RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TUT4 (Homo sapiens)

Ensembl gene IDs: ENSG00000134744

Ensembl transcript IDs: ENST00000257177.9, ENST00000355809.4, ENST00000371541.5, ENST00000371544.7, ENST00000466440.1, ENST00000469810.1, ENST00000470212.1, ENST00000471623.1, ENST00000473856.5, ENST00000474453.6, ENST00000481133.1, ENST00000481528.1, ENST00000484723.6, ENST00000494469.5, ENST00000497120.1, ENST00000524582.1, ENST00000527941.5, ENST00000528457.5, ENST00000528642.5, ENST00000531722.5

Found 393 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGAATACCTGGCACAAAACAAGTGCTCAGTGTCTATTTGATGAGTaGCTAAATCAGAGGTCAGCAAGTTTCGTCTATAAAGGGGCGAAT +
Preference number: 1 (lower is better)
Translates to: QNTWHKTSAQCLFDE*LNQRSASFVYKGAN
Trigger: ATTCGCCCCTTTATAGACGAAACTTGCTGACCTCTGATTTAGGCACTCATCAAATAGACACTGAGCACTTGTTTTGTGCCAGGTATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355809.4
3UTR TCA 90 bp TTACATTCCCACTTCACAAACTTCTCTTCTACTATGCCCTTCAGCTaGAAGTCATCCATTCTTTTTGGGTCAAAGCCTTCAATCCAACTT +
Preference number: 1 (lower is better)
Translates to: LHSHFTNFSSTMPFS*KSSILFGSKPSIQL
Trigger: AAGTTGGATTGAAGGCTTTGACCCAAAAAGAATGGATGACTTTCAGCTGAAGGGCATAGTAGAAGAGAAGTTTGTGAAGTGGGAATGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473856.5
3UTR GCA 90 bp CACTACTTGAATTACATTCCCACTTCACAAACTTCTCTTCTACTATaGCCTTCAGCTGAAAGTCATCCATTCTTTTTGGGTCAAAGCCTT +
Preference number: 1 (lower is better)
Translates to: HYLNYIPTSQTSLLL*PSAESHPFFLGQSL
Trigger: AAGGCTTTGACCCAAAAAGAATGGATGACTTTCAGCTGAAGGGCATAGTAGAAGAGAAGTTTGTGAAGTGGGAATGTAATTCAAGTAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473856.5
3UTR-3UTR TCA 90 bp CCAGGAGGCGGAGATTGTAGTGAGCCGAGATCACGCCGCTGTATTCCAGCCTGGGCAAGACTCCATCCTTaGGACAGCAGGATTGGCTGG +
Preference number: 2 (lower is better)
Translates to: PGGGDCSEPRSRRCIPAWARLHP*DSRIGW
Trigger: CCAGCCAATCCTGCTGTCTCAAGGATGGAGTCTTGC...CCAGGCTGGAATACAGCGGCGTGATCTCGGCTCACTACAATCTCCGCCTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527941.5
3UTR-3UTR GCA 90 bp GGAGAATCCCTTGAACCAGGAGGCGGAGATTGTAGTGAGCCGAGATCACGCCGCGCAGGATTGGCTGGTTaGTGTGCATCGGTAGACCAG +
Preference number: 2 (lower is better)
Translates to: GESLEPGGGDCSEPRSRRAGLAG*CASVDQ
Trigger: CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGC...GCGGCGTGATCTCGGCTCACTACAATCTCCGCCTCCTGGTTCAAGGGATTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527941.5
3UTR-3UTR TCA 90 bp GAGCCACTGGGCCTGGCCGTGATTTGTGATTCTTTCCTTCAAAACCTAGCAGTGTGCCAACTCTTGGGATaGATGAAGTCAGACTCACAG +
Preference number: 2 (lower is better)
Translates to: EPLGLAVICDSFLQNLAVCQLLG*MKSDSQ
Trigger: CTGTGAGTCTGACTTCATTCATCCCAAGAGTTGGCA...CACTGCTAGGTTTTGAAGGAAAGAATCACAAATCACGGCCAGGCCCAGTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355809.4
3UTR-3UTR CCA 90 bp GCTGCATTCTACCTCCACAATTGCAGCTTTCTTACCTGTAATCCCAGCTACTCAGACAGCAGGATTGGCTaGTTGCTGTGCATCGGTAGA +
Preference number: 2 (lower is better)
Translates to: AAFYLHNCSFLTCNPSYSDSRIG*LLCIGR
Trigger: TCTACCGATGCACAGCAACCAGCCAATCCTGCTGTC...TGAGTAGCTGGGATTACAGGTAAGAAAGCTGCAATTGTGGAGGTAGAATGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527941.5
3UTR-3UTR TCA 90 bp TCAGGTCTCCATATTTTAGCTGTCTTTCTTCTGCTGCATTCTACCTCCACAATTGGCAGGAGAATCCCTTaGACCAGGAGGCGGAGATTG +
Preference number: 2 (lower is better)
Translates to: SGLHILAVFLLLHSTSTIGRRIP*TRRRRL
Trigger: CAATCTCCGCCTCCTGGTTCAAGGGATTCTCCTGCC...AATTGTGGAGGTAGAATGCAGCAGAAGAAAGACAGCTAAAATATGGAGACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527941.5
3UTR-3UTR GCA 90 bp GAACTCAGGTCTCCATATTTTAGCTGTCTTTCTTCTGCTGCATTCTACCTCCACATTGGCTGGTTGCTGTaGATCGGTAGACCAGCTGAA +
Preference number: 2 (lower is better)
Translates to: ELRSPYFSCLSSAAFYLHIGWLL*IGRPAE
Trigger: TTCAGCTGGTCTACCGATGCACAGCAACCAGCCAAT...GTGGAGGTAGAATGCAGCAGAAGAAAGACAGCTAAAATATGGAGACCTGAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527941.5
3UTR-3UTR CCA 90 bp TTGAACTCAGGTCTCCATATTTTAGCTGTCTTTCTTCTGCTGCATTCTACCTCCTTGAGACAGCAGGATTaGCTGGTTGCTGTGCATCGG +
Preference number: 2 (lower is better)
Translates to: LNSGLHILAVFLLLHSTSLRQQD*LVAVHR
Trigger: CCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAA...GGAGGTAGAATGCAGCAGAAGAAAGACAGCTAAAATATGGAGACCTGAGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527941.5
3UTR-3UTR GCA 90 bp GGTCAAAGCCTTCAATCCAACTTCCAAGTAAGCAAGGAAGAAGAGGGGGTTTTCCACTTTTTCGATCTCTaGACACCACAACAGGAACTT +
Preference number: 2 (lower is better)
Translates to: GQSLQSNFQVSKEEEGVFHFFDL*TPQQEL
Trigger: AAGTTCCTGTTGTGGTGTGCAGAGATCGAAAAAGTG...GAAAACCCCCTCTTCTTCCTTGCTTACTTGGAAGTTGGATTGAAGGCTTTGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000473856.5
3UTR-3UTR TCA 90 bp TCCCCAGTGCCTATCAGAATACCTGGCACAAAACAAGTGCTCAGTGTCTATTTGGGAAGTAAGGAAAGATaGATGCAACCTCTGTCTTAT +
Preference number: 2 (lower is better)
Translates to: SPVPIRIPGTKQVLSVYLGSKER*MQPLSY
Trigger: ATAAGACAGAGGTTGCATTCATCTTTCCTTACTTCC...CAAATAGACACTGAGCACTTGTTTTGTGCCAGGTATTCTGATAGGCACTGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355809.4
3UTR-3UTR TCA 90 bp AGCAGCTCTAACCATAACTGTCCCAAGGATACCCGATTTGGTGTTTCCAATGCTATCAGAAGATCTGGATaGTTCATCTTGGGAGGAAAT +
Preference number: 2 (lower is better)
Translates to: SSSNHNCPKDTRFGVSNAIRRSG*FILGGN
Trigger: ATTTCCTCCCAAGATGAATCATCCAGATCTTCTGAT...AGCATTGGAAACACCAAATCGGGTATCCTTGGGACAGTTATGGTTAGAGCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473856.5
3UTR-3UTR GCA 90 bp CAAAAACAAAAGCAAGGGATAGACCATAGTTTGCCAACTCTTGGGATGAATGAAGTAAGGAAAGATGAATaGAACCTCTGTCTTATGAAT +
Preference number: 2 (lower is better)
Translates to: QKQKQGIDHSLPTLGMNEVRKDE*NLCLMN
Trigger: ATTCATAAGACAGAGGTTGCATTCATCTTTCCTTAC...TTCATTCATCCCAAGAGTTGGCAAACTATGGTCTATCCCTTGCTTTTGTTTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355809.4
3UTR-3UTR CAA 90 bp GAATCCCTTGAACCAGGAGGCGGAGATTGTAGTGAGCCGAGATCACGCCGCTGTAGCAAGACTCCATCCTaGAGACAGCAGGATTGGCTG +
Preference number: 3 (lower is better)
Translates to: ESLEPGGGDCSEPRSRRCSKTPS*RQQDWL
Trigger: CAGCCAATCCTGCTGTCTCAAGGATGGAGTCTTGCT...ACAGCGGCGTGATCTCGGCTCACTACAATCTCCGCCTCCTGGTTCAAGGGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527941.5
3UTR-3UTR CAA 90 bp TCAGGCTGGTCTCGAATTCCTGACCTCAAGCAACCTGCCCACCTCGGCTTCCCAGGGATAGACCATAGTTaGCCAACTCTTGGGATGAAT +
Preference number: 3 (lower is better)
Translates to: SGWSRIPDLKQPAHLGFPGIDHS*PTLGMN
Trigger: ATTCATCCCAAGAGTTGGCAAACTATGGTCTATCCC...TGGGAAGCCGAGGTGGGCAGGTTGCTTGAGGTCAGGAATTCGAGACCAGCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355809.4
3UTR GCA 72 bp GGTACGGATACCCTTGAGACAGCAGGATTGGCTGGTTaGTGTGCATCGGTAGACCAGCTGAAAGAAAATGGA +
Preference number: 3 (lower is better)
Translates to: GTDTLETAGLAG*CASVDQLKENG
Trigger: TCCATTTTCTTTCAGCTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
3UTR-3UTR CAA 90 bp GCTGCATTCTACCTCCACAATTGCAGCTTTCTTACCTGTAATCCCAGCTACTCAAGGCAGGAGAATCCCTaGAACCAGGAGGCGGAGATT +
Preference number: 3 (lower is better)
Translates to: AAFYLHNCSFLTCNPSYSRQENP*NQEAEI
Trigger: AATCTCCGCCTCCTGGTTCAAGGGATTCTCCTGCCT...TGAGTAGCTGGGATTACAGGTAAGAAAGCTGCAATTGTGGAGGTAGAATGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527941.5
3UTR GCA 72 bp CAAGACTCCATCCTTGAGACAGCAGGATTGGCTGGTTaGTGTGCATCGGTAGACCAGCTGAAAGAAAATGGA +
Preference number: 3 (lower is better)
Translates to: QDSILETAGLAG*CASVDQLKENG
Trigger: TCCATTTTCTTTCAGCTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGATGGAGTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527941.5
3UTR-3UTR CAA 90 bp TTTAGCTGTCTTTCTTCTGCTGCATTCTACCTCCACAATTGCAGCTTTCTTACCAGCAGGATTGGCTGGTaGCTGTGCATCGGTAGACCA +
Preference number: 3 (lower is better)
Translates to: FSCLSSAAFYLHNCSFLTSRIGW*LCIGRP
Trigger: TGGTCTACCGATGCACAGCAACCAGCCAATCCTGCT...GGTAAGAAAGCTGCAATTGTGGAGGTAGAATGCAGCAGAAGAAAGACAGCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527941.5
3UTR-3UTR CAA 90 bp TCAGGTCTCCATATTTTAGCTGTCTTTCTTCTGCTGCATTCTACCTCCACAATTCTTGAGACAGCAGGATaGGCTGGTTGCTGTGCATCG +
Preference number: 3 (lower is better)
Translates to: SGLHILAVFLLLHSTSTILETAG*AGCCAS
Trigger: CGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAG...AATTGTGGAGGTAGAATGCAGCAGAAGAAAGACAGCTAAAATATGGAGACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527941.5
3UTR GCA 72 bp AGCTGTCTTTCTTCTGCTGCATTCTACCTCCACAATTaGAGCTTTCTTACCTGTAATCCCAGCTACTCAGGA +
Preference number: 3 (lower is better)
Translates to: SCLSSAAFYLHN*SFLTCNPSYSG
Trigger: TCCTGAGTAGCTGGGATTACAGGTAAGAAAGCTGCAATTGTGGAGGTAGAATGCAGCAGAAGAAAGACAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527941.5
3UTR-3UTR CAA 90 bp AGCAGCTCTAACCATAACTGTCCCAAGGATACCCGATTTGGTGTTTCCAATGCTAGTCATCCATTCTTTTaGGGTCAAAGCCTTCAATCC +
Preference number: 3 (lower is better)
Translates to: SSSNHNCPKDTRFGVSNASHPFF*GQSLQS
Trigger: GGATTGAAGGCTTTGACCCAAAAAGAATGGATGACT...AGCATTGGAAACACCAAATCGGGTATCCTTGGGACAGTTATGGTTAGAGCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473856.5
3UTR CCA 72 bp TTTCACCAATACATCCCCAGTGCCTATCAGAATACCTaGCACAAAACAAGTGCTCAGTGTCTATTTGATGAG +
Preference number: 3 (lower is better)
Translates to: FHQYIPSAYQNT*HKTSAQCLFDE
Trigger: CTCATCAAATAGACACTGAGCACTTGTTTTGTGCCAGGTATTCTGATAGGCACTGGGGATGTATTGGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355809.4
3UTR CCA 72 bp TTGTCTGTTTCTGTCTTCTTGGTATCATCTTTTGGTTaGTCTGCCTTAGCTTTGTTTTCCTCAGCAATTGAG +
Preference number: 3 (lower is better)
Translates to: LSVSVFLVSSFG*SALALFSSAIE
Trigger: CTCAATTGCTGAGGAAAACAAAGCTAAGGCAGACCAACCAAAAGATGATACCAAGAAGACAGAAACAGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473856.5
3UTR-3UTR CAA 90 bp TATCCGTACACATATGACATATTCCTCCAAAGCAAAATCCAGTGTGTAGAATTTTGGTCTGCCTTAGCTTaGTTTTCCTCAGCAATTGAG +
Preference number: 3 (lower is better)
Translates to: YPYTYDIFLQSKIQCVEFWSALA*FSSAIE
Trigger: CTCAATTGCTGAGGAAAACAAAGCTAAGGCAGACCA...AAATTCTACACACTGGATTTTGCTTTGGAGGAATATGTCATATGTGTACGGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000473856.5
3UTR-3UTR CAA 90 bp TATCCGTACACATATGACATATTCCTCCAAAGCAAAATCCAGTGTGTAGAATTTAAGACAGGTTCTATTTaGCCAAGGGCAGTAAGTAAA +
Preference number: 3 (lower is better)
Translates to: YPYTYDIFLQSKIQCVEFKTGSI*PRAVSK
Trigger: TTTACTTACTGCCCTTGGCAAAATAGAACCTGTCTT...AAATTCTACACACTGGATTTTGCTTTGGAGGAATATGTCATATGTGTACGGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473856.5
3UTR-3UTR CAA 90 bp TATCCGTACACATATGACATATTCCTCCAAAGCAAAATCCAGTGTGTAGAATTTTGTTTTCCTCAGCAATaGAGTTTTTCTCAGTTGCAC +
Preference number: 3 (lower is better)
Translates to: YPYTYDIFLQSKIQCVEFCFPQQ*SFSQLH
Trigger: GTGCAACTGAGAAAAACTCAATTGCTGAGGAAAACA...AAATTCTACACACTGGATTTTGCTTTGGAGGAATATGTCATATGTGTACGGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGGTCTGGCAGCAGGCTaGTGGGGAGGTTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQGLAAG*WGGWAP
Trigger: GGGAGCCCAACCTCCCCATCAGCCTGCTGCCAGACC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494469.5
CDS-3UTR CCA 90 bp CCAGGAGGCGGAGATTGTAGTGAGCCGAGATCACGCCGCTGTATTCCAGCCTGGGGGACAAGGGGGAAATaGGGACGCGGTGCATGTTCC +
Preference number: 4 (lower is better)
Translates to: PGGGDCSEPRSRRCIPAWGTRGK*GRGACS
Trigger: GGAACATGCACCGCGTCCCCATTTCCCCCTTGTCCC...CCAGGCTGGAATACAGCGGCGTGATCTCGGCTCACTACAATCTCCGCCTCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527941.5
CDS-3UTR TCA 90 bp CCAGGAGGCGGAGATTGTAGTGAGCCGAGATCACGCCGCTGTATTCCAGCCTGGGGCAGGAGAATCCCTTaGACCAGGAGGCGGAGATTG +
Preference number: 4 (lower is better)
Translates to: PGGGDCSEPRSRRCIPAWGRRIP*TRRRRL
Trigger: CAATCTCCGCCTCCTGGTTCAAGGGATTCTCCTGCC...CCAGGCTGGAATACAGCGGCGTGATCTCGGCTCACTACAATCTCCGCCTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527941.5
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGGGGGCACTGCCTGGTaGAGAGTGGATCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQGGTAW*RVDHWA
Trigger: GGCCCAGTGATCCACTCTGCACCAGGCAGTGCCCCC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTCACTGGGCCATGGATaGGCCAGGACGGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQSLGHG*ARTGQG
Trigger: TCCCTGCCCCGTCCTGGCCCATCCATGGCCCAGTGA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTCTGACGGGCCAGCTTaGCCTCTGGGCACTCCCTTC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQSDGPA*PLGTPF
Trigger: GAAGGGAGTGCCCAGAGGTCAAGCTGGCCCGTCAGA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGAGTGGCATCTGGACCTaGTGGGGAGGTTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQSGIWT*WGGWAP
Trigger: GGGAGCCCAACCTCCCCATCAGGTCCAGATGCCACT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCATCTCAGTGGCTCCTaGTCTCCCTCCGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQHLSGS*SPSASC
Trigger: GCAGGAGGCGGAGGGAGAGCAGGAGCCACTGAGATG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTGGATCACTGGGCCATaGATGGGCCAGGACGGGGCA +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQWITGP*MGQDGA
Trigger: TGCCCCGTCCTGGCCCATCCATGGCCCAGTGATCCA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGGGCTGCTGCCACACTaGTATTCCTCTGACGGGCCA +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQGLLPH*YSSDGP
Trigger: TGGCCCGTCAGAGGAATAGCAGTGTGGCAGCAGCCC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGCGGACCAGCTGGGCTaGTGCCACACTGCTATTCCT +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQADQLG*CHTAIP
Trigger: AGGAATAGCAGTGTGGCAGCAGCCCAGCTGGTCCGC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGAGGTTGCGGACCAGCTaGGCTGCTGCCACACTGCTA +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQRLRTS*AAATLL
Trigger: TAGCAGTGTGGCAGCAGCCCAGCTGGTCCGCAACCT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGGCTCCCTGCTGAGGTaGGCCAAGCTTAGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQGSLLR*AKLRLG
Trigger: TCCCAACCTAAGCTTGGCCCACCTCAGCAGGGAGCC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGACGGGGCAGGGATCTaGAGAGGGTGCATTGGCAAC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQDGAGI*RGCIGN
Trigger: GTTGCCAATGCACCCTCTCCAGATCCCTGCCCCGTC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp CCAGGAGGCGGAGATTGTAGTGAGCCGAGATCACGCCGCTGTATTCCAGCCTGGGTTTACCAGGGAATTTaGAGCCACAGTACGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PGGGDCSEPRSRRCIPAWVYQGI*SHSTGP
Trigger: TGGCCCCGTACTGTGGCTCCAAATTCCCTGGTAAAC...CCAGGCTGGAATACAGCGGCGTGATCTCGGCTCACTACAATCTCCGCCTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527941.5
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGGGACAAGGGGGAAATaGGGACGCGGTGCATGTTCC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQGTRGK*GRGACS
Trigger: GGAACATGCACCGCGTCCCCATTTCCCCCTTGTCCC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGGATTGCCACAGGTCTaGCAGCAGGCTGATGGGGAG +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQGLPQV*QQADGE
Trigger: CTCCCCATCAGCCTGCTGCCAGACCTGTGGCAATCC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494469.5
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGACCCTGTTGCTGAGCTaGACCAGCCACCTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQTLLLS*TSHLLS
Trigger: GCTCAACAGGTGGCTGGTTCAGCTCAGCAACAGGGT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGGCCAGTGTCCATCGTaGGACGTGTTAGGGATTGCC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQGQCPS*DVLGIA
Trigger: GGCAATCCCTAACACGTCTCACGATGGACACTGGCC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS-3UTR TCA 90 bp GAATCCCTTGAACCAGGAGGCGGAGATTGTAGTGAGCCGAGATCACGCCGCTGTGCAAGACTCCATCCTTaGGACAGCAGGATTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ESLEPGGGDCSEPRSRRCARLHP*DSRIGW
Trigger: CCAGCCAATCCTGCTGTCTCAAGGATGGAGTCTTGC...ACAGCGGCGTGATCTCGGCTCACTACAATCTCCGCCTCCTGGTTCAAGGGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527941.5
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGGCAGGGGAAGGAGGTaGCAGAGAACGAAGCTCACT +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQGRGRR*QRTKLT
Trigger: AGTGAGCTTCGTTCTCTGCCACCTCCTTCCCCTGCC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGGCCAGCTTGACCTCTaGGCACTCCCTTCGTACATG +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQGQLDL*ALPSYM
Trigger: CATGTACGAAGGGAGTGCCCAGAGGTCAAGCTGGCC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCTGCCTGGTGCAGAGTaGATCACTGGGCCATGGATG +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQLPGAE*ITGPWM
Trigger: CATCCATGGCCCAGTGATCCACTCTGCACCAGGCAG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCGACACGTTTCCTCTTaGTGGGTGGGGACAACGCTC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQRHVSS*WVGTTL
Trigger: GAGCGTTGTCCCCACCCACCAAGAGGAAACGTGTCG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGACACTGCTATTCCTCTaGCGGGCCAGCTTGACCTCT +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQTLLFL*RASLTS
Trigger: AGAGGTCAAGCTGGCCCGTCAGAGGAATAGCAGTGT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTGCATGGGAGAATACTaGGCTGGTGGTGACTGGGGA +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQCMGEY*AGGDWG
Trigger: TCCCCAGTCACCACCAGCTCAGTATTCTCCCATGCA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGAGGTACGGATACCCTTaGGACAGCAGGATTGGCTGG +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQRYGYP*DSRIGW
Trigger: CCAGCCAATCCTGCTGTCTCAAGGGTATCCGTACCT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGAGCATTTACAAGGTTaGGGACCAGCTGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQEHLQG*GPAGLL
Trigger: CAGCAGCCCAGCTGGTCCGCAACCTTGTAAATGCTC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTATTGCTGGGGGCACTaGCTGGTGCAGAGTGGATCA +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQYCWGH*LVQSGS
Trigger: TGATCCACTCTGCACCAGGCAGTGCCCCCAGCAATA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGAGACGTGTTAGGGATTaGCACAGGTCTGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQRRVRD*HRSGSR
Trigger: CCTGCTGCCAGACCTGTGGCAATCCCTAACACGTCT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGCAGGATTGGCTGGTTaGTGTGCATCGGTAGACCAG +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQAGLAG*CASVDQ
Trigger: CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTTAGGCCAATATTGCTaGGGGCACTGCCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQLGQYC*GHCLVQ
Trigger: CTGCACCAGGCAGTGCCCCCAGCAATATTGGCCTAA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGGATTGCCACAGGTCTaGCAGCAGGCTGTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQGLPQV*QQAVQR
Trigger: TCTTTGCACAGCCTGCTGCCAGACCTGTGGCAATCC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGATAAGGCCACGAAGCTaGGACAAGGGGGAAATGGGG +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQIRPRS*DKGEMG
Trigger: CCCCATTTCCCCCTTGTCCCAGCTTCGTGGCCTTAT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCACGTTTCCTCTTGGTaGGTGGGGACAACGCTCTCT +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQHVSSW*VGTTLS
Trigger: AGAGAGCGTTGTCCCCACCCACCAAGAGGAAACGTG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS-3UTR TCA 90 bp TCAGGCTGGTCTCGAATTCCTGACCTCAAGCAACCTGCCCACCTCGGCTTCCCACATGTCTGTTGCTTCTaGGATCGTGGTGAGTTTTGC +
Preference number: 4 (lower is better)
Translates to: SGWSRIPDLKQPAHLGFPHVCCF*DRGEFC
Trigger: GCAAAACTCACCACGATCTCAGAAGCAACAGACATG...TGGGAAGCCGAGGTGGGCAGGTTGCTTGAGGTCAGGAATTCGAGACCAGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355809.4
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGCTGGTAGAAAGAGATaGAGAGTCCTGTCCGTGGTC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQAGRKR*RVLSVV
Trigger: GACCACGGACAGGACTCTTCATCTCTTTCTACCAGC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGAACCAGCCACCTGTTaGGCATTTACAAGGTTGCGG +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQEPATC*AFTRLR
Trigger: CCGCAACCTTGTAAATGCTCAACAGGTGGCTGGTTC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGGATCCTGGCTGAGATaGAGGCTGAGTAATAGCAGC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQGSWLR*RLSNSS
Trigger: GCTGCTATTACTCAGCCTTCATCTCAGCCAGGATCC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCATTTAGGCCAATATTaGTGGGGGCACTGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQHLGQY*WGHCLV
Trigger: CACCAGGCAGTGCCCCCAGCAATATTGGCCTAAATG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTCTGGCAGCAGGCTGTaGAAAGATGATGCTGGGATC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQSGSRL*KDDAGI
Trigger: GATCCCAGCATCATCTTTGCACAGCCTGCTGCCAGA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGAAATGGGGACGCGGTaGATGTTCCCAAGGAATTGG +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQEMGTR*MFPRNW
Trigger: CCAATTCCTTGGGAACATGCACCGCGTCCCCATTTC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGAAGTCTCGAGTATCGTaGAGGTCTCGGGGGTCAAGA +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQKSRVS*RSRGSR
Trigger: TCTTGACCCCCGAGACCTCCACGATACTCGAGACTT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGTTTACCAGGGAATTTaGAGCCACAGTACGGGGCCA +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQVYQGI*SHSTGP
Trigger: TGGCCCCGTACTGTGGCTCCAAATTCCCTGGTAAAC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTTTCCTCTTGGTGGGTaGGGACAACGCTCTCTACAC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQFPLGG*GQRSLH
Trigger: GTGTAGAGAGCGTTGTCCCCACCCACCAAGAGGAAA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGACAGCAGGATTGGCTaGTTGCTGTGCATCGGTAGA +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQDSRIG*LLCIGR
Trigger: TCTACCGATGCACAGCAACCAGCCAATCCTGCTGTC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS-3UTR CCA 90 bp GACTCCATCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGACAGCAGGATTGGCTaGTTGCTGTGCATCGGTAGA +
Preference number: 4 (lower is better)
Translates to: DSILETAGLAGCCASVDQDSRIG*LLCIGR
Trigger: TCTACCGATGCACAGCAACCAGCCAATCCTGCTGTC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGATGGAGTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527941.5
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTTGAGACAGCAGGATTaGCTGGTTGCTGTGCATCGG +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQLRQQD*LVAVHR
Trigger: CCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS-3UTR TCA 90 bp TCAGGCTGGTCTCGAATTCCTGACCTCAAGCAACCTGCCCACCTCGGCTTCCCACTTCTGAGATCGTGGTaGGTTTTGCAGAGCACATTT +
Preference number: 4 (lower is better)
Translates to: SGWSRIPDLKQPAHLGFPLLRSW*VLQSTF
Trigger: AAATGTGCTCTGCAAAACTCACCACGATCTCAGAAG...TGGGAAGCCGAGGTGGGCAGGTTGCTTGAGGTCAGGAATTCGAGACCAGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355809.4
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTCCTCCACAATTTCCTaGCGGACTCTGAGGTCATCA +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQSSTIS*RTLRSS
Trigger: TGATGACCTCAGAGTCCGTCAGGAAATTGTGGAGGA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTTTCCACCCTTCGTCTaGGGACAGGCAAAATACCGA +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQFPPFV*GQAKYR
Trigger: TCGGTATTTTGCCTGTCCTCAGACGAAGGGTGGAAA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCTGAGTAATAGCAGCTaGCTGGGAAGAGTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQLSNSS*LGRVLW
Trigger: CCACAGAACTCTTCCCAGTCAGCTGCTATTACTCAG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCAGGCTGTGCAAAGATaGTGCTGGGATCATTTAGGC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQQAVQR*CWDHLG
Trigger: GCCTAAATGATCCCAGCATCATCTTTGCACAGCCTG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR GCA 90 bp TCAGGCTGGTCTCGAATTCCTGACCTCAAGCAACCTGCCCACCTCGGCTTCCCAGATCGTGGTGAGTTTTaGAGAGCACATTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SGWSRIPDLKQPAHLGFPDRGEF*RAHFSP
Trigger: GGGAGAAAAATGTGCTCTGCAAAACTCACCACGATC...TGGGAAGCCGAGGTGGGCAGGTTGCTTGAGGTCAGGAATTCGAGACCAGCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355809.4
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTTCAACCCCAGCCTCTaGTCAGGTGTCAATGCAGAT +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQFNPSL*SGVNAD
Trigger: ATCTGCATTGACACCTGAGCAGAGGCTGGGGTTGAA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGGGATCTGGAGAGGGTaGATTGGCAACAATCCCATA +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQGIWRG*IGNNPI
Trigger: TATGGGATTGTTGCCAATGCACCCTCTCCAGATCCC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGATTGGCTGGTTGCTGTaGATCGGTAGACCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQIGWLL*IGRPAE
Trigger: TTCAGCTGGTCTACCGATGCACAGCAACCAGCCAAT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGGGAAAGTTATACAGTaGCATCTGGACCTGATGGGG +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQGKVIQ*HLDLMG
Trigger: CCCCATCAGGTCCAGATGCCACTGTATAACTTTCCC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCTCTACACCGACGGGTaGCACATCTGTCTTGAGTAT +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQLYTDG*HICLEY
Trigger: ATACTCAAGACAGATGTGCCACCCGTCGGTGTAGAG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCATGTCTGTTGCTTCTaGGATCGTGGTGAGTTTTGC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQHVCCF*DRGEFC
Trigger: GCAAAACTCACCACGATCTCAGAAGCAACAGACATG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTCGGTGCACACACTCTaGTGTGAACTCTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQSVHTL*CELSVS
Trigger: AGAAACAGAGAGTTCACATCAGAGTGTGTGCACCGA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCAGCTTCTCTGCCAATaGGTGGATAAAAAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQQLLCQ*VDKKGY
Trigger: GTACCCCTTTTTATCCACTCATTGGCAGAGAAGCTG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGATACTGAGCTGGTGGTaGCTGGGGAAAGTTATACAG +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQILSWW*LGKVIQ
Trigger: CTGTATAACTTTCCCCAGTCACCACCAGCTCAGTAT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGGTGGCTTTCTCTGCTaGAGAAAGTACAGCACCATA +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQGGFLC*RKYSTI
Trigger: TATGGTGCTGTACTTTCTGCAGCAGAGAAAGCCACC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCTGGAGAGGGTGCATTaGCAACAATCCCATATTGTG +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQLERVH*QQSHIV
Trigger: CACAATATGGGATTGTTGCCAATGCACCCTCTCCAG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCTTCTGAGATCGTGGTaGGTTTTGCAGAGCACATTT +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQLLRSW*VLQSTF
Trigger: AAATGTGCTCTGCAAAACTCACCACGATCTCAGAAG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTTTCCTGACGGACTCTaGGGTCATCATCTGTTATTC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQFPDGL*GHHLLF
Trigger: GAATAACAGATGATGACCTCAGAGTCCGTCAGGAAA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCCAGCACCAAGGTTATaGTTCAAGTCAAAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQPAPRL*FKSKGS
Trigger: AGACCCTTTTGACTTGAATCATAACCTTGGTGCTGG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR TCA 90 bp GCATTCTACCTCCACAATTGCAGCTTTCTTACCTGTAATCCCAGCTACTCAGGAGGCCAGTGTCCATCGTaGGACGTGTTAGGGATTGCC +
Preference number: 4 (lower is better)
Translates to: AFYLHNCSFLTCNPSYSGGQCPS*DVLGIA
Trigger: GGCAATCCCTAACACGTCTCACGATGGACACTGGCC...TCCTGAGTAGCTGGGATTACAGGTAAGAAAGCTGCAATTGTGGAGGTAGAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527941.5
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGATCGTGGTGAGTTTTaGAGAGCACATTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQDRGEF*RAHFSP
Trigger: GGGAGAAAAATGTGCTCTGCAAAACTCACCACGATC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCCTTTTTGCAGATGCTaGATACTATCGTTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQPFCRC*ILSLVA
Trigger: AGCCACCAACGATAGTATGCAGCATCTGCAAAAAGG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGGTCTTCAATTGCAATaGACTTGGAAGTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQGLQLQ*TWKSTA
Trigger: AGCAGTGGACTTCCAAGTGCATTGCAATTGAAGACC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR GCA 90 bp TCAGGCTGGTCTCGAATTCCTGACCTCAAGCAACCTGCCCACCTCGGCTTCCCATGTCTATTTGATGAGTaGCTAAATCAGAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: SGWSRIPDLKQPAHLGFPCLFDE*LNQRSA
Trigger: TGCTGACCTCTGATTTAGGCACTCATCAAATAGACA...TGGGAAGCCGAGGTGGGCAGGTTGCTTGAGGTCAGGAATTCGAGACCAGCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355809.4
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGAAGAGTCCTGTCCGTaGTCAGCAAAATCTAGTTCA +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQEESCP*SAKSSS
Trigger: TGAACTAGATTTTGCTGACCACGGACAGGACTCTTC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGAAGATAAACTTCCCCTaGAAGCATCCCCAATGTCAC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQKINFP*KHPQCH
Trigger: GTGACATTGGGGATGCTTCCAGGGGAAGTTTATCTT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGAACTGGGATAACAGGTaGCTTTCTCTGCTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQNWDNR*LSLLQK
Trigger: TTTCTGCAGCAGAGAAAGCCACCTGTTATCCCAGTT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGATGTTCCCAAGGAATTaGAGGAGTCAGTCCTCGAAA +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQMFPRN*RSQSSK
Trigger: TTTCGAGGACTGACTCCTCCAATTCCTTGGGAACAT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCCAGCTGAAAGAAAATaGACTCGCATTACTCCGACA +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQPAERK*TRITPT
Trigger: TGTCGGAGTAATGCGAGTCCATTTTCTTTCAGCTGG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS-3UTR CCA 90 bp GACTCCATCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCCAGCTGAAAGAAAATaGACTCGCATTACTCCGACA +
Preference number: 4 (lower is better)
Translates to: DSILETAGLAGCCASVDQPAERK*TRITPT
Trigger: TGTCGGAGTAATGCGAGTCCATTTTCTTTCAGCTGG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGATGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527941.5
3UTR CAA 72 bp CTGCTGAATGTAACTGACATTGAGGTACGGATACCCTaGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGG +
Preference number: 4 (lower is better)
Translates to: LLNVTDIEVRIP*RQQDWLVAVHR
Trigger: CCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGTACCTCAATGTCAGTTACATTCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCTCAGTTGCACTACTTaGATTACATTCCCACTTCAC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQLSCTT*ITFPLH
Trigger: GTGAAGTGGGAATGTAATTCAAGTAGTGCAACTGAG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTGGGCAATCATTCTTTaGATGGCCATCCTTTTTGCA +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQWAIIL*MAILFA
Trigger: TGCAAAAAGGATGGCCATTCAAAGAATGATTGCCCA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR TCA 90 bp TCCCCAGTGCCTATCAGAATACCTGGCACAAAACAAGTGCTCAGTGTCTATTTGCTGGTCTCGAATTCCTaGCCTCAAGCAACCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SPVPIRIPGTKQVLSVYLLVSNS*PQATCP
Trigger: TGGGCAGGTTGCTTGAGGTCAGGAATTCGAGACCAG...CAAATAGACACTGAGCACTTGTTTTGTGCCAGGTATTCTGATAGGCACTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355809.4
CDS-3UTR GCA 90 bp ATATCGTTTCCTGCACTCACTCTACAAAGTAAACCACTTTTTCGATCTCTGCACCATCTCAGTGGCTCCTaGTCTCCCTCCGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: ISFPALTLQSKPLFRSLHHLSGS*SPSASC
Trigger: GCAGGAGGCGGAGGGAGAGCAGGAGCCACTGAGATG...GTGCAGAGATCGAAAAAGTGGTTTACTTTGTAGAGTGAGTGCAGGAAACGATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCTGCTCAGGTGTCAATaGAGATTCATCTATCACAGT +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQLLRCQ*RFIYHS
Trigger: ACTGTGATAGATGAATCTGCATTGACACCTGAGCAG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCACTTTTTCGATCTCTaGACACCACAACAGGAACTT +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQHFFDL*TPQQEL
Trigger: AAGTTCCTGTTGTGGTGTGCAGAGATCGAAAAAGTG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGATCAGTAGTGAGACATaGCATATCGTTTCCTGCACT +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQISSET*HIVSCT
Trigger: AGTGCAGGAAACGATATGGCATGTCTCACTACTGAT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCATCCTTTTTGCAGATaGTGCATACTATCGTTGGTG +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQHPFCR*CILSLV
Trigger: CACCAACGATAGTATGCAGCATCTGCAAAAAGGATG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGAATGGCCATCCTTTTTaGAGATGCTGCATACTATCG +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQNGHPF*RCCILS
Trigger: CGATAGTATGCAGCATCTGCAAAAAGGATGGCCATT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCACTTGGAAGTCCACTaGTTCTCAAAAGTTGTCAAC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQHLEVH*FSKVVN
Trigger: GTTGACAACTTTTGAGAAGCAGTGGACTTCCAAGTG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCAAATCTTTAGGACCTaGAAGGTTGGCAGCATTTAC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQQIFRT*KVGSIY
Trigger: GTAAATGCTGCCAACCTTCCAGGTCCTAAAGATTTG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCTTTCAACAGTAAACTaGGTCCCTTTTCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQLSTVN*VPFLLL
Trigger: CAGAAGCAGAAAAGGGACCCAGTTTACTGTTGAAAG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTCCAGTAGATTTATCTaGGTCAGGCGACTTAGACAA +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQSSRFI*VRRLRQ
Trigger: TTGTCTAAGTCGCCTGACCCAGATAAATCTACTGGA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGTAATAGCAGCTGACTaGGAAGAGTTCTGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQVIAAD*EEFCGN
Trigger: ATTTCCACAGAACTCTTCCCAGTCAGCTGCTATTAC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS-3UTR CCA 90 bp CTTCTGCTGCATTCTACCTCCACAATTGCAGCTTTCTTACCTGTAATCCCAGCTATAAGGCCACGAAGCTaGGACAAGGGGGAAATGGGG +
Preference number: 4 (lower is better)
Translates to: LLLHSTSTIAAFLPVIPAIRPRS*DKGEMG
Trigger: CCCCATTTCCCCCTTGTCCCAGCTTCGTGGCCTTAT...AGCTGGGATTACAGGTAAGAAAGCTGCAATTGTGGAGGTAGAATGCAGCAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527941.5
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTATAGAAAGGTTTGTTaGGCTGGAATCGGGCATTTC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQYRKVC*AGIGHF
Trigger: GAAATGCCCGATTCCAGCCCAACAAACCTTTCTATA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTCAAGTCGAAAGATGTaGTCTCTTTCTAAGCGTTCT +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQSSRKM*SLSKRS
Trigger: AGAACGCTTAGAAAGAGATCACATCTTTCGACTTGA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGATCAGAAGATCTGGATaGTTCATCTTGGGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQIRRSG*FILGGN
Trigger: ATTTCCTCCCAAGATGAATCATCCAGATCTTCTGAT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGTTTTCCTCAGCAATTaGGTTTTTCTCAGTTGCACT +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQVFLSN*VFLSCT
Trigger: AGTGCAACTGAGAAAAACTCAATTGCTGAGGAAAAC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGAACATTCCTCTTGACTaGAAATGGATCTTCAATGGC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQNIPLD*KWIFNG
Trigger: GCCATTGAAGATCCATTTTCAGTCAAGAGGAATGTT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTCCATTTCATCACATTaGACAGGTTGCTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQSISSH*TGCSLS
Trigger: AGAAAGAGAGCAACCTGTTCAATGTGATGAAATGGA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR TCA 90 bp GAGCCACTGGGCCTGGCCGTGATTTGTGATTCTTTCCTTCAAAACCTAGCAGTGCCTGGCCGTGATTTGTaGTTCTTTCCTTCAAAACCT +
Preference number: 4 (lower is better)
Translates to: EPLGLAVICDSFLQNLAVPGRDL*FFPSKP
Trigger: AGGTTTTGAAGGAAAGAATCACAAATCACGGCCAGG...CACTGCTAGGTTTTGAAGGAAAGAATCACAAATCACGGCCAGGCCCAGTGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355809.4
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGACTTCTCTTCTACTATaGCCTTCAGCTGAAAGTCAT +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQTSLLL*PSAESH
Trigger: ATGACTTTCAGCTGAAGGGCATAGTAGAAGAGAAGT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGATCTTTTGGTTGGTCTaGCTTAGCTTTGTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQIFWLV*LSFVFL
Trigger: GAGGAAAACAAAGCTAAGGCAGACCAACCAAAAGAT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGAAAATACCGATAAGCTaGCCTAAATCTCTCCACAAC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQKIPIS*PKSLHN
Trigger: GTTGTGGAGAGATTTAGGGCAGCTTATCGGTATTTT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGAAAAGGGTCTTCAATTaGAATGCACTTGGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQKRVFN*NALGSP
Trigger: TGGACTTCCAAGTGCATTGCAATTGAAGACCCTTTT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR GCA 90 bp GCATTCTACCTCCACAATTGCAGCTTTCTTACCTGTAATCCCAGCTACTCAGGAGAAATGGGGACGCGGTaGATGTTCCCAAGGAATTGG +
Preference number: 4 (lower is better)
Translates to: AFYLHNCSFLTCNPSYSGEMGTR*MFPRNW
Trigger: CCAATTCCTTGGGAACATGCACCGCGTCCCCATTTC...TCCTGAGTAGCTGGGATTACAGGTAAGAAAGCTGCAATTGTGGAGGTAGAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527941.5
CDS-3UTR GCA 90 bp GAACTCAGGTCTCCATATTTTAGCTGTCTTTCTTCTGCTGCATTCTACCTCCACGCAGGATTGGCTGGTTaGTGTGCATCGGTAGACCAG +
Preference number: 4 (lower is better)
Translates to: ELRSPYFSCLSSAAFYLHAGLAG*CASVDQ
Trigger: CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGC...GTGGAGGTAGAATGCAGCAGAAGAAAGACAGCTAAAATATGGAGACCTGAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527941.5
CDS-3UTR CCA 90 bp TCAGGCTGGTCTCGAATTCCTGACCTCAAGCAACCTGCCCACCTCGGCTTCCCAACTACTATTCCTATTTaGAGAGCTGTTCTCAATTTC +
Preference number: 4 (lower is better)
Translates to: SGWSRIPDLKQPAHLGFPTTIPI*RAVLNF
Trigger: GAAATTGAGAACAGCTCTCCAAATAGGAATAGTAGT...TGGGAAGCCGAGGTGGGCAGGTTGCTTGAGGTCAGGAATTCGAGACCAGCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355809.4
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGTCATCCATTCTTTTTaGGTCAAAGCCTTCAATCCA +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQVIHSF*VKAFNP
Trigger: TGGATTGAAGGCTTTGACCCAAAAAGAATGGATGAC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCTTGGTATCATCTTTTaGTTGGTCTGCCTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQLGIIF*LVCLSF
Trigger: AAAGCTAAGGCAGACCAACCAAAAGATGATACCAAG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGCAGAATACAACCATTaGTTGCCATATTGTTCGACT +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQAEYNH*LPYCST
Trigger: AGTCGAACAATATGGCAACCAATGGTTGTATTCTGC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGAATTGGTCATTTTTCTaGAAACTCCAGCACCAAGGT +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQNWSFF*KLQHQG
Trigger: ACCTTGGTGCTGGAGTTTCCAGAAAAATGACCAATT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTTCTCTGCCAATGAGTaGATAAAAAGGGGTACCAAA +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQFSANE*IKRGTK
Trigger: TTTGGTACCCCTTTTTATCCACTCATTGGCAGAGAA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp GCTGCATTCTACCTCCACAATTGCAGCTTTCTTACCTGTAATCCCAGCTACTCATTTCCTCTTGGTGGGTaGGGACAACGCTCTCTACAC +
Preference number: 4 (lower is better)
Translates to: AAFYLHNCSFLTCNPSYSFPLGG*GQRSLH
Trigger: GTGTAGAGAGCGTTGTCCCCACCCACCAAGAGGAAA...TGAGTAGCTGGGATTACAGGTAAGAAAGCTGCAATTGTGGAGGTAGAATGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527941.5
CDS-3UTR CCA 90 bp GAGCCACTGGGCCTGGCCGTGATTTGTGATTCTTTCCTTCAAAACCTAGCAGTGGCCTATCAGAATACCTaGCACAAAACAAGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: EPLGLAVICDSFLQNLAVAYQNT*HKTSAQ
Trigger: CTGAGCACTTGTTTTGTGCCAGGTATTCTGATAGGC...CACTGCTAGGTTTTGAAGGAAAGAATCACAAATCACGGCCAGGCCCAGTGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355809.4
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGACTTGGTACTTTTTCTaGCTTCATCTGATAACTGGA +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQTWYFF*LHLITG
Trigger: TCCAGTTATCAGATGAAGTCAGAAAAAGTACCAAGT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCTTTTGCTAATTCAATaGCTGCAACACTTAAAGCAG +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQLLLIQ*LQHLKQ
Trigger: CTGCTTTAAGTGTTGCAGTCATTGAATTAGCAAAAG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTGTCGTTATAACCTTTaGCATTTCCTCCACAATTTC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQCRYNL*HFLHNF
Trigger: GAAATTGTGGAGGAAATGTCAAAGGTTATAACGACA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCCATATTGTTCGACTTaGCTGGTTTCTTATTGCTTA +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQPYCST*LVSYCL
Trigger: TAAGCAATAAGAAACCAGTCAAGTCGAACAATATGG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR TCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGACGTATTATATAAACTaGTATCGCCTTCTAACCCAC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQTYYIN*YRLLTH
Trigger: GTGGGTTAGAAGGCGATATCAGTTTATATAATACGT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTCCAGTAGTTTAAATTaGTTCAAGTCCAGTTTAGGC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQSSSLN*FKSSLG
Trigger: GCCTAAACTGGACTTGAAGCAATTTAAACTACTGGA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR GCA 90 bp TCCCCAGTGCCTATCAGAATACCTGGCACAAAACAAGTGCTCAGTGTCTATTTGTTCAACCCCAGCCTCTaGTCAGGTGTCAATGCAGAT +
Preference number: 4 (lower is better)
Translates to: SPVPIRIPGTKQVLSVYLFNPSL*SGVNAD
Trigger: ATCTGCATTGACACCTGAGCAGAGGCTGGGGTTGAA...CAAATAGACACTGAGCACTTGTTTTGTGCCAGGTATTCTGATAGGCACTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355809.4
CDS-3UTR GCA 90 bp GGTCAAAGCCTTCAATCCAACTTCCAAGTAAGCAAGGAAGAAGAGGGGGTTTTCTTCAACCCCAGCCTCTaGTCAGGTGTCAATGCAGAT +
Preference number: 4 (lower is better)
Translates to: GQSLQSNFQVSKEEEGVFFNPSL*SGVNAD
Trigger: ATCTGCATTGACACCTGAGCAGAGGCTGGGGTTGAA...GAAAACCCCCTCTTCTTCCTTGCTTACTTGGAAGTTGGATTGAAGGCTTTGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGATGCTAAAGGAGATTTaGCATGTTTTTCCTTCATGG +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQMLKEI*HVFPSW
Trigger: CCATGAAGGAAAAACATGGCAAATCTCCTTTAGCAT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGAATACAACCATTGGTTaGCATATTGTTCGACTTGAC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQNTTIG*HIVRLD
Trigger: GTCAAGTCGAACAATATGGCAACCAATGGTTGTATT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGTATATCCCAAATACTaGACTCTAGGATCAATAGCT +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQVYPKY*TLGSIA
Trigger: AGCTATTGATCCTAGAGTGCAGTATTTGGGATATAC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGTATCATCTTTTGGTTaGTCTGCCTTAGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQVSSFG*SALALF
Trigger: AAACAAAGCTAAGGCAGACCAACCAAAAGATGATAC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCATGTTTTTCCTTCATaGCATTACTTTGGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQHVFPS*HYFGCL
Trigger: CAGACAACCAAAGTAATGCCATGAAGGAAAAACATG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGAATATAATTCCTGGGTaGGGAGGTTATCATCATCAT +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQNIIPG*GGYHHH
Trigger: ATGATGATGATAACCTCCCCACCCAGGAATTATATT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp TCAGGTCTCCATATTTTAGCTGTCTTTCTTCTGCTGCATTCTACCTCCACAATTCGACACGTTTCCTCTTaGTGGGTGGGGACAACGCTC +
Preference number: 4 (lower is better)
Translates to: SGLHILAVFLLLHSTSTIRHVSS*WVGTTL
Trigger: GAGCGTTGTCCCCACCCACCAAGAGGAAACGTGTCG...AATTGTGGAGGTAGAATGCAGCAGAAGAAAGACAGCTAAAATATGGAGACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527941.5
CDS-3UTR TCA 90 bp GAGCCACTGGGCCTGGCCGTGATTTGTGATTCTTTCCTTCAAAACCTAGCAGTGTCAAGTCGAAAGATGTaGTCTCTTTCTAAGCGTTCT +
Preference number: 4 (lower is better)
Translates to: EPLGLAVICDSFLQNLAVSSRKM*SLSKRS
Trigger: AGAACGCTTAGAAAGAGATCACATCTTTCGACTTGA...CACTGCTAGGTTTTGAAGGAAAGAATCACAAATCACGGCCAGGCCCAGTGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355809.4
CDS-3UTR TCA 90 bp GAGCCACTGGGCCTGGCCGTGATTTGTGATTCTTTCCTTCAAAACCTAGCAGTGGGAAGTAAGGAAAGATaGATGCAACCTCTGTCTTAT +
Preference number: 4 (lower is better)
Translates to: EPLGLAVICDSFLQNLAVGSKER*MQPLSY
Trigger: ATAAGACAGAGGTTGCATTCATCTTTCCTTACTTCC...CACTGCTAGGTTTTGAAGGAAAGAATCACAAATCACGGCCAGGCCCAGTGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355809.4
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGAATTAAGCAAAGTTTaGATAGATACCGACAATTGG +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQELSKV*IDTDNW
Trigger: CCAATTGTCGGTATCTATGCAAACTTTGCTTAATTC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGAAGCCAATTAAAATTTaGTCCCTGTTGTGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQKPIKI*SLLCCS
Trigger: TGAACAACACAACAGGGAGCAAATTTTAATTGGCTT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR GCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGTCAACAGCTTTTTCTaGCGAATGCTAATTACATAT +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQVNSFF*RMLITY
Trigger: ATATGTAATTAGCATTCGGCAGAAAAAGCTGTTGAC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR GCA 90 bp CAAAAACAAAAGCAAGGGATAGACCATAGTTTGCCAACTCTTGGGATGAATGAAGCTCACCGCAACCTCTaGCCCCTGGGTTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: QKQKQGIDHSLPTLGMNEAHRNL*PLGSSN
Trigger: ATTGCTTGAACCCAGGGGGCAGAGGTTGCGGTGAGC...TTCATTCATCCCAAGAGTTGGCAAACTATGGTCTATCCCTTGCTTTTGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355809.4
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGACTACTATTCCTATTTaGAGAGCTGTTCTCAATTTC +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQTTIPI*RAVLNF
Trigger: GAAATTGAGAACAGCTCTCCAAATAGGAATAGTAGT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGATTCATCTATCACAGTaGCATTTTCTAAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQIHLSQ*HFLSSP
Trigger: TGGACTACTTAGAAAATGCCACTGTGATAGATGAAT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGATAGATACCGACAATTaGTATATTCTGGTGATCGTT +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQIDTDN*YILVIV
Trigger: AACGATCACCAGAATATACCAATTGTCGGTATCTAT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCATCTGTTAATACTCTaGAATCAAAGAAGTACTCAG +
Preference number: 4 (lower is better)
Translates to: TDTLETAGLAGCCASVDQHLLIL*NQRSTQ
Trigger: CTGAGTACTTCTTTGATTCCAGAGTATTAACAGATG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CCA 90 bp TCAGGTCTCCATATTTTAGCTGTCTTTCTTCTGCTGCATTCTACCTCCACAATTCACGTTTCCTCTTGGTaGGTGGGGACAACGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SGLHILAVFLLLHSTSTIHVSSW*VGTTLS
Trigger: AGAGAGCGTTGTCCCCACCCACCAAGAGGAAACGTG...AATTGTGGAGGTAGAATGCAGCAGAAGAAAGACAGCTAAAATATGGAGACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527941.5
CDS-3UTR TCA 90 bp GAGCCACTGGGCCTGGCCGTGATTTGTGATTCTTTCCTTCAAAACCTAGCAGTGACTTGGTACTTTTTCTaGCTTCATCTGATAACTGGA +
Preference number: 4 (lower is better)
Translates to: EPLGLAVICDSFLQNLAVTWYFF*LHLITG
Trigger: TCCAGTTATCAGATGAAGTCAGAAAAAGTACCAAGT...CACTGCTAGGTTTTGAAGGAAAGAATCACAAATCACGGCCAGGCCCAGTGGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355809.4
CDS-3UTR GCA 90 bp GAGCCACTGGGCCTGGCCGTGATTTGTGATTCTTTCCTTCAAAACCTAGCAGTGCTAATGGGAAGAAACTaGCATTTTCACCAATACATC +
Preference number: 4 (lower is better)
Translates to: EPLGLAVICDSFLQNLAVLMGRN*HFHQYI
Trigger: GATGTATTGGTGAAAATGGCAGTTTCTTCCCATTAG...CACTGCTAGGTTTTGAAGGAAAGAATCACAAATCACGGCCAGGCCCAGTGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355809.4
CDS-3UTR CCA 90 bp TTGAACTCAGGTCTCCATATTTTAGCTGTCTTTCTTCTGCTGCATTCTACCTCCCTCTACACCGACGGGTaGCACATCTGTCTTGAGTAT +
Preference number: 4 (lower is better)
Translates to: LNSGLHILAVFLLLHSTSLYTDG*HICLEY
Trigger: ATACTCAAGACAGATGTGCCACCCGTCGGTGTAGAG...GGAGGTAGAATGCAGCAGAAGAAAGACAGCTAAAATATGGAGACCTGAGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527941.5
CDS-3UTR TCA 90 bp AAGACAGGTTCTATTTTGCCAAGGGCAGTAAGTAAATCAGTAGTGAGACATGCCCATGTCTGTTGCTTCTaGGATCGTGGTGAGTTTTGC +
Preference number: 4 (lower is better)
Translates to: KTGSILPRAVSKSVVRHAHVCCF*DRGEFC
Trigger: GCAAAACTCACCACGATCTCAGAAGCAACAGACATG...GGCATGTCTCACTACTGATTTACTTACTGCCCTTGGCAAAATAGAACCTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR CCA 90 bp GAGCCACTGGGCCTGGCCGTGATTTGTGATTCTTTCCTTCAAAACCTAGCAGTGATTCATCTATCACAGTaGCATTTTCTAAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: EPLGLAVICDSFLQNLAVIHLSQ*HFLSSP
Trigger: TGGACTACTTAGAAAATGCCACTGTGATAGATGAAT...CACTGCTAGGTTTTGAAGGAAAGAATCACAAATCACGGCCAGGCCCAGTGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355809.4
CDS-3UTR CCA 90 bp GCATGGGAACTTGAACTCAGGTCTCCATATTTTAGCTGTCTTTCTTCTGCTGCAATGTTCCCAAGGAATTaGAGGAGTCAGTCCTCGAAA +
Preference number: 4 (lower is better)
Translates to: AWELELRSPYFSCLSSAAMFPRN*RSQSSK
Trigger: TTTCGAGGACTGACTCCTCCAATTCCTTGGGAACAT...TGCAGCAGAAGAAAGACAGCTAAAATATGGAGACCTGAGTTCAAGTTCCCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527941.5
CDS-3UTR CCA 90 bp TATTTTAGCTGTCTTTCTTCTGCTGCATTCTACCTCCACAATTGCAGCTTTCTTTTGAGACAGCAGGATTaGCTGGTTGCTGTGCATCGG +
Preference number: 4 (lower is better)
Translates to: YFSCLSSAAFYLHNCSFLLRQQD*LVAVHR
Trigger: CCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAA...AAGAAAGCTGCAATTGTGGAGGTAGAATGCAGCAGAAGAAAGACAGCTAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527941.5
3UTR CAA 72 bp GCAGCTCTAACCATAACTGTCCCAAGGATACCCGATTaGGTGTTTCCAATGCTAAAGGAGATTTGCCATGTT +
Preference number: 4 (lower is better)
Translates to: AALTITVPRIPD*VFPMLKEICHV
Trigger: AACATGGCAAATCTCCTTTAGCATTGGAAACACCAAATCGGGTATCCTTGGGACAGTTATGGTTAGAGCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR GCA 90 bp GCCTATCAGAATACCTGGCACAAAACAAGTGCTCAGTGTCTATTTGATGAGTGCCTGCTCAGGTGTCAATaGAGATTCATCTATCACAGT +
Preference number: 4 (lower is better)
Translates to: AYQNTWHKTSAQCLFDECLLRCQ*RFIYHS
Trigger: ACTGTGATAGATGAATCTGCATTGACACCTGAGCAG...GCACTCATCAAATAGACACTGAGCACTTGTTTTGTGCCAGGTATTCTGATAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355809.4
CDS-3UTR GCA 90 bp AGCAGCTCTAACCATAACTGTCCCAAGGATACCCGATTTGGTGTTTCCAATGCTACTTCTCTTCTACTATaGCCTTCAGCTGAAAGTCAT +
Preference number: 4 (lower is better)
Translates to: SSSNHNCPKDTRFGVSNATSLLL*PSAESH
Trigger: ATGACTTTCAGCTGAAGGGCATAGTAGAAGAGAAGT...AGCATTGGAAACACCAAATCGGGTATCCTTGGGACAGTTATGGTTAGAGCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR GCA 90 bp ATTTTAGCTGTCTTTCTTCTGCTGCATTCTACCTCCACAATTGCAGCTTTCTTAATTGGCTGGTTGCTGTaGATCGGTAGACCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: ILAVFLLLHSTSTIAAFLIGWLL*IGRPAE
Trigger: TTCAGCTGGTCTACCGATGCACAGCAACCAGCCAAT...TAAGAAAGCTGCAATTGTGGAGGTAGAATGCAGCAGAAGAAAGACAGCTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527941.5
CDS-3UTR CCA 90 bp GCCTATCAGAATACCTGGCACAAAACAAGTGCTCAGTGTCTATTTGATGAGTGCCAAATCTTTAGGACCTaGAAGGTTGGCAGCATTTAC +
Preference number: 4 (lower is better)
Translates to: AYQNTWHKTSAQCLFDECQIFRT*KVGSIY
Trigger: GTAAATGCTGCCAACCTTCCAGGTCCTAAAGATTTG...GCACTCATCAAATAGACACTGAGCACTTGTTTTGTGCCAGGTATTCTGATAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355809.4
CDS-3UTR CCA 90 bp GCCTATCAGAATACCTGGCACAAAACAAGTGCTCAGTGTCTATTTGATGAGTGCCTTTCAACAGTAAACTaGGTCCCTTTTCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: AYQNTWHKTSAQCLFDECLSTVN*VPFLLL
Trigger: CAGAAGCAGAAAAGGGACCCAGTTTACTGTTGAAAG...GCACTCATCAAATAGACACTGAGCACTTGTTTTGTGCCAGGTATTCTGATAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355809.4
CDS-3UTR CCA 90 bp AGCAGCTCTAACCATAACTGTCCCAAGGATACCCGATTTGGTGTTTCCAATGCTGTCATCCATTCTTTTTaGGTCAAAGCCTTCAATCCA +
Preference number: 4 (lower is better)
Translates to: SSSNHNCPKDTRFGVSNAVIHSF*VKAFNP
Trigger: TGGATTGAAGGCTTTGACCCAAAAAGAATGGATGAC...AGCATTGGAAACACCAAATCGGGTATCCTTGGGACAGTTATGGTTAGAGCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR CCA 90 bp AGCAGCTCTAACCATAACTGTCCCAAGGATACCCGATTTGGTGTTTCCAATGCTCTTGGTATCATCTTTTaGTTGGTCTGCCTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: SSSNHNCPKDTRFGVSNALGIIF*LVCLSF
Trigger: AAAGCTAAGGCAGACCAACCAAAAGATGATACCAAG...AGCATTGGAAACACCAAATCGGGTATCCTTGGGACAGTTATGGTTAGAGCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR TCA 90 bp GGTCAAAGCCTTCAATCCAACTTCCAAGTAAGCAAGGAAGAAGAGGGGGTTTTCACTTGGTACTTTTTCTaGCTTCATCTGATAACTGGA +
Preference number: 4 (lower is better)
Translates to: GQSLQSNFQVSKEEEGVFTWYFF*LHLITG
Trigger: TCCAGTTATCAGATGAAGTCAGAAAAAGTACCAAGT...GAAAACCCCCTCTTCTTCCTTGCTTACTTGGAAGTTGGATTGAAGGCTTTGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR GCA 90 bp TCCCCAGTGCCTATCAGAATACCTGGCACAAAACAAGTGCTCAGTGTCTATTTGTCCAGTAGTTTAAATTaGTTCAAGTCCAGTTTAGGC +
Preference number: 4 (lower is better)
Translates to: SPVPIRIPGTKQVLSVYLSSSLN*FKSSLG
Trigger: GCCTAAACTGGACTTGAAGCAATTTAAACTACTGGA...CAAATAGACACTGAGCACTTGTTTTGTGCCAGGTATTCTGATAGGCACTGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355809.4
CDS-3UTR GCA 90 bp GGTCAAAGCCTTCAATCCAACTTCCAAGTAAGCAAGGAAGAAGAGGGGGTTTTCTCCAGTAGTTTAAATTaGTTCAAGTCCAGTTTAGGC +
Preference number: 4 (lower is better)
Translates to: GQSLQSNFQVSKEEEGVFSSSLN*FKSSLG
Trigger: GCCTAAACTGGACTTGAAGCAATTTAAACTACTGGA...GAAAACCCCCTCTTCTTCCTTGCTTACTTGGAAGTTGGATTGAAGGCTTTGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR GCA 90 bp AAGACAGGTTCTATTTTGCCAAGGGCAGTAAGTAAATCAGTAGTGAGACATGCCCACTTTTTCGATCTCTaGACACCACAACAGGAACTT +
Preference number: 4 (lower is better)
Translates to: KTGSILPRAVSKSVVRHAHFFDL*TPQQEL
Trigger: AAGTTCCTGTTGTGGTGTGCAGAGATCGAAAAAGTG...GGCATGTCTCACTACTGATTTACTTACTGCCCTTGGCAAAATAGAACCTGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR GCA 90 bp GGTCAAAGCCTTCAATCCAACTTCCAAGTAAGCAAGGAAGAAGAGGGGGTTTTCATGCTAAAGGAGATTTaGCATGTTTTTCCTTCATGG +
Preference number: 4 (lower is better)
Translates to: GQSLQSNFQVSKEEEGVFMLKEI*HVFPSW
Trigger: CCATGAAGGAAAAACATGGCAAATCTCCTTTAGCAT...GAAAACCCCCTCTTCTTCCTTGCTTACTTGGAAGTTGGATTGAAGGCTTTGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR GCA 90 bp TGGGAACTTGAACTCAGGTCTCCATATTTTAGCTGTCTTTCTTCTGCTGCATTCCTGTCTTTCTTCTGCTaGATTCTACCTCCACAATTG +
Preference number: 4 (lower is better)
Translates to: WELELRSPYFSCLSSAAFLSFFC*ILPPQL
Trigger: CAATTGTGGAGGTAGAATGCAGCAGAAGAAAGACAG...GAATGCAGCAGAAGAAAGACAGCTAAAATATGGAGACCTGAGTTCAAGTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527941.5
CDS-3UTR CCA 90 bp AGCAGCTCTAACCATAACTGTCCCAAGGATACCCGATTTGGTGTTTCCAATGCTCATGTTTTTCCTTCATaGCATTACTTTGGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: SSSNHNCPKDTRFGVSNAHVFPS*HYFGCL
Trigger: CAGACAACCAAAGTAATGCCATGAAGGAAAAACATG...AGCATTGGAAACACCAAATCGGGTATCCTTGGGACAGTTATGGTTAGAGCTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR CCA 90 bp TTGAACTCAGGTCTCCATATTTTAGCTGTCTTTCTTCTGCTGCATTCTACCTCCTATAGAAAGGTTTGTTaGGCTGGAATCGGGCATTTC +
Preference number: 4 (lower is better)
Translates to: LNSGLHILAVFLLLHSTSYRKVC*AGIGHF
Trigger: GAAATGCCCGATTCCAGCCCAACAAACCTTTCTATA...GGAGGTAGAATGCAGCAGAAGAAAGACAGCTAAAATATGGAGACCTGAGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527941.5
3UTR CAA 72 bp CCCATTCAAAAACAAAAGCAAGGGATAGACCATAGTTaGCCAACTCTTGGGATGAATGAAGTCAGACTCACA +
Preference number: 4 (lower is better)
Translates to: PIQKQKQGIDHS*PTLGMNEVRLT
Trigger: TGTGAGTCTGACTTCATTCATCCCAAGAGTTGGCAAACTATGGTCTATCCCTTGCTTTTGTTTTTGAATGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355809.4
CDS-3UTR GCA 90 bp TCTATTTTGCCAAGGGCAGTAAGTAAATCAGTAGTGAGACATGCCATATCGTTTGATCGTGGTGAGTTTTaGAGAGCACATTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SILPRAVSKSVVRHAISFDRGEF*RAHFSP
Trigger: GGGAGAAAAATGTGCTCTGCAAAACTCACCACGATC...AAACGATATGGCATGTCTCACTACTGATTTACTTACTGCCCTTGGCAAAATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR GCA 90 bp CATGCCATATCGTTTCCTGCACTCACTCTACAAAGTAAACCACTTTTTCGATCTCTGCTCAGGTGTCAATaGAGATTCATCTATCACAGT +
Preference number: 4 (lower is better)
Translates to: HAISFPALTLQSKPLFRSLLRCQ*RFIYHS
Trigger: ACTGTGATAGATGAATCTGCATTGACACCTGAGCAG...AGATCGAAAAAGTGGTTTACTTTGTAGAGTGAGTGCAGGAAACGATATGGCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR GCA 90 bp TCACCATTAAAGCAAAACAGTAAGAAGGGATTCCACCATCAGTTTGGGAGTCAAATCAGTAGTGAGACATaGCATATCGTTTCCTGCACT +
Preference number: 4 (lower is better)
Translates to: SPLKQNSKKGFHHQFGSQISSET*HIVSCT
Trigger: AGTGCAGGAAACGATATGGCATGTCTCACTACTGAT...TTGACTCCCAAACTGATGGTGGAATCCCTTCTTACTGTTTTGCTTTAATGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR GCA 90 bp TCCCCAGTGCCTATCAGAATACCTGGCACAAAACAAGTGCTCAGTGTCTATTTGGTAAGGAAAGATGAATaGAACCTCTGTCTTATGAAT +
Preference number: 4 (lower is better)
Translates to: SPVPIRIPGTKQVLSVYLVRKDE*NLCLMN
Trigger: ATTCATAAGACAGAGGTTGCATTCATCTTTCCTTAC...CAAATAGACACTGAGCACTTGTTTTGTGCCAGGTATTCTGATAGGCACTGGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355809.4
CDS-3UTR CCA 90 bp ATATCGTTTCCTGCACTCACTCTACAAAGTAAACCACTTTTTCGATCTCTGCACCTTTCAACAGTAAACTaGGTCCCTTTTCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: ISFPALTLQSKPLFRSLHLSTVN*VPFLLL
Trigger: CAGAAGCAGAAAAGGGACCCAGTTTACTGTTGAAAG...GTGCAGAGATCGAAAAAGTGGTTTACTTTGTAGAGTGAGTGCAGGAAACGATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR CCA 90 bp AGCAGCTCTAACCATAACTGTCCCAAGGATACCCGATTTGGTGTTTCCAATGCTATTCATCTATCACAGTaGCATTTTCTAAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: SSSNHNCPKDTRFGVSNAIHLSQ*HFLSSP
Trigger: TGGACTACTTAGAAAATGCCACTGTGATAGATGAAT...AGCATTGGAAACACCAAATCGGGTATCCTTGGGACAGTTATGGTTAGAGCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR TCA 90 bp CATGCCATATCGTTTCCTGCACTCACTCTACAAAGTAAACCACTTTTTCGATCTTCAAGTCGAAAGATGTaGTCTCTTTCTAAGCGTTCT +
Preference number: 4 (lower is better)
Translates to: HAISFPALTLQSKPLFRSSSRKM*SLSKRS
Trigger: AGAACGCTTAGAAAGAGATCACATCTTTCGACTTGA...AGATCGAAAAAGTGGTTTACTTTGTAGAGTGAGTGCAGGAAACGATATGGCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR TCA 90 bp CATGCCATATCGTTTCCTGCACTCACTCTACAAAGTAAACCACTTTTTCGATCTATCAGAAGATCTGGATaGTTCATCTTGGGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: HAISFPALTLQSKPLFRSIRRSG*FILGGN
Trigger: ATTTCCTCCCAAGATGAATCATCCAGATCTTCTGAT...AGATCGAAAAAGTGGTTTACTTTGTAGAGTGAGTGCAGGAAACGATATGGCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR TCA 90 bp TCTATTTTGCCAAGGGCAGTAAGTAAATCAGTAGTGAGACATGCCATATCGTTTCTCAGTTGCACTACTTaGATTACATTCCCACTTCAC +
Preference number: 4 (lower is better)
Translates to: SILPRAVSKSVVRHAISFLSCTT*ITFPLH
Trigger: GTGAAGTGGGAATGTAATTCAAGTAGTGCAACTGAG...AAACGATATGGCATGTCTCACTACTGATTTACTTACTGCCCTTGGCAAAATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR TCA 90 bp TCACCATTAAAGCAAAACAGTAAGAAGGGATTCCACCATCAGTTTGGGAGTCAAGTTTTCCTCAGCAATTaGGTTTTTCTCAGTTGCACT +
Preference number: 4 (lower is better)
Translates to: SPLKQNSKKGFHHQFGSQVFLSN*VFLSCT
Trigger: AGTGCAACTGAGAAAAACTCAATTGCTGAGGAAAAC...TTGACTCCCAAACTGATGGTGGAATCCCTTCTTACTGTTTTGCTTTAATGGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000473856.5
3UTR CAA 72 bp AAGGCTAACACCAAGGGAATAAAGACAGGTTCTATTTaGCCAAGGGCAGTAAGTAAATCAGTAGTGAGACAT +
Preference number: 4 (lower is better)
Translates to: KANTKGIKTGSI*PRAVSKSVVRH
Trigger: ATGTCTCACTACTGATTTACTTACTGCCCTTGGCAAAATAGAACCTGTCTTTATTCCCTTGGTGTTAGCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR GCA 90 bp AAGACAGGTTCTATTTTGCCAAGGGCAGTAAGTAAATCAGTAGTGAGACATGCCGAATTAAGCAAAGTTTaGATAGATACCGACAATTGG +
Preference number: 4 (lower is better)
Translates to: KTGSILPRAVSKSVVRHAELSKV*IDTDNW
Trigger: CCAATTGTCGGTATCTATGCAAACTTTGCTTAATTC...GGCATGTCTCACTACTGATTTACTTACTGCCCTTGGCAAAATAGAACCTGTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR CCA 90 bp ATATCGTTTCCTGCACTCACTCTACAAAGTAAACCACTTTTTCGATCTCTGCACGTATCATCTTTTGGTTaGTCTGCCTTAGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: ISFPALTLQSKPLFRSLHVSSFG*SALALF
Trigger: AAACAAAGCTAAGGCAGACCAACCAAAAGATGATAC...GTGCAGAGATCGAAAAAGTGGTTTACTTTGTAGAGTGAGTGCAGGAAACGATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR CCA 90 bp TCACCATTAAAGCAAAACAGTAAGAAGGGATTCCACCATCAGTTTGGGAGTCAAACTACTATTCCTATTTaGAGAGCTGTTCTCAATTTC +
Preference number: 4 (lower is better)
Translates to: SPLKQNSKKGFHHQFGSQTTIPI*RAVLNF
Trigger: GAAATTGAGAACAGCTCTCCAAATAGGAATAGTAGT...TTGACTCCCAAACTGATGGTGGAATCCCTTCTTACTGTTTTGCTTTAATGGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR CCA 90 bp ATATCGTTTCCTGCACTCACTCTACAAAGTAAACCACTTTTTCGATCTCTGCACATAGATACCGACAATTaGTATATTCTGGTGATCGTT +
Preference number: 4 (lower is better)
Translates to: ISFPALTLQSKPLFRSLHIDTDN*YILVIV
Trigger: AACGATCACCAGAATATACCAATTGTCGGTATCTAT...GTGCAGAGATCGAAAAAGTGGTTTACTTTGTAGAGTGAGTGCAGGAAACGATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR GCA 90 bp TATCCGTACACATATGACATATTCCTCCAAAGCAAAATCCAGTGTGTAGAATTTATCTTTTGGTTGGTCTaGCTTAGCTTTGTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: YPYTYDIFLQSKIQCVEFIFWLV*LSFVFL
Trigger: GAGGAAAACAAAGCTAAGGCAGACCAACCAAAAGAT...AAATTCTACACACTGGATTTTGCTTTGGAGGAATATGTCATATGTGTACGGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGACCTGATGGGGAGGTaGGGCTCCCTGCTGAGGTGG +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQDLMGR*GSLLRW
Trigger: CCACCTCAGCAGGGAGCCCAACCTCCCCATCAGGTC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGAGGCTGATGGGGAGGTaGGGCTCCCTGCTGAGGTGG +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQRLMGR*GSLLRW
Trigger: CCACCTCAGCAGGGAGCCCAACCTCCCCATCAGCCT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494469.5
CDS TCA 90 bp CCAGCTGGGCTGCTGCCACACTGCTATTCCTCTGACGGGCCAGCTTaGCCTCTGGGCACTCCCTTCGTACATGTCCAGCATCTCCACATA +
Preference number: 5 (lower is better)
Translates to: PAGLLPHCYSSDGPA*PLGTPFVHVQHLHI
Trigger: TATGTGGAGATGCTGGACATGTACGAAGGGAGTGCCCAGAGGTCAAGCTGGCCCGTCAGAGGAATAGCAGTGTGGCAGCAGCCCAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000469810.1
ENST00000470212.1
ENST00000474453.6
ENST00000531722.5
CDS GCA 90 bp AGCCACAGTACGGGGCCAGTGTCCATCGTGAGACGTGTTAGGGATTaGCACAGGTCTGGCAGCAGGCTGTGCAAAGATGATGCTGGGATC +
Preference number: 5 (lower is better)
Translates to: SHSTGPVSIVRRVRD*HRSGSRLCKDDAGI
Trigger: GATCCCAGCATCATCTTTGCACAGCCTGCTGCCAGACCTGTGGCAATCCCTAACACGTCTCACGATGGACACTGGCCCCGTACTGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000466440.1
ENST00000528457.5
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCCGACACGTTTCCTCTaGGTGGGTGGGGACAACGCT +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQPTRFL*VGGDNA
Trigger: AGCGTTGTCCCCACCCACCAAGAGGAAACGTGTCGG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS TCA 90 bp TTTACCAGGGAATTTGGAGCCACAGTACGGGGCCAGTGTCCATCGTaGGACGTGTTAGGGATTGCCACAGGTCTGGCAGCAGGCTGTGCA +
Preference number: 5 (lower is better)
Translates to: FTREFGATVRGQCPS*DVLGIATGLAAGCA
Trigger: TGCACAGCCTGCTGCCAGACCTGTGGCAATCCCTAACACGTCTCACGATGGACACTGGCCCCGTACTGTGGCTCCAAATTCCCTGGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000466440.1
ENST00000528457.5
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTGTTTACCAGGGAATTaGGAGCCACAGTACGGGGCC +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQCLPGN*EPQYGA
Trigger: GGCCCCGTACTGTGGCTCCAAATTCCCTGGTAAACA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGAGCAGGATTGGCTGGTaGCTGTGCATCGGTAGACCA +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQSRIGW*LCIGRP
Trigger: TGGTCTACCGATGCACAGCAACCAGCCAATCCTGCT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCTTGAGACAGCAGGATaGGCTGGTTGCTGTGCATCG +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQLETAG*AGCCAS
Trigger: CGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGAGGTACGGATACCCTaGAGACAGCAGGATTGGCTG +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQEVRIP*RQQDWL
Trigger: CAGCCAATCCTGCTGTCTCAAGGGTATCCGTACCTC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS CCA 90 bp GGCTGCTGCCACACTGCTATTCCTCTGACGGGCCAGCTTGACCTCTaGGCACTCCCTTCGTACATGTCCAGCATCTCCACATATAAAACA +
Preference number: 5 (lower is better)
Translates to: GCCHTAIPLTGQLDL*ALPSYMSSISTYKT
Trigger: TGTTTTATATGTGGAGATGCTGGACATGTACGAAGGGAGTGCCCAGAGGTCAAGCTGGCCCGTCAGAGGAATAGCAGTGTGGCAGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000469810.1
ENST00000470212.1
ENST00000474453.6
ENST00000531722.5
CDS CCA 90 bp CTGAAAGAAAATGGACTCGCATTACTCCGACACGTTTCCTCTTGGTaGGTGGGGACAACGCTCTCTACACCGACGGGTGGCACATCTGTC +
Preference number: 5 (lower is better)
Translates to: LKENGLALLRHVSSW*VGTTLSTPTGGTSV
Trigger: GACAGATGTGCCACCCGTCGGTGTAGAGAGCGTTGTCCCCACCCACCAAGAGGAAACGTGTCGGAGTAATGCGAGTCCATTTTCTTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000466440.1
ENST00000494469.5
ENST00000527941.5
CDS CCA 90 bp CAGCTGAAAGAAAATGGACTCGCATTACTCCGACACGTTTCCTCTTaGTGGGTGGGGACAACGCTCTCTACACCGACGGGTGGCACATCT +
Preference number: 5 (lower is better)
Translates to: QLKENGLALLRHVSS*WVGTTLSTPTGGTS
Trigger: AGATGTGCCACCCGTCGGTGTAGAGAGCGTTGTCCCCACCCACCAAGAGGAAACGTGTCGGAGTAATGCGAGTCCATTTTCTTTCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000466440.1
ENST00000494469.5
ENST00000527941.5
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTCATTTAGGCCAATATaGCTGGGGGCACTGCCTGGT +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQSFRPI*LGALPG
Trigger: ACCAGGCAGTGCCCCCAGCAATATTGGCCTAAATGA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS CCA 90 bp AGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCTGAAAGAAAATaGACTCGCATTACTCCGACACGTTTCCTCTTGGTGGGTGGGGAC +
Preference number: 5 (lower is better)
Translates to: RIGWLLCIGRPAERK*TRITPTRFLLVGGD
Trigger: GTCCCCACCCACCAAGAGGAAACGTGTCGGAGTAATGCGAGTCCATTTTCTTTCAGCTGGTCTACCGATGCACAGCAACCAGCCAATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000466440.1
ENST00000494469.5
ENST00000527941.5
CDS CCA 90 bp AAGAAAATGGACTCGCATTACTCCGACACGTTTCCTCTTGGTGGGTaGGGACAACGCTCTCTACACCGACGGGTGGCACATCTGTCTGTT +
Preference number: 5 (lower is better)
Translates to: KKMDSHYSDTFPLGG*GQRSLHRRVAHLSV
Trigger: AACAGACAGATGTGCCACCCGTCGGTGTAGAGAGCGTTGTCCCCACCCACCAAGAGGAAACGTGTCGGAGTAATGCGAGTCCATTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466440.1
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTTGCCTGTGAAATGGTaGCCTTTTCGGCTTTCACCG +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQLPVKW*PFRLSP
Trigger: CGGTGAAAGCCGAAAAGGCAACCATTTCACAGGCAA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTGCTGCATACTATCGTaGGTGGCTTGCCAGAGGTTA +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQCCILS*VACQRL
Trigger: TAACCTCTGGCAAGCCACCAACGATAGTATGCAGCA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCATGTTCCCAAGGAATaGGAGGAGTCAGTCCTCGAA +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQHVPKE*EESVLE
Trigger: TTCGAGGACTGACTCCTCCAATTCCTTGGGAACATG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS-3UTR CAA 90 bp TCAGGCTGGTCTCGAATTCCTGACCTCAAGCAACCTGCCCACCTCGGCTTCCCATTGCCTTTTCTGATTTaGCCTGTGAAATGGTTGCCT +
Preference number: 5 (lower is better)
Translates to: SGWSRIPDLKQPAHLGFPLPFLI*PVKWLP
Trigger: AGGCAACCATTTCACAGGCAAAATCAGAAAAGGCAA...TGGGAAGCCGAGGTGGGCAGGTTGCTTGAGGTCAGGAATTCGAGACCAGCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355809.4
CDS-3UTR CAA 90 bp TCAGGCTGGTCTCGAATTCCTGACCTCAAGCAACCTGCCCACCTCGGCTTCCCACTTCTGCTGGTGAACTaGGTACTTTTTCTGACTTCA +
Preference number: 5 (lower is better)
Translates to: SGWSRIPDLKQPAHLGFPLLLVN*VLFLTS
Trigger: TGAAGTCAGAAAAAGTACCAAGTTCACCAGCAGAAG...TGGGAAGCCGAGGTGGGCAGGTTGCTTGAGGTCAGGAATTCGAGACCAGCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355809.4
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTCTGTAGCTTTGCAGTaGCAAGAGGTAGCAGATGTG +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQSVALQ*QEVADV
Trigger: CACATCTGCTACCTCTTGCAACTGCAAAGCTACAGA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGCATCTTCTGTAGCTTaGCAGTTGCAAGAGGTAGCA +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQASSVA*QLQEVA
Trigger: TGCTACCTCTTGCAACTGCAAAGCTACAGAAGATGC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTCTGGAGAGGGTGCATaGGCAACAATCCCATATTGT +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQSGEGA*ATIPYC
Trigger: ACAATATGGGATTGTTGCCAATGCACCCTCTCCAGA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp GCATTCTACCTCCACAATTGCAGCTTTCTTACCTGTAATCCCAGCTACTCAGGACCGACACGTTTCCTCTaGGTGGGTGGGGACAACGCT +
Preference number: 5 (lower is better)
Translates to: AFYLHNCSFLTCNPSYSGPTRFL*VGGDNA
Trigger: AGCGTTGTCCCCACCCACCAAGAGGAAACGTGTCGG...TCCTGAGTAGCTGGGATTACAGGTAAGAAAGCTGCAATTGTGGAGGTAGAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527941.5
CDS TCA 90 bp TGGCAACAATCCCATATTGTGCATGGGAGAATACTGAGCTGGTGGTaGCTGGGGAAAGTTATACAGTGGCATCTGGACCTGATGGGGAGG +
Preference number: 5 (lower is better)
Translates to: WQQSHIVHGRILSWW*LGKVIQWHLDLMGR
Trigger: CCTCCCCATCAGGTCCAGATGCCACTGTATAACTTTCCCCAGTCACCACCAGCTCAGTATTCTCCCATGCACAATATGGGATTGTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000466440.1
CDS GCA 90 bp GCGACAGAGCAAGACTCCATCCTTGAGACAGCAGGATTGGCTGGTTaGTGTGCATCGGTAGACCAGCTGAAAGAAAATGGACTCGCATTA +
Preference number: 5 (lower is better)
Translates to: ATEQDSILETAGLAG*CASVDQLKENGLAL
Trigger: TAATGCGAGTCCATTTTCTTTCAGCTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGATGGAGTCTTGCTCTGTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527941.5
CDS CCA 90 bp GTGGGGACAACGCTCTCTACACCGACGGGTGGCACATCTGTCTGTTaGATACAACACAGACAGGAAACTGAAAGGCTTGTGCCTGTTTAT +
Preference number: 5 (lower is better)
Translates to: VGTTLSTPTGGTSVC*IQHRQETERLVPVY
Trigger: ATAAACAGGCACAAGCCTTTCAGTTTCCTGTCTGTGTTGTATCCAACAGACAGATGTGCCACCCGTCGGTGTAGAGAGCGTTGTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466440.1
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTGGTCTGCCTTAGCTTaGTTTTCCTCAGCAATTGAG +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQWSALA*FSSAIE
Trigger: CTCAATTGCTGAGGAAAACAAAGCTAAGGCAGACCA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCCAAGGATACCCGATTaGGTGTTTCCAATGCTAAAG +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQPRIPD*VFPMLK
Trigger: CTTTAGCATTGGAAACACCAAATCGGGTATCCTTGG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCCATTGGTTGCCATATaGTTCGACTTGACTGGTTTC +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQPLVAI*FDLTGF
Trigger: GAAACCAGTCAAGTCGAACAATATGGCAACCAATGG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGAATGGCCATCCTTTTaGCAGATGCTGCATACTATC +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQEWPSF*QMLHTI
Trigger: GATAGTATGCAGCATCTGCAAAAAGGATGGCCATTC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTTTCCCGAAATCGGTTaGTCATTGGTGGTAGAGGTT +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQFPEIG*SLVVEV
Trigger: AACCTCTACCACCAATGACAAACCGATTTCGGGAAA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTCAATTGCAATGCACTaGGAAGTCCACTGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQSIAMH*EVHCFS
Trigger: TGAGAAGCAGTGGACTTCCAAGTGCATTGCAATTGA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCAAAAGGGTCTTCAATaGCAATGCACTTGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQQKGLQ*QCTWKS
Trigger: GGACTTCCAAGTGCATTGCAATTGAAGACCCTTTTG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS TCA 90 bp AGAGGGTGCATTGGCAACAATCCCATATTGTGCATGGGAGAATACTaGGCTGGTGGTGACTGGGGAAAGTTATACAGTGGCATCTGGACC +
Preference number: 5 (lower is better)
Translates to: RGCIGNNPILCMGEY*AGGDWGKLYSGIWT
Trigger: GGTCCAGATGCCACTGTATAACTTTCCCCAGTCACCACCAGCTCAGTATTCTCCCATGCACAATATGGGATTGTTGCCAATGCACCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000466440.1
CDS GCA 90 bp CCCAGTTCTTTGCTCAAGAGAAGAGCTCAACCACAGTCAAGGCTCTaGCACTCTACAATACAGGGATGCCCCAGTAGTATATGGGTGGTT +
Preference number: 5 (lower is better)
Translates to: PSSLLKRRAQPQSRL*HSTIQGCPSSIWVV
Trigger: AACCACCCATATACTACTGGGGCATCCCTGTATTGTAGAGTGGCAGAGCCTTGACTGTGGTTGAGCTCTTCTCTTGAGCAAAGAACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466440.1
CDS CCA 90 bp CAGGGATCTGGAGAGGGTGCATTGGCAACAATCCCATATTGTGCATaGGAGAATACTGAGCTGGTGGTGACTGGGGAAAGTTATACAGTG +
Preference number: 5 (lower is better)
Translates to: QGSGEGALATIPYCA*ENTELVVTGESYTV
Trigger: CACTGTATAACTTTCCCCAGTCACCACCAGCTCAGTATTCTCCCATGCACAATATGGGATTGTTGCCAATGCACCCTCTCCAGATCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000466440.1
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTTGCCTTTTCTGATTTaGCCTGTGAAATGGTTGCCT +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQLPFLI*PVKWLP
Trigger: AGGCAACCATTTCACAGGCAAAATCAGAAAAGGCAA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTTGCCTGTAAACTGGTaGCCTTTTCTGATTTTGCCT +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQLPVNW*PFLILP
Trigger: AGGCAAAATCAGAAAAGGCAACCAGTTTACAGGCAA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCTTCTGCTGGTGAACTaGGTACTTTTTCTGACTTCA +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQLLLVN*VLFLTS
Trigger: TGAAGTCAGAAAAAGTACCAAGTTCACCAGCAGAAG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGATTCCACCATCAGTTaGGGAGTCAATATAGCACAA +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQDSTIS*GVNIAQ
Trigger: TTGTGCTATATTGACTCCCAAACTGATGGTGGAATC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGAGTCATCCATTCTTTTaGGGTCAAAGCCTTCAATCC +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQSHPFF*GQSLQS
Trigger: GGATTGAAGGCTTTGACCCAAAAAGAATGGATGACT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGGTATCATCTTTTGGTaGGTCTGCCTTAGCTTTGTT +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQGIIFW*VCLSFV
Trigger: AACAAAGCTAAGGCAGACCAACCAAAAGATGATACC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCGTGCAACATTCCTCTaGACTGAAAATGGATCTTCA +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQRATFL*TENGSS
Trigger: TGAAGATCCATTTTCAGTCAAGAGGAATGTTGCACG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGAGCAGAATACAACCATaGGTTGCCATATTGTTCGAC +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQSRIQP*VAILFD
Trigger: GTCGAACAATATGGCAACCAATGGTTGTATTCTGCT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGTCCATTTCATCACATaGAACAGGTTGCTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQVHFIT*NRLLSF
Trigger: GAAAGAGAGCAACCTGTTCAATGTGATGAAATGGAC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGACTATCGTTGGTGGCTaGCCAGAGGTTAAAATAAAC +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQTIVGG*PEVKIN
Trigger: GTTTATTTTAACCTCTGGCAAGCCACCAACGATAGT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGACTGCTTCTCAAAAGTaGTCAACAGCTTTTTCTGCC +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQTASQK*STAFSA
Trigger: GGCAGAAAAAGCTGTTGACAACTTTTGAGAAGCAGT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCTGATGCATGAAGTTTaGATGCAAACCATAAGGCCA +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQLMHEV*MQTIRP
Trigger: TGGCCTTATGGTTTGCATCAAAACTTCATGCATCAG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGGTGGCACATCTGTCTaGAGTATAGAAAGGTTTGTT +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQGGTSV*SIERFV
Trigger: AACAAACCTTTCTATACTCAAGACAGATGTGCCACC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000494469.5
CDS-3UTR CAA 90 bp CTTCTGCTGCATTCTACCTCCACAATTGCAGCTTTCTTACCTGTAATCCCAGCTAGCAGGATTGGCTGGTaGCTGTGCATCGGTAGACCA +
Preference number: 5 (lower is better)
Translates to: LLLHSTSTIAAFLPVIPASRIGW*LCIGRP
Trigger: TGGTCTACCGATGCACAGCAACCAGCCAATCCTGCT...AGCTGGGATTACAGGTAAGAAAGCTGCAATTGTGGAGGTAGAATGCAGCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527941.5
CDS-3UTR CAA 90 bp CTTCTGCTGCATTCTACCTCCACAATTGCAGCTTTCTTACCTGTAATCCCAGCTAGGCAGGAGAATCCCTaGAACCAGGAGGCGGAGATT +
Preference number: 5 (lower is better)
Translates to: LLLHSTSTIAAFLPVIPARQENP*NQEAEI
Trigger: AATCTCCGCCTCCTGGTTCAAGGGATTCTCCTGCCT...AGCTGGGATTACAGGTAAGAAAGCTGCAATTGTGGAGGTAGAATGCAGCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527941.5
CDS CCA 90 bp CATCTACAAGGATACCCTCCTTTGCTAGTTGCTGTTGAGAAGGCCTaGGACACTTCTTCCCTGTCCAATCAGTCTTTTTCTTCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: HLQGYPPLLVAVEKA*DTSSLSNQSFSSLE
Trigger: CTCCAGGGAAGAAAAAGACTGATTGGACAGGGAAGAAGTGTCCCAGGCCTTCTCAACAGCAACTAGCAAAGGAGGGTATCCTTGTAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371541.5
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGCTTCAATATTCACTTaGTCCACAGAAGTAAAGGAG +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQASIFT*STEVKE
Trigger: CTCCTTTACTTCTGTGGACAAAGTGAATATTGAAGC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCATAGATACCGACAATaGGTATATTCTGGTGATCGT +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQHRYRQ*VYSGDR
Trigger: ACGATCACCAGAATATACCAATTGTCGGTATCTATG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGAAGACAGGTTCTATTTaGCCAAGGGCAGTAAGTAAA +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQKTGSI*PRAVSK
Trigger: TTTACTTACTGCCCTTGGCAAAATAGAACCTGTCTT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTCTCAGTTGCACTACTaGAATTACATTCCCACTTCA +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQSQLHY*NYIPTS
Trigger: TGAAGTGGGAATGTAATTCAAGTAGTGCAACTGAGA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTGTTTTCCTCAGCAATaGAGTTTTTCTCAGTTGCAC +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQCFPQQ*SFSQLH
Trigger: GTGCAACTGAGAAAAACTCAATTGCTGAGGAAAACA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGCTTCATGGCATTACTTaGGTTGTCTGTTTCTGTCTT +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQLHGIT*VVCFCL
Trigger: AAGACAGAAACAGACAACCAAAGTAATGCCATGAAG...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGCCATATTGTTCGACTaGACTGGTTTCTTATTGCTT +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQAILFD*TGFLLL
Trigger: AAGCAATAAGAAACCAGTCAAGTCGAACAATATGGC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGAAAATTTGCTCCCTGTaGTGTTGTTCAGAACAAGGT +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQKICSL*CCSEQG
Trigger: ACCTTGTTCTGAACAACACAACAGGGAGCAAATTTT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp GAACTCAGGTCTCCATATTTTAGCTGTCTTTCTTCTGCTGCATTCTACCTCCACCTTGAGACAGCAGGATaGGCTGGTTGCTGTGCATCG +
Preference number: 5 (lower is better)
Translates to: ELRSPYFSCLSSAAFYLHLETAG*AGCCAS
Trigger: CGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAG...GTGGAGGTAGAATGCAGCAGAAGAAAGACAGCTAAAATATGGAGACCTGAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527941.5
CDS CCA 90 bp ATAAAACATCTGAGGTCTCTCGGGTCTCTAAAGTCTCGAGTATCGTaGAGGTCTCGGGGGTCAAGAACATCTCGGGAATCTTTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: IKHLRSLGSLKSRVS*RSRGSRTSRESFSS
Trigger: AGAAGAGAAAGATTCCCGAGATGTTCTTGACCCCCGAGACCTCCACGATACTCGAGACTTTAGAGACCCGAGAGACCTCAGATGTTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000469810.1
ENST00000470212.1
ENST00000474453.6
ENST00000531722.5
CDS CCA 90 bp GGACACTTCTTCCCTGTCCAATCAGTCTTTTTCTTCCCTGGAGCTTaGACAATCTCCTTCCCACTATTAAGGCCTCTGCATTTTCATGGC +
Preference number: 5 (lower is better)
Translates to: GHFFPVQSVFFFPGA*TISFPLLRPLHFHG
Trigger: GCCATGAAAATGCAGAGGCCTTAATAGTGGGAAGGAGATTGTCCAAGCTCCAGGGAAGAAAAAGACTGATTGGACAGGGAAGAAGTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371541.5
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGAATGCTAAAGGAGATTaGCCATGTTTTTCCTTCATG +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQNAKGD*PCFSFM
Trigger: CATGAAGGAAAAACATGGCAAATCTCCTTTAGCATT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTTGACTGGTTTCTTATaGCTTATTTTCCCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQLTGFL*LIFPFS
Trigger: AGAGAAGGGGAAAATAAGCAATAAGAAACCAGTCAA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGATCACATTGAACAGGTaGCTCTCTTTCTGCATTTAT +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQITLNR*LSFCIY
Trigger: ATAAATGCAGAAAGAGAGCAACCTGTTCAATGTGAT...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTCTATTTCACTGCTTTaGCTGGTAGAAAGAGATGAA +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQSISLL*LVERDE
Trigger: TTCATCTCTTTCTACCAGCAAAAGCAGTGAAATAGA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGGAAATCGGTTTGTCATaGGTGGTAGAGGTTTTAAAT +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQEIGLS*VVEVLN
Trigger: ATTTAAAACCTCTACCACCAATGACAAACCGATTTC...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp ACGGATACCCTTGAGACAGCAGGATTGGCTGGTTGCTGTGCATCGGTAGACCAGTTTACTATAGGCACTTaGGCAGTAGTTATAGGCAAA +
Preference number: 5 (lower is better)
Translates to: TDTLETAGLAGCCASVDQFTIGT*AVVIGK
Trigger: TTTGCCTATAACTACTGCCAAAGTGCCTATAGTAAA...CTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257177.9
ENST00000371544.7
CDS-3UTR CAA 90 bp TTGAACTCAGGTCTCCATATTTTAGCTGTCTTTCTTCTGCTGCATTCTACCTCCTGTTTACCAGGGAATTaGGAGCCACAGTACGGGGCC +
Preference number: 5 (lower is better)
Translates to: LNSGLHILAVFLLLHSTSCLPGN*EPQYGA
Trigger: GGCCCCGTACTGTGGCTCCAAATTCCCTGGTAAACA...GGAGGTAGAATGCAGCAGAAGAAAGACAGCTAAAATATGGAGACCTGAGTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527941.5
CDS TCA 90 bp GCTTTGCAGTTGCAAGAGGTAGCAGATGTGTCGGTGCACACACTCTaGTGTGAACTCTCTGTTTCTAAATTTGACCTGCAGTCTGTTCCA +
Preference number: 5 (lower is better)
Translates to: ALQLQEVADVSVHTL*CELSVSKFDLQSVP
Trigger: TGGAACAGACTGCAGGTCAAATTTAGAAACAGAGAGTTCACATCAGAGTGTGTGCACCGACACATCTGCTACCTCTTGCAACTGCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371541.5
ENST00000371544.7
ENST00000484723.6
ENST00000528642.5
CDS-3UTR CAA 90 bp GCATGGGAACTTGAACTCAGGTCTCCATATTTTAGCTGTCTTTCTTCTGCTGCACATGTTCCCAAGGAATaGGAGGAGTCAGTCCTCGAA +
Preference number: 5 (lower is better)
Translates to: AWELELRSPYFSCLSSAAHVPKE*EESVLE
Trigger: TTCGAGGACTGACTCCTCCAATTCCTTGGGAACATG...TGCAGCAGAAGAAAGACAGCTAAAATATGGAGACCTGAGTTCAAGTTCCCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527941.5
CDS-3UTR CAA 90 bp TGGGAACTTGAACTCAGGTCTCCATATTTTAGCTGTCTTTCTTCTGCTGCATTCAGCAAGACTCCATCCTaGAGACAGCAGGATTGGCTG +
Preference number: 5 (lower is better)
Translates to: WELELRSPYFSCLSSAAFSKTPS*RQQDWL
Trigger: CAGCCAATCCTGCTGTCTCAAGGATGGAGTCTTGCT...GAATGCAGCAGAAGAAAGACAGCTAAAATATGGAGACCTGAGTTCAAGTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527941.5
CDS GCA 90 bp CTTATTTCCACCCTTCGTCTGAGGACAGGCAAAATACCGATAAGCTaGCCTAAATCTCTCCACAACATATTCGTAAACCAGCTGGCTGTT +
Preference number: 5 (lower is better)
Translates to: LISTLRLRTGKIPIS*PKSLHNIFVNQLAV
Trigger: AACAGCCAGCTGGTTTACGAATATGTTGTGGAGAGATTTAGGGCAGCTTATCGGTATTTTGCCTGTCCTCAGACGAAGGGTGGAAATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371541.5
ENST00000371544.7
ENST00000484723.6
ENST00000528642.5
CDS-3UTR CAA 90 bp AGCAGCTCTAACCATAACTGTCCCAAGGATACCCGATTTGGTGTTTCCAATGCTTGGTCTGCCTTAGCTTaGTTTTCCTCAGCAATTGAG +
Preference number: 5 (lower is better)
Translates to: SSSNHNCPKDTRFGVSNAWSALA*FSSAIE
Trigger: CTCAATTGCTGAGGAAAACAAAGCTAAGGCAGACCA...AGCATTGGAAACACCAAATCGGGTATCCTTGGGACAGTTATGGTTAGAGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR CAA 90 bp AGCAGCTCTAACCATAACTGTCCCAAGGATACCCGATTTGGTGTTTCCAATGCTCCAAGGATACCCGATTaGGTGTTTCCAATGCTAAAG +
Preference number: 5 (lower is better)
Translates to: SSSNHNCPKDTRFGVSNAPRIPD*VFPMLK
Trigger: CTTTAGCATTGGAAACACCAAATCGGGTATCCTTGG...AGCATTGGAAACACCAAATCGGGTATCCTTGGGACAGTTATGGTTAGAGCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS TCA 90 bp GACGGGTGGCACATCTGTCTGTTGGATACAACACAGACAGGAAACTaGAAGGCTTGTGCCTGTTTATCTGACAACACCTTAGAATTAACT +
Preference number: 5 (lower is better)
Translates to: DGWHICLLDTTQTGN*KACACLSDNTLELT
Trigger: AGTTAATTCTAAGGTGTTGTCAGATAAACAGGCACAAGCCTTTCAGTTTCCTGTCTGTGTTGTATCCAACAGACAGATGTGCCACCCGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466440.1
CDS-3UTR CAA 90 bp TCACCATTAAAGCAAAACAGTAAGAAGGGATTCCACCATCAGTTTGGGAGTCAATTGCCTGTGAAATGGTaGCCTTTTCGGCTTTCACCG +
Preference number: 5 (lower is better)
Translates to: SPLKQNSKKGFHHQFGSQLPVKW*PFRLSP
Trigger: CGGTGAAAGCCGAAAAGGCAACCATTTCACAGGCAA...TTGACTCCCAAACTGATGGTGGAATCCCTTCTTACTGTTTTGCTTTAATGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR CAA 90 bp TCCCCAGTGCCTATCAGAATACCTGGCACAAAACAAGTGCTCAGTGTCTATTTGTTGCCTGTAAACTGGTaGCCTTTTCTGATTTTGCCT +
Preference number: 5 (lower is better)
Translates to: SPVPIRIPGTKQVLSVYLLPVNW*PFLILP
Trigger: AGGCAAAATCAGAAAAGGCAACCAGTTTACAGGCAA...CAAATAGACACTGAGCACTTGTTTTGTGCCAGGTATTCTGATAGGCACTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000355809.4
CDS-3UTR CAA 90 bp AGCAGCTCTAACCATAACTGTCCCAAGGATACCCGATTTGGTGTTTCCAATGCTTTGCCTGTAAACTGGTaGCCTTTTCTGATTTTGCCT +
Preference number: 5 (lower is better)
Translates to: SSSNHNCPKDTRFGVSNALPVNW*PFLILP
Trigger: AGGCAAAATCAGAAAAGGCAACCAGTTTACAGGCAA...AGCATTGGAAACACCAAATCGGGTATCCTTGGGACAGTTATGGTTAGAGCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR CAA 90 bp GGTCAAAGCCTTCAATCCAACTTCCAAGTAAGCAAGGAAGAAGAGGGGGTTTTCCTTCTGCTGGTGAACTaGGTACTTTTTCTGACTTCA +
Preference number: 5 (lower is better)
Translates to: GQSLQSNFQVSKEEEGVFLLLVN*VLFLTS
Trigger: TGAAGTCAGAAAAAGTACCAAGTTCACCAGCAGAAG...GAAAACCCCCTCTTCTTCCTTGCTTACTTGGAAGTTGGATTGAAGGCTTTGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR CAA 90 bp AGCAGCTCTAACCATAACTGTCCCAAGGATACCCGATTTGGTGTTTCCAATGCTGGTATCATCTTTTGGTaGGTCTGCCTTAGCTTTGTT +
Preference number: 5 (lower is better)
Translates to: SSSNHNCPKDTRFGVSNAGIIFW*VCLSFV
Trigger: AACAAAGCTAAGGCAGACCAACCAAAAGATGATACC...AGCATTGGAAACACCAAATCGGGTATCCTTGGGACAGTTATGGTTAGAGCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS TCA 90 bp GATAATCATAAACTCCTGTCCTGCAGAGCTGTTGGGAGGATTACATaGGACATGTATGTAAAGCACTCAGCAGAATGCCTGGCACAAAAT +
Preference number: 5 (lower is better)
Translates to: DNHKLLSCRAVGRIT*DMYVKHSAECLAQN
Trigger: ATTTTGTGCCAGGCATTCTGCTGAGTGCTTTACATACATGTCTCATGTAATCCTCCCAACAGCTCTGCAGGACAGGAGTTTATGATTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371541.5
ENST00000469810.1
CDS GCA 90 bp TCCAATTGTGATATTATAAAATGGCAGATCTCCAGTAGTTTAAATTaGTTCAAGTCCAGTTTAGGCAAGCAAACTGCGAGGCCCGCGAGC +
Preference number: 5 (lower is better)
Translates to: SNCDIIKWQISSSLN*FKSSLGKQTARPAS
Trigger: GCTCGCGGGCCTCGCAGTTTGCTTGCCTAAACTGGACTTGAAGCAATTTAAACTACTGGAGATCTGCCATTTTATAATATCACAATTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257177.9
ENST00000355809.4
ENST00000371544.7
ENST00000473856.5
ENST00000524582.1
ENST00000528642.5
CDS CCA 90 bp ATCAGTTTGCATGACTGTGAGATCCTCAGCAAGAACCCAACGTCTTaGTCACTTTTATTTCTCCTAGAACAATTCCCAACACATAGACGG +
Preference number: 5 (lower is better)
Translates to: ISLHDCEILSKNPTS*SLLFLLEQFPTHRR
Trigger: CCGTCTATGTGTTGGGAATTGTTCTAGGAGAAATAAAAGTGACCAAGACGTTGGGTTCTTGCTGAGGATCTCACAGTCATGCAAACTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469810.1
CDS CCA 90 bp GCCTCACAAATCGTTTTATTGTCCAAAGAAACGAGAGCCCAGACATaGTTCCCATCGTGCAGAACACATACTTCCTATTGCAAACTCAAA +
Preference number: 5 (lower is better)
Translates to: ASQIVLLSKETRAQT*FPSCRTHTSYCKLK
Trigger: TTTGAGTTTGCAATAGGAAGTATGTGTTCTGCACGATGGGAACCATGTCTGGGCTCTCGTTTCTTTGGACAATAAAACGATTTGTGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466440.1
CDS-3UTR CAA 90 bp CAAAAACAAAAGCAAGGGATAGACCATAGTTTGCCAACTCTTGGGATGAATGAATTGCCTGTGAAATGGTaGCCTTTTCGGCTTTCACCG +
Preference number: 5 (lower is better)
Translates to: QKQKQGIDHSLPTLGMNELPVKW*PFRLSP
Trigger: CGGTGAAAGCCGAAAAGGCAACCATTTCACAGGCAA...TTCATTCATCCCAAGAGTTGGCAAACTATGGTCTATCCCTTGCTTTTGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355809.4
CDS-3UTR CAA 90 bp GGTCAAAGCCTTCAATCCAACTTCCAAGTAAGCAAGGAAGAAGAGGGGGTTTTCCATAGATACCGACAATaGGTATATTCTGGTGATCGT +
Preference number: 5 (lower is better)
Translates to: GQSLQSNFQVSKEEEGVFHRYRQ*VYSGDR
Trigger: ACGATCACCAGAATATACCAATTGTCGGTATCTATG...GAAAACCCCCTCTTCTTCCTTGCTTACTTGGAAGTTGGATTGAAGGCTTTGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR CAA 90 bp GGTCAAAGCCTTCAATCCAACTTCCAAGTAAGCAAGGAAGAAGAGGGGGTTTTCTCTCAGTTGCACTACTaGAATTACATTCCCACTTCA +
Preference number: 5 (lower is better)
Translates to: GQSLQSNFQVSKEEEGVFSQLHY*NYIPTS
Trigger: TGAAGTGGGAATGTAATTCAAGTAGTGCAACTGAGA...GAAAACCCCCTCTTCTTCCTTGCTTACTTGGAAGTTGGATTGAAGGCTTTGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR CAA 90 bp GCCTATCAGAATACCTGGCACAAAACAAGTGCTCAGTGTCTATTTGATGAGTGCGCTTCAATATTCACTTaGTCCACAGAAGTAAAGGAG +
Preference number: 5 (lower is better)
Translates to: AYQNTWHKTSAQCLFDECASIFT*STEVKE
Trigger: CTCCTTTACTTCTGTGGACAAAGTGAATATTGAAGC...GCACTCATCAAATAGACACTGAGCACTTGTTTTGTGCCAGGTATTCTGATAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355809.4
CDS-3UTR CAA 90 bp AGCAGCTCTAACCATAACTGTCCCAAGGATACCCGATTTGGTGTTTCCAATGCTAATGCTAAAGGAGATTaGCCATGTTTTTCCTTCATG +
Preference number: 5 (lower is better)
Translates to: SSSNHNCPKDTRFGVSNANAKGD*PCFSFM
Trigger: CATGAAGGAAAAACATGGCAAATCTCCTTTAGCATT...AGCATTGGAAACACCAAATCGGGTATCCTTGGGACAGTTATGGTTAGAGCTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR CAA 90 bp TTGAACTCAGGTCTCCATATTTTAGCTGTCTTTCTTCTGCTGCATTCTACCTCCGGTGGCACATCTGTCTaGAGTATAGAAAGGTTTGTT +
Preference number: 5 (lower is better)
Translates to: LNSGLHILAVFLLLHSTSGGTSV*SIERFV
Trigger: AACAAACCTTTCTATACTCAAGACAGATGTGCCACC...GGAGGTAGAATGCAGCAGAAGAAAGACAGCTAAAATATGGAGACCTGAGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527941.5
CDS TCA 90 bp CACAGTCAGCTCTACAGAACCCATATATACAAAAAGTTGGATCTCTaGATACTTGGGTTTTGCATCCTGGGAATACTGTACTTTCCAACC +
Preference number: 5 (lower is better)
Translates to: HSQLYRTHIYKKLDL*ILGFCILGILYFPT
Trigger: GGTTGGAAAGTACAGTATTCCCAGGATGCAAAACCCAAGTATTCAGAGATCCAACTTTTTGTATATATGGGTTCTGTAGAGCTGACTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466440.1
CDS GCA 90 bp GTGGGGCTAGGGACTTGTAAATTAAGTGAGTCACAGAACAAACTATaGAGGACTCTCACAATAACAAAAGGACTAACATGCCCATCATTT +
Preference number: 5 (lower is better)
Translates to: VGLGTCKLSESQNKL*RTLTITKGLTCPSF
Trigger: AAATGATGGGCATGTTAGTCCTTTTGTTATTGTGAGAGTCCTGCATAGTTTGTTCTGTGACTCACTTAATTTACAAGTCCCTAGCCCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469810.1
ENST00000470212.1
CDS GCA 90 bp CCATATTTTAGCTGTCTTTCTTCTGCTGCATTCTACCTCCACAATTaGAGCTTTCTTACCTTGAGTATAGAAAGGTTTGTTGGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: PYFSCLSSAAFYLHN*SFLTLSIERFVGLE
Trigger: TTCCAGCCCAACAAACCTTTCTATACTCAAGGTAAGAAAGCTGCAATTGTGGAGGTAGAATGCAGCAGAAGAAAGACAGCTAAAATATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528457.5
CDS CCA 90 bp TCAAGTCCCACAGTCAGCTCTACAGAACCCATATATACAAAAAGTTaGATCTCTGAATACTTGGGTTTTGCATCCTGGGAATACTGTACT +
Preference number: 5 (lower is better)
Translates to: SSPTVSSTEPIYTKS*ISEYLGFASWEYCT
Trigger: AGTACAGTATTCCCAGGATGCAAAACCCAAGTATTCAGAGATCCAACTTTTTGTATATATGGGTTCTGTAGAGCTGACTGTGGGACTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466440.1
CDS-3UTR CAA 90 bp CAAAAACAAAAGCAAGGGATAGACCATAGTTTGCCAACTCTTGGGATGAATGAAGGGATAGACCATAGTTaGCCAACTCTTGGGATGAAT +
Preference number: 5 (lower is better)
Translates to: QKQKQGIDHSLPTLGMNEGIDHS*PTLGMN
Trigger: ATTCATCCCAAGAGTTGGCAAACTATGGTCTATCCC...TTCATTCATCCCAAGAGTTGGCAAACTATGGTCTATCCCTTGCTTTTGTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355809.4
CDS GCA 90 bp CTTCTCTGTAGACAGAAACCCAGATCTACATTATTCCAAAAGGAATaGTCATTCCACCTTATGTGCCTAGCAAGGACATATATACAAAGC +
Preference number: 5 (lower is better)
Translates to: LLCRQKPRSTLFQKE*SFHLMCLARTYIQS
Trigger: GCTTTGTATATATGTCCTTGCTAGGCACATAAGGTGGAATGAGCATTCCTTTTGGAATAATGTAGATCTGGGTTTCTGTCTACAGAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469810.1
CDS CCA 90 bp CCTTATGTGCCTAGCAAGGACATATATACAAAGCACTGTGTAATCTaGAAGATTGTATTAGCCAGTCTGAGAGAAAACACTATCACCCAT +
Preference number: 5 (lower is better)
Translates to: PYVPSKDIYTKHCVI*KIVLASLRENTITH
Trigger: ATGGGTGATAGTGTTTTCTCTCAGACTGGCTAATACAATCTTCCAGATTACACAGTGCTTTGTATATATGTCCTTGCTAGGCACATAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469810.1
CDS CCA 90 bp ATTGTTCTAGGTAATAAAAATGTAATACCAACATGTATGCCCTCATaGAGCTCAACGTTTAAGGGGGATAAGGAAGGGAGCAGACAAAGA +
Preference number: 5 (lower is better)
Translates to: IVLGNKNVIPTCMPS*SSTFKGDKEGSRQR
Trigger: TCTTTGTCTGCTCCCTTCCTTATCCCCCTTAAACGTTGAGCTCCATGAGGGCATACATGTTGGTATTACATTTTTATTACCTAGAACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000466440.1
CDS-3UTR CAA 90 bp ATATCGTTTCCTGCACTCACTCTACAAAGTAAACCACTTTTTCGATCTCTGCACAAGACAGGTTCTATTTaGCCAAGGGCAGTAAGTAAA +
Preference number: 5 (lower is better)
Translates to: ISFPALTLQSKPLFRSLHKTGSI*PRAVSK
Trigger: TTTACTTACTGCCCTTGGCAAAATAGAACCTGTCTT...GTGCAGAGATCGAAAAAGTGGTTTACTTTGTAGAGTGAGTGCAGGAAACGATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR CAA 90 bp TCTATTTTGCCAAGGGCAGTAAGTAAATCAGTAGTGAGACATGCCATATCGTTTGATTCCACCATCAGTTaGGGAGTCAATATAGCACAA +
Preference number: 5 (lower is better)
Translates to: SILPRAVSKSVVRHAISFDSTIS*GVNIAQ
Trigger: TTGTGCTATATTGACTCCCAAACTGATGGTGGAATC...AAACGATATGGCATGTCTCACTACTGATTTACTTACTGCCCTTGGCAAAATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR CAA 90 bp TCACCATTAAAGCAAAACAGTAAGAAGGGATTCCACCATCAGTTTGGGAGTCAACTTCATGGCATTACTTaGGTTGTCTGTTTCTGTCTT +
Preference number: 5 (lower is better)
Translates to: SPLKQNSKKGFHHQFGSQLHGIT*VVCFCL
Trigger: AAGACAGAAACAGACAACCAAAGTAATGCCATGAAG...TTGACTCCCAAACTGATGGTGGAATCCCTTCTTACTGTTTTGCTTTAATGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS-3UTR CAA 90 bp ATTTTAGCTGTCTTTCTTCTGCTGCATTCTACCTCCACAATTGCAGCTTTCTTACTGATGCATGAAGTTTaGATGCAAACCATAAGGCCA +
Preference number: 5 (lower is better)
Translates to: ILAVFLLLHSTSTIAAFLLMHEV*MQTIRP
Trigger: TGGCCTTATGGTTTGCATCAAAACTTCATGCATCAG...TAAGAAAGCTGCAATTGTGGAGGTAGAATGCAGCAGAAGAAAGACAGCTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527941.5
CDS CCA 90 bp ATTTCACTGCTTTTGCTGGTAGAAAGAGATGAAGAGTCCTGTCCGTaGTCAGCAAAATCTAGTTCATTTACCAACAAATTGTTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: ISLLLLVERDEESCP*SAKSSSFTNKLLLS
Trigger: TGACAACAACAATTTGTTGGTAAATGAACTAGATTTTGCTGACCACGGACAGGACTCTTCATCTCTTTCTACCAGCAAAAGCAGTGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371541.5
ENST00000371544.7
ENST00000484723.6
ENST00000528642.5
CDS-3UTR CAA 90 bp TCTATTTTGCCAAGGGCAGTAAGTAAATCAGTAGTGAGACATGCCATATCGTTTTGTTTTCCTCAGCAATaGAGTTTTTCTCAGTTGCAC +
Preference number: 5 (lower is better)
Translates to: SILPRAVSKSVVRHAISFCFPQQ*SFSQLH
Trigger: GTGCAACTGAGAAAAACTCAATTGCTGAGGAAAACA...AAACGATATGGCATGTCTCACTACTGATTTACTTACTGCCCTTGGCAAAATAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS TCA 90 bp ATTCCTGCATCTCTTTCAAGATCTAGCTCAACTGTCAAAATCTTGTaGTGTAATAATCTTAAATCCACATCCTGTTTGGATTTGCTAGGG +
Preference number: 5 (lower is better)
Translates to: IPASLSRSSSTVKIL*CNNLKSTSCLDLLG
Trigger: CCCTAGCAAATCCAAACAGGATGTGGATTTAAGATTATTACATCACAAGATTTTGACAGTTGAGCTAGATCTTGAAAGAGATGCAGGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466440.1
CDS-3UTR CAA 90 bp TATCCGTACACATATGACATATTCCTCCAAAGCAAAATCCAGTGTGTAGAATTTGCTTCAATATTCACTTaGTCCACAGAAGTAAAGGAG +
Preference number: 5 (lower is better)
Translates to: YPYTYDIFLQSKIQCVEFASIFT*STEVKE
Trigger: CTCCTTTACTTCTGTGGACAAAGTGAATATTGAAGC...AAATTCTACACACTGGATTTTGCTTTGGAGGAATATGTCATATGTGTACGGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473856.5
CDS CCA 72 bp GGGGCACTGCCTGGTGCAGAGTGGATCACTGGGCCATaGATGGGCCAGGACGGGGCAGGGATCTGGAGAGGG +
Preference number: 6 (lower is better)
Translates to: GALPGAEWITGP*MGQDGAGIWRG
Trigger: CCCTCTCCAGATCCCTGCCCCGTCCTGGCCCATCCATGGCCCAGTGATCCACTCTGCACCAGGCAGTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000466440.1
CDS CCA 72 bp CACTGCCTGGTGCAGAGTGGATCACTGGGCCATGGATaGGCCAGGACGGGGCAGGGATCTGATGGGGAGGTT +
Preference number: 6 (lower is better)
Translates to: HCLVQSGSLGHG*ARTGQGSDGEV
Trigger: AACCTCCCCATCAGATCCCTGCCCCGTCCTGGCCCATCCATGGCCCAGTGATCCACTCTGCACCAGGCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531722.5
CDS TCA 72 bp TGCATGATCCCAGGGGTGTGGATTGTAGGGTTGCAGTaGGCCGAGAACACGCCACTGCACTCCAGCCTAGGC +
Preference number: 6 (lower is better)
Translates to: CMIPGVWIVGLQ*AENTPLHSSLG
Trigger: GCCTAGGCTGGAGTGCAGTGGCGTGTTCTCGGCTCACTGCAACCCTACAATCCACACCCCTGGGATCATGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469810.1
CDS TCA 72 bp CTGCTGCCACACTGCTATTCCTCTGACGGGCCAGCTTaGCCTCTGGGCACTCCCTTCGTACATGTCCAGCAT +
Preference number: 6 (lower is better)
Translates to: LLPHCYSSDGPA*PLGTPFVHVQH
Trigger: ATGCTGGACATGTACGAAGGGAGTGCCCAGAGGTCAAGCTGGCCCGTCAGAGGAATAGCAGTGTGGCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000469810.1
ENST00000470212.1
ENST00000474453.6
ENST00000531722.5
CDS CCA 72 bp GACTCGCATTACTCCGACACGTTTCCTCTTGGTGGGTaGGGACAACGCTCTCTACACCGACGGGTGGCACAT +
Preference number: 6 (lower is better)
Translates to: DSHYSDTFPLGG*GQRSLHRRVAH
Trigger: ATGTGCCACCCGTCGGTGTAGAGAGCGTTGTCCCCACCCACCAAGAGGAAACGTGTCGGAGTAATGCGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000466440.1
ENST00000494469.5
ENST00000527941.5
CDS CCA 72 bp AATGGACTCGCATTACTCCGACACGTTTCCTCTTGGTaGGTGGGGACAACGCTCTCTACACCGACGGGTGGC +
Preference number: 6 (lower is better)
Translates to: NGLALLRHVSSW*VGTTLSTPTGG
Trigger: GCCACCCGTCGGTGTAGAGAGCGTTGTCCCCACCCACCAAGAGGAAACGTGTCGGAGTAATGCGAGTCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000466440.1
ENST00000494469.5
ENST00000527941.5
CDS CAA 90 bp GCAGCAGGCTGTGCAAAGATGATGCTGGGATCATTTAGGCCAATATaGCTGGGGGCACTGCCTGGTGCAGAGTGGATCACTGGGCCATGG +
Preference number: 6 (lower is better)
Translates to: AAGCAKMMLGSFRPI*LGALPGAEWITGPW
Trigger: CCATGGCCCAGTGATCCACTCTGCACCAGGCAGTGCCCCCAGCAATATTGGCCTAAATGATCCCAGCATCATCTTTGCACAGCCTGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000466440.1
ENST00000528457.5
CDS TCA 72 bp GAATTTGGAGCCACAGTACGGGGCCAGTGTCCATCGTaGGACGTGTTAGGGATTGCCACAGGTCTGGCAGCA +
Preference number: 6 (lower is better)
Translates to: EFGATVRGQCPS*DVLGIATGLAA
Trigger: TGCTGCCAGACCTGTGGCAATCCCTAACACGTCTCACGATGGACACTGGCCCCGTACTGTGGCTCCAAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000466440.1
ENST00000494469.5
ENST00000528457.5
CDS GCA 72 bp GAGCTGAACCAGCCACCTGTTGAGCATTTACAAGGTTaGGGACCAGCTGGGCTGCTGCCACACTGCTATTCC +
Preference number: 6 (lower is better)
Translates to: ELNQPPVEHLQG*GPAGLLPHCYS
Trigger: GGAATAGCAGTGTGGCAGCAGCCCAGCTGGTCCGCAACCTTGTAAATGCTCAACAGGTGGCTGGTTCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000469810.1
ENST00000470212.1
ENST00000474453.6
ENST00000531722.5
CDS GCA 72 bp TGCTGGGATCATTTAGGCCAATATTGCTGGGGGCACTaGCTGGTGCAGAGTGGATCACTGGGCCATGGATGG +
Preference number: 6 (lower is better)
Translates to: CWDHLGQYCWGH*LVQSGSLGHGW
Trigger: CCATCCATGGCCCAGTGATCCACTCTGCACCAGGCAGTGCCCCCAGCAATATTGGCCTAAATGATCCCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000466440.1
ENST00000528457.5
ENST00000531722.5
CDS GCA 72 bp ACGGGGCCAGTGTCCATCGTGAGACGTGTTAGGGATTaGCACAGGTCTGGCAGCAGGCTGTGCAAAGATGAT +
Preference number: 6 (lower is better)
Translates to: TGPVSIVRRVRD*HRSGSRLCKDD
Trigger: ATCATCTTTGCACAGCCTGCTGCCAGACCTGTGGCAATCCCTAACACGTCTCACGATGGACACTGGCCCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000466440.1
ENST00000528457.5
CDS CCA 72 bp CACACTGCTATTCCTCTGACGGGCCAGCTTGACCTCTaGGCACTCCCTTCGTACATGTCCAGCATCTCCACA +
Preference number: 6 (lower is better)
Translates to: HTAIPLTGQLDL*ALPSYMSSIST
Trigger: TGTGGAGATGCTGGACATGTACGAAGGGAGTGCCCAGAGGTCAAGCTGGCCCGTCAGAGGAATAGCAGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000469810.1
ENST00000470212.1
ENST00000474453.6
ENST00000531722.5
CDS CAA 72 bp GGGGGAAATGGGGACGCGGTGCATGTTCCCAAGGAATaGGAGGAGTCAGTCCTCGAAAGCCTGGCTCTGAAT +
Preference number: 6 (lower is better)
Translates to: GGNGDAVHVPKE*EESVLESLALN
Trigger: ATTCAGAGCCAGGCTTTCGAGGACTGACTCCTCCAATTCCTTGGGAACATGCACCGCGTCCCCATTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000466440.1
ENST00000471623.1
ENST00000494469.5
ENST00000527941.5
ENST00000528457.5
CDS CAA 90 bp CCAGCTGAAAGAAAATGGACTCGCATTACTCCGACACGTTTCCTCTaGGTGGGTGGGGACAACGCTCTCTACACCGACGGGTGGCACATC +
Preference number: 6 (lower is better)
Translates to: PAERKWTRITPTRFL*VGGDNALYTDGWHI
Trigger: GATGTGCCACCCGTCGGTGTAGAGAGCGTTGTCCCCACCCACCAAGAGGAAACGTGTCGGAGTAATGCGAGTCCATTTTCTTTCAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000466440.1
ENST00000494469.5
ENST00000527941.5
CDS CCA 72 bp GAAAATGGACTCGCATTACTCCGACACGTTTCCTCTTaGTGGGTGGGGACAACGCTCTCTACACCGACGGGT +
Preference number: 6 (lower is better)
Translates to: ENGLALLRHVSS*WVGTTLSTPTG
Trigger: ACCCGTCGGTGTAGAGAGCGTTGTCCCCACCCACCAAGAGGAAACGTGTCGGAGTAATGCGAGTCCATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000466440.1
ENST00000494469.5
ENST00000527941.5
CDS CCA 72 bp TTGGTGGGTGGGGACAACGCTCTCTACACCGACGGGTaGCACATCTGTCTGTTGGATACAACACAGACAGGA +
Preference number: 6 (lower is better)
Translates to: LVGGDNALYTDG*HICLLDTTQTG
Trigger: TCCTGTCTGTGTTGTATCCAACAGACAGATGTGCCACCCGTCGGTGTAGAGAGCGTTGTCCCCACCCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466440.1
CDS CAA 72 bp CTGAATTCCCCACTGCACCACTGTTTACCAGGGAATTaGGAGCCACAGTACGGGGCCAGTGTCCATCGTGAG +
Preference number: 6 (lower is better)
Translates to: LNSPLHHCLPGN*EPQYGASVHRE
Trigger: CTCACGATGGACACTGGCCCCGTACTGTGGCTCCAAATTCCCTGGTAAACAGTGGTGCAGTGGGGAATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000466440.1
ENST00000494469.5
ENST00000527941.5
ENST00000528457.5
CDS CAA 72 bp AGAAAATGGACTCGCATTACTCCGACACGTTTCCTCTaGGTGGGTGGGGACAACGCTCTCTACACCGACGGG +
Preference number: 6 (lower is better)
Translates to: RKWTRITPTRFL*VGGDNALYTDG
Trigger: CCCGTCGGTGTAGAGAGCGTTGTCCCCACCCACCAAGAGGAAACGTGTCGGAGTAATGCGAGTCCATTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000466440.1
ENST00000494469.5
ENST00000527941.5
CDS TCA 72 bp GGATTGCCACAGGTCTGGCAGCAGGCTGTGCAAAGATaGTGCTGGGATCATTTAGGCCAATATTGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: GLPQVWQQAVQR*CWDHLGQYCWG
Trigger: CCCCCAGCAATATTGGCCTAAATGATCCCAGCATCATCTTTGCACAGCCTGCTGCCAGACCTGTGGCAATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000466440.1
ENST00000528457.5
CDS CCA 72 bp CTGAGGTCTCTCGGGTCTCTAAAGTCTCGAGTATCGTaGAGGTCTCGGGGGTCAAGAACATCTCGGGAATCT +
Preference number: 6 (lower is better)
Translates to: LRSLGSLKSRVS*RSRGSRTSRES
Trigger: AGATTCCCGAGATGTTCTTGACCCCCGAGACCTCCACGATACTCGAGACTTTAGAGACCCGAGAGACCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000469810.1
ENST00000470212.1
ENST00000474453.6
ENST00000531722.5
CDS CCA 72 bp AGAGGCGATACTGACACCACTACAGATGCCAGAAGCTaGGCCTCACCCCAATCTTGCAAACAGTCCCGCATT +
Preference number: 6 (lower is better)
Translates to: RGDTDTTTDARS*ASPQSCKQSRI
Trigger: AATGCGGGACTGTTTGCAAGATTGGGGTGAGGCCCAGCTTCTGGCATCTGTAGTGGTGTCAGTATCGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371541.5
CDS GCA 72 bp CCTGCAGTTCAGCTACTCAGGAGATGGAGACAGAATTaGATGATCCCAGGGGTGTGGATTGTAGGGTTGCAG +
Preference number: 6 (lower is better)
Translates to: PAVQLLRRWRQN*MIPGVWIVGLQ
Trigger: CTGCAACCCTACAATCCACACCCCTGGGATCATGCAATTCTGTCTCCATCTCCTGAGTAGCTGAACTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469810.1
CDS CAA 72 bp GCCTGCAGTTCAGCTACTCAGGAGATGGAGACAGAATaGCATGATCCCAGGGGTGTGGATTGTAGGGTTGCA +
Preference number: 6 (lower is better)
Translates to: ACSSATQEMETE*HDPRGVDCRVA
Trigger: TGCAACCCTACAATCCACACCCCTGGGATCATGCAATTCTGTCTCCATCTCCTGAGTAGCTGAACTGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469810.1
CDS GCA 72 bp GGTACGGATACCCTTGAGACAGCAGGATTGGCTGGTTaGTGTGCATCGGTAGACCAGCTTGAGTATAGAAAG +
Preference number: 6 (lower is better)
Translates to: GTDTLETAGLAG*CASVDQLEYRK
Trigger: CTTTCTATACTCAAGCTGGTCTACCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471623.1
CDS CCA 72 bp GGAGAGGGTGCATTGGCAACAATCCCATATTGTGCATaGGAGAATACTGAGCTGGTGGTGACTGGGGAAAGT +
Preference number: 6 (lower is better)
Translates to: GEGALATIPYCA*ENTELVVTGES
Trigger: ACTTTCCCCAGTCACCACCAGCTCAGTATTCTCCCATGCACAATATGGGATTGTTGCCAATGCACCCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000466440.1
CDS CAA 72 bp GGGCTGGAATCGGGCATTTCCCTGATGCATGAAGTTTaGATGCAAACCATAAGGCCACGAAGCTGGGACAAG +
Preference number: 6 (lower is better)
Translates to: GLESGISLMHEV*MQTIRPRSWDK
Trigger: CTTGTCCCAGCTTCGTGGCCTTATGGTTTGCATCAAAACTTCATGCATCAGGGAAATGCCCGATTCCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000466440.1
ENST00000471623.1
ENST00000494469.5
ENST00000527941.5
ENST00000528457.5
CDS CAA 90 bp AGGTTTGTTGGGCTGGAATCGGGCATTTCCCTGATGCATGAAGTTTaGATGCAAACCATAAGGCCACGAAGCTGGGACAAGGGGGAAATG +
Preference number: 6 (lower is better)
Translates to: RFVGLESGISLMHEV*MQTIRPRSWDKGEM
Trigger: CATTTCCCCCTTGTCCCAGCTTCGTGGCCTTATGGTTTGCATCAAAACTTCATGCATCAGGGAAATGCCCGATTCCAGCCCAACAAACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000466440.1
ENST00000471623.1
ENST00000494469.5
ENST00000527941.5
ENST00000528457.5
CDS TCA 72 bp TCTAGTCCTTATGGACTGATCACCCTGTTGCTGAGCTaGACCAGCCACCTGTTGAGCATTTACAAGGTTGCG +
Preference number: 6 (lower is better)
Translates to: SSPYGLITLLLS*TSHLLSIYKVA
Trigger: CGCAACCTTGTAAATGCTCAACAGGTGGCTGGTTCAGCTCAGCAACAGGGTGATCAGTCCATAAGGACTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000469810.1
ENST00000470212.1
ENST00000474453.6
ENST00000531722.5
CDS TCA 72 bp TCCCATATTGTGCATGGGAGAATACTGAGCTGGTGGTaGCTGGGGAAAGTTATACAGTGGCATCTGGACCTG +
Preference number: 6 (lower is better)
Translates to: SHIVHGRILSWW*LGKVIQWHLDL
Trigger: CAGGTCCAGATGCCACTGTATAACTTTCCCCAGTCACCACCAGCTCAGTATTCTCCCATGCACAATATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000466440.1
ENST00000474453.6
CDS TCA 72 bp ACATCTACAAGGATACCCTCCTTTGCTAGTTGCTGTTaGGAAGGCCTGGGACACTTCTTCCCTGTCCAATCA +
Preference number: 6 (lower is better)
Translates to: TSTRIPSFASCC*EGLGHFFPVQS
Trigger: TGATTGGACAGGGAAGAAGTGTCCCAGGCCTTCTCAACAGCAACTAGCAAAGGAGGGTATCCTTGTAGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371541.5
CDS GCA 72 bp CCTCTGGGCAATCATTCTTTGAATGGCCATCCTTTTTaGAGATGCTGCATACTATCGTTGGTGGCTTGCCAG +
Preference number: 6 (lower is better)
Translates to: PLGNHSLNGHPF*RCCILSLVACQ
Trigger: CTGGCAAGCCACCAACGATAGTATGCAGCATCTGCAAAAAGGATGGCCATTCAAAGAATGATTGCCCAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371541.5
ENST00000371544.7
ENST00000484723.6
ENST00000528642.5
CDS GCA 72 bp TTGCTCAAGAGAAGAGCTCAACCACAGTCAAGGCTCTaGCACTCTACAATACAGGGATGCCCCAGTAGTATA +
Preference number: 6 (lower is better)
Translates to: LLKRRAQPQSRL*HSTIQGCPSSI
Trigger: TATACTACTGGGGCATCCCTGTATTGTAGAGTGGCAGAGCCTTGACTGTGGTTGAGCTCTTCTCTTGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466440.1
CDS CAA 90 bp GGGACACTTCTTCCCTGTCCAATCAGTCTTTTTCTTCCCTGGAGCTaGGACAATCTCCTTCCCACTATTAAGGCCTCTGCATTTTCATGG +
Preference number: 6 (lower is better)
Translates to: GTLLPCPISLFLPWS*DNLLPTIKASAFSW
Trigger: CCATGAAAATGCAGAGGCCTTAATAGTGGGAAGGAGATTGTCCAAGCTCCAGGGAAGAAAAAGACTGATTGGACAGGGAAGAAGTGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371541.5
CDS GCA 72 bp TCTAAGCGTTCTTCTGCTTGTTTCAACCCCAGCCTCTaGTCAGGTGTCAATGCAGATTCATCTATCACAGTG +
Preference number: 6 (lower is better)
Translates to: SKRSSACFNPSL*SGVNADSSITV
Trigger: CACTGTGATAGATGAATCTGCATTGACACCTGAGCAGAGGCTGGGGTTGAAACAAGCAGAAGAACGCTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257177.9
ENST00000355809.4
ENST00000371541.5
ENST00000371544.7
ENST00000473856.5
ENST00000484723.6
ENST00000528642.5
CDS CCA 72 bp TTCCCTGTCCAATCAGTCTTTTTCTTCCCTGGAGCTTaGACAATCTCCTTCCCACTATTAAGGCCTCTGCAT +
Preference number: 6 (lower is better)
Translates to: FPVQSVFFFPGA*TISFPLLRPLH
Trigger: ATGCAGAGGCCTTAATAGTGGGAAGGAGATTGTCCAAGCTCCAGGGAAGAAAAAGACTGATTGGACAGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371541.5
CDS CAA 72 bp TCATTAAGGTCAGAAGCATCTTCTGTAGCTTTGCAGTaGCAAGAGGTAGCAGATGTGTCGGTGCACACACTC +
Preference number: 6 (lower is better)
Translates to: SLRSEASSVALQ*QEVADVSVHTL
Trigger: GAGTGTGTGCACCGACACATCTGCTACCTCTTGCAACTGCAAAGCTACAGAAGATGCTTCTGACCTTAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371541.5
ENST00000371544.7
ENST00000484723.6
ENST00000528642.5
CDS CAA 72 bp TCCTCTGGGCAATCATTCTTTGAATGGCCATCCTTTTaGCAGATGCTGCATACTATCGTTGGTGGCTTGCCA +
Preference number: 6 (lower is better)
Translates to: SSGQSFFEWPSF*QMLHTIVGGLP
Trigger: TGGCAAGCCACCAACGATAGTATGCAGCATCTGCAAAAAGGATGGCCATTCAAAGAATGATTGCCCAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371541.5
ENST00000371544.7
ENST00000484723.6
ENST00000528642.5
CDS CAA 72 bp GCTGCATTCTACCTCCACAATTGCAGCTTTCTTACCTaGAGTATAGAAAGGTTTGTTGGGCTGGAATCGGGC +
Preference number: 6 (lower is better)
Translates to: AAFYLHNCSFLT*SIERFVGLESG
Trigger: GCCCGATTCCAGCCCAACAAACCTTTCTATACTCAAGGTAAGAAAGCTGCAATTGTGGAGGTAGAATGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528457.5
CDS CAA 90 bp CTTTCTTCTGCTGCATTCTACCTCCACAATTGCAGCTTTCTTACCTaGAGTATAGAAAGGTTTGTTGGGCTGGAATCGGGCATTTCCCTG +
Preference number: 6 (lower is better)
Translates to: LSSAAFYLHNCSFLT*SIERFVGLESGISL
Trigger: CAGGGAAATGCCCGATTCCAGCCCAACAAACCTTTCTATACTCAAGGTAAGAAAGCTGCAATTGTGGAGGTAGAATGCAGCAGAAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528457.5
CDS TCA 72 bp TTGCAAGAGGTAGCAGATGTGTCGGTGCACACACTCTaGTGTGAACTCTCTGTTTCTAAATTTGACCTGCAG +
Preference number: 6 (lower is better)
Translates to: LQEVADVSVHTL*CELSVSKFDLQ
Trigger: CTGCAGGTCAAATTTAGAAACAGAGAGTTCACATCAGAGTGTGTGCACCGACACATCTGCTACCTCTTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371541.5
ENST00000371544.7
ENST00000484723.6
ENST00000528642.5
CDS GCA 72 bp ACCCTTCGTCTGAGGACAGGCAAAATACCGATAAGCTaGCCTAAATCTCTCCACAACATATTCGTAAACCAG +
Preference number: 6 (lower is better)
Translates to: TLRLRTGKIPIS*PKSLHNIFVNQ
Trigger: CTGGTTTACGAATATGTTGTGGAGAGATTTAGGGCAGCTTATCGGTATTTTGCCTGTCCTCAGACGAAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371541.5
ENST00000371544.7
ENST00000484723.6
ENST00000528642.5
CDS GCA 72 bp GGCAATCATTCTTTGAATGGCCATCCTTTTTGCAGATaGTGCATACTATCGTTGGTGGCTTGCCAGAGGTTA +
Preference number: 6 (lower is better)
Translates to: GNHSLNGHPFCR*CILSLVACQRL
Trigger: TAACCTCTGGCAAGCCACCAACGATAGTATGCAGCATCTGCAAAAAGGATGGCCATTCAAAGAATGATTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371541.5
ENST00000371544.7
ENST00000484723.6
ENST00000528642.5
CDS CAA 72 bp ACCAGCTGGCTGTTTAAGCTCCGTGCAACATTCCTCTaGACTGAAAATGGATCTTCAATGGCTATTCGCCTT +
Preference number: 6 (lower is better)
Translates to: TSWLFKLRATFL*TENGSSMAIRL
Trigger: AAGGCGAATAGCCATTGAAGATCCATTTTCAGTCAAGAGGAATGTTGCACGGAGCTTAAACAGCCAGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371541.5
ENST00000371544.7
ENST00000484723.6
ENST00000528642.5
CDS CAA 72 bp GCAGCTCTAACCATAACTGTCCCAAGGATACCCGATTaGGTGTTTCCAATGCTAAAGGAGACCAACTTCCAA +
Preference number: 6 (lower is better)
Translates to: AALTITVPRIPD*VFPMLKETNFQ
Trigger: TTGGAAGTTGGTCTCCTTTAGCATTGGAAACACCAAATCGGGTATCCTTGGGACAGTTATGGTTAGAGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528642.5
CDS GCA 72 bp TCCAAAGAAACGAGAGCCCAGACATGGTTCCCATCGTaGAGAACACATACTTCCTATTGCAAACTCAAAACT +
Preference number: 6 (lower is better)
Translates to: SKETRAQTWFPS*RTHTSYCKLKT
Trigger: AGTTTTGAGTTTGCAATAGGAAGTATGTGTTCTGCACGATGGGAACCATGTCTGGGCTCTCGTTTCTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466440.1
CDS CCA 72 bp ATCATTTCCTATTCCCTCAATTCTTACTCTTCAGAATaGAGAAGGGCAGCCACTTTCCAAGTAGGTGGCTCT +
Preference number: 6 (lower is better)
Translates to: IISYSLNSYSSE*RRAATFQVGGS
Trigger: AGAGCCACCTACTTGGAAAGTGGCTGCCCTTCTCCATTCTGAAGAGTAAGAATTGAGGGAATAGGAAATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371541.5
CDS CCA 72 bp ATCGTTTTATTGTCCAAAGAAACGAGAGCCCAGACATaGTTCCCATCGTGCAGAACACATACTTCCTATTGC +
Preference number: 6 (lower is better)
Translates to: IVLLSKETRAQT*FPSCRTHTSYC
Trigger: GCAATAGGAAGTATGTGTTCTGCACGATGGGAACCATGTCTGGGCTCTCGTTTCTTTGGACAATAAAACGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466440.1
CDS CAA 90 bp TTCCTAAAATCCTCTGGGCAATCATTCTTTGAATGGCCATCCTTTTaGCAGATGCTGCATACTATCGTTGGTGGCTTGCCAGAGGTTAAA +
Preference number: 6 (lower is better)
Translates to: FLKSSGQSFFEWPSF*QMLHTIVGGLPEVK
Trigger: TTTAACCTCTGGCAAGCCACCAACGATAGTATGCAGCATCTGCAAAAAGGATGGCCATTCAAAGAATGATTGCCCAGAGGATTTTAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371541.5
ENST00000371544.7
ENST00000484723.6
ENST00000528642.5
CDS CCA 72 bp CATGACTGTGAGATCCTCAGCAAGAACCCAACGTCTTaGTCACTTTTATTTCTCCTAGAACAATTCCCAACA +
Preference number: 6 (lower is better)
Translates to: HDCEILSKNPTS*SLLFLLEQFPT
Trigger: TGTTGGGAATTGTTCTAGGAGAAATAAAAGTGACCAAGACGTTGGGTTCTTGCTGAGGATCTCACAGTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469810.1
CDS CAA 72 bp GGCAAGGGAACAAACATTTATGGCACACCTGCTCATTaGGCAGGAACTCGGTTTTCCAGTAGTTTTGTAAAA +
Preference number: 6 (lower is better)
Translates to: GKGTNIYGTPAH*AGTRFSSSFVK
Trigger: TTTTACAAAACTACTGGAAAACCGAGTTCCTGCCAAATGAGCAGGTGTGCCATAAATGTTTGTTCCCTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469810.1
ENST00000470212.1
CDS TCA 72 bp GTCGTTATAACCTTTGACATTTCCTCCACAATTTCCTaGCGGACTCTGAGGTCATCATCTGTTATTCCATGT +
Preference number: 6 (lower is better)
Translates to: VVITFDISSTIS*RTLRSSSVIPC
Trigger: ACATGGAATAACAGATGATGACCTCAGAGTCCGTCAGGAAATTGTGGAGGAAATGTCAAAGGTTATAACGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371541.5
ENST00000371544.7
ENST00000484723.6
ENST00000528642.5
CDS GCA 72 bp TTCTGTGGTTTCCCCAAGCAGAATACAACCATTGGTTaGCATATTGTTCGACTTGACTGGTTTCTTATTGCT +
Preference number: 6 (lower is better)
Translates to: FCGFPKQNTTIG*HIVRLDWFLIA
Trigger: AGCAATAAGAAACCAGTCAAGTCGAACAATATGGCAACCAATGGTTGTATTCTGCTTGGGGAAACCACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371541.5
ENST00000371544.7
ENST00000484723.6
ENST00000528642.5
CDS GCA 72 bp AATCATTCTTTGAATGGCCATCCTTTTTGCAGATGCTaGATACTATCGTTGGTGGCTTGCCAGAGGTTAAAA +
Preference number: 6 (lower is better)
Translates to: NHSLNGHPFCRC*ILSLVACQRLK
Trigger: TTTTAACCTCTGGCAAGCCACCAACGATAGTATGCAGCATCTGCAAAAAGGATGGCCATTCAAAGAATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371541.5
ENST00000371544.7
ENST00000484723.6
ENST00000528642.5
CDS GCA 72 bp AAAATACAAAAATTAGCTGGGCGTGATAGTATTGCCTaGAGTTCAGCTACTCAGGAGATGGAGACAGAATTG +
Preference number: 6 (lower is better)
Translates to: KIQKLAGRDSIA*SSATQEMETEL
Trigger: CAATTCTGTCTCCATCTCCTGAGTAGCTGAACTGCAGGCAATACTATCACGCCCAGCTAATTTTTGTATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469810.1
CDS CAA 90 bp CCTTCTAACCCACTTCGCCTGTGTTCAAATTTTACTATAGGCACTTaGGCAGTAGTTATAGGCAAAATGTTTCTTAAACCTGGATGTCTC +
Preference number: 6 (lower is better)
Translates to: PSNPLRLCSNFTIGT*AVVIGKMFLKPGCL
Trigger: GAGACATCCAGGTTTAAGAAACATTTTGCCTATAACTACTGCCAAAGTGCCTATAGTAAAATTTGAACACAGGCGAAGTGGGTTAGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000484723.6
ENST00000497120.1
ENST00000528642.5
CDS TCA 72 bp GAATCACCAGTATTATCTGTACATGTCTGTTGCTTCTaGGATCGTGGTGAGTTTTGCAGAGCACATTTTTCT +
Preference number: 6 (lower is better)
Translates to: ESPVLSVHVCCF*DRGEFCRAHFS
Trigger: AGAAAAATGTGCTCTGCAAAACTCACCACGATCTCAGAAGCAACAGACATGTACAGATAATACTGGTGATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000257177.9
ENST00000355809.4
ENST00000371541.5
ENST00000371544.7
ENST00000473856.5
ENST00000528642.5
CDS GCA 72 bp AGACAGAAACCCAGATCTACATTATTCCAAAAGGAATaGTCATTCCACCTTATGTGCCTAGCAAGGACATAT +
Preference number: 6 (lower is better)
Translates to: RQKPRSTLFQKE*SFHLMCLARTY
Trigger: ATATGTCCTTGCTAGGCACATAAGGTGGAATGAGCATTCCTTTTGGAATAATGTAGATCTGGGTTTCTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469810.1
CDS GCA 72 bp AGCTGTCTTTCTTCTGCTGCATTCTACCTCCACAATTaGAGCTTTCTTACCTTGAGTATAGAAAGGTTTGTT +
Preference number: 6 (lower is better)
Translates to: SCLSSAAFYLHN*SFLTLSIERFV
Trigger: AACAAACCTTTCTATACTCAAGGTAAGAAAGCTGCAATTGTGGAGGTAGAATGCAGCAGAAGAAAGACAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528457.5
CDS CCA 72 bp CTTTTGCTGGTAGAAAGAGATGAAGAGTCCTGTCCGTaGTCAGCAAAATCTAGTTCATTTACCAACAAATTG +
Preference number: 6 (lower is better)
Translates to: LLLVERDEESCP*SAKSSSFTNKL
Trigger: CAATTTGTTGGTAAATGAACTAGATTTTGCTGACCACGGACAGGACTCTTCATCTCTTTCTACCAGCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371541.5
ENST00000371544.7
ENST00000484723.6
ENST00000528642.5
CDS CAA 72 bp TGTTTCTTATCTAATTTTGGCTCTATTTCACTGCTTTaGCTGGTAGAAAGAGATGAAGAGTCCTGTCCGTGG +
Preference number: 6 (lower is better)
Translates to: CFLSNFGSISLL*LVERDEESCPW
Trigger: CCACGGACAGGACTCTTCATCTCTTTCTACCAGCAAAAGCAGTGAAATAGAGCCAAAATTAGATAAGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371541.5
ENST00000371544.7
ENST00000484723.6
ENST00000528642.5
CDS CAA 90 bp AGCTCTACAGAACCCATATATACAAAAAGTTGGATCTCTGAATACTaGGGTTTTGCATCCTGGGAATACTGTACTTTCCAACCACAATCT +
Preference number: 6 (lower is better)
Translates to: SSTEPIYTKSWISEY*GFASWEYCTFQPQS
Trigger: AGATTGTGGTTGGAAAGTACAGTATTCCCAGGATGCAAAACCCAAGTATTCAGAGATCCAACTTTTTGTATATATGGGTTCTGTAGAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466440.1
CDS TCA 72 bp TTCTTGTGTTATGTTGAGCCAACGTATTATATAAACTaGTATCGCCTTCTAACCCACTTCGCCTGTGTTCAA +
Preference number: 6 (lower is better)
Translates to: FLCYVEPTYYIN*YRLLTHFACVQ
Trigger: TTGAACACAGGCGAAGTGGGTTAGAAGGCGATATCAGTTTATATAATACGTTGGCTCAACATAACACAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257177.9
ENST00000371544.7
ENST00000481528.1
ENST00000484723.6
ENST00000497120.1
ENST00000528642.5
CDS TCA 72 bp CTCTACAGAACCCATATATACAAAAAGTTGGATCTCTaGATACTTGGGTTTTGCATCCTGGGAATACTGTAC +
Preference number: 6 (lower is better)
Translates to: LYRTHIYKKLDL*ILGFCILGILY
Trigger: GTACAGTATTCCCAGGATGCAAAACCCAAGTATTCAGAGATCCAACTTTTTGTATATATGGGTTCTGTAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466440.1
CDS CCA 72 bp CCTAGCAAGGACATATATACAAAGCACTGTGTAATCTaGAAGATTGTATTAGCCAGTCTGAGAGAAAACACT +
Preference number: 6 (lower is better)
Translates to: PSKDIYTKHCVI*KIVLASLRENT
Trigger: AGTGTTTTCTCTCAGACTGGCTAATACAATCTTCCAGATTACACAGTGCTTTGTATATATGTCCTTGCTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469810.1
CDS CAA 72 bp AGCAGAATACAACCATTGGTTGCCATATTGTTCGACTaGACTGGTTTCTTATTGCTTATTTTCCCCTTCTCT +
Preference number: 6 (lower is better)
Translates to: SRIQPLVAILFD*TGFLLLIFPFS
Trigger: AGAGAAGGGGAAAATAAGCAATAAGAAACCAGTCAAGTCGAACAATATGGCAACCAATGGTTGTATTCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371541.5
ENST00000371544.7
ENST00000484723.6
ENST00000528642.5
CDS CAA 90 bp GAGTCCTGTCCGTGGTCAGCAAAATCTAGTTCATTTACCAACAAATaGTTGTTGTCAATAATACATCTCTGTGATGTACAGTCCATTTCA +
Preference number: 6 (lower is better)
Translates to: ESCPWSAKSSSFTNK*LLSIIHLCDVQSIS
Trigger: TGAAATGGACTGTACATCACAGAGATGTATTATTGACAACAACAATTTGTTGGTAAATGAACTAGATTTTGCTGACCACGGACAGGACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371541.5
ENST00000371544.7
ENST00000484723.6
ENST00000528642.5
CDS TCA 72 bp TTTCTACTCTTTTTCATTATGCCAGGCAAAACTCAGTaGCTGCATATATTAATCCCTCAGCTAAGCATACTC +
Preference number: 6 (lower is better)
Translates to: FLLFFIMPGKTQ*LHILIPQLSIL
Trigger: GAGTATGCTTAGCTGAGGGATTAATATATGCAGTCACTGAGTTTTGCCTGGCATAATGAAAAAGAGTAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466440.1
CDS CAA 90 bp TCCTGTCCGTGGTCAGCAAAATCTAGTTCATTTACCAACAAATTGTaGTTGTCAATAATACATCTCTGTGATGTACAGTCCATTTCATCA +
Preference number: 6 (lower is better)
Translates to: SCPWSAKSSSFTNKL*LSIIHLCDVQSISS
Trigger: TGATGAAATGGACTGTACATCACAGAGATGTATTATTGACAACAACAATTTGTTGGTAAATGAACTAGATTTTGCTGACCACGGACAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371541.5
ENST00000371544.7
ENST00000484723.6
ENST00000528642.5
CDS CAA 90 bp TGTCCGTGGTCAGCAAAATCTAGTTCATTTACCAACAAATTGTTGTaGTCAATAATACATCTCTGTGATGTACAGTCCATTTCATCACAT +
Preference number: 6 (lower is better)
Translates to: CPWSAKSSSFTNKLL*SIIHLCDVQSISSH
Trigger: ATGTGATGAAATGGACTGTACATCACAGAGATGTATTATTGACAACAACAATTTGTTGGTAAATGAACTAGATTTTGCTGACCACGGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371541.5
ENST00000371544.7
ENST00000484723.6
ENST00000528642.5
CDS CAA 72 bp ATAAACTTTTCCAAGCCAATTAAAATTTGCTCCCTGTaGTGTTGTTCAGAACAAGGTGGTGATAACTCATCA +
Preference number: 6 (lower is better)
Translates to: INFSKPIKICSL*CCSEQGGDNSS
Trigger: TGATGAGTTATCACCACCTTGTTCTGAACAACACAACAGGGAGCAAATTTTAATTGGCTTGGAAAAGTTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371541.5
ENST00000371544.7
ENST00000484723.6
ENST00000528642.5
CDS CAA 72 bp GGGTTGAAAGGAAAGATTAACTATATTTTAGGCATGTaGACGTGCTTTGTTAGACATCAGAATAGCAATGTC +
Preference number: 6 (lower is better)
Translates to: GLKGKINYILGM*TCFVRHQNSNV
Trigger: GACATTGCTATTCTGATGTCTAACAAAGCACGTCAACATGCCTAAAATATAGTTAATCTTTCCTTTCAACCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466440.1
ENST00000469810.1
CDS CAA 72 bp ATAAACTTTTCCAAGCCAATTAAAATTTGCTCCCTGTaGTGTTGTTCAGAACAAGGTGGTGATAACTCATCT +
Preference number: 6 (lower is better)
Translates to: INFSKPIKICSL*CCSEQGGDNSS
Trigger: AGATGAGTTATCACCACCTTGTTCTGAACAACACAACAGGGAGCAAATTTTAATTGGCTTGGAAAAGTTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481133.1
CDS TCA 72 bp TACCAACAAATTGTTGTTGTCAATAATACATCTCTGTaGTGTACAGTCCATTTCATCACATTGAACAGGTTG +
Preference number: 6 (lower is better)
Translates to: YQQIVVVNNTSL*CTVHFITLNRL
Trigger: CAACCTGTTCAATGTGATGAAATGGACTGTACATCACAGAGATGTATTATTGACAACAACAATTTGTTGGTA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257177.9
ENST00000371541.5
ENST00000371544.7
ENST00000484723.6
ENST00000528642.5