RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TUT7 (Homo sapiens)

Ensembl gene IDs: ENSG00000083223

Ensembl transcript IDs: ENST00000277141.10, ENST00000375947.1, ENST00000375948.2, ENST00000375957.5, ENST00000375960.6, ENST00000375963.8, ENST00000469004.1

Found 538 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGTTACAGTGAACCAAATGCTTCCCACAGTCTGTCTGTCTGGAGGTaGTATGTAAATTCAAGTATCAATTTAGAAAACTGTACCCAAAGA +
Preference number: 1 (lower is better)
Translates to: SYSEPNASHSLSVWR*YVNSSINLENCTQR
Trigger: TCTTTGGGTACAGTTTTCTAAATTGATACTTGAATTTACATATCACCTCCAGACAGACAGACTGTGGGAAGCATTTGGTTCACTGTAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375948.2
3UTR-3UTR TCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATGAAACCCCAGAGACCTaGGTGGCACTGCCCATCCAC +
Preference number: 2 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDETPET*VALPIH
Trigger: GTGGATGGGCAGTGCCACTCAGGTCTCTGGGGTTTC...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
3UTR-3UTR GCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAGACCTGAGTGGCACTaGCCATCCACTGAAGGCCCA +
Preference number: 2 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDRPEWH*PSTEGP
Trigger: TGGGCCTTCAGTGGATGGGCAGTGCCACTCAGGTCT...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
3UTR-3UTR GCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCAGACCTGAGTGGCACTaGCCATCCACTGAAGGCCCA +
Preference number: 2 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLRPEWH*PSTEGP
Trigger: TGGGCCTTCAGTGGATGGGCAGTGCCACTCAGGTCT...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
3UTR-3UTR TCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATCACTGCTGTGTCCTGTaGAATGAACCTAATTTTCCG +
Preference number: 2 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDHCCVL*NEPNFP
Trigger: CGGAAAATTAGGTTCATTTCACAGGACACAGCAGTG...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
3UTR-3UTR GCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCAGACCTGAGTGGCACTaGCCATCCACTGAAGGCCCA +
Preference number: 2 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGRPEWH*PSTEGP
Trigger: TGGGCCTTCAGTGGATGGGCAGTGCCACTCAGGTCT...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
3UTR-3UTR TCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCCACCAGCCACACTTGTaGCTGGCAGAGATAACCTCT +
Preference number: 2 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGHQPHL*LAEITS
Trigger: AGAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTG...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
3UTR-3UTR GCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCCATACATATCTGATATaGTTTCACACCAGGATTCAG +
Preference number: 2 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLHTYLI*FHTRIQ
Trigger: CTGAATCCTGGTGTGAAAGCATATCAGATATGTATG...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
3UTR-3UTR CCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCAAATCCTTAAATCTATaGGGATGTGTGGTAGATAAG +
Preference number: 2 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLKSLNL*GCVVDK
Trigger: CTTATCTACCACACATCCCCATAGATTTAAGGATTT...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
3UTR-3UTR CCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACATAGGAACGCCTGAGTaGCCATTTAGAGTGCTGCAT +
Preference number: 2 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYIGTPE*PFRVLH
Trigger: ATGCAGCACTCTAAATGGCCACTCAGGCGTTCCTAT...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
3UTR-3UTR CCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCATAGGAACGCCTGAGTaGCCATTTAGAGTGCTGCAT +
Preference number: 2 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGIGTPE*PFRVLH
Trigger: ATGCAGCACTCTAAATGGCCACTCAGGCGTTCCTAT...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
3UTR-3UTR CCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTATAGGAACGCCTGAGTaGCCATTTAGAGTGCTGCAT +
Preference number: 2 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIIGTPE*PFRVLH
Trigger: ATGCAGCACTCTAAATGGCCACTCAGGCGTTCCTAT...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
3UTR-3UTR TCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCACTGCTGTGTCCTGTaGAATGAACCTAATTTTCCG +
Preference number: 2 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIHCCVL*NEPNFP
Trigger: CGGAAAATTAGGTTCATTTCACAGGACACAGCAGTG...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
3UTR-3UTR TCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACCAGTTCATACATATCTaGTATGCTTTCACACCAGGA +
Preference number: 2 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYQFIHI*YAFTPG
Trigger: TCCTGGTGTGAAAGCATATCAGATATGTATGAACTG...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
3UTR-3UTR TCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCACACTGCTGTGTCCTGTaGAATGAACCTAATTTTCCG +
Preference number: 2 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSHCCVL*NEPNFP
Trigger: CGGAAAATTAGGTTCATTTCACAGGACACAGCAGTG...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
3UTR-3UTR GCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACCATACATATCTGATATaGTTTCACACCAGGATTCAG +
Preference number: 2 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYHTYLI*FHTRIQ
Trigger: CTGAATCCTGGTGTGAAAGCATATCAGATATGTATG...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
3UTR-3UTR CCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATATAGGAACGCCTGAGTaGCCATTTAGAGTGCTGCAT +
Preference number: 2 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNIGTPE*PFRVLH
Trigger: ATGCAGCACTCTAAATGGCCACTCAGGCGTTCCTAT...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
3UTR-3UTR CAA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCAAAGGGTTAATTTACTaGGGGTTTATCAGCACACCA +
Preference number: 3 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLKGLIY*GFISTP
Trigger: TGGTGTGCTGATAAACCCCAAGTAAATTAACCCTTT...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
3UTR-3UTR CAA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTAAAGGGTTAATTTACTaGGGGTTTATCAGCACACCA +
Preference number: 3 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIKGLIY*GFISTP
Trigger: TGGTGTGCTGATAAACCCCAAGTAAATTAACCCTTT...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
3UTR-3UTR CAA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCGGCAAACAGGACTACTaGTTTTCCTTACTTCATTTT +
Preference number: 3 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGGKQDY*FSLLHF
Trigger: AAAATGAAGTAAGGAAAACAAGTAGTCCTGTTTGCC...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
3UTR-3UTR CAA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCAAAAGGGTTAATTTACTaGGGGTTTATCAGCACACCA +
Preference number: 3 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSKGLIY*GFISTP
Trigger: TGGTGTGCTGATAAACCCCAAGTAAATTAACCCTTT...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATGGCGTCCTCATCCCCTaGCCCAGTGTAGGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDGVLIP*PSVGVV
Trigger: GACAACACCTACACTGGGTCAGGGGATGAGGACGCC...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCGGCGTCCTCATCCCCTaGCCCAGTGTAGGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLGVLIP*PSVGVV
Trigger: GACAACACCTACACTGGGTCAGGGGATGAGGACGCC...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCGAAACCCCAGAGACCTaGGTGGCACTGCCCATCCAC +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLETPET*VALPIH
Trigger: GTGGATGGGCAGTGCCACTCAGGTCTCTGGGGTTTC...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCCCCCAGGTCAGCAGCTaGCCGCATTGGCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLPQVSS*PHWLGF
Trigger: AAAGCCAAGCCAATGCGGGCAGCTGCTGACCTGGGG...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATGTCCAGGAAACCAACTaGAGAATCAGCCCGGAGGCG +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDVQETN*RISPEA
Trigger: CGCCTCCGGGCTGATTCTCCAGTTGGTTTCCTGGAC...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATTTCAGGGCATCTTCCTaGTCTCGCCGCCGTCTTACT +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDFRASS*SRRRLT
Trigger: AGTAAGACGGCGGCGAGATCAGGAAGATGCCCTGAA...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATTTTCTACTGGTGGCCTaGGGATCTTCTCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDFLLVA*GSSPSP
Trigger: TGGGGAGGGAGAAGATCCTCAGGCCACCAGTAGAAA...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATCTGGGTCCTCTTCGCTaGGGCTTTTCCCTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDLGPLR*GFSLSH
Trigger: ATGACTCAGGGAAAAGCCTCAGCGAAGAGGACCCAG...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAGTCTCTCCTCAGCCTaGTGTAAGCCTAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDSLSSA*CKPSSS
Trigger: GGAGCTGCTAGGCTTACAGCAGGCTGAGGAGAGACT...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCGTCCAGGAAACCAACTaGAGAATCAGCCCGGAGGCG +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLVQETN*RISPEA
Trigger: CGCCTCCGGGCTGATTCTCCAGTTGGTTTCCTGGAC...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATGCCGGACAGCTACTCTaGAGTCCAGGAAACCAACTG +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDAGQLL*SPGNQL
Trigger: CAGTTGGTTTCCTGGACTCCAGAGTAGCTGTCCGGC...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAGCAGCTGCCCGCATTaGCTTGGCTTTCTGAGGTGT +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDSSCPH*LGFLRC
Trigger: ACACCTCAGAAAGCCAAGCCAATGCGGGCAGCTGCT...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATATTGGCTTGGCTTTCTaGGGTGTGCACTGTATGGGC +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDIGLAF*GVHCMG
Trigger: GCCCATACAGTGCACACCTCAGAAAGCCAAGCCAAT...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATCACCAGCCACACTTGTaGCTGGCAGAGATAACCTCT +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDHQPHL*LAEITS
Trigger: AGAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTG...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCAGTCTCTCCTCAGCCTaGTGTAAGCCTAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLSLSSA*CKPSSS
Trigger: GGAGCTGCTAGGCTTACAGCAGGCTGAGGAGAGACT...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAATTCCACCCAGAGCTaGCCAACTGGTACTGAAGGC +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDNSTQS*PTGTEG
Trigger: GCCTTCAGTACCAGTTGGGCAGCTCTGGGTGGAATT...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATTTCCCTCATGATTCCTaGTGGGTCCTCTTCGCTGAG +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDFPHDS*WVLFAE
Trigger: CTCAGCGAAGAGGACCCAGCAGGAATCATGAGGGAA...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCTCTGCACACCACCACTaGCACCCTAGCATGGAAGTC +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLSAHHH*HPSMEV
Trigger: GACTTCCATGCTAGGGTGCCAGTGGTGGTGTGCAGA...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR CCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCCCTCATGATTCCTGCTaGGTCCTCTTCGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLPHDSC*VLFAEA
Trigger: AGCCTCAGCGAAGAGGACCCAGCAGGAATCATGAGG...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCATTGGCTTGGCTTTCTaGGGTGTGCACTGTATGGGC +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLIGLAF*GVHCMG
Trigger: GCCCATACAGTGCACACCTCAGAAAGCCAAGCCAAT...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATGTCGTCTTACAGTTCTaGAGCCTCTTGTGTCTTGCC +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDVVLQF*SLLCLA
Trigger: GGCAAGACACAAGAGGCTGCAGAACTGTAAGACGAC...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATCCTCTTCTTTTGTTATaGCTGTGTCCCCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDPLLLL*LCPLQH
Trigger: GTGCTGCAGGGGACACAGGCATAACAAAAGAAGAGG...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCTTCCCTCATGATTCCTaGTGGGTCCTCTTCGCTGAG +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLFPHDS*WVLFAE
Trigger: CTCAGCGAAGAGGACCCAGCAGGAATCATGAGGGAA...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAAGGACAGGAATGACTaGTGGATTCCTCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDKDRND*WIPLLE
Trigger: CTCCAGCAGAGGAATCCACCAGTCATTCCTGTCCTT...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATTGCTCTCCACGTTTCTaGTCAACAGTCAACAGATGC +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDCSPRF*STVNRC
Trigger: GCATCTGTTGACTGTTGATCAGAAACGTGGAGAGCA...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATACTGGAAAGGCTACCTaGAGAGCCTTTAAACTGTGG +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDTGKAT*RAFKLW
Trigger: CCACAGTTTAAAGGCTCTTCAGGTAGCCTTTCCAGT...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCCCTCTTCTTTTGTTATaGCTGTGTCCCCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLPLLLL*LCPLQH
Trigger: GTGCTGCAGGGGACACAGGCATAACAAAAGAAGAGG...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATCGGCGTTTCTCTTGGTaGCTCTTCTTTTGTTATGCC +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDRRFSW*LFFCYA
Trigger: GGCATAACAAAAGAAGAGGCACCAAGAGAAACGCCG...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACGCCCGGAGGCGAGTCTaGCAGGGACGTTGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYARRRV*QGRWEK
Trigger: CTTCTCCCAACGTCCCTGCCAGACTCGCCTCCGGGC...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATACTGGCACCCTAGCATaGAAGTCTGCATCAACATCA +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDTGTLA*KSASTS
Trigger: TGATGTTGATGCAGACTTCCATGCTAGGGTGCCAGT...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR CCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAGTAGGGATCTTCAATaGCAATGCGCTTTTTGGGCC +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDSRDLQ*QCAFWA
Trigger: GGCCCAAAAAGCGCATTGCCATTGAAGATCCCTACT...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATGTAGCACCAGGACCTTaGGCCAAAACTGAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDVAPGP*AKTEFL
Trigger: CAAAAACTCAGTTTTGGCCCAAGGTCCTGGTGCTAC...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCAAGGACAGGAATGACTaGTGGATTCCTCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLKDRND*WIPLLE
Trigger: CTCCAGCAGAGGAATCCACCAGTCATTCCTGTCCTT...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATATAGGAACGCCTGAGTaGCCATTTAGAGTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDIGTPE*PFRVLH
Trigger: ATGCAGCACTCTAAATGGCCACTCAGGCGTTCCTAT...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAGCCATCTCTTACTCTaGTCTTTGTGGCTGTCATTC +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDSHLLL*SLWLSF
Trigger: GAATGACAGCCACAAAGATCAGAGTAAGAGATGGCT...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCTGCTCTCCACGTTTCTaGTCAACAGTCAACAGATGC +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLCSPRF*STVNRC
Trigger: GCATCTGTTGACTGTTGATCAGAAACGTGGAGAGCA...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATCTAGGTCTGGACCTCTaGTTCTTGTTTTCAGGACTT +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDLGLDL*FLFSGL
Trigger: AAGTCCTGAAAACAAGAAGCAGAGGTCCAGACCTAG...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCCACAGAAGACCACTTTaGTTTTCTCTGCACACCACC +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLHRRPL*FSLHTT
Trigger: GGTGGTGTGCAGAGAAAAGCAAAGTGGTCTTCTGTG...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR GCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCCGGCGTTTCTCTTGGTaGCTCTTCTTTTGTTATGCC +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLRRFSW*LFFCYA
Trigger: GGCATAACAAAAGAAGAGGCACCAAGAGAAACGCCG...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATTCAACAGTCAACAGATaGTTGCCCTTCCTTCCAACT +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDSTVNR*LPFLPT
Trigger: AGTTGGAAGGAAGGGCAAGCATCTGTTGACTGTTGA...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCGTCTGGCAGGGACGTTaGGAGAAGGCGCCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGVWQGR*EKAPKS
Trigger: GCTCTTGGGCGCCTTCTCCCAACGTCCCTGCCAGAC...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCACTGGCACCCTAGCATaGAAGTCTGCATCAACATCA +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLTGTLA*KSASTS
Trigger: TGATGTTGATGCAGACTTCCATGCTAGGGTGCCAGT...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR CCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCAGTAGGGATCTTCAATaGCAATGCGCTTTTTGGGCC +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLSRDLQ*QCAFWA
Trigger: GGCCCAAAAAGCGCATTGCCATTGAAGATCCCTACT...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATATCATTTCTGATGTCTaGCCCTGTACTGAGTGGGTA +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDIISDV*PCTEWV
Trigger: TACCCACTCAGTACAGGGCCAGACATCAGAAATGAT...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCGACAGGAATGACTGGTaGATTCCTCTGCTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLDRNDW*IPLLEK
Trigger: TTTCTCCAGCAGAGGAATCCACCAGTCATTCCTGTC...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCCCATTTTTCTACTGGTaGCCTGAGGATCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLPFFYW*PEDLLP
Trigger: AGGGAGAAGATCCTCAGGCCACCAGTAGAAAAATGG...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCAGCCATCTCTTACTCTaGTCTTTGTGGCTGTCATTC +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLSHLLL*SLWLSF
Trigger: GAATGACAGCCACAAAGATCAGAGTAAGAGATGGCT...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATACCTTGGGCCAAAACTaGGTTTTTGAGCTTATCATC +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDTLGQN*VFELII
Trigger: GATGATAAGCTCAAAAACTCAGTTTTGGCCCAAGGT...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATTTTCAGGGTGGACACTaGTGTGTTCATTTCCCATTT +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDFQGGH*CVHFPF
Trigger: AAATGGGAAATGAACACATCAGTGTCCACCCTGAAA...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATCAAGGTCACTCTGTTTaGACCCAAATCCATTTTTGG +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDQGHSV*TQIHFW
Trigger: CCAAAAATGGATTTGGGTTCAAACAGAGTGACCTTG...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375963.8
CDS-3UTR TCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATGATGTTTCTCAGACCTaGATGTTTTCTGAGGACTCT +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDDVSQT*MFSEDS
Trigger: AGAGTCCTCAGAAAACATTCAGGTCTGAGAAACATC...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATCCTTTGGAAATCCCTTaGCAGGAATACCAAATACTC +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDPLEIP*QEYQIL
Trigger: GAGTATTTGGTATTCCTGTCAAGGGATTTCCAAAGG...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATGCTGAGGCTTTTCCCTaGGTCATATATTTACTGGAA +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDAEAFP*VIYLLE
Trigger: TTCCAGTAAATATATGACTCAGGGAAAAGCCTCAGC...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCCACTGCTGTGTCCTGTaGAATGAACCTAATTTTCCG +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLHCCVL*NEPNFP
Trigger: CGGAAAATTAGGTTCATTTCACAGGACACAGCAGTG...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACGAAACCCCAGAGACCTaGGTGGCACTGCCCATCCAC +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYETPET*VALPIH
Trigger: GTGGATGGGCAGTGCCACTCAGGTCTCTGGGGTTTC...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCGAAACCCCAGAGACCTaGGTGGCACTGCCCATCCAC +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGETPET*VALPIH
Trigger: GTGGATGGGCAGTGCCACTCAGGTCTCTGGGGTTTC...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCAATGGCAATGCCAACTaGATTTATCTGGGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLNGNAN*IYLGGC
Trigger: ACACCCTCCCAGATAAATGCAGTTGGCATTGCCATT...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATCCAAGGGCAGTTAAATaGTTTGTTGTCAGACAAGCA +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDPRAVK*FVVRQA
Trigger: TGCTTGTCTGACAACAAAGCATTTAACTGCCCTTGG...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR GCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCTCAACAGTCAACAGATaGTTGCCCTTCCTTCCAACT +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLSTVNR*LPFLPT
Trigger: AGTTGGAAGGAAGGGCAAGCATCTGTTGACTGTTGA...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATACTCATTATTACGTGTaGTGCCACAGACAACATGCT +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDTHYYV*CHRQHA
Trigger: AGCATGTTGTCTGTGGCAGCACACGTAATAATGAGT...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCTGGCTTTCTGAGGTGTaGACTGTATGGGCTTATCTT +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLWLSEV*TVWAYL
Trigger: AAGATAAGCCCATACAGTGCACACCTCAGAAAGCCA...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACCCCCAGGTCAGCAGCTaGCCGCATTGGCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYPQVSS*PHWLGF
Trigger: AAAGCCAAGCCAATGCGGGCAGCTGCTGACCTGGGG...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATATGCATATGGATTGCTaGAAACAGCACATGGTCCTT +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDMHMDC*KQHMVL
Trigger: AAGGACCATGTGCTGTTTCCAGCAATCCATATGCAT...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATCTTCCATTTCTGACGTaGTTTCTAGGCTTGTTAGGT +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDLPFLT*FLGLLG
Trigger: ACCTAACAAGCCTAGAAACCACGTCAGAAATGGAAG...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATCCTTGTTATCTAAAGTaGCAAGTCCCTCACACTCTT +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDPCYLK*QVPHTL
Trigger: AAGAGTGTGAGGGACTTGCCACTTTAGATAACAAGG...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATGGTGGATTCCTCTGCTaGAGAAAATATAGCACCATA +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDGGFLC*RKYSTI
Trigger: TATGGTGCTATATTTTCTCCAGCAGAGGAATCCACC...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATGAGGTGTGCACTGTATaGGCTTATCTTCTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDEVCTV*AYLLLL
Trigger: CAACAAAAGAAGATAAGCCCATACAGTGCACACCTC...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATTTACATCCGAATTTTTaGAACCCAATCTGCTACAGG +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDLHPNF*NPICYR
Trigger: CCTGTAGCAGATTGGGTTTCAAAAATTCGGATGTAA...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATTATTCAAACACAGGTTaGCTATTTAGGGTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDYSNTG*LFRVLA
Trigger: GGCAAGAACCCTAAATAGTCAACCTGTGTTTGAATA...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCGATGTTTCTCAGACCTaGATGTTTTCTGAGGACTCT +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLDVSQT*MFSEDS
Trigger: AGAGTCCTCAGAAAACATTCAGGTCTGAGAAACATC...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAAAAGCCTTGTGTTATaGAGGGCCAATGTGTTATAC +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDKSLVL*RANVLY
Trigger: GTATAACACATTGGCCCTTCATAACACAAGGCTTTT...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATCCAGCTCCAAGATTATaGTTCAAATCAAAGGGATCT +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDPAPRL*FKSKGS
Trigger: AGATCCCTTTGATTTGAATCATAATCTTGGAGCTGG...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCGCTGAGGCTTTTCCCTaGGTCATATATTTACTGGAA +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLAEAFP*VIYLLE
Trigger: TTCCAGTAAATATATGACTCAGGGAAAAGCCTCAGC...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATCACGAAATAAGGTTTTaGTGTATCTCCCATGGTCTT +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDHEIRF*CISHGL
Trigger: AAGACCATGGGAGATACAGCAAAACCTTATTTCGTG...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATCCTAGCATGGAAGTCTaGATCAACATCAATAAAGGA +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDPSMEV*ININKG
Trigger: TCCTTTATTGATGTTGATGCAGACTTCCATGCTAGG...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR GCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCAGGCCCAACCATAACTaGCCAACAGATTCTGTATTT +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLRPNHN*PTDSVF
Trigger: AAATACAGAATCTGTTGGGCAGTTATGGTTGGGCCT...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCCCCAGGTCAGCAGCTaGCCGCATTGGCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIPQVSS*PHWLGF
Trigger: AAAGCCAAGCCAATGCGGGCAGCTGCTGACCTGGGG...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCAGCCCGGAGGCGAGTCTaGCAGGGACGTTGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSARRRV*QGRWEK
Trigger: CTTCTCCCAACGTCCCTGCCAGACTCGCCTCCGGGC...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCATGCATATGGATTGCTaGAAACAGCACATGGTCCTT +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLMHMDC*KQHMVL
Trigger: AAGGACCATGTGCTGTTTCCAGCAATCCATATGCAT...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATGTACCACTTTGTCAATaGCAATGCCAACTGCATTTA +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDVPLCQ*QCQLHL
Trigger: TAAATGCAGTTGGCATTGCCATTGACAAAGTGGTAC...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCGGTGGATTCCTCTGCTaGAGAAAATATAGCACCATA +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLGGFLC*RKYSTI
Trigger: TATGGTGCTATATTTTCTCCAGCAGAGGAATCCACC...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCGAGGTGTGCACTGTATaGGCTTATCTTCTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLEVCTV*AYLLLL
Trigger: CAACAAAAGAAGATAAGCCCATACAGTGCACACCTC...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCTTACATCCGAATTTTTaGAACCCAATCTGCTACAGG +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLLHPNF*NPICYR
Trigger: CCTGTAGCAGATTGGGTTTCAAAAATTCGGATGTAA...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATATATGTTCACGAGCCTaGTCTTCTATAATTGTTGGA +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDICSRA*SSIIVG
Trigger: TCCAACAATTATAGAAGATCAGGCTCGTGAACATAT...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR TCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCAAAAGCCTTGTGTTATaGAGGGCCAATGTGTTATAC +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLKSLVL*RANVLY
Trigger: GTATAACACATTGGCCCTTCATAACACAAGGCTTTT...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCCCAGCTCCAAGATTATaGTTCAAATCAAAGGGATCT +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLPAPRL*FKSKGS
Trigger: AGATCCCTTTGATTTGAATCATAATCTTGGAGCTGG...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAAAGTATTCCATTTTTaGGGGGTAGTCCTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDKVFHF*GVVLWK
Trigger: TTTCCAAAGGACTACCCCTCAAAAATGGAATACTTT...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCTTTCTACTGGTGGCCTaGGGATCTTCTCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGFLLVA*GSSPSP
Trigger: TGGGGAGGGAGAAGATCCTCAGGCCACCAGTAGAAA...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACTTTCTACTGGTGGCCTaGGGATCTTCTCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYFLLVA*GSSPSP
Trigger: TGGGGAGGGAGAAGATCCTCAGGCCACCAGTAGAAA...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCCACGAAATAAGGTTTTaGTGTATCTCCCATGGTCTT +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLHEIRF*CISHGL
Trigger: AAGACCATGGGAGATACAGCAAAACCTTATTTCGTG...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCTTTTTAGCCTGTCAATaGAGTCTCTCTTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLFLACQ*SLSSVS
Trigger: AGAGACTGAAGAGAGACTGCATTGACAGGCTAAAAA...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATCTCTTTTCCTTGATATaGTTATGGGCAAATGCAATG +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDLFSLI*LWANAM
Trigger: CATTGCATTTGCCCATAAGCATATCAAGGAAAAGAG...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATCATACATATCTGATATaGTTTCACACCAGGATTCAG +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDHTYLI*FHTRIQ
Trigger: CTGAATCCTGGTGTGAAAGCATATCAGATATGTATG...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTAGACCTGAGTGGCACTaGCCATCCACTGAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIRPEWH*PSTEGP
Trigger: TGGGCCTTCAGTGGATGGGCAGTGCCACTCAGGTCT...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCAGTCTGGCAGGGACGTTaGGAGAAGGCGCCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSVWQGR*EKAPKS
Trigger: GCTCTTGGGCGCCTTCTCCCAACGTCCCTGCCAGAC...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACGCCGGACAGCTACTCTaGAGTCCAGGAAACCAACTG +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYAGQLL*SPGNQL
Trigger: CAGTTGGTTTCCTGGACTCCAGAGTAGCTGTCCGGC...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCGTACCACTTTGTCAATaGCAATGCCAACTGCATTTA +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLVPLCQ*QCQLHL
Trigger: TAAATGCAGTTGGCATTGCCATTGACAAAGTGGTAC...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCCTGAGACATAATGGCTaGAAACTGGATGTCAATGTT +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLLRHNG*KLDVNV
Trigger: AACATTGACATCCAGTTTCCAGCCATTATGTCTCAG...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR CCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCAATCGGCGTTTCTCTTaGTGCCTCTTCTTTTGTTAT +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLNRRFS*CLFFCY
Trigger: ATAACAAAAGAAGAGGCACCAAGAGAAACGCCGATT...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATCTCTTTAAGAGTAAGTaGCTGTACCTTACAGGTATT +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDLFKSK*LYLTGI
Trigger: AATACCTGTAAGGTACAGCCACTTACTCTTAAAGAG...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATGAGTTAACATCTGCTTaGATACAGTCTGAGTTTTCA +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDELTSA*IQSEFS
Trigger: TGAAAACTCAGACTGTATCCAAGCAGATGTTAACTC...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCCTTCCTGTTTCTGGATaGTATACTTTATCACCCTTG +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLLPVSG*YTLSPL
Trigger: CAAGGGTGATAAAGTATACCATCCAGAAACAGGAAG...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATTTAGCTGTGGGATTTTaGAAGCCTTCTAAATCCAAA +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDLAVGF*KPSKSK
Trigger: TTTGGATTTAGAAGGCTTCCAAAATCCCACAGCTAA...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCACTGAGTGGGTAAAGTaGTTTAGAGAGTCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLTEWVK*FRESSS
Trigger: ACTAGAAGACTCTCTAAACCACTTTACCCACTCAGT...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATGCTCAATTTAGTTCCTaGAAAGTCCTGTCTTATGAA +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDAQFSS*KVLSYE
Trigger: TTCATAAGACAGGACTTTCCAGGAACTAAATTGAGC...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375963.8
CDS-3UTR CCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACAGCAGCTGCCCGCATTaGCTTGGCTTTCTGAGGTGT +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYSSCPH*LGFLRC
Trigger: ACACCTCAGAAAGCCAAGCCAATGCGGGCAGCTGCT...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAGAGCCTTTAAACTGTaGGCATTCCTTTTTAATGTG +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDRAFKL*AFLFNV
Trigger: CACATTAAAAAGGAATGCCCACAGTTTAAAGGCTCT...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACCCTCATGATTCCTGCTaGGTCCTCTTCGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYPHDSC*VLFAEA
Trigger: AGCCTCAGCGAAGAGGACCCAGCAGGAATCATGAGG...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCCCTCATGATTCCTGCTaGGTCCTCTTCGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGPHDSC*VLFAEA
Trigger: AGCCTCAGCGAAGAGGACCCAGCAGGAATCATGAGG...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCACAGGTATTTGCAGCTaGACTGGTAGCACCAGGACC +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGTGICS*TGSTRT
Trigger: GGTCCTGGTGCTACCAGTTCAGCTGCAAATACCTGT...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCAGGCGTCCTCATCCCCTaGCCCAGTGTAGGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSGVLIP*PSVGVV
Trigger: GACAACACCTACACTGGGTCAGGGGATGAGGACGCC...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCATGTGTTATACAAACTaGTATCTACTTCCAGACCAC +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLMCYTN*YLLPDH
Trigger: GTGGTCTGGAAGTAGATATCAGTTTGTATAACACAT...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCTCTGTGTACTTGTTGTaGATTTCTTTGTCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLSVYLL*ISLSSL
Trigger: CAAAGAGGACAAAGAAATTCACAACAAGTACACAGA...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCATTGGCTTGGCTTTCTaGGGTGTGCACTGTATGGGC +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGIGLAF*GVHCMG
Trigger: GCCCATACAGTGCACACCTCAGAAAGCCAAGCCAAT...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCTGGGTCCTCTTCGCTaGGGCTTTTCCCTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRILGPLR*GFSLSH
Trigger: ATGACTCAGGGAAAAGCCTCAGCGAAGAGGACCCAG...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCTCAATTTTCTTACTTTaGACCTCCGGGGCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGSIFLL*TSGARP
Trigger: CGGCCTGGCCCCGGAGGTGCAAAGTAAGAAAATTGA...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTAGTCTCTCCTCAGCCTaGTGTAAGCCTAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRISLSSA*CKPSSS
Trigger: GGAGCTGCTAGGCTTACAGCAGGCTGAGGAGAGACT...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCAATTCCACCCAGAGCTaGCCAACTGGTACTGAAGGC +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGNSTQS*PTGTEG
Trigger: GCCTTCAGTACCAGTTGGGCAGCTCTGGGTGGAATT...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATCATTCCTTTTTAATGTaGCCTTCTCTTCCACAAATA +
Preference number: 4 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDHSFLM*PSLPQI
Trigger: TATTTGTGGAAGAGAAGGGCACATTAAAAAGGAATG...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATGTCTGGCAGGGACGTTaGGAGAAGGCGCCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNVWQGR*EKAPKS
Trigger: GCTCTTGGGCGCCTTCTCCCAACGTCCCTGCCAGAC...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCGGGTTGACTGTAGATTaGGTTTTTAAATGCATATGG +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLGLTVD*VFKCIW
Trigger: CCATATGCATTTAAAAACCCAATCTACAGTCAACCC...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTTCTGCACACCACCACTaGCACCCTAGCATGGAAGTC +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRISAHHH*HPSMEV
Trigger: GACTTCCATGCTAGGGTGCCAGTGGTGGTGTGCAGA...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR CCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCCTCTTTAAGAGTAAGTaGCTGTACCTTACAGGTATT +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLLFKSK*LYLTGI
Trigger: AATACCTGTAAGGTACAGCCACTTACTCTTAAAGAG...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCTTTCCTTCCTGTTTCTaGATGGTATACTTTATCACC +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLFPSCF*MVYFIT
Trigger: GGTGATAAAGTATACCATCCAGAAACAGGAAGGAAA...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCGCTCAATTTAGTTCCTaGAAAGTCCTGTCTTATGAA +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLAQFSS*KVLSYE
Trigger: TTCATAAGACAGGACTTTCCAGGAACTAAATTGAGC...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375963.8
CDS-3UTR CCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCTCCTTCAATAATGGCTaGAAACTGGATGTCAATGTT +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLSFNNG*KLDVNV
Trigger: AACATTGACATCCAGTTTCCAGCCATTATTGAAGGA...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375960.6
CDS-3UTR TCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCTGCCCAACTGGTACTaGAGGCTGGTGTTTCACATC +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRILPNWY*RLVFHI
Trigger: GATGTGAAACACCAGCCTTCAGTACCAGTTGGGCAG...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCACCAGCCACACTTGTaGCTGGCAGAGATAACCTCT +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIHQPHL*LAEITS
Trigger: AGAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTG...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCCCTCTTCTTTTGTTATaGCTGTGTCCCCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGPLLLL*LCPLQH
Trigger: GTGCTGCAGGGGACACAGGCATAACAAAAGAAGAGG...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTAATTCCACCCAGAGCTaGCCAACTGGTACTGAAGGC +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRINSTQS*PTGTEG
Trigger: GCCTTCAGTACCAGTTGGGCAGCTCTGGGTGGAATT...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACGATGACCCTCTCGTTTaGATAAGCTGCACACTACCG +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYDDPLV*ISCTLP
Trigger: CGGTAGTGTGCAGCTTATGCAAACGAGAGGGTCATC...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR GCA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCCATTCCTTTTTAATGTaGCCTTCTCTTCCACAAATA +
Preference number: 4 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLHSFLM*PSLPQI
Trigger: TATTTGTGGAAGAGAAGGGCACATTAAAAAGGAATG...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTTTCCCTCATGATTCCTaGTGGGTCCTCTTCGCTGAG +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIFPHDS*WVLFAE
Trigger: CTCAGCGAAGAGGACCCAGCAGGAATCATGAGGGAA...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCAAGACCTGAGTGGCACTaGCCATCCACTGAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSRPEWH*PSTEGP
Trigger: TGGGCCTTCAGTGGATGGGCAGTGCCACTCAGGTCT...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCAGTCCAGGAAACCAACTaGAGAATCAGCCCGGAGGCG +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSVQETN*RISPEA
Trigger: CGCCTCCGGGCTGATTCTCCAGTTGGTTTCCTGGAC...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACAAGGACAGGAATGACTaGTGGATTCCTCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYKDRND*WIPLLE
Trigger: CTCCAGCAGAGGAATCCACCAGTCATTCCTGTCCTT...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACAAGAGGACATCTGGCTaGGACATAATGGCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYKRTSG*DIMAGN
Trigger: GTTTCCAGCCATTATGTCTCAGCCAGATGTCCTCTT...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR TCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCAAGAGGACATCTGGCTaGGACATAATGGCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGKRTSG*DIMAGN
Trigger: GTTTCCAGCCATTATGTCTCAGCCAGATGTCCTCTT...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR TCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCTGCTTGGATACAGTCTaGGTTTTCAGGGTGGACACT +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGCLDTV*VFRVDT
Trigger: AGTGTCCACCCTGAAAACTCAGACTGTATCCAAGCA...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACTGCTTGGATACAGTCTaGGTTTTCAGGGTGGACACT +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYCLDTV*VFRVDT
Trigger: AGTGTCCACCCTGAAAACTCAGACTGTATCCAAGCA...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCATTCAGGGCATCTTCCTaGTCTCGCCGCCGTCTTACT +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSFRASS*SRRRLT
Trigger: AGTAAGACGGCGGCGAGATCAGGAAGATGCCCTGAA...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACACTGGAAAGGCTACCTaGAGAGCCTTTAAACTGTGG +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYTGKAT*RAFKLW
Trigger: CCACAGTTTAAAGGCTCTTCAGGTAGCCTTTCCAGT...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCACTGGGTCCTCTTCGCTaGGGCTTTTCCCTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSLGPLR*GFSLSH
Trigger: ATGACTCAGGGAAAAGCCTCAGCGAAGAGGACCCAG...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCATTTTCCTTCCCTCATaGTTCCTGCTGGGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGIFLPS*FLLGPL
Trigger: AAGAGGACCCAGCAGGAATCATGAGGGAAGGAAAAT...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACATTTTCCTTCCCTCATaGTTCCTGCTGGGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYIFLPS*FLLGPL
Trigger: AAGAGGACCCAGCAGGAATCATGAGGGAAGGAAAAT...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTGTCGTCTTACAGTTCTaGAGCCTCTTGTGTCTTGCC +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIVVLQF*SLLCLA
Trigger: GGCAAGACACAAGAGGCTGCAGAACTGTAAGACGAC...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACTCTGCAGGTGTACTTTaGTGTAGGGTAGTTTCGTGG +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYSAGVL*CRVVSW
Trigger: CCACGAAACTACCCTACAGCAAAGTACACCTGCAGA...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGGGCGATCTATACTaGAAAGCTTTGCCCAGTACC +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIQGDLY*KALPST
Trigger: GGTACTGGGCAAAGCTTTGCAGTATAGATCGCCCTG...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR GCA 90 bp TACCAAATGGTAAATTTACAGGGTCAGTCTCTTGTTCGTCTCAGGACCATACATCAGGGCGATCTATACTaGAAAGCTTTGCCCAGTACC +
Preference number: 4 (lower is better)
Translates to: YQMVNLQGQSLVRLRTIHQGDLY*KALPST
Trigger: GGTACTGGGCAAAGCTTTGCAGTATAGATCGCCCTG...ATGTATGGTCCTGAGACGAACAAGAGACTGACCCTGTAAATTTACCATTTGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375948.2
CDS-3UTR CCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCCACATGGTCCTTTTCTaGGGGTATTCCCATAGTTCC +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGHMVLF*GYSHSS
Trigger: GGAACTATGGGAATACCCCCAGAAAAGGACCATGTG...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCGCTGGAAACAGCACATaGTCCTTTTCTGGGGGTATT +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGAGNST*SFSGGI
Trigger: AATACCCCCAGAAAAGGACCATGTGCTGTTTCCAGC...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTGGCAAACACATAAGGTaGCAGACCTCCTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIGKHIR*QTSFFR
Trigger: CCTGAAGAAGGAGGTCTGCCACCTTATGTGTTTGCC...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR CCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACTGGCAATGCGCTTTTTaGGCCAATCCTTCAATTCCC +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYWQCAF*ANPSIP
Trigger: GGGAATTGAAGGATTGGCCCAAAAAGCGCATTGCCA...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCTGGCAATGCGCTTTTTaGGCCAATCCTTCAATTCCC +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGWQCAF*ANPSIP
Trigger: GGGAATTGAAGGATTGGCCCAAAAAGCGCATTGCCA...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCAGTAGGGATCTTCAATaGCAATGCGCTTTTTGGGCC +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGSRDLQ*QCAFWA
Trigger: GGCCCAAAAAGCGCATTGCCATTGAAGATCCCTACT...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACGTAGCACCAGGACCTTaGGCCAAAACTGAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYVAPGP*AKTEFL
Trigger: CAAAAACTCAGTTTTGGCCCAAGGTCCTGGTGCTAC...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCTGGCCCTGTACTGAGTaGGTAAAGTGGTTTAGAGAG +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGWPCTE*VKWFRE
Trigger: CTCTCTAAACCACTTTACCCACTCAGTACAGGGCCA...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCAAGCAGCTGCCCGCATTaGCTTGGCTTTCTGAGGTGT +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSSSCPH*LGFLRC
Trigger: ACACCTCAGAAAGCCAAGCCAATGCGGGCAGCTGCT...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACCCATTTTTCTACTGGTaGCCTGAGGATCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYPFFYW*PEDLLP
Trigger: AGGGAGAAGATCCTCAGGCCACCAGTAGAAAAATGG...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCACTGCCCAACTGGTACTaGAGGCTGGTGTTTCACATC +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSLPNWY*RLVFHI
Trigger: GATGTGAAACACCAGCCTTCAGTACCAGTTGGGCAG...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCAACAGGTATTTGCAGCTaGACTGGTAGCACCAGGACC +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSTGICS*TGSTRT
Trigger: GGTCCTGGTGCTACCAGTTCAGCTGCAAATACCTGT...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTTGCTTGGATACAGTCTaGGTTTTCAGGGTGGACACT +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRICLDTV*VFRVDT
Trigger: AGTGTCCACCCTGAAAACTCAGACTGTATCCAAGCA...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTTGCTCTCCACGTTTCTaGTCAACAGTCAACAGATGC +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRICSPRF*STVNRC
Trigger: GCATCTGTTGACTGTTGATCAGAAACGTGGAGAGCA...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATTTCAGGGCATCTTCCTaGTCTCGCCGCCGTCTTACT +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNFRASS*SRRRLT
Trigger: AGTAAGACGGCGGCGAGATCAGGAAGATGCCCTGAA...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATTTTCTACTGGTGGCCTaGGGATCTTCTCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNFLLVA*GSSPSP
Trigger: TGGGGAGGGAGAAGATCCTCAGGCCACCAGTAGAAA...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATCTGGGTCCTCTTCGCTaGGGCTTTTCCCTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNLGPLR*GFSLSH
Trigger: ATGACTCAGGGAAAAGCCTCAGCGAAGAGGACCCAG...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTATTTTCCTTCCCTCATaGTTCCTGCTGGGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIIFLPS*FLLGPL
Trigger: AAGAGGACCCAGCAGGAATCATGAGGGAAGGAAAAT...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCCACTGCTGTGTCCTGTaGAATGAACCTAATTTTCCG +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGHCCVL*NEPNFP
Trigger: CGGAAAATTAGGTTCATTTCACAGGACACAGCAGTG...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACCACTGCTGTGTCCTGTaGAATGAACCTAATTTTCCG +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYHCCVL*NEPNFP
Trigger: CGGAAAATTAGGTTCATTTCACAGGACACAGCAGTG...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCCTAGGTCTGGACCTCTaGTTCTTGTTTTCAGGACTT +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGLGLDL*FLFSGL
Trigger: AAGTCCTGAAAACAAGAAGCAGAGGTCCAGACCTAG...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACAATGGCAATGCCAACTaGATTTATCTGGGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYNGNAN*IYLGGC
Trigger: ACACCCTCCCAGATAAATGCAGTTGGCATTGCCATT...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCTGCCCAGTACCTAAATaGAATCACCAAAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGCPVPK*NHQRNQ
Trigger: CTGGTTCCTTTGGTGATTGCATTTAGGTACTGGGCA...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR GCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTAAGTGCTTAGCACAGTaGCTGGCACACAGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIKCLAQ*LAHSVQ
Trigger: TTGAACACTGTGTGCCAGGCACTGTGCTAAGCACTT...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277141.10
CDS-3UTR GCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACGATCTTCAATGGCAATaGGCTTTTTGGGCCAATCCT +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYDLQWQ*AFWANP
Trigger: AGGATTGGCCCAAAAAGCGCATTGCCATTGAAGATC...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACACTGGTGGATTCCTCTaGTGGAGAAAATATAGCACC +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYTGGFL*WRKYST
Trigger: GGTGCTATATTTTCTCCAGCAGAGGAATCCACCAGT...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCACATGGTCCTTTTCTaGGGGTATTCCCATAGTTCC +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIHMVLF*GYSHSS
Trigger: GGAACTATGGGAATACCCCCAGAAAAGGACCATGTG...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTATTTCTAGTCTTCCGTaGCTTCCTAGGTCTGGACCT +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIISSLP*LPRSGP
Trigger: AGGTCCAGACCTAGGAAGCCACGGAAGACTAGAAAT...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AAATTTACAGGGTCAGTCTCTTGTTCGTCTCAGGACCATACATATTTCAAAAATTCTGCACACCACCACTaGCACCCTAGCATGGAAGTC +
Preference number: 4 (lower is better)
Translates to: KFTGSVSCSSQDHTYFKNSAHHH*HPSMEV
Trigger: GACTTCCATGCTAGGGTGCCAGTGGTGGTGTGCAGA...ATTTTTGAAATATGTATGGTCCTGAGACGAACAAGAGACTGACCCTGTAAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375948.2
CDS-3UTR CCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTTGGCCCTGTACTGAGTaGGTAAAGTGGTTTAGAGAG +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIWPCTE*VKWFRE
Trigger: CTCTCTAAACCACTTTACCCACTCAGTACAGGGCCA...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTGACAGGAATGACTGGTaGATTCCTCTGCTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIDRNDW*IPLLEK
Trigger: TTTCTCCAGCAGAGGAATCCACCAGTCATTCCTGTC...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATAGCAGCTGCCCGCATTaGCTTGGCTTTCTGAGGTGT +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNSSCPH*LGFLRC
Trigger: ACACCTCAGAAAGCCAAGCCAATGCGGGCAGCTGCT...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATCCTCATGATTCCTGCTaGGTCCTCTTCGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNPHDSC*VLFAEA
Trigger: AGCCTCAGCGAAGAGGACCCAGCAGGAATCATGAGG...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACTGTGCCTCTTTTCCTTaGTATGCTTATGGGCAAATG +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYCASFP*YAYGQM
Trigger: CATTTGCCCATAAGCATATCAAGGAAAAGAGGCACA...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATCTGCCCAACTGGTACTaGAGGCTGGTGTTTCACATC +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNLPNWY*RLVFHI
Trigger: GATGTGAAACACCAGCCTTCAGTACCAGTTGGGCAG...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCACCTTGGGCCAAAACTaGGTTTTTGAGCTTATCATC +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGTLGQN*VFELII
Trigger: GATGATAAGCTCAAAAACTCAGTTTTGGCCCAAGGT...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACATCCAAAGTGCTCTCTaGCTCATTATTACGTGTGCT +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYIQSAL*LIITCA
Trigger: AGCACACGTAATAATGAGTCAGAGAGCACTTTGGAT...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCATCCAAAGTGCTCTCTaGCTCATTATTACGTGTGCT +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGIQSAL*LIITCA
Trigger: AGCACACGTAATAATGAGTCAGAGAGCACTTTGGAT...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTCCTTCTTTAGATaGCCCTCTCGTTTGCATAAG +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIQSFFR*PSRLHK
Trigger: CTTATGCAAACGAGAGGGTCATCTAAAGAAGGACTG...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR TCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACCAAGGTCACTCTGTTTaGACCCAAATCCATTTTTGG +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYQGHSV*TQIHFW
Trigger: CCAAAAATGGATTTGGGTTCAAACAGAGTGACCTTG...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375963.8
CDS-3UTR TCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATATTGGCTTGGCTTTCTaGGGTGTGCACTGTATGGGC +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNIGLAF*GVHCMG
Trigger: GCCCATACAGTGCACACCTCAGAAAGCCAAGCCAAT...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACGCTGAGGCTTTTCCCTaGGTCATATATTTACTGGAA +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYAEAFP*VIYLLE
Trigger: TTCCAGTAAATATATGACTCAGGGAAAAGCCTCAGC...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATTCAATTTTCTTACTTTaGACCTCCGGGGCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNSIFLL*TSGARP
Trigger: CGGCCTGGCCCCGGAGGTGCAAAGTAAGAAAATTGA...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTTGCCCAGTACCTAAATaGAATCACCAAAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRICPVPK*NHQRNQ
Trigger: CTGGTTCCTTTGGTGATTGCATTTAGGTACTGGGCA...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR GCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCACAGGGCGATCTATACTaGAAAGCTTTGCCCAGTACC +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSQGDLY*KALPST
Trigger: GGTACTGGGCAAAGCTTTGCAGTATAGATCGCCCTG...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR GCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTTCAACAGTCAACAGATaGTTGCCCTTCCTTCCAACT +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRISTVNR*LPFLPT
Trigger: AGTTGGAAGGAAGGGCAAGCATCTGTTGACTGTTGA...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCACTCATTATTACGTGTaGTGCCACAGACAACATGCT +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGTHYYV*CHRQHA
Trigger: AGCATGTTGTCTGTGGCAGCACACGTAATAATGAGT...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCAGATGACCCTCTCGTTTaGATAAGCTGCACACTACCG +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSDDPLV*ISCTLP
Trigger: CGGTAGTGTGCAGCTTATGCAAACGAGAGGGTCATC...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR GCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTACTGGTGGATTCCTCTaGTGGAGAAAATATAGCACC +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRITGGFL*WRKYST
Trigger: GGTGCTATATTTTCTCCAGCAGAGGAATCCACCAGT...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCAGGCCCAACCATAACTaGCCAACAGATTCTGTATTT +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGRPNHN*PTDSVF
Trigger: AAATACAGAATCTGTTGGGCAGTTATGGTTGGGCCT...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTTGGCTTTCTGAGGTGTaGACTGTATGGGCTTATCTT +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIWLSEV*TVWAYL
Trigger: AAGATAAGCCCATACAGTGCACACCTCAGAAAGCCA...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATTTCCCTCATGATTCCTaGTGGGTCCTCTTCGCTGAG +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNFPHDS*WVLFAE
Trigger: CTCAGCGAAGAGGACCCAGCAGGAATCATGAGGGAA...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTAGTGGCCATTTAGAGTaGTGCATTTTCCTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRISGHLE*CIFLPS
Trigger: TGAGGGAAGGAAAATGCAGCACTCTAAATGGCCACT...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCCTTCCATTTCTGACGTaGTTTCTAGGCTTGTTAGGT +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGLPFLT*FLGLLG
Trigger: ACCTAACAAGCCTAGAAACCACGTCAGAAATGGAAG...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGAAAGAATGTACCAAATGGTAAATTTACAGGGTCAGTCTCTTGTTCGTCTCAGACTGGCACCCTAGCATaGAAGTCTGCATCAACATCA +
Preference number: 4 (lower is better)
Translates to: RKNVPNGKFTGSVSCSSQTGTLA*KSASTS
Trigger: TGATGTTGATGCAGACTTCCATGCTAGGGTGCCAGT...CTGAGACGAACAAGAGACTGACCCTGTAAATTTACCATTTGGTACATTCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375948.2
CDS-3UTR CCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACGCTGAAGAAAGAAAATaGCCATCAGGGCAAACACAT +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYAEERK*PSGQTH
Trigger: ATGTGTTTGCCCTGATGGCCATTTTCTTTCTTCAGC...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR CCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCCCTTGTTATCTAAAGTaGCAAGTCCCTCACACTCTT +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGPCYLK*QVPHTL
Trigger: AAGAGTGTGAGGGACTTGCCACTTTAGATAACAAGG...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTATCATTTCTGATGTCTaGCCCTGTACTGAGTGGGTA +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIIISDV*PCTEWV
Trigger: TACCCACTCAGTACAGGGCCAGACATCAGAAATGAT...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACGGCAGAGGTTCTAGCTaGATTCTTTTGAAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYGRGSS*ILLKSS
Trigger: TGAAGACTTCAAAAGAATCCAGCTAGAACCTCTGCC...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR CCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACGAGGTGTGCACTGTATaGGCTTATCTTCTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYEVCTV*AYLLLL
Trigger: CAACAAAAGAAGATAAGCCCATACAGTGCACACCTC...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACTTCTCTCCAGTTGTCTaGATTACCAGTATGTTCATC +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYFSPVV*ITSMFI
Trigger: GATGAACATACTGGTAATTCAGACAACTGGAGAGAA...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACTTACATCCGAATTTTTaGAACCCAATCTGCTACAGG +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYLHPNF*NPICYR
Trigger: CCTGTAGCAGATTGGGTTTCAAAAATTCGGATGTAA...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACTATTCAAACACAGGTTaGCTATTTAGGGTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYYSNTG*LFRVLA
Trigger: GGCAAGAACCCTAAATAGTCAACCTGTGTTTGAATA...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTTTTCAGGGTGGACACTaGTGTGTTCATTTCCCATTT +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIFQGGH*CVHFPF
Trigger: AAATGGGAAATGAACACATCAGTGTCCACCCTGAAA...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACAAAAGCCTTGTGTTATaGAGGGCCAATGTGTTATAC +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYKSLVL*RANVLY
Trigger: GTATAACACATTGGCCCTTCATAACACAAGGCTTTT...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCAACTGGAAAGGCTACCTaGAGAGCCTTTAAACTGTGG +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSTGKAT*RAFKLW
Trigger: CCACAGTTTAAAGGCTCTTCAGGTAGCCTTTCCAGT...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTGCTGAGGCTTTTCCCTaGGTCATATATTTACTGGAA +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIAEAFP*VIYLLE
Trigger: TTCCAGTAAATATATGACTCAGGGAAAAGCCTCAGC...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCCACGAAATAAGGTTTTaGTGTATCTCCCATGGTCTT +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGHEIRF*CISHGL
Trigger: AAGACCATGGGAGATACAGCAAAACCTTATTTCGTG...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATGTCGTCTTACAGTTCTaGAGCCTCTTGTGTCTTGCC +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNVVLQF*SLLCLA
Trigger: GGCAAGACACAAGAGGCTGCAGAACTGTAAGACGAC...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AAGCAGGTTATAGGGCAACATACTGAAATCAAACACATTAGTATTTCAGCAGTGCACAGAAGACCACTTTaGTTTTCTCTGCACACCACC +
Preference number: 4 (lower is better)
Translates to: KQVIGQHTEIKHISISAVHRRPL*FSLHTT
Trigger: GGTGGTGTGCAGAGAAAAGCAAAGTGGTCTTCTGTG...CACTGCTGAAATACTAATGTGTTTGATTTCAGTATGTTGCCCTATAACCTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375948.2
CDS-3UTR GCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTACTCATTATTACGTGTaGTGCCACAGACAACATGCT +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRITHYYV*CHRQHA
Trigger: AGCATGTTGTCTGTGGCAGCACACGTAATAATGAGT...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTAGGCCCAACCATAACTaGCCAACAGATTCTGTATTT +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIRPNHN*PTDSVF
Trigger: AAATACAGAATCTGTTGGGCAGTTATGGTTGGGCCT...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCACACATGGTCCTTTTCTaGGGGTATTCCCATAGTTCC +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSHMVLF*GYSHSS
Trigger: GGAACTATGGGAATACCCCCAGAAAAGGACCATGTG...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCAATTTCTAGTCTTCCGTaGCTTCCTAGGTCTGGACCT +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSISSLP*LPRSGP
Trigger: AGGTCCAGACCTAGGAAGCCACGGAAGACTAGAAAT...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AAATTTACAGGGTCAGTCTCTTGTTCGTCTCAGGACCATACATATTTCAAAAATGGCAAACACATAAGGTaGCAGACCTCCTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: KFTGSVSCSSQDHTYFKNGKHIR*QTSFFR
Trigger: CCTGAAGAAGGAGGTCTGCCACCTTATGTGTTTGCC...ATTTTTGAAATATGTATGGTCCTGAGACGAACAAGAGACTGACCCTGTAAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375948.2
CDS-3UTR CCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTGCTGAAGAAAGAAAATaGCCATCAGGGCAAACACAT +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIAEERK*PSGQTH
Trigger: ATGTGTTTGCCCTGATGGCCATTTTCTTTCTTCAGC...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR CCA 90 bp TACCAAATGGTAAATTTACAGGGTCAGTCTCTTGTTCGTCTCAGGACCATACATGCTGAAGAAAGAAAATaGCCATCAGGGCAAACACAT +
Preference number: 4 (lower is better)
Translates to: YQMVNLQGQSLVRLRTIHAEERK*PSGQTH
Trigger: ATGTGTTTGCCCTGATGGCCATTTTCTTTCTTCAGC...ATGTATGGTCCTGAGACGAACAAGAGACTGACCCTGTAAATTTACCATTTGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375948.2
CDS-3UTR CCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACAATCGGCGTTTCTCTTaGTGCCTCTTCTTTTGTTAT +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYNRRFS*CLFFCY
Trigger: ATAACAAAAGAAGAGGCACCAAGAGAAACGCCGATT...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCATGGCAATGCGCTTTTTaGGCCAATCCTTCAATTCCC +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSWQCAF*ANPSIP
Trigger: GGGAATTGAAGGATTGGCCCAAAAAGCGCATTGCCA...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCAGTAGCACCAGGACCTTaGGCCAAAACTGAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSVAPGP*AKTEFL
Trigger: CAAAAACTCAGTTTTGGCCCAAGGTCCTGGTGCTAC...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCCTTCCTGTTTCTGGATaGTATACTTTATCACCCTTG +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGLPVSG*YTLSPL
Trigger: CAAGGGTGATAAAGTATACCATCCAGAAACAGGAAG...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCACTGAGTGGGTAAAGTaGTTTAGAGAGTCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGTEWVK*FRESSS
Trigger: ACTAGAAGACTCTCTAAACCACTTTACCCACTCAGT...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTGGCAGAGGTTCTAGCTaGATTCTTTTGAAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIGRGSS*ILLKSS
Trigger: TGAAGACTTCAAAAGAATCCAGCTAGAACCTCTGCC...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR CCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCACCATTTTTCTACTGGTaGCCTGAGGATCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSPFFYW*PEDLLP
Trigger: AGGGAGAAGATCCTCAGGCCACCAGTAGAAAAATGG...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCAAGCCATCTCTTACTCTaGTCTTTGTGGCTGTCATTC +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSSHLLL*SLWLSF
Trigger: GAATGACAGCCACAAAGATCAGAGTAAGAGATGGCT...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACCTTGTTAGGTCTTTATaGAACAGTCGTCTTACAGTT +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYLVRSL*NSRLTV
Trigger: AACTGTAAGACGACTGTTTCATAAAGACCTAACAAG...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AAATTTACAGGGTCAGTCTCTTGTTCGTCTCAGGACCATACATATTTCAAAAATAAGAGGACATCTGGCTaGGACATAATGGCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: KFTGSVSCSSQDHTYFKNKRTSG*DIMAGN
Trigger: GTTTCCAGCCATTATGTCTCAGCCAGATGTCCTCTT...ATTTTTGAAATATGTATGGTCCTGAGACGAACAAGAGACTGACCCTGTAAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375948.2
CDS-3UTR TCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACCAATGTCTTGAAGGTTaGAATTCCCTAGTTTGCTTA +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYQCLEG*NSLVCL
Trigger: TAAGCAAACTAGGGAATTTCAACCTTCAAGACATTG...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTTATTCAAACACAGGTTaGCTATTTAGGGTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIYSNTG*LFRVLA
Trigger: GGCAAGAACCCTAAATAGTCAACCTGTGTTTGAATA...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACATATGTTCACGAGCCTaGTCTTCTATAATTGTTGGA +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYICSRA*SSIIVG
Trigger: TCCAACAATTATAGAAGATCAGGCTCGTGAACATAT...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR TCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCAAAGTATTCCATTTTTaGGGGGTAGTCCTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGKVFHF*GVVLWK
Trigger: TTTCCAAAGGACTACCCCTCAAAAATGGAATACTTT...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCTCTGTGTACTTGTTGTaGATTTCTTTGTCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGSVYLL*ISLSSL
Trigger: CAAAGAGGACAAAGAAATTCACAACAAGTACACAGA...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTTCATACATATCTaGTATGCTTTCACACCAGGA +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIQFIHI*YAFTPG
Trigger: TCCTGGTGTGAAAGCATATCAGATATGTATGAACTG...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTTTTTTAGCCTGTCAATaGAGTCTCTCTTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIFLACQ*SLSSVS
Trigger: AGAGACTGAAGAGAGACTGCATTGACAGGCTAAAAA...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATTCTGCAGGTGTACTTTaGTGTAGGGTAGTTTCGTGG +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNSAGVL*CRVVSW
Trigger: CCACGAAACTACCCTACAGCAAAGTACACCTGCAGA...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACCTCTTTTCCTTGATATaGTTATGGGCAAATGCAATG +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYLFSLI*LWANAM
Trigger: CATTGCATTTGCCCATAAGCATATCAAGGAAAAGAG...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCAGCAACTCTTCCTCTTaGTTCTCCTTAATGTTTTTC +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGSNSSS*FSLMFF
Trigger: GAAAAACATTAAGGAGAAGCAAGAGGAAGAGTTGCT...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACAGCAACTCTTCCTCTTaGTTCTCCTTAATGTTTTTC +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYSNSSS*FSLMFF
Trigger: GAAAAACATTAAGGAGAAGCAAGAGGAAGAGTTGCT...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATCACAGAAGACCACTTTaGTTTTCTCTGCACACCACC +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNHRRPL*FSLHTT
Trigger: GGTGGTGTGCAGAGAAAAGCAAAGTGGTCTTCTGTG...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR GCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCAGATCTTCAATGGCAATaGGCTTTTTGGGCCAATCCT +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSDLQWQ*AFWANP
Trigger: AGGATTGGCCCAAAAAGCGCATTGCCATTGAAGATC...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCACATTATTACGTGTGCTaGCACAGACAACATGCTCTC +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSHYYVC*HRQHAL
Trigger: GAGAGCATGTTGTCTGTGGCAGCACACGTAATAATG...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCATGGCTTTCTGAGGTGTaGACTGTATGGGCTTATCTT +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSWLSEV*TVWAYL
Trigger: AAGATAAGCCCATACAGTGCACACCTCAGAAAGCCA...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCAAGTGGCCATTTAGAGTaGTGCATTTTCCTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSSGHLE*CIFLPS
Trigger: TGAGGGAAGGAAAATGCAGCACTCTAAATGGCCACT...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCCATACATATCTGATATaGTTTCACACCAGGATTCAG +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGHTYLI*FHTRIQ
Trigger: CTGAATCCTGGTGTGAAAGCATATCAGATATGTATG...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATGCTGGAAACAGCACATaGTCCTTTTCTGGGGGTATT +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNAGNST*SFSGGI
Trigger: AATACCCCCAGAAAAGGACCATGTGCTGTTTCCAGC...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACGGGTTGACTGTAGATTaGGTTTTTAAATGCATATGG +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYGLTVD*VFKCIW
Trigger: CCATATGCATTTAAAAACCCAATCTACAGTCAACCC...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCATAATGGCTGGAAACTaGATGTCAATGTTTACATCC +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGIMAGN*MSMFTS
Trigger: GGATGTAAACATTGACATCCAGTTTCCAGCCATTAT...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTACTGGTACTGAAGGCTaGTGTTTCACATCCAATATT +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRITGTEG*CFTSNI
Trigger: AATATTGGATGTGAAACACCAGCCTTCAGTACCAGT...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTTCTGAGTTTTCAGGGTaGACACTGATGTGTTCATTT +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRISEFSG*TLMCSF
Trigger: AAATGAACACATCAGTGTCCACCCTGAAAACTCAGA...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACGAGTTAACATCTGCTTaGATACAGTCTGAGTTTTCA +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYELTSA*IQSEFS
Trigger: TGAAAACTCAGACTGTATCCAAGCAGATGTTAACTC...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCTTCCTGTTTCTGGATaGTATACTTTATCACCCTTG +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRILPVSG*YTLSPL
Trigger: CAAGGGTGATAAAGTATACCATCCAGAAACAGGAAG...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACTTTCCTTCCTGTTTCTaGATGGTATACTTTATCACC +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYFPSCF*MVYFIT
Trigger: GGTGATAAAGTATACCATCCAGAAACAGGAAGGAAA...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACTTAGCTGTGGGATTTTaGAAGCCTTCTAAATCCAAA +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYLAVGF*KPSKSK
Trigger: TTTGGATTTAGAAGGCTTCCAAAATCCCACAGCTAA...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACGAAGAACTTCACAATTaGCACCTTTGCTGTTGTAAT +
Preference number: 4 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYEELHN*HLCCCN
Trigger: ATTACAACAGCAAAGGTGCCAATTGTGAAGTTCTTC...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCGAAGAACTTCACAATTaGCACCTTTGCTGTTGTAAT +
Preference number: 4 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGEELHN*HLCCCN
Trigger: ATTACAACAGCAAAGGTGCCAATTGTGAAGTTCTTC...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATGACAGGAATGACTGGTaGATTCCTCTGCTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNDRNDW*IPLLEK
Trigger: TTTCTCCAGCAGAGGAATCCACCAGTCATTCCTGTC...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATCCATTTTTCTACTGGTaGCCTGAGGATCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNPFFYW*PEDLLP
Trigger: AGGGAGAAGATCCTCAGGCCACCAGTAGAAAAATGG...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCTTGTTAGGTCTTTATaGAACAGTCGTCTTACAGTT +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRILVRSL*NSRLTV
Trigger: AACTGTAAGACGACTGTTTCATAAAGACCTAACAAG...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCATGTGCCTCTTTTCCTTaGTATGCTTATGGGCAAATG +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSCASFP*YAYGQM
Trigger: CATTTGCCCATAAGCATATCAAGGAAAAGAGGCACA...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAATGTCTTGAAGGTTaGAATTCCCTAGTTTGCTTA +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIQCLEG*NSLVCL
Trigger: TAAGCAAACTAGGGAATTTCAACCTTCAAGACATTG...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATCAGTCCTTCTTTAGATaGCCCTCTCGTTTGCATAAG +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNQSFFR*PSRLHK
Trigger: CTTATGCAAACGAGAGGGTCATCTAAAGAAGGACTG...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR TCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTATGTGTTATACAAACTaGTATCTACTTCCAGACCAC +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIMCYTN*YLLPDH
Trigger: GTGGTCTGGAAGTAGATATCAGTTTGTATAACACAT...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCACCTTTGGAAATCCCTTaGCAGGAATACCAAATACTC +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSPLEIP*QEYQIL
Trigger: GAGTATTTGGTATTCCTGTCAAGGGATTTCCAAAGG...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGAAAGAATGTACCAAATGGTAAATTTACAGGGTCAGTCTCTTGTTCGTCTCAGCTGTCTGTCTGGAGGTaGTATGTAAATTCAAGTATC +
Preference number: 4 (lower is better)
Translates to: RKNVPNGKFTGSVSCSSQLSVWR*YVNSSI
Trigger: GATACTTGAATTTACATATCACCTCCAGACAGACAG...CTGAGACGAACAAGAGACTGACCCTGTAAATTTACCATTTGGTACATTCTTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375948.2
CDS-3UTR GCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATAATGGCAATGCCAACTaGATTTATCTGGGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNNGNAN*IYLGGC
Trigger: ACACCCTCCCAGATAAATGCAGTTGGCATTGCCATT...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AGAAAGAATGTACCAAATGGTAAATTTACAGGGTCAGTCTCTTGTTCGTCTCAGCCTAGCATGGAAGTCTaGATCAACATCAATAAAGGA +
Preference number: 4 (lower is better)
Translates to: RKNVPNGKFTGSVSCSSQPSMEV*ININKG
Trigger: TCCTTTATTGATGTTGATGCAGACTTCCATGCTAGG...CTGAGACGAACAAGAGACTGACCCTGTAAATTTACCATTTGGTACATTCTTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375948.2
CDS-3UTR GCA 90 bp AAATTTACAGGGTCAGTCTCTTGTTCGTCTCAGGACCATACATATTTCAAAAATTGCCCAGTACCTAAATaGAATCACCAAAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: KFTGSVSCSSQDHTYFKNCPVPK*NHQRNQ
Trigger: CTGGTTCCTTTGGTGATTGCATTTAGGTACTGGGCA...ATTTTTGAAATATGTATGGTCCTGAGACGAACAAGAGACTGACCCTGTAAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375948.2
CDS-3UTR GCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTTATACTGCAAAGCTTTaGCCAGTACCTAAATGCAAT +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIYTAKL*PVPKCN
Trigger: ATTGCATTTAGGTACTGGGCAAAGCTTTGCAGTATA...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR GCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATCATTATTACGTGTGCTaGCACAGACAACATGCTCTC +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNHYYVC*HRQHAL
Trigger: GAGAGCATGTTGTCTGTGGCAGCACACGTAATAATG...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATACTGGTGGATTCCTCTaGTGGAGAAAATATAGCACC +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNTGGFL*WRKYST
Trigger: GGTGCTATATTTTCTCCAGCAGAGGAATCCACCAGT...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATAGTGGCCATTTAGAGTaGTGCATTTTCCTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNSGHLE*CIFLPS
Trigger: TGAGGGAAGGAAAATGCAGCACTCTAAATGGCCACT...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCATACATATCTGATATaGTTTCACACCAGGATTCAG +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIHTYLI*FHTRIQ
Trigger: CTGAATCCTGGTGTGAAAGCATATCAGATATGTATG...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCACTTCCATTTCTGACGTaGTTTCTAGGCTTGTTAGGT +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSLPFLT*FLGLLG
Trigger: ACCTAACAAGCCTAGAAACCACGTCAGAAATGGAAG...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTATAATGGCTGGAAACTaGATGTCAATGTTTACATCC +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIIMAGN*MSMFTS
Trigger: GGATGTAAACATTGACATCCAGTTTCCAGCCATTAT...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTGAGTTAACATCTGCTTaGATACAGTCTGAGTTTTCA +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIELTSA*IQSEFS
Trigger: TGAAAACTCAGACTGTATCCAAGCAGATGTTAACTC...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTTTAGCTGTGGGATTTTaGAAGCCTTCTAAATCCAAA +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRILAVGF*KPSKSK
Trigger: TTTGGATTTAGAAGGCTTCCAAAATCCCACAGCTAA...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCACCTTGTTATCTAAAGTaGCAAGTCCCTCACACTCTT +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSPCYLK*QVPHTL
Trigger: AAGAGTGTGAGGGACTTGCCACTTTAGATAACAAGG...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATATCATTTCTGATGTCTaGCCCTGTACTGAGTGGGTA +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNIISDV*PCTEWV
Trigger: TACCCACTCAGTACAGGGCCAGACATCAGAAATGAT...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTGAAGAACTTCACAATTaGCACCTTTGCTGTTGTAAT +
Preference number: 4 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIEELHN*HLCCCN
Trigger: ATTACAACAGCAAAGGTGCCAATTGTGAAGTTCTTC...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCAGAGGTGTGCACTGTATaGGCTTATCTTCTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSEVCTV*AYLLLL
Trigger: CAACAAAAGAAGATAAGCCCATACAGTGCACACCTC...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCATTCTCTCCAGTTGTCTaGATTACCAGTATGTTCATC +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSFSPVV*ITSMFI
Trigger: GATGAACATACTGGTAATTCAGACAACTGGAGAGAA...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATATCCAAAGTGCTCTCTaGCTCATTATTACGTGTGCT +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNIQSAL*LIITCA
Trigger: AGCACACGTAATAATGAGTCAGAGAGCACTTTGGAT...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATCAAGGTCACTCTGTTTaGACCCAAATCCATTTTTGG +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNQGHSV*TQIHFW
Trigger: CCAAAAATGGATTTGGGTTCAAACAGAGTGACCTTG...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375963.8
CDS-3UTR TCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATGATGTTTCTCAGACCTaGATGTTTTCTGAGGACTCT +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNDVSQT*MFSEDS
Trigger: AGAGTCCTCAGAAAACATTCAGGTCTGAGAAACATC...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATCCTTTGGAAATCCCTTaGCAGGAATACCAAATACTC +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNPLEIP*QEYQIL
Trigger: GAGTATTTGGTATTCCTGTCAAGGGATTTCCAAAGG...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AAATTTACAGGGTCAGTCTCTTGTTCGTCTCAGGACCATACATATTTCAAAAATGAAAGTAAGTTACAGTaGACCAAATGCTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: KFTGSVSCSSQDHTYFKNESKLQ*TKCFPQ
Trigger: CTGTGGGAAGCATTTGGTTCACTGTAACTTACTTTC...ATTTTTGAAATATGTATGGTCCTGAGACGAACAAGAGACTGACCCTGTAAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375948.2
CDS-3UTR GCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCATTTTTAGCCTGTCAATaGAGTCTCTCTTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSFLACQ*SLSSVS
Trigger: AGAGACTGAAGAGAGACTGCATTGACAGGCTAAAAA...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCACCTAGCATGGAAGTCTaGATCAACATCAATAAAGGA +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSPSMEV*ININKG
Trigger: TCCTTTATTGATGTTGATGCAGACTTCCATGCTAGG...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR GCA 90 bp AAATTTACAGGGTCAGTCTCTTGTTCGTCTCAGGACCATACATATTTCAAAAATCCAAGGGCAGTTAAATaGTTTGTTGTCAGACAAGCA +
Preference number: 4 (lower is better)
Translates to: KFTGSVSCSSQDHTYFKNPRAVK*FVVRQA
Trigger: TGCTTGTCTGACAACAAAGCATTTAACTGCCCTTGG...ATTTTTGAAATATGTATGGTCCTGAGACGAACAAGAGACTGACCCTGTAAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375948.2
CDS-3UTR GCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATCCAAGGGCAGTTAAATaGTTTGTTGTCAGACAAGCA +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNPRAVK*FVVRQA
Trigger: TGCTTGTCTGACAACAAAGCATTTAACTGCCCTTGG...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR CCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATATGCATATGGATTGCTaGAAACAGCACATGGTCCTT +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNMHMDC*KQHMVL
Trigger: AAGGACCATGTGCTGTTTCCAGCAATCCATATGCAT...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCAAATCGGCGTTTCTCTTaGTGCCTCTTCTTTTGTTAT +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSNRRFS*CLFFCY
Trigger: ATAACAAAAGAAGAGGCACCAAGAGAAACGCCGATT...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCAACTGGTACTGAAGGCTaGTGTTTCACATCCAATATT +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSTGTEG*CFTSNI
Trigger: AATATTGGATGTGAAACACCAGCCTTCAGTACCAGT...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCAATGTGTTATACAAACTaGTATCTACTTCCAGACCAC +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSMCYTN*YLLPDH
Trigger: GTGGTCTGGAAGTAGATATCAGTTTGTATAACACAT...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATAAAAGCCTTGTGTTATaGAGGGCCAATGTGTTATAC +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNKSLVL*RANVLY
Trigger: GTATAACACATTGGCCCTTCATAACACAAGGCTTTT...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCATCTGTGTACTTGTTGTaGATTTCTTTGTCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSSVYLL*ISLSSL
Trigger: CAAAGAGGACAAAGAAATTCACAACAAGTACACAGA...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATCAGTTCATACATATCTaGTATGCTTTCACACCAGGA +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNQFIHI*YAFTPG
Trigger: TCCTGGTGTGAAAGCATATCAGATATGTATGAACTG...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCACTCTTTTCCTTGATATaGTTATGGGCAAATGCAATG +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSLFSLI*LWANAM
Trigger: CATTGCATTTGCCCATAAGCATATCAAGGAAAAGAG...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCATATACTGCAAAGCTTTaGCCAGTACCTAAATGCAAT +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSYTAKL*PVPKCN
Trigger: ATTGCATTTAGGTACTGGGCAAAGCTTTGCAGTATA...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR CCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCAGGGTTGACTGTAGATTaGGTTTTTAAATGCATATGG +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSGLTVD*VFKCIW
Trigger: CCATATGCATTTAAAAACCCAATCTACAGTCAACCC...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATGTACCACTTTGTCAATaGCAATGCCAACTGCATTTA +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNVPLCQ*QCQLHL
Trigger: TAAATGCAGTTGGCATTGCCATTGACAAAGTGGTAC...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AAGCAGGTTATAGGGCAACATACTGAAATCAAACACATTAGTATTTCAGCAGTGATAATGGCTGGAAACTaGATGTCAATGTTTACATCC +
Preference number: 4 (lower is better)
Translates to: KQVIGQHTEIKHISISAVIMAGN*MSMFTS
Trigger: GGATGTAAACATTGACATCCAGTTTCCAGCCATTAT...CACTGCTGAAATACTAATGTGTTTGATTTCAGTATGTTGCCCTATAACCTGCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375948.2
CDS-3UTR CCA 90 bp AAATTTACAGGGTCAGTCTCTTGTTCGTCTCAGGACCATACATATTTCAAAAATCTGAGACATAATGGCTaGAAACTGGATGTCAATGTT +
Preference number: 4 (lower is better)
Translates to: KFTGSVSCSSQDHTYFKNLRHNG*KLDVNV
Trigger: AACATTGACATCCAGTTTCCAGCCATTATGTCTCAG...ATTTTTGAAATATGTATGGTCCTGAGACGAACAAGAGACTGACCCTGTAAATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375948.2
CDS-3UTR CCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATACTGGTACTGAAGGCTaGTGTTTCACATCCAATATT +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNTGTEG*CFTSNI
Trigger: AATATTGGATGTGAAACACCAGCCTTCAGTACCAGT...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCACTCTTTAAGAGTAAGTaGCTGTACCTTACAGGTATT +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSLFKSK*LYLTGI
Trigger: AATACCTGTAAGGTACAGCCACTTACTCTTAAAGAG...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATTCTGAGTTTTCAGGGTaGACACTGATGTGTTCATTT +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNSEFSG*TLMCSF
Trigger: AAATGAACACATCAGTGTCCACCCTGAAAACTCAGA...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCAGCTCAATTTAGTTCCTaGAAAGTCCTGTCTTATGAA +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSAQFSS*KVLSYE
Trigger: TTCATAAGACAGGACTTTCCAGGAACTAAATTGAGC...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375963.8
CDS-3UTR CCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCAAGAGCCTTTAAACTGTaGGCATTCCTTTTTAATGTG +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSRAFKL*AFLFNV
Trigger: CACATTAAAAAGGAATGCCCACAGTTTAAAGGCTCT...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATCTTGTTAGGTCTTTATaGAACAGTCGTCTTACAGTT +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNLVRSL*NSRLTV
Trigger: AACTGTAAGACGACTGTTTCATAAAGACCTAACAAG...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATCAATGTCTTGAAGGTTaGAATTCCCTAGTTTGCTTA +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNQCLEG*NSLVCL
Trigger: TAAGCAAACTAGGGAATTTCAACCTTCAAGACATTG...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATAAAGTATTCCATTTTTaGGGGGTAGTCCTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNKVFHF*GVVLWK
Trigger: TTTCCAAAGGACTACCCCTCAAAAATGGAATACTTT...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR TCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATTCTGTGTACTTGTTGTaGATTTCTTTGTCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNSVYLL*ISLSSL
Trigger: CAAAGAGGACAAAGAAATTCACAACAAGTACACAGA...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATAGCAACTCTTCCTCTTaGTTCTCCTTAATGTTTTTC +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNSNSSS*FSLMFF
Trigger: GAAAAACATTAAGGAGAAGCAAGAGGAAGAGTTGCT...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AAATTTACAGGGTCAGTCTCTTGTTCGTCTCAGGACCATACATATTTCAAAAATTATACTGCAAAGCTTTaGCCAGTACCTAAATGCAAT +
Preference number: 4 (lower is better)
Translates to: KFTGSVSCSSQDHTYFKNYTAKL*PVPKCN
Trigger: ATTGCATTTAGGTACTGGGCAAAGCTTTGCAGTATA...ATTTTTGAAATATGTATGGTCCTGAGACGAACAAGAGACTGACCCTGTAAATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375948.2
CDS-3UTR CCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATATAATGGCTGGAAACTaGATGTCAATGTTTACATCC +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNIMAGN*MSMFTS
Trigger: GGATGTAAACATTGACATCCAGTTTCCAGCCATTAT...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATTTTCCTTCCTGTTTCTaGATGGTATACTTTATCACC +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNFPSCF*MVYFIT
Trigger: GGTGATAAAGTATACCATCCAGAAACAGGAAGGAAA...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATAGAGCCTTTAAACTGTaGGCATTCCTTTTTAATGTG +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNRAFKL*AFLFNV
Trigger: CACATTAAAAAGGAATGCCCACAGTTTAAAGGCTCT...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCAAAATCCTTAAATCTATaGGGATGTGTGGTAGATAAG +
Preference number: 4 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSKSLNL*GCVVDK
Trigger: CTTATCTACCACACATCCCCATAGATTTAAGGATTT...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR GCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATCATTCCTTTTTAATGTaGCCTTCTCTTCCACAAATA +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNHSFLM*PSLPQI
Trigger: TATTTGTGGAAGAGAAGGGCACATTAAAAAGGAATG...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CCA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATAAATCCTTAAATCTATaGGGATGTGTGGTAGATAAG +
Preference number: 4 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNKSLNL*GCVVDK
Trigger: CTTATCTACCACACATCCCCATAGATTTAAGGATTT...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS CCA 90 bp AAACCAACTGGAGAATCAGCCCGGAGGCGAGTCTGGCAGGGACGTTaGGAGAAGGCGCCCAAGAGCACTCACCACCTTCGCCGCGGTCCC +
Preference number: 5 (lower is better)
Translates to: KPTGESARRRVWQGR*EKAPKSTHHLRRGP
Trigger: GGGACCGCGGCGAAGGTGGTGAGTGCTCTTGGGCGCCTTCTCCCAACGTCCCTGCCAGACTCGCCTCCGGGCTGATTCTCCAGTTGGTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CCA 90 bp TCCGGGGCCAGGCCGGACAGCTACTCTGGAGTCCAGGAAACCAACTaGAGAATCAGCCCGGAGGCGAGTCTGGCAGGGACGTTGGGAGAA +
Preference number: 5 (lower is better)
Translates to: SGARPDSYSGVQETN*RISPEASLAGTLGE
Trigger: TTCTCCCAACGTCCCTGCCAGACTCGCCTCCGGGCTGATTCTCCAGTTGGTTTCCTGGACTCCAGAGTAGCTGTCCGGCCTGGCCCCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CCA 90 bp CTGGAGTCCAGGAAACCAACTGGAGAATCAGCCCGGAGGCGAGTCTaGCAGGGACGTTGGGAGAAGGCGCCCAAGAGCACTCACCACCTT +
Preference number: 5 (lower is better)
Translates to: LESRKPTGESARRRV*QGRWEKAPKSTHHL
Trigger: AAGGTGGTGAGTGCTCTTGGGCGCCTTCTCCCAACGTCCCTGCCAGACTCGCCTCCGGGCTGATTCTCCAGTTGGTTTCCTGGACTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS TCA 90 bp TCCACTCTTCTGCCCTGGGAAGCCCCATCACTGAATTGGCTGGACTaGATTTCAGGGGCGAGAGGGAGGCACCAGGAGGAGACACCACTT +
Preference number: 5 (lower is better)
Translates to: STLLPWEAPSLNWLD*ISGARGRHQEETPL
Trigger: AAGTGGTGTCTCCTCCTGGTGCCTCCCTCTCGCCCCTGAAATTCAGTCCAGCCAATTCAGTGATGGGGCTTCCCAGGGCAGAAGAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469004.1
CDS GCA 90 bp TTCTACTGGTGGCCTGAGGATCTTCTCCCTCCCCAGGTCAGCAGCTaGCCGCATTGGCTTGGCTTTCTGAGGTGTGCACTGTATGGGCTT +
Preference number: 5 (lower is better)
Translates to: FYWWPEDLLPPQVSS*PHWLGFLRCALYGL
Trigger: AAGCCCATACAGTGCACACCTCAGAAAGCCAAGCCAATGCGGGCAGCTGCTGACCTGGGGAGGGAGAAGATCCTCAGGCCACCAGTAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS TCA 90 bp TTCTCCCTCCCCAGGTCAGCAGCTGCCCGCATTGGCTTGGCTTTCTaGGGTGTGCACTGTATGGGCTTATCTTCTTTTGTTGACACCTCC +
Preference number: 5 (lower is better)
Translates to: FSLPRSAAARIGLAF*GVHCMGLSSFVDTS
Trigger: GGAGGTGTCAACAAAAGAAGATAAGCCCATACAGTGCACACCTCAGAAAGCCAAGCCAATGCGGGCAGCTGCTGACCTGGGGAGGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS GCA 90 bp TCCCCAGGTCAGCAGCTGCCCGCATTGGCTTGGCTTTCTGAGGTGTaGACTGTATGGGCTTATCTTCTTTTGTTGACACCTCCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: SPGQQLPALAWLSEV*TVWAYLLLLTPPFL
Trigger: CAGAAAGGGAGGTGTCAACAAAAGAAGATAAGCCCATACAGTGCACACCTCAGAAAGCCAAGCCAATGCGGGCAGCTGCTGACCTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATGCAGCCTCTTGTGTCTaGCCACCTATAACCATCTTC +
Preference number: 5 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDAASCV*PPITIF
Trigger: GAAGATGGTTATAGGTGGCAAGACACAAGAGGCTGC...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATCTGGACCTCTGCTTCTaGTTTTCAGGACTTCCTGCT +
Preference number: 5 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDLDLCF*FSGLPA
Trigger: AGCAGGAAGTCCTGAAAACAAGAAGCAGAGGTCCAG...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATGTTCTCAGGGTATCTTaGGTTCAGGGCATCTTCCTG +
Preference number: 5 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDVLRVS*VQGIFL
Trigger: CAGGAAGATGCCCTGAACCAAAGATACCCTGAGAAC...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCCTGGACCTCTGCTTCTaGTTTTCAGGACTTCCTGCT +
Preference number: 5 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLLDLCF*FSGLPA
Trigger: AGCAGGAAGTCCTGAAAACAAGAAGCAGAGGTCCAG...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATACACAGAAGACCACTTaGCTTTTCTCTGCACACCAC +
Preference number: 5 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDTQKTT*LFSAHH
Trigger: GTGGTGTGCAGAGAAAAGCAAAGTGGTCTTCTGTGT...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR CAA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCAGTCTGGCAGGGACGTaGGGAGAAGGCGCCCAAGAG +
Preference number: 5 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGSLAGT*GEGAQE
Trigger: CTCTTGGGCGCCTTCTCCCAACGTCCCTGCCAGACT...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCCTAGCAGCTCCTTCGTaGAAAGTACAGACTCATCGA +
Preference number: 5 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLLAAPS*KVQTHR
Trigger: TCGATGAGTCTGTACTTTCAACGAAGGAGCTGCTAG...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATTGGGCTTATCTTCTTTaGTTGACACCTCCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDWAYLL*LTPPFL
Trigger: CAGAAAGGGAGGTGTCAACAAAAGAAGATAAGCCCA...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS CCA 90 bp CAGCAGCTGCCCGCATTGGCTTGGCTTTCTGAGGTGTGCACTGTATaGGCTTATCTTCTTTTGTTGACACCTCCCTTTCTGTGTACTTGT +
Preference number: 5 (lower is better)
Translates to: QQLPALAWLSEVCTV*AYLLLLTPPFLCTC
Trigger: ACAAGTACACAGAAAGGGAGGTGTCAACAAAAGAAGATAAGCCCATACAGTGCACACCTCAGAAAGCCAAGCCAATGCGGGCAGCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATATTCTAGGTCCAGGTTaGAATTCTCTCCAGTTGTCT +
Preference number: 5 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDILGPG*NSLQLS
Trigger: AGACAACTGGAGAGAATTCAAACCTGGACCTAGAAT...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATCCATCAAGATCAGCCTaGTTATCTAAAGTGGCAAGT +
Preference number: 5 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDPSRSA*LSKVAS
Trigger: ACTTGCCACTTTAGATAACAAGGCTGATCTTGATGG...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCTCTAGCTGGATTCTTTaGAAGTCTTCAGGACAGTCC +
Preference number: 5 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLSSWIL*KSSGQS
Trigger: GGACTGTCCTGAAGACTTCAAAAGAATCCAGCTAGA...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR CAA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATGCTTATCTTCTTTTGTaGACACCTCCCTTTCTGTGT +
Preference number: 5 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDAYLLL*TPPFLC
Trigger: ACACAGAAAGGGAGGTGTCAACAAAAGAAGATAAGC...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACCAGCAGCTGCCCGCATaGGCTTGGCTTTCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYQQLPA*AWLSEV
Trigger: CACCTCAGAAAGCCAAGCCAATGCGGGCAGCTGCTG...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS GCA 90 bp GAAAGTACAGACTCATCGATCACAGGGCCTTCCAAGTCTCCATCCTaGTCATTTTCCTCATTTCTAGTCTTCCGTGGCTTCCTAGGTCTG +
Preference number: 5 (lower is better)
Translates to: ESTDSSITGPSKSPS*SFSSFLVFRGFLGL
Trigger: CAGACCTAGGAAGCCACGGAAGACTAGAAATGAGGAAAATGAGCAGGATGGAGACTTGGAAGGCCCTGTGATCGATGAGTCTGTACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375947.1
ENST00000375960.6
ENST00000375963.8
CDS GCA 90 bp CTTTTTAGCCTGTCAATGCAGTCTCTCTTCAGTCTCTCCTCAGCCTaGTGTAAGCCTAGCAGCTCCTTCGTTGAAAGTACAGACTCATCG +
Preference number: 5 (lower is better)
Translates to: LFSLSMQSLFSLSSA*CKPSSSFVESTDSS
Trigger: CGATGAGTCTGTACTTTCAACGAAGGAGCTGCTAGGCTTACAGCAGGCTGAGGAGAGACTGAAGAGAGACTGCATTGACAGGCTAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375947.1
ENST00000375960.6
ENST00000375963.8
CDS CCA 90 bp CCTCTGCTGAAGAAAGAAAATGGCCATCAGGGCAAACACATAAGGTaGCAGACCTCCTTCTTCAGGGCGATCTATACTGCAAAGCTTTGC +
Preference number: 5 (lower is better)
Translates to: PLLKKENGHQGKHIR*QTSFFRAIYTAKLC
Trigger: GCAAAGCTTTGCAGTATAGATCGCCCTGAAGAAGGAGGTCTGCCACCTTATGTGTTTGCCCTGATGGCCATTTTCTTTCTTCAGCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375948.2
ENST00000375963.8
CDS-3UTR CAA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCATTCTAGGTCCAGGTTaGAATTCTCTCCAGTTGTCT +
Preference number: 5 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLILGPG*NSLQLS
Trigger: AGACAACTGGAGAGAATTCAAACCTGGACCTAGAAT...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATACGTGGTTTCTAGGCTaGTTAGGTCTTTATGAAACA +
Preference number: 5 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDTWFLG*LGLYET
Trigger: TGTTTCATAAAGACCTAACAAGCCTAGAAACCACGT...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATTCAAGGTCACTCTGTTaGAACCCAAATCCATTTTTG +
Preference number: 5 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDSRSLC*NPNPFL
Trigger: CAAAAATGGATTTGGGTTCAAACAGAGTGACCTTGA...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375963.8
CDS-3UTR CAA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCAAGCAGATAAAAGCCTaGTGTTATGAAGGGCCAATG +
Preference number: 5 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLKQIKA*CYEGPM
Trigger: CATTGGCCCTTCATAACACAAGGCTTTTATCTGCTT...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATTCCTTTGGAAATCCCTaGACAGGAATACCAAATACT +
Preference number: 5 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDSFGNP*TGIPNT
Trigger: AGTATTTGGTATTCCTGTCAAGGGATTTCCAAAGGA...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCAAGTCTGGCAGGGACGTaGGGAGAAGGCGCCCAAGAG +
Preference number: 5 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSSLAGT*GEGAQE
Trigger: CTCTTGGGCGCCTTCTCCCAACGTCCCTGCCAGACT...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCGAACAATCTGGTAACTaGTGTTGGAACACATTTTCC +
Preference number: 5 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLEQSGN*CWNTFS
Trigger: GGAAAATGTGTTCCAACACAAGTTACCAGATTGTTC...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCTCAAGGTCACTCTGTTaGAACCCAAATCCATTTTTG +
Preference number: 5 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLSRSLC*NPNPFL
Trigger: CAAAAATGGATTTGGGTTCAAACAGAGTGACCTTGA...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375963.8
CDS-3UTR CAA 90 bp AGGGCTCCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATGGCAAACAGGACTACTaGTTTTCCTTACTTCATTTT +
Preference number: 5 (lower is better)
Translates to: RAPVRPRMTPATLVTGRDGKQDY*FSLLHF
Trigger: AAAATGAAGTAAGGAAAACAAGTAGTCCTGTTTGCC...ATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGGAGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS TCA 90 bp CCTGCTTCCATTTCTGACGTGGTTTCTAGGCTTGTTAGGTCTTTATaGAACAGTCGTCTTACAGTTCTGCAGCCTCTTGTGTCTTGCCAC +
Preference number: 5 (lower is better)
Translates to: PASISDVVSRLVRSL*NSRLTVLQPLVSCH
Trigger: GTGGCAAGACACAAGAGGCTGCAGAACTGTAAGACGACTGTTTCATAAAGACCTAACAAGCCTAGAAACCACGTCAGAAATGGAAGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS TCA 90 bp TTCCCTCATGATTCCTGCTGGGTCCTCTTCGCTGAGGCTTTTCCCTaGGTCATATATTTACTGGAAAGGCTACCTGAAGAGCCTTTAAAC +
Preference number: 5 (lower is better)
Translates to: FPHDSCWVLFAEAFP*VIYLLERLPEEPLN
Trigger: GTTTAAAGGCTCTTCAGGTAGCCTTTCCAGTAAATATATGACTCAGGGAAAAGCCTCAGCGAAGAGGACCCAGCAGGAATCATGAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS CCA 90 bp CCAAGTTCTCATTGTGTAAGCCAAATTCCTGTACCACTTTGTCAATaGCAATGCCAACTGCATTTATCTGGGAGGGTGTTGGTGGGGGTA +
Preference number: 5 (lower is better)
Translates to: PSSHCVSQIPVPLCQ*QCQLHLSGRVLVGV
Trigger: TACCCCCACCAACACCCTCCCAGATAAATGCAGTTGGCATTGCCATTGACAAAGTGGTACAGGAATTTGGCTTACACAATGAGAACTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375947.1
ENST00000375960.6
ENST00000375963.8
CDS CCA 90 bp CACTTTACACAGAAGACCACTTTGCTTTTCTCTGCACACCACCACTaGCACCCTAGCATGGAAGTCTGCATCAACATCAATAAAGGAGTC +
Preference number: 5 (lower is better)
Translates to: HFTQKTTLLFSAHHH*HPSMEVCININKGV
Trigger: GACTCCTTTATTGATGTTGATGCAGACTTCCATGCTAGGGTGCCAGTGGTGGTGTGCAGAGAAAAGCAAAGTGGTCTTCTGTGTAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375948.2
ENST00000375963.8
CDS-3UTR CAA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATAGTCTGGCAGGGACGTaGGGAGAAGGCGCCCAAGAG +
Preference number: 5 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNSLAGT*GEGAQE
Trigger: CTCTTGGGCGCCTTCTCCCAACGTCCCTGCCAGACT...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp CCAGTCAGACCCAGAATGACACCAGCCACACTTGTGACTGGCAGAGATAACCTCTTGAATTCTCTCCAGTaGTCTGAATTACCAGTATGT +
Preference number: 5 (lower is better)
Translates to: PVRPRMTPATLVTGRDNLLNSLQ*SELPVC
Trigger: ACATACTGGTAATTCAGACAACTGGAGAGAATTCAA...GAGGTTATCTCTGCCAGTCACAAGTGTGGCTGGTGTCATTCTGGGTCTGACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS TCA 90 bp TCATTATTACGTGTGCTGCCACAGACAACATGCTCTCCACGTTTCTaGTCAACAGTCAACAGATGCTTGCCCTTCCTTCCAACTTTCTCT +
Preference number: 5 (lower is better)
Translates to: SLLRVLPQTTCSPRF*STVNRCLPFLPTFS
Trigger: AGAGAAAGTTGGAAGGAAGGGCAAGCATCTGTTGACTGTTGATCAGAAACGTGGAGAGCATGTTGTCTGTGGCAGCACACGTAATAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS TCA 90 bp TCTAGCTGGATTCTTTTGAAGTCTTCAGGACAGTCCTTCTTTAGATaGCCCTCTCGTTTGCATAAGCTGCACACTACCGTAGGAGACTTG +
Preference number: 5 (lower is better)
Translates to: SSWILLKSSGQSFFR*PSRLHKLHTTVGDL
Trigger: CAAGTCTCCTACGGTAGTGTGCAGCTTATGCAAACGAGAGGGTCATCTAAAGAAGGACTGTCCTGAAGACTTCAAAAGAATCCAGCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS GCA 90 bp GGAAGCCTTCTAAATCCAAAGTGCTCTCTGACTCATTATTACGTGTaGTGCCACAGACAACATGCTCTCCACGTTTCTGATCAACAGTCA +
Preference number: 5 (lower is better)
Translates to: GSLLNPKCSLTHYYV*CHRQHALHVSDQQS
Trigger: TGACTGTTGATCAGAAACGTGGAGAGCATGTTGTCTGTGGCAGCACACGTAATAATGAGTCAGAGAGCACTTTGGATTTAGAAGGCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTTTCAATTTTCTTACTTaGCACCTCCGGGGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIFNFLT*HLRGQA
Trigger: GGCCTGGCCCCGGAGGTGCAAAGTAAGAAAATTGAA...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCTTGGTGCCTCTTCTTTaGTTATGCCTGTGTCCCCTG +
Preference number: 5 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGLVPLL*LCLCPL
Trigger: CAGGGGACACAGGCATAACAAAAGAAGAGGCACCAA...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATCAGCAGCTGCCCGCATaGGCTTGGCTTTCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNQQLPA*AWLSEV
Trigger: CACCTCAGAAAGCCAAGCCAATGCGGGCAGCTGCTG...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS TCA 90 bp AAAACTTGGGTGTTAATGGTGGCAGAGGTTCTAGCTGGATTCTTTTaGAGTCTTCAGGACAGTCCTTCTTTAGATGACCCTCTCGTTTGC +
Preference number: 5 (lower is better)
Translates to: KTWVLMVAEVLAGFF*SLQDSPSLDDPLVC
Trigger: GCAAACGAGAGGGTCATCTAAAGAAGGACTGTCCTGAAGACTTCAAAAGAATCCAGCTAGAACCTCTGCCACCATTAACACCCAAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS GCA 90 bp AGCCTTCTAAATCCAAAGTGCTCTCTGACTCATTATTACGTGTGCTaGCACAGACAACATGCTCTCCACGTTTCTGATCAACAGTCAACA +
Preference number: 5 (lower is better)
Translates to: SLLNPKCSLTHYYVC*HRQHALHVSDQQST
Trigger: TGTTGACTGTTGATCAGAAACGTGGAGAGCATGTTGTCTGTGGCAGCACACGTAATAATGAGTCAGAGAGCACTTTGGATTTAGAAGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CCA 90 bp CTGATCTTTGTGGCTGTCATTCATCCAAGCGGGTTGACTGTAGATTaGGTTTTTAAATGCATATGGATTGCTGGAAACAGCACATGGTCC +
Preference number: 5 (lower is better)
Translates to: LIFVAVIHPSGLTVD*VFKCIWIAGNSTWS
Trigger: GGACCATGTGCTGTTTCCAGCAATCCATATGCATTTAAAAACCCAATCTACAGTCAACCCGCTTGGATGAATGACAGCCACAAAGATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CCA 90 bp AGACCACTTTGCTTTTCTCTGCACACCACCACTGGCACCCTAGCATaGAAGTCTGCATCAACATCAATAAAGGAGTCACTGTTCTTTAAA +
Preference number: 5 (lower is better)
Translates to: RPLCFSLHTTTGTLA*KSASTSIKESLFFK
Trigger: TTTAAAGAACAGTGACTCCTTTATTGATGTTGATGCAGACTTCCATGCTAGGGTGCCAGTGGTGGTGTGCAGAGAAAAGCAAAGTGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375948.2
ENST00000375963.8
CDS CCA 90 bp TCTTCATCAGAGGGAATCATTTCTGATGTCTGGCCCTGTACTGAGTaGGTAAAGTGGTTTAGAGAGTCTTCTAGTTCCTCAGTACCTTCT +
Preference number: 5 (lower is better)
Translates to: SSSEGIISDVWPCTE*VKWFRESSSSSVPS
Trigger: AGAAGGTACTGAGGAACTAGAAGACTCTCTAAACCACTTTACCCACTCAGTACAGGGCCAGACATCAGAAATGATTCCCTCTGATGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTGCAGCCTCTTGTGTCTaGCCACCTATAACCATCTTC +
Preference number: 5 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIAASCV*PPITIF
Trigger: GAAGATGGTTATAGGTGGCAAGACACAAGAGGCTGC...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTTCTGCAGCCTCTaGTGTCTTGCCACCTATAAC +
Preference number: 5 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIQFCSL*CLATYN
Trigger: GTTATAGGTGGCAAGACACAAGAGGCTGCAGAACTG...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCCTAGCAGCTCCTTCGTaGAAAGTACAGACTCATCGA +
Preference number: 5 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGLAAPS*KVQTHR
Trigger: TCGATGAGTCTGTACTTTCAACGAAGGAGCTGCTAG...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCCCAAAGGAACCAGCTTaGGTTCTAGTTTTCCAAGGG +
Preference number: 5 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGPKEPA*VLVFQG
Trigger: CCCTTGGAAAACTAGAACCAAAGCTGGTTCCTTTGG...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR CAA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACCCAAAGGAACCAGCTTaGGTTCTAGTTTTCCAAGGG +
Preference number: 5 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYPKEPA*VLVFQG
Trigger: CCCTTGGAAAACTAGAACCAAAGCTGGTTCCTTTGG...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR CAA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACACAGTCAACAGATGCTaGCCCTTCCTTCCAACTTTC +
Preference number: 5 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYTVNRC*PFLPTF
Trigger: GAAAGTTGGAAGGAAGGGCAAGCATCTGTTGACTGT...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCACAGTCAACAGATGCTaGCCCTTCCTTCCAACTTTC +
Preference number: 5 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGTVNRC*PFLPTF
Trigger: GAAAGTTGGAAGGAAGGGCAAGCATCTGTTGACTGT...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACAACCCAAATCCATTTTaGGAGGAGCCAAACAGGCTC +
Preference number: 5 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYNPNPF*EEPNRL
Trigger: GAGCCTGTTTGGCTCCTCCAAAAATGGATTTGGGTT...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375963.8
CDS-3UTR CAA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTGTTCTCAGGGTATCTTaGGTTCAGGGCATCTTCCTG +
Preference number: 5 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIVLRVS*VQGIFL
Trigger: CAGGAAGATGCCCTGAACCAAAGATACCCTGAGAAC...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp TACCAAATGGTAAATTTACAGGGTCAGTCTCTTGTTCGTCTCAGGACCATACATACACAGAAGACCACTTaGCTTTTCTCTGCACACCAC +
Preference number: 5 (lower is better)
Translates to: YQMVNLQGQSLVRLRTIHTQKTT*LFSAHH
Trigger: GTGGTGTGCAGAGAAAAGCAAAGTGGTCTTCTGTGT...ATGTATGGTCCTGAGACGAACAAGAGACTGACCCTGTAAATTTACCATTTGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375948.2
CDS-3UTR CAA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTATGGCAATGCGCTTTTaGGGCCAATCCTTCAATTCC +
Preference number: 5 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIMAMRF*GQSFNS
Trigger: GGAATTGAAGGATTGGCCCAAAAAGCGCATTGCCAT...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTACAGTCAACAGATGCTaGCCCTTCCTTCCAACTTTC +
Preference number: 5 (lower is better)
Translates to: GSTAVAVHTYLICFHTRITVNRC*PFLPTF
Trigger: GAAAGTTGGAAGGAAGGGCAAGCATCTGTTGACTGT...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCACTACCGTAGGAGACTaGCCTTTGGTGAAGATAAGT +
Preference number: 5 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGTTVGD*PLVKIS
Trigger: ACTTATCTTCACCAAAGGCAAGTCTCCTACGGTAGT...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR CAA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACACTACCGTAGGAGACTaGCCTTTGGTGAAGATAAGT +
Preference number: 5 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYTTVGD*PLVKIS
Trigger: ACTTATCTTCACCAAAGGCAAGTCTCCTACGGTAGT...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR CAA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCTCTAGCTGGATTCTTTaGAAGTCTTCAGGACAGTCC +
Preference number: 5 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGSSWIL*KSSGQS
Trigger: GGACTGTCCTGAAGACTTCAAAAGAATCCAGCTAGA...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR CAA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACTGGGCTTATCTTCTTTaGTTGACACCTCCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYWAYLL*LTPPFL
Trigger: CAGAAAGGGAGGTGTCAACAAAAGAAGATAAGCCCA...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCTGGGCTTATCTTCTTTaGTTGACACCTCCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGWAYLL*LTPPFL
Trigger: CAGAAAGGGAGGTGTCAACAAAAGAAGATAAGCCCA...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACACACAGTCCAATCCCTaGCCTTTGGTGAAGATAAGT +
Preference number: 5 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYTQSNP*PLVKIS
Trigger: ACTTATCTTCACCAAAGGCAAGGGATTGGACTGTGT...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375960.6
CDS CCA 90 bp TCATCAGAGTTAACATCTGCTTGGATACAGTCTGAGTTTTCAGGGTaGACACTGATGTGTTCATTTCCCATTTCTTCTTTTGGTGGGCTT +
Preference number: 5 (lower is better)
Translates to: SSELTSAWIQSEFSG*TLMCSFPISSFGGL
Trigger: AAGCCCACCAAAAGAAGAAATGGGAAATGAACACATCAGTGTCCACCCTGAAAACTCAGACTGTATCCAAGCAGATGTTAACTCTGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATTTCAATTTTCTTACTTaGCACCTCCGGGGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNFNFLT*HLRGQA
Trigger: GGCCTGGCCCCGGAGGTGCAAAGTAAGAAAATTGAA...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCTCACGAAATAAGGTTTaGCTGTATCTCCCATGGTCT +
Preference number: 5 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGSRNKV*LYLPWS
Trigger: AGACCATGGGAGATACAGCAAAACCTTATTTCGTGA...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACTCACGAAATAAGGTTTaGCTGTATCTCCCATGGTCT +
Preference number: 5 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYSRNKV*LYLPWS
Trigger: AGACCATGGGAGATACAGCAAAACCTTATTTCGTGA...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCACAGTTCTGCAGCCTCTaGTGTCTTGCCACCTATAAC +
Preference number: 5 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSQFCSL*CLATYN
Trigger: GTTATAGGTGGCAAGACACAAGAGGCTGCAGAACTG...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCAATTCCTGTACCACTTaGTCAATGGCAATGCCAACT +
Preference number: 5 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGNSCTT*SMAMPT
Trigger: AGTTGGCATTGCCATTGACAAAGTGGTACAGGAATT...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCATTGGTGCCTCTTCTTTaGTTATGCCTGTGTCCCCTG +
Preference number: 5 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSLVPLL*LCLCPL
Trigger: CAGGGGACACAGGCATAACAAAAGAAGAGGCACCAA...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACGTAGGAGACTTGCCTTaGGTGAAGATAAGTTTACTG +
Preference number: 5 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYVGDLP*VKISLL
Trigger: CAGTAAACTTATCTTCACCAAAGGCAAGTCTCCTAC...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR CAA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCAAGCAGATAAAAGCCTaGTGTTATGAAGGGCCAATG +
Preference number: 5 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGKQIKA*CYEGPM
Trigger: CATTGGCCCTTCATAACACAAGGCTTTTATCTGCTT...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCAGTTCTCAGGGTATCTTaGGTTCAGGGCATCTTCCTG +
Preference number: 5 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSVLRVS*VQGIFL
Trigger: CAGGAAGATGCCCTGAACCAAAGATACCCTGAGAAC...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACGCTTATCTTCTTTTGTaGACACCTCCCTTTCTGTGT +
Preference number: 5 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYAYLLL*TPPFLC
Trigger: ACACAGAAAGGGAGGTGTCAACAAAAGAAGATAAGC...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTTGGGCTTATCTTCTTTaGTTGACACCTCCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIWAYLL*LTPPFL
Trigger: CAGAAAGGGAGGTGTCAACAAAAGAAGATAAGCCCA...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS TCA 90 bp ATCACCCTTGTAATCATCAGAGTTAACATCTGCTTGGATACAGTCTaGGTTTTCAGGGTGGACACTGATGTGTTCATTTCCCATTTCTTC +
Preference number: 5 (lower is better)
Translates to: ITLVIIRVNICLDTV*VFRVDTDVFISHFF
Trigger: GAAGAAATGGGAAATGAACACATCAGTGTCCACCCTGAAAACTCAGACTGTATCCAAGCAGATGTTAACTCTGATGATTACAAGGGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CCA 90 bp TTATCTAAAGTGGCAAGTCCCTCACACTCTTTAGCTGTGGGATTTTaGAAGCCTTCTAAATCCAAAGTGCTCTCTGACTCATTATTACGT +
Preference number: 5 (lower is better)
Translates to: LSKVASPSHSLAVGF*KPSKSKVLSDSLLR
Trigger: ACGTAATAATGAGTCAGAGAGCACTTTGGATTTAGAAGGCTTCCAAAATCCCACAGCTAAAGAGTGTGAGGGACTTGCCACTTTAGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCTTAAATGCATATGGATaGCTGGAAACAGCACATGGT +
Preference number: 5 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGLNAYG*LETAHG
Trigger: ACCATGTGCTGTTTCCAGCAATCCATATGCATTTAA...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTATTCATCCAAGCGGGTaGACTGTAGATTGGGTTTTT +
Preference number: 5 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIIHPSG*TVDWVF
Trigger: AAAAACCCAATCTACAGTCAACCCGCTTGGATGAAT...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATGCAGCCTCTTGTGTCTaGCCACCTATAACCATCTTC +
Preference number: 5 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNAASCV*PPITIF
Trigger: GAAGATGGTTATAGGTGGCAAGACACAAGAGGCTGC...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATCAGTTCTGCAGCCTCTaGTGTCTTGCCACCTATAAC +
Preference number: 5 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNQFCSL*CLATYN
Trigger: GTTATAGGTGGCAAGACACAAGAGGCTGCAGAACTG...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCACGTGGTTTCTAGGCTaGTTAGGTCTTTATGAAACA +
Preference number: 5 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGTWFLG*LGLYET
Trigger: TGTTTCATAAAGACCTAACAAGCCTAGAAACCACGT...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATCTGGACCTCTGCTTCTaGTTTTCAGGACTTCCTGCT +
Preference number: 5 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNLDLCF*FSGLPA
Trigger: AGCAGGAAGTCCTGAAAACAAGAAGCAGAGGTCCAG...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCGAACAATCTGGTAACTaGTGTTGGAACACATTTTCC +
Preference number: 5 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGEQSGN*CWNTFS
Trigger: GGAAAATGTGTTCCAACACAAGTTACCAGATTGTTC...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACGGGCAGTTAAATGCTTaGTTGTCAGACAAGCATTTT +
Preference number: 5 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYGQLNA*LSDKHF
Trigger: AAAATGCTTGTCTGACAACAAAGCATTTAACTGCCC...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR CAA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCGGGCAGTTAAATGCTTaGTTGTCAGACAAGCATTTT +
Preference number: 5 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGGQLNA*LSDKHF
Trigger: AAAATGCTTGTCTGACAACAAAGCATTTAACTGCCC...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR CAA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCAATGGCAATGCGCTTTTaGGGCCAATCCTTCAATTCC +
Preference number: 5 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSMAMRF*GQSFNS
Trigger: GGAATTGAAGGATTGGCCCAAAAAGCGCATTGCCAT...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCTTCCCATTTCTTCTTTaGGTGGGCTTCCAAAACTTT +
Preference number: 5 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGFPFLL*VGFQNF
Trigger: AAAGTTTTGGAAGCCCACCAAAAGAAGAAATGGGAA...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCTCAAGGTCACTCTGTTaGAACCCAAATCCATTTTTG +
Preference number: 5 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGSRSLC*NPNPFL
Trigger: CAAAAATGGATTTGGGTTCAAACAGAGTGACCTTGA...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375963.8
CDS-3UTR CAA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTAAGCAGATAAAAGCCTaGTGTTATGAAGGGCCAATG +
Preference number: 5 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIKQIKA*CYEGPM
Trigger: CATTGGCCCTTCATAACACAAGGCTTTTATCTGCTT...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCAAAGGGTTAATTTACTaGGGGTTTATCAGCACACCA +
Preference number: 5 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGKGLIY*GFISTP
Trigger: TGGTGTGCTGATAAACCCCAAGTAAATTAACCCTTT...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS TCA 90 bp TATAACAGGAATTCTAGGTCCAGGTTTGAATTCTCTCCAGTTGTCTaGATTACCAGTATGTTCATCAGACAGCCATCTCTTACTCTGATC +
Preference number: 5 (lower is better)
Translates to: YNRNSRSRFEFSPVV*ITSMFIRQPSLTLI
Trigger: GATCAGAGTAAGAGATGGCTGTCTGATGAACATACTGGTAATTCAGACAACTGGAGAGAATTCAAACCTGGACCTAGAATTCCTGTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS GCA 90 bp TTTCTAGGCTTGTTAGGTCTTTATGAAACAGTCGTCTTACAGTTCTaGAGCCTCTTGTGTCTTGCCACCTATAACCATCTTCATTTTCTT +
Preference number: 5 (lower is better)
Translates to: FLGLLGLYETVVLQF*SLLCLATYNHLHFL
Trigger: AAGAAAATGAAGATGGTTATAGGTGGCAAGACACAAGAGGCTGCAGAACTGTAAGACGACTGTTTCATAAAGACCTAACAAGCCTAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AAAATGATAAATAAACCGAGGCATAGTTCTGACCAGGTACTATGTCTGCAGGGCTTGAATTCTCTCCAGTaGTCTGAATTACCAGTATGT +
Preference number: 5 (lower is better)
Translates to: KMINKPRHSSDQVLCLQGLNSLQ*SELPVC
Trigger: ACATACTGGTAATTCAGACAACTGGAGAGAATTCAA...GCCCTGCAGACATAGTACCTGGTCAGAACTATGCCTCGGTTTATTTATCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATCTAGCAGCTCCTTCGTaGAAAGTACAGACTCATCGA +
Preference number: 5 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNLAAPS*KVQTHR
Trigger: TCGATGAGTCTGTACTTTCAACGAAGGAGCTGCTAG...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTTGTTCCAAGTTCTCATaGTGTAAGCCAAATTCCTGT +
Preference number: 5 (lower is better)
Translates to: GSTAVAVHTYLICFHTRICSKFS*CKPNSC
Trigger: ACAGGAATTTGGCTTACACAATGAGAACTTGGAACA...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp CATCCACTGAAGGCCCACATAAATAGGTACTCATGTTCATGTTATCACGTCTACTTTACATCCGAATTTTaGAAACCCAATCTGCTACAG +
Preference number: 5 (lower is better)
Translates to: HPLKAHINRYSCSCYHVYFTSEF*KPNLLQ
Trigger: CTGTAGCAGATTGGGTTTCAAAAATTCGGATGTAAA...GTAGACGTGATAACATGAACATGAGTACCTATTTATGTGGGCCTTCAGTGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATACACAGAAGACCACTTaGCTTTTCTCTGCACACCAC +
Preference number: 5 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNTQKTT*LFSAHH
Trigger: GTGGTGTGCAGAGAAAAGCAAAGTGGTCTTCTGTGT...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS-3UTR CAA 90 bp TACCAAATGGTAAATTTACAGGGTCAGTCTCTTGTTCGTCTCAGGACCATACATGGGCAGTTAAATGCTTaGTTGTCAGACAAGCATTTT +
Preference number: 5 (lower is better)
Translates to: YQMVNLQGQSLVRLRTIHGQLNA*LSDKHF
Trigger: AAAATGCTTGTCTGACAACAAAGCATTTAACTGCCC...ATGTATGGTCCTGAGACGAACAAGAGACTGACCCTGTAAATTTACCATTTGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375948.2
CDS-3UTR CAA 90 bp AAATTTACAGGGTCAGTCTCTTGTTCGTCTCAGGACCATACATATTTCAAAAATCCAAAGGAACCAGCTTaGGTTCTAGTTTTCCAAGGG +
Preference number: 5 (lower is better)
Translates to: KFTGSVSCSSQDHTYFKNPKEPA*VLVFQG
Trigger: CCCTTGGAAAACTAGAACCAAAGCTGGTTCCTTTGG...ATTTTTGAAATATGTATGGTCCTGAGACGAACAAGAGACTGACCCTGTAAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375948.2
CDS-3UTR CAA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATAACCCAAATCCATTTTaGGAGGAGCCAAACAGGCTC +
Preference number: 5 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNNPNPF*EEPNRL
Trigger: GAGCCTGTTTGGCTCCTCCAAAAATGGATTTGGGTT...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375963.8
CDS-3UTR CAA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTTCCTTTGGAAATCCCTaGACAGGAATACCAAATACT +
Preference number: 5 (lower is better)
Translates to: GSTAVAVHTYLICFHTRISFGNP*TGIPNT
Trigger: AGTATTTGGTATTCCTGTCAAGGGATTTCCAAAGGA...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCAATTCATCCAAGCGGGTaGACTGTAGATTGGGTTTTT +
Preference number: 5 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSIHPSG*TVDWVF
Trigger: AAAAACCCAATCTACAGTCAACCCGCTTGGATGAAT...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCGAGATACCAATTCTTaGACACGAATACTTATCACT +
Preference number: 5 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIRDTNS*TRILIT
Trigger: AGTGATAAGTATTCGTGTCAAAGAATTGGTATCTCG...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCAAAGCAGATAAAAGCCTaGTGTTATGAAGGGCCAATG +
Preference number: 5 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSKQIKA*CYEGPM
Trigger: CATTGGCCCTTCATAACACAAGGCTTTTATCTGCTT...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCAGCTTATCTTCTTTTGTaGACACCTCCCTTTCTGTGT +
Preference number: 5 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSAYLLL*TPPFLC
Trigger: ACACAGAAAGGGAGGTGTCAACAAAAGAAGATAAGC...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp GGAAGTACAGCAGTAGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTGGCAAACAGGACTACTaGTTTTCCTTACTTCATTTT +
Preference number: 5 (lower is better)
Translates to: GSTAVAVHTYLICFHTRIGKQDY*FSLLHF
Trigger: AAAATGAAGTAAGGAAAACAAGTAGTCCTGTTTGCC...AATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCTACTGCTGTACTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATTCACGAAATAAGGTTTaGCTGTATCTCCCATGGTCT +
Preference number: 5 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNSRNKV*LYLPWS
Trigger: AGACCATGGGAGATACAGCAAAACCTTATTTCGTGA...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCATTAAATGCATATGGATaGCTGGAAACAGCACATGGT +
Preference number: 5 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSLNAYG*LETAHG
Trigger: ACCATGTGCTGTTTCCAGCAATCCATATGCATTTAA...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATATTCATCCAAGCGGGTaGACTGTAGATTGGGTTTTT +
Preference number: 5 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNIHPSG*TVDWVF
Trigger: AAAAACCCAATCTACAGTCAACCCGCTTGGATGAAT...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATAATTCCTGTACCACTTaGTCAATGGCAATGCCAACT +
Preference number: 5 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNNSCTT*SMAMPT
Trigger: AGTTGGCATTGCCATTGACAAAGTGGTACAGGAATT...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCATGTTCCAAGTTCTCATaGTGTAAGCCAAATTCCTGT +
Preference number: 5 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSCSKFS*CKPNSC
Trigger: ACAGGAATTTGGCTTACACAATGAGAACTTGGAACA...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCAGAACAATCTGGTAACTaGTGTTGGAACACATTTTCC +
Preference number: 5 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSEQSGN*CWNTFS
Trigger: GGAAAATGTGTTCCAACACAAGTTACCAGATTGTTC...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCATTCCCATTTCTTCTTTaGGTGGGCTTCCAAAACTTT +
Preference number: 5 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSFPFLL*VGFQNF
Trigger: AAAGTTTTGGAAGCCCACCAAAAGAAGAAATGGGAA...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATGCTTATCTTCTTTTGTaGACACCTCCCTTTCTGTGT +
Preference number: 5 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNAYLLL*TPPFLC
Trigger: ACACAGAAAGGGAGGTGTCAACAAAAGAAGATAAGC...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATACGTGGTTTCTAGGCTaGTTAGGTCTTTATGAAACA +
Preference number: 5 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNTWFLG*LGLYET
Trigger: TGTTTCATAAAGACCTAACAAGCCTAGAAACCACGT...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp ACAAATAGCAATAAAATGATGTCCGTAAATCGGAAGTACAGCAGTAGCAGTTCACGAGATACCAATTCTTaGACACGAATACTTATCACT +
Preference number: 5 (lower is better)
Translates to: TNSNKMMSVNRKYSSSSSRDTNS*TRILIT
Trigger: AGTGATAAGTATTCGTGTCAAAGAATTGGTATCTCG...TGAACTGCTACTGCTGTACTTCCGATTTACGGACATCATTTTATTGCTATTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATAAAGGGTTAATTTACTaGGGGTTTATCAGCACACCA +
Preference number: 5 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNKGLIY*GFISTP
Trigger: TGGTGTGCTGATAAACCCCAAGTAAATTAACCCTTT...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATTTGAATTCTCTCCAGTaGTCTGAATTACCAGTATGT +
Preference number: 5 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNLNSLQ*SELPVC
Trigger: ACATACTGGTAATTCAGACAACTGGAGAGAATTCAA...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS-3UTR CAA 90 bp AGCAGTTCATACATATCTGATATGCTTTCACACCAGGATTCAGTAAACAACAATTTTACATCCGAATTTTaGAAACCCAATCTGCTACAG +
Preference number: 5 (lower is better)
Translates to: SSSYISDMLSHQDSVNNNFTSEF*KPNLLQ
Trigger: CTGTAGCAGATTGGGTTTCAAAAATTCGGATGTAAA...ATTGTTGTTTACTGAATCCTGGTGTGAAAGCATATCAGATATGTATGAACTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CCA 72 bp GGAGAATCAGCCCGGAGGCGAGTCTGGCAGGGACGTTaGGAGAAGGCGCCCAAGAGCACTCACCACCTTCGC +
Preference number: 6 (lower is better)
Translates to: GESARRRVWQGR*EKAPKSTHHLR
Trigger: GCGAAGGTGGTGAGTGCTCTTGGGCGCCTTCTCCCAACGTCCCTGCCAGACTCGCCTCCGGGCTGATTCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CCA 72 bp AGGCCGGACAGCTACTCTGGAGTCCAGGAAACCAACTaGAGAATCAGCCCGGAGGCGAGTCTGGCAGGGACG +
Preference number: 6 (lower is better)
Translates to: RPDSYSGVQETN*RISPEASLAGT
Trigger: CGTCCCTGCCAGACTCGCCTCCGGGCTGATTCTCCAGTTGGTTTCCTGGACTCCAGAGTAGCTGTCCGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS TCA 72 bp CTGCCCTGGGAAGCCCCATCACTGAATTGGCTGGACTaGATTTCAGGGGCGAGAGGGAGGCACCAGGAGGAG +
Preference number: 6 (lower is better)
Translates to: LPWEAPSLNWLD*ISGARGRHQEE
Trigger: CTCCTCCTGGTGCCTCCCTCTCGCCCCTGAAATTCAGTCCAGCCAATTCAGTGATGGGGCTTCCCAGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469004.1
CDS CCA 72 bp AGGAAACCAACTGGAGAATCAGCCCGGAGGCGAGTCTaGCAGGGACGTTGGGAGAAGGCGCCCAAGAGCACT +
Preference number: 6 (lower is better)
Translates to: RKPTGESARRRV*QGRWEKAPKST
Trigger: AGTGCTCTTGGGCGCCTTCTCCCAACGTCCCTGCCAGACTCGCCTCCGGGCTGATTCTCCAGTTGGTTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CAA 72 bp TTTTCTCCTCCCCTAGAACTCCAGCAGGTTAGGCAATaGGCCAGAAGAGCTGAGCCACAGAAACTGCAGGGG +
Preference number: 6 (lower is better)
Translates to: FSPPLELQQVRQ*ARRAEPQKLQG
Trigger: CCCCTGCAGTTTCTGTGGCTCAGCTCTTCTGGCCAATTGCCTAACCTGCTGGAGTTCTAGGGGAGGAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469004.1
CDS TCA 72 bp CCCAGGTCAGCAGCTGCCCGCATTGGCTTGGCTTTCTaGGGTGTGCACTGTATGGGCTTATCTTCTTTTGTT +
Preference number: 6 (lower is better)
Translates to: PRSAAARIGLAF*GVHCMGLSSFV
Trigger: AACAAAAGAAGATAAGCCCATACAGTGCACACCTCAGAAAGCCAAGCCAATGCGGGCAGCTGCTGACCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS CAA 72 bp TCTCCTCAGCCTGCTGTAAGCCTAGCAGCTCCTTCGTaGAAAGTACAGACTCATCGATCACAGGGCCTTCCA +
Preference number: 6 (lower is better)
Translates to: SPQPAVSLAAPS*KVQTHRSQGLP
Trigger: TGGAAGGCCCTGTGATCGATGAGTCTGTACTTTCAACGAAGGAGCTGCTAGGCTTACAGCAGGCTGAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375947.1
ENST00000375960.6
ENST00000375963.8
CDS CAA 90 bp TCTTCAGTCTCTCCTCAGCCTGCTGTAAGCCTAGCAGCTCCTTCGTaGAAAGTACAGACTCATCGATCACAGGGCCTTCCAAGTCTCCAT +
Preference number: 6 (lower is better)
Translates to: SSVSPQPAVSLAAPS*KVQTHRSQGLPSLH
Trigger: ATGGAGACTTGGAAGGCCCTGTGATCGATGAGTCTGTACTTTCAACGAAGGAGCTGCTAGGCTTACAGCAGGCTGAGGAGAGACTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375947.1
ENST00000375960.6
ENST00000375963.8
CDS TCA 72 bp CGTGTGCTGCCACAGACAACATGCTCTCCACGTTTCTaGTCAACAGTCAACAGATGCTTGCCCTTCCTTCCA +
Preference number: 6 (lower is better)
Translates to: RVLPQTTCSPRF*STVNRCLPFLP
Trigger: TGGAAGGAAGGGCAAGCATCTGTTGACTGTTGATCAGAAACGTGGAGAGCATGTTGTCTGTGGCAGCACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS GCA 72 bp CAGCAGCTGCCCGCATTGGCTTGGCTTTCTGAGGTGTaGACTGTATGGGCTTATCTTCTTTTGTTGACACCT +
Preference number: 6 (lower is better)
Translates to: QQLPALAWLSEV*TVWAYLLLLTP
Trigger: AGGTGTCAACAAAAGAAGATAAGCCCATACAGTGCACACCTCAGAAAGCCAAGCCAATGCGGGCAGCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS GCA 72 bp GACTCATCGATCACAGGGCCTTCCAAGTCTCCATCCTaGTCATTTTCCTCATTTCTAGTCTTCCGTGGCTTC +
Preference number: 6 (lower is better)
Translates to: DSSITGPSKSPS*SFSSFLVFRGF
Trigger: GAAGCCACGGAAGACTAGAAATGAGGAAAATGAGCAGGATGGAGACTTGGAAGGCCCTGTGATCGATGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375947.1
ENST00000375960.6
ENST00000375963.8
CDS GCA 72 bp CTGTCAATGCAGTCTCTCTTCAGTCTCTCCTCAGCCTaGTGTAAGCCTAGCAGCTCCTTCGTTGAAAGTACA +
Preference number: 6 (lower is better)
Translates to: LSMQSLFSLSSA*CKPSSSFVEST
Trigger: TGTACTTTCAACGAAGGAGCTGCTAGGCTTACAGCAGGCTGAGGAGAGACTGAAGAGAGACTGCATTGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375947.1
ENST00000375960.6
ENST00000375963.8
CDS CCA 72 bp ACCACTTTGTCAATGGCAATGCCAACTGCATTTATCTaGGAGGGTGTTGGTGGGGGTAACGTAGTGAGCAAC +
Preference number: 6 (lower is better)
Translates to: TTLSMAMPTAFI*EGVGGGNVVSN
Trigger: GTTGCTCACTACGTTACCCCCACCAACACCCTCCCAGATAAATGCAGTTGGCATTGCCATTGACAAAGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375947.1
ENST00000375960.6
ENST00000375963.8
CDS CCA 72 bp CCCGCATTGGCTTGGCTTTCTGAGGTGTGCACTGTATaGGCTTATCTTCTTTTGTTGACACCTCCCTTTCTG +
Preference number: 6 (lower is better)
Translates to: PALAWLSEVCTV*AYLLLLTPPFL
Trigger: CAGAAAGGGAGGTGTCAACAAAAGAAGATAAGCCCATACAGTGCACACCTCAGAAAGCCAAGCCAATGCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS TCA 72 bp TTGTTCTCAGGGTATCTTTGGTTCAGGGCATCTTCCTaGTCTCGCCGCCGTCTTACTTTTCTCCTCATAGGA +
Preference number: 6 (lower is better)
Translates to: LFSGYLWFRASS*SRRRLTFLLIG
Trigger: TCCTATGAGGAGAAAAGTAAGACGGCGGCGAGATCAGGAAGATGCCCTGAACCAAAGATACCCTGAGAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS CCA 72 bp TGCTTTTCTCTGCACACCACCACTGGCACCCTAGCATaGAAGTCTGCATCAACATCAATAAAGGAGTCACTG +
Preference number: 6 (lower is better)
Translates to: CFSLHTTTGTLA*KSASTSIKESL
Trigger: CAGTGACTCCTTTATTGATGTTGATGCAGACTTCCATGCTAGGGTGCCAGTGGTGGTGTGCAGAGAAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375948.2
ENST00000375963.8
CDS CCA 72 bp TCCATCCTGCTCATTTTCCTCATTTCTAGTCTTCCGTaGCTTCCTAGGTCTGGACCTCTGCTTCTTGTTTTC +
Preference number: 6 (lower is better)
Translates to: SILLIFLISSLP*LPRSGPLLLVF
Trigger: GAAAACAAGAAGCAGAGGTCCAGACCTAGGAAGCCACGGAAGACTAGAAATGAGGAAAATGAGCAGGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375947.1
ENST00000375960.6
ENST00000375963.8
CDS CCA 72 bp AAGAAAGAAAATGGCCATCAGGGCAAACACATAAGGTaGCAGACCTCCTTCTTCAGGGCGATCTATACTGCA +
Preference number: 6 (lower is better)
Translates to: KKENGHQGKHIR*QTSFFRAIYTA
Trigger: TGCAGTATAGATCGCCCTGAAGAAGGAGGTCTGCCACCTTATGTGTTTGCCCTGATGGCCATTTTCTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375948.2
ENST00000375963.8
CDS CCA 72 bp GTGGCAAGTCCCTCACACTCTTTAGCTGTGGGATTTTaGAAGCCTTCTAAATCCAAAGTGCTCTCTGACTCA +
Preference number: 6 (lower is better)
Translates to: VASPSHSLAVGF*KPSKSKVLSDS
Trigger: TGAGTCAGAGAGCACTTTGGATTTAGAAGGCTTCCAAAATCCCACAGCTAAAGAGTGTGAGGGACTTGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CCA 72 bp TCCTCCTCTTCATCAGAGGGAATCATTTCTGATGTCTaGCCCTGTACTGAGTGGGTAAAGTGGTTTAGAGAG +
Preference number: 6 (lower is better)
Translates to: SSSSSEGIISDV*PCTEWVKWFRE
Trigger: CTCTCTAAACCACTTTACCCACTCAGTACAGGGCCAGACATCAGAAATGATTCCCTCTGATGAAGAGGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CCA 72 bp GAGGGAATCATTTCTGATGTCTGGCCCTGTACTGAGTaGGTAAAGTGGTTTAGAGAGTCTTCTAGTTCCTCA +
Preference number: 6 (lower is better)
Translates to: EGIISDVWPCTE*VKWFRESSSSS
Trigger: TGAGGAACTAGAAGACTCTCTAAACCACTTTACCCACTCAGTACAGGGCCAGACATCAGAAATGATTCCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CAA 90 bp TGTTTTCAGGACTTCCTGCTTCCATTTCTGACGTGGTTTCTAGGCTaGTTAGGTCTTTATGAAACAGTCGTCTTACAGTTCTGCAGCCTC +
Preference number: 6 (lower is better)
Translates to: CFQDFLLPFLTWFLG*LGLYETVVLQFCSL
Trigger: GAGGCTGCAGAACTGTAAGACGACTGTTTCATAAAGACCTAACAAGCCTAGAAACCACGTCAGAAATGGAAGCAGGAAGTCCTGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CAA 90 bp CTCTGTTCCAAGTTCTCATTGTGTAAGCCAAATTCCTGTACCACTTaGTCAATGGCAATGCCAACTGCATTTATCTGGGAGGGTGTTGGT +
Preference number: 6 (lower is better)
Translates to: LCSKFSLCKPNSCTT*SMAMPTAFIWEGVG
Trigger: ACCAACACCCTCCCAGATAAATGCAGTTGGCATTGCCATTGACAAAGTGGTACAGGAATTTGGCTTACACAATGAGAACTTGGAACAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375947.1
ENST00000375960.6
ENST00000375963.8
CDS CAA 90 bp TCTAGTTCCTCAGTACCTTCTGTACTTTCTCCATCAAGATCAGCCTaGTTATCTAAAGTGGCAAGTCCCTCACACTCTTTAGCTGTGGGA +
Preference number: 6 (lower is better)
Translates to: SSSSVPSVLSPSRSA*LSKVASPSHSLAVG
Trigger: TCCCACAGCTAAAGAGTGTGAGGGACTTGCCACTTTAGATAACAAGGCTGATCTTGATGGAGAAAGTACAGAAGGTACTGAGGAACTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS GCA 72 bp AATCCAAAGTGCTCTCTGACTCATTATTACGTGTGCTaGCACAGACAACATGCTCTCCACGTTTCTGATCAA +
Preference number: 6 (lower is better)
Translates to: NPKCSLTHYYVC*HRQHALHVSDQ
Trigger: TTGATCAGAAACGTGGAGAGCATGTTGTCTGTGGCAGCACACGTAATAATGAGTCAGAGAGCACTTTGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS GCA 72 bp CTAAATCCAAAGTGCTCTCTGACTCATTATTACGTGTaGTGCCACAGACAACATGCTCTCCACGTTTCTGAT +
Preference number: 6 (lower is better)
Translates to: LNPKCSLTHYYV*CHRQHALHVSD
Trigger: ATCAGAAACGTGGAGAGCATGTTGTCTGTGGCAGCACACGTAATAATGAGTCAGAGAGCACTTTGGATTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CCA 72 bp CATTGTGTAAGCCAAATTCCTGTACCACTTTGTCAATaGCAATGCCAACTGCATTTATCTGGGAGGGTGTTG +
Preference number: 6 (lower is better)
Translates to: HCVSQIPVPLCQ*QCQLHLSGRVL
Trigger: CAACACCCTCCCAGATAAATGCAGTTGGCATTGCCATTGACAAAGTGGTACAGGAATTTGGCTTACACAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375947.1
ENST00000375960.6
ENST00000375963.8
CDS CCA 72 bp CAGGTATTTGCAGCTGAACTGGTAGCACCAGGACCTTaGGCCAAAACTGAGTTTTTGAGCTTATCATCTTTT +
Preference number: 6 (lower is better)
Translates to: QVFAAELVAPGP*AKTEFLSLSSF
Trigger: AAAAGATGATAAGCTCAAAAACTCAGTTTTGGCCCAAGGTCCTGGTGCTACCAGTTCAGCTGCAAATACCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
ENST00000469004.1
CDS CCA 72 bp ATTTCTGATGTCTGGCCCTGTACTGAGTGGGTAAAGTaGTTTAGAGAGTCTTCTAGTTCCTCAGTACCTTCT +
Preference number: 6 (lower is better)
Translates to: ISDVWPCTEWVK*FRESSSSSVPS
Trigger: AGAAGGTACTGAGGAACTAGAAGACTCTCTAAACCACTTTACCCACTCAGTACAGGGCCAGACATCAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS TCA 72 bp ATTTCTGACGTGGTTTCTAGGCTTGTTAGGTCTTTATaGAACAGTCGTCTTACAGTTCTGCAGCCTCTTGTG +
Preference number: 6 (lower is better)
Translates to: ISDVVSRLVRSL*NSRLTVLQPLV
Trigger: CACAAGAGGCTGCAGAACTGTAAGACGACTGTTTCATAAAGACCTAACAAGCCTAGAAACCACGTCAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS TCA 72 bp ATTCTTTTGAAGTCTTCAGGACAGTCCTTCTTTAGATaGCCCTCTCGTTTGCATAAGCTGCACACTACCGTA +
Preference number: 6 (lower is better)
Translates to: ILLKSSGQSFFR*PSRLHKLHTTV
Trigger: TACGGTAGTGTGCAGCTTATGCAAACGAGAGGGTCATCTAAAGAAGGACTGTCCTGAAGACTTCAAAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS CAA 72 bp GACTTCCTGCTTCCATTTCTGACGTGGTTTCTAGGCTaGTTAGGTCTTTATGAAACAGTCGTCTTACAGTTC +
Preference number: 6 (lower is better)
Translates to: DFLLPFLTWFLG*LGLYETVVLQF
Trigger: GAACTGTAAGACGACTGTTTCATAAAGACCTAACAAGCCTAGAAACCACGTCAGAAATGGAAGCAGGAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CAA 72 bp CTTTCTGAGGTGTGCACTGTATGGGCTTATCTTCTTTaGTTGACACCTCCCTTTCTGTGTACTTGTTGTGAA +
Preference number: 6 (lower is better)
Translates to: LSEVCTVWAYLL*LTPPFLCTCCE
Trigger: TTCACAACAAGTACACAGAAAGGGAGGTGTCAACAAAAGAAGATAAGCCCATACAGTGCACACCTCAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS CAA 90 bp CCATCTCTTACTCTGATCTTTGTGGCTGTCATTCATCCAAGCGGGTaGACTGTAGATTGGGTTTTTAAATGCATATGGATTGCTGGAAAC +
Preference number: 6 (lower is better)
Translates to: PSLTLIFVAVIHPSG*TVDWVFKCIWIAGN
Trigger: GTTTCCAGCAATCCATATGCATTTAAAAACCCAATCTACAGTCAACCCGCTTGGATGAATGACAGCCACAAAGATCAGAGTAAGAGATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS TCA 72 bp GTAATCATCAGAGTTAACATCTGCTTGGATACAGTCTaGGTTTTCAGGGTGGACACTGATGTGTTCATTTCC +
Preference number: 6 (lower is better)
Translates to: VIIRVNICLDTV*VFRVDTDVFIS
Trigger: GGAAATGAACACATCAGTGTCCACCCTGAAAACTCAGACTGTATCCAAGCAGATGTTAACTCTGATGATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS GCA 72 bp TTGTTAGGTCTTTATGAAACAGTCGTCTTACAGTTCTaGAGCCTCTTGTGTCTTGCCACCTATAACCATCTT +
Preference number: 6 (lower is better)
Translates to: LLGLYETVVLQF*SLLCLATYNHL
Trigger: AAGATGGTTATAGGTGGCAAGACACAAGAGGCTGCAGAACTGTAAGACGACTGTTTCATAAAGACCTAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CCA 72 bp AAAAACTTGGGTGTTAATGGTGGCAGAGGTTCTAGCTaGATTCTTTTGAAGTCTTCAGGACAGTCCTTCTTT +
Preference number: 6 (lower is better)
Translates to: KNLGVNGGRGSS*ILLKSSGQSFF
Trigger: AAAGAAGGACTGTCCTGAAGACTTCAAAAGAATCCAGCTAGAACCTCTGCCACCATTAACACCCAAGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS CAA 72 bp ACAGGAATTCTAGGTCCAGGTTTGAATTCTCTCCAGTaGTCTGAATTACCAGTATGTTCATCAGACAGCCAT +
Preference number: 6 (lower is better)
Translates to: TGILGPGLNSLQ*SELPVCSSDSH
Trigger: ATGGCTGTCTGATGAACATACTGGTAATTCAGACAACTGGAGAGAATTCAAACCTGGACCTAGAATTCCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CAA 72 bp TCAGTACCTTCTGTACTTTCTCCATCAAGATCAGCCTaGTTATCTAAAGTGGCAAGTCCCTCACACTCTTTA +
Preference number: 6 (lower is better)
Translates to: SVPSVLSPSRSA*LSKVASPSHSL
Trigger: TAAAGAGTGTGAGGGACTTGCCACTTTAGATAACAAGGCTGATCTTGATGGAGAAAGTACAGAAGGTACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CAA 90 bp CGGTTTATAACAGGAATTCTAGGTCCAGGTTTGAATTCTCTCCAGTaGTCTGAATTACCAGTATGTTCATCAGACAGCCATCTCTTACTC +
Preference number: 6 (lower is better)
Translates to: RFITGILGPGLNSLQ*SELPVCSSDSHLLL
Trigger: GAGTAAGAGATGGCTGTCTGATGAACATACTGGTAATTCAGACAACTGGAGAGAATTCAAACCTGGACCTAGAATTCCTGTTATAAACCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CAA 90 bp TCTGCAGCCTCTTGTGTCTTGCCACCTATAACCATCTTCATTTTCTaGAAAGGAGTCTTTTCTTTGTCGGTTTATAACAGGAATTCTAGG +
Preference number: 6 (lower is better)
Translates to: SAASCVLPPITIFIF*KGVFSLSVYNRNSR
Trigger: CCTAGAATTCCTGTTATAAACCGACAAAGAAAAGACTCCTTTCAAGAAAATGAAGATGGTTATAGGTGGCAAGACACAAGAGGCTGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CAA 90 bp GTCTTTATGAAACAGTCGTCTTACAGTTCTGCAGCCTCTTGTGTCTaGCCACCTATAACCATCTTCATTTTCTTGAAAGGAGTCTTTTCT +
Preference number: 6 (lower is better)
Translates to: VFMKQSSYSSAASCV*PPITIFIFLKGVFS
Trigger: AGAAAAGACTCCTTTCAAGAAAATGAAGATGGTTATAGGTGGCAAGACACAAGAGGCTGCAGAACTGTAAGACGACTGTTTCATAAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CAA 90 bp TTGTTAGGTCTTTATGAAACAGTCGTCTTACAGTTCTGCAGCCTCTaGTGTCTTGCCACCTATAACCATCTTCATTTTCTTGAAAGGAGT +
Preference number: 6 (lower is better)
Translates to: LLGLYETVVLQFCSL*CLATYNHLHFLERS
Trigger: ACTCCTTTCAAGAAAATGAAGATGGTTATAGGTGGCAAGACACAAGAGGCTGCAGAACTGTAAGACGACTGTTTCATAAAGACCTAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CAA 90 bp TTTTCCATGATACGTTTAATTTCCAGCCTCTGTTCCAAGTTCTCATaGTGTAAGCCAAATTCCTGTACCACTTTGTCAATGGCAATGCCA +
Preference number: 6 (lower is better)
Translates to: FSMIRLISSLCSKFS*CKPNSCTTLSMAMP
Trigger: TGGCATTGCCATTGACAAAGTGGTACAGGAATTTGGCTTACACAATGAGAACTTGGAACAGAGGCTGGAAATTAAACGTATCATGGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375947.1
ENST00000375960.6
ENST00000375963.8
CDS TCA 72 bp AATTCTAGGTCCAGGTTTGAATTCTCTCCAGTTGTCTaGATTACCAGTATGTTCATCAGACAGCCATCTCTT +
Preference number: 6 (lower is better)
Translates to: NSRSRFEFSPVV*ITSMFIRQPSL
Trigger: AAGAGATGGCTGTCTGATGAACATACTGGTAATTCAGACAACTGGAGAGAATTCAAACCTGGACCTAGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS TCA 72 bp GCCTTGTGTTATGAAGGGCCAATGTGTTATACAAACTaGTATCTACTTCCAGACCACTTCTCAAATGGAAGA +
Preference number: 6 (lower is better)
Translates to: ALCYEGPMCYTN*YLLPDHFSNGR
Trigger: TCTTCCATTTGAGAAGTGGTCTGGAAGTAGATATCAGTTTGTATAACACATTGGCCCTTCATAACACAAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375957.5
ENST00000375960.6
ENST00000375963.8
CDS TCA 72 bp TCTTTTCACCTTTGTATATCTCTTGAAGGACAGGAATaGCTGGTGGATTCCTCTGCTGGAGAAAATATAGCA +
Preference number: 6 (lower is better)
Translates to: SFHLCISLEGQE*LVDSSAGENIA
Trigger: TGCTATATTTTCTCCAGCAGAGGAATCCACCAGTCATTCCTGTCCTTCAAGAGATATACAAAGGTGAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CAA 72 bp ACTCTGATCTTTGTGGCTGTCATTCATCCAAGCGGGTaGACTGTAGATTGGGTTTTTAAATGCATATGGATT +
Preference number: 6 (lower is better)
Translates to: TLIFVAVIHPSG*TVDWVFKCIWI
Trigger: AATCCATATGCATTTAAAAACCCAATCTACAGTCAACCCGCTTGGATGAATGACAGCCACAAAGATCAGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CAA 72 bp CTTTATGAAACAGTCGTCTTACAGTTCTGCAGCCTCTaGTGTCTTGCCACCTATAACCATCTTCATTTTCTT +
Preference number: 6 (lower is better)
Translates to: LYETVVLQFCSL*CLATYNHLHFL
Trigger: AAGAAAATGAAGATGGTTATAGGTGGCAAGACACAAGAGGCTGCAGAACTGTAAGACGACTGTTTCATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CAA 90 bp GAGTCTTTTCTTTGTCGGTTTATAACAGGAATTCTAGGTCCAGGTTaGAATTCTCTCCAGTTGTCTGAATTACCAGTATGTTCATCAGAC +
Preference number: 6 (lower is better)
Translates to: ESFLCRFITGILGPG*NSLQLSELPVCSSD
Trigger: GTCTGATGAACATACTGGTAATTCAGACAACTGGAGAGAATTCAAACCTGGACCTAGAATTCCTGTTATAAACCGACAAAGAAAAGACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CAA 90 bp GACATAATGGCTGGAAACTGGATGTCAATGTTTACATCCGAATTTTaGAAACCCAATCTGCTACAGGATGACCCATATAATCTTAGGGAA +
Preference number: 6 (lower is better)
Translates to: DIMAGNWMSMFTSEF*KPNLLQDDPYNLRE
Trigger: TTCCCTAAGATTATATGGGTCATCCTGTAGCAGATTGGGTTTCAAAAATTCGGATGTAAACATTGACATCCAGTTTCCAGCCATTATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS TCA 72 bp CTGGAAACTGGATGTCAATGTTTACATCCGAATTTTTaGAACCCAATCTGCTACAGGATGACCCATATAATC +
Preference number: 6 (lower is better)
Translates to: LETGCQCLHPNF*NPICYRMTHII
Trigger: GATTATATGGGTCATCCTGTAGCAGATTGGGTTTCAAAAATTCGGATGTAAACATTGACATCCAGTTTCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CCA 72 bp TTAACATCTGCTTGGATACAGTCTGAGTTTTCAGGGTaGACACTGATGTGTTCATTTCCCATTTCTTCTTTT +
Preference number: 6 (lower is better)
Translates to: LTSAWIQSEFSG*TLMCSFPISSF
Trigger: AAAAGAAGAAATGGGAAATGAACACATCAGTGTCCACCCTGAAAACTCAGACTGTATCCAAGCAGATGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CAA 72 bp CTTTGTCGGTTTATAACAGGAATTCTAGGTCCAGGTTaGAATTCTCTCCAGTTGTCTGAATTACCAGTATGT +
Preference number: 6 (lower is better)
Translates to: LCRFITGILGPG*NSLQLSELPVC
Trigger: ACATACTGGTAATTCAGACAACTGGAGAGAATTCAAACCTGGACCTAGAATTCCTGTTATAAACCGACAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CAA 72 bp ATACGTTTAATTTCCAGCCTCTGTTCCAAGTTCTCATaGTGTAAGCCAAATTCCTGTACCACTTTGTCAATG +
Preference number: 6 (lower is better)
Translates to: IRLISSLCSKFS*CKPNSCTTLSM
Trigger: CATTGACAAAGTGGTACAGGAATTTGGCTTACACAATGAGAACTTGGAACAGAGGCTGGAAATTAAACGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277141.10
ENST00000375947.1
ENST00000375960.6
ENST00000375963.8
CDS CAA 72 bp GCTGGAAACTGGATGTCAATGTTTACATCCGAATTTTaGAAACCCAATCTGCTACAGGATGACCCATATAAT +
Preference number: 6 (lower is better)
Translates to: AGNWMSMFTSEF*KPNLLQDDPYN
Trigger: ATTATATGGGTCATCCTGTAGCAGATTGGGTTTCAAAAATTCGGATGTAAACATTGACATCCAGTTTCCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CAA 90 bp TCAATAATGGCTGGAAACTGGATGTCAATGTTTACATCCGAATTTTaGAAACCCAATCTGCTACAGGATGACCCATATAATCTTAGGGAA +
Preference number: 6 (lower is better)
Translates to: SIMAGNWMSMFTSEF*KPNLLQDDPYNLRE
Trigger: TTCCCTAAGATTATATGGGTCATCCTGTAGCAGATTGGGTTTCAAAAATTCGGATGTAAACATTGACATCCAGTTTCCAGCCATTATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375960.6
CDS CCA 72 bp CCGAATATGTTCACGAGCCTGATCTTCTATAATTGTTaGAGAAAAATCCTTATAACACTGGATACAGACTTG +
Preference number: 6 (lower is better)
Translates to: PNMFTSLIFYNC*RKILITLDTDL
Trigger: CAAGTCTGTATCCAGTGTTATAAGGATTTTTCTCCAACAATTATAGAAGATCAGGCTCGTGAACATATTCGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277141.10
ENST00000375963.8
CDS CAA 72 bp TCTTGTGTCTTGCCACCTATAACCATCTTCATTTTCTaGAAAGGAGTCTTTTCTTTGTCGGTTTATAACAGG +
Preference number: 6 (lower is better)
Translates to: SCVLPPITIFIF*KGVFSLSVYNR
Trigger: CCTGTTATAAACCGACAAAGAAAAGACTCCTTTCAAGAAAATGAAGATGGTTATAGGTGGCAAGACACAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CAA 72 bp TTGGGCCAATCCTTCAATTCCCGAGATACCAATTCTTaGACACGAATACTTATCACTAAATCAGCCAAATTA +
Preference number: 6 (lower is better)
Translates to: LGQSFNSRDTNS*TRILITKSAKL
Trigger: TAATTTGGCTGATTTAGTGATAAGTATTCGTGTCAAAGAATTGGTATCTCGGGAATTGAAGGATTGGCCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CAA 90 bp TTGCCACCTATAACCATCTTCATTTTCTTGAAAGGAGTCTTTTCTTaGTCGGTTTATAACAGGAATTCTAGGTCCAGGTTTGAATTCTCT +
Preference number: 6 (lower is better)
Translates to: LPPITIFIFLKGVFS*SVYNRNSRSRFEFS
Trigger: AGAGAATTCAAACCTGGACCTAGAATTCCTGTTATAAACCGACAAAGAAAAGACTCCTTTCAAGAAAATGAAGATGGTTATAGGTGGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CAA 90 bp ATGCGCTTTTTGGGCCAATCCTTCAATTCCCGAGATACCAATTCTTaGACACGAATACTTATCACTAAATCAGCCAAATTAAATTCTAAA +
Preference number: 6 (lower is better)
Translates to: MRFLGQSFNSRDTNS*TRILITKSAKLNSK
Trigger: TTTAGAATTTAATTTGGCTGATTTAGTGATAAGTATTCGTGTCAAAGAATTGGTATCTCGGGAATTGAAGGATTGGCCCAAAAAGCGCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277141.10
ENST00000375960.6
ENST00000375963.8
CDS CCA 72 bp TTGCTTAATGAGAATCCTTCAATAATGGCTGGAAACTaGATGTCAATGTTTACATCCGAATTTTTGAAACCC +
Preference number: 6 (lower is better)
Translates to: LLNENPSIMAGN*MSMFTSEFLKP
Trigger: GGGTTTCAAAAATTCGGATGTAAACATTGACATCCAGTTTCCAGCCATTATTGAAGGATTCTCATTAAGCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375960.6