Pregenerated sensors for TUSC8 (Homo sapiens)
Ensembl gene IDs: ENSG00000237361Ensembl transcript IDs: ENST00000432701.2, ENST00000607312.1, ENST00000660135.1
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTCCACCGGAAGGGACAGCCTCAGAGCCTGAAGAATGCCAGCCTTTaGACTCCTGCGCTCGGAGGTTCTCCTGAGCTACCTGGGGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: LHRKGQPQSLKNASL*TPALGGSPELPGVQ Trigger: CTGCACCCCAGGTAGCTCAGGAGAACCTCCGAGCGCAGGAGTGCAAAGGCTGGCATTCTTCAGGCTCTGAGGCTGTCCCTTCCGGTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432701.2 ENST00000607312.1 |
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| CDS TCA 90 bp | CTCAGTAAGGCGGAAAGCCAGGTGGGTTGGAGCCCCACCCTTTCCTaGGCTCTCAGGCTGAGGCTCCTGAAGGCTTCAGGAGCACAGCAG | + |
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Preference number: 5 (lower is better) Translates to: LSKAESQVGWSPTLS*ALRLRLLKASGAQQ Trigger: CTGCTGTGCTCCTGAAGCCTTCAGGAGCCTCAGCCTGAGAGCTCAGGAAAGGGTGGGGCTCCAACCCACCTGGCTTTCCGCCTTACTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660135.1 |
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| CDS GCA 90 bp | GCTTCAGGAGCACAGCAGCACCTTGTTGACCTGCAGCACCCTGCCTaGTTGGCCCGGTCTCTTCACGCTGTCGCTCAGTGCACAATTGAA | + |
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Preference number: 5 (lower is better) Translates to: ASGAQQHLVDLQHPA*LARSLHAVAQCTIE Trigger: TTCAATTGTGCACTGAGCGACAGCGTGAAGAGACCGGGCCAAGCAGGCAGGGTGCTGCAGGTCAACAAGGTGCTGCTGTGCTCCTGAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660135.1 |
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| CDS GCA 90 bp | GTGAGGGCTTCCCTCCACGTGTTGGCTCAGTTGTCTGGGTTCTGCTaGCATCCCAACACTAGGTCGCCTGTGCACAGAGAAATGCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: VRASLHVLAQLSGFC*HPNTRSPVHREMPG Trigger: CCCTGGCATTTCTCTGTGCACAGGCGACCTAGTGTTGGGATGGCAGCAGAACCCAGACAACTGAGCCAACACGTGGAGGGAAGCCCTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660135.1 |
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| CDS TCA 90 bp | ATCTTCAGGTGTGTTTTCCCTCAGCCAGTCCTAGGGTACGGCAGGTaGCACCTCCAACCCTCTCGGAAGCACACCCAAGGCGGAGGGAAT | + |
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Preference number: 5 (lower is better) Translates to: IFRCVFPQPVLGYGR*HLQPSRKHTQGGGN Trigger: ATTCCCTCCGCCTTGGGTGTGCTTCCGAGAGGGTTGGAGGTGTCACCTGCCGTACCCTAGGACTGGCTGAGGGAAAACACACCTGAAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660135.1 |
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| CDS GCA 90 bp | GCCTTTGCACTCCTGCGCTCGGAGGTTCTCCTGAGCTACCTGGGGTaGAGTGGCTATGAAGGCCTCAGTATTCAGACCTCCCTGAACTTG | + |
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Preference number: 5 (lower is better) Translates to: AFALLRSEVLLSYLG*SGYEGLSIQTSLNL Trigger: CAAGTTCAGGGAGGTCTGAATACTGAGGCCTTCATAGCCACTGCACCCCAGGTAGCTCAGGAGAACCTCCGAGCGCAGGAGTGCAAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432701.2 ENST00000607312.1 |
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| CDS TCA 90 bp | CCTGAAGAATGCCAGCCTTTGCACTCCTGCGCTCGGAGGTTCTCCTaGGCTACCTGGGGTGCAGTGGCTATGAAGGCCTCAGTATTCAGA | + |
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Preference number: 5 (lower is better) Translates to: PEECQPLHSCARRFS*ATWGAVAMKASVFR Trigger: TCTGAATACTGAGGCCTTCATAGCCACTGCACCCCAGGTAGCTCAGGAGAACCTCCGAGCGCAGGAGTGCAAAGGCTGGCATTCTTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432701.2 ENST00000607312.1 |
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| CDS GCA 90 bp | CTAGTGAGGGCTTCCCTCCACGTGTTGGCTCAGTTGTCTGGGTTCTaGTGCCATCCCAACACTAGGTCGCCTGTGCACAGAGAAATGCCA | + |
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Preference number: 5 (lower is better) Translates to: LVRASLHVLAQLSGF*CHPNTRSPVHREMP Trigger: TGGCATTTCTCTGTGCACAGGCGACCTAGTGTTGGGATGGCAGCAGAACCCAGACAACTGAGCCAACACGTGGAGGGAAGCCCTCACTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660135.1 |
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| CDS CCA 90 bp | CAGGAGCACAGCAGCACCTTGTTGACCTGCAGCACCCTGCCTGCTTaGCCCGGTCTCTTCACGCTGTCGCTCAGTGCACAATTGAATTTT | + |
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Preference number: 5 (lower is better) Translates to: QEHSSTLLTCSTLPA*PGLFTLSLSAQLNF Trigger: AAAATTCAATTGTGCACTGAGCGACAGCGTGAAGAGACCGGGCCAAGCAGGCAGGGTGCTGCAGGTCAACAAGGTGCTGCTGTGCTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660135.1 |
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| CDS GCA 90 bp | CCCAGGACATCATCACAGGTCAAACACTGTTTCTGGGAAGGCCAGTaGCCCTTGAAGGTGCTCCCTGCTTCGGAAGTGCCTAAACACAGG | + |
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Preference number: 5 (lower is better) Translates to: PRTSSQVKHCFWEGQ*PLKVLPASEVPKHR Trigger: CCTGTGTTTAGGCACTTCCGAAGCAGGGAGCACCTTCAAGGGGCACTGGCCTTCCCAGAAACAGTGTTTGACCTGTGATGATGTCCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432701.2 |
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| CDS CCA 90 bp | CCCTGCATGCTCCCTACTGACCTCTTCCCGCAGCCAGGGAGCATCTaGGGCAAATGCAAACAGTTCTGTGGTCTGCTTATTTGCTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: PCMLPTDLFPQPGSI*GKCKQFCGLLICFS Trigger: AGAAAAGCAAATAAGCAGACCACAGAACTGTTTGCATTTGCCCCAGATGCTCCCTGGCTGCGGGAAGAGGTCAGTAGGGAGCATGCAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607312.1 |
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| CDS TCA 90 bp | ACCTGGGGTGCAGTGGCTATGAAGGCCTCAGTATTCAGACCTCCCTaGACTTGGCTGAAGATCGTGAACAGGAAAGCAAGCTCTATCCCT | + |
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Preference number: 5 (lower is better) Translates to: TWGAVAMKASVFRPP*TWLKIVNRKASSIP Trigger: AGGGATAGAGCTTGCTTTCCTGTTCACGATCTTCAGCCAAGTTCAGGGAGGTCTGAATACTGAGGCCTTCATAGCCACTGCACCCCAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432701.2 ENST00000607312.1 |
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| CDS TCA 90 bp | GTGACACCTCCAACCCTCTCGGAAGCACACCCAAGGCGGAGGGAATaGTGTTGGGAGAATAGTAGAAATTTCTCCGGTTCCAAAATCCGT | + |
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Preference number: 5 (lower is better) Translates to: VTPPTLSEAHPRRRE*CWENSRNFSGSKIR Trigger: ACGGATTTTGGAACCGGAGAAATTTCTACTATTCTCCCAACATCATTCCCTCCGCCTTGGGTGTGCTTCCGAGAGGGTTGGAGGTGTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660135.1 |
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| CDS GCA 90 bp | GCTCAAATTGGAGAACCCTGCTCTCAGTCTGCTGCCAAAGCTGTCTaGTCCAGAGAGTTTTTGGTAGTTAGCCATACCTCTGGACAGTCC | + |
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Preference number: 5 (lower is better) Translates to: AQIGEPCSQSAAKAV*SREFLVVSHTSGQS Trigger: GGACTGTCCAGAGGTATGGCTAACTACCAAAAACTCTCTGGAGCAGACAGCTTTGGCAGCAGACTGAGAGCAGGGTTCTCCAATTTGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660135.1 |
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| CDS CCA 90 bp | TTCTTTGAGAAATCTTCAGGTCCTGAGGCTTCCATCTGCCAGCCATaGGCCATGACTTCCTCTCTAGGGGTCAGCAAACTTTATCCACAG | + |
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Preference number: 5 (lower is better) Translates to: FFEKSSGPEASICQP*AMTSSLGVSKLYPQ Trigger: CTGTGGATAAAGTTTGCTGACCCCTAGAGAGGAAGTCATGGCCCATGGCTGGCAGATGGAAGCCTCAGGACCTGAAGATTTCTCAAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432701.2 |
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| CDS CCA 90 bp | CTTCCCGCAGCCAGGGAGCATCTGGGGCAAATGCAAACAGTTCTGTaGTCTGCTTATTTGCTTTTCTTAGTGCAAAGGTGGAGGCAGAAT | + |
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Preference number: 5 (lower is better) Translates to: LPAAREHLGQMQTVL*SAYLLFLVQRWRQN Trigger: ATTCTGCCTCCACCTTTGCACTAAGAAAAGCAAATAAGCAGACCACAGAACTGTTTGCATTTGCCCCAGATGCTCCCTGGCTGCGGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000607312.1 ENST00000660135.1 |
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| CDS CCA 90 bp | ATAGGTTTTAGAAGCCTTCCAGGTGATTCTTCTGCAAGCTCAAATTaGAGAACCCTGCTCTCAGTCTGCTGCCAAAGCTGTCTGCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: IGFRSLPGDSSASSN*RTLLSVCCQSCLLQ Trigger: CTGGAGCAGACAGCTTTGGCAGCAGACTGAGAGCAGGGTTCTCCAATTTGAGCTTGCAGAAGAATCACCTGGAAGGCTTCTAAAACCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660135.1 |
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| CDS CCA 90 bp | AACATAATATCCCTGCAGTTCTTCCACAATTGGTCCCCAGAGCTTTaGAGGCAAAATGTCATCTGGGTGATGTCCTTTCTCCTACAGCCA | + |
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Preference number: 5 (lower is better) Translates to: NIISLQFFHNWSPEL*RQNVIWVMSFLLQP Trigger: TGGCTGTAGGAGAAAGGACATCACCCAGATGACATTTTGCCTCCAAAGCTCTGGGGACCAATTGTGGAAGAACTGCAGGGATATTATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000432701.2 |
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| CDS CCA 90 bp | ACACAAGAACATTCTAACATAATATCCCTGCAGTTCTTCCACAATTaGTCCCCAGAGCTTTGGAGGCAAAATGTCATCTGGGTGATGTCC | + |
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Preference number: 5 (lower is better) Translates to: TQEHSNIISLQFFHN*SPELWRQNVIWVMS Trigger: GGACATCACCCAGATGACATTTTGCCTCCAAAGCTCTGGGGACCAATTGTGGAAGAACTGCAGGGATATTATGTTAGAATGTTCTTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000432701.2 |
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| CDS GCA 72 bp | GCACAGCAGCACCTTGTTGACCTGCAGCACCCTGCCTaGTTGGCCCGGTCTCTTCACGCTGTCGCTCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: AQQHLVDLQHPA*LARSLHAVAQC Trigger: GCACTGAGCGACAGCGTGAAGAGACCGGGCCAAGCAGGCAGGGTGCTGCAGGTCAACAAGGTGCTGCTGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660135.1 |
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| CDS CCA 72 bp | TGCAGCCACCATGGCTGCCAGGAACAAAGTCAGTTCTaGGGAAGGGGAGCGCCAGAGCCTGCCAGCCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: CSHHGCQEQSQF*GRGAPEPASPA Trigger: TGCTGGGCTGGCAGGCTCTGGCGCTCCCCTTCCCCAGAACTGACTTTGTTCCTGGCAGCCATGGTGGCTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000607312.1 ENST00000660135.1 |
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| CDS TCA 72 bp | GCGGAAAGCCAGGTGGGTTGGAGCCCCACCCTTTCCTaGGCTCTCAGGCTGAGGCTCCTGAAGGCTTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: AESQVGWSPTLS*ALRLRLLKASG Trigger: TCCTGAAGCCTTCAGGAGCCTCAGCCTGAGAGCTCAGGAAAGGGTGGGGCTCCAACCCACCTGGCTTTCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660135.1 |
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| CDS GCA 72 bp | CCTCCACCGGAAGGGACAGCCTCAGAGCCTGAAGAATaGCAGCCTTTGCACTCCTGCGCTCGGAGGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: PPPEGTASEPEE*QPLHSCARRFS Trigger: GGAGAACCTCCGAGCGCAGGAGTGCAAAGGCTGGCATTCTTCAGGCTCTGAGGCTGTCCCTTCCGGTGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000432701.2 ENST00000607312.1 ENST00000660135.1 |
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| CDS CAA 72 bp | CAGCAGCACCTTGTTGACCTGCAGCACCCTGCCTGCTaGGCCCGGTCTCTTCACGCTGTCGCTCAGTGCACA | + |
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Preference number: 6 (lower is better) Translates to: QQHLVDLQHPAC*ARSLHAVAQCT Trigger: TGTGCACTGAGCGACAGCGTGAAGAGACCGGGCCAAGCAGGCAGGGTGCTGCAGGTCAACAAGGTGCTGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660135.1 |
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| CDS TCA 72 bp | TGCCAGCCTTTGCACTCCTGCGCTCGGAGGTTCTCCTaGGCTACCTGGGGTGCAGTGGCTATGAAGGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: CQPLHSCARRFS*ATWGAVAMKAS Trigger: TGAGGCCTTCATAGCCACTGCACCCCAGGTAGCTCAGGAGAACCTCCGAGCGCAGGAGTGCAAAGGCTGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432701.2 ENST00000607312.1 |
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| CDS CCA 72 bp | AGCAGCACCTTGTTGACCTGCAGCACCCTGCCTGCTTaGCCCGGTCTCTTCACGCTGTCGCTCAGTGCACAA | + |
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Preference number: 6 (lower is better) Translates to: SSTLLTCSTLPA*PGLFTLSLSAQ Trigger: TTGTGCACTGAGCGACAGCGTGAAGAGACCGGGCCAAGCAGGCAGGGTGCTGCAGGTCAACAAGGTGCTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660135.1 |
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| CDS CCA 72 bp | GCCTGTGTTTGGAGCTCAGTAAGGCGGAAAGCCAGGTaGGTTGGAGCCCCACCCTTTCCTGAGCTCTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: ACVWSSVRRKAR*VGAPPFPELSG Trigger: GCCTGAGAGCTCAGGAAAGGGTGGGGCTCCAACCCACCTGGCTTTCCGCCTTACTGAGCTCCAAACACAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660135.1 |
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| CDS TCA 72 bp | TGTGTTTTCCCTCAGCCAGTCCTAGGGTACGGCAGGTaGCACCTCCAACCCTCTCGGAAGCACACCCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: CVFPQPVLGYGR*HLQPSRKHTQG Trigger: GCCTTGGGTGTGCTTCCGAGAGGGTTGGAGGTGTCACCTGCCGTACCCTAGGACTGGCTGAGGGAAAACACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660135.1 |
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| CDS GCA 72 bp | CTGGGTTCTGCTGCCATCCCAACACTAGGTCGCCTGTaGACAGAGAAATGCCAGGGGATGACAGCTCCCCCT | + |
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Preference number: 6 (lower is better) Translates to: LGSAAIPTLGRL*TEKCQGMTAPP Trigger: AGGGGGAGCTGTCATCCCCTGGCATTTCTCTGTGCACAGGCGACCTAGTGTTGGGATGGCAGCAGAACCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660135.1 |
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| CDS GCA 72 bp | GCTTCCCTCCACGTGTTGGCTCAGTTGTCTGGGTTCTaGTGCCATCCCAACACTAGGTCGCCTGTGCACAGA | + |
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Preference number: 6 (lower is better) Translates to: ASLHVLAQLSGF*CHPNTRSPVHR Trigger: TCTGTGCACAGGCGACCTAGTGTTGGGATGGCAGCAGAACCCAGACAACTGAGCCAACACGTGGAGGGAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660135.1 |
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| CDS CAA 90 bp | TCAGGAGCACAGCAGCACCTTGTTGACCTGCAGCACCCTGCCTGCTaGGCCCGGTCTCTTCACGCTGTCGCTCAGTGCACAATTGAATTT | + |
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Preference number: 6 (lower is better) Translates to: SGAQQHLVDLQHPAC*ARSLHAVAQCTIEF Trigger: AAATTCAATTGTGCACTGAGCGACAGCGTGAAGAGACCGGGCCAAGCAGGCAGGGTGCTGCAGGTCAACAAGGTGCTGCTGTGCTCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660135.1 |
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| CDS CCA 72 bp | AAAGGTGGAGGCAGAATGTGGTTAGTGCAGCCACCATaGCTGCCAGGAACAAAGTCAGTTCTGGGGAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: KGGGRMWLVQPP*LPGTKSVLGKG Trigger: CCCCTTCCCCAGAACTGACTTTGTTCCTGGCAGCCATGGTGGCTGCACTAACCACATTCTGCCTCCACCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000607312.1 ENST00000660135.1 |
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| CDS CAA 90 bp | CCCTGCTCTCAGTCTGCTGCCAAAGCTGTCTGCTCCAGAGAGTTTTaGGTAGTTAGCCATACCTCTGGACAGTCCTCTTCCCCTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: PCSQSAAKAVCSREF*VVSHTSGQSSSPSS Trigger: GGAGGAAGGGGAAGAGGACTGTCCAGAGGTATGGCTAACTACCAAAAACTCTCTGGAGCAGACAGCTTTGGCAGCAGACTGAGAGCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660135.1 |
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| CDS CCA 72 bp | CTCCCTACTGACCTCTTCCCGCAGCCAGGGAGCATCTaGGGCAAATGCAAACAGTTCTGTGGTCTGCTTATT | + |
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Preference number: 6 (lower is better) Translates to: LPTDLFPQPGSI*GKCKQFCGLLI Trigger: AATAAGCAGACCACAGAACTGTTTGCATTTGCCCCAGATGCTCCCTGGCTGCGGGAAGAGGTCAGTAGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607312.1 |
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| CDS TCA 72 bp | CCAACCCTCTCGGAAGCACACCCAAGGCGGAGGGAATaGTGTTGGGAGAATAGTAGAAATTTCTCCGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: PTLSEAHPRRRE*CWENSRNFSGS Trigger: GGAACCGGAGAAATTTCTACTATTCTCCCAACATCATTCCCTCCGCCTTGGGTGTGCTTCCGAGAGGGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660135.1 |
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| CDS CCA 72 bp | AAATCTTCAGGTCCTGAGGCTTCCATCTGCCAGCCATaGGCCATGACTTCCTCTCTAGGGGTCAGCAAACTT | + |
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Preference number: 6 (lower is better) Translates to: KSSGPEASICQP*AMTSSLGVSKL Trigger: AAGTTTGCTGACCCCTAGAGAGGAAGTCATGGCCCATGGCTGGCAGATGGAAGCCTCAGGACCTGAAGATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432701.2 |
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| CDS GCA 72 bp | GGGGGTTCAGCGGTGATGATACACTATGTTTGGTTTTaGTCCAGTCCTTGTGTGTGTCTGTGGCCACAGACT | + |
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Preference number: 6 (lower is better) Translates to: GGSAVMIHYVWF*SSPCVCLWPQT Trigger: AGTCTGTGGCCACAGACACACACAAGGACTGGAGCAAAACCAAACATAGTGTATCATCACCGCTGAACCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000432701.2 |
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| CDS CCA 72 bp | TGTTTGCTGTGTCTCTTCCCGCAGCCAGGGAGCATCTaGGGCAAATGCAAACAGTTCTGTGGTCTGCTTATT | + |
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Preference number: 6 (lower is better) Translates to: CLLCLFPQPGSI*GKCKQFCGLLI Trigger: AATAAGCAGACCACAGAACTGTTTGCATTTGCCCCAGATGCTCCCTGGCTGCGGGAAGAGACACAGCAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660135.1 |
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| CDS CAA 72 bp | TGGGGGTTCAGCGGTGATGATACACTATGTTTGGTTTaGCTCCAGTCCTTGTGTGTGTCTGTGGCCACAGAC | + |
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Preference number: 6 (lower is better) Translates to: WGFSGDDTLCLV*LQSLCVSVATD Trigger: GTCTGTGGCCACAGACACACACAAGGACTGGAGCAAAACCAAACATAGTGTATCATCACCGCTGAACCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000432701.2 |
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| CDS CAA 72 bp | CAGTCTGCTGCCAAAGCTGTCTGCTCCAGAGAGTTTTaGGTAGTTAGCCATACCTCTGGACAGTCCTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: QSAAKAVCSREF*VVSHTSGQSSS Trigger: GGAAGAGGACTGTCCAGAGGTATGGCTAACTACCAAAAACTCTCTGGAGCAGACAGCTTTGGCAGCAGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660135.1 |
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| CDS CAA 90 bp | GGCCATGACTTCCTCTCTAGGGGTCAGCAAACTTTATCCACAGTCTaGTCCACATCAATAAGAAGCAGTTCACCTCCACCGGAAGGGACA | + |
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Preference number: 6 (lower is better) Translates to: GHDFLSRGQQTLSTV*STSIRSSSPPPEGT Trigger: TGTCCCTTCCGGTGGAGGTGAACTGCTTCTTATTGATGTGGACAAGACTGTGGATAAAGTTTGCTGACCCCTAGAGAGGAAGTCATGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432701.2 |
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| CDS GCA 72 bp | TCTGCAAGCTCAAATTGGAGAACCCTGCTCTCAGTCTaGTGCCAAAGCTGTCTGCTCCAGAGAGTTTTTGGT | + |
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Preference number: 6 (lower is better) Translates to: SASSNWRTLLSV*CQSCLLQRVFG Trigger: ACCAAAAACTCTCTGGAGCAGACAGCTTTGGCAGCAGACTGAGAGCAGGGTTCTCCAATTTGAGCTTGCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660135.1 |
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| CDS CCA 72 bp | AATTGGTCCCCAGAGCTTTGGAGGCAAAATGTCATCTaGGTGATGTCCTTTCTCCTACAGCCATCATCAGGC | + |
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Preference number: 6 (lower is better) Translates to: NWSPELWRQNVI*VMSFLLQPSSG Trigger: GCCTGATGATGGCTGTAGGAGAAAGGACATCACCCAGATGACATTTTGCCTCCAAAGCTCTGGGGACCAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000432701.2 |
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| CDS CAA 72 bp | AAAAGGTACATTTCTGGTGACAAGGCACAAATAGGCTaGTCAGGGAGCGAGACGCACATGCAGGATAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: KRYISGDKAQIG*SGSETHMQDKG Trigger: GCCCTTATCCTGCATGTGCGTCTCGCTCCCTGACAAGCCTATTTGTGCCTTGTCACCAGAAATGTACCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660135.1 |
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| CDS CCA 72 bp | GCCAGGGAGCATCTGGGGCAAATGCAAACAGTTCTGTaGTCTGCTTATTTGCTTTTCTTAGTGCAAAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: AREHLGQMQTVL*SAYLLFLVQRW Trigger: CCACCTTTGCACTAAGAAAAGCAAATAAGCAGACCACAGAACTGTTTGCATTTGCCCCAGATGCTCCCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000607312.1 ENST00000660135.1 |
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| CDS CAA 90 bp | AGCTGTGAACATATATTAATTGCTGTCAGCAGCAGGTCCCTTTCTTaGAGAAATCTTCAGGTCCTGAGGCTTCCATCTGCCAGCCATGGG | + |
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Preference number: 6 (lower is better) Translates to: SCEHILIAVSSRSLS*RNLQVLRLPSASHG Trigger: CCCATGGCTGGCAGATGGAAGCCTCAGGACCTGAAGATTTCTCAAAGAAAGGGACCTGCTGCTGACAGCAATTAATATATGTTCACAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432701.2 |
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| CDS CAA 72 bp | CTGTGCTGCAGGAACAACAACAAAAGCTCAGTGGCTTaGCACGTAAACGTTCACTTCTCTCTCACACAAGTC | + |
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Preference number: 6 (lower is better) Translates to: LCCRNNNKSSVA*HVNVHFSLTQV Trigger: GACTTGTGTGAGAGAGAAGTGAACGTTTACGTGCAAAGCCACTGAGCTTTTGTTGTTGTTCCTGCAGCACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660135.1 |
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| CDS CAA 72 bp | CTGGGGCAAATGCAAACAGTTCTGTGGTCTGCTTATTaGCTTTTCTTAGTGCAAAGGTGGAGGCAGAATGTG | + |
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Preference number: 6 (lower is better) Translates to: LGQMQTVLWSAY*LFLVQRWRQNV Trigger: CACATTCTGCCTCCACCTTTGCACTAAGAAAAGCAAATAAGCAGACCACAGAACTGTTTGCATTTGCCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000607312.1 ENST00000660135.1 |
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| CDS CCA 72 bp | CATTCTAACATAATATCCCTGCAGTTCTTCCACAATTaGTCCCCAGAGCTTTGGAGGCAAAATGTCATCTGG | + |
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Preference number: 6 (lower is better) Translates to: HSNIISLQFFHN*SPELWRQNVIW Trigger: CCAGATGACATTTTGCCTCCAAAGCTCTGGGGACCAATTGTGGAAGAACTGCAGGGATATTATGTTAGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000432701.2 |
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| CDS CAA 72 bp | AGAATAGTAGAAATTTCTCCGGTTCCAAAATCCGTATaGCTTCCTTATGGGAAAGGGCTTATTTTTCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: RIVEISPVPKSV*LPYGKGLIFPC Trigger: ACAAGGAAAAATAAGCCCTTTCCCATAAGGAAGCAATACGGATTTTGGAACCGGAGAAATTTCTACTATTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660135.1 |
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