGCCTAGC +
Preference number: 3 (lower is better)
Translates to: SLALFETRSSLK*NVTAVTAFPPS
Trigger: GCTAGGCGGGAAGGCAGTGACTGCTGTCACGTTTCACTTCAAAGATGACCGTGTTTCGAAGAGGGCAAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
3UTR TCA 72 bp AGGGGAAACATCTTCCTAGGAACAGACAGGAAGGCATaGGGACAGCACTTCAGTCTCCTCTGGGGACATGGT +
Preference number: 3 (lower is better)
Translates to: RGNIFLGTDRKA*GQHFSLLWGHG
Trigger: ACCATGTCCCCAGAGGAGACTGAAGTGCTGTCCTCATGCCTTCCTGTCTGTTCCTAGGAAGATGTTTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR GCA 72 bp AGGAAACGATCGGAAGGCTGCTCTGCAAACTATTTCTaGTTTCCCAGGCAGCTTTTGCAGTGGCCGGAAGTG +
Preference number: 3 (lower is better)
Translates to: RKRSEGCSANYF*FPRQLLQWPEV
Trigger: CACTTCCGGCCACTGCAAAAGCTGCCTGGGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGATCGTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR GCA 72 bp CATGGGGCAGATTATGAGGCCCAGCCAGAAGATTCGTaGTTCAGCTTCTGTGGCAGCAATGCTATTCGGAGA +
Preference number: 3 (lower is better)
Translates to: HGADYEAQPEDS*FSFCGSNAIRR
Trigger: TCTCCGAATAGCATTGCTGCCACAGAAGCTGAAGCACGAATCTTCTGGCTGGGCCTCATAATCTGCCCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
3UTR GCA 72 bp GCCTCCCATCTTACAAAGGATGTAGCCATACAGGTTTaGAGCTTGGAGAGAGATCCCAGCAACCACCAGAGC +
Preference number: 3 (lower is better)
Translates to: ASHLTKDVAIQV*SLERDPSNHQS
Trigger: GCTCTGGTGGTTGCTGGGATCTCTCTCCAAGCTGCAAACCTGTATGGCTACATCCTTTGTAAGATGGGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573360.5
3UTR CCA 72 bp CCTTTACCACTTCAGACTTTGCTGGGGGTGTTAGCGTaGCTCAATGGAATGTTCTCCCCGGTGCATATGACG +
Preference number: 3 (lower is better)
Translates to: PLPLQTLLGVLA*LNGMFSPVHMT
Trigger: CGTCATATGCACCGGGGAGAACATTCCATTGAGCCACGCTAACACCCCCAGCAAAGTCTGAAGTGGTAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
3UTR-3UTR CAA 90 bp CCCACAGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAAAAATAAAAACTTTGTaGAGCCAGACCAAACCCACG +
Preference number: 3 (lower is better)
Translates to: PTGFFPDLDFPVPQGDTVKIKTL*SQTKPT
Trigger: CGTGGGTTTGGTCTGGCTCAACAAAGTTTTTATTTT...TACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCTGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CAA 90 bp GGCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCAGGCAGGCAGATCACTaGAGGCTGGTCAGGAGTTCA +
Preference number: 3 (lower is better)
Translates to: GIRPMERTFPVMAQVRIGRQADH*RLVRSS
Trigger: TGAACTCCTGACCAGCCTCAAGTGATCTGCCTGCCT...GCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CAA 90 bp CTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCGGGCAGTGCAGTCACTaGCCTGTTTCGCCAGCAGCT +
Preference number: 3 (lower is better)
Translates to: LWRGHFLLWLKCELALCSGQCSH*PVSPAA
Trigger: AGCTGCTGGCGAAACAGGCAAGTGACTGCACTGCCC...GGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CAA 90 bp CAAGGTGAAGCTGCCCATCATCGGGGTGGTGGAGAACATGAGTGGCTTCATCTGGACTCCAAATATCACTaGCCCTCTTCGAAACACGGT +
Preference number: 3 (lower is better)
Translates to: QGEAAHHRGGGEHEWLHLDSKYH*PSSKHG
Trigger: ACCGTGTTTCGAAGAGGGCAAGTGATATTTGGAGTC...CAGATGAAGCCACTCATGTTCTCCACCACCCCGATGATGGGCAGCTTCACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR TCA 72 bp CCTCCCCTTCGAAGAATCCAGTACTTTCCCGCCACTTaGCTCCAAATATCACTTGCCCTCTTCGAAACACGG +
Preference number: 3 (lower is better)
Translates to: PPLRRIQYFPAT*LQISLALFETR
Trigger: CCGTGTTTCGAAGAGGGCAAGTGATATTTGGAGTCAAGTGGCGGGAAAGTACTGGATTCTTCGAAGGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
3UTR GCA 72 bp GTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTaGGAATTGGCCTTATGTTCCCTGCCTCTGGACCCT +
Preference number: 3 (lower is better)
Translates to: VLWRGHFLLWLK*ELALCSLPLDP
Trigger: AGGGTCCAGAGGCAGGGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR GCA 72 bp GCCAGAAGATTCGTGCTTCAGCTTCTGTGGCAGCAATaGTATTCGGAGAGACCTTCCTGGCTTCAAAGATCC +
Preference number: 3 (lower is better)
Translates to: ARRFVLQLLWQQ*YSERPSWLQRS
Trigger: GGATCTTTGAAGCCAGGAAGGTCTCTCCGAATAGCATTGCTGCCACAGAAGCTGAAGCACGAATCTTCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
3UTR CCA 72 bp ACTTCAGACTTTGCTGGGGGTGTTAGCGTGGCTCAATaGAATGTTCTCCCCGGTGCATATGACGCAGAAACT +
Preference number: 3 (lower is better)
Translates to: TSDFAGGVSVAQ*NVLPGAYDAET
Trigger: AGTTTCTGCGTCATATGCACCGGGGAGAACATTCCATTGAGCCACGCTAACACCCCCAGCAAAGTCTGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
3UTR-3UTR CAA 90 bp AACGATCGGAAGGCTGCTCTGCAAACTATTTCTGCTTTCCCAGGCAGCTTTTGCTCCCTTTCTCGCACTTaGATGCTGGAATCACTGGTC +
Preference number: 3 (lower is better)
Translates to: NDRKAALQTISAFPGSFCSLSRT*MLESLV
Trigger: GACCAGTGATTCCAGCATCAAAGTGCGAGAAAGGGA...GCAAAAGCTGCCTGGGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGATCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR GCA 72 bp GCTCTCATGGATGAGGAAACGATCGGAAGGCTGCTCTaGAAACTATTTCTGCTTTCCCAGGCAGCTTTTGCA +
Preference number: 3 (lower is better)
Translates to: ALMDEETIGRLL*KLFLLSQAAFA
Trigger: TGCAAAAGCTGCCTGGGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGATCGTTTCCTCATCCATGAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR-3UTR CAA 90 bp TTTCTACTTTGTTCTTCATTACGAGTGAAGCGGGCTCAAGATCTTCCCATTGTCTGGAATCCCAGCACTTaGGGTGAAGGAGGCAGGCAG +
Preference number: 3 (lower is better)
Translates to: FLLCSSLRVKRAQDLPIVWNPST*GEGGRQ
Trigger: CTGCCTGCCTCCTTCACCCAAAGTGCTGGGATTCCA...GACAATGGGAAGATCTTGAGCCCGCTTCACTCGTAATGAAGAACAAAGTAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR GCA 72 bp GGGCTGTCAAGGGGTAGACAAGCCATTAGCACTCTATaGCTGTCGTCTTGTTTTCCAGGAATCCAAGAGTTT +
Preference number: 3 (lower is better)
Translates to: GLSRGRQAISTL*LSSCFPGIQEF
Trigger: AAACTCTTGGATTCCTGGAAAACAAGACGACAGGCATAGAGTGCTAATGGCTTGTCTACCCCTTGACAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
ENST00000649981.1
3UTR CCA 72 bp GTAAGTATTTCCATGAGTACTAAATGCAGATGCCTGTaGGGCAGGAAGCAACATAAAGGAGCCAGGGGTGTG +
Preference number: 3 (lower is better)
Translates to: VSISMSTKCRCL*GRKQHKGARGV
Trigger: CACACCCCTGGCTCCTTTATGTTGCTTCCTGCCCCACAGGCATCTGCATTTAGTACTCATGGAAATACTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR CCA 72 bp AGGGATTTATTGAAAATGAAAGTCAACTCCACGGTGTaGGAGGAGAACGGGCCTGAGAATAGGGGCTCAAAG +
Preference number: 3 (lower is better)
Translates to: RDLLKMKVNSTV*EENGPENRGSK
Trigger: CTTTGAGCCCCTATTCTCAGGCCCGTTCTCCTCCCACACCGTGGAGTTGACTTTCATTTTCAATAAATCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CAA 90 bp CTACTTTGTTCTTCATTACGAGTGAAGCGGGCTCAAGATCTTCCCATTGTCACCCTCAAGATCTTCCCATaGTCACCAGCACGGAAAGAG +
Preference number: 3 (lower is better)
Translates to: LLCSSLRVKRAQDLPIVTLKIFP*SPARKE
Trigger: CTCTTTCCGTGCTGGTGACAATGGGAAGATCTTGAG...GGTGACAATGGGAAGATCTTGAGCCCGCTTCACTCGTAATGAAGAACAAAGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CAA 90 bp TTCAGAGTAAGTATTTCCATGAGTACTAAATGCAGATGCCTGTGGGGCAGGAAGCTGTGGTCTCTGAGTTaGTGGCTGGGTTTTACTTGC +
Preference number: 3 (lower is better)
Translates to: FRVSISMSTKCRCLWGRKLWSLS*WLGFTC
Trigger: GCAAGTAAAACCCAGCCACAAACTCAGAGACCACAG...CTTCCTGCCCCACAGGCATCTGCATTTAGTACTCATGGAAATACTTACTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CAA 90 bp TACGGCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTAAGAGCCCCAAGATCTaGTGGCCATTCTGTTTTCCT +
Preference number: 3 (lower is better)
Translates to: YGIRPMERTFPVMAQVRIKSPKI*WPFCFP
Trigger: AGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTT...AATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGCCGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CAA 90 bp CTACTTTGTTCTTCATTACGAGTGAAGCGGGCTCAAGATCTTCCCATTGTCACCGTACTTTCCCGCCACTaGACTCCAAATATCACTTGC +
Preference number: 3 (lower is better)
Translates to: LLCSSLRVKRAQDLPIVTVLSRH*TPNITC
Trigger: GCAAGTGATATTTGGAGTCAAGTGGCGGGAAAGTAC...GGTGACAATGGGAAGATCTTGAGCCCGCTTCACTCGTAATGAAGAACAAAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573360.5
3UTR-3UTR CAA 90 bp TTCCGGTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTATGGAACAGAGGTGTCAGTGTTaGTTAAAGCTGTGGTCTCTG +
Preference number: 3 (lower is better)
Translates to: FRSLSKTQGITDTGLFMEQRCQC*LKLWSL
Trigger: CAGAGACCACAGCTTTAACAAACACTGACACCTCTG...TTCCATAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGACCGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CAA 90 bp GCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCAAAATAAAAACTTTGTaGAGCCAGACCAAACCCACG +
Preference number: 3 (lower is better)
Translates to: AYVLWRGHFLLWLKCELAKIKTL*SQTKPT
Trigger: CGTGGGTTTGGTCTGGCTCAACAAAGTTTTTATTTT...GGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CAA 90 bp TTCCGGTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTATGGAAGACTCCAAATATCACTaGCCCTCTTCGAAACACGGT +
Preference number: 3 (lower is better)
Translates to: FRSLSKTQGITDTGLFMEDSKYH*PSSKHG
Trigger: ACCGTGTTTCGAAGAGGGCAAGTGATATTTGGAGTC...TTCCATAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGACCGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
3UTR-3UTR CAA 90 bp TTCCGGTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTATGGAAGTACTTTCCCGCCACTaGACTCCAAATATCACTTGC +
Preference number: 3 (lower is better)
Translates to: FRSLSKTQGITDTGLFMEVLSRH*TPNITC
Trigger: GCAAGTGATATTTGGAGTCAAGTGGCGGGAAAGTAC...TTCCATAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGACCGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
3UTR TCA 72 bp CTCCATCAGTCAAAAGAAGAGAACCTCATCAGTTCCTaGAACGAGAGAATGTTCAGGACCAAGCAGTTACCG +
Preference number: 3 (lower is better)
Translates to: LHQSKEENLISS*NERMFRTKQLP
Trigger: CGGTAACTGCTTGGTCCTGAACATTCTCTCGTTTCAGGAACTGATGAGGTTCTCTTCTTTTGACTGATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
3UTR-3UTR CAA 90 bp TTTGTTAAAGCTGTGGTCTCTGAGTTTGTGGCTGGGTTTTACTTGCCTAGAAGACAGAGGTGTCAGTGTTaGTTAAAGCTGTGGTCTCTG +
Preference number: 3 (lower is better)
Translates to: FVKAVVSEFVAGFYLPRRQRCQC*LKLWSL
Trigger: CAGAGACCACAGCTTTAACAAACACTGACACCTCTG...TCTTCTAGGCAAGTAAAACCCAGCCACAAACTCAGAGACCACAGCTTTAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CAA 90 bp ACAGAGTTTTTGTGTTTAAATACCCTCTACTTGAGGTACGCCCTATATAAACGAAGGCAGGCAGATCACTaGAGGCTGGTCAGGAGTTCA +
Preference number: 3 (lower is better)
Translates to: TEFLCLNTLYLRYALYKRRQADH*RLVRSS
Trigger: TGAACTCCTGACCAGCCTCAAGTGATCTGCCTGCCT...TCGTTTATATAGGGCGTACCTCAAGTAGAGGGTATTTAAACACAAAAACTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR TCA 72 bp GGAACTGTCAAACACTTACAAAACCATCAGATCTCGTaGAAACTCACTATCGAGACCAGCATGGGGGAAACT +
Preference number: 3 (lower is better)
Translates to: GTVKHLQNHQIS*KLTIETSMGET
Trigger: AGTTTCCCCCATGCTGGTCTCGATAGTGAGTTTTCACGAGATCTGATGGTTTTGTAAGTGTTTGACAGTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR CCA 72 bp AGTAAAGTTACAAAGTCATTTACGGCATACGTCCTATaGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAA +
Preference number: 3 (lower is better)
Translates to: SKVTKSFTAYVL*RGHFLLWLKCE
Trigger: TTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGCCGTAAATGACTTTGTAACTTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR-3UTR CAA 90 bp AGCAGGCAGAATGTGTGTGTCATGTGCTCCCATTCGTATTTTAGGTATATGAGAAAAATAAAAACTTTGTaGAGCCAGACCAAACCCACG +
Preference number: 3 (lower is better)
Translates to: SRQNVCVMCSHSYFRYMRKIKTL*SQTKPT
Trigger: CGTGGGTTTGGTCTGGCTCAACAAAGTTTTTATTTT...TCTCATATACCTAAAATACGAATGGGAGCACATGACACACACATTCTGCCTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp CTCAGGCCTGGGGAGTGGGCAGAGCAAGCTGATGGCAGGTCCACCCACGACTGGGGGGCCTGCGCCCTGTaGGGCAGCCTCAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: LRPGEWAEQADGRSTHDWGACAL*GSLSAA
Trigger: AGCTGCGCTGAGGCTGCCCCACAGGGCGCAGGCCCC...CCAGTCGTGGGTGGACCTGCCATCAGCTTGCTCTGCCCACTCCCCAGGCCTGAG
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000299866.13
ENST00000573360.5
CDS-3UTR CCA 90 bp GGCTTCATCTGTCCTAAGTGCAAGGTGAGGGCGCGTGGGGCTGCCAGGCGAGCAGGGGCCTGCGCCCTGTaGGGCAGCCTCAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: GFICPKCKVRARGAARRAGACAL*GSLSAA
Trigger: AGCTGCGCTGAGGCTGCCCCACAGGGCGCAGGCCCC...TGCTCGCCTGGCAGCCCCACGCGCCCTCACCTTGCACTTAGGACAGATGAAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR TCA 90 bp AAAGGTGGCCAAGGGGTGTCTAGGAAAGGACCCAGAAGGCGCCCTCACTCCAAGGCAGACGGTGGACGCTaGGGGTCGGGGCCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: KGGQGVSRKGPRRRPHSKADGGR*GSGPAP
Trigger: GGGCGCAGGCCCCGACCCTCAGCGTCCACCGTCTGC...CTTGGAGTGAGGGCGCCTTCTGGGTCCTTTCCTAGACACCCCTTGGCCACCTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
CDS-3UTR CCA 90 bp CCCACAGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGGGGCCTGCGCCCTGTaGGGCAGCCTCAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: PTGFFPDLDFPVPQGDTVGACAL*GSLSAA
Trigger: AGCTGCGCTGAGGCTGCCCCACAGGGCGCAGGCCCC...TACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCTGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299866.13
ENST00000573360.5
CDS-3UTR CCA 90 bp TCAGGCCTGGGGAGTGGGCAGAGCAAGCTGATGGCAGGTCCACCCACGACTGGGCCTGGGCAGGCCGTCTaGAACACTGTCTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: SGLGSGQSKLMAGPPTTGPGQAV*NTVWDR
Trigger: CCTGTCCCAGACAGTGTTCCAGACGGCCTGCCCAGG...CCCAGTCGTGGGTGGACCTGCCATCAGCTTGCTCTGCCCACTCCCCAGGCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
3UTR CAA 72 bp CTGAGGCTGGTGACCGGCCATGGGCAGTGCAGTCACTaGCCTGTTTCGCCAGCAGCTCAGGCCTGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: LRLVTGHGQCSH*PVSPAAQAWGV
Trigger: CACTCCCCAGGCCTGAGCTGCTGGCGAAACAGGCAAGTGACTGCACTGCCCATGGCCGGTCACCAGCCTCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp TCAGGCCTGGGGAGTGGGCAGAGCAAGCTGATGGCAGGTCCACCCACGACTGGGGCCACATTCAGCCAGTaGCAGCCATCAGAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SGLGSGQSKLMAGPPTTGATFSQ*QPSEAP
Trigger: TGGGGCCTCTGATGGCTGCCACTGGCTGAATGTGGC...CCCAGTCGTGGGTGGACCTGCCATCAGCTTGCTCTGCCCACTCCCCAGGCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp ACCTCCCAGGTCTGGCCCAGCGAACGTGCACTCAGGGGCCTCCCTAGCGAGTTCAATGCTGCCCGTTCTTaGAGAGGTGGGAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: TSQVWPSERALRGLPSEFNAARS*RGGSPG
Trigger: CCCTGGGCTCCCACCTCTCCAAGAACGGGCAGCATT...GAACTCGCTAGGGAGGCCCCTGAGTGCACGTTCGCTGGGCCAGACCTGGGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR GCA 90 bp GGCTTCATCTGTCCTAAGTGCAAGGTGAGGGCGCGTGGGGCTGCCAGGCGAGCAAGTGGTGATGAGAGCTaGCCTCTGAGGCCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GFICPKCKVRARGAARRASGDES*PLRPLE
Trigger: CTCCAGGGGCCTCAGAGGGCAGCTCTCATCACCACT...TGCTCGCCTGGCAGCCCCACGCGCCCTCACCTTGCACTTAGGACAGATGAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CCA 90 bp CTCAGGCCTGGGGAGTGGGCAGAGCAAGCTGATGGCAGGTCCACCCACGACTGGGTGTGGAAGGACAGGTaGGTGGTGGGGTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: LRPGEWAEQADGRSTHDWVWKDR*VVGSVM
Trigger: CATCACAGACCCCACCACCCACCTGTCCTTCCACAC...CCAGTCGTGGGTGGACCTGCCATCAGCTTGCTCTGCCCACTCCCCAGGCCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp CCCCACAGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTGCTGGCAGGGCAGACTaGAGGCGAGAACACCCCCAT +
Preference number: 4 (lower is better)
Translates to: PHRLLPRLGLPCPTGRHSAGRAD*RREHPH
Trigger: ATGGGGGTGTTCTCGCCTCCAGTCTGCCCTGCCAGC...ACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCTGTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GGCCATGGGCAGTGCAGTCACTTGCCTGTTTCGCCAGCAGCTCAGGCCTGGGGAGAGCGAGGCACTCACTaGGCAGCACATCCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: GHGQCSHLPVSPAAQAWGERGTH*AAHPAR
Trigger: TCTGGCTGGATGTGCTGCCCAGTGAGTGCCTCGCTC...TCCCCAGGCCTGAGCTGCTGGCGAAACAGGCAAGTGACTGCACTGCCCATGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
CDS-3UTR TCA 90 bp TCAGGCCTGGGGAGTGGGCAGAGCAAGCTGATGGCAGGTCCACCCACGACTGGGGGAGGAGCAGCACCATaGCAAAACAGCCCACAAAGC +
Preference number: 4 (lower is better)
Translates to: SGLGSGQSKLMAGPPTTGGGAAP*QNSPQS
Trigger: GCTTTGTGGGCTGTTTTGTCATGGTGCTGCTCCTCC...CCCAGTCGTGGGTGGACCTGCCATCAGCTTGCTCTGCCCACTCCCCAGGCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299866.13
ENST00000573360.5
CDS-3UTR GCA 90 bp GGCCATGGGCAGTGCAGTCACTTGCCTGTTTCGCCAGCAGCTCAGGCCTGGGGAGGCAGTGCAGTCACTTaGCTGTTTCGCCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GHGQCSHLPVSPAAQAWGGSAVT*LFRQQL
Trigger: GAGCTGCTGGCGAAACAGGCAAGTGACTGCACTGCC...TCCCCAGGCCTGAGCTGCTGGCGAAACAGGCAAGTGACTGCACTGCCCATGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp GGCTTCATCTGTCCTAAGTGCAAGGTGAGGGCGCGTGGGGCTGCCAGGCGAGCAGCAGATCCACTGCATTaGAGCCATCCCCTCGGTTGC +
Preference number: 4 (lower is better)
Translates to: GFICPKCKVRARGAARRAADPLH*SHPLGC
Trigger: GCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGC...TGCTCGCCTGGCAGCCCCACGCGCCCTCACCTTGCACTTAGGACAGATGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CCA 90 bp CTCAGGCCTGGGGAGTGGGCAGAGCAAGCTGATGGCAGGTCCACCCACGACTGGAGGGGACTGGAACAATaGCCACATGGCGGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: LRPGEWAEQADGRSTHDWRGLEQ*PHGGER
Trigger: TCTTTCCCCGCCATGTGGCCATTGTTCCAGTCCCCT...CCAGTCGTGGGTGGACCTGCCATCAGCTTGCTCTGCCCACTCCCCAGGCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp CTCAGGCCTGGGGAGTGGGCAGAGCAAGCTGATGGCAGGTCCACCCACGACTGGGGTCCTAGAGAAACCTaGGTGTGCATAGGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: LRPGEWAEQADGRSTHDWGPRET*VCIGGD
Trigger: GTCCCCTCCTATGCACACCCAGGTTTCTCTAGGACC...CCAGTCGTGGGTGGACCTGCCATCAGCTTGCTCTGCCCACTCCCCAGGCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp CGTGCAGGCCACATTCAGCCAGTGGCAGCCATCAGAGGCCCCAGAGTTAGGGCAGGTAGGAACCCCTCCTaGGGTTCACCTGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: RAGHIQPVAAIRGPRVRAGRNPS*GSPEAG
Trigger: ACCAGCCTCAGGTGAACCCCAGGAGGGGTTCCTACC...TGCCCTAACTCTGGGGCCTCTGATGGCTGCCACTGGCTGAATGTGGCCTGCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
3UTR CAA 72 bp GGTGAGGGCGCGTGGGGCTGCCAGGCGAGCAAGATCTaGCTCTCATGGATGAGGAAACGATCGGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GEGAWGCQASKI*LSWMRKRSEGC
Trigger: GCAGCCTTCCGATCGTTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTGGCAGCCCCACGCGCCCTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR TCA 90 bp GTGCTAGGTAGGAACCCCTCCTGGGGTTCACCTGAGGCTGGTGACCGGCCATGGTGGAAGGAAGGTCCCTaGGACCCCACTGGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: VLGRNPSWGSPEAGDRPWWKEGP*DPTGLF
Trigger: GAAAAGACCAGTGGGGTCTCAGGGACCTTCCTTCCA...CCATGGCCGGTCACCAGCCTCAGGTGAACCCCAGGAGGGGTTCCTACCTAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp GTTGAGCCAGACCAAACCCACGTGCAGGCCACATTCAGCCAGTGGCAGCCATCAGTGGGCAGAGCAAGCTaGTGGCAGGTCCACCCACGA +
Preference number: 4 (lower is better)
Translates to: VEPDQTHVQATFSQWQPSVGRAS*WQVHPR
Trigger: TCGTGGGTGGACCTGCCATCAGCTTGCTCTGCCCAC...TGATGGCTGCCACTGGCTGAATGTGGCCTGCACGTGGGTTTGGTCTGGCTCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp ACCTCCCAGGTCTGGCCCAGCGAACGTGCACTCAGGGGCCTCCCTAGCGAGTTCGGGTGGTGGAGAACATaGGTGGCTTCATCTGTCCTA +
Preference number: 4 (lower is better)
Translates to: TSQVWPSERALRGLPSEFGWWRT*VASSVL
Trigger: TAGGACAGATGAAGCCACTCATGTTCTCCACCACCC...GAACTCGCTAGGGAGGCCCCTGAGTGCACGTTCGCTGGGCCAGACCTGGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR TCA 90 bp GCGTGGGGCTGCCAGGCGAGCAAGATCTTGCTCTCATGGATGAGGAAACGATCGCTGGTCCCGGTGTGCTaGGGATCACAGGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: AWGCQASKILLSWMRKRSLVPVC*GSQEGL
Trigger: CAGCCCTTCCTGTGATCCTCAGCACACCGGGACCAG...CGATCGTTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTGGCAGCCCCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR GCA 90 bp TCAGGCCTGGGGAGTGGGCAGAGCAAGCTGATGGCAGGTCCACCCACGACTGGGAGAGAAACCTGGGTGTaGATAGGAGGGGACTGGAAC +
Preference number: 4 (lower is better)
Translates to: SGLGSGQSKLMAGPPTTGRETWV*IGGDWN
Trigger: GTTCCAGTCCCCTCCTATGCACACCCAGGTTTCTCT...CCCAGTCGTGGGTGGACCTGCCATCAGCTTGCTCTGCCCACTCCCCAGGCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp CGTGCAGGCCACATTCAGCCAGTGGCAGCCATCAGAGGCCCCAGAGTTAGGGCAACCGGCCATGGGCAGTaGAGTCACTTGCCTGTTTCG +
Preference number: 4 (lower is better)
Translates to: RAGHIQPVAAIRGPRVRATGHGQ*SHLPVS
Trigger: CGAAACAGGCAAGTGACTGCACTGCCCATGGCCGGT...TGCCCTAACTCTGGGGCCTCTGATGGCTGCCACTGGCTGAATGTGGCCTGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp AACATGAGTGGCTTCATCTGTCCTAAGTGCAAGGTGAGGGCGCGTGGGGCTGCCGCCAGCCTGCACCTCTaGCACAGTTCAGCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: NMSGFICPKCKVRARGAAASLHL*HSSALP
Trigger: CGGCAGAGCTGAACTGTGGCAGAGGTGCAGGCTGGC...GGCAGCCCCACGCGCCCTCACCTTGCACTTAGGACAGATGAAGCCACTCATGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp GCCACCACTAGCTGTGGGACTTGGGCTAGTCATTTCCGCTCTCAGCCTCGATGGATGCCAGCGCTCTGGTaGTATGGGTCCTGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: ATTSCGTWASHFRSQPRWMPALW*YGSWSR
Trigger: CCGGGACCAGGACCCATAGCACCAGAGCGCTGGCAT...CCATCGAGGCTGAGAGCGGAAATGACTAGCCCAAGTCCCACAGCTAGTGGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR CCA 90 bp GGTGACCGGCCATGGGCAGTGCAGTCACTTGCCTGTTTCGCCAGCAGCTCAGGCCTTCTGAAAGTCACCTaGGCAGGCCGTCTGGAACAC +
Preference number: 4 (lower is better)
Translates to: GDRPWAVQSLACFASSSGLLKVT*AGRLEH
Trigger: GTGTTCCAGACGGCCTGCCCAGGTGACTTTCAGAAG...GCCTGAGCTGCTGGCGAAACAGGCAAGTGACTGCACTGCCCATGGCCGGTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GGCCATGGGCAGTGCAGTCACTTGCCTGTTTCGCCAGCAGCTCAGGCCTGGGGATCCTCCATCTATAGATaGTCCGAGGAAGGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: GHGQCSHLPVSPAAQAWGSSIYR*SEEGRS
Trigger: GCTGCGGCCTTCCTCGGACCATCTATAGATGGAGGA...TCCCCAGGCCTGAGCTGCTGGCGAAACAGGCAAGTGACTGCACTGCCCATGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GTGCTAGGTAGGAACCCCTCCTGGGGTTCACCTGAGGCTGGTGACCGGCCATGGTCCTCCATCTATAGATaGTCCGAGGAAGGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: VLGRNPSWGSPEAGDRPWSSIYR*SEEGRS
Trigger: GCTGCGGCCTTCCTCGGACCATCTATAGATGGAGGA...CCATGGCCGGTCACCAGCCTCAGGTGAACCCCAGGAGGGGTTCCTACCTAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GGTGACCGGCCATGGGCAGTGCAGTCACTTGCCTGTTTCGCCAGCAGCTCAGGCGGTCCTAGAGAAACCTaGGTGTGCATAGGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: GDRPWAVQSLACFASSSGGPRET*VCIGGD
Trigger: GTCCCCTCCTATGCACACCCAGGTTTCTCTAGGACC...GCCTGAGCTGCTGGCGAAACAGGCAAGTGACTGCACTGCCCATGGCCGGTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp ACAGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGGCTGGCAGGGCAGACTaGAGGCGAGAACACCCCCAT +
Preference number: 4 (lower is better)
Translates to: TGFFPDLDFPVPQGDTVVAGRAD*RREHPH
Trigger: ATGGGGGTGTTCTCGCCTCCAGTCTGCCCTGCCAGC...CACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp TCCTGGGCCCATGTGGAAGCTGCTGAATCAGTTCTCTGTAGGGCCCTGGAACCTAGGTCCACCCACGACTaGGGGCTGGCAGGGCAGACT +
Preference number: 4 (lower is better)
Translates to: SWAHVEAAESVLCRALEPRSTHD*GLAGQT
Trigger: AGTCTGCCCTGCCAGCCCCCAGTCGTGGGTGGACCT...AGGTTCCAGGGCCCTACAGAGAACTGATTCAGCAGCTTCCACATGGGCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp AGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAAAGGTCCACCCACGACTaGGGGCTGGCAGGGCAGACT +
Preference number: 4 (lower is better)
Translates to: RLLPRLGLPCPTGRHSSERSTHD*GLAGQT
Trigger: AGTCTGCCCTGCCAGCCCCCAGTCGTGGGTGGACCT...TTCACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GCAGATGCCTGTGGGGCAGGAAGCAACATAAAGGAGCCAGGGGTGTGGAAGGACGCTGGTGACCGGCCATaGGCAGTGCAGTCACTTGCC +
Preference number: 4 (lower is better)
Translates to: ADACGAGSNIKEPGVWKDAGDRP*AVQSLA
Trigger: GGCAAGTGACTGCACTGCCCATGGCCGGTCACCAGC...GTCCTTCCACACCCCTGGCTCCTTTATGTTGCTTCCTGCCCCACAGGCATCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp CTGAGGCTGGTGACCGGCCATGGGCAGTGCAGTCACTTGCCTGTTTCGCCAGCAACTCACTGGGCCATATaGGCTCCCCATCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: LRLVTGHGQCSHLPVSPATHWAI*APHLPP
Trigger: TGGTGGGAGATGGGGAGCCCATATGGCCCAGTGAGT...TGCTGGCGAAACAGGCAAGTGACTGCACTGCCCATGGCCGGTCACCAGCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp CTGAGGCTGGTGACCGGCCATGGGCAGTGCAGTCACTTGCCTGTTTCGCCAGCATGGAAGGAAGGTCCCTaGGACCCCACTGGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: LRLVTGHGQCSHLPVSPAWKEGP*DPTGLF
Trigger: GAAAAGACCAGTGGGGTCTCAGGGACCTTCCTTCCA...TGCTGGCGAAACAGGCAAGTGACTGCACTGCCCATGGCCGGTCACCAGCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp GTGGTGGAGAACATGAGTGGCTTCATCTGTCCTAAGTGCAAGGTGAGGGCGCGTGTCCTAAGTGCAAGGTaGGGGCGCGTGGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: VVENMSGFICPKCKVRARVLSAR*GRVGLP
Trigger: TGGCAGCCCCACGCGCCCTCACCTTGCACTTAGGAC...ACGCGCCCTCACCTTGCACTTAGGACAGATGAAGCCACTCATGTTCTCCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR TCA 90 bp TCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGCACAGACATTCCCTTTCGTCCTAAGTGCAAGGTaGGGGCGCGTGGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SQIHCIAAIPSVAQTFPFVLSAR*GRVGLP
Trigger: TGGCAGCCCCACGCGCCCTCACCTTGCACTTAGGAC...GAAAGGGAATGTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR TCA 90 bp GCGTGGGGCTGCCAGGCGAGCAAGATCTTGCTCTCATGGATGAGGAAACGATCGACTTCTGCCGCAAGGTaGAGCTGCCCATCATCGGGG +
Preference number: 4 (lower is better)
Translates to: AWGCQASKILLSWMRKRSTSAAR*SCPSSG
Trigger: CCCCGATGATGGGCAGCTTCACCTTGCGGCAGAAGT...CGATCGTTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTGGCAGCCCCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp CCGGAAAGAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCGGGGTGGTGAGGGCGCGTGGGGCTaGCAGGCGAGCAAGATCTTG +
Preference number: 4 (lower is better)
Translates to: PERNQLLPQGEAAHHRGGEGAWG*QASKIL
Trigger: CAAGATCTTGCTCGCCTGGCAGCCCCACGCGCCCTC...ACCACCCCGATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp CAGTCACTGCCTTCCCGCCTAGCAGAGATGACGGCCAGTTCCCTAAAGGTAAAGGAGGGCGCGTGGGGCTaGCAGGCGAGCAAGATCTTG +
Preference number: 4 (lower is better)
Translates to: QSLPSRLAEMTASSLKVKEGAWG*QASKIL
Trigger: CAAGATCTTGCTCGCCTGGCAGCCCCACGCGCCCTC...CTTTACCTTTAGGGAACTGGCCGTCATCTCTGCTAGGCGGGAAGGCAGTGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR CCA 90 bp TCAGGCCTGGGGAGTGGGCAGAGCAAGCTGATGGCAGGTCCACCCACGACTGGGGTGCTTCAGCTTCTGTaGCAGCAATGCTATTCGGAG +
Preference number: 4 (lower is better)
Translates to: SGLGSGQSKLMAGPPTTGVLQLL*QQCYSE
Trigger: CTCCGAATAGCATTGCTGCCACAGAAGCTGAAGCAC...CCCAGTCGTGGGTGGACCTGCCATCAGCTTGCTCTGCCCACTCCCCAGGCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GTGCTAGGTAGGAACCCCTCCTGGGGTTCACCTGAGGCTGGTGACCGGCCATGGGTCTGGAACACTGTCTaGGACAGGAAACTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: VLGRNPSWGSPEAGDRPWVWNTV*DRKLAV
Trigger: CACAGCCAGTTTCCTGTCCCAGACAGTGTTCCAGAC...CCATGGCCGGTCACCAGCCTCAGGTGAACCCCAGGAGGGGTTCCTACCTAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GTTGAGCCAGACCAAACCCACGTGCAGGCCACATTCAGCCAGTGGCAGCCATCAGCCACATTCAGCCAGTaGCAGCCATCAGAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: VEPDQTHVQATFSQWQPSATFSQ*QPSEAP
Trigger: TGGGGCCTCTGATGGCTGCCACTGGCTGAATGTGGC...TGATGGCTGCCACTGGCTGAATGTGGCCTGCACGTGGGTTTGGTCTGGCTCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp CCCACAGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGTGGAAGGACAGGTaGGTGGTGGGGTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: PTGFFPDLDFPVPQGDTVVWKDR*VVGSVM
Trigger: CATCACAGACCCCACCACCCACCTGTCCTTCCACAC...TACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp CGTGCAGGCCACATTCAGCCAGTGGCAGCCATCAGAGGCCCCAGAGTTAGGGCAGGTCCTAGAGAAACCTaGGTGTGCATAGGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: RAGHIQPVAAIRGPRVRAGPRET*VCIGGD
Trigger: GTCCCCTCCTATGCACACCCAGGTTTCTCTAGGACC...TGCCCTAACTCTGGGGCCTCTGATGGCTGCCACTGGCTGAATGTGGCCTGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GTGCTAGGTAGGAACCCCTCCTGGGGTTCACCTGAGGCTGGTGACCGGCCATGGTGGGTTGTGGGATCGTaGGATTCTGCTGTGTCGGAA +
Preference number: 4 (lower is better)
Translates to: VLGRNPSWGSPEAGDRPWWVVGS*DSAVSE
Trigger: TTCCGACACAGCAGAATCCCACGATCCCACAACCCA...CCATGGCCGGTCACCAGCCTCAGGTGAACCCCAGGAGGGGTTCCTACCTAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
CDS-3UTR CCA 90 bp GGGGACATGGTGGCAAAGAGTTACAGATGCCAGCGCTCTGGTGCTATGGGTCCTGATCACAGGAAGGGCTaGCCTCAGAGCCCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: GDMVAKSYRCQRSGAMGPDHRKG*PQSPAP
Trigger: CGGAGCAGGGCTCTGAGGCCAGCCCTTCCTGTGATC...AGGACCCATAGCACCAGAGCGCTGGCATCTGTAACTCTTTGCCACCATGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR TCA 90 bp TACGGCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGCAGACGGTGGACGCTaGGGGTCGGGGCCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: YGIRPMERTFPVMAQVRIADGGR*GSGPAP
Trigger: GGGCGCAGGCCCCGACCCTCAGCGTCCACCGTCTGC...AATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGCCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299866.13
ENST00000573360.5
CDS-3UTR TCA 90 bp AAGACTCAGGGCATCACAGACACAGGTCTTTTTATGGAACTAGCCAGAGGATTCGCAGACGGTGGACGCTaGGGGTCGGGGCCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: KTQGITDTGLFMELARGFADGGR*GSGPAP
Trigger: GGGCGCAGGCCCCGACCCTCAGCGTCCACCGTCTGC...GAATCCTCTGGCTAGTTCCATAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000573360.5
ENST00000649981.1
CDS-3UTR TCA 90 bp AGTGAAGCGGGCTCAAGATCTTCCCATTGTCACCAGCACGGAAAGAGCCCCAAGGTGGGCAGAGCAAGCTaGTGGCAGGTCCACCCACGA +
Preference number: 4 (lower is better)
Translates to: SEAGSRSSHCHQHGKSPKVGRAS*WQVHPR
Trigger: TCGTGGGTGGACCTGCCATCAGCTTGCTCTGCCCAC...CTTGGGGCTCTTTCCGTGCTGGTGACAATGGGAAGATCTTGAGCCCGCTTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp ATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGCACAGACATTCCCTTTGTCCTAAGTGCAAGGTaGGGGCGCGTGGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: IADPLHCSHPLGCTDIPFVLSAR*GRVGLP
Trigger: TGGCAGCCCCACGCGCCCTCACCTTGCACTTAGGAC...AAAGGGAATGTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR TCA 90 bp GCAGATGCCTGTGGGGCAGGAAGCAACATAAAGGAGCCAGGGGTGTGGAAGGACTCCACCACCAGTCACTaGGCTCCAAGCTCACACGCA +
Preference number: 4 (lower is better)
Translates to: ADACGAGSNIKEPGVWKDSTTSH*APSSHA
Trigger: TGCGTGTGAGCTTGGAGCTCAGTGACTGGTGGTGGA...GTCCTTCCACACCCCTGGCTCCTTTATGTTGCTTCCTGCCCCACAGGCATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573360.5
CDS-3UTR GCA 90 bp CTGAGGCTGGTGACCGGCCATGGGCAGTGCAGTCACTTGCCTGTTTCGCCAGCACAGCCAGAAGATTCGTaGTTCAGCTTCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LRLVTGHGQCSHLPVSPAQPEDS*FSFCGS
Trigger: GCTGCCACAGAAGCTGAAGCACGAATCTTCTGGCTG...TGCTGGCGAAACAGGCAAGTGACTGCACTGCCCATGGCCGGTCACCAGCCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp TCAGGCCTGGGGAGTGGGCAGAGCAAGCTGATGGCAGGTCCACCCACGACTGGGAGTACTAAATGCAGATaGCTGTGGGGCAGGAAGCAA +
Preference number: 4 (lower is better)
Translates to: SGLGSGQSKLMAGPPTTGSTKCR*LWGRKQ
Trigger: TTGCTTCCTGCCCCACAGGCATCTGCATTTAGTACT...CCCAGTCGTGGGTGGACCTGCCATCAGCTTGCTCTGCCCACTCCCCAGGCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp GTTGAGCCAGACCAAACCCACGTGCAGGCCACATTCAGCCAGTGGCAGCCATCATTAGCCACGCTGAAATaGTGGCTGGGGACCCTGCTG +
Preference number: 4 (lower is better)
Translates to: VEPDQTHVQATFSQWQPSLATLK*WLGTLL
Trigger: CAGCAGGGTCCCCAGCCAGCATTTCAGCGTGGCTAA...TGATGGCTGCCACTGGCTGAATGTGGCCTGCACGTGGGTTTGGTCTGGCTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp TTCAGCCAGTGGCAGCCATCAGAGGCCCCAGAGTTAGGGCAGAGGTGTCAGTGTACCGGCCATGGGCAGTaGAGTCACTTGCCTGTTTCG +
Preference number: 4 (lower is better)
Translates to: FSQWQPSEAPELGQRCQCTGHGQ*SHLPVS
Trigger: CGAAACAGGCAAGTGACTGCACTGCCCATGGCCGGT...ACACTGACACCTCTGCCCTAACTCTGGGGCCTCTGATGGCTGCCACTGGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp GCGTGGGGCTGCCAGGCGAGCAAGATCTTGCTCTCATGGATGAGGAAACGATCGGCCACAGTTCAGCTCTaGCGAGATGGGATTGGTGGG +
Preference number: 4 (lower is better)
Translates to: AWGCQASKILLSWMRKRSATVQL*RDGIGG
Trigger: CCCACCAATCCCATCTCGGCAGAGCTGAACTGTGGC...CGATCGTTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTGGCAGCCCCACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp GTCCGGAAAGAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCGGGGTGGCCAGCCTGCACCTCTaGCACAGTTCAGCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: VRKEINFCRKVKLPIIGVASLHL*HSSALP
Trigger: CGGCAGAGCTGAACTGTGGCAGAGGTGCAGGCTGGC...CACCCCGATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTTCCGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp GCGTGGGGCTGCCAGGCGAGCAAGATCTTGCTCTCATGGATGAGGAAACGATCGCTAGTGAGAGGGATCTaGCAGGGTGGGGTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: AWGCQASKILLSWMRKRSLVRGI*QGGVRG
Trigger: TCCTCTCACCCCACCCTGGCAGATCCCTCTCACTAG...CGATCGTTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTGGCAGCCCCACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR CCA 90 bp AGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAAAGGGAGGCAACGGCCTaGGGAACTGCGGACAGAGAT +
Preference number: 4 (lower is better)
Translates to: RLLPRLGLPCPTGRHSSEREATA*GTADRD
Trigger: ATCTCTGTCCGCAGTTCCCCAGGCCGTTGCCTCCCT...TTCACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299866.13
CDS-3UTR CCA 90 bp ACCAGCACGGAAAGAGCCCCAAGATCTTGTGGCCATTCTGTTTTCCTCTTGGACGTAGGCAGCAGACGGTaGACGCTGAGGGTCGGGGCC +
Preference number: 4 (lower is better)
Translates to: TSTERAPRSCGHSVFLLDVGSRR*TLRVGA
Trigger: GGCCCCGACCCTCAGCGTCCACCGTCTGCTGCCTAC...GTCCAAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTTTCCGTGCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299866.13
ENST00000573360.5
CDS-3UTR CCA 90 bp GTGGTGGAGAACATGAGTGGCTTCATCTGTCCTAAGTGCAAGGTGAGGGCGCGTCCTGGGCAGGCCGTCTaGAACACTGTCTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: VVENMSGFICPKCKVRARPGQAV*NTVWDR
Trigger: CCTGTCCCAGACAGTGTTCCAGACGGCCTGCCCAGG...ACGCGCCCTCACCTTGCACTTAGGACAGATGAAGCCACTCATGTTCTCCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456096.6
ENST00000575135.5
CDS-3UTR CCA 90 bp GCCACATTCAGCCAGTGGCAGCCATCAGAGGCCCCAGAGTTAGGGCAGAGGTGTCTTCTGAAAGTCACCTaGGCAGGCCGTCTGGAACAC +
Preference number: 4 (lower is better)
Translates to: ATFSQWQPSEAPELGQRCLLKVT*AGRLEH
Trigger: GTGTTCCAGACGGCCTGCCCAGGTGACTTTCAGAAG...ACACCTCTGCCCTAACTCTGGGGCCTCTGATGGCTGCCACTGGCTGAATGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GCCACATTCAGCCAGTGGCAGCCATCAGAGGCCCCAGAGTTAGGGCAGAGGTGTTGCATAGGAGGGGACTaGAACAATGGCCACATGGCG +
Preference number: 4 (lower is better)
Translates to: ATFSQWQPSEAPELGQRCCIGGD*NNGHMA
Trigger: CGCCATGTGGCCATTGTTCCAGTCCCCTCCTATGCA...ACACCTCTGCCCTAACTCTGGGGCCTCTGATGGCTGCCACTGGCTGAATGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp AACATGAGTGGCTTCATCTGTCCTAAGTGCAAGGTGAGGGCGCGTGGGGCTGCCCCGAGATGGGATTGGTaGGCAGGACGTTTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: NMSGFICPKCKVRARGAAPRWDW*AGRLSG
Trigger: CCCTGACAAACGTCCTGCCCACCAATCCCATCTCGG...GGCAGCCCCACGCGCCCTCACCTTGCACTTAGGACAGATGAAGCCACTCATGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CCA 90 bp TGCTGGAATCACTGGTCTTTTCACCTTCGTAGGAGGTGTCACTCCAGGATGTCCCAAGGTGAGGGCGCGTaGGGCTGCCAGGCGAGCAAG +
Preference number: 4 (lower is better)
Translates to: CWNHWSFHLRRRCHSRMSQGEGA*GCQASK
Trigger: CTTGCTCGCCTGGCAGCCCCACGCGCCCTCACCTTG...GGACATCCTGGAGTGACACCTCCTACGAAGGTGAAAAGACCAGTGATTCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR TCA 90 bp CGTGCAGGCCACATTCAGCCAGTGGCAGCCATCAGAGGCCCCAGAGTTAGGGCAACAGGAAACTGGCTGTaGCCTTGCCAATGTCACTGT +
Preference number: 4 (lower is better)
Translates to: RAGHIQPVAAIRGPRVRATGNWL*PCQCHC
Trigger: ACAGTGACATTGGCAAGGTCACAGCCAGTTTCCTGT...TGCCCTAACTCTGGGGCCTCTGATGGCTGCCACTGGCTGAATGTGGCCTGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp ACAGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGTGGAAGGAAGGTCCCTaGGACCCCACTGGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: TGFFPDLDFPVPQGDTVVWKEGP*DPTGLF
Trigger: GAAAAGACCAGTGGGGTCTCAGGGACCTTCCTTCCA...CACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp GTGGCAGCCATCAGAGGCCCCAGAGTTAGGGCAGAGGTGTCAGTGTTTGTTAAAGTGGGCAGAGCAAGCTaGTGGCAGGTCCACCCACGA +
Preference number: 4 (lower is better)
Translates to: VAAIRGPRVRAEVSVFVKVGRAS*WQVHPR
Trigger: TCGTGGGTGGACCTGCCATCAGCTTGCTCTGCCCAC...TTTAACAAACACTGACACCTCTGCCCTAACTCTGGGGCCTCTGATGGCTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp GCCACATTCAGCCAGTGGCAGCCATCAGAGGCCCCAGAGTTAGGGCAGAGGTGTTGGACCCTATTTTCCTaGCTCACTGGGCCATATGGG +
Preference number: 4 (lower is better)
Translates to: ATFSQWQPSEAPELGQRCWTLFS*LTGPYG
Trigger: CCCATATGGCCCAGTGAGTCAGGAAAATAGGGTCCA...ACACCTCTGCCCTAACTCTGGGGCCTCTGATGGCTGCCACTGGCTGAATGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp GCCACCACTAGCTGTGGGACTTGGGCTAGTCATTTCCGCTCTCAGCCTCGATGGGGCAGTTGGGCTGCATaGATGGATGTGATTGGGGAC +
Preference number: 4 (lower is better)
Translates to: ATTSCGTWASHFRSQPRWGSWAA*MDVIGD
Trigger: GTCCCCAATCACATCCATTCATGCAGCCCAACTGCC...CCATCGAGGCTGAGAGCGGAAATGACTAGCCCAAGTCCCACAGCTAGTGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR GCA 90 bp TCCTGGGCCCATGTGGAAGCTGCTGAATCAGTTCTCTGTAGGGCCCTGGAACCTTTAGCCACGCTGAAATaGTGGCTGGGGACCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SWAHVEAAESVLCRALEPLATLK*WLGTLL
Trigger: CAGCAGGGTCCCCAGCCAGCATTTCAGCGTGGCTAA...AGGTTCCAGGGCCCTACAGAGAACTGATTCAGCAGCTTCCACATGGGCCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp CCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAAGTTGAGGAATTAGCCACGCTGAAATaGTGGCTGGGGACCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PRLGLPCPTGRHSSEVEELATLK*WLGTLL
Trigger: CAGCAGGGTCCCCAGCCAGCATTTCAGCGTGGCTAA...TTCCTCAACTTCACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp CCCACAGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAAGAGAAACCTGGGTGTaGATAGGAGGGGACTGGAAC +
Preference number: 4 (lower is better)
Translates to: PTGFFPDLDFPVPQGDTVRETWV*IGGDWN
Trigger: GTTCCAGTCCCCTCCTATGCACACCCAGGTTTCTCT...TACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp CAGCCATCCCCTCGGTTGCACAGACATTCCCTTTCTCGCACTTTGATGCTGGAAGCCAGCCTGCACCTCTaGCACAGTTCAGCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: QPSPRLHRHSLSRTLMLEASLHL*HSSALP
Trigger: CGGCAGAGCTGAACTGTGGCAGAGGTGCAGGCTGGC...TTCCAGCATCAAAGTGCGAGAAAGGGAATGTCTGTGCAACCGAGGGGATGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp AAACCTCTAAGGCTTTATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGGAGGGCGCGTGGGGCTaGCAGGCGAGCAAGATCTTG +
Preference number: 4 (lower is better)
Translates to: KPLRLYDRRSTALQPSPREGAWG*QASKIL
Trigger: CAAGATCTTGCTCGCCTGGCAGCCCCACGCGCCCTC...CCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAAGCCTTAGAGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp TCCGGGATGGGGTGGGTCACAGCAAAAGGACCAGATGCTGGTGTGGTCCGAAGCGGGATCGTGGGATTCTaGTGTGTCGGAAGCTTAGTC +
Preference number: 4 (lower is better)
Translates to: SGMGWVTAKGPDAGVVRSGIVGF*CVGSLV
Trigger: GACTAAGCTTCCGACACAGCAGAATCCCACGATCCC...GCTTCGGACCACACCAGCATCTGGTCCTTTTGCTGTGACCCACCCCATCCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
CDS-3UTR CCA 90 bp CTCAGGCCTGGGGAGTGGGCAGAGCAAGCTGATGGCAGGTCCACCCACGACTGGAGCCCTTTTCGGACTTaGCCTTTTATGCCATATCCT +
Preference number: 4 (lower is better)
Translates to: LRPGEWAEQADGRSTHDWSPFRT*PFMPYP
Trigger: AGGATATGGCATAAAAGGCCAAGTCCGAAAAGGGCT...CCAGTCGTGGGTGGACCTGCCATCAGCTTGCTCTGCCCACTCCCCAGGCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GTTGAGCCAGACCAAACCCACGTGCAGGCCACATTCAGCCAGTGGCAGCCATCAAGGGGACTGGAACAATaGCCACATGGCGGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: VEPDQTHVQATFSQWQPSRGLEQ*PHGGER
Trigger: TCTTTCCCCGCCATGTGGCCATTGTTCCAGTCCCCT...TGATGGCTGCCACTGGCTGAATGTGGCCTGCACGTGGGTTTGGTCTGGCTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp ATTCAGCCAGTGGCAGCCATCAGAGGCCCCAGAGTTAGGGCAGAGGTGTCAGTGAGGGGACTGGAACAATaGCCACATGGCGGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: IQPVAAIRGPRVRAEVSVRGLEQ*PHGGER
Trigger: TCTTTCCCCGCCATGTGGCCATTGTTCCAGTCCCCT...CACTGACACCTCTGCCCTAACTCTGGGGCCTCTGATGGCTGCCACTGGCTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp TGCTCCGCCACCACTAGCTGTGGGACTTGGGCTAGTCATTTCCGCTCTCAGCCTCTGCCGAGATGGGATTaGTGGGCAGGACGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: CSATTSCGTWASHFRSQPLPRWD*WAGRLS
Trigger: TGACAAACGTCCTGCCCACCAATCCCATCTCGGCAG...AGGCTGAGAGCGGAAATGACTAGCCCAAGTCCCACAGCTAGTGGTGGCGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR CCA 90 bp GATCTGCCAGGGTGGGGTGAGAGGATGCCTGGGATCTCTTGGAACAGGGCTGTGAGGCAGCTTTTGCAGTaGCCGGAAGTGGTGATGAGA +
Preference number: 4 (lower is better)
Translates to: DLPGWGERMPGISWNRAVRQLLQ*PEVVMR
Trigger: TCTCATCACCACTTCCGGCCACTGCAAAAGCTGCCT...CACAGCCCTGTTCCAAGAGATCCCAGGCATCCTCTCACCCCACCCTGGCAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR CCA 90 bp TTTATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGCACAGACATTCAAGGTGAGGGCGCGTaGGGCTGCCAGGCGAGCAAG +
Preference number: 4 (lower is better)
Translates to: FMIADPLHCSHPLGCTDIQGEGA*GCQASK
Trigger: CTTGCTCGCCTGGCAGCCCCACGCGCCCTCACCTTG...AATGTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CCA 90 bp GATGCTGGAATCACTGGTCTTTTCACCTTCGTAGGAGGTGTCACTCCAGGATGTCAAGGTGAGGGCGCGTaGGGCTGCCAGGCGAGCAAG +
Preference number: 4 (lower is better)
Translates to: DAGITGLFTFVGGVTPGCQGEGA*GCQASK
Trigger: CTTGCTCGCCTGGCAGCCCCACGCGCCCTCACCTTG...ACATCCTGGAGTGACACCTCCTACGAAGGTGAAAAGACCAGTGATTCCAGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CCA 90 bp TTCAGTCTCCTCTGGGGACATGGTGGCAAAGAGTTACAGATGCCAGCGCTCTGGCAGATGCCAGCGCTCTaGTGCTATGGGTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: FSLLWGHGGKELQMPALWQMPAL*CYGSWS
Trigger: GGACCAGGACCCATAGCACCAGAGCGCTGGCATCTG...CCAGAGCGCTGGCATCTGTAACTCTTTGCCACCATGTCCCCAGAGGAGACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR CCA 90 bp AGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAAAGCTCCGGGATGGGGTaGGTCACAGCAAAAGGACCA +
Preference number: 4 (lower is better)
Translates to: RLLPRLGLPCPTGRHSSESSGMG*VTAKGP
Trigger: TGGTCCTTTTGCTGTGACCCACCCCATCCCGGAGCT...TTCACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
CDS-3UTR TCA 90 bp GCAGATGCCTGTGGGGCAGGAAGCAACATAAAGGAGCCAGGGGTGTGGAAGGACTGGACCCTATTTTCCTaGCTCACTGGGCCATATGGG +
Preference number: 4 (lower is better)
Translates to: ADACGAGSNIKEPGVWKDWTLFS*LTGPYG
Trigger: CCCATATGGCCCAGTGAGTCAGGAAAATAGGGTCCA...GTCCTTCCACACCCCTGGCTCCTTTATGTTGCTTCCTGCCCCACAGGCATCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp GTTGAGCCAGACCAAACCCACGTGCAGGCCACATTCAGCCAGTGGCAGCCATCATGGACCCTATTTTCCTaGCTCACTGGGCCATATGGG +
Preference number: 4 (lower is better)
Translates to: VEPDQTHVQATFSQWQPSWTLFS*LTGPYG
Trigger: CCCATATGGCCCAGTGAGTCAGGAAAATAGGGTCCA...TGATGGCTGCCACTGGCTGAATGTGGCCTGCACGTGGGTTTGGTCTGGCTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp GCCACCACTAGCTGTGGGACTTGGGCTAGTCATTTCCGCTCTCAGCCTCGATGGACAGACAGGAAGGCATaGGGACAGCACTTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: ATTSCGTWASHFRSQPRWTDRKA*GQHFSL
Trigger: GAGACTGAAGTGCTGTCCTCATGCCTTCCTGTCTGT...CCATCGAGGCTGAGAGCGGAAATGACTAGCCCAAGTCCCACAGCTAGTGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR GCA 90 bp GGCGCGTGGGGCTGCCAGGCGAGCAAGATCTTGCTCTCATGGATGAGGAAACGACTTCTGTGGCAGCAATaGTATTCGGAGAGACCTTCC +
Preference number: 4 (lower is better)
Translates to: GAWGCQASKILLSWMRKRLLWQQ*YSERPS
Trigger: GGAAGGTCTCTCCGAATAGCATTGCTGCCACAGAAG...TCGTTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTGGCAGCCCCACGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp ATTCAGCCAGTGGCAGCCATCAGAGGCCCCAGAGTTAGGGCAGAGGTGTCAGTGCAGCCAGAAGATTCGTaGTTCAGCTTCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: IQPVAAIRGPRVRAEVSVQPEDS*FSFCGS
Trigger: GCTGCCACAGAAGCTGAAGCACGAATCTTCTGGCTG...CACTGACACCTCTGCCCTAACTCTGGGGCCTCTGATGGCTGCCACTGGCTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp CCATCTATAGATGGTCCGAGGAAGGCCGCAGCCACTGGTTATGAGCAAGATGGGACCGGCCATGGGCAGTaGAGTCACTTGCCTGTTTCG +
Preference number: 4 (lower is better)
Translates to: PSIDGPRKAAATGYEQDGTGHGQ*SHLPVS
Trigger: CGAAACAGGCAAGTGACTGCACTGCCCATGGCCGGT...CCCATCTTGCTCATAACCAGTGGCTGCGGCCTTCCTCGGACCATCTATAGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp GGCTTTATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGCACAGACCCATTCCTGCCAGCCTaGACCTCTGCCACAGTTCAG +
Preference number: 4 (lower is better)
Translates to: GFMIADPLHCSHPLGCTDPFLPA*TSATVQ
Trigger: CTGAACTGTGGCAGAGGTGCAGGCTGGCAGGAATGG...GTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp ATGAGTGGCTTCATCTGTCCTAAGTGCAAGGTGAGGGCGCGTGGGGCTGCCAGGTGGAGGCAGTTGGGCTaGATGAATGGATGTGATTGG +
Preference number: 4 (lower is better)
Translates to: MSGFICPKCKVRARGAARWRQLG*MNGCDW
Trigger: CCAATCACATCCATTCATGCAGCCCAACTGCCTCCA...CCTGGCAGCCCCACGCGCCCTCACCTTGCACTTAGGACAGATGAAGCCACTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp CCTAAGTGCAAGGTGAGGGCGCGTGGGGCTGCCAGGCGAGCAAGATCTTGCTCTAAAGAAATCAACTTCTaGCGCAAGGTGAAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PKCKVRARGAARRARSCSKEINF*RKVKLP
Trigger: GGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTT...AGAGCAAGATCTTGCTCGCCTGGCAGCCCCACGCGCCCTCACCTTGCACTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CCA 90 bp CAGGGCATCACAGACACAGGTCTTTTTATGGAACTAGCCAGAGGATTCCACCCCCCTGGGCAGGCCGTCTaGAACACTGTCTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: QGITDTGLFMELARGFHPPGQAV*NTVWDR
Trigger: CCTGTCCCAGACAGTGTTCCAGACGGCCTGCCCAGG...GGGGTGGAATCCTCTGGCTAGTTCCATAAAAAGACCTGTGTCTGTGATGCCCTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp TGCTGGAATCACTGGTCTTTTCACCTTCGTAGGAGGTGTCACTCCAGGATGTCCCCTGGGCAGGCCGTCTaGAACACTGTCTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: CWNHWSFHLRRRCHSRMSPGQAV*NTVWDR
Trigger: CCTGTCCCAGACAGTGTTCCAGACGGCCTGCCCAGG...GGACATCCTGGAGTGACACCTCCTACGAAGGTGAAAAGACCAGTGATTCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456096.6
ENST00000575135.5
CDS-3UTR CCA 90 bp GGACAGGGCTGTCAAGGGGTAGACAAGCCATTAGCACTCTATGCCTGTCGTCTTGCCACATTCAGCCAGTaGCAGCCATCAGAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GQGCQGVDKPLALYACRLATFSQ*QPSEAP
Trigger: TGGGGCCTCTGATGGCTGCCACTGGCTGAATGTGGC...AAGACGACAGGCATAGAGTGCTAATGGCTTGTCTACCCCTTGACAGCCCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp TTCAGCCAGTGGCAGCCATCAGAGGCCCCAGAGTTAGGGCAGAGGTGTCAGTGTACTCCTGGGCCCATGTaGAAGCTGCTGAATCAGTTC +
Preference number: 4 (lower is better)
Translates to: FSQWQPSEAPELGQRCQCTPGPM*KLLNQF
Trigger: GAACTGATTCAGCAGCTTCCACATGGGCCCAGGAGT...ACACTGACACCTCTGCCCTAACTCTGGGGCCTCTGATGGCTGCCACTGGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp CCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAAGTTGAGGAAGGTCCTAGAGAAACCTaGGTGTGCATAGGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: PRLGLPCPTGRHSSEVEEGPRET*VCIGGD
Trigger: GTCCCCTCCTATGCACACCCAGGTTTCTCTAGGACC...TTCCTCAACTTCACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp AAAGGTGGCCAAGGGGTGTCTAGGAAAGGACCCAGAAGGCGCCCTCACTCCAAGTGTGTCCTGTCCACCTaGCTCTGGGATAACATGGTC +
Preference number: 4 (lower is better)
Translates to: KGGQGVSRKGPRRRPHSKCVLST*LWDNMV
Trigger: GACCATGTTATCCCAGAGCCAGGTGGACAGGACACA...CTTGGAGTGAGGGCGCCTTCTGGGTCCTTTCCTAGACACCCCTTGGCCACCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573360.5
CDS-3UTR CCA 90 bp CAGGGCATCACAGACACAGGTCTTTTTATGGAACTAGCCAGAGGATTCCACCCCGCTGGCAGGGCAGACTaGAGGCGAGAACACCCCCAT +
Preference number: 4 (lower is better)
Translates to: QGITDTGLFMELARGFHPAGRAD*RREHPH
Trigger: ATGGGGGTGTTCTCGCCTCCAGTCTGCCCTGCCAGC...GGGGTGGAATCCTCTGGCTAGTTCCATAAAAAGACCTGTGTCTGTGATGCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GCACGGAAAGAGCCCCAAGATCTTGTGGCCATTCTGTTTTCCTCTTGGACTGAAAGGTCCACCCACGACTaGGGGCTGGCAGGGCAGACT +
Preference number: 4 (lower is better)
Translates to: ARKEPQDLVAILFSSWTERSTHD*GLAGQT
Trigger: AGTCTGCCCTGCCAGCCCCCAGTCGTGGGTGGACCT...TTCAGTCCAAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTTTCCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp CCATCTATAGATGGTCCGAGGAAGGCCGCAGCCACTGGTTATGAGCAAGATGGGACTCACTGGGCCATATaGGCTCCCCATCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: PSIDGPRKAAATGYEQDGTHWAI*APHLPP
Trigger: TGGTGGGAGATGGGGAGCCCATATGGCCCAGTGAGT...CCCATCTTGCTCATAACCAGTGGCTGCGGCCTTCCTCGGACCATCTATAGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GCCACATTCAGCCAGTGGCAGCCATCAGAGGCCCCAGAGTTAGGGCAGAGGTGTATTTTCCTGACTCACTaGGCCATATGGGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: ATFSQWQPSEAPELGQRCIFLTH*AIWAPH
Trigger: ATGGGGAGCCCATATGGCCCAGTGAGTCAGGAAAAT...ACACCTCTGCCCTAACTCTGGGGCCTCTGATGGCTGCCACTGGCTGAATGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCGGGGTGGTGGAGAACTCAGCTCTGCCGAGATaGGATTGGTGGGCAGGACGT +
Preference number: 4 (lower is better)
Translates to: EINFCRKVKLPIIGVVENSALPR*DWWAGR
Trigger: ACGTCCTGCCCACCAATCCCATCTCGGCAGAGCTGA...GTTCTCCACCACCCCGATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CCA 90 bp CAAGGTGAAGCTGCCCATCATCGGGGTGGTGGAGAACATGAGTGGCTTCATCTGTCAGCTCTGCCGAGATaGGATTGGTGGGCAGGACGT +
Preference number: 4 (lower is better)
Translates to: QGEAAHHRGGGEHEWLHLSALPR*DWWAGR
Trigger: ACGTCCTGCCCACCAATCCCATCTCGGCAGAGCTGA...CAGATGAAGCCACTCATGTTCTCCACCACCCCGATGATGGGCAGCTTCACCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CCA 90 bp CCACTGCATTGCAGCCATCCCCTCGGTTGCACAGACATTCCCTTTCTCGCACTTTGGTGCTATGGGTCCTaGTCCCGGTGTGCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: PLHCSHPLGCTDIPFLALWCYGS*SRCAED
Trigger: ATCCTCAGCACACCGGGACCAGGACCCATAGCACCA...AAGTGCGAGAAAGGGAATGTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR TCA 90 bp ACCAGCACGGAAAGAGCCCCAAGATCTTGTGGCCATTCTGTTTTCCTCTTGGACCGCAGCTCACGTAGGTaGCGATGGCACTCACTCGGA +
Preference number: 4 (lower is better)
Translates to: TSTERAPRSCGHSVFLLDRSSRR*RWHSLG
Trigger: TCCGAGTGAGTGCCATCGTCACCTACGTGAGCTGCG...GTCCAAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTTTCCGTGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299866.13
ENST00000573360.5
CDS-3UTR TCA 90 bp AGTGAAGCGGGCTCAAGATCTTCCCATTGTCACCAGCACGGAAAGAGCCCCAAGGGAGGAGCAGCACCATaGCAAAACAGCCCACAAAGC +
Preference number: 4 (lower is better)
Translates to: SEAGSRSSHCHQHGKSPKGGAAP*QNSPQS
Trigger: GCTTTGTGGGCTGTTTTGTCATGGTGCTGCTCCTCC...CTTGGGGCTCTTTCCGTGCTGGTGACAATGGGAAGATCTTGAGCCCGCTTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299866.13
ENST00000573360.5
CDS-3UTR TCA 90 bp CAGTTGGGCTGCATGAATGGATGTGATTGGGGACAGGAGCTTGCAGCAGCCCAGTCATGGGGCAGATTATaGGGCCCAGCCAGAAGATTC +
Preference number: 4 (lower is better)
Translates to: QLGCMNGCDWGQELAAAQSWGRL*GPARRF
Trigger: GAATCTTCTGGCTGGGCCTCATAATCTGCCCCATGA...CTGGGCTGCTGCAAGCTCCTGTCCCCAATCACATCCATTCATGCAGCCCAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR TCA 90 bp ACAGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGGCAAGATGGGTAGTGTaGGGTATTCCGGTCACTTTC +
Preference number: 4 (lower is better)
Translates to: TGFFPDLDFPVPQGDTVVARWVV*GIPVTF
Trigger: GAAAGTGACCGGAATACCTCACACTACCCATCTTGC...CACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp GCACGGAAAGAGCCCCAAGATCTTGTGGCCATTCTGTTTTCCTCTTGGACTGAAGTGGGCAGAGCAAGCTaGTGGCAGGTCCACCCACGA +
Preference number: 4 (lower is better)
Translates to: ARKEPQDLVAILFSSWTEVGRAS*WQVHPR
Trigger: TCGTGGGTGGACCTGCCATCAGCTTGCTCTGCCCAC...TTCAGTCCAAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTTTCCGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp ATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGCACAGACATTCCCGGCAGTTGGGCTGCATaGATGGATGTGATTGGGGAC +
Preference number: 4 (lower is better)
Translates to: MIADPLHCSHPLGCTDIPGSWAA*MDVIGD
Trigger: GTCCCCAATCACATCCATTCATGCAGCCCAACTGCC...GGGAATGTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR TCA 90 bp CCTCTAAGGCTTTATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGTCCACCACCAGTCACTaGGCTCCAAGCTCACACGCA +
Preference number: 4 (lower is better)
Translates to: PLRLYDRRSTALQPSPRLSTTSH*APSSHA
Trigger: TGCGTGTGAGCTTGGAGCTCAGTGACTGGTGGTGGA...CAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAAGCCTTAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR TCA 90 bp GCCACCACTAGCTGTGGGACTTGGGCTAGTCATTTCCGCTCTCAGCCTCGATGGAAAGTAGCCCCAGCATaGCTATTCTGGGATCCCCAA +
Preference number: 4 (lower is better)
Translates to: ATTSCGTWASHFRSQPRWKVAPA*LFWDPQ
Trigger: TTGGGGATCCCAGAATAGTCATGCTGGGGCTACTTT...CCATCGAGGCTGAGAGCGGAAATGACTAGCCCAAGTCCCACAGCTAGTGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR GCA 90 bp TTTGTTGAGCCAGACCAAACCCACGTGCAGGCCACATTCAGCCAGTGGCAGCCACAGCCAGAAGATTCGTaGTTCAGCTTCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: FVEPDQTHVQATFSQWQPQPEDS*FSFCGS
Trigger: GCTGCCACAGAAGCTGAAGCACGAATCTTCTGGCTG...TGGCTGCCACTGGCTGAATGTGGCCTGCACGTGGGTTTGGTCTGGCTCAACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp CGTGCAGGCCACATTCAGCCAGTGGCAGCCATCAGAGGCCCCAGAGTTAGGGCAGCCATTAGCACTCTATaGCTGTCGTCTTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: RAGHIQPVAAIRGPRVRAAISTL*LSSCFP
Trigger: TGGAAAACAAGACGACAGGCATAGAGTGCTAATGGC...TGCCCTAACTCTGGGGCCTCTGATGGCTGCCACTGGCTGAATGTGGCCTGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp CCCCACAGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTGCTAATCTCTTAAAATaGAGACTCCTGGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: PHRLLPRLGLPCPTGRHSANLLK*RLLGPC
Trigger: ACATGGGCCCAGGAGTCTGCATTTTAAGAGATTAGC...ACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCTGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp ATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGCACAGACATTCCCTTTGCCACAGTTCAGCTCTaGCGAGATGGGATTGGTGGG +
Preference number: 4 (lower is better)
Translates to: IADPLHCSHPLGCTDIPFATVQL*RDGIGG
Trigger: CCCACCAATCCCATCTCGGCAGAGCTGAACTGTGGC...AAAGGGAATGTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp AAACCTCTAAGGCTTTATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGAGTGGTGATGAGAGCTaGCCTCTGAGGCCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: KPLRLYDRRSTALQPSPRSGDES*PLRPLE
Trigger: CTCCAGGGGCCTCAGAGGGCAGCTCTCATCACCACT...CCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAAGCCTTAGAGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp TGCTGGAATCACTGGTCTTTTCACCTTCGTAGGAGGTGTCACTCCAGGATGTCCAGTGGTGATGAGAGCTaGCCTCTGAGGCCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: CWNHWSFHLRRRCHSRMSSGDES*PLRPLE
Trigger: CTCCAGGGGCCTCAGAGGGCAGCTCTCATCACCACT...GGACATCCTGGAGTGACACCTCCTACGAAGGTGAAAAGACCAGTGATTCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp TGCAAGGTGAGGGCGCGTGGGGCTGCCAGGCGAGCAAGATCTTGCTCTCATGGAAAACGATCGGAAGGCTaGTCTGCAAACTATTTCTGC +
Preference number: 4 (lower is better)
Translates to: CKVRARGAARRARSCSHGKRSEG*SANYFC
Trigger: GCAGAAATAGTTTGCAGAGCAGCCTTCCGATCGTTT...TCCATGAGAGCAAGATCTTGCTCGCCTGGCAGCCCCACGCGCCCTCACCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp GTGGTGGAGAACATGAGTGGCTTCATCTGTCCTAAGTGCAAGGTGAGGGCGCGTTTCATCTGTCCTAAGTaGAAGGTGAGGGCGCGTGGG +
Preference number: 4 (lower is better)
Translates to: VVENMSGFICPKCKVRARFICPK*KVRARG
Trigger: CCCACGCGCCCTCACCTTGCACTTAGGACAGATGAA...ACGCGCCCTCACCTTGCACTTAGGACAGATGAAGCCACTCATGTTCTCCACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp GGCGCGTGGGGCTGCCAGGCGAGCAAGATCTTGCTCTCATGGATGAGGAAACGAAAAGAAATCAACTTCTaGCGCAAGGTGAAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GAWGCQASKILLSWMRKRKEINF*RKVKLP
Trigger: GGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTT...TCGTTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTGGCAGCCCCACGCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp CAGCCATCCCCTCGGTTGCACAGACATTCCCTTTCTCGCACTTTGATGCTGGAAGCAGATCCACTGCATTaGAGCCATCCCCTCGGTTGC +
Preference number: 4 (lower is better)
Translates to: QPSPRLHRHSLSRTLMLEADPLH*SHPLGC
Trigger: GCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGC...TTCCAGCATCAAAGTGCGAGAAAGGGAATGTCTGTGCAACCGAGGGGATGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CCA 90 bp GCGTGGGGCTGCCAGGCGAGCAAGATCTTGCTCTCATGGATGAGGAAACGATCGGTGCTTCAGCTTCTGTaGCAGCAATGCTATTCGGAG +
Preference number: 4 (lower is better)
Translates to: AWGCQASKILLSWMRKRSVLQLL*QQCYSE
Trigger: CTCCGAATAGCATTGCTGCCACAGAAGCTGAAGCAC...CGATCGTTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTGGCAGCCCCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CCA 90 bp AGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAAGTCTGGAACACTGTCTaGGACAGGAAACTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RLLPRLGLPCPTGRHSSEVWNTV*DRKLAV
Trigger: CACAGCCAGTTTCCTGTCCCAGACAGTGTTCCAGAC...TTCACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GGCTTTATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGCACAGACCTTCTGAAAGTCACCTaGGCAGGCCGTCTGGAACAC +
Preference number: 4 (lower is better)
Translates to: GFMIADPLHCSHPLGCTDLLKVT*AGRLEH
Trigger: GTGTTCCAGACGGCCTGCCCAGGTGACTTTCAGAAG...GTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456096.6
ENST00000575135.5
CDS-3UTR CCA 90 bp CCGGAAAGAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCGGGGTGGTCTTCTGAAAGTCACCTaGGCAGGCCGTCTGGAACAC +
Preference number: 4 (lower is better)
Translates to: PERNQLLPQGEAAHHRGGLLKVT*AGRLEH
Trigger: GTGTTCCAGACGGCCTGCCCAGGTGACTTTCAGAAG...ACCACCCCGATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456096.6
ENST00000575135.5
CDS-3UTR CCA 90 bp AGTGAAGCGGGCTCAAGATCTTCCCATTGTCACCAGCACGGAAAGAGCCCCAAGTCCTCCATCTATAGATaGTCCGAGGAAGGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: SEAGSRSSHCHQHGKSPKSSIYR*SEEGRS
Trigger: GCTGCGGCCTTCCTCGGACCATCTATAGATGGAGGA...CTTGGGGCTCTTTCCGTGCTGGTGACAATGGGAAGATCTTGAGCCCGCTTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GCCACATTCAGCCAGTGGCAGCCATCAGAGGCCCCAGAGTTAGGGCAGAGGTGTCCAGCCTGGCTAACATaGAGAAACACTGTCTCTACT +
Preference number: 4 (lower is better)
Translates to: ATFSQWQPSEAPELGQRCPAWLT*RNTVST
Trigger: AGTAGAGACAGTGTTTCTCCATGTTAGCCAGGCTGG...ACACCTCTGCCCTAACTCTGGGGCCTCTGATGGCTGCCACTGGCTGAATGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp TCCTGGGCCCATGTGGAAGCTGCTGAATCAGTTCTCTGTAGGGCCCTGGAACCTCTGTCCACCTGGCTCTaGGATAACATGGTCCTAGAG +
Preference number: 4 (lower is better)
Translates to: SWAHVEAAESVLCRALEPLSTWL*DNMVLE
Trigger: CTCTAGGACCATGTTATCCCAGAGCCAGGTGGACAG...AGGTTCCAGGGCCCTACAGAGAACTGATTCAGCAGCTTCCACATGGGCCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp CCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAAGTTGAGGAACTGTCCACCTGGCTCTaGGATAACATGGTCCTAGAG +
Preference number: 4 (lower is better)
Translates to: PRLGLPCPTGRHSSEVEELSTWL*DNMVLE
Trigger: CTCTAGGACCATGTTATCCCAGAGCCAGGTGGACAG...TTCCTCAACTTCACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp CCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAAGTTGAGGAATGTGTCCTGTCCACCTaGCTCTGGGATAACATGGTC +
Preference number: 4 (lower is better)
Translates to: PRLGLPCPTGRHSSEVEECVLST*LWDNMV
Trigger: GACCATGTTATCCCAGAGCCAGGTGGACAGGACACA...TTCCTCAACTTCACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCGCTGGTGACCGGCCATaGGCAGTGCAGTCACTTGCC +
Preference number: 4 (lower is better)
Translates to: AYVLWRGHFLLWLKCELAAGDRP*AVQSLA
Trigger: GGCAAGTGACTGCACTGCCCATGGCCGGTCACCAGC...GGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GTGGTGGAGAACATGAGTGGCTTCATCTGTCCTAAGTGCAAGGTGAGGGCGCGTCTGCCGAGATGGGATTaGTGGGCAGGACGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: VVENMSGFICPKCKVRARLPRWD*WAGRLS
Trigger: TGACAAACGTCCTGCCCACCAATCCCATCTCGGCAG...ACGCGCCCTCACCTTGCACTTAGGACAGATGAAGCCACTCATGTTCTCCACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CCA 90 bp ATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGCACAGACATTCCCCTGCCGAGATGGGATTaGTGGGCAGGACGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: MIADPLHCSHPLGCTDIPLPRWD*WAGRLS
Trigger: TGACAAACGTCCTGCCCACCAATCCCATCTCGGCAG...GGGAATGTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CCA 90 bp ATGGCTGGGAAGGCCCCAGGAAACTTAACAATCATGGTGGAAGGCAAAGCAGGCTCAGCTCTGCCGAGATaGGATTGGTGGGCAGGACGT +
Preference number: 4 (lower is better)
Translates to: MAGKAPGNLTIMVEGKAGSALPR*DWWAGR
Trigger: ACGTCCTGCCCACCAATCCCATCTCGGCAGAGCTGA...GCCTGCTTTGCCTTCCACCATGATTGTTAAGTTTCCTGGGGCCTTCCCAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR CCA 90 bp TGCTTCAGCTTCTGTGGCAGCAATGCTATTCGGAGAGACCTTCCTGGCTTCAAAAGCGCTCTGGTGCTATaGGTCCTGGTCCCGGTGTGC +
Preference number: 4 (lower is better)
Translates to: CFSFCGSNAIRRDLPGFKSALVL*VLVPVC
Trigger: GCACACCGGGACCAGGACCCATAGCACCAGAGCGCT...TTTGAAGCCAGGAAGGTCTCTCCGAATAGCATTGCTGCCACAGAAGCTGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR CCA 90 bp CCATCTATAGATGGTCCGAGGAAGGCCGCAGCCACTGGTTATGAGCAAGATGGGCTAGCGAGTTCCACATaGTCTCATGGGCCCAGCGTT +
Preference number: 4 (lower is better)
Translates to: PSIDGPRKAAATGYEQDGLASST*SHGPSV
Trigger: AACGCTGGGCCCATGAGACCATGTGGAACTCGCTAG...CCCATCTTGCTCATAACCAGTGGCTGCGGCCTTCCTCGGACCATCTATAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR CCA 90 bp TGCTTCAGCTTCTGTGGCAGCAATGCTATTCGGAGAGACCTTCCTGGCTTCAAACCAACCTCCCAGGTCTaGCCCAGCGAACGTGCACTC +
Preference number: 4 (lower is better)
Translates to: CFSFCGSNAIRRDLPGFKPTSQV*PSERAL
Trigger: GAGTGCACGTTCGCTGGGCCAGACCTGGGAGGTTGG...TTTGAAGCCAGGAAGGTCTCTCCGAATAGCATTGCTGCCACAGAAGCTGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR CCA 90 bp CAGGATGTCCGGAAAGAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCCCGTTCTTGGAGAGGTaGGAGCCCAGGGGGAAATGC +
Preference number: 4 (lower is better)
Translates to: QDVRKEINFCRKVKLPIIPFLER*EPRGKC
Trigger: GCATTTCCCCCTGGGCTCCCACCTCTCCAAGAACGG...GATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTTCCGGACATCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR TCA 90 bp ATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGCACAGACATTCCCTTTCCACAAAGCTCTTGCTaGACCAGTCGCAGCTCACGT +
Preference number: 4 (lower is better)
Translates to: IADPLHCSHPLGCTDIPFPQSSC*TSRSSR
Trigger: ACGTGAGCTGCGACTGGTTCAGCAAGAGCTTTGTGG...AAAGGGAATGTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575135.5
ENST00000649981.1
CDS-3UTR TCA 90 bp GGATGTCCGGAAAGAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCGGGGAGGAGCAGCACCATaGCAAAACAGCCCACAAAGC +
Preference number: 4 (lower is better)
Translates to: GCPERNQLLPQGEAAHHRGGAAP*QNSPQS
Trigger: GCTTTGTGGGCTGTTTTGTCATGGTGCTGCTCCTCC...CCGATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTTCCGGACATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575135.5
ENST00000649981.1
CDS-3UTR TCA 90 bp CAGCCATCCCCTCGGTTGCACAGACATTCCCTTTCTCGCACTTTGATGCTGGAAGGAGGAGCAGCACCATaGCAAAACAGCCCACAAAGC +
Preference number: 4 (lower is better)
Translates to: QPSPRLHRHSLSRTLMLEGGAAP*QNSPQS
Trigger: GCTTTGTGGGCTGTTTTGTCATGGTGCTGCTCCTCC...TTCCAGCATCAAAGTGCGAGAAAGGGAATGTCTGTGCAACCGAGGGGATGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575135.5
ENST00000649981.1
CDS-3UTR TCA 90 bp GGCTTTATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGCACAGACTCATGGGGCAGATTATaGGGCCCAGCCAGAAGATTC +
Preference number: 4 (lower is better)
Translates to: GFMIADPLHCSHPLGCTDSWGRL*GPARRF
Trigger: GAATCTTCTGGCTGGGCCTCATAATCTGCCCCATGA...GTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR TCA 90 bp TCCTGGGCCCATGTGGAAGCTGCTGAATCAGTTCTCTGTAGGGCCCTGGAACCTACAGGAAACTGGCTGTaGCCTTGCCAATGTCACTGT +
Preference number: 4 (lower is better)
Translates to: SWAHVEAAESVLCRALEPTGNWL*PCQCHC
Trigger: ACAGTGACATTGGCAAGGTCACAGCCAGTTTCCTGT...AGGTTCCAGGGCCCTACAGAGAACTGATTCAGCAGCTTCCACATGGGCCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp GCAGATGCCTGTGGGGCAGGAAGCAACATAAAGGAGCCAGGGGTGTGGAAGGACGAAGCCAGGAGTCCATaGGAAATCTCTCAATGTGTG +
Preference number: 4 (lower is better)
Translates to: ADACGAGSNIKEPGVWKDEARSP*EISQCV
Trigger: CACACATTGAGAGATTTCTCATGGACTCCTGGCTTC...GTCCTTCCACACCCCTGGCTCCTTTATGTTGCTTCCTGCCCCACAGGCATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp CCGGAAAGAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCGGGGTGGTCTGCATGAATGGATGTaGTTGGGGACAGGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: PERNQLLPQGEAAHHRGGLHEWM*LGTGAC
Trigger: GCAAGCTCCTGTCCCCAATCACATCCATTCATGCAG...ACCACCCCGATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR TCA 90 bp GTCCGGAAAGAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCGGGGTGCTGCATGAATGGATGTaGTTGGGGACAGGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: VRKEINFCRKVKLPIIGVLHEWM*LGTGAC
Trigger: GCAAGCTCCTGTCCCCAATCACATCCATTCATGCAG...CACCCCGATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTTCCGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR TCA 90 bp GGATGTCCGGAAAGAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCGGGGCAGTTGGGCTGCATaGATGGATGTGATTGGGGAC +
Preference number: 4 (lower is better)
Translates to: GCPERNQLLPQGEAAHHRGSWAA*MDVIGD
Trigger: GTCCCCAATCACATCCATTCATGCAGCCCAACTGCC...CCGATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTTCCGGACATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR TCA 90 bp CAAGGTGAAGCTGCCCATCATCGGGGTGGTGGAGAACATGAGTGGCTTCATCTGGGGTGGTGGAGAACATaGGTGGCTTCATCTGTCCTA +
Preference number: 4 (lower is better)
Translates to: QGEAAHHRGGGEHEWLHLGWWRT*VASSVL
Trigger: TAGGACAGATGAAGCCACTCATGTTCTCCACCACCC...CAGATGAAGCCACTCATGTTCTCCACCACCCCGATGATGGGCAGCTTCACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR TCA 90 bp TGCTTCAGCTTCTGTGGCAGCAATGCTATTCGGAGAGACCTTCCTGGCTTCAAAACTTCTGCCGCAAGGTaGAGCTGCCCATCATCGGGG +
Preference number: 4 (lower is better)
Translates to: CFSFCGSNAIRRDLPGFKTSAAR*SCPSSG
Trigger: CCCCGATGATGGGCAGCTTCACCTTGCGGCAGAAGT...TTTGAAGCCAGGAAGGTCTCTCCGAATAGCATTGCTGCCACAGAAGCTGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR TCA 90 bp GTGGCAGCCATCAGAGGCCCCAGAGTTAGGGCAGAGGTGTCAGTGTTTGTTAAATCTCCCCGGTGCATATaGCGCAGAAACTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: VAAIRGPRVRAEVSVFVKSPRCI*RRNSGC
Trigger: ACAGCCTGAGTTTCTGCGTCATATGCACCGGGGAGA...TTTAACAAACACTGACACCTCTGCCCTAACTCTGGGGCCTCTGATGGCTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573360.5
CDS-3UTR TCA 90 bp TCCGGGATGGGGTGGGTCACAGCAAAAGGACCAGATGCTGGTGTGGTCCGAAGCAACCTCATCAGTTCCTaGAACGAGAGAATGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SGMGWVTAKGPDAGVVRSNLISS*NERMFR
Trigger: CCTGAACATTCTCTCGTTTCAGGAACTGATGAGGTT...GCTTCGGACCACACCAGCATCTGGTCCTTTTGCTGTGACCCACCCCATCCCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
CDS-3UTR TCA 90 bp GCGTGGGGCTGCCAGGCGAGCAAGATCTTGCTCTCATGGATGAGGAAACGATCGGATTACAGTTCGAGCTaGGATTTGGATGGGGACACA +
Preference number: 4 (lower is better)
Translates to: AWGCQASKILLSWMRKRSDYSSS*DLDGDT
Trigger: TGTGTCCCCATCCAAATCTCAGCTCGAACTGTAATC...CGATCGTTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTGGCAGCCCCACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR GCA 90 bp CCGGAAAGAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCGGGGTGGTCAGCCAGAAGATTCGTaGTTCAGCTTCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PERNQLLPQGEAAHHRGGQPEDS*FSFCGS
Trigger: GCTGCCACAGAAGCTGAAGCACGAATCTTCTGGCTG...ACCACCCCGATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp AGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAAGTAGCCATACAGGTTTaGAGCTTGGAGAGAGATCCC +
Preference number: 4 (lower is better)
Translates to: RLLPRLGLPCPTGRHSSEVAIQV*SLERDP
Trigger: GGGATCTCTCTCCAAGCTGCAAACCTGTATGGCTAC...TTCACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp GCCACATTCAGCCAGTGGCAGCCATCAGAGGCCCCAGAGTTAGGGCAGAGGTGTGCTAATCTCTTAAAATaGAGACTCCTGGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: ATFSQWQPSEAPELGQRCANLLK*RLLGPC
Trigger: ACATGGGCCCAGGAGTCTGCATTTTAAGAGATTAGC...ACACCTCTGCCCTAACTCTGGGGCCTCTGATGGCTGCCACTGGCTGAATGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp CAGGGCATCACAGACACAGGTCTTTTTATGGAACTAGCCAGAGGATTCCACCCCGGCAGTGCAGTCACTTaGCTGTTTCGCCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: QGITDTGLFMELARGFHPGSAVT*LFRQQL
Trigger: GAGCTGCTGGCGAAACAGGCAAGTGACTGCACTGCC...GGGGTGGAATCCTCTGGCTAGTTCCATAAAAAGACCTGTGTCTGTGATGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp GGCGCGTGGGGCTGCCAGGCGAGCAAGATCTTGCTCTCATGGATGAGGAAACGAATCGGAAGGCTGCTCTaGAAACTATTTCTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: GAWGCQASKILLSWMRKRIGRLL*KLFLLS
Trigger: GGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGAT...TCGTTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTGGCAGCCCCACGCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp CCTCTAAGGCTTTATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGTTCATCTGTCCTAAGTaGAAGGTGAGGGCGCGTGGG +
Preference number: 4 (lower is better)
Translates to: PLRLYDRRSTALQPSPRLFICPK*KVRARG
Trigger: CCCACGCGCCCTCACCTTGCACTTAGGACAGATGAA...CAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAAGCCTTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp TCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGCACAGACATTCCCTTTCAGCCATCCCCTCGGTTaGACAGACATTCCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: SQIHCIAAIPSVAQTFPFSHPLG*TDIPFL
Trigger: GAGAAAGGGAATGTCTGTGCAACCGAGGGGATGGCT...GAAAGGGAATGTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp GGCTTTATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGCACAGACAGCCATCCCCTCGGTTaGACAGACATTCCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: GFMIADPLHCSHPLGCTDSHPLG*TDIPFL
Trigger: GAGAAAGGGAATGTCTGTGCAACCGAGGGGATGGCT...GTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp TCGGAAGGCTGCTCTGCAAACTATTTCTGCTTTCCCAGGCAGCTTTTGCAGTGGGCAGATCCACTGCATTaGAGCCATCCCCTCGGTTGC +
Preference number: 4 (lower is better)
Translates to: SEGCSANYFCFPRQLLQWADPLH*SHPLGC
Trigger: GCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGC...CCACTGCAAAAGCTGCCTGGGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp AGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAACATGTCATCGGGGAATaGGTGTTCCTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RLLPRLGLPCPTGRHSSEHVIGE*VFLILA
Trigger: AGCCAAGATCAGGAACACGCATTCCCCGATGACATG...TTCACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573360.5
CDS-3UTR GCA 90 bp AGTGAAGCGGGCTCAAGATCTTCCCATTGTCACCAGCACGGAAAGAGCCCCAAGGGGATCGTGGGATTCTaGTGTGTCGGAAGCTTAGTC +
Preference number: 4 (lower is better)
Translates to: SEAGSRSSHCHQHGKSPKGIVGF*CVGSLV
Trigger: GACTAAGCTTCCGACACAGCAGAATCCCACGATCCC...CTTGGGGCTCTTTCCGTGCTGGTGACAATGGGAAGATCTTGAGCCCGCTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
CDS-3UTR GCA 90 bp ATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGCACAGACATTCCCTTTGGTGGGGTGAGAGGATaGCTGGGATCTCTTGGAACA +
Preference number: 4 (lower is better)
Translates to: IADPLHCSHPLGCTDIPFGGVRG*LGSLGT
Trigger: TGTTCCAAGAGATCCCAGGCATCCTCTCACCCCACC...AAAGGGAATGTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR CCA 90 bp TGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCCTGCCTGGGCAGGCCGTCTaGAACACTGTCTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: WRGHFLLWLKCELALCSLPGQAV*NTVWDR
Trigger: CCTGTCCCAGACAGTGTTCCAGACGGCCTGCCCAGG...CAGGGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp CCTCTAAGGCTTTATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGTCCTCCATCTATAGATaGTCCGAGGAAGGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: PLRLYDRRSTALQPSPRLSSIYR*SEEGRS
Trigger: GCTGCGGCCTTCCTCGGACCATCTATAGATGGAGGA...CAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAAGCCTTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR CCA 90 bp TGCTTCAGCTTCTGTGGCAGCAATGCTATTCGGAGAGACCTTCCTGGCTTCAAAGCCACATTCAGCCAGTaGCAGCCATCAGAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: CFSFCGSNAIRRDLPGFKATFSQ*QPSEAP
Trigger: TGGGGCCTCTGATGGCTGCCACTGGCTGAATGTGGC...TTTGAAGCCAGGAAGGTCTCTCCGAATAGCATTGCTGCCACAGAAGCTGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573360.5
CDS-3UTR CCA 90 bp GCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCGGTAGGAACCCCTCCTaGGGTTCACCTGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: AYVLWRGHFLLWLKCELAGRNPS*GSPEAG
Trigger: ACCAGCCTCAGGTGAACCCCAGGAGGGGTTCCTACC...GGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp TATTTCTGCTTTCCCAGGCAGCTTTTGCAGTGGCCGGAAGTGGTGATGAGAGCTCCGAGATGGGATTGGTaGGCAGGACGTTTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: YFCFPRQLLQWPEVVMRAPRWDW*AGRLSG
Trigger: CCCTGACAAACGTCCTGCCCACCAATCCCATCTCGG...AGCTCTCATCACCACTTCCGGCCACTGCAAAAGCTGCCTGGGAAAGCAGAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CCA 90 bp CTGCCAGGCGAGCAAGATCTTGCTCTCATGGATGAGGAAACGATCGGAAGGCTGCTGGGGGTGTTAGCGTaGCTCAATGGAATGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LPGEQDLALMDEETIGRLLGVLA*LNGMFS
Trigger: GGAGAACATTCCATTGAGCCACGCTAACACCCCCAG...CAGCCTTCCGATCGTTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR CCA 90 bp GGCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCGACCAGCTCCGGGATaGGGTGGGTCACAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: GIRPMERTFPVMAQVRIGRPAPG*GGSQQK
Trigger: CTTTTGCTGTGACCCACCCCATCCCGGAGCTGGTCG...GCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
CDS-3UTR CCA 90 bp GAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCGGGGTGGTGGAGAACGAGCTGAGATTTGGATaGGGACACAGAGCCAAACCC +
Preference number: 4 (lower is better)
Translates to: EINFCRKVKLPIIGVVENELRFG*GHRAKP
Trigger: GGGTTTGGCTCTGTGTCCCCATCCAAATCTCAGCTC...GTTCTCCACCACCCCGATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR CAA 72 bp GATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTaGCACAGACATTCCCTTTCTCGCACTTTGATGCTG +
Preference number: 4 (lower is better)
Translates to: DRRSTALQPSPR*HRHSLSRTLML
Trigger: CAGCATCAAAGTGCGAGAAAGGGAATGTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR TCA 90 bp ACCAGCACGGAAAGAGCCCCAAGATCTTGTGGCCATTCTGTTTTCCTCTTGGACCCACAAAGCTCTTGCTaGACCAGTCGCAGCTCACGT +
Preference number: 4 (lower is better)
Translates to: TSTERAPRSCGHSVFLLDPQSSC*TSRSSR
Trigger: ACGTGAGCTGCGACTGGTTCAGCAAGAGCTTTGTGG...GTCCAAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTTTCCGTGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299866.13
ENST00000573360.5
CDS-3UTR TCA 90 bp GCTGGTGAATCTCCAGCCCCTCGAGGCCAGGCTTCTGAAAGTCACCTGGGCAGGAACCATGTGCATTCATaGTCCTTTCACTCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: AGESPAPRGQASESHLGRNHVHS*SFHSKA
Trigger: AGCTTTTGAGTGAAAGGATCATGAATGCACATGGTT...CCTGCCCAGGTGACTTTCAGAAGCCTGGCCTCGAGGGGCTGGAGATTCACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573360.5
CDS-3UTR TCA 90 bp GGACAGGGCTGTCAAGGGGTAGACAAGCCATTAGCACTCTATGCCTGTCGTCTTTGGACCCTATTTTCCTaGCTCACTGGGCCATATGGG +
Preference number: 4 (lower is better)
Translates to: GQGCQGVDKPLALYACRLWTLFS*LTGPYG
Trigger: CCCATATGGCCCAGTGAGTCAGGAAAATAGGGTCCA...AAGACGACAGGCATAGAGTGCTAATGGCTTGTCTACCCCTTGACAGCCCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp CCTTTCTCGCACTTTGATGCTGGAATCACTGGTCTTTTCACCTTCGTAGGAGGTACTTCTGCCGCAAGGTaGAGCTGCCCATCATCGGGG +
Preference number: 4 (lower is better)
Translates to: PFSHFDAGITGLFTFVGGTSAAR*SCPSSG
Trigger: CCCCGATGATGGGCAGCTTCACCTTGCGGCAGAAGT...ACCTCCTACGAAGGTGAAAAGACCAGTGATTCCAGCATCAAAGTGCGAGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR TCA 90 bp GGCTTTATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGCACAGACCCCTTTCTCGCACTTTaGTGCTGGAATCACTGGTCT +
Preference number: 4 (lower is better)
Translates to: GFMIADPLHCSHPLGCTDPFLAL*CWNHWS
Trigger: AGACCAGTGATTCCAGCATCAAAGTGCGAGAAAGGG...GTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR TCA 90 bp GTCCGGAAAGAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCGGGGTGCCCTTTCTCGCACTTTaGTGCTGGAATCACTGGTCT +
Preference number: 4 (lower is better)
Translates to: VRKEINFCRKVKLPIIGVPFLAL*CWNHWS
Trigger: AGACCAGTGATTCCAGCATCAAAGTGCGAGAAAGGG...CACCCCGATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTTCCGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR TCA 90 bp TTCAGCCAGTGGCAGCCATCAGAGGCCCCAGAGTTAGGGCAGAGGTGTCAGTGTAACCTCATCAGTTCCTaGAACGAGAGAATGTTCAGG +
Preference number: 4 (lower is better)
Translates to: FSQWQPSEAPELGQRCQCNLISS*NERMFR
Trigger: CCTGAACATTCTCTCGTTTCAGGAACTGATGAGGTT...ACACTGACACCTCTGCCCTAACTCTGGGGCCTCTGATGGCTGCCACTGGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
CDS-3UTR TCA 90 bp GGATGTCCGGAAAGAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCGGACACAGTGGCAGCAGTaGGAGAGAGAGTGTGTAGGA +
Preference number: 4 (lower is better)
Translates to: GCPERNQLLPQGEAAHHRTQWQQ*ERECVG
Trigger: TCCTACACACTCTCTCTCTCACTGCTGCCACTGTGT...CCGATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTTCCGGACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR GCA 90 bp ATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGCACAGACATTCCCTTTCAGCCAGAAGATTCGTaGTTCAGCTTCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: IADPLHCSHPLGCTDIPFQPEDS*FSFCGS
Trigger: GCTGCCACAGAAGCTGAAGCACGAATCTTCTGGCTG...AAAGGGAATGTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp CTGCCAGGCGAGCAAGATCTTGCTCTCATGGATGAGGAAACGATCGGAAGGCTGGTAGCCATACAGGTTTaGAGCTTGGAGAGAGATCCC +
Preference number: 4 (lower is better)
Translates to: LPGEQDLALMDEETIGRLVAIQV*SLERDP
Trigger: GGGATCTCTCTCCAAGCTGCAAACCTGTATGGCTAC...CAGCCTTCCGATCGTTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456096.6
ENST00000575135.5
CDS-3UTR GCA 90 bp GCAGATGCCTGTGGGGCAGGAAGCAACATAAAGGAGCCAGGGGTGTGGAAGGACGCCATTAGCACTCTATaGCTGTCGTCTTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: ADACGAGSNIKEPGVWKDAISTL*LSSCFP
Trigger: TGGAAAACAAGACGACAGGCATAGAGTGCTAATGGC...GTCCTTCCACACCCCTGGCTCCTTTATGTTGCTTCCTGCCCCACAGGCATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp AGTGAAGCGGGCTCAAGATCTTCCCATTGTCACCAGCACGGAAAGAGCCCCAAGTCCATGAGTACTAAATaGAGATGCCTGTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SEAGSRSSHCHQHGKSPKSMSTK*RCLWGR
Trigger: CCTGCCCCACAGGCATCTGCATTTAGTACTCATGGA...CTTGGGGCTCTTTCCGTGCTGGTGACAATGGGAAGATCTTGAGCCCGCTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp ACAAATGGGTTGTGGGATCGTGGGATTCTGCTGTGTCGGAAGCTTAGTCGATTGGGCAGTGCAGTCACTTaGCTGTTTCGCCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: TNGLWDRGILLCRKLSRLGSAVT*LFRQQL
Trigger: GAGCTGCTGGCGAAACAGGCAAGTGACTGCACTGCC...CAATCGACTAAGCTTCCGACACAGCAGAATCCCACGATCCCACAACCCATTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
CDS-3UTR GCA 90 bp GATCGGAAGGCTGCTCTGCAAACTATTTCTGCTTTCCCAGGCAGCTTTTGCAGTGCCACAGTTCAGCTCTaGCGAGATGGGATTGGTGGG +
Preference number: 4 (lower is better)
Translates to: DRKAALQTISAFPGSFCSATVQL*RDGIGG
Trigger: CCCACCAATCCCATCTCGGCAGAGCTGAACTGTGGC...ACTGCAAAAGCTGCCTGGGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp GATCGGAAGGCTGCTCTGCAAACTATTTCTGCTTTCCCAGGCAGCTTTTGCAGTCCATTCCTGCCAGCCTaGACCTCTGCCACAGTTCAG +
Preference number: 4 (lower is better)
Translates to: DRKAALQTISAFPGSFCSPFLPA*TSATVQ
Trigger: CTGAACTGTGGCAGAGGTGCAGGCTGGCAGGAATGG...ACTGCAAAAGCTGCCTGGGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp CAGGATGTCCGGAAAGAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCTTCATCTGTCCTAAGTaGAAGGTGAGGGCGCGTGGG +
Preference number: 4 (lower is better)
Translates to: QDVRKEINFCRKVKLPIIFICPK*KVRARG
Trigger: CCCACGCGCCCTCACCTTGCACTTAGGACAGATGAA...GATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTTCCGGACATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp CCATCTATAGATGGTCCGAGGAAGGCCGCAGCCACTGGTTATGAGCAAGATGGGGCAAAGAGTTACAGATaGCAGCGCTCTGGTGCTATG +
Preference number: 4 (lower is better)
Translates to: PSIDGPRKAAATGYEQDGAKSYR*QRSGAM
Trigger: CATAGCACCAGAGCGCTGGCATCTGTAACTCTTTGC...CCCATCTTGCTCATAACCAGTGGCTGCGGCCTTCCTCGGACCATCTATAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR CCA 90 bp ATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGCACAGACATTCCCTTTTCGGAGAGACCTTCCTaGCTTCAAAGATCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: IADPLHCSHPLGCTDIPFSERPS*LQRSSG
Trigger: GCCACTGGATCTTTGAAGCCAGGAAGGTCTCTCCGA...AAAGGGAATGTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CCA 90 bp CAGCCATCCCCTCGGTTGCACAGACATTCCCTTTCTCGCACTTTGATGCTGGAAGTCTGGAACACTGTCTaGGACAGGAAACTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: QPSPRLHRHSLSRTLMLEVWNTV*DRKLAV
Trigger: CACAGCCAGTTTCCTGTCCCAGACAGTGTTCCAGAC...TTCCAGCATCAAAGTGCGAGAAAGGGAATGTCTGTGCAACCGAGGGGATGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456096.6
ENST00000575135.5
CDS-3UTR CCA 90 bp ACAAATGGGTTGTGGGATCGTGGGATTCTGCTGTGTCGGAAGCTTAGTCGATTGGTGTGGAAGGACAGGTaGGTGGTGGGGTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: TNGLWDRGILLCRKLSRLVWKDR*VVGSVM
Trigger: CATCACAGACCCCACCACCCACCTGTCCTTCCACAC...CAATCGACTAAGCTTCCGACACAGCAGAATCCCACGATCCCACAACCCATTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
CDS-3UTR CCA 90 bp GTGGCAGCCATCAGAGGCCCCAGAGTTAGGGCAGAGGTGTCAGTGTTTGTTAAAACTCCTGGGCCCATGTaGAAGCTGCTGAATCAGTTC +
Preference number: 4 (lower is better)
Translates to: VAAIRGPRVRAEVSVFVKTPGPM*KLLNQF
Trigger: GAACTGATTCAGCAGCTTCCACATGGGCCCAGGAGT...TTTAACAAACACTGACACCTCTGCCCTAACTCTGGGGCCTCTGATGGCTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GGACAGGGCTGTCAAGGGGTAGACAAGCCATTAGCACTCTATGCCTGTCGTCTTACTCCTGGGCCCATGTaGAAGCTGCTGAATCAGTTC +
Preference number: 4 (lower is better)
Translates to: GQGCQGVDKPLALYACRLTPGPM*KLLNQF
Trigger: GAACTGATTCAGCAGCTTCCACATGGGCCCAGGAGT...AAGACGACAGGCATAGAGTGCTAATGGCTTGTCTACCCCTTGACAGCCCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GAGGTGTCAGTGTTTGTTAAAGCTGTGGTCTCTGAGTTTGTGGCTGGGTTTTACGCTGGCAGGGCAGACTaGAGGCGAGAACACCCCCAT +
Preference number: 4 (lower is better)
Translates to: EVSVFVKAVVSEFVAGFYAGRAD*RREHPH
Trigger: ATGGGGGTGTTCTCGCCTCCAGTCTGCCCTGCCAGC...GTAAAACCCAGCCACAAACTCAGAGACCACAGCTTTAACAAACACTGACACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp TGTGGGATCGTGGGATTCTGCTGTGTCGGAAGCTTAGTCGATTGTAGAAACTCCGCTTCTTCCCCGACTTaGACTTCCCTGTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: CGIVGFCCVGSLVDCRNSASSPT*TSLSHR
Trigger: CCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGC...GGAGTTTCTACAATCGACTAAGCTTCCGACACAGCAGAATCCCACGATCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
CDS-3UTR CCA 90 bp GATGCTGGAATCACTGGTCTTTTCACCTTCGTAGGAGGTGTCACTCCAGGATGTCCGAGATGGGATTGGTaGGCAGGACGTTTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: DAGITGLFTFVGGVTPGCPRWDW*AGRLSG
Trigger: CCCTGACAAACGTCCTGCCCACCAATCCCATCTCGG...ACATCCTGGAGTGACACCTCCTACGAAGGTGAAAAGACCAGTGATTCCAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CCA 90 bp GTTGAGCCAGACCAAACCCACGTGCAGGCCACATTCAGCCAGTGGCAGCCATCAAAAACAAATGGGTTGTaGGATCGTGGGATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: VEPDQTHVQATFSQWQPSKTNGL*DRGILL
Trigger: CAGCAGAATCCCACGATCCCACAACCCATTTGTTTT...TGATGGCTGCCACTGGCTGAATGTGGCCTGCACGTGGGTTTGGTCTGGCTCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
CDS-3UTR TCA 90 bp CTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCCGCAGCTCACGTAGGTaGCGATGGCACTCACTCGGA +
Preference number: 4 (lower is better)
Translates to: LWRGHFLLWLKCELALCSRSSRR*RWHSLG
Trigger: TCCGAGTGAGTGCCATCGTCACCTACGTGAGCTGCG...GGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299866.13
ENST00000573360.5
CDS-3UTR TCA 90 bp GCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCCCACAAAGCTCTTGCTaGACCAGTCGCAGCTCACGT +
Preference number: 4 (lower is better)
Translates to: AYVLWRGHFLLWLKCELAPQSSC*TSRSSR
Trigger: ACGTGAGCTGCGACTGGTTCAGCAAGAGCTTTGTGG...GGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299866.13
ENST00000573360.5
CDS-3UTR TCA 90 bp GATGCTGGAATCACTGGTCTTTTCACCTTCGTAGGAGGTGTCACTCCAGGATGTCCACAAAGCTCTTGCTaGACCAGTCGCAGCTCACGT +
Preference number: 4 (lower is better)
Translates to: DAGITGLFTFVGGVTPGCPQSSC*TSRSSR
Trigger: ACGTGAGCTGCGACTGGTTCAGCAAGAGCTTTGTGG...ACATCCTGGAGTGACACCTCCTACGAAGGTGAAAAGACCAGTGATTCCAGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575135.5
ENST00000649981.1
CDS-3UTR TCA 90 bp ACAAATGGGTTGTGGGATCGTGGGATTCTGCTGTGTCGGAAGCTTAGTCGATTGGGAGGAGCAGCACCATaGCAAAACAGCCCACAAAGC +
Preference number: 4 (lower is better)
Translates to: TNGLWDRGILLCRKLSRLGGAAP*QNSPQS
Trigger: GCTTTGTGGGCTGTTTTGTCATGGTGCTGCTCCTCC...CAATCGACTAAGCTTCCGACACAGCAGAATCCCACGATCCCACAACCCATTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619408.1
CDS-3UTR TCA 90 bp CAGGGCATCACAGACACAGGTCTTTTTATGGAACTAGCCAGAGGATTCCACCCCTCATGGGGCAGATTATaGGGCCCAGCCAGAAGATTC +
Preference number: 4 (lower is better)
Translates to: QGITDTGLFMELARGFHPSWGRL*GPARRF
Trigger: GAATCTTCTGGCTGGGCCTCATAATCTGCCCCATGA...GGGGTGGAATCCTCTGGCTAGTTCCATAAAAAGACCTGTGTCTGTGATGCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
ENST00000649981.1
CDS-3UTR TCA 90 bp TGCTGGAATCACTGGTCTTTTCACCTTCGTAGGAGGTGTCACTCCAGGATGTCCTCATGGGGCAGATTATaGGGCCCAGCCAGAAGATTC +
Preference number: 4 (lower is better)
Translates to: CWNHWSFHLRRRCHSRMSSWGRL*GPARRF
Trigger: GAATCTTCTGGCTGGGCCTCATAATCTGCCCCATGA...GGACATCCTGGAGTGACACCTCCTACGAAGGTGAAAAGACCAGTGATTCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR TCA 90 bp CCATCTATAGATGGTCCGAGGAAGGCCGCAGCCACTGGTTATGAGCAAGATGGGGAAGCCAGGAGTCCATaGGAAATCTCTCAATGTGTG +
Preference number: 4 (lower is better)
Translates to: PSIDGPRKAAATGYEQDGEARSP*EISQCV
Trigger: CACACATTGAGAGATTTCTCATGGACTCCTGGCTTC...CCCATCTTGCTCATAACCAGTGGCTGCGGCCTTCCTCGGACCATCTATAGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp AAAGGTGGCCAAGGGGTGTCTAGGAAAGGACCCAGAAGGCGCCCTCACTCCAAGTTTCTGTACACCACCTaGTTATTTAGCCACGCTGAA +
Preference number: 4 (lower is better)
Translates to: KGGQGVSRKGPRRRPHSKFLYTT*LFSHAE
Trigger: TTCAGCGTGGCTAAATAATCAGGTGGTGTACAGAAA...CTTGGAGTGAGGGCGCCTTCTGGGTCCTTTCCTAGACACCCCTTGGCCACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573360.5
CDS-3UTR TCA 90 bp AAACCTCTAAGGCTTTATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGGAAGGGAGACCTGGGTaGAAGTCAGGGACAGAAAGT +
Preference number: 4 (lower is better)
Translates to: KPLRLYDRRSTALQPSPREGRPG*KSGTES
Trigger: ACTTTCTGTCCCTGACTTTCACCCAGGTCTCCCTTC...CCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAAGCCTTAGAGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR GCA 90 bp AAGAGAACCTCATCAGTTCCTAATGCTGGTGAATCTCCAGCCCCTCGAGGCCAGCTTCTGTGGCAGCAATaGTATTCGGAGAGACCTTCC +
Preference number: 4 (lower is better)
Translates to: KRTSSVPNAGESPAPRGQLLWQQ*YSERPS
Trigger: GGAAGGTCTCTCCGAATAGCATTGCTGCCACAGAAG...CTGGCCTCGAGGGGCTGGAGATTCACCAGCATTAGGAACTGATGAGGTTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
CDS-3UTR GCA 90 bp GTGGCAGCCATCAGAGGCCCCAGAGTTAGGGCAGAGGTGTCAGTGTTTGTTAAAGTAGCCATACAGGTTTaGAGCTTGGAGAGAGATCCC +
Preference number: 4 (lower is better)
Translates to: VAAIRGPRVRAEVSVFVKVAIQV*SLERDP
Trigger: GGGATCTCTCTCCAAGCTGCAAACCTGTATGGCTAC...TTTAACAAACACTGACACCTCTGCCCTAACTCTGGGGCCTCTGATGGCTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp GCCCACAAAGCTCTTGCTGAACCAGTCGCAGCTCACGTAGGTGACGATGGCACTTGCCAATGTCACTGTTaGCTCCCATCTTACAAAGGA +
Preference number: 4 (lower is better)
Translates to: AHKALAEPVAAHVGDDGTCQCHC*LPSYKG
Trigger: TCCTTTGTAAGATGGGAGGCAACAGTGACATTGGCA...AGTGCCATCGTCACCTACGTGAGCTGCGACTGGTTCAGCAAGAGCTTTGTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573360.5
CDS-3UTR GCA 90 bp AAGAGAACCTCATCAGTTCCTAATGCTGGTGAATCTCCAGCCCCTCGAGGCCAGTCCATGAGTACTAAATaGAGATGCCTGTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KRTSSVPNAGESPAPRGQSMSTK*RCLWGR
Trigger: CCTGCCCCACAGGCATCTGCATTTAGTACTCATGGA...CTGGCCTCGAGGGGCTGGAGATTCACCAGCATTAGGAACTGATGAGGTTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573360.5
CDS-3UTR CCA 90 bp CAGGGCATCACAGACACAGGTCTTTTTATGGAACTAGCCAGAGGATTCCACCCCTCGGAGAGACCTTCCTaGCTTCAAAGATCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: QGITDTGLFMELARGFHPSERPS*LQRSSG
Trigger: GCCACTGGATCTTTGAAGCCAGGAAGGTCTCTCCGA...GGGGTGGAATCCTCTGGCTAGTTCCATAAAAAGACCTGTGTCTGTGATGCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
ENST00000649981.1
CDS-3UTR CCA 90 bp ACCAGCACGGAAAGAGCCCCAAGATCTTGTGGCCATTCTGTTTTCCTCTTGGACTCGGAGAGACCTTCCTaGCTTCAAAGATCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: TSTERAPRSCGHSVFLLDSERPS*LQRSSG
Trigger: GCCACTGGATCTTTGAAGCCAGGAAGGTCTCTCCGA...GTCCAAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTTTCCGTGCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp TATTTCTGCTTTCCCAGGCAGCTTTTGCAGTGGCCGGAAGTGGTGATGAGAGCTTCGGAGAGACCTTCCTaGCTTCAAAGATCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: YFCFPRQLLQWPEVVMRASERPS*LQRSSG
Trigger: GCCACTGGATCTTTGAAGCCAGGAAGGTCTCTCCGA...AGCTCTCATCACCACTTCCGGCCACTGCAAAAGCTGCCTGGGAAAGCAGAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CCA 90 bp ATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGCACAGACATTCCCTTTGTGCTTCAGCTTCTGTaGCAGCAATGCTATTCGGAG +
Preference number: 4 (lower is better)
Translates to: IADPLHCSHPLGCTDIPFVLQLL*QQCYSE
Trigger: CTCCGAATAGCATTGCTGCCACAGAAGCTGAAGCAC...AAAGGGAATGTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CCA 90 bp CCATCTATAGATGGTCCGAGGAAGGCCGCAGCCACTGGTTATGAGCAAGATGGGCCAGCCTGGCTAACATaGAGAAACACTGTCTCTACT +
Preference number: 4 (lower is better)
Translates to: PSIDGPRKAAATGYEQDGPAWLT*RNTVST
Trigger: AGTAGAGACAGTGTTTCTCCATGTTAGCCAGGCTGG...CCCATCTTGCTCATAACCAGTGGCTGCGGCCTTCCTCGGACCATCTATAGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp TATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCCGCCACGCTGAAATGCTaGCTGGGGACCCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: YGEDISCYGSSANWPYVPATLKC*LGTLLE
Trigger: TTCCAGCAGGGTCCCCAGCCAGCATTTCAGCGTGGC...GGGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp CTGAGGCTGGTGACCGGCCATGGGCAGTGCAGTCACTTGCCTGTTTCGCCAGCACCAGCACAGATGACCTaGAAGATAAAATTATACACA +
Preference number: 4 (lower is better)
Translates to: LRLVTGHGQCSHLPVSPAPAQMT*KIKLYT
Trigger: TGTGTATAATTTTATCTTCCAGGTCATCTGTGCTGG...TGCTGGCGAAACAGGCAAGTGACTGCACTGCCCATGGCCGGTCACCAGCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp ACCAGCACGGAAAGAGCCCCAAGATCTTGTGGCCATTCTGTTTTCCTCTTGGACCTGTCCACCTGGCTCTaGGATAACATGGTCCTAGAG +
Preference number: 4 (lower is better)
Translates to: TSTERAPRSCGHSVFLLDLSTWL*DNMVLE
Trigger: CTCTAGGACCATGTTATCCCAGAGCCAGGTGGACAG...GTCCAAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTTTCCGTGCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp AAGACTCAGGGCATCACAGACACAGGTCTTTTTATGGAACTAGCCAGAGGATTCGGTAGGAACCCCTCCTaGGGTTCACCTGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: KTQGITDTGLFMELARGFGRNPS*GSPEAG
Trigger: ACCAGCCTCAGGTGAACCCCAGGAGGGGTTCCTACC...GAATCCTCTGGCTAGTTCCATAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GTGGCAGCCATCAGAGGCCCCAGAGTTAGGGCAGAGGTGTCAGTGTTTGTTAAAATTTTCCTGACTCACTaGGCCATATGGGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: VAAIRGPRVRAEVSVFVKIFLTH*AIWAPH
Trigger: ATGGGGAGCCCATATGGCCCAGTGAGTCAGGAAAAT...TTTAACAAACACTGACACCTCTGCCCTAACTCTGGGGCCTCTGATGGCTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp TATTTCTGCTTTCCCAGGCAGCTTTTGCAGTGGCCGGAAGTGGTGATGAGAGCTAGGCAGCTTTTGCAGTaGCCGGAAGTGGTGATGAGA +
Preference number: 4 (lower is better)
Translates to: YFCFPRQLLQWPEVVMRARQLLQ*PEVVMR
Trigger: TCTCATCACCACTTCCGGCCACTGCAAAAGCTGCCT...AGCTCTCATCACCACTTCCGGCCACTGCAAAAGCTGCCTGGGAAAGCAGAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CCA 90 bp ACGGCCAGTTCCCTAAAGGTAAAGGTTGGGTTTTTCCACCACCAGTCACTGAGCCTGGGGGTGTTAGCGTaGCTCAATGGAATGTTCTCC +
Preference number: 4 (lower is better)
Translates to: TASSLKVKVGFFHHQSLSLGVLA*LNGMFS
Trigger: GGAGAACATTCCATTGAGCCACGCTAACACCCCCAG...GCTCAGTGACTGGTGGTGGAAAAACCCAACCTTTACCTTTAGGGAACTGGCCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
CDS-3UTR CCA 90 bp CCATCTATAGATGGTCCGAGGAAGGCCGCAGCCACTGGTTATGAGCAAGATGGGCAAGAGCTAAGCGGATaGTCACTGAACTCCCTTTAC +
Preference number: 4 (lower is better)
Translates to: PSIDGPRKAAATGYEQDGQELSG*SLNSLY
Trigger: GTAAAGGGAGTTCAGTGACCATCCGCTTAGCTCTTG...CCCATCTTGCTCATAACCAGTGGCTGCGGCCTTCCTCGGACCATCTATAGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
CDS-3UTR CCA 90 bp TATTTCTGCTTTCCCAGGCAGCTTTTGCAGTGGCCGGAAGTGGTGATGAGAGCTATTCACAGTTCTGCATaGCTGGGAAGGCCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: YFCFPRQLLQWPEVVMRAIHSSA*LGRPQE
Trigger: TTCCTGGGGCCTTCCCAGCCATGCAGAACTGTGAAT...AGCTCTCATCACCACTTCCGGCCACTGCAAAAGCTGCCTGGGAAAGCAGAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR CCA 90 bp TTCCGGTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTATGGAAATGTGTGTTGGGGGCTaGGGAGCCCTCTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: FRSLSKTQGITDTGLFMEMCVGG*GALWGR
Trigger: CCTTCCCCAGAGGGCTCCCCAGCCCCCAACACACAT...TTCCATAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGACCGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR TCA 90 bp TGTGGGATCGTGGGATTCTGCTGTGTCGGAAGCTTAGTCGATTGTAGAAACTCCTCATGGGGCAGATTATaGGGCCCAGCCAGAAGATTC +
Preference number: 4 (lower is better)
Translates to: CGIVGFCCVGSLVDCRNSSWGRL*GPARRF
Trigger: GAATCTTCTGGCTGGGCCTCATAATCTGCCCCATGA...GGAGTTTCTACAATCGACTAAGCTTCCGACACAGCAGAATCCCACGATCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572102.5
ENST00000572428.5
ENST00000619408.1
CDS-3UTR TCA 90 bp ACCAGCACGGAAAGAGCCCCAAGATCTTGTGGCCATTCTGTTTTCCTCTTGGACACAGGAAACTGGCTGTaGCCTTGCCAATGTCACTGT +
Preference number: 4 (lower is better)
Translates to: TSTERAPRSCGHSVFLLDTGNWL*PCQCHC
Trigger: ACAGTGACATTGGCAAGGTCACAGCCAGTTTCCTGT...GTCCAAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTTTCCGTGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp CCCTCGGTTGCACAGACATTCCCTTTCTCGCACTTTGATGCTGGAATCACTGGTACAGGAAACTGGCTGTaGCCTTGCCAATGTCACTGT +
Preference number: 4 (lower is better)
Translates to: PSVAQTFPFSHFDAGITGTGNWL*PCQCHC
Trigger: ACAGTGACATTGGCAAGGTCACAGCCAGTTTCCTGT...ACCAGTGATTCCAGCATCAAAGTGCGAGAAAGGGAATGTCTGTGCAACCGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456096.6
ENST00000575135.5
CDS-3UTR TCA 90 bp GTTGAGCCAGACCAAACCCACGTGCAGGCCACATTCAGCCAGTGGCAGCCATCAGTTTTCCTCTTGGACTaGATTGTCTTCCGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: VEPDQTHVQATFSQWQPSVFLLD*IVFRLF
Trigger: AAACAAACGGAAGACAATTCAGTCCAAGAGGAAAAC...TGATGGCTGCCACTGGCTGAATGTGGCCTGCACGTGGGTTTGGTCTGGCTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp AGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAATTTCTGTACACCACCTaGTTATTTAGCCACGCTGAA +
Preference number: 4 (lower is better)
Translates to: RLLPRLGLPCPTGRHSSEFLYTT*LFSHAE
Trigger: TTCAGCGTGGCTAAATAATCAGGTGGTGTACAGAAA...TTCACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp GATGCTGGAATCACTGGTCTTTTCACCTTCGTAGGAGGTGTCACTCCAGGATGTGGGTGGTGGAGAACATaGGTGGCTTCATCTGTCCTA +
Preference number: 4 (lower is better)
Translates to: DAGITGLFTFVGGVTPGCGWWRT*VASSVL
Trigger: TAGGACAGATGAAGCCACTCATGTTCTCCACCACCC...ACATCCTGGAGTGACACCTCCTACGAAGGTGAAAAGACCAGTGATTCCAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR TCA 90 bp ACGGCCAGTTCCCTAAAGGTAAAGGTTGGGTTTTTCCACCACCAGTCACTGAGCCCCTTTCTCGCACTTTaGTGCTGGAATCACTGGTCT +
Preference number: 4 (lower is better)
Translates to: TASSLKVKVGFFHHQSLSPFLAL*CWNHWS
Trigger: AGACCAGTGATTCCAGCATCAAAGTGCGAGAAAGGG...GCTCAGTGACTGGTGGTGGAAAAACCCAACCTTTACCTTTAGGGAACTGGCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR TCA 90 bp CCGGAAAGAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCGGGGTGGTACCTCTAAGGCTTTATaGTCGCAGATCCACTGCATT +
Preference number: 4 (lower is better)
Translates to: PERNQLLPQGEAAHHRGGTSKAL*SQIHCI
Trigger: AATGCAGTGGATCTGCGATCATAAAGCCTTAGAGGT...ACCACCCCGATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp ACCAGCACGGAAAGAGCCCCAAGATCTTGTGGCCATTCTGTTTTCCTCTTGGACCTTCTGTGGCAGCAATaGTATTCGGAGAGACCTTCC +
Preference number: 4 (lower is better)
Translates to: TSTERAPRSCGHSVFLLDLLWQQ*YSERPS
Trigger: GGAAGGTCTCTCCGAATAGCATTGCTGCCACAGAAG...GTCCAAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTTTCCGTGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp ACAAATGGGTTGTGGGATCGTGGGATTCTGCTGTGTCGGAAGCTTAGTCGATTGCAGCCAGAAGATTCGTaGTTCAGCTTCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: TNGLWDRGILLCRKLSRLQPEDS*FSFCGS
Trigger: GCTGCCACAGAAGCTGAAGCACGAATCTTCTGGCTG...CAATCGACTAAGCTTCCGACACAGCAGAATCCCACGATCCCACAACCCATTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572102.5
ENST00000572428.5
ENST00000619408.1
CDS-3UTR GCA 90 bp AAACCTCTAAGGCTTTATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGGTAGCCATACAGGTTTaGAGCTTGGAGAGAGATCCC +
Preference number: 4 (lower is better)
Translates to: KPLRLYDRRSTALQPSPRVAIQV*SLERDP
Trigger: GGGATCTCTCTCCAAGCTGCAAACCTGTATGGCTAC...CCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAAGCCTTAGAGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456096.6
ENST00000575135.5
CDS-3UTR GCA 90 bp CCACTGGTTATGAGCAAGATGGGTAGTGTGAGGTATTCCGGTCACTTTCAAAGATTAGCCACGCTGAAATaGTGGCTGGGGACCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PLVMSKMGSVRYSGHFQRLATLK*WLGTLL
Trigger: CAGCAGGGTCCCCAGCCAGCATTTCAGCGTGGCTAA...TCTTTGAAAGTGACCGGAATACCTCACACTACCCATCTTGCTCATAACCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp GTTGAGCCAGACCAAACCCACGTGCAGGCCACATTCAGCCAGTGGCAGCCATCAAATGTGTGTGTCATGTaGTCCCATTCGTATTTTAGG +
Preference number: 4 (lower is better)
Translates to: VEPDQTHVQATFSQWQPSNVCVM*SHSYFR
Trigger: CCTAAAATACGAATGGGAGCACATGACACACACATT...TGATGGCTGCCACTGGCTGAATGTGGCCTGCACGTGGGTTTGGTCTGGCTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp CTGCCAGGCGAGCAAGATCTTGCTCTCATGGATGAGGAAACGATCGGAAGGCTGATCGGAAGGCTGCTCTaGAAACTATTTCTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: LPGEQDLALMDEETIGRLIGRLL*KLFLLS
Trigger: GGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGAT...CAGCCTTCCGATCGTTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp CCACTGCATTGCAGCCATCCCCTCGGTTGCACAGACATTCCCTTTCTCGCACTTAAACGATCGGAAGGCTaGTCTGCAAACTATTTCTGC +
Preference number: 4 (lower is better)
Translates to: PLHCSHPLGCTDIPFLALKRSEG*SANYFC
Trigger: GCAGAAATAGTTTGCAGAGCAGCCTTCCGATCGTTT...AAGTGCGAGAAAGGGAATGTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp ACAAATGGGTTGTGGGATCGTGGGATTCTGCTGTGTCGGAAGCTTAGTCGATTGGGGATCGTGGGATTCTaGTGTGTCGGAAGCTTAGTC +
Preference number: 4 (lower is better)
Translates to: TNGLWDRGILLCRKLSRLGIVGF*CVGSLV
Trigger: GACTAAGCTTCCGACACAGCAGAATCCCACGATCCC...CAATCGACTAAGCTTCCGACACAGCAGAATCCCACGATCCCACAACCCATTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572102.5
ENST00000572428.5
ENST00000619408.1
CDS-3UTR CCA 90 bp ACAAATGGGTTGTGGGATCGTGGGATTCTGCTGTGTCGGAAGCTTAGTCGATTGTCGGAGAGACCTTCCTaGCTTCAAAGATCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: TNGLWDRGILLCRKLSRLSERPS*LQRSSG
Trigger: GCCACTGGATCTTTGAAGCCAGGAAGGTCTCTCCGA...CAATCGACTAAGCTTCCGACACAGCAGAATCCCACGATCCCACAACCCATTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572428.5
ENST00000619408.1
CDS-3UTR CCA 90 bp GCACGGAAAGAGCCCCAAGATCTTGTGGCCATTCTGTTTTCCTCTTGGACTGAAGTCTGGAACACTGTCTaGGACAGGAAACTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: ARKEPQDLVAILFSSWTEVWNTV*DRKLAV
Trigger: CACAGCCAGTTTCCTGTCCCAGACAGTGTTCCAGAC...TTCAGTCCAAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTTTCCGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp ACAAATGGGTTGTGGGATCGTGGGATTCTGCTGTGTCGGAAGCTTAGTCGATTGGTCTGGAACACTGTCTaGGACAGGAAACTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TNGLWDRGILLCRKLSRLVWNTV*DRKLAV
Trigger: CACAGCCAGTTTCCTGTCCCAGACAGTGTTCCAGAC...CAATCGACTAAGCTTCCGACACAGCAGAATCCCACGATCCCACAACCCATTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572428.5
ENST00000619408.1
CDS-3UTR CCA 90 bp AGCAAGATGGGTAGTGTGAGGTATTCCGGTCACTTTCAAAGACTCAGGGCATCACTTCTGAAAGTCACCTaGGCAGGCCGTCTGGAACAC +
Preference number: 4 (lower is better)
Translates to: SKMGSVRYSGHFQRLRASLLKVT*AGRLEH
Trigger: GTGTTCCAGACGGCCTGCCCAGGTGACTTTCAGAAG...TGATGCCCTGAGTCTTTGAAAGTGACCGGAATACCTCACACTACCCATCTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp AGTGAAGCGGGCTCAAGATCTTCCCATTGTCACCAGCACGGAAAGAGCCCCAAGTGGTCTCTGAGTTTGTaGCTGGGTTTTACTTGCCTA +
Preference number: 4 (lower is better)
Translates to: SEAGSRSSHCHQHGKSPKWSLSL*LGFTCL
Trigger: TAGGCAAGTAAAACCCAGCCACAAACTCAGAGACCA...CTTGGGGCTCTTTCCGTGCTGGTGACAATGGGAAGATCTTGAGCCCGCTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp CCATCTATAGATGGTCCGAGGAAGGCCGCAGCCACTGGTTATGAGCAAGATGGGTGGTCTCTGAGTTTGTaGCTGGGTTTTACTTGCCTA +
Preference number: 4 (lower is better)
Translates to: PSIDGPRKAAATGYEQDGWSLSL*LGFTCL
Trigger: TAGGCAAGTAAAACCCAGCCACAAACTCAGAGACCA...CCCATCTTGCTCATAACCAGTGGCTGCGGCCTTCCTCGGACCATCTATAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp TCCTGGGCCCATGTGGAAGCTGCTGAATCAGTTCTCTGTAGGGCCCTGGAACCTTGTTTGTTAAAGCTGTaGTCTCTGAGTTTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SWAHVEAAESVLCRALEPCLLKL*SLSLWL
Trigger: CAGCCACAAACTCAGAGACCACAGCTTTAACAAACA...AGGTTCCAGGGCCCTACAGAGAACTGATTCAGCAGCTTCCACATGGGCCCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp TTCCGGTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTATGGAAGCCACGCTGAAATGCTaGCTGGGGACCCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: FRSLSKTQGITDTGLFMEATLKC*LGTLLE
Trigger: TTCCAGCAGGGTCCCCAGCCAGCATTTCAGCGTGGC...TTCCATAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGACCGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp TTTCTACTTTGTTCTTCATTACGAGTGAAGCGGGCTCAAGATCTTCCCATTGTCGCTGGTGACCGGCCATaGGCAGTGCAGTCACTTGCC +
Preference number: 4 (lower is better)
Translates to: FLLCSSLRVKRAQDLPIVAGDRP*AVQSLA
Trigger: GGCAAGTGACTGCACTGCCCATGGCCGGTCACCAGC...GACAATGGGAAGATCTTGAGCCCGCTTCACTCGTAATGAAGAACAAAGTAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GAGGTGTCAGTGTTTGTTAAAGCTGTGGTCTCTGAGTTTGTGGCTGGGTTTTACGCTTCTTCCCCGACTTaGACTTCCCTGTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: EVSVFVKAVVSEFVAGFYASSPT*TSLSHR
Trigger: CCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGC...GTAAAACCCAGCCACAAACTCAGAGACCACAGCTTTAACAAACACTGACACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp ACCAGCACGGAAAGAGCCCCAAGATCTTGTGGCCATTCTGTTTTCCTCTTGGACATTTTCCTGACTCACTaGGCCATATGGGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: TSTERAPRSCGHSVFLLDIFLTH*AIWAPH
Trigger: ATGGGGAGCCCATATGGCCCAGTGAGTCAGGAAAAT...GTCCAAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTTTCCGTGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp CAGCCATCCCCTCGGTTGCACAGACATTCCCTTTCTCGCACTTTGATGCTGGAAATGAATGGATGTGATTaGGGACAGGAGCTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: QPSPRLHRHSLSRTLMLEMNGCD*GQELAA
Trigger: TGCTGCAAGCTCCTGTCCCCAATCACATCCATTCAT...TTCCAGCATCAAAGTGCGAGAAAGGGAATGTCTGTGCAACCGAGGGGATGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CCA 90 bp ACGATCGGAAGGCTGCTCTGCAAACTATTTCTGCTTTCCCAGGCAGCTTTTGCAAGGCAGCTTTTGCAGTaGCCGGAAGTGGTGATGAGA +
Preference number: 4 (lower is better)
Translates to: TIGRLLCKLFLLSQAAFARQLLQ*PEVVMR
Trigger: TCTCATCACCACTTCCGGCCACTGCAAAAGCTGCCT...TGCAAAAGCTGCCTGGGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGATCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CCA 90 bp GCACGGAAAGAGCCCCAAGATCTTGTGGCCATTCTGTTTTCCTCTTGGACTGAAGTTAGCGTGGCTCAATaGAATGTTCTCCCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: ARKEPQDLVAILFSSWTEVSVAQ*NVLPGA
Trigger: TGCACCGGGGAGAACATTCCATTGAGCCACGCTAAC...TTCAGTCCAAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTTTCCGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573360.5
CDS-3UTR CCA 90 bp GCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTGGGTTGTGGGATCGTaGGATTCTGCTGTGTCGGAA +
Preference number: 4 (lower is better)
Translates to: AYVLWRGHFLLWLKCELAWVVGS*DSAVSE
Trigger: TTCCGACACAGCAGAATCCCACGATCCCACAACCCA...GGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
CDS-3UTR CCA 90 bp ACAAATGGGTTGTGGGATCGTGGGATTCTGCTGTGTCGGAAGCTTAGTCGATTGTGGGTTGTGGGATCGTaGGATTCTGCTGTGTCGGAA +
Preference number: 4 (lower is better)
Translates to: TNGLWDRGILLCRKLSRLWVVGS*DSAVSE
Trigger: TTCCGACACAGCAGAATCCCACGATCCCACAACCCA...CAATCGACTAAGCTTCCGACACAGCAGAATCCCACGATCCCACAACCCATTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572102.5
ENST00000572428.5
ENST00000619408.1
CDS-3UTR CCA 90 bp CTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCAGCTCCGGGATGGGGTaGGTCACAGCAAAAGGACCA +
Preference number: 4 (lower is better)
Translates to: LWRGHFLLWLKCELALCSSSGMG*VTAKGP
Trigger: TGGTCCTTTTGCTGTGACCCACCCCATCCCGGAGCT...GGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
CDS-3UTR CCA 90 bp AAACCTCTAAGGCTTTATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGGTTCGAGCTGAGATTTaGATGGGGACACAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: KPLRLYDRRSTALQPSPRVRAEI*MGTQSQ
Trigger: TTGGCTCTGTGTCCCCATCCAAATCTCAGCTCGAAC...CCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAAGCCTTAGAGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR CAA 72 bp CGGATGGTCACTGAACTCCCTTTACCACTTCAGACTTaGCTGGGGGTGTTAGCGTGGCTCAATGGAATGTTC +
Preference number: 4 (lower is better)
Translates to: RMVTELPLPLQT*LGVLAWLNGMF
Trigger: GAACATTCCATTGAGCCACGCTAACACCCCCAGCAAAGTCTGAAGTGGTAAAGGGAGTTCAGTGACCATCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
CDS-3UTR TCA 90 bp AACGATCGGAAGGCTGCTCTGCAAACTATTTCTGCTTTCCCAGGCAGCTTTTGCACAGGAAACTGGCTGTaGCCTTGCCAATGTCACTGT +
Preference number: 4 (lower is better)
Translates to: NDRKAALQTISAFPGSFCTGNWL*PCQCHC
Trigger: ACAGTGACATTGGCAAGGTCACAGCCAGTTTCCTGT...GCAAAAGCTGCCTGGGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGATCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456096.6
ENST00000575135.5
CDS-3UTR TCA 90 bp ACAAATGGGTTGTGGGATCGTGGGATTCTGCTGTGTCGGAAGCTTAGTCGATTGACAGGAAACTGGCTGTaGCCTTGCCAATGTCACTGT +
Preference number: 4 (lower is better)
Translates to: TNGLWDRGILLCRKLSRLTGNWL*PCQCHC
Trigger: ACAGTGACATTGGCAAGGTCACAGCCAGTTTCCTGT...CAATCGACTAAGCTTCCGACACAGCAGAATCCCACGATCCCACAACCCATTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572428.5
ENST00000619408.1
CDS-3UTR TCA 90 bp CAGGGCATCACAGACACAGGTCTTTTTATGGAACTAGCCAGAGGATTCCACCCCTACTTTCCCGCCACTTaGCTCCAAATATCACTTGCC +
Preference number: 4 (lower is better)
Translates to: QGITDTGLFMELARGFHPYFPAT*LQISLA
Trigger: GGCAAGTGATATTTGGAGTCAAGTGGCGGGAAAGTA...GGGGTGGAATCCTCTGGCTAGTTCCATAAAAAGACCTGTGTCTGTGATGCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
CDS-3UTR GCA 90 bp AACGATCGGAAGGCTGCTCTGCAAACTATTTCTGCTTTCCCAGGCAGCTTTTGCCTTCTGTGGCAGCAATaGTATTCGGAGAGACCTTCC +
Preference number: 4 (lower is better)
Translates to: NDRKAALQTISAFPGSFCLLWQQ*YSERPS
Trigger: GGAAGGTCTCTCCGAATAGCATTGCTGCCACAGAAG...GCAAAAGCTGCCTGGGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGATCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp GCACAGACATTCCCTTTCTCGCACTTTGATGCTGGAATCACTGGTCTTTTCACCCAGCCAGAAGATTCGTaGTTCAGCTTCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: AQTFPFSHFDAGITGLFTQPEDS*FSFCGS
Trigger: GCTGCCACAGAAGCTGAAGCACGAATCTTCTGGCTG...GGTGAAAAGACCAGTGATTCCAGCATCAAAGTGCGAGAAAGGGAATGTCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp TGTGGGATCGTGGGATTCTGCTGTGTCGGAAGCTTAGTCGATTGTAGAAACTCCGTAGCCATACAGGTTTaGAGCTTGGAGAGAGATCCC +
Preference number: 4 (lower is better)
Translates to: CGIVGFCCVGSLVDCRNSVAIQV*SLERDP
Trigger: GGGATCTCTCTCCAAGCTGCAAACCTGTATGGCTAC...GGAGTTTCTACAATCGACTAAGCTTCCGACACAGCAGAATCCCACGATCCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572428.5
ENST00000619408.1
CDS-3UTR GCA 90 bp GGATGTCCGGAAAGAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCGGTGCCAATGTCACTGTTaGCTCCCATCTTACAAAGGA +
Preference number: 4 (lower is better)
Translates to: GCPERNQLLPQGEAAHHRCQCHC*LPSYKG
Trigger: TCCTTTGTAAGATGGGAGGCAACAGTGACATTGGCA...CCGATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTTCCGGACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456096.6
ENST00000575135.5
CDS-3UTR GCA 90 bp TGTGGGATCGTGGGATTCTGCTGTGTCGGAAGCTTAGTCGATTGTAGAAACTCCTCCATGAGTACTAAATaGAGATGCCTGTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: CGIVGFCCVGSLVDCRNSSMSTK*RCLWGR
Trigger: CCTGCCCCACAGGCATCTGCATTTAGTACTCATGGA...GGAGTTTCTACAATCGACTAAGCTTCCGACACAGCAGAATCCCACGATCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
CDS-3UTR GCA 90 bp AGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAAAATGTGTGTGTCATGTaGTCCCATTCGTATTTTAGG +
Preference number: 4 (lower is better)
Translates to: RLLPRLGLPCPTGRHSSENVCVM*SHSYFR
Trigger: CCTAAAATACGAATGGGAGCACATGACACACACATT...TTCACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp TGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCCTGAGAGAAACCTGGGTGTaGATAGGAGGGGACTGGAAC +
Preference number: 4 (lower is better)
Translates to: WRGHFLLWLKCELALCSLRETWV*IGGDWN
Trigger: GTTCCAGTCCCCTCCTATGCACACCCAGGTTTCTCT...CAGGGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp TTCCGGTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTATGGAAGGCAGTGCAGTCACTTaGCTGTTTCGCCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: FRSLSKTQGITDTGLFMEGSAVT*LFRQQL
Trigger: GAGCTGCTGGCGAAACAGGCAAGTGACTGCACTGCC...TTCCATAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGACCGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp GATGCTGGAATCACTGGTCTTTTCACCTTCGTAGGAGGTGTCACTCCAGGATGTTGGAGGCAGTTGGGCTaGATGAATGGATGTGATTGG +
Preference number: 4 (lower is better)
Translates to: DAGITGLFTFVGGVTPGCWRQLG*MNGCDW
Trigger: CCAATCACATCCATTCATGCAGCCCAACTGCCTCCA...ACATCCTGGAGTGACACCTCCTACGAAGGTGAAAAGACCAGTGATTCCAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp GGAATCACTGGTCTTTTCACCTTCGTAGGAGGTGTCACTCCAGGATGTCCGGAAAAAGAAATCAACTTCTaGCGCAAGGTGAAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GITGLFTFVGGVTPGCPEKEINF*RKVKLP
Trigger: GGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTT...TTCCGGACATCCTGGAGTGACACCTCCTACGAAGGTGAAAAGACCAGTGATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR GCA 90 bp CAAACCCTATCAGGGCAGAAACCTCTAAGGCTTTATGATCGCAGATCCACTGCAAGCCATCCCCTCGGTTaGACAGACATTCCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: QTLSGQKPLRLYDRRSTASHPLG*TDIPFL
Trigger: GAGAAAGGGAATGTCTGTGCAACCGAGGGGATGGCT...TGCAGTGGATCTGCGATCATAAAGCCTTAGAGGTTTCTGCCCTGATAGGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CCA 90 bp CAAACCCTATCAGGGCAGAAACCTCTAAGGCTTTATGATCGCAGATCCACTGCATCGGAGAGACCTTCCTaGCTTCAAAGATCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: QTLSGQKPLRLYDRRSTASERPS*LQRSSG
Trigger: GCCACTGGATCTTTGAAGCCAGGAAGGTCTCTCCGA...TGCAGTGGATCTGCGATCATAAAGCCTTAGAGGTTTCTGCCCTGATAGGGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CCA 90 bp AACGATCGGAAGGCTGCTCTGCAAACTATTTCTGCTTTCCCAGGCAGCTTTTGCGTGCTTCAGCTTCTGTaGCAGCAATGCTATTCGGAG +
Preference number: 4 (lower is better)
Translates to: NDRKAALQTISAFPGSFCVLQLL*QQCYSE
Trigger: CTCCGAATAGCATTGCTGCCACAGAAGCTGAAGCAC...GCAAAAGCTGCCTGGGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGATCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CCA 90 bp TGTGGGATCGTGGGATTCTGCTGTGTCGGAAGCTTAGTCGATTGTAGAAACTCCGTGCTTCAGCTTCTGTaGCAGCAATGCTATTCGGAG +
Preference number: 4 (lower is better)
Translates to: CGIVGFCCVGSLVDCRNSVLQLL*QQCYSE
Trigger: CTCCGAATAGCATTGCTGCCACAGAAGCTGAAGCAC...GGAGTTTCTACAATCGACTAAGCTTCCGACACAGCAGAATCCCACGATCCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572102.5
ENST00000572428.5
ENST00000619408.1
CDS-3UTR CCA 90 bp GCACGGAAAGAGCCCCAAGATCTTGTGGCCATTCTGTTTTCCTCTTGGACTGAATACAGGTTTGCAGCTTaGAGAGAGATCCCAGCAACC +
Preference number: 4 (lower is better)
Translates to: ARKEPQDLVAILFSSWTEYRFAA*REIPAT
Trigger: GGTTGCTGGGATCTCTCTCCAAGCTGCAAACCTGTA...TTCAGTCCAAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTTTCCGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GATGAGGAAACGATCGGAAGGCTGCTCTGCAAACTATTTCTGCTTTCCCAGGCATACAGGTTTGCAGCTTaGAGAGAGATCCCAGCAACC +
Preference number: 4 (lower is better)
Translates to: DEETIGRLLCKLFLLSQAYRFAA*REIPAT
Trigger: GGTTGCTGGGATCTCTCTCCAAGCTGCAAACCTGTA...TGCCTGGGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGATCGTTTCCTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456096.6
ENST00000575135.5
CDS-3UTR CCA 90 bp ACAAATGGGTTGTGGGATCGTGGGATTCTGCTGTGTCGGAAGCTTAGTCGATTGTACAGGTTTGCAGCTTaGAGAGAGATCCCAGCAACC +
Preference number: 4 (lower is better)
Translates to: TNGLWDRGILLCRKLSRLYRFAA*REIPAT
Trigger: GGTTGCTGGGATCTCTCTCCAAGCTGCAAACCTGTA...CAATCGACTAAGCTTCCGACACAGCAGAATCCCACGATCCCACAACCCATTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572428.5
ENST00000619408.1
CDS-3UTR CCA 90 bp GCACAGACATTCCCTTTCTCGCACTTTGATGCTGGAATCACTGGTCTTTTCACCGTCTGGAACACTGTCTaGGACAGGAAACTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: AQTFPFSHFDAGITGLFTVWNTV*DRKLAV
Trigger: CACAGCCAGTTTCCTGTCCCAGACAGTGTTCCAGAC...GGTGAAAAGACCAGTGATTCCAGCATCAAAGTGCGAGAAAGGGAATGTCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456096.6
ENST00000575135.5
CDS-3UTR CCA 90 bp CCATTAGCACTCTATGCCTGTCGTCTTGTTTTCCAGGAATCCAAGAGTTTTGTAGCCACGCTGAAATGCTaGCTGGGGACCCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: PLALYACRLVFQESKSFVATLKC*LGTLLE
Trigger: TTCCAGCAGGGTCCCCAGCCAGCATTTCAGCGTGGC...TACAAAACTCTTGGATTCCTGGAAAACAAGACGACAGGCATAGAGTGCTAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp AGCAAGATGGGTAGTGTGAGGTATTCCGGTCACTTTCAAAGACTCAGGGCATCACTGTCCACCTGGCTCTaGGATAACATGGTCCTAGAG +
Preference number: 4 (lower is better)
Translates to: SKMGSVRYSGHFQRLRASLSTWL*DNMVLE
Trigger: CTCTAGGACCATGTTATCCCAGAGCCAGGTGGACAG...TGATGCCCTGAGTCTTTGAAAGTGACCGGAATACCTCACACTACCCATCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp TGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCCTGTGTGTCCTGTCCACCTaGCTCTGGGATAACATGGTC +
Preference number: 4 (lower is better)
Translates to: WRGHFLLWLKCELALCSLCVLST*LWDNMV
Trigger: GACCATGTTATCCCAGAGCCAGGTGGACAGGACACA...CAGGGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTATGGAACTAGCGCTTCTTCCCCGACTTaGACTTCCCTGTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: VTFKDSGHHRHRSFYGTSASSPT*TSLSHR
Trigger: CCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGC...GCTAGTTCCATAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp TTCAGAGTAAGTATTTCCATGAGTACTAAATGCAGATGCCTGTGGGGCAGGAAGGCTTCTTCCCCGACTTaGACTTCCCTGTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: FRVSISMSTKCRCLWGRKASSPT*TSLSHR
Trigger: CCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGC...CTTCCTGCCCCACAGGCATCTGCATTTAGTACTCATGGAAATACTTACTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp TTCAGAGTAAGTATTTCCATGAGTACTAAATGCAGATGCCTGTGGGGCAGGAAGACTCACTGGGCCATATaGGCTCCCCATCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: FRVSISMSTKCRCLWGRKTHWAI*APHLPP
Trigger: TGGTGGGAGATGGGGAGCCCATATGGCCCAGTGAGT...CTTCCTGCCCCACAGGCATCTGCATTTAGTACTCATGGAAATACTTACTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp AGGTATTCCGGTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTAACTCACTGGGCCATATaGGCTCCCCATCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: RYSGHFQRLRASQTQVFLTHWAI*APHLPP
Trigger: TGGTGGGAGATGGGGAGCCCATATGGCCCAGTGAGT...TAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGACCGGAATACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp TATTTCTGCTTTCCCAGGCAGCTTTTGCAGTGGCCGGAAGTGGTGATGAGAGCTATGAATGGATGTGATTaGGGACAGGAGCTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: YFCFPRQLLQWPEVVMRAMNGCD*GQELAA
Trigger: TGCTGCAAGCTCCTGTCCCCAATCACATCCATTCAT...AGCTCTCATCACCACTTCCGGCCACTGCAAAAGCTGCCTGGGAAAGCAGAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CCA 90 bp TGCTGGAATCACTGGTCTTTTCACCTTCGTAGGAGGTGTCACTCCAGGATGTCCATGAATGGATGTGATTaGGGACAGGAGCTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: CWNHWSFHLRRRCHSRMSMNGCD*GQELAA
Trigger: TGCTGCAAGCTCCTGTCCCCAATCACATCCATTCAT...GGACATCCTGGAGTGACACCTCCTACGAAGGTGAAAAGACCAGTGATTCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CCA 90 bp TATTTCTGCTTTCCCAGGCAGCTTTTGCAGTGGCCGGAAGTGGTGATGAGAGCTTCTCCTCTGGGGACATaGTGGCAAAGAGTTACAGAT +
Preference number: 4 (lower is better)
Translates to: YFCFPRQLLQWPEVVMRASPLGT*WQRVTD
Trigger: ATCTGTAACTCTTTGCCACCATGTCCCCAGAGGAGA...AGCTCTCATCACCACTTCCGGCCACTGCAAAAGCTGCCTGGGAAAGCAGAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR CCA 90 bp AGCAAGATGGGTAGTGTGAGGTATTCCGGTCACTTTCAAAGACTCAGGGCATCACACTTCAGTCTCCTCTaGGGACATGGTGGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: SKMGSVRYSGHFQRLRASHFSLL*GHGGKE
Trigger: CTCTTTGCCACCATGTCCCCAGAGGAGACTGAAGTG...TGATGCCCTGAGTCTTTGAAAGTGACCGGAATACCTCACACTACCCATCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR CCA 90 bp CAAACCCTATCAGGGCAGAAACCTCTAAGGCTTTATGATCGCAGATCCACTGCAGTTAGCGTGGCTCAATaGAATGTTCTCCCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: QTLSGQKPLRLYDRRSTAVSVAQ*NVLPGA
Trigger: TGCACCGGGGAGAACATTCCATTGAGCCACGCTAAC...TGCAGTGGATCTGCGATCATAAAGCCTTAGAGGTTTCTGCCCTGATAGGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR CCA 90 bp AGCAGGCAGAATGTGTGTGTCATGTGCTCCCATTCGTATTTTAGGTATATGAGAGAGCGAGGCACTCACTaGGCAGCACATCCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: SRQNVCVMCSHSYFRYMRERGTH*AAHPAR
Trigger: TCTGGCTGGATGTGCTGCCCAGTGAGTGCCTCGCTC...TCTCATATACCTAAAATACGAATGGGAGCACATGACACACACATTCTGCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
CDS-3UTR CCA 90 bp TGTGGGATCGTGGGATTCTGCTGTGTCGGAAGCTTAGTCGATTGTAGAAACTCCGATAAGAAAGCCGTCTaGAACACTGTCTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: CGIVGFCCVGSLVDCRNSDKKAV*NTVWDR
Trigger: CCTGTCCCAGACAGTGTTCCAGACGGCTTTCTTATC...GGAGTTTCTACAATCGACTAAGCTTCCGACACAGCAGAATCCCACGATCCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619408.1
3UTR CAA 72 bp AAACCTCTAAGGCTTTATGATCGCAGATCCACTGCATaGCAGCCATCCCCTCGGTTGCACAGACATTCCCTT +
Preference number: 4 (lower is better)
Translates to: KPLRLYDRRSTA*QPSPRLHRHSL
Trigger: AAGGGAATGTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAAGCCTTAGAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
3UTR CAA 72 bp TCCTCCCCTTCGAAGAATCCAGTACTTTCCCGCCACTaGACTCCAAATATCACTTGCCCTCTTCGAAACACG +
Preference number: 4 (lower is better)
Translates to: SSPSKNPVLSRH*TPNITCPLRNT
Trigger: CGTGTTTCGAAGAGGGCAAGTGATATTTGGAGTCAAGTGGCGGGAAAGTACTGGATTCTTCGAAGGGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
CDS-3UTR TCA 90 bp TATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCCTCATGGGGCAGATTATaGGGCCCAGCCAGAAGATTC +
Preference number: 4 (lower is better)
Translates to: YGEDISCYGSSANWPYVPSWGRL*GPARRF
Trigger: GAATCTTCTGGCTGGGCCTCATAATCTGCCCCATGA...GGGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp TCATGGATGAGGAAACGATCGGAAGGCTGCTCTGCAAACTATTTCTGCTTTCCCGCAAGATGGGTAGTGTaGGGTATTCCGGTCACTTTC +
Preference number: 4 (lower is better)
Translates to: SWMRKRSEGCSANYFCFPARWVV*GIPVTF
Trigger: GAAAGTGACCGGAATACCTCACACTACCCATCTTGC...GGGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGATCGTTTCCTCATCCATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR TCA 90 bp GCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCGAAGCCAGGAGTCCATaGGAAATCTCTCAATGTGTG +
Preference number: 4 (lower is better)
Translates to: AYVLWRGHFLLWLKCELAEARSP*EISQCV
Trigger: CACACATTGAGAGATTTCTCATGGACTCCTGGCTTC...GGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp CAGGATGTCCGGAAAGAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCACCTCTAAGGCTTTATaGTCGCAGATCCACTGCATT +
Preference number: 4 (lower is better)
Translates to: QDVRKEINFCRKVKLPIITSKAL*SQIHCI
Trigger: AATGCAGTGGATCTGCGATCATAAAGCCTTAGAGGT...GATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTTCCGGACATCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR TCA 90 bp GATGAGGAAACGATCGGAAGGCTGCTCTGCAAACTATTTCTGCTTTCCCAGGCACGGTCATCTTTGAAGTaGAACGTGACAGCAGTCACT +
Preference number: 4 (lower is better)
Translates to: DEETIGRLLCKLFLLSQARSSLK*NVTAVT
Trigger: AGTGACTGCTGTCACGTTTCACTTCAAAGATGACCG...TGCCTGGGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGATCGTTTCCTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR TCA 90 bp GATGCTGGAATCACTGGTCTTTTCACCTTCGTAGGAGGTGTCACTCCAGGATGTTACTTTCCCGCCACTTaGCTCCAAATATCACTTGCC +
Preference number: 4 (lower is better)
Translates to: DAGITGLFTFVGGVTPGCYFPAT*LQISLA
Trigger: GGCAAGTGATATTTGGAGTCAAGTGGCGGGAAAGTA...ACATCCTGGAGTGACACCTCCTACGAAGGTGAAAAGACCAGTGATTCCAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR TCA 90 bp TTCCGGTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTATGGAATCTCCCCGGTGCATATaGCGCAGAAACTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: FRSLSKTQGITDTGLFMESPRCI*RRNSGC
Trigger: ACAGCCTGAGTTTCTGCGTCATATGCACCGGGGAGA...TTCCATAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGACCGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
CDS-3UTR GCA 90 bp CCACTGGTTATGAGCAAGATGGGTAGTGTGAGGTATTCCGGTCACTTTCAAAGACAGCCAGAAGATTCGTaGTTCAGCTTCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PLVMSKMGSVRYSGHFQRQPEDS*FSFCGS
Trigger: GCTGCCACAGAAGCTGAAGCACGAATCTTCTGGCTG...TCTTTGAAAGTGACCGGAATACCTCACACTACCCATCTTGCTCATAACCAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
ENST00000649981.1
CDS-3UTR GCA 90 bp CAGGGCATCACAGACACAGGTCTTTTTATGGAACTAGCCAGAGGATTCCACCCCGCCATTAGCACTCTATaGCTGTCGTCTTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: QGITDTGLFMELARGFHPAISTL*LSSCFP
Trigger: TGGAAAACAAGACGACAGGCATAGAGTGCTAATGGC...GGGGTGGAATCCTCTGGCTAGTTCCATAAAAAGACCTGTGTCTGTGATGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
ENST00000649981.1
CDS-3UTR GCA 90 bp AGCAGGCAGAATGTGTGTGTCATGTGCTCCCATTCGTATTTTAGGTATATGAGAACCGGCCATGGGCAGTaGAGTCACTTGCCTGTTTCG +
Preference number: 4 (lower is better)
Translates to: SRQNVCVMCSHSYFRYMRTGHGQ*SHLPVS
Trigger: CGAAACAGGCAAGTGACTGCACTGCCCATGGCCGGT...TCTCATATACCTAAAATACGAATGGGAGCACATGACACACACATTCTGCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp AGCAAGATGGGTAGTGTGAGGTATTCCGGTCACTTTCAAAGACTCAGGGCATCATGGAGGCAGTTGGGCTaGATGAATGGATGTGATTGG +
Preference number: 4 (lower is better)
Translates to: SKMGSVRYSGHFQRLRASWRQLG*MNGCDW
Trigger: CCAATCACATCCATTCATGCAGCCCAACTGCCTCCA...TGATGCCCTGAGTCTTTGAAAGTGACCGGAATACCTCACACTACCCATCTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR GCA 90 bp ATGGCTGGGAAGGCCCCAGGAAACTTAACAATCATGGTGGAAGGCAAAGCAGGCTCTGCAAACTATTTCTaGTTTCCCAGGCAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: MAGKAPGNLTIMVEGKAGSANYF*FPRQLL
Trigger: CAAAAGCTGCCTGGGAAAGCAGAAATAGTTTGCAGA...GCCTGCTTTGCCTTCCACCATGATTGTTAAGTTTCCTGGGGCCTTCCCAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR GCA 90 bp TCATGGATGAGGAAACGATCGGAAGGCTGCTCTGCAAACTATTTCTGCTTTCCCCATGTCATCGGGGAATaGGTGTTCCTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SWMRKRSEGCSANYFCFPHVIGE*VFLILA
Trigger: AGCCAAGATCAGGAACACGCATTCCCCGATGACATG...GGGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGATCGTTTCCTCATCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR GCA 90 bp CTACTTTGTTCTTCATTACGAGTGAAGCGGGCTCAAGATCTTCCCATTGTCACCAGCAAAAGGACCAGATaGTGGTGTGGTCCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LLCSSLRVKRAQDLPIVTSKRTR*WCGPKP
Trigger: TGGCTTCGGACCACACCAGCATCTGGTCCTTTTGCT...GGTGACAATGGGAAGATCTTGAGCCCGCTTCACTCGTAATGAAGAACAAAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
CDS-3UTR GCA 90 bp CCTTTCTCGCACTTTGATGCTGGAATCACTGGTCTTTTCACCTTCGTAGGAGGTATTGATTCACAGTTCTaGATGGCTGGGAAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PFSHFDAGITGLFTFVGGIDSQF*MAGKAP
Trigger: TGGGGCCTTCCCAGCCATGCAGAACTGTGAATCAAT...ACCTCCTACGAAGGTGAAAAGACCAGTGATTCCAGCATCAAAGTGCGAGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR CCA 90 bp TCATGGATGAGGAAACGATCGGAAGGCTGCTCTGCAAACTATTTCTGCTTTCCCTACAGGTTTGCAGCTTaGAGAGAGATCCCAGCAACC +
Preference number: 4 (lower is better)
Translates to: SWMRKRSEGCSANYFCFPYRFAA*REIPAT
Trigger: GGTTGCTGGGATCTCTCTCCAAGCTGCAAACCTGTA...GGGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGATCGTTTCCTCATCCATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456096.6
ENST00000575135.5
CDS-3UTR CCA 90 bp TTCCGGTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTATGGAATCCTCCATCTATAGATaGTCCGAGGAAGGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: FRSLSKTQGITDTGLFMESSIYR*SEEGRS
Trigger: GCTGCGGCCTTCCTCGGACCATCTATAGATGGAGGA...TTCCATAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGACCGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
ENST00000649981.1
CDS-3UTR CCA 90 bp GCACGGAAAGAGCCCCAAGATCTTGTGGCCATTCTGTTTTCCTCTTGGACTGAACCAGCCTGGCTAACATaGAGAAACACTGTCTCTACT +
Preference number: 4 (lower is better)
Translates to: ARKEPQDLVAILFSSWTEPAWLT*RNTVST
Trigger: AGTAGAGACAGTGTTTCTCCATGTTAGCCAGGCTGG...TTCAGTCCAAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTTTCCGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp TTTGTTAAAGCTGTGGTCTCTGAGTTTGTGGCTGGGTTTTACTTGCCTAGAAGAGTGTGGAAGGACAGGTaGGTGGTGGGGTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: FVKAVVSEFVAGFYLPRRVWKDR*VVGSVM
Trigger: CATCACAGACCCCACCACCCACCTGTCCTTCCACAC...TCTTCTAGGCAAGTAAAACCCAGCCACAAACTCAGAGACCACAGCTTTAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp CAGGGCATCACAGACACAGGTCTTTTTATGGAACTAGCCAGAGGATTCCACCCCAAATGCAGATGCCTGTaGGGCAGGAAGCAACATAAA +
Preference number: 4 (lower is better)
Translates to: QGITDTGLFMELARGFHPKCRCL*GRKQHK
Trigger: TTTATGTTGCTTCCTGCCCCACAGGCATCTGCATTT...GGGGTGGAATCCTCTGGCTAGTTCCATAAAAAGACCTGTGTCTGTGATGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp ACGGCCAGTTCCCTAAAGGTAAAGGTTGGGTTTTTCCACCACCAGTCACTGAGCAGCCCCAAGATCTTGTaGCCATTCTGTTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: TASSLKVKVGFFHHQSLSSPKIL*PFCFPL
Trigger: AAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCT...GCTCAGTGACTGGTGGTGGAAAAACCCAACCTTTACCTTTAGGGAACTGGCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573360.5
CDS-3UTR CCA 90 bp ACCAGCACGGAAAGAGCCCCAAGATCTTGTGGCCATTCTGTTTTCCTCTTGGACTCCCTGAGACCCCACTaGTCTTTTCTACTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: TSTERAPRSCGHSVFLLDSLRPH*SFLLCS
Trigger: AGAACAAAGTAGAAAAGACCAGTGGGGTCTCAGGGA...GTCCAAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTTTCCGTGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp CAGGGCATCACAGACACAGGTCTTTTTATGGAACTAGCCAGAGGATTCCACCCCTCCCTGAGACCCCACTaGTCTTTTCTACTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: QGITDTGLFMELARGFHPSLRPH*SFLLCS
Trigger: AGAACAAAGTAGAAAAGACCAGTGGGGTCTCAGGGA...GGGGTGGAATCCTCTGGCTAGTTCCATAAAAAGACCTGTGTCTGTGATGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp TTAGCACTCTATGCCTGTCGTCTTGTTTTCCAGGAATCCAAGAGTTTTGTAATCGCCACGCTGAAATGCTaGCTGGGGACCCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LALYACRLVFQESKSFVIATLKC*LGTLLE
Trigger: TTCCAGCAGGGTCCCCAGCCAGCATTTCAGCGTGGC...GATTACAAAACTCTTGGATTCCTGGAAAACAAGACGACAGGCATAGAGTGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTATGGAACTAGCTGCATAGGAGGGGACTaGAACAATGGCCACATGGCG +
Preference number: 4 (lower is better)
Translates to: VTFKDSGHHRHRSFYGTSCIGGD*NNGHMA
Trigger: CGCCATGTGGCCATTGTTCCAGTCCCCTCCTATGCA...GCTAGTTCCATAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GAGGTGTCAGTGTTTGTTAAAGCTGTGGTCTCTGAGTTTGTGGCTGGGTTTTACTGTGTCCTGTCCACCTaGCTCTGGGATAACATGGTC +
Preference number: 4 (lower is better)
Translates to: EVSVFVKAVVSEFVAGFYCVLST*LWDNMV
Trigger: GACCATGTTATCCCAGAGCCAGGTGGACAGGACACA...GTAAAACCCAGCCACAAACTCAGAGACCACAGCTTTAACAAACACTGACACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp ACAGAGTTTTTGTGTTTAAATACCCTCTACTTGAGGTACGCCCTATATAAACGAAGGTCCACCCACGACTaGGGGCTGGCAGGGCAGACT +
Preference number: 4 (lower is better)
Translates to: TEFLCLNTLYLRYALYKRRSTHD*GLAGQT
Trigger: AGTCTGCCCTGCCAGCCCCCAGTCGTGGGTGGACCT...TCGTTTATATAGGGCGTACCTCAAGTAGAGGGTATTTAAACACAAAAACTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp CCACTGGTTATGAGCAAGATGGGTAGTGTGAGGTATTCCGGTCACTTTCAAAGAGACCAGATGCTGGTGTaGTCCGAAGCCACTTTCTCA +
Preference number: 4 (lower is better)
Translates to: PLVMSKMGSVRYSGHFQRDQMLV*SEATFS
Trigger: TGAGAAAGTGGCTTCGGACCACACCAGCATCTGGTC...TCTTTGAAAGTGACCGGAATACCTCACACTACCCATCTTGCTCATAACCAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
CDS-3UTR CCA 90 bp AGCAAGATGGGTAGTGTGAGGTATTCCGGTCACTTTCAAAGACTCAGGGCATCAAAAAGGACCAGATGCTaGTGTGGTCCGAAGCCACTT +
Preference number: 4 (lower is better)
Translates to: SKMGSVRYSGHFQRLRASKRTRC*CGPKPL
Trigger: AAGTGGCTTCGGACCACACCAGCATCTGGTCCTTTT...TGATGCCCTGAGTCTTTGAAAGTGACCGGAATACCTCACACTACCCATCTTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
CDS-3UTR CCA 90 bp CCACTGGTTATGAGCAAGATGGGTAGTGTGAGGTATTCCGGTCACTTTCAAAGAACAGTTCTGCATGGCTaGGAAGGCCCCAGGAAACTT +
Preference number: 4 (lower is better)
Translates to: PLVMSKMGSVRYSGHFQRTVLHG*EGPRKL
Trigger: AAGTTTCCTGGGGCCTTCCCAGCCATGCAGAACTGT...TCTTTGAAAGTGACCGGAATACCTCACACTACCCATCTTGCTCATAACCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR CCA 90 bp AGGTATTCCGGTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTAAGCATATATGTGTGTTaGGGGCTGGGGAGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: RYSGHFQRLRASQTQVFLSIYVC*GLGSPL
Trigger: CAGAGGGCTCCCCAGCCCCCAACACACATATATGCT...TAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGACCGGAATACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649981.1
3UTR CAA 72 bp AGGAAGGTCCCTGAGACCCCACTGGTCTTTTCTACTTaGTTCTTCATTACGAGTGAAGCGGGCTCAAGATCT +
Preference number: 4 (lower is better)
Translates to: RKVPETPLVFST*FFITSEAGSRS
Trigger: AGATCTTGAGCCCGCTTCACTCGTAATGAAGAACAAAGTAGAAAAGACCAGTGGGGTCTCAGGGACCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp TTCCGGTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTATGGAATCATGGGGCAGATTATaGGGCCCAGCCAGAAGATTC +
Preference number: 4 (lower is better)
Translates to: FRSLSKTQGITDTGLFMESWGRL*GPARRF
Trigger: GAATCTTCTGGCTGGGCCTCATAATCTGCCCCATGA...TTCCATAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGACCGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
ENST00000649981.1
CDS-3UTR TCA 90 bp TGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCCTGGTTCTTCATTACGAGTaGAGCGGGCTCAAGATCTTC +
Preference number: 4 (lower is better)
Translates to: WRGHFLLWLKCELALCSLVLHYE*SGLKIF
Trigger: GAAGATCTTGAGCCCGCTTCACTCGTAATGAAGAAC...CAGGGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp TATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCCGTAGCCATACAGGTTTaGAGCTTGGAGAGAGATCCC +
Preference number: 4 (lower is better)
Translates to: YGEDISCYGSSANWPYVPVAIQV*SLERDP
Trigger: GGGATCTCTCTCCAAGCTGCAAACCTGTATGGCTAC...GGGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp GCACGGAAAGAGCCCCAAGATCTTGTGGCCATTCTGTTTTCCTCTTGGACTGAATGCCAATGTCACTGTTaGCTCCCATCTTACAAAGGA +
Preference number: 4 (lower is better)
Translates to: ARKEPQDLVAILFSSWTECQCHC*LPSYKG
Trigger: TCCTTTGTAAGATGGGAGGCAACAGTGACATTGGCA...TTCAGTCCAAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTTTCCGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp GATGAGGAAACGATCGGAAGGCTGCTCTGCAAACTATTTCTGCTTTCCCAGGCATGCCAATGTCACTGTTaGCTCCCATCTTACAAAGGA +
Preference number: 4 (lower is better)
Translates to: DEETIGRLLCKLFLLSQACQCHC*LPSYKG
Trigger: TCCTTTGTAAGATGGGAGGCAACAGTGACATTGGCA...TGCCTGGGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGATCGTTTCCTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456096.6
ENST00000575135.5
CDS-3UTR GCA 90 bp GGCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCTGCCAATGTCACTGTTaGCTCCCATCTTACAAAGGA +
Preference number: 4 (lower is better)
Translates to: GIRPMERTFPVMAQVRIGCQCHC*LPSYKG
Trigger: TCCTTTGTAAGATGGGAGGCAACAGTGACATTGGCA...GCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp TGTGGGATCGTGGGATTCTGCTGTGTCGGAAGCTTAGTCGATTGTAGAAACTCCTGCCAATGTCACTGTTaGCTCCCATCTTACAAAGGA +
Preference number: 4 (lower is better)
Translates to: CGIVGFCCVGSLVDCRNSCQCHC*LPSYKG
Trigger: TCCTTTGTAAGATGGGAGGCAACAGTGACATTGGCA...GGAGTTTCTACAATCGACTAAGCTTCCGACACAGCAGAATCCCACGATCCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572428.5
ENST00000619408.1
CDS-3UTR GCA 90 bp AGCAAGATGGGTAGTGTGAGGTATTCCGGTCACTTTCAAAGACTCAGGGCATCAAGTACTAAATGCAGATaGCTGTGGGGCAGGAAGCAA +
Preference number: 4 (lower is better)
Translates to: SKMGSVRYSGHFQRLRASSTKCR*LWGRKQ
Trigger: TTGCTTCCTGCCCCACAGGCATCTGCATTTAGTACT...TGATGCCCTGAGTCTTTGAAAGTGACCGGAATACCTCACACTACCCATCTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp ACGATCGGAAGGCTGCTCTGCAAACTATTTCTGCTTTCCCAGGCAGCTTTTGCAAAACGATCGGAAGGCTaGTCTGCAAACTATTTCTGC +
Preference number: 4 (lower is better)
Translates to: TIGRLLCKLFLLSQAAFAKRSEG*SANYFC
Trigger: GCAGAAATAGTTTGCAGAGCAGCCTTCCGATCGTTT...TGCAAAAGCTGCCTGGGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGATCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CCA 90 bp GAGGTGTCAGTGTTTGTTAAAGCTGTGGTCTCTGAGTTTGTGGCTGGGTTTTACGTGCTTCAGCTTCTGTaGCAGCAATGCTATTCGGAG +
Preference number: 4 (lower is better)
Translates to: EVSVFVKAVVSEFVAGFYVLQLL*QQCYSE
Trigger: CTCCGAATAGCATTGCTGCCACAGAAGCTGAAGCAC...GTAAAACCCAGCCACAAACTCAGAGACCACAGCTTTAACAAACACTGACACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GCACGGAAAGAGCCCCAAGATCTTGTGGCCATTCTGTTTTCCTCTTGGACTGAATGGTCTCTGAGTTTGTaGCTGGGTTTTACTTGCCTA +
Preference number: 4 (lower is better)
Translates to: ARKEPQDLVAILFSSWTEWSLSL*LGFTCL
Trigger: TAGGCAAGTAAAACCCAGCCACAAACTCAGAGACCA...TTCAGTCCAAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTTTCCGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCAAATGCAGATGCCTGTaGGGCAGGAAGCAACATAAA +
Preference number: 4 (lower is better)
Translates to: AYVLWRGHFLLWLKCELAKCRCL*GRKQHK
Trigger: TTTATGTTGCTTCCTGCCCCACAGGCATCTGCATTT...GGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCAGCCCCAAGATCTTGTaGCCATTCTGTTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: AYVLWRGHFLLWLKCELASPKIL*PFCFPL
Trigger: AAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCT...GGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTCCCTGAGACCCCACTaGTCTTTTCTACTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: AYVLWRGHFLLWLKCELASLRPH*SFLLCS
Trigger: AGAACAAAGTAGAAAAGACCAGTGGGGTCTCAGGGA...GGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GCACGGAAAGAGCCCCAAGATCTTGTGGCCATTCTGTTTTCCTCTTGGACTGAATCCCTGAGACCCCACTaGTCTTTTCTACTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: ARKEPQDLVAILFSSWTESLRPH*SFLLCS
Trigger: AGAACAAAGTAGAAAAGACCAGTGGGGTCTCAGGGA...TTCAGTCCAAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTTTCCGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GGCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCAGCCCTTTTCGGACTTaGCCTTTTATGCCATATCCT +
Preference number: 4 (lower is better)
Translates to: GIRPMERTFPVMAQVRIGSPFRT*PFMPYP
Trigger: AGGATATGGCATAAAAGGCCAAGTCCGAAAAGGGCT...GCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp TTTCTACTTTGTTCTTCATTACGAGTGAAGCGGGCTCAAGATCTTCCCATTGTCTGCATAGGAGGGGACTaGAACAATGGCCACATGGCG +
Preference number: 4 (lower is better)
Translates to: FLLCSSLRVKRAQDLPIVCIGGD*NNGHMA
Trigger: CGCCATGTGGCCATTGTTCCAGTCCCCTCCTATGCA...GACAATGGGAAGATCTTGAGCCCGCTTCACTCGTAATGAAGAACAAAGTAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp CCATTAGCACTCTATGCCTGTCGTCTTGTTTTCCAGGAATCCAAGAGTTTTGTATGCATAGGAGGGGACTaGAACAATGGCCACATGGCG +
Preference number: 4 (lower is better)
Translates to: PLALYACRLVFQESKSFVCIGGD*NNGHMA
Trigger: CGCCATGTGGCCATTGTTCCAGTCCCCTCCTATGCA...TACAAAACTCTTGGATTCCTGGAAAACAAGACGACAGGCATAGAGTGCTAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp TGCTTCAGCTTCTGTGGCAGCAATGCTATTCGGAGAGACCTTCCTGGCTTCAAACCTAAAGGTAAAGGTTaGGTTTTTCCACCACCAGTC +
Preference number: 4 (lower is better)
Translates to: CFSFCGSNAIRRDLPGFKPKGKG*VFPPPV
Trigger: GACTGGTGGTGGAAAAACCCAACCTTTACCTTTAGG...TTTGAAGCCAGGAAGGTCTCTCCGAATAGCATTGCTGCCACAGAAGCTGAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
CDS-3UTR CCA 90 bp GCACGGAAAGAGCCCCAAGATCTTGTGGCCATTCTGTTTTCCTCTTGGACTGAAAAAACAAATGGGTTGTaGGATCGTGGGATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: ARKEPQDLVAILFSSWTEKTNGL*DRGILL
Trigger: CAGCAGAATCCCACGATCCCACAACCCATTTGTTTT...TTCAGTCCAAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTTTCCGTGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
CDS-3UTR CCA 90 bp ACAAATGGGTTGTGGGATCGTGGGATTCTGCTGTGTCGGAAGCTTAGTCGATTGAAAACAAATGGGTTGTaGGATCGTGGGATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: TNGLWDRGILLCRKLSRLKTNGL*DRGILL
Trigger: CAGCAGAATCCCACGATCCCACAACCCATTTGTTTT...CAATCGACTAAGCTTCCGACACAGCAGAATCCCACGATCCCACAACCCATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572102.5
ENST00000572428.5
ENST00000619408.1
CDS-3UTR CCA 90 bp TTCTGCTGTGTCGGAAGCTTAGTCGATTGTAGAAACTCCCGTTTAAGCCATTTCGACCAGATGCTGGTGTaGTCCGAAGCCACTTTCTCA +
Preference number: 4 (lower is better)
Translates to: FCCVGSLVDCRNSRLSHFDQMLV*SEATFS
Trigger: TGAGAAAGTGGCTTCGGACCACACCAGCATCTGGTC...GAAATGGCTTAAACGGGAGTTTCTACAATCGACTAAGCTTCCGACACAGCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
CDS-3UTR TCA 90 bp CAGTGTTTGTTAAAGCTGTGGTCTCTGAGTTTGTGGCTGGGTTTTACTTGCCTAGCAAGATGGGTAGTGTaGGGTATTCCGGTCACTTTC +
Preference number: 4 (lower is better)
Translates to: QCLLKLWSLSLWLGFTCLARWVV*GIPVTF
Trigger: GAAAGTGACCGGAATACCTCACACTACCCATCTTGC...TAGGCAAGTAAAACCCAGCCACAAACTCAGAGACCACAGCTTTAACAAACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp CAGGGCATCACAGACACAGGTCTTTTTATGGAACTAGCCAGAGGATTCCACCCCAACCATGTGCATTCATaGTCCTTTCACTCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: QGITDTGLFMELARGFHPNHVHS*SFHSKA
Trigger: AGCTTTTGAGTGAAAGGATCATGAATGCACATGGTT...GGGGTGGAATCCTCTGGCTAGTTCCATAAAAAGACCTGTGTCTGTGATGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp CTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCCGGTCATCTTTGAAGTaGAACGTGACAGCAGTCACT +
Preference number: 4 (lower is better)
Translates to: LWRGHFLLWLKCELALCSRSSLK*NVTAVT
Trigger: AGTGACTGCTGTCACGTTTCACTTCAAAGATGACCG...GGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573360.5
CDS-3UTR GCA 90 bp CCATTAGCACTCTATGCCTGTCGTCTTGTTTTCCAGGAATCCAAGAGTTTTGTAAGAGAAACCTGGGTGTaGATAGGAGGGGACTGGAAC +
Preference number: 4 (lower is better)
Translates to: PLALYACRLVFQESKSFVRETWV*IGGDWN
Trigger: GTTCCAGTCCCCTCCTATGCACACCCAGGTTTCTCT...TACAAAACTCTTGGATTCCTGGAAAACAAGACGACAGGCATAGAGTGCTAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp TTTGTTAAAGCTGTGGTCTCTGAGTTTGTGGCTGGGTTTTACTTGCCTAGAAGAAGCAAAAGGACCAGATaGTGGTGTGGTCCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: FVKAVVSEFVAGFYLPRRSKRTR*WCGPKP
Trigger: TGGCTTCGGACCACACCAGCATCTGGTCCTTTTGCT...TCTTCTAGGCAAGTAAAACCCAGCCACAAACTCAGAGACCACAGCTTTAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
CDS-3UTR CCA 90 bp TTTGTTAAAGCTGTGGTCTCTGAGTTTGTGGCTGGGTTTTACTTGCCTAGAAGATCGGAGAGACCTTCCTaGCTTCAAAGATCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: FVKAVVSEFVAGFYLPRRSERPS*LQRSSG
Trigger: GCCACTGGATCTTTGAAGCCAGGAAGGTCTCTCCGA...TCTTCTAGGCAAGTAAAACCCAGCCACAAACTCAGAGACCACAGCTTTAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GGACAGGGCTGTCAAGGGGTAGACAAGCCATTAGCACTCTATGCCTGTCGTCTTCCAGCACAGATGACCTaGAAGATAAAATTATACACA +
Preference number: 4 (lower is better)
Translates to: GQGCQGVDKPLALYACRLPAQMT*KIKLYT
Trigger: TGTGTATAATTTTATCTTCCAGGTCATCTGTGCTGG...AAGACGACAGGCATAGAGTGCTAATGGCTTGTCTACCCCTTGACAGCCCTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp ACAGAGTTTTTGTGTTTAAATACCCTCTACTTGAGGTACGCCCTATATAAACGACGACCAGCTCCGGGATaGGGTGGGTCACAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: TEFLCLNTLYLRYALYKRRPAPG*GGSQQK
Trigger: CTTTTGCTGTGACCCACCCCATCCCGGAGCTGGTCG...TCGTTTATATAGGGCGTACCTCAAGTAGAGGGTATTTAAACACAAAAACTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
CDS-3UTR CCA 90 bp CCATTAGCACTCTATGCCTGTCGTCTTGTTTTCCAGGAATCCAAGAGTTTTGTAATGCCTGGGATCTCTTaGAACAGGGCTGTGCTCACA +
Preference number: 4 (lower is better)
Translates to: PLALYACRLVFQESKSFVMPGIS*NRAVLT
Trigger: TGTGAGCACAGCCCTGTTCCAAGAGATCCCAGGCAT...TACAAAACTCTTGGATTCCTGGAAAACAAGACGACAGGCATAGAGTGCTAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR TCA 90 bp TTAGCACTCTATGCCTGTCGTCTTGTTTTCCAGGAATCCAAGAGTTTTGTAATCTCATGGGGCAGATTATaGGGCCCAGCCAGAAGATTC +
Preference number: 4 (lower is better)
Translates to: LALYACRLVFQESKSFVISWGRL*GPARRF
Trigger: GAATCTTCTGGCTGGGCCTCATAATCTGCCCCATGA...GATTACAAAACTCTTGGATTCCTGGAAAACAAGACGACAGGCATAGAGTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
ENST00000649981.1
CDS-3UTR TCA 90 bp AGCAGGCAGAATGTGTGTGTCATGTGCTCCCATTCGTATTTTAGGTATATGAGAGCAAGATGGGTAGTGTaGGGTATTCCGGTCACTTTC +
Preference number: 4 (lower is better)
Translates to: SRQNVCVMCSHSYFRYMRARWVV*GIPVTF
Trigger: GAAAGTGACCGGAATACCTCACACTACCCATCTTGC...TCTCATATACCTAAAATACGAATGGGAGCACATGACACACACATTCTGCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp GTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTATGGAACTAGCGAAGCCAGGAGTCCATaGGAAATCTCTCAATGTGTG +
Preference number: 4 (lower is better)
Translates to: VTFKDSGHHRHRSFYGTSEARSP*EISQCV
Trigger: CACACATTGAGAGATTTCTCATGGACTCCTGGCTTC...GCTAGTTCCATAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp AGGTATTCCGGTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTAGTTCTTCATTACGAGTaGAGCGGGCTCAAGATCTTC +
Preference number: 4 (lower is better)
Translates to: RYSGHFQRLRASQTQVFLVLHYE*SGLKIF
Trigger: GAAGATCTTGAGCCCGCTTCACTCGTAATGAAGAAC...TAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGACCGGAATACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp TTCCGGTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTATGGAATGTGTAAAATGCAGGTaGCAGTGGTGCCTAGTGAGA +
Preference number: 4 (lower is better)
Translates to: FRSLSKTQGITDTGLFMECVKCR*QWCLVR
Trigger: TCTCACTAGGCACCACTGTCACCTGCATTTTACACA...TTCCATAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGACCGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR GCA 90 bp CCATTAGCACTCTATGCCTGTCGTCTTGTTTTCCAGGAATCCAAGAGTTTTGTACTTCTGTGGCAGCAATaGTATTCGGAGAGACCTTCC +
Preference number: 4 (lower is better)
Translates to: PLALYACRLVFQESKSFVLLWQQ*YSERPS
Trigger: GGAAGGTCTCTCCGAATAGCATTGCTGCCACAGAAG...TACAAAACTCTTGGATTCCTGGAAAACAAGACGACAGGCATAGAGTGCTAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
ENST00000649981.1
CDS-3UTR GCA 90 bp CTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCGCCATTAGCACTCTATaGCTGTCGTCTTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LWRGHFLLWLKCELALCSAISTL*LSSCFP
Trigger: TGGAAAACAAGACGACAGGCATAGAGTGCTAATGGC...GGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp ACCCTATCAGGGCAGAAACCTCTAAGGCTTTATGATCGCAGATCCACTGCATTGTCTGCAAACTATTTCTaGTTTCCCAGGCAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: TLSGQKPLRLYDRRSTALSANYF*FPRQLL
Trigger: CAAAAGCTGCCTGGGAAAGCAGAAATAGTTTGCAGA...CAATGCAGTGGATCTGCGATCATAAAGCCTTAGAGGTTTCTGCCCTGATAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CCA 90 bp TTTGTTAAAGCTGTGGTCTCTGAGTTTGTGGCTGGGTTTTACTTGCCTAGAAGATACAGGTTTGCAGCTTaGAGAGAGATCCCAGCAACC +
Preference number: 4 (lower is better)
Translates to: FVKAVVSEFVAGFYLPRRYRFAA*REIPAT
Trigger: GGTTGCTGGGATCTCTCTCCAAGCTGCAAACCTGTA...TCTTCTAGGCAAGTAAAACCCAGCCACAAACTCAGAGACCACAGCTTTAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp AGCAGGCAGAATGTGTGTGTCATGTGCTCCCATTCGTATTTTAGGTATATGAGATACAGGTTTGCAGCTTaGAGAGAGATCCCAGCAACC +
Preference number: 4 (lower is better)
Translates to: SRQNVCVMCSHSYFRYMRYRFAA*REIPAT
Trigger: GGTTGCTGGGATCTCTCTCCAAGCTGCAAACCTGTA...TCTCATATACCTAAAATACGAATGGGAGCACATGACACACACATTCTGCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp TTCCGGTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTATGGAACCAGCCTGGCTAACATaGAGAAACACTGTCTCTACT +
Preference number: 4 (lower is better)
Translates to: FRSLSKTQGITDTGLFMEPAWLT*RNTVST
Trigger: AGTAGAGACAGTGTTTCTCCATGTTAGCCAGGCTGG...TTCCATAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGACCGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp TTAGCACTCTATGCCTGTCGTCTTGTTTTCCAGGAATCCAAGAGTTTTGTAATCACTCCTGGGCCCATGTaGAAGCTGCTGAATCAGTTC +
Preference number: 4 (lower is better)
Translates to: LALYACRLVFQESKSFVITPGPM*KLLNQF
Trigger: GAACTGATTCAGCAGCTTCCACATGGGCCCAGGAGT...GATTACAAAACTCTTGGATTCCTGGAAAACAAGACGACAGGCATAGAGTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp TCTGGAAAGACACCTAGAACACTAGTAGCCCTTTTCGGACTTGGCCTTTTATGCAGCCCTTTTCGGACTTaGCCTTTTATGCCATATCCT +
Preference number: 4 (lower is better)
Translates to: SGKTPRTLVALFGLGLLCSPFRT*PFMPYP
Trigger: AGGATATGGCATAAAAGGCCAAGTCCGAAAAGGGCT...GCATAAAAGGCCAAGTCCGAAAAGGGCTACTAGTGTTCTAGGTGTCTTTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp TTAGCACTCTATGCCTGTCGTCTTGTTTTCCAGGAATCCAAGAGTTTTGTAATCCCTCTGGGGACATGGTaGCAAAGAGTTACAGATGCC +
Preference number: 4 (lower is better)
Translates to: LALYACRLVFQESKSFVIPLGTW*QRVTDA
Trigger: GGCATCTGTAACTCTTTGCCACCATGTCCCCAGAGG...GATTACAAAACTCTTGGATTCCTGGAAAACAAGACGACAGGCATAGAGTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR CCA 90 bp TTCCGGTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTATGGAACAAGAGCTAAGCGGATaGTCACTGAACTCCCTTTAC +
Preference number: 4 (lower is better)
Translates to: FRSLSKTQGITDTGLFMEQELSG*SLNSLY
Trigger: GTAAAGGGAGTTCAGTGACCATCCGCTTAGCTCTTG...TTCCATAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGACCGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
CDS-3UTR CCA 90 bp AGCAGGCAGAATGTGTGTGTCATGTGCTCCCATTCGTATTTTAGGTATATGAGAAAAAGGACCAGATGCTaGTGTGGTCCGAAGCCACTT +
Preference number: 4 (lower is better)
Translates to: SRQNVCVMCSHSYFRYMRKRTRC*CGPKPL
Trigger: AAGTGGCTTCGGACCACACCAGCATCTGGTCCTTTT...TCTCATATACCTAAAATACGAATGGGAGCACATGACACACACATTCTGCCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572102.5
ENST00000572428.5
CDS-3UTR TCA 90 bp ACAGAGTTTTTGTGTTTAAATACCCTCTACTTGAGGTACGCCCTATATAAACGATGGAAGGAAGGTCCCTaGGACCCCACTGGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: TEFLCLNTLYLRYALYKRWKEGP*DPTGLF
Trigger: GAAAAGACCAGTGGGGTCTCAGGGACCTTCCTTCCA...TCGTTTATATAGGGCGTACCTCAAGTAGAGGGTATTTAAACACAAAAACTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp AGGTATTCCGGTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTAACCTCTAAGGCTTTATaGTCGCAGATCCACTGCATT +
Preference number: 4 (lower is better)
Translates to: RYSGHFQRLRASQTQVFLTSKAL*SQIHCI
Trigger: AATGCAGTGGATCTGCGATCATAAAGCCTTAGAGGT...TAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGACCGGAATACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR GCA 90 bp AGGTATTCCGGTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTAGCCATTAGCACTCTATaGCTGTCGTCTTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: RYSGHFQRLRASQTQVFLAISTL*LSSCFP
Trigger: TGGAAAACAAGACGACAGGCATAGAGTGCTAATGGC...TAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGACCGGAATACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
ENST00000649981.1
CDS-3UTR GCA 90 bp TTTCTACTTTGTTCTTCATTACGAGTGAAGCGGGCTCAAGATCTTCCCATTGTCAGTACTAAATGCAGATaGCTGTGGGGCAGGAAGCAA +
Preference number: 4 (lower is better)
Translates to: FLLCSSLRVKRAQDLPIVSTKCR*LWGRKQ
Trigger: TTGCTTCCTGCCCCACAGGCATCTGCATTTAGTACT...GACAATGGGAAGATCTTGAGCCCGCTTCACTCGTAATGAAGAACAAAGTAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp TTAGCACTCTATGCCTGTCGTCTTGTTTTCCAGGAATCCAAGAGTTTTGTAATCTCCATGAGTACTAAATaGAGATGCCTGTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LALYACRLVFQESKSFVISMSTK*RCLWGR
Trigger: CCTGCCCCACAGGCATCTGCATTTAGTACTCATGGA...GATTACAAAACTCTTGGATTCCTGGAAAACAAGACGACAGGCATAGAGTGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp TTCAGAGTAAGTATTTCCATGAGTACTAAATGCAGATGCCTGTGGGGCAGGAAGGCTAATCTCTTAAAATaGAGACTCCTGGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: FRVSISMSTKCRCLWGRKANLLK*RLLGPC
Trigger: ACATGGGCCCAGGAGTCTGCATTTTAAGAGATTAGC...CTTCCTGCCCCACAGGCATCTGCATTTAGTACTCATGGAAATACTTACTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp AGGTATTCCGGTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTATGGTCTCTGAGTTTGTaGCTGGGTTTTACTTGCCTA +
Preference number: 4 (lower is better)
Translates to: RYSGHFQRLRASQTQVFLWSLSL*LGFTCL
Trigger: TAGGCAAGTAAAACCCAGCCACAAACTCAGAGACCA...TAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGACCGGAATACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp TTCCGGTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTATGGAAAGCCCCAAGATCTTGTaGCCATTCTGTTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: FRSLSKTQGITDTGLFMESPKIL*PFCFPL
Trigger: AAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCT...TTCCATAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGACCGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp GGCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCCAGCACAGATGACCTaGAAGATAAAATTATACACA +
Preference number: 4 (lower is better)
Translates to: GIRPMERTFPVMAQVRIGPAQMT*KIKLYT
Trigger: TGTGTATAATTTTATCTTCCAGGTCATCTGTGCTGG...GCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp CAGTGTTTGTTAAAGCTGTGGTCTCTGAGTTTGTGGCTGGGTTTTACTTGCCTACCTAAAGGTAAAGGTTaGGTTTTTCCACCACCAGTC +
Preference number: 4 (lower is better)
Translates to: QCLLKLWSLSLWLGFTCLPKGKG*VFPPPV
Trigger: GACTGGTGGTGGAAAAACCCAACCTTTACCTTTAGG...TAGGCAAGTAAAACCCAGCCACAAACTCAGAGACCACAGCTTTAACAAACACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573360.5
CDS-3UTR TCA 90 bp CAGTGTTTGTTAAAGCTGTGGTCTCTGAGTTTGTGGCTGGGTTTTACTTGCCTATTTCTGTACACCACCTaGTTATTTAGCCACGCTGAA +
Preference number: 4 (lower is better)
Translates to: QCLLKLWSLSLWLGFTCLFLYTT*LFSHAE
Trigger: TTCAGCGTGGCTAAATAATCAGGTGGTGTACAGAAA...TAGGCAAGTAAAACCCAGCCACAAACTCAGAGACCACAGCTTTAACAAACACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp TTAGCACTCTATGCCTGTCGTCTTGTTTTCCAGGAATCCAAGAGTTTTGTAATCAGTACTAAATGCAGATaGCTGTGGGGCAGGAAGCAA +
Preference number: 4 (lower is better)
Translates to: LALYACRLVFQESKSFVISTKCR*LWGRKQ
Trigger: TTGCTTCCTGCCCCACAGGCATCTGCATTTAGTACT...GATTACAAAACTCTTGGATTCCTGGAAAACAAGACGACAGGCATAGAGTGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp TATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCCAATGTGTGTGTCATGTaGTCCCATTCGTATTTTAGG +
Preference number: 4 (lower is better)
Translates to: YGEDISCYGSSANWPYVPNVCVM*SHSYFR
Trigger: CCTAAAATACGAATGGGAGCACATGACACACACATT...GGGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp CCATTAGCACTCTATGCCTGTCGTCTTGTTTTCCAGGAATCCAAGAGTTTTGTAATCGGAAGGCTGCTCTaGAAACTATTTCTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: PLALYACRLVFQESKSFVIGRLL*KLFLLS
Trigger: GGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGAT...TACAAAACTCTTGGATTCCTGGAAAACAAGACGACAGGCATAGAGTGCTAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR CCA 90 bp GTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTATGGAACTAGCTGTTTGTTAAAGCTGTaGTCTCTGAGTTTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VTFKDSGHHRHRSFYGTSCLLKL*SLSLWL
Trigger: CAGCCACAAACTCAGAGACCACAGCTTTAACAAACA...GCTAGTTCCATAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp TTTGTTAAAGCTGTGGTCTCTGAGTTTGTGGCTGGGTTTTACTTGCCTAGAAGAAAATGCAGATGCCTGTaGGGCAGGAAGCAACATAAA +
Preference number: 4 (lower is better)
Translates to: FVKAVVSEFVAGFYLPRRKCRCL*GRKQHK
Trigger: TTTATGTTGCTTCCTGCCCCACAGGCATCTGCATTT...TCTTCTAGGCAAGTAAAACCCAGCCACAAACTCAGAGACCACAGCTTTAACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp TTTCTACTTTGTTCTTCATTACGAGTGAAGCGGGCTCAAGATCTTCCCATTGTCAGCCCTTTTCGGACTTaGCCTTTTATGCCATATCCT +
Preference number: 4 (lower is better)
Translates to: FLLCSSLRVKRAQDLPIVSPFRT*PFMPYP
Trigger: AGGATATGGCATAAAAGGCCAAGTCCGAAAAGGGCT...GACAATGGGAAGATCTTGAGCCCGCTTCACTCGTAATGAAGAACAAAGTAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp ACAGAGTTTTTGTGTTTAAATACCCTCTACTTGAGGTACGCCCTATATAAACGAGCAAGATGGGTAGTGTaGGGTATTCCGGTCACTTTC +
Preference number: 4 (lower is better)
Translates to: TEFLCLNTLYLRYALYKRARWVV*GIPVTF
Trigger: GAAAGTGACCGGAATACCTCACACTACCCATCTTGC...TCGTTTATATAGGGCGTACCTCAAGTAGAGGGTATTTAAACACAAAAACTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp TTCAGAGTAAGTATTTCCATGAGTACTAAATGCAGATGCCTGTGGGGCAGGAAGGTTTTCCTCTTGGACTaGATTGTCTTCCGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: FRVSISMSTKCRCLWGRKVFLLD*IVFRLF
Trigger: AAACAAACGGAAGACAATTCAGTCCAAGAGGAAAAC...CTTCCTGCCCCACAGGCATCTGCATTTAGTACTCATGGAAATACTTACTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR GCA 90 bp AGGTATTCCGGTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTAAATGTGTGTGTCATGTaGTCCCATTCGTATTTTAGG +
Preference number: 4 (lower is better)
Translates to: RYSGHFQRLRASQTQVFLNVCVM*SHSYFR
Trigger: CCTAAAATACGAATGGGAGCACATGACACACACATT...TAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGACCGGAATACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp ACAGAGTTTTTGTGTTTAAATACCCTCTACTTGAGGTACGCCCTATATAAACGAATTTTCCTGACTCACTaGGCCATATGGGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: TEFLCLNTLYLRYALYKRIFLTH*AIWAPH
Trigger: ATGGGGAGCCCATATGGCCCAGTGAGTCAGGAAAAT...TCGTTTATATAGGGCGTACCTCAAGTAGAGGGTATTTAAACACAAAAACTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp CCATTAGCACTCTATGCCTGTCGTCTTGTTTTCCAGGAATCCAAGAGTTTTGTAGTTTTCCTCTTGGACTaGATTGTCTTCCGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: PLALYACRLVFQESKSFVVFLLD*IVFRLF
Trigger: AAACAAACGGAAGACAATTCAGTCCAAGAGGAAAAC...TACAAAACTCTTGGATTCCTGGAAAACAAGACGACAGGCATAGAGTGCTAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp ACAGAGTTTTTGTGTTTAAATACCCTCTACTTGAGGTACGCCCTATATAAACGAGTTCTTCATTACGAGTaGAGCGGGCTCAAGATCTTC +
Preference number: 4 (lower is better)
Translates to: TEFLCLNTLYLRYALYKRVLHYE*SGLKIF
Trigger: GAAGATCTTGAGCCCGCTTCACTCGTAATGAAGAAC...TCGTTTATATAGGGCGTACCTCAAGTAGAGGGTATTTAAACACAAAAACTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp TTTCTACTTTGTTCTTCATTACGAGTGAAGCGGGCTCAAGATCTTCCCATTGTCAACCATGTGCATTCATaGTCCTTTCACTCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: FLLCSSLRVKRAQDLPIVNHVHS*SFHSKA
Trigger: AGCTTTTGAGTGAAAGGATCATGAATGCACATGGTT...GACAATGGGAAGATCTTGAGCCCGCTTCACTCGTAATGAAGAACAAAGTAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR TCA 90 bp TTAGCACTCTATGCCTGTCGTCTTGTTTTCCAGGAATCCAAGAGTTTTGTAATCAACCATGTGCATTCATaGTCCTTTCACTCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: LALYACRLVFQESKSFVINHVHS*SFHSKA
Trigger: AGCTTTTGAGTGAAAGGATCATGAATGCACATGGTT...GATTACAAAACTCTTGGATTCCTGGAAAACAAGACGACAGGCATAGAGTGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CCA 90 bp TTAGCACTCTATGCCTGTCGTCTTGTTTTCCAGGAATCCAAGAGTTTTGTAATCCCAGCACAGATGACCTaGAAGATAAAATTATACACA +
Preference number: 4 (lower is better)
Translates to: LALYACRLVFQESKSFVIPAQMT*KIKLYT
Trigger: TGTGTATAATTTTATCTTCCAGGTCATCTGTGCTGG...GATTACAAAACTCTTGGATTCCTGGAAAACAAGACGACAGGCATAGAGTGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp TCAGGCCTGGGGAGTGGGCAGAGCAAGCTGATGGCAGGTCCACCCACGACTGGGGGGCAGTGCAGTCACTaGCCTGTTTCGCCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: SGLGSGQSKLMAGPPTTGGQCSH*PVSPAA
Trigger: AGCTGCTGGCGAAACAGGCAAGTGACTGCACTGCCC...CCCAGTCGTGGGTGGACCTGCCATCAGCTTGCTCTGCCCACTCCCCAGGCCTGA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp TCAGGCCTGGGGAGTGGGCAGAGCAAGCTGATGGCAGGTCCACCCACGACTGGGGGCTTCTTCCCCGACTaGGACTTCCCTGTCCCACAG +
Preference number: 5 (lower is better)
Translates to: SGLGSGQSKLMAGPPTTGGFFPD*DFPVPQ
Trigger: CTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCC...CCCAGTCGTGGGTGGACCTGCCATCAGCTTGCTCTGCCCACTCCCCAGGCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp CTCAGGCCTGGGGAGTGGGCAGAGCAAGCTGATGGCAGGTCCACCCACGACTGGTGGAATCCCAGCACTTaGGGTGAAGGAGGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: LRPGEWAEQADGRSTHDWWNPST*GEGGRQ
Trigger: CTGCCTGCCTCCTTCACCCAAAGTGCTGGGATTCCA...CCAGTCGTGGGTGGACCTGCCATCAGCTTGCTCTGCCCACTCCCCAGGCCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp CTGAGGCTGGTGACCGGCCATGGGCAGTGCAGTCACTTGCCTGTTTCGCCAGCAGGGCAGTGCAGTCACTaGCCTGTTTCGCCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: LRLVTGHGQCSHLPVSPAGQCSH*PVSPAA
Trigger: AGCTGCTGGCGAAACAGGCAAGTGACTGCACTGCCC...TGCTGGCGAAACAGGCAAGTGACTGCACTGCCCATGGCCGGTCACCAGCCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp CTGAGGCTGGTGACCGGCCATGGGCAGTGCAGTCACTTGCCTGTTTCGCCAGCAGGCTTCTTCCCCGACTaGGACTTCCCTGTCCCACAG +
Preference number: 5 (lower is better)
Translates to: LRLVTGHGQCSHLPVSPAGFFPD*DFPVPQ
Trigger: CTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCC...TGCTGGCGAAACAGGCAAGTGACTGCACTGCCCATGGCCGGTCACCAGCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp GGCTTCATCTGTCCTAAGTGCAAGGTGAGGGCGCGTGGGGCTGCCAGGCGAGCATTTCCCAGGCAGCTTTaGCAGTGGCCGGAAGTGGTG +
Preference number: 5 (lower is better)
Translates to: GFICPKCKVRARGAARRAFPRQL*QWPEVV
Trigger: CACCACTTCCGGCCACTGCAAAAGCTGCCTGGGAAA...TGCTCGCCTGGCAGCCCCACGCGCCCTCACCTTGCACTTAGGACAGATGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CAA 90 bp AGTGGCTTCATCTGTCCTAAGTGCAAGGTGAGGGCGCGTGGGGCTGCCAGGCGACAGCCCACAAAGCTCTaGCTGAACCAGTCGCAGCTC +
Preference number: 5 (lower is better)
Translates to: SGFICPKCKVRARGAARRQPTKL*LNQSQL
Trigger: GAGCTGCGACTGGTTCAGCAAGAGCTTTGTGGGCTG...TCGCCTGGCAGCCCCACGCGCCCTCACCTTGCACTTAGGACAGATGAAGCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CAA 90 bp CTCAGGCCTGGGGAGTGGGCAGAGCAAGCTGATGGCAGGTCCACCCACGACTGGTGTAGCCATACAGGTTaGCAGCTTGGAGAGAGATCC +
Preference number: 5 (lower is better)
Translates to: LRPGEWAEQADGRSTHDWCSHTG*QLGERS
Trigger: GGATCTCTCTCCAAGCTGCAAACCTGTATGGCTACA...CCAGTCGTGGGTGGACCTGCCATCAGCTTGCTCTGCCCACTCCCCAGGCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp GGCGCGTGGGGCTGCCAGGCGAGCAAGATCTTGCTCTCATGGATGAGGAAACGATCTGCCGAGATGGGATaGGTGGGCAGGACGTTTGTC +
Preference number: 5 (lower is better)
Translates to: GAWGCQASKILLSWMRKRSAEMG*VGRTFV
Trigger: GACAAACGTCCTGCCCACCAATCCCATCTCGGCAGA...TCGTTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTGGCAGCCCCACGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CAA 90 bp GCGTGGGGCTGCCAGGCGAGCAAGATCTTGCTCTCATGGATGAGGAAACGATCGGGCCCCTGGAGGCAGTaGGGCTGCATGAATGGATGT +
Preference number: 5 (lower is better)
Translates to: AWGCQASKILLSWMRKRSGPWRQ*GCMNGC
Trigger: ACATCCATTCATGCAGCCCAACTGCCTCCAGGGGCC...CGATCGTTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTGGCAGCCCCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CAA 90 bp GTGCTAGGTAGGAACCCCTCCTGGGGTTCACCTGAGGCTGGTGACCGGCCATGGAAACTGGCTGTGACCTaGCCAATGTCACTGTTGCCT +
Preference number: 5 (lower is better)
Translates to: VLGRNPSWGSPEAGDRPWKLAVT*PMSLLP
Trigger: AGGCAACAGTGACATTGGCAAGGTCACAGCCAGTTT...CCATGGCCGGTCACCAGCCTCAGGTGAACCCCAGGAGGGGTTCCTACCTAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp GTGCTAGGTAGGAACCCCTCCTGGGGTTCACCTGAGGCTGGTGACCGGCCATGGCTGTGGTCTCTGAGTTaGTGGCTGGGTTTTACTTGC +
Preference number: 5 (lower is better)
Translates to: VLGRNPSWGSPEAGDRPWLWSLS*WLGFTC
Trigger: GCAAGTAAAACCCAGCCACAAACTCAGAGACCACAG...CCATGGCCGGTCACCAGCCTCAGGTGAACCCCAGGAGGGGTTCCTACCTAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp GGTGACCGGCCATGGGCAGTGCAGTCACTTGCCTGTTTCGCCAGCAGCTCAGGCCTCAAGATCTTCCCATaGTCACCAGCACGGAAAGAG +
Preference number: 5 (lower is better)
Translates to: GDRPWAVQSLACFASSSGLKIFP*SPARKE
Trigger: CTCTTTCCGTGCTGGTGACAATGGGAAGATCTTGAG...GCCTGAGCTGCTGGCGAAACAGGCAAGTGACTGCACTGCCCATGGCCGGTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp AGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAAGGGCAGTGCAGTCACTaGCCTGTTTCGCCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: RLLPRLGLPCPTGRHSSEGQCSH*PVSPAA
Trigger: AGCTGCTGGCGAAACAGGCAAGTGACTGCACTGCCC...TTCACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp GCCCACAAAGCTCTTGCTGAACCAGTCGCAGCTCACGTAGGTGACGATGGCACTGGCTTCTTCCCCGACTaGGACTTCCCTGTCCCACAG +
Preference number: 5 (lower is better)
Translates to: AHKALAEPVAAHVGDDGTGFFPD*DFPVPQ
Trigger: CTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCC...AGTGCCATCGTCACCTACGTGAGCTGCGACTGGTTCAGCAAGAGCTTTGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573360.5
CDS-3UTR CAA 90 bp TCCTGGGCCCATGTGGAAGCTGCTGAATCAGTTCTCTGTAGGGCCCTGGAACCTCAGCCCACAAAGCTCTaGCTGAACCAGTCGCAGCTC +
Preference number: 5 (lower is better)
Translates to: SWAHVEAAESVLCRALEPQPTKL*LNQSQL
Trigger: GAGCTGCGACTGGTTCAGCAAGAGCTTTGTGGGCTG...AGGTTCCAGGGCCCTACAGAGAACTGATTCAGCAGCTTCCACATGGGCCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299866.13
ENST00000573360.5
CDS-3UTR CAA 90 bp AGTGAAGCGGGCTCAAGATCTTCCCATTGTCACCAGCACGGAAAGAGCCCCAAGTTGACCCCTAGCCCCTaGTGTCCTGTCCACCTGGCT +
Preference number: 5 (lower is better)
Translates to: SEAGSRSSHCHQHGKSPKLTPSP*CPVHLA
Trigger: AGCCAGGTGGACAGGACACAAGGGGCTAGGGGTCAA...CTTGGGGCTCTTTCCGTGCTGGTGACAATGGGAAGATCTTGAGCCCGCTTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp TGCAAGGTGAGGGCGCGTGGGGCTGCCAGGCGAGCAAGATCTTGCTCTCATGGATGGTGGGCAGGACGTTaGTCAGGGGAAACATCTAAT +
Preference number: 5 (lower is better)
Translates to: CKVRARGAARRARSCSHGWWAGR*SGETSN
Trigger: ATTAGATGTTTCCCCTGACAAACGTCCTGCCCACCA...TCCATGAGAGCAAGATCTTGCTCGCCTGGCAGCCCCACGCGCCCTCACCTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456096.6
ENST00000575135.5
CDS-3UTR CAA 90 bp AGTGGCTTCATCTGTCCTAAGTGCAAGGTGAGGGCGCGTGGGGCTGCCAGGCGACAGGCGAGCAAGATCTaGCTCTCATGGATGAGGAAA +
Preference number: 5 (lower is better)
Translates to: SGFICPKCKVRARGAARRQASKI*LSWMRK
Trigger: TTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTG...TCGCCTGGCAGCCCCACGCGCCCTCACCTTGCACTTAGGACAGATGAAGCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CAA 90 bp AAAGGTGGCCAAGGGGTGTCTAGGAAAGGACCCAGAAGGCGCCCTCACTCCAAGCAGCCATCCCCTCGGTaGCACAGACATTCCCTTTCT +
Preference number: 5 (lower is better)
Translates to: KGGQGVSRKGPRRRPHSKQPSPR*HRHSLS
Trigger: AGAAAGGGAATGTCTGTGCAACCGAGGGGATGGCTG...CTTGGAGTGAGGGCGCCTTCTGGGTCCTTTCCTAGACACCCCTTGGCCACCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS GCA 90 bp CTCTGGGGACATGGTGGCAAAGAGTTACAGATGCCAGCGCTCTGGTaGTATGGGTCCTGGTCCCGGTGTGCTAATGCTGGTGAATCTCCA +
Preference number: 5 (lower is better)
Translates to: LWGHGGKELQMPALW*YGSWSRCANAGESP
Trigger: TGGAGATTCACCAGCATTAGCACACCGGGACCAGGACCCATAGCACCAGAGCGCTGGCATCTGTAACTCTTTGCCACCATGTCCCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573857.5
CDS GCA 90 bp AGCACTTCAGTCTCCTCTGGGGACATGGTGGCAAAGAGTTACAGATaGCAGCGCTCTGGTGCTATGGGTCCTGGTCCCGGTGTGCTAATG +
Preference number: 5 (lower is better)
Translates to: STSVSSGDMVAKSYR*QRSGAMGPGPGVLM
Trigger: CATTAGCACACCGGGACCAGGACCCATAGCACCAGAGCGCTGGCATCTGTAACTCTTTGCCACCATGTCCCCAGAGGAGACTGAAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573857.5
CDS CCA 90 bp GCCAGCCTGCACCTCTGCCACAGTTCAGCTCTGCCGAGATGGGATTaGTGGGCAGGACGTTTGTCAGGGGAAACATCTAATGCTGGTGAA +
Preference number: 5 (lower is better)
Translates to: ASLHLCHSSALPRWD*WAGRLSGETSNAGE
Trigger: TTCACCAGCATTAGATGTTTCCCCTGACAAACGTCCTGCCCACCAATCCCATCTCGGCAGAGCTGAACTGTGGCAGAGGTGCAGGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000572980.5
ENST00000575135.5
CDS CCA 90 bp CTCCTCTGGGGACATGGTGGCAAAGAGTTACAGATGCCAGCGCTCTaGTGCTATGGGTCCTGGTCCCGGTGTGCTAATGCTGGTGAATCT +
Preference number: 5 (lower is better)
Translates to: LLWGHGGKELQMPAL*CYGSWSRCANAGES
Trigger: AGATTCACCAGCATTAGCACACCGGGACCAGGACCCATAGCACCAGAGCGCTGGCATCTGTAACTCTTTGCCACCATGTCCCCAGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573857.5
CDS-3UTR CAA 90 bp CTGAGGCTGGTGACCGGCCATGGGCAGTGCAGTCACTTGCCTGTTTCGCCAGCATTGCCAATGTCACTGTaGCCTCCCATCTTACAAAGG +
Preference number: 5 (lower is better)
Translates to: LRLVTGHGQCSHLPVSPALPMSL*PPILQR
Trigger: CCTTTGTAAGATGGGAGGCAACAGTGACATTGGCAA...TGCTGGCGAAACAGGCAAGTGACTGCACTGCCCATGGCCGGTCACCAGCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp CGTGCAGGCCACATTCAGCCAGTGGCAGCCATCAGAGGCCCCAGAGTTAGGGCAAAGAGCCCCAAGATCTaGTGGCCATTCTGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: RAGHIQPVAAIRGPRVRAKSPKI*WPFCFP
Trigger: AGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTT...TGCCCTAACTCTGGGGCCTCTGATGGCTGCCACTGGCTGAATGTGGCCTGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp CCACTGCATTGCAGCCATCCCCTCGGTTGCACAGACATTCCCTTTCTCGCACTTTCTGCCGAGATGGGATaGGTGGGCAGGACGTTTGTC +
Preference number: 5 (lower is better)
Translates to: PLHCSHPLGCTDIPFLALSAEMG*VGRTFV
Trigger: GACAAACGTCCTGCCCACCAATCCCATCTCGGCAGA...AAGTGCGAGAAAGGGAATGTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CAA 90 bp CAGCCATCCCCTCGGTTGCACAGACATTCCCTTTCTCGCACTTTGATGCTGGAAGGCCCCTGGAGGCAGTaGGGCTGCATGAATGGATGT +
Preference number: 5 (lower is better)
Translates to: QPSPRLHRHSLSRTLMLEGPWRQ*GCMNGC
Trigger: ACATCCATTCATGCAGCCCAACTGCCTCCAGGGGCC...TTCCAGCATCAAAGTGCGAGAAAGGGAATGTCTGTGCAACCGAGGGGATGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CAA 90 bp CCGGAAAGAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCGGGGTGGTTTTCCCAGGCAGCTTTaGCAGTGGCCGGAAGTGGTG +
Preference number: 5 (lower is better)
Translates to: PERNQLLPQGEAAHHRGGFPRQL*QWPEVV
Trigger: CACCACTTCCGGCCACTGCAAAAGCTGCCTGGGAAA...ACCACCCCGATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CAA 90 bp CAGTCACTGCCTTCCCGCCTAGCAGAGATGACGGCCAGTTCCCTAAAGGTAAAGGATGCCTGGGATCTCTaGGAACAGGGCTGTGCTCAC +
Preference number: 5 (lower is better)
Translates to: QSLPSRLAEMTASSLKVKDAWDL*EQGCAH
Trigger: GTGAGCACAGCCCTGTTCCAAGAGATCCCAGGCATC...CTTTACCTTTAGGGAACTGGCCGTCATCTCTGCTAGGCGGGAAGGCAGTGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS CCA 90 bp ATTCCTGCCAGCCTGCACCTCTGCCACAGTTCAGCTCTGCCGAGATaGGATTGGTGGGCAGGACGTTTGTCAGGGGAAACATCTAATGCT +
Preference number: 5 (lower is better)
Translates to: IPASLHLCHSSALPR*DWWAGRLSGETSNA
Trigger: AGCATTAGATGTTTCCCCTGACAAACGTCCTGCCCACCAATCCCATCTCGGCAGAGCTGAACTGTGGCAGAGGTGCAGGCTGGCAGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000572980.5
ENST00000575135.5
CDS-3UTR CAA 90 bp GGACAGGGCTGTCAAGGGGTAGACAAGCCATTAGCACTCTATGCCTGTCGTCTTCAGCCCACAAAGCTCTaGCTGAACCAGTCGCAGCTC +
Preference number: 5 (lower is better)
Translates to: GQGCQGVDKPLALYACRLQPTKL*LNQSQL
Trigger: GAGCTGCGACTGGTTCAGCAAGAGCTTTGTGGGCTG...AAGACGACAGGCATAGAGTGCTAATGGCTTGTCTACCCCTTGACAGCCCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000573360.5
ENST00000649981.1
CDS-3UTR CAA 90 bp ACAGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGATACAGGTTTGCAGCTaGGAGAGAGATCCCAGCAAC +
Preference number: 5 (lower is better)
Translates to: TGFFPDLDFPVPQGDTVVIQVCS*ERDPSN
Trigger: GTTGCTGGGATCTCTCTCCAAGCTGCAAACCTGTAT...CACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp GCGTGGGGCTGCCAGGCGAGCAAGATCTTGCTCTCATGGATGAGGAAACGATCGTGTAGCCATACAGGTTaGCAGCTTGGAGAGAGATCC +
Preference number: 5 (lower is better)
Translates to: AWGCQASKILLSWMRKRSCSHTG*QLGERS
Trigger: GGATCTCTCTCCAAGCTGCAAACCTGTATGGCTACA...CGATCGTTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTGGCAGCCCCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456096.6
ENST00000575135.5
CDS-3UTR CAA 90 bp GTTGAGCCAGACCAAACCCACGTGCAGGCCACATTCAGCCAGTGGCAGCCATCACTGTGGTCTCTGAGTTaGTGGCTGGGTTTTACTTGC +
Preference number: 5 (lower is better)
Translates to: VEPDQTHVQATFSQWQPSLWSLS*WLGFTC
Trigger: GCAAGTAAAACCCAGCCACAAACTCAGAGACCACAG...TGATGGCTGCCACTGGCTGAATGTGGCCTGCACGTGGGTTTGGTCTGGCTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp AGTGAAGCGGGCTCAAGATCTTCCCATTGTCACCAGCACGGAAAGAGCCCCAAGAGGCAGGCAGATCACTaGAGGCTGGTCAGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: SEAGSRSSHCHQHGKSPKRQADH*RLVRSS
Trigger: TGAACTCCTGACCAGCCTCAAGTGATCTGCCTGCCT...CTTGGGGCTCTTTCCGTGCTGGTGACAATGGGAAGATCTTGAGCCCGCTTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp CAGGGCATCACAGACACAGGTCTTTTTATGGAACTAGCCAGAGGATTCCACCCCTTGACCCCTAGCCCCTaGTGTCCTGTCCACCTGGCT +
Preference number: 5 (lower is better)
Translates to: QGITDTGLFMELARGFHPLTPSP*CPVHLA
Trigger: AGCCAGGTGGACAGGACACAAGGGGCTAGGGGTCAA...GGGGTGGAATCCTCTGGCTAGTTCCATAAAAAGACCTGTGTCTGTGATGCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp AAACCTCTAAGGCTTTATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGGGCCCCTGGAGGCAGTaGGGCTGCATGAATGGATGT +
Preference number: 5 (lower is better)
Translates to: KPLRLYDRRSTALQPSPRGPWRQ*GCMNGC
Trigger: ACATCCATTCATGCAGCCCAACTGCCTCCAGGGGCC...CCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAAGCCTTAGAGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CAA 90 bp TATTTCTGCTTTCCCAGGCAGCTTTTGCAGTGGCCGGAAGTGGTGATGAGAGCTCGCAGATCCACTGCATaGCAGCCATCCCCTCGGTTG +
Preference number: 5 (lower is better)
Translates to: YFCFPRQLLQWPEVVMRARRSTA*QPSPRL
Trigger: CAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCG...AGCTCTCATCACCACTTCCGGCCACTGCAAAAGCTGCCTGGGAAAGCAGAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CAA 90 bp CTGCCAGGCGAGCAAGATCTTGCTCTCATGGATGAGGAAACGATCGGAAGGCTGTGGTGGGCAGGACGTTaGTCAGGGGAAACATCTTCC +
Preference number: 5 (lower is better)
Translates to: LPGEQDLALMDEETIGRLWWAGR*SGETSS
Trigger: GGAAGATGTTTCCCCTGACAAACGTCCTGCCCACCA...CAGCCTTCCGATCGTTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR CAA 90 bp ATTCAGCCAGTGGCAGCCATCAGAGGCCCCAGAGTTAGGGCAGAGGTGTCAGTGTTGCCAATGTCACTGTaGCCTCCCATCTTACAAAGG +
Preference number: 5 (lower is better)
Translates to: IQPVAAIRGPRVRAEVSVLPMSL*PPILQR
Trigger: CCTTTGTAAGATGGGAGGCAACAGTGACATTGGCAA...CACTGACACCTCTGCCCTAACTCTGGGGCCTCTGATGGCTGCCACTGGCTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp CAGTTGGGCTGCATGAATGGATGTGATTGGGGACAGGAGCTTGCAGCAGCCCAGAAACTGGCTGTGACCTaGCCAATGTCACTGTTGCCT +
Preference number: 5 (lower is better)
Translates to: QLGCMNGCDWGQELAAAQKLAVT*PMSLLP
Trigger: AGGCAACAGTGACATTGGCAAGGTCACAGCCAGTTT...CTGGGCTGCTGCAAGCTCCTGTCCCCAATCACATCCATTCATGCAGCCCAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456096.6
ENST00000575135.5
CDS-3UTR CAA 90 bp TTTGTTGAGCCAGACCAAACCCACGTGCAGGCCACATTCAGCCAGTGGCAGCCACTCAAGATCTTCCCATaGTCACCAGCACGGAAAGAG +
Preference number: 5 (lower is better)
Translates to: FVEPDQTHVQATFSQWQPLKIFP*SPARKE
Trigger: CTCTTTCCGTGCTGGTGACAATGGGAAGATCTTGAG...TGGCTGCCACTGGCTGAATGTGGCCTGCACGTGGGTTTGGTCTGGCTCAACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp GATGCTGGAATCACTGGTCTTTTCACCTTCGTAGGAGGTGTCACTCCAGGATGTCGCAGATCCACTGCATaGCAGCCATCCCCTCGGTTG +
Preference number: 5 (lower is better)
Translates to: DAGITGLFTFVGGVTPGCRRSTA*QPSPRL
Trigger: CAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCG...ACATCCTGGAGTGACACCTCCTACGAAGGTGAAAAGACCAGTGATTCCAGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS CCA 90 bp TGGAAAAAGGTGGCCAAGGGGTGTTTGTGTCTGCTACCTGGCTCTTaGGAACTTCAGTTTCCTCATCTGCTTCATCACCCTCCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: WKKVAKGCLCLLPGS*ELQFPHLLHHPPRS
Trigger: GCTCCTGGGAGGGTGATGAAGCAGATGAGGAAACTGAAGTTCCCAAGAGCCAGGTAGCAGACACAAACACCCCTTGGCCACCTTTTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572980.5
CDS-3UTR CAA 90 bp CCATCTATAGATGGTCCGAGGAAGGCCGCAGCCACTGGTTATGAGCAAGATGGGAAACTGGCTGTGACCTaGCCAATGTCACTGTTGCCT +
Preference number: 5 (lower is better)
Translates to: PSIDGPRKAAATGYEQDGKLAVT*PMSLLP
Trigger: AGGCAACAGTGACATTGGCAAGGTCACAGCCAGTTT...CCCATCTTGCTCATAACCAGTGGCTGCGGCCTTCCTCGGACCATCTATAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp AGTGAAGCGGGCTCAAGATCTTCCCATTGTCACCAGCACGGAAAGAGCCCCAAGCTGTGGTCTCTGAGTTaGTGGCTGGGTTTTACTTGC +
Preference number: 5 (lower is better)
Translates to: SEAGSRSSHCHQHGKSPKLWSLS*WLGFTC
Trigger: GCAAGTAAAACCCAGCCACAAACTCAGAGACCACAG...CTTGGGGCTCTTTCCGTGCTGGTGACAATGGGAAGATCTTGAGCCCGCTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp CGTGCAGGCCACATTCAGCCAGTGGCAGCCATCAGAGGCCCCAGAGTTAGGGCAAAAATAAAAACTTTGTaGAGCCAGACCAAACCCACG +
Preference number: 5 (lower is better)
Translates to: RAGHIQPVAAIRGPRVRAKIKTL*SQTKPT
Trigger: CGTGGGTTTGGTCTGGCTCAACAAAGTTTTTATTTT...TGCCCTAACTCTGGGGCCTCTGATGGCTGCCACTGGCTGAATGTGGCCTGCACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp GTCCGGAAAGAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCGGGGTGCAGGCGAGCAAGATCTaGCTCTCATGGATGAGGAAA +
Preference number: 5 (lower is better)
Translates to: VRKEINFCRKVKLPIIGVQASKI*LSWMRK
Trigger: TTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTG...CACCCCGATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTTCCGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CAA 90 bp GGATGTCCGGAAAGAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCGGTGCGTGTTCCTGATCTaGGCTTTCCTAAAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: GCPERNQLLPQGEAAHHRCVFLI*AFLKAS
Trigger: GCTGGCCTTTAGGAAAGCCAAGATCAGGAACACGCA...CCGATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTTCCGGACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR CAA 90 bp CCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAAGTTGAGGAAGACTCCAAATATCACTaGCCCTCTTCGAAACACGGT +
Preference number: 5 (lower is better)
Translates to: PRLGLPCPTGRHSSEVEEDSKYH*PSSKHG
Trigger: ACCGTGTTTCGAAGAGGGCAAGTGATATTTGGAGTC...TTCCTCAACTTCACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573360.5
CDS-3UTR CAA 90 bp GCCCACAAAGCTCTTGCTGAACCAGTCGCAGCTCACGTAGGTGACGATGGCACTGACTCCAAATATCACTaGCCCTCTTCGAAACACGGT +
Preference number: 5 (lower is better)
Translates to: AHKALAEPVAAHVGDDGTDSKYH*PSSKHG
Trigger: ACCGTGTTTCGAAGAGGGCAAGTGATATTTGGAGTC...AGTGCCATCGTCACCTACGTGAGCTGCGACTGGTTCAGCAAGAGCTTTGTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
CDS-3UTR CAA 90 bp AAGAGAACCTCATCAGTTCCTAATGCTGGTGAATCTCCAGCCCCTCGAGGCCAGTTACCACTTCAGACTTaGCTGGGGGTGTTAGCGTGG +
Preference number: 5 (lower is better)
Translates to: KRTSSVPNAGESPAPRGQLPLQT*LGVLAW
Trigger: CCACGCTAACACCCCCAGCAAAGTCTGAAGTGGTAA...CTGGCCTCGAGGGGCTGGAGATTCACCAGCATTAGGAACTGATGAGGTTCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
CDS-3UTR CAA 90 bp TGCTGGAATCACTGGTCTTTTCACCTTCGTAGGAGGTGTCACTCCAGGATGTCCAAGGGGTGTCTGATCTaGGCTTTCCTAAAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: CWNHWSFHLRRRCHSRMSKGCLI*AFLKAS
Trigger: GCTGGCCTTTAGGAAAGCCAAGATCAGACACCCCTT...GGACATCCTGGAGTGACACCTCCTACGAAGGTGAAAAGACCAGTGATTCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575135.5
CDS-3UTR CAA 90 bp CCTCTAAGGCTTTATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGATACAGGTTTGCAGCTaGGAGAGAGATCCCAGCAAC +
Preference number: 5 (lower is better)
Translates to: PLRLYDRRSTALQPSPRLIQVCS*ERDPSN
Trigger: GTTGCTGGGATCTCTCTCCAAGCTGCAAACCTGTAT...CAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAAGCCTTAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456096.6
ENST00000575135.5
CDS-3UTR CAA 90 bp GTGGCAGCCATCAGAGGCCCCAGAGTTAGGGCAGAGGTGTCAGTGTTTGTTAAATGTAGCCATACAGGTTaGCAGCTTGGAGAGAGATCC +
Preference number: 5 (lower is better)
Translates to: VAAIRGPRVRAEVSVFVKCSHTG*QLGERS
Trigger: GGATCTCTCTCCAAGCTGCAAACCTGTATGGCTACA...TTTAACAAACACTGACACCTCTGCCCTAACTCTGGGGCCTCTGATGGCTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp CTGCCAGGCGAGCAAGATCTTGCTCTCATGGATGAGGAAACGATCGGAAGGCTGTTGCCAATGTCACTGTaGCCTCCCATCTTACAAAGG +
Preference number: 5 (lower is better)
Translates to: LPGEQDLALMDEETIGRLLPMSL*PPILQR
Trigger: CCTTTGTAAGATGGGAGGCAACAGTGACATTGGCAA...CAGCCTTCCGATCGTTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456096.6
ENST00000575135.5
CDS-3UTR CAA 90 bp CTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCTTGACCCCTAGCCCCTaGTGTCCTGTCCACCTGGCT +
Preference number: 5 (lower is better)
Translates to: LWRGHFLLWLKCELALCSLTPSP*CPVHLA
Trigger: AGCCAGGTGGACAGGACACAAGGGGCTAGGGGTCAA...GGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp CTACTTTGTTCTTCATTACGAGTGAAGCGGGCTCAAGATCTTCCCATTGTCACCTTGACCCCTAGCCCCTaGTGTCCTGTCCACCTGGCT +
Preference number: 5 (lower is better)
Translates to: LLCSSLRVKRAQDLPIVTLTPSP*CPVHLA
Trigger: AGCCAGGTGGACAGGACACAAGGGGCTAGGGGTCAA...GGTGACAATGGGAAGATCTTGAGCCCGCTTCACTCGTAATGAAGAACAAAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp CTACTTTGTTCTTCATTACGAGTGAAGCGGGCTCAAGATCTTCCCATTGTCACCGGGCAGTGCAGTCACTaGCCTGTTTCGCCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: LLCSSLRVKRAQDLPIVTGQCSH*PVSPAA
Trigger: AGCTGCTGGCGAAACAGGCAAGTGACTGCACTGCCC...GGTGACAATGGGAAGATCTTGAGCCCGCTTCACTCGTAATGAAGAACAAAGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp CCACTGGTTATGAGCAAGATGGGTAGTGTGAGGTATTCCGGTCACTTTCAAAGAGGCTTCTTCCCCGACTaGGACTTCCCTGTCCCACAG +
Preference number: 5 (lower is better)
Translates to: PLVMSKMGSVRYSGHFQRGFFPD*DFPVPQ
Trigger: CTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCC...TCTTTGAAAGTGACCGGAATACCTCACACTACCCATCTTGCTCATAACCAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp CCTCTAAGGCTTTATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGTGGTGGGCAGGACGTTaGTCAGGGGAAACATCTAAT +
Preference number: 5 (lower is better)
Translates to: PLRLYDRRSTALQPSPRLWWAGR*SGETSN
Trigger: ATTAGATGTTTCCCCTGACAAACGTCCTGCCCACCA...CAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATAAAGCCTTAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456096.6
ENST00000575135.5
CDS-3UTR CAA 90 bp ACCCTATCAGGGCAGAAACCTCTAAGGCTTTATGATCGCAGATCCACTGCATTGTCTGCCGAGATGGGATaGGTGGGCAGGACGTTTGTC +
Preference number: 5 (lower is better)
Translates to: TLSGQKPLRLYDRRSTALSAEMG*VGRTFV
Trigger: GACAAACGTCCTGCCCACCAATCCCATCTCGGCAGA...CAATGCAGTGGATCTGCGATCATAAAGCCTTAGAGGTTTCTGCCCTGATAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CAA 90 bp TATGATCGCAGATCCACTGCATTGCAGCCATCCCCTCGGTTGCACAGACATTCCCAGGCGAGCAAGATCTaGCTCTCATGGATGAGGAAA +
Preference number: 5 (lower is better)
Translates to: YDRRSTALQPSPRLHRHSQASKI*LSWMRK
Trigger: TTTCCTCATCCATGAGAGCAAGATCTTGCTCGCCTG...GGAATGTCTGTGCAACCGAGGGGATGGCTGCAATGCAGTGGATCTGCGATCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CAA 90 bp GATGAGGAAACGATCGGAAGGCTGCTCTGCAAACTATTTCTGCTTTCCCAGGCACAGCCATCCCCTCGGTaGCACAGACATTCCCTTTCT +
Preference number: 5 (lower is better)
Translates to: DEETIGRLLCKLFLLSQAQPSPR*HRHSLS
Trigger: AGAAAGGGAATGTCTGTGCAACCGAGGGGATGGCTG...TGCCTGGGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGATCGTTTCCTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CAA 90 bp GTCCGGAAAGAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCGGGGTGGTACTTTCCCGCCACTaGACTCCAAATATCACTTGC +
Preference number: 5 (lower is better)
Translates to: VRKEINFCRKVKLPIIGVVLSRH*TPNITC
Trigger: GCAAGTGATATTTGGAGTCAAGTGGCGGGAAAGTAC...CACCCCGATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTTCCGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR CAA 90 bp TATTTCTGCTTTCCCAGGCAGCTTTTGCAGTGGCCGGAAGTGGTGATGAGAGCTTTACCACTTCAGACTTaGCTGGGGGTGTTAGCGTGG +
Preference number: 5 (lower is better)
Translates to: YFCFPRQLLQWPEVVMRALPLQT*LGVLAW
Trigger: CCACGCTAACACCCCCAGCAAAGTCTGAAGTGGTAA...AGCTCTCATCACCACTTCCGGCCACTGCAAAAGCTGCCTGGGAAAGCAGAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR CAA 90 bp ACCAGCACGGAAAGAGCCCCAAGATCTTGTGGCCATTCTGTTTTCCTCTTGGACATACAGGTTTGCAGCTaGGAGAGAGATCCCAGCAAC +
Preference number: 5 (lower is better)
Translates to: TSTERAPRSCGHSVFLLDIQVCS*ERDPSN
Trigger: GTTGCTGGGATCTCTCTCCAAGCTGCAAACCTGTAT...GTCCAAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTTTCCGTGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp GGATGTCCGGAAAGAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCGGTTGCCAATGTCACTGTaGCCTCCCATCTTACAAAGG +
Preference number: 5 (lower is better)
Translates to: GCPERNQLLPQGEAAHHRLPMSL*PPILQR
Trigger: CCTTTGTAAGATGGGAGGCAACAGTGACATTGGCAA...CCGATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTTCCGGACATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456096.6
ENST00000575135.5
CDS-3UTR CAA 90 bp ACAGGCTTCTTCCCCGACTTGGACTTCCCTGTCCCACAGGGCGACACAGTAGTGAAAATAAAAACTTTGTaGAGCCAGACCAAACCCACG +
Preference number: 5 (lower is better)
Translates to: TGFFPDLDFPVPQGDTVVKIKTL*SQTKPT
Trigger: CGTGGGTTTGGTCTGGCTCAACAAAGTTTTTATTTT...CACTACTGTGTCGCCCTGTGGGACAGGGAAGTCCAAGTCGGGGAAGAAGCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp TATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCCTGGAATCCCAGCACTTaGGGTGAAGGAGGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: YGEDISCYGSSANWPYVPWNPST*GEGGRQ
Trigger: CTGCCTGCCTCCTTCACCCAAAGTGCTGGGATTCCA...GGGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp CCACTGGTTATGAGCAAGATGGGTAGTGTGAGGTATTCCGGTCACTTTCAAAGATGGAATCCCAGCACTTaGGGTGAAGGAGGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: PLVMSKMGSVRYSGHFQRWNPST*GEGGRQ
Trigger: CTGCCTGCCTCCTTCACCCAAAGTGCTGGGATTCCA...TCTTTGAAAGTGACCGGAATACCTCACACTACCCATCTTGCTCATAACCAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp ACCAGCACGGAAAGAGCCCCAAGATCTTGTGGCCATTCTGTTTTCCTCTTGGACCTCAAGATCTTCCCATaGTCACCAGCACGGAAAGAG +
Preference number: 5 (lower is better)
Translates to: TSTERAPRSCGHSVFLLDLKIFP*SPARKE
Trigger: CTCTTTCCGTGCTGGTGACAATGGGAAGATCTTGAG...GTCCAAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTTTCCGTGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp GCACGGAAAGAGCCCCAAGATCTTGTGGCCATTCTGTTTTCCTCTTGGACTGAATGGCTCAAGTGCGAATaGGCCTTATGTTCCCTGCCT +
Preference number: 5 (lower is better)
Translates to: ARKEPQDLVAILFSSWTEWLKCE*ALCSLP
Trigger: AGGCAGGGAACATAAGGCCAATTCGCACTTGAGCCA...TTCAGTCCAAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTTTCCGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp CCTTTCTCGCACTTTGATGCTGGAATCACTGGTCTTTTCACCTTCGTAGGAGGTACCCGGTCTCTGATCTaGGCTTTCCTAAAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: PFSHFDAGITGLFTFVGGTRSLI*AFLKAS
Trigger: GCTGGCCTTTAGGAAAGCCAAGATCAGAGACCGGGT...ACCTCCTACGAAGGTGAAAAGACCAGTGATTCCAGCATCAAAGTGCGAGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456096.6
CDS-3UTR CAA 90 bp TCGGAAGGCTGCTCTGCAAACTATTTCTGCTTTCCCAGGCAGCTTTTGCAGTGGTCCCTTTCTCGCACTTaGATGCTGGAATCACTGGTC +
Preference number: 5 (lower is better)
Translates to: SEGCSANYFCFPRQLLQWSLSRT*MLESLV
Trigger: GACCAGTGATTCCAGCATCAAAGTGCGAGAAAGGGA...CCACTGCAAAAGCTGCCTGGGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CAA 90 bp TCATGGATGAGGAAACGATCGGAAGGCTGCTCTGCAAACTATTTCTGCTTTCCCCAGCCATCCCCTCGGTaGCACAGACATTCCCTTTCT +
Preference number: 5 (lower is better)
Translates to: SWMRKRSEGCSANYFCFPQPSPR*HRHSLS
Trigger: AGAAAGGGAATGTCTGTGCAACCGAGGGGATGGCTG...GGGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGATCGTTTCCTCATCCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CAA 90 bp GTCCGGAAAGAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCATCATCGGGGTGAGGATGTCCAGGTTCTaGGTGTCTAGAAGAATGATG +
Preference number: 5 (lower is better)
Translates to: VRKEINFCRKVKLPIIGVRMSRF*VSRRMM
Trigger: CATCATTCTTCTAGACACCAAGAACCTGGACATCCT...CACCCCGATGATGGGCAGCTTCACCTTGCGGCAGAAGTTGATTTCTTTCCGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR CAA 90 bp ACAAATGGGTTGTGGGATCGTGGGATTCTGCTGTGTCGGAAGCTTAGTCGATTGATACAGGTTTGCAGCTaGGAGAGAGATCCCAGCAAC +
Preference number: 5 (lower is better)
Translates to: TNGLWDRGILLCRKLSRLIQVCS*ERDPSN
Trigger: GTTGCTGGGATCTCTCTCCAAGCTGCAAACCTGTAT...CAATCGACTAAGCTTCCGACACAGCAGAATCCCACGATCCCACAACCCATTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572428.5
ENST00000619408.1
CDS-3UTR CAA 90 bp TGTGGGATCGTGGGATTCTGCTGTGTCGGAAGCTTAGTCGATTGTAGAAACTCCTGTAGCCATACAGGTTaGCAGCTTGGAGAGAGATCC +
Preference number: 5 (lower is better)
Translates to: CGIVGFCCVGSLVDCRNSCSHTG*QLGERS
Trigger: GGATCTCTCTCCAAGCTGCAAACCTGTATGGCTACA...GGAGTTTCTACAATCGACTAAGCTTCCGACACAGCAGAATCCCACGATCCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572428.5
ENST00000619408.1
CDS-3UTR CAA 90 bp TGTGGGATCGTGGGATTCTGCTGTGTCGGAAGCTTAGTCGATTGTAGAAACTCCAAACTGGCTGTGACCTaGCCAATGTCACTGTTGCCT +
Preference number: 5 (lower is better)
Translates to: CGIVGFCCVGSLVDCRNSKLAVT*PMSLLP
Trigger: AGGCAACAGTGACATTGGCAAGGTCACAGCCAGTTT...GGAGTTTCTACAATCGACTAAGCTTCCGACACAGCAGAATCCCACGATCCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572428.5
ENST00000619408.1
CDS-3UTR CAA 90 bp GCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCCTGTGGTCTCTGAGTTaGTGGCTGGGTTTTACTTGC +
Preference number: 5 (lower is better)
Translates to: AYVLWRGHFLLWLKCELALWSLS*WLGFTC
Trigger: GCAAGTAAAACCCAGCCACAAACTCAGAGACCACAG...GGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp CAGGGCATCACAGACACAGGTCTTTTTATGGAACTAGCCAGAGGATTCCACCCCCAGAGGTGTCAGTGTTaGTTAAAGCTGTGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: QGITDTGLFMELARGFHPQRCQC*LKLWSL
Trigger: CAGAGACCACAGCTTTAACAAACACTGACACCTCTG...GGGGTGGAATCCTCTGGCTAGTTCCATAAAAAGACCTGTGTCTGTGATGCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp TATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCCAGGCAGGCAGATCACTaGAGGCTGGTCAGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: YGEDISCYGSSANWPYVPRQADH*RLVRSS
Trigger: TGAACTCCTGACCAGCCTCAAGTGATCTGCCTGCCT...GGGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp AGCAAGATGGGTAGTGTGAGGTATTCCGGTCACTTTCAAAGACTCAGGGCATCATGGCTCAAGTGCGAATaGGCCTTATGTTCCCTGCCT +
Preference number: 5 (lower is better)
Translates to: SKMGSVRYSGHFQRLRASWLKCE*ALCSLP
Trigger: AGGCAGGGAACATAAGGCCAATTCGCACTTGAGCCA...TGATGCCCTGAGTCTTTGAAAGTGACCGGAATACCTCACACTACCCATCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp GTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTATGGAACTAGCTTTCCCAGGCAGCTTTaGCAGTGGCCGGAAGTGGTG +
Preference number: 5 (lower is better)
Translates to: VTFKDSGHHRHRSFYGTSFPRQL*QWPEVV
Trigger: CACCACTTCCGGCCACTGCAAAAGCTGCCTGGGAAA...GCTAGTTCCATAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649981.1
CDS-3UTR CAA 90 bp GATCGGAAGGCTGCTCTGCAAACTATTTCTGCTTTCCCAGGCAGCTTTTGCAGTTCCCTTTCTCGCACTTaGATGCTGGAATCACTGGTC +
Preference number: 5 (lower is better)
Translates to: DRKAALQTISAFPGSFCSSLSRT*MLESLV
Trigger: GACCAGTGATTCCAGCATCAAAGTGCGAGAAAGGGA...ACTGCAAAAGCTGCCTGGGAAAGCAGAAATAGTTTGCAGAGCAGCCTTCCGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS TCA 90 bp ATAAGAAAGCCGTCTGGAACACTGTCTGGGACAGGAAACTGGCTGTaGCCTTGCCAATGTCACTGTTGCCTCCCATCTTACAAAGGATGT +
Preference number: 5 (lower is better)
Translates to: IRKPSGTLSGTGNWL*PCQCHCCLPSYKGC
Trigger: ACATCCTTTGTAAGATGGGAGGCAACAGTGACATTGGCAAGGTCACAGCCAGTTTCCTGTCCCAGACAGTGTTCCAGACGGCTTTCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619408.1
CDS-3UTR CAA 90 bp CCACTGGTTATGAGCAAGATGGGTAGTGTGAGGTATTCCGGTCACTTTCAAAGAAAGGGGTGTCTGATCTaGGCTTTCCTAAAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: PLVMSKMGSVRYSGHFQRKGCLI*AFLKAS
Trigger: GCTGGCCTTTAGGAAAGCCAAGATCAGACACCCCTT...TCTTTGAAAGTGACCGGAATACCTCACACTACCCATCTTGCTCATAACCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299866.13
CDS-3UTR CAA 90 bp CCTTTCTCGCACTTTGATGCTGGAATCACTGGTCTTTTCACCTTCGTAGGAGGTATACAGGTTTGCAGCTaGGAGAGAGATCCCAGCAAC +
Preference number: 5 (lower is better)
Translates to: PFSHFDAGITGLFTFVGGIQVCS*ERDPSN
Trigger: GTTGCTGGGATCTCTCTCCAAGCTGCAAACCTGTAT...ACCTCCTACGAAGGTGAAAAGACCAGTGATTCCAGCATCAAAGTGCGAGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456096.6
ENST00000575135.5
CDS-3UTR CAA 90 bp CCTTTCTCGCACTTTGATGCTGGAATCACTGGTCTTTTCACCTTCGTAGGAGGTTGTAGCCATACAGGTTaGCAGCTTGGAGAGAGATCC +
Preference number: 5 (lower is better)
Translates to: PFSHFDAGITGLFTFVGGCSHTG*QLGERS
Trigger: GGATCTCTCTCCAAGCTGCAAACCTGTATGGCTACA...ACCTCCTACGAAGGTGAAAAGACCAGTGATTCCAGCATCAAAGTGCGAGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456096.6
ENST00000575135.5
CDS-3UTR CAA 90 bp ACAAATGGGTTGTGGGATCGTGGGATTCTGCTGTGTCGGAAGCTTAGTCGATTGTTGCCAATGTCACTGTaGCCTCCCATCTTACAAAGG +
Preference number: 5 (lower is better)
Translates to: TNGLWDRGILLCRKLSRLLPMSL*PPILQR
Trigger: CCTTTGTAAGATGGGAGGCAACAGTGACATTGGCAA...CAATCGACTAAGCTTCCGACACAGCAGAATCCCACGATCCCACAACCCATTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572428.5
ENST00000619408.1
CDS-3UTR CAA 90 bp CCTTTCTCGCACTTTGATGCTGGAATCACTGGTCTTTTCACCTTCGTAGGAGGTAAACTGGCTGTGACCTaGCCAATGTCACTGTTGCCT +
Preference number: 5 (lower is better)
Translates to: PFSHFDAGITGLFTFVGGKLAVT*PMSLLP
Trigger: AGGCAACAGTGACATTGGCAAGGTCACAGCCAGTTT...ACCTCCTACGAAGGTGAAAAGACCAGTGATTCCAGCATCAAAGTGCGAGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456096.6
ENST00000575135.5
CDS-3UTR CAA 90 bp GGCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCAAGAGCCCCAAGATCTaGTGGCCATTCTGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: GIRPMERTFPVMAQVRIGKSPKI*WPFCFP
Trigger: AGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTT...GCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp CTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCTGGCTCAAGTGCGAATaGGCCTTATGTTCCCTGCCT +
Preference number: 5 (lower is better)
Translates to: LWRGHFLLWLKCELALCSWLKCE*ALCSLP
Trigger: AGGCAGGGAACATAAGGCCAATTCGCACTTGAGCCA...GGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp CAAACCCTATCAGGGCAGAAACCTCTAAGGCTTTATGATCGCAGATCCACTGCATCCCTTTCTCGCACTTaGATGCTGGAATCACTGGTC +
Preference number: 5 (lower is better)
Translates to: QTLSGQKPLRLYDRRSTASLSRT*MLESLV
Trigger: GACCAGTGATTCCAGCATCAAAGTGCGAGAAAGGGA...TGCAGTGGATCTGCGATCATAAAGCCTTAGAGGTTTCTGCCCTGATAGGGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000575135.5
ENST00000649981.1
CDS-3UTR CAA 90 bp GCACGGAAAGAGCCCCAAGATCTTGTGGCCATTCTGTTTTCCTCTTGGACTGAAGTACTTTCCCGCCACTaGACTCCAAATATCACTTGC +
Preference number: 5 (lower is better)
Translates to: ARKEPQDLVAILFSSWTEVLSRH*TPNITC
Trigger: GCAAGTGATATTTGGAGTCAAGTGGCGGGAAAGTAC...TTCAGTCCAAGAGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTTTCCGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573360.5
CDS-3UTR CAA 90 bp CTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCTGTAGCCATACAGGTTaGCAGCTTGGAGAGAGATCC +
Preference number: 5 (lower is better)
Translates to: LWRGHFLLWLKCELALCSCSHTG*QLGERS
Trigger: GGATCTCTCTCCAAGCTGCAAACCTGTATGGCTACA...GGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp AGCAGGCAGAATGTGTGTGTCATGTGCTCCCATTCGTATTTTAGGTATATGAGAAGGCAGGCAGATCACTaGAGGCTGGTCAGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: SRQNVCVMCSHSYFRYMRRQADH*RLVRSS
Trigger: TGAACTCCTGACCAGCCTCAAGTGATCTGCCTGCCT...TCTCATATACCTAAAATACGAATGGGAGCACATGACACACACATTCTGCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp TGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTGGCCTTATGTTCCCTGAAGAGCCCCAAGATCTaGTGGCCATTCTGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: WRGHFLLWLKCELALCSLKSPKI*WPFCFP
Trigger: AGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTT...CAGGGAACATAAGGCCAATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp TTCTGCTGTGTCGGAAGCTTAGTCGATTGTAGAAACTCCCGTTTAAGCCATTTCATACAGGTTTGCAGCTaGGAGAGAGATCCCAGCAAC +
Preference number: 5 (lower is better)
Translates to: FCCVGSLVDCRNSRLSHFIQVCS*ERDPSN
Trigger: GTTGCTGGGATCTCTCTCCAAGCTGCAAACCTGTAT...GAAATGGCTTAAACGGGAGTTTCTACAATCGACTAAGCTTCCGACACAGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572428.5
CDS-3UTR CAA 90 bp AAGACTCAGGGCATCACAGACACAGGTCTTTTTATGGAACTAGCCAGAGGATTCTTGCCAATGTCACTGTaGCCTCCCATCTTACAAAGG +
Preference number: 5 (lower is better)
Translates to: KTQGITDTGLFMELARGFLPMSL*PPILQR
Trigger: CCTTTGTAAGATGGGAGGCAACAGTGACATTGGCAA...GAATCCTCTGGCTAGTTCCATAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp CAGTGTTTGTTAAAGCTGTGGTCTCTGAGTTTGTGGCTGGGTTTTACTTGCCTAAAACTGGCTGTGACCTaGCCAATGTCACTGTTGCCT +
Preference number: 5 (lower is better)
Translates to: QCLLKLWSLSLWLGFTCLKLAVT*PMSLLP
Trigger: AGGCAACAGTGACATTGGCAAGGTCACAGCCAGTTT...TAGGCAAGTAAAACCCAGCCACAAACTCAGAGACCACAGCTTTAACAAACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299866.13
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp TACGGCATACGTCCTATGGAGAGGACATTTCCTGTTATGGCTCAAGTGCGAATTCAGAGGTGTCAGTGTTaGTTAAAGCTGTGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: YGIRPMERTFPVMAQVRIQRCQC*LKLWSL
Trigger: CAGAGACCACAGCTTTAACAAACACTGACACCTCTG...AATTCGCACTTGAGCCATAACAGGAAATGTCCTCTCCATAGGACGTATGCCGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp CCACTGGTTATGAGCAAGATGGGTAGTGTGAGGTATTCCGGTCACTTTCAAAGAAAGAGCCCCAAGATCTaGTGGCCATTCTGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: PLVMSKMGSVRYSGHFQRKSPKI*WPFCFP
Trigger: AGGAAAACAGAATGGCCACAAGATCTTGGGGCTCTT...TCTTTGAAAGTGACCGGAATACCTCACACTACCCATCTTGCTCATAACCAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp CCATTAGCACTCTATGCCTGTCGTCTTGTTTTCCAGGAATCCAAGAGTTTTGTATGCGTGTTCCTGATCTaGGCTTTCCTAAAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: PLALYACRLVFQESKSFVCVFLI*AFLKAS
Trigger: GCTGGCCTTTAGGAAAGCCAAGATCAGGAACACGCA...TACAAAACTCTTGGATTCCTGGAAAACAAGACGACAGGCATAGAGTGCTAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573360.5
ENST00000649981.1
CDS-3UTR CAA 90 bp AGGTATTCCGGTCACTTTCAAAGACTCAGGGCATCACAGACACAGGTCTTTTTACAGAGGTGTCAGTGTTaGTTAAAGCTGTGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: RYSGHFQRLRASQTQVFLQRCQC*LKLWSL
Trigger: CAGAGACCACAGCTTTAACAAACACTGACACCTCTG...TAAAAAGACCTGTGTCTGTGATGCCCTGAGTCTTTGAAAGTGACCGGAATACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp TTTGTTAAAGCTGTGGTCTCTGAGTTTGTGGCTGGGTTTTACTTGCCTAGAAGACTCAAGATCTTCCCATaGTCACCAGCACGGAAAGAG +
Preference number: 5 (lower is better)
Translates to: FVKAVVSEFVAGFYLPRRLKIFP*SPARKE
Trigger: CTCTTTCCGTGCTGGTGACAATGGGAAGATCTTGAG...TCTTCTAGGCAAGTAAAACCCAGCCACAAACTCAGAGACCACAGCTTTAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp TTTCTACTTTGTTCTTCATTACGAGTGAAGCGGGCTCAAGATCTTCCCATTGTCCAGAGGTGTCAGTGTTaGTTAAAGCTGTGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: FLLCSSLRVKRAQDLPIVQRCQC*LKLWSL
Trigger: CAGAGACCACAGCTTTAACAAACACTGACACCTCTG...GACAATGGGAAGATCTTGAGCCCGCTTCACTCGTAATGAAGAACAAAGTAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp CCACTGGTTATGAGCAAGATGGGTAGTGTGAGGTATTCCGGTCACTTTCAAAGAAAAATAAAAACTTTGTaGAGCCAGACCAAACCCACG +
Preference number: 5 (lower is better)
Translates to: PLVMSKMGSVRYSGHFQRKIKTL*SQTKPT
Trigger: CGTGGGTTTGGTCTGGCTCAACAAAGTTTTTATTTT...TCTTTGAAAGTGACCGGAATACCTCACACTACCCATCTTGCTCATAACCAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp ACAGAGTTTTTGTGTTTAAATACCCTCTACTTGAGGTACGCCCTATATAAACGATGGCTCAAGTGCGAATaGGCCTTATGTTCCCTGCCT +
Preference number: 5 (lower is better)
Translates to: TEFLCLNTLYLRYALYKRWLKCE*ALCSLP
Trigger: AGGCAGGGAACATAAGGCCAATTCGCACTTGAGCCA...TCGTTTATATAGGGCGTACCTCAAGTAGAGGGTATTTAAACACAAAAACTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS-3UTR CAA 90 bp TTTGTTAAAGCTGTGGTCTCTGAGTTTGTGGCTGGGTTTTACTTGCCTAGAAGAAAAATAAAAACTTTGTaGAGCCAGACCAAACCCACG +
Preference number: 5 (lower is better)
Translates to: FVKAVVSEFVAGFYLPRRKIKTL*SQTKPT
Trigger: CGTGGGTTTGGTCTGGCTCAACAAAGTTTTTATTTT...TCTTCTAGGCAAGTAAAACCCAGCCACAAACTCAGAGACCACAGCTTTAACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000299866.13
ENST00000572102.5
ENST00000572428.5
ENST00000573360.5
CDS GCA 72 bp TGCTACCTGGCTCTTGGGAACTTCAGTTTCCTCATCTaGTTCATCACCCTCCCAGGAGCCCACCTGGCGCCC +
Preference number: 6 (lower is better)
Translates to: CYLALGNFSFLI*FITLPGAHLAP
Trigger: GGGCGCCAGGTGGGCTCCTGGGAGGGTGATGAAGCAGATGAGGAAACTGAAGTTCCCAAGAGCCAGGTAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572980.5
CDS CCA 72 bp GAGTTACAGATGCCAGCGCTCTGGTGCTATGGGTCCTaGTCCCGGTGTGCTAATGCTGGTGAATCTCCAGCC +
Preference number: 6 (lower is better)
Translates to: ELQMPALWCYGS*SRCANAGESPA
Trigger: GGCTGGAGATTCACCAGCATTAGCACACCGGGACCAGGACCCATAGCACCAGAGCGCTGGCATCTGTAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573857.5
CDS GCA 72 bp CATGGTGGCAAAGAGTTACAGATGCCAGCGCTCTGGTaGTATGGGTCCTGGTCCCGGTGTGCTAATGCTGGT +
Preference number: 6 (lower is better)
Translates to: HGGKELQMPALW*YGSWSRCANAG
Trigger: ACCAGCATTAGCACACCGGGACCAGGACCCATAGCACCAGAGCGCTGGCATCTGTAACTCTTTGCCACCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573857.5
CDS CCA 72 bp GGACATGGTGGCAAAGAGTTACAGATGCCAGCGCTCTaGTGCTATGGGTCCTGGTCCCGGTGTGCTAATGCT +
Preference number: 6 (lower is better)
Translates to: GHGGKELQMPAL*CYGSWSRCANA
Trigger: AGCATTAGCACACCGGGACCAGGACCCATAGCACCAGAGCGCTGGCATCTGTAACTCTTTGCCACCATGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573857.5
CDS CAA 72 bp GGTGGCCAAGGGGTGTTTGTGTCTGCTACCTGGCTCTaGGGAACTTCAGTTTCCTCATCTGCTTCATCACCC +
Preference number: 6 (lower is better)
Translates to: GGQGVFVSATWL*GTSVSSSASSP
Trigger: GGGTGATGAAGCAGATGAGGAAACTGAAGTTCCCAAGAGCCAGGTAGCAGACACAAACACCCCTTGGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572980.5
CDS CAA 90 bp AGGAGGATCACTGAGGCTAGGAGTTTTGAGACCCGGTCTCTGATCTaGGCTTTCCTAAAGGCCAGCTCCTCCTCGTTTCCAAAGTCCAGG +
Preference number: 6 (lower is better)
Translates to: RRITEARSFETRSLI*AFLKASSSSFPKSR
Trigger: CCTGGACTTTGGAAACGAGGAGGAGCTGGCCTTTAGGAAAGCCAAGATCAGAGACCGGGTCTCAAAACTCCTAGCCTCAGTGATCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456096.6
ENST00000570692.1
CDS CAA 90 bp GTGGAAAAAGGTGGCCAAGGGGTGTTTGTGTCTGCTACCTGGCTCTaGGGAACTTCAGTTTCCTCATCTGCTTCATCACCCTCCCAGGAG +
Preference number: 6 (lower is better)
Translates to: VEKGGQGVFVSATWL*GTSVSSSASSPSQE
Trigger: CTCCTGGGAGGGTGATGAAGCAGATGAGGAAACTGAAGTTCCCAAGAGCCAGGTAGCAGACACAAACACCCCTTGGCCACCTTTTTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572980.5
CDS CAA 72 bp ACTGAGGCTAGGAGTTTTGAGACCCGGTCTCTGATCTaGGCTTTCCTAAAGGCCAGCTCCTCCTCGTTTCCA +
Preference number: 6 (lower is better)
Translates to: TEARSFETRSLI*AFLKASSSSFP
Trigger: TGGAAACGAGGAGGAGCTGGCCTTTAGGAAAGCCAAGATCAGAGACCGGGTCTCAAAACTCCTAGCCTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456096.6
ENST00000570692.1
CDS CAA 72 bp TCAGCTCTGCCGAGATGGGATTGGTGGGCAGGACGTTaGTCAGGGGAAACATCTAATGCTGGTGAATCTCCA +
Preference number: 6 (lower is better)
Translates to: SALPRWDWWAGR*SGETSNAGESP
Trigger: TGGAGATTCACCAGCATTAGATGTTTCCCCTGACAAACGTCCTGCCCACCAATCCCATCTCGGCAGAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456096.6
ENST00000572980.5
ENST00000575135.5
CDS CAA 72 bp GGTGGCCAAGGGGTGTTTGTGTCTGCTACCTGGCTCTaGGGAACTTCAGTTTCCTCATCTTTAATCCCAGCA +
Preference number: 6 (lower is better)
Translates to: GGQGVFVSATWL*GTSVSSSLIPA
Trigger: TGCTGGGATTAAAGATGAGGAAACTGAAGTTCCCAAGAGCCAGGTAGCAGACACAAACACCCCTTGGCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570692.1
CDS CCA 72 bp GAAAAAGGTGGCCAAGGGGTGTTTGTGTCTGCTACCTaGCTCTTGGGAACTTCAGTTTCCTCATCTTTAATC +
Preference number: 6 (lower is better)
Translates to: EKGGQGVFVSAT*LLGTSVSSSLI
Trigger: GATTAAAGATGAGGAAACTGAAGTTCCCAAGAGCCAGGTAGCAGACACAAACACCCCTTGGCCACCTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570692.1