RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TUSC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000104723

Ensembl transcript IDs: ENST00000382020.8, ENST00000503191.5, ENST00000503731.6, ENST00000506802.5, ENST00000507400.1, ENST00000508446.1, ENST00000509177.1, ENST00000509380.5, ENST00000510836.5, ENST00000511783.2, ENST00000515859.5

Found 305 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AACAAACAGAAGTTAAGAAAGTATATTTGTTGGGGGTGGAAGCATTaGATCTGTCAAATGATTAACTCCACGTGTCAGTCTTTTGGTAGA +
Preference number: 1 (lower is better)
Translates to: NKQKLRKYICWGWKH*ICQMINSTCQSFGR
Trigger: TCTACCAAAAGACTGACACGTGGAGTTAATCATTTGACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTTCTGTTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511783.2
3UTR CCA 90 bp CTAAGTGATAACAAACAGAAGTTAAGAAAGTATATTTGTTGGGGGTaGAAGCATTGCATCTGTCAAATGATTAACTCCACGTGTCAGTCT +
Preference number: 1 (lower is better)
Translates to: LSDNKQKLRKYICWG*KHCICQMINSTCQS
Trigger: AGACTGACACGTGGAGTTAATCATTTGACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTTCTGTTTGTTATCACTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511783.2
3UTR TCA 90 bp TGTACACCCGTTTCTTGTTTGAGGCTATATAGCTGGAACTCCCAATaGAAACAATTCTCCATGGTCTGTTACTCAAATCTTAATGAAAAT +
Preference number: 1 (lower is better)
Translates to: CTPVSCLRLYSWNSQ*KQFSMVCYSNLNEN
Trigger: ATTTTCATTAAGATTTGAGTAACAGACCATGGAGAATTGTTTTCATTGGGAGTTCCAGCTATATAGCCTCAAACAAGAAACGGGTGTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
3UTR-3UTR TCA 90 bp CTCAATGGTTGTACACCCGTTTCTTGTTTGAGGCTATATAGCTGGAACTCCCAACACCCGTTTCTTGTTTaGGGCTATATAGCTGGAACT +
Preference number: 2 (lower is better)
Translates to: LNGCTPVSCLRLYSWNSQHPFLV*GYIAGT
Trigger: AGTTCCAGCTATATAGCCTCAAACAAGAAACGGGTG...TTGGGAGTTCCAGCTATATAGCCTCAAACAAGAAACGGGTGTACAACCATTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
3UTR-3UTR TCA 90 bp TCGCATGTATGTGATTTTGCACGTTACATTCTGCAAGCAAACTATATGTTTGAGAGCTGGAACTCCCAATaGAAACAATTCTCCATGGTC +
Preference number: 2 (lower is better)
Translates to: SHVCDFARYILQANYMFESWNSQ*KQFSMV
Trigger: GACCATGGAGAATTGTTTTCATTGGGAGTTCCAGCT...CTCAAACATATAGTTTGCTTGCAGAATGTAACGTGCAAAATCACATACATGCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
3UTR-3UTR TCA 90 bp AAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAAATGATTAACTCCACGGTAGACATTTTTATCTaGGGACTTTTGCCTGAGGTT +
Preference number: 2 (lower is better)
Translates to: KYICWGWKHCICQMINSTVDIFI*GLLPEV
Trigger: AACCTCAGGCAAAAGTCCTCAGATAAAAATGTCTAC...CGTGGAGTTAATCATTTGACAGATGCAATGCTTCCACCCCCAACAAATATACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000511783.2
3UTR-3UTR TCA 90 bp ATTCTGCAAGCAAACTATATGTTTGAGCCACTCTTTGCAATTCTGCCTATAGCACAAAGATTGAGGATTTaGTGGAAAGCTGGTTGCATA +
Preference number: 2 (lower is better)
Translates to: ILQANYMFEPLFAILPIAQRLRI*WKAGCI
Trigger: TATGCAACCAGCTTTCCATCAAATCCTCAATCTTTG...TGCTATAGGCAGAATTGCAAAGAGTGGCTCAAACATATAGTTTGCTTGCAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
3UTR-3UTR GCA 90 bp TTTGCACGTTACATTCTGCAAGCAAACTATATGTTTGAGCCACTCTTTGCAATTCTAGTTGTGGTATGTTaGTTTCATCGTCTGATGCCT +
Preference number: 2 (lower is better)
Translates to: FARYILQANYMFEPLFAILVVVC*FHRLMP
Trigger: AGGCATCAGACGATGAAAGCAACATACCACAACTAG...AATTGCAAAGAGTGGCTCAAACATATAGTTTGCTTGCAGAATGTAACGTGCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
3UTR-3UTR GCA 90 bp TTTGCACGTTACATTCTGCAAGCAAACTATATGTTTGAGCCACTCTTTGCAATTTTACAGGTCAAGTTCTaGCTAGTGATAGGCAGTGAT +
Preference number: 2 (lower is better)
Translates to: FARYILQANYMFEPLFAILQVKF*LVIGSD
Trigger: ATCACTGCCTATCACTAGGCAGAACTTGACCTGTAA...AATTGCAAAGAGTGGCTCAAACATATAGTTTGCTTGCAGAATGTAACGTGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
3UTR-3UTR TCA 90 bp ATTCTGCAAGCAAACTATATGTTTGAGCCACTCTTTGCAATTCTGCCTATAGCAAGTAACGACTTATGTTaGGGCAGTATATTTTGCTCT +
Preference number: 2 (lower is better)
Translates to: ILQANYMFEPLFAILPIASNDLC*GSIFCS
Trigger: AGAGCAAAATATACTGCCTCAACATAAGTCGTTACT...TGCTATAGGCAGAATTGCAAAGAGTGGCTCAAACATATAGTTTGCTTGCAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
3UTR-3UTR TCA 90 bp AAACAGAAGTTAAGAAAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAACTGAGGACTTTTGCCTaGGGTTATAGAGTTTTTAAG +
Preference number: 2 (lower is better)
Translates to: KQKLRKYICWGWKHCICQLRTFA*GYRVFK
Trigger: CTTAAAAACTCTATAACCTCAGGCAAAAGTCCTCAG...TTGACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTTCTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000511783.2
3UTR-3UTR GCA 90 bp ATTCTGCAAGCAAACTATATGTTTGAGCCACTCTTTGCAATTCTGCCTATAGCAGCCTTTGAAGCACACTaGTTTAATGCACATTTACTT +
Preference number: 2 (lower is better)
Translates to: ILQANYMFEPLFAILPIAAFEAH*FNAHLL
Trigger: AAGTAAATGTGCATTAAAGCAGTGTGCTTCAAAGGC...TGCTATAGGCAGAATTGCAAAGAGTGGCTCAAACATATAGTTTGCTTGCAGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
3UTR-3UTR GCA 90 bp TCGCATGTATGTGATTTTGCACGTTACATTCTGCAAGCAAACTATATGTTTGAGTATAGAGTTTTTAAGTaGCATGGTCCAAATCACATC +
Preference number: 2 (lower is better)
Translates to: SHVCDFARYILQANYMFEYRVFK*HGPNHI
Trigger: GATGTGATTTGGACCATGGCACTTAAAAACTCTATA...CTCAAACATATAGTTTGCTTGCAGAATGTAACGTGCAAAATCACATACATGCGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503731.6
3UTR-3UTR GCA 90 bp ACAGAAGTTAAGAAAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAAATTATAGAGTTTTTAAGTaGCATGGTCCAAATCACATC +
Preference number: 2 (lower is better)
Translates to: TEVKKVYLLGVEALHLSNYRVFK*HGPNHI
Trigger: GATGTGATTTGGACCATGGCACTTAAAAACTCTATA...ATTTGACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTTCTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000511783.2
3UTR-3UTR CAA 90 bp CTCAATGGTTGTACACCCGTTTCTTGTTTGAGGCTATATAGCTGGAACTCCCAACCTAGTTGTGGTATGTaGCTTTCATCGTCTGATGCC +
Preference number: 3 (lower is better)
Translates to: LNGCTPVSCLRLYSWNSQPSCGM*LSSSDA
Trigger: GGCATCAGACGATGAAAGCAACATACCACAACTAGG...TTGGGAGTTCCAGCTATATAGCCTCAAACAAGAAACGGGTGTACAACCATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
3UTR-3UTR CAA 90 bp TTTGCACGTTACATTCTGCAAGCAAACTATATGTTTGAGCCACTCTTTGCAATTCATCGTCTGATGCCTTaGAAGCACACTGCTTTAATG +
Preference number: 3 (lower is better)
Translates to: FARYILQANYMFEPLFAIHRLMP*KHTALM
Trigger: CATTAAAGCAGTGTGCTTCAAAGGCATCAGACGATG...AATTGCAAAGAGTGGCTCAAACATATAGTTTGCTTGCAGAATGTAACGTGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
3UTR TCA 72 bp ATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAAATaGTTAACTCCACGTGTCAGTCTTTTGGTAGACATT +
Preference number: 3 (lower is better)
Translates to: IFVGGGSIASVK*LTPRVSLLVDI
Trigger: AATGTCTACCAAAAGACTGACACGTGGAGTTAATCATTTGACAGATGCAATGCTTCCACCCCCAACAAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511783.2
3UTR GCA 72 bp AAGTTAAGAAAGTATATTTGTTGGGGGTGGAAGCATTaGATCTGTCAAATGATTAACTCCACGTGTCAGTCT +
Preference number: 3 (lower is better)
Translates to: KLRKYICWGWKH*ICQMINSTCQS
Trigger: AGACTGACACGTGGAGTTAATCATTTGACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511783.2
3UTR-3UTR CAA 90 bp TCGCATGTATGTGATTTTGCACGTTACATTCTGCAAGCAAACTATATGTTTGAGTTGATGGAAAGCTGGTaGCATAAAACACATGAGCAA +
Preference number: 3 (lower is better)
Translates to: SHVCDFARYILQANYMFELMESW*HKTHEQ
Trigger: TTGCTCATGTGTTTTATGCAACCAGCTTTCCATCAA...CTCAAACATATAGTTTGCTTGCAGAATGTAACGTGCAAAATCACATACATGCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
3UTR TCA 72 bp GTTTCTTGTTTGAGGCTATATAGCTGGAACTCCCAATaGAAACAATTCTCCATGGTCTGTTACTCAAATCTT +
Preference number: 3 (lower is better)
Translates to: VSCLRLYSWNSQ*KQFSMVCYSNL
Trigger: AAGATTTGAGTAACAGACCATGGAGAATTGTTTTCATTGGGAGTTCCAGCTATATAGCCTCAAACAAGAAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
3UTR CCA 72 bp TACCTGGATTCAAAGATTGAGGATTTGATGGAAAGCTaGTTGCATAAAACACATGAGCAAAATGGATATAGT +
Preference number: 3 (lower is better)
Translates to: YLDSKIEDLMES*LHKTHEQNGYS
Trigger: ACTATATCCATTTTGCTCATGTGTTTTATGCAACCAGCTTTCCATCAAATCCTCAATCTTTGAATCCAGGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
3UTR TCA 72 bp TCATTGTCTAGCAAAGGTAAATACATCGCATGTATGTaGTTTTGCACGTTACATTCTGCAAGCAAACTATAT +
Preference number: 3 (lower is better)
Translates to: SLSSKGKYIACM*FCTLHSASKLY
Trigger: ATATAGTTTGCTTGCAGAATGTAACGTGCAAAATCACATACATGCGATGTATTTACCTTTGCTAGACAATGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR GCA 90 bp AGAAGGAGCTCTAGTCCTTGGTTAGGCATCCAAATTGTAGGTACCATTCATCCAGGATGGCAGCGGCTTTaGGAGGGACCCGGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: RRSSSPWLGIQIVGTIHPGWQRL*EGPGPR
Trigger: CCGCGGCCCGGGTCCCTCGCAAAGCCGCTGCCATCC...TGGATGAATGGTACCTACAATTTGGATGCCTAACCAAGGACTAGAGCTCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR GCA 90 bp AGAAGGAGCTCTAGTCCTTGGTTAGGCATCCAAATTGTAGGTACCATTCATCCAAGCCGCCGCCCCGCTTaGCTACGGCGTGAAGGAGCG +
Preference number: 4 (lower is better)
Translates to: RRSSSPWLGIQIVGTIHPSRRPA*LRREGA
Trigger: CGCTCCTTCACGCCGTAGGCAAGCGGGGCGGCGGCT...TGGATGAATGGTACCTACAATTTGGATGCCTAACCAAGGACTAGAGCTCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR TCA 90 bp ATTCTGCAAGCAAACTATATGTTTGAGCCACTCTTTGCAATTCTGCCTATAGCACGCTTGCCTACGGCGTaGAGGAGCGCCCCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: ILQANYMFEPLFAILPIARLPTA*RSAPGP
Trigger: GGGGCCCGGGGCGCTCCTTCACGCCGTAGGCAAGCG...TGCTATAGGCAGAATTGCAAAGAGTGGCTCAAACATATAGTTTGCTTGCAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR GCA 90 bp TCATCCTTCAGCTCGGTATTCCTGATGTGTTTCGATAGTCATCACTTTATCCAGAGCCGCCGCCCCGCTTaGCTACGGCGTGAAGGAGCG +
Preference number: 4 (lower is better)
Translates to: SSFSSVFLMCFDSHHFIQSRRPA*LRREGA
Trigger: CGCTCCTTCACGCCGTAGGCAAGCGGGGCGGCGGCT...CTGGATAAAGTGATGACTATCGAAACACATCAGGAATACCGAGCTGAAGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR GCA 90 bp ACTAGGCAAATTATCCGTCTTTTTCCAACATCGCCTTTCGAAGTTGCTGCTTCAAGCCGCCGCCCCGCTTaGCTACGGCGTGAAGGAGCG +
Preference number: 4 (lower is better)
Translates to: TRQIIRLFPTSPFEVAASSRRPA*LRREGA
Trigger: CGCTCCTTCACGCCGTAGGCAAGCGGGGCGGCGGCT...TGAAGCAGCAACTTCGAAAGGCGATGTTGGAAAAAGACGGATAATTTGCCTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515859.5
CDS-3UTR CCA 90 bp ACTAGGCAAATTATCCGTCTTTTTCCAACATCGCCTTTCGAAGTTGCTGCTTCACTGGGCCCTCCGGGATaGCAGCGGCTTTGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: TRQIIRLFPTSPFEVAASLGPPG*QRLCEG
Trigger: TCCCTCGCAAAGCCGCTGCCATCCCGGAGGGCCCAG...TGAAGCAGCAACTTCGAAAGGCGATGTTGGAAAAAGACGGATAATTTGCCTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515859.5
CDS-3UTR TCA 90 bp ACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAACGCTTGCCTACGGCGTaGAGGAGCGCCCCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: TLSFISILWHTLNITGLKRLPTA*RSAPGP
Trigger: GGGGCCCGGGGCGCTCCTTCACGCCGTAGGCAAGCG...TTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR TCA 90 bp ATTACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGCGCTTGCCTACGGCGTaGAGGAGCGCCCCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: ITLSFISILWHTLNITGLRLPTA*RSAPGP
Trigger: GGGGCCCGGGGCGCTCCTTCACGCCGTAGGCAAGCG...CAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR TCA 90 bp AAATTAAACCTTGGAGAATTCCTGCCATACAATAAAAGGATGATCTCAACACAGCGCTTGCCTACGGCGTaGAGGAGCGCCCCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: KLNLGEFLPYNKRMISTQRLPTA*RSAPGP
Trigger: GGGGCCCGGGGCGCTCCTTCACGCCGTAGGCAAGCG...CTGTGTTGAGATCATCCTTTTATTGTATGGCAGGAATTCTCCAAGGTTTAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR TCA 90 bp TCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTCGCTTGCCTACGGCGTaGAGGAGCGCCCCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: SFISILWHTLNITGLKNTRLPTA*RSAPGP
Trigger: GGGGCCCGGGGCGCTCCTTCACGCCGTAGGCAAGCG...AGTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR GCA 90 bp GTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACGGATGGCAGCGGCTTTaGGAGGGACCCGGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: VIYFNPVAHTEYNRLEKHGWQRL*EGPGPR
Trigger: CCGCGGCCCGGGTCCCTCGCAAAGCCGCTGCCATCC...GTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR GCA 90 bp TACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAGGATGGCAGCGGCTTTaGGAGGGACCCGGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: YIVIYFNPVAHTEYNRLEGWQRL*EGPGPR
Trigger: CCGCGGCCCGGGTCCCTCGCAAAGCCGCTGCCATCC...TTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR GCA 90 bp AAATTAAACCTTGGAGAATTCCTGCCATACAATAAAAGGATGATCTCAACACAGGGATGGCAGCGGCTTTaGGAGGGACCCGGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: KLNLGEFLPYNKRMISTQGWQRL*EGPGPR
Trigger: CCGCGGCCCGGGTCCCTCGCAAAGCCGCTGCCATCC...CTGTGTTGAGATCATCCTTTTATTGTATGGCAGGAATTCTCCAAGGTTTAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR GCA 90 bp ACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAGGATGGCAGCGGCTTTaGGAGGGACCCGGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: TLSFISILWHTLNITGLKGWQRL*EGPGPR
Trigger: CCGCGGCCCGGGTCCCTCGCAAAGCCGCTGCCATCC...TTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR GCA 90 bp TCGCATGTATGTGATTTTGCACGTTACATTCTGCAAGCAAACTATATGTTTGAGAGCCGCCGCCCCGCTTaGCTACGGCGTGAAGGAGCG +
Preference number: 4 (lower is better)
Translates to: SHVCDFARYILQANYMFESRRPA*LRREGA
Trigger: CGCTCCTTCACGCCGTAGGCAAGCGGGGCGGCGGCT...CTCAAACATATAGTTTGCTTGCAGAATGTAACGTGCAAAATCACATACATGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR GCA 90 bp ACTAGGCAAATTATCCGTCTTTTTCCAACATCGCCTTTCGAAGTTGCTGCTTCACTCCCCCGAGCTGGATaGAGAGCAGCAGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: TRQIIRLFPTSPFEVAASLPRAG*RAAAAG
Trigger: TCCTGCTGCTGCTGCTCTGCATCCAGCTCGGGGGAG...TGAAGCAGCAACTTCGAAAGGCGATGTTGGAAAAAGACGGATAATTTGCCTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515859.5
CDS-3UTR CCA 90 bp ATTCTGCAAGCAAACTATATGTTTGAGCCACTCTTTGCAATTCTGCCTATAGCAAGGGAAAGCTCCCGGTaGGCAGGTACCGCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: ILQANYMFEPLFAILPIARESSR*AGTAAA
Trigger: GGCGGCTGCGGTACCTGCCCACCGGGAGCTTTCCCT...TGCTATAGGCAGAATTGCAAAGAGTGGCTCAAACATATAGTTTGCTTGCAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR GCA 90 bp TACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAGCCGCCGCCCCGCTTaGCTACGGCGTGAAGGAGCG +
Preference number: 4 (lower is better)
Translates to: YIVIYFNPVAHTEYNRLESRRPA*LRREGA
Trigger: CGCTCCTTCACGCCGTAGGCAAGCGGGGCGGCGGCT...TTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp GTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACCTGGGCCCTCCGGGATaGCAGCGGCTTTGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: VIYFNPVAHTEYNRLEKHLGPPG*QRLCEG
Trigger: TCCCTCGCAAAGCCGCTGCCATCCCGGAGGGCCCAG...GTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp GTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACAGGGAAAGCTCCCGGTaGGCAGGTACCGCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: VIYFNPVAHTEYNRLEKHRESSR*AGTAAA
Trigger: GGCGGCTGCGGTACCTGCCCACCGGGAGCTTTCCCT...GTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR TCA 90 bp AGACCACCAGGCCCAATCCCACTAGGCAAATTATCCGTCTTTTTCCAACATCGCGAGCAGAGTTCATGTTaGGCTGCTGAAAAACGTCTG +
Preference number: 4 (lower is better)
Translates to: RPPGPIPLGKLSVFFQHREQSSC*AAEKRL
Trigger: CAGACGTTTTTCAGCAGCTCAACATGAACTCTGCTC...GCGATGTTGGAAAAAGACGGATAATTTGCCTAGTGGGATTGGGCCTGGTGGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515859.5
CDS-3UTR GCA 90 bp TTCAGCTCGGTATTCCTGATGTGTTTCGATAGTCATCACTTTATCCAGATAAAGCTCCCCCGAGCTGGATaGAGAGCAGCAGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: FSSVFLMCFDSHHFIQIKLPRAG*RAAAAG
Trigger: TCCTGCTGCTGCTGCTCTGCATCCAGCTCGGGGGAG...CTTTATCTGGATAAAGTGATGACTATCGAAACACATCAGGAATACCGAGCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR CCA 90 bp TCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTCTGGGCCCTCCGGGATaGCAGCGGCTTTGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: SFISILWHTLNITGLKNTLGPPG*QRLCEG
Trigger: TCCCTCGCAAAGCCGCTGCCATCCCGGAGGGCCCAG...AGTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp ATTACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGCTGGGCCCTCCGGGATaGCAGCGGCTTTGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: ITLSFISILWHTLNITGLLGPPG*QRLCEG
Trigger: TCCCTCGCAAAGCCGCTGCCATCCCGGAGGGCCCAG...CAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp AAATTAAACCTTGGAGAATTCCTGCCATACAATAAAAGGATGATCTCAACACAGCTGGGCCCTCCGGGATaGCAGCGGCTTTGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: KLNLGEFLPYNKRMISTQLGPPG*QRLCEG
Trigger: TCCCTCGCAAAGCCGCTGCCATCCCGGAGGGCCCAG...CTGTGTTGAGATCATCCTTTTATTGTATGGCAGGAATTCTCCAAGGTTTAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR CCA 90 bp ACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAGGGAAAGCTCCCGGTaGGCAGGTACCGCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: TLSFISILWHTLNITGLKRESSR*AGTAAA
Trigger: GGCGGCTGCGGTACCTGCCCACCGGGAGCTTTCCCT...TTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp TTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTTTGAGGGAAAGCTCCCGGTaGGCAGGTACCGCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: FISILWHTLNITGLKNTLRESSR*AGTAAA
Trigger: GGCGGCTGCGGTACCTGCCCACCGGGAGCTTTCCCT...CAAAGTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp CTAAATCTCAGCTTGATGTCAATGATCCATGAAATTAAACCTTGGAGAATTCCTAGGGAAAGCTCCCGGTaGGCAGGTACCGCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: LNLSLMSMIHEIKPWRIPRESSR*AGTAAA
Trigger: GGCGGCTGCGGTACCTGCCCACCGGGAGCTTTCCCT...AGGAATTCTCCAAGGTTTAATTTCATGGATCATTGACATCAAGCTGAGATTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR CCA 90 bp ATTACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAGGGAAAGCTCCCGGTaGGCAGGTACCGCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: ITLSFISILWHTLNITGLRESSR*AGTAAA
Trigger: GGCGGCTGCGGTACCTGCCCACCGGGAGCTTTCCCT...CAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR TCA 90 bp AGAAGAAGACCACCAGGCCCAATCCCACTAGGCAAATTATCCGTCTTTTTCCAATTGTGTGGGTTCTTATaGGCATATGGAGGTCCACGG +
Preference number: 4 (lower is better)
Translates to: RRRPPGPIPLGKLSVFFQLCGFL*AYGGPR
Trigger: CCGTGGACCTCCATATGCTCATAAGAACCCACACAA...TTGGAAAAAGACGGATAATTTGCCTAGTGGGATTGGGCCTGGTGGTCTTCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515859.5
CDS-3UTR CCA 90 bp AGAAGGAGCTCTAGTCCTTGGTTAGGCATCCAAATTGTAGGTACCATTCATCCAGGAGGTCCACGGATATaGTTCCACATCTGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: RRSSSPWLGIQIVGTIHPGGPRI*FHIWPE
Trigger: TTCTGGCCAGATGTGGAACCATATCCGTGGACCTCC...TGGATGAATGGTACCTACAATTTGGATGCCTAACCAAGGACTAGAGCTCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR TCA 90 bp AGAAGGAGCTCTAGTCCTTGGTTAGGCATCCAAATTGTAGGTACCATTCATCCATTGTGTGGGTTCTTATaGGCATATGGAGGTCCACGG +
Preference number: 4 (lower is better)
Translates to: RRSSSPWLGIQIVGTIHPLCGFL*AYGGPR
Trigger: CCGTGGACCTCCATATGCTCATAAGAACCCACACAA...TGGATGAATGGTACCTACAATTTGGATGCCTAACCAAGGACTAGAGCTCCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR GCA 90 bp TACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAACTCCCCCGAGCTGGATaGAGAGCAGCAGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: YIVIYFNPVAHTEYNRLELPRAG*RAAAAG
Trigger: TCCTGCTGCTGCTGCTCTGCATCCAGCTCGGGGGAG...TTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR GCA 90 bp ATTACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGCTCCCCCGAGCTGGATaGAGAGCAGCAGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ITLSFISILWHTLNITGLLPRAG*RAAAAG
Trigger: TCCTGCTGCTGCTGCTCTGCATCCAGCTCGGGGGAG...CAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR GCA 90 bp ACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAACTCCCCCGAGCTGGATaGAGAGCAGCAGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: TLSFISILWHTLNITGLKLPRAG*RAAAAG
Trigger: TCCTGCTGCTGCTGCTCTGCATCCAGCTCGGGGGAG...TTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp GTAGGTACCATTCATCCAGTTCCCTGTCCTATATACCTTTATCTAGTTATAATTTGTCCTCCCCCGAGCTaGATGCAGAGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VGTIHPVPCPIYLYLVIICPPPS*MQSSSS
Trigger: GCTGCTGCTGCTCTGCATCCAGCTCGGGGGAGGACA...AATTATAACTAGATAAAGGTATATAGGACAGGGAACTGGATGAATGGTACCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CCA 90 bp TCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTTGTCCTCCCCCGAGCTaGATGCAGAGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SFISILWHTLNITGLKNTCPPPS*MQSSSS
Trigger: GCTGCTGCTGCTCTGCATCCAGCTCGGGGGAGGACA...AGTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp ATTACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGTGTCCTCCCCCGAGCTaGATGCAGAGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ITLSFISILWHTLNITGLCPPPS*MQSSSS
Trigger: GCTGCTGCTGCTCTGCATCCAGCTCGGGGGAGGACA...CAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp TCGGTATTCCTGATGTGTTTCGATAGTCATCACTTTATCCAGATAAAGTATACTTGTCCTCCCCCGAGCTaGATGCAGAGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SVFLMCFDSHHFIQIKYTCPPPS*MQSSSS
Trigger: GCTGCTGCTGCTCTGCATCCAGCTCGGGGGAGGACA...AGTATACTTTATCTGGATAAAGTGATGACTATCGAAACACATCAGGAATACCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR CCA 90 bp ACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAATGTCCTCCCCCGAGCTaGATGCAGAGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TLSFISILWHTLNITGLKCPPPS*MQSSSS
Trigger: GCTGCTGCTGCTCTGCATCCAGCTCGGGGGAGGACA...TTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp TACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAATGTCCTCCCCCGAGCTaGATGCAGAGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: YIVIYFNPVAHTEYNRLECPPPS*MQSSSS
Trigger: GCTGCTGCTGCTCTGCATCCAGCTCGGGGGAGGACA...TTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp AGAAGGAGCTCTAGTCCTTGGTTAGGCATCCAAATTGTAGGTACCATTCATCCAACAGGGCCAAAGCAATaGTACCAGAGTAGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: RRSSSPWLGIQIVGTIHPTGPKQ*YQSSWV
Trigger: CACCCAACTACTCTGGTACCATTGCTTTGGCCCTGT...TGGATGAATGGTACCTACAATTTGGATGCCTAACCAAGGACTAGAGCTCCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CCA 90 bp TCATCCTTCAGCTCGGTATTCCTGATGTGTTTCGATAGTCATCACTTTATCCAGGGAGGTCCACGGATATaGTTCCACATCTGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: SSFSSVFLMCFDSHHFIQGGPRI*FHIWPE
Trigger: TTCTGGCCAGATGTGGAACCATATCCGTGGACCTCC...CTGGATAAAGTGATGACTATCGAAACACATCAGGAATACCGAGCTGAAGGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR CCA 90 bp ACTAGGCAAATTATCCGTCTTTTTCCAACATCGCCTTTCGAAGTTGCTGCTTCAGGAGGTCCACGGATATaGTTCCACATCTGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: TRQIIRLFPTSPFEVAASGGPRI*FHIWPE
Trigger: TTCTGGCCAGATGTGGAACCATATCCGTGGACCTCC...TGAAGCAGCAACTTCGAAAGGCGATGTTGGAAAAAGACGGATAATTTGCCTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515859.5
CDS-3UTR CCA 90 bp AGACCACCAGGCCCAATCCCACTAGGCAAATTATCCGTCTTTTTCCAACATCGCCACTTGTCCATTGTGTaGGTTCTTATGAGCATATGG +
Preference number: 4 (lower is better)
Translates to: RPPGPIPLGKLSVFFQHRHLSIV*VLMSIW
Trigger: CCATATGCTCATAAGAACCCACACAATGGACAAGTG...GCGATGTTGGAAAAAGACGGATAATTTGCCTAGTGGGATTGGGCCTGGTGGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515859.5
CDS-3UTR TCA 90 bp CTCAATGGTTGTACACCCGTTTCTTGTTTGAGGCTATATAGCTGGAACTCCCAAGTTACAAAAAGCAGATaGATAGCGCCAGGAGTTCGC +
Preference number: 4 (lower is better)
Translates to: LNGCTPVSCLRLYSWNSQVTKSR*IAPGVR
Trigger: GCGAACTCCTGGCGCTATTCATCTGCTTTTTGTAAC...TTGGGAGTTCCAGCTATATAGCCTCAAACAAGAAACGGGTGTACAACCATTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CCA 90 bp TGCAATTCTGCCTATAGCATTTTCCAGTCAGTAACGACTTATGTTGAGGCAGTAGGAGGTCCACGGATATaGTTCCACATCTGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: CNSAYSIFQSVTTYVEAVGGPRI*FHIWPE
Trigger: TTCTGGCCAGATGTGGAACCATATCCGTGGACCTCC...TACTGCCTCAACATAAGTCGTTACTGACTGGAAAATGCTATAGGCAGAATTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR TCA 90 bp CTCAATGGTTGTACACCCGTTTCTTGTTTGAGGCTATATAGCTGGAACTCCCAAATTCATTCGGAAGATTaGGCGTCTGGAACTCCATTC +
Preference number: 4 (lower is better)
Translates to: LNGCTPVSCLRLYSWNSQIHSED*ASGTPF
Trigger: GAATGGAGTTCCAGACGCTCAATCTTCCGAATGAAT...TTGGGAGTTCCAGCTATATAGCCTCAAACAAGAAACGGGTGTACAACCATTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR TCA 90 bp ACTAGGCAAATTATCCGTCTTTTTCCAACATCGCCTTTCGAAGTTGCTGCTTCATTCATGTTGAGCTGCTaGAAAACGTCTGTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: TRQIIRLFPTSPFEVAASFMLSC*KTSVPS
Trigger: TGAGGGGACAGACGTTTTTCAGCAGCTCAACATGAA...TGAAGCAGCAACTTCGAAAGGCGATGTTGGAAAAAGACGGATAATTTGCCTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515859.5
CDS-3UTR CCA 90 bp TCATCCTTCAGCTCGGTATTCCTGATGTGTTTCGATAGTCATCACTTTATCCAGGGAAGATTGAGCGTCTaGAACTCCATTCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: SSFSSVFLMCFDSHHFIQGRLSV*NSIPSA
Trigger: AGCTGATGGAATGGAGTTCCAGACGCTCAATCTTCC...CTGGATAAAGTGATGACTATCGAAACACATCAGGAATACCGAGCTGAAGGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR CCA 90 bp TGCAATTCTGCCTATAGCATTTTCCAGTCAGTAACGACTTATGTTGAGGCAGTAACAGGGCCAAAGCAATaGTACCAGAGTAGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: CNSAYSIFQSVTTYVEAVTGPKQ*YQSSWV
Trigger: CACCCAACTACTCTGGTACCATTGCTTTGGCCCTGT...TACTGCCTCAACATAAGTCGTTACTGACTGGAAAATGCTATAGGCAGAATTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CCA 90 bp AAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAAATGATTAACTCCACGACAGGGCCAAAGCAATaGTACCAGAGTAGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: KYICWGWKHCICQMINSTTGPKQ*YQSSWV
Trigger: CACCCAACTACTCTGGTACCATTGCTTTGGCCCTGT...CGTGGAGTTAATCATTTGACAGATGCAATGCTTCCACCCCCAACAAATATACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR TCA 90 bp ACTAGGCAAATTATCCGTCTTTTTCCAACATCGCCTTTCGAAGTTGCTGCTTCAATTCATTCGGAAGATTaGGCGTCTGGAACTCCATTC +
Preference number: 4 (lower is better)
Translates to: TRQIIRLFPTSPFEVAASIHSED*ASGTPF
Trigger: GAATGGAGTTCCAGACGCTCAATCTTCCGAATGAAT...TGAAGCAGCAACTTCGAAAGGCGATGTTGGAAAAAGACGGATAATTTGCCTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515859.5
CDS-3UTR TCA 90 bp GCAAATCCCACTTGGCTTCATTTAATTAAAAAGTCCGTCTTTTTCCAACATCGCTTGTGTGGGTTCTTATaGGCATATGGAGGTCCACGG +
Preference number: 4 (lower is better)
Translates to: ANPTWLHLIKKSVFFQHRLCGFL*AYGGPR
Trigger: CCGTGGACCTCCATATGCTCATAAGAACCCACACAA...GCGATGTTGGAAAAAGACGGACTTTTTAATTAAATGAAGCCAAGTGGGATTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000510836.5
CDS-3UTR TCA 90 bp CAGAAGTTAAGAAAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAAATGTTGTGTGGGTTCTTATaGGCATATGGAGGTCCACGG +
Preference number: 4 (lower is better)
Translates to: QKLRKYICWGWKHCICQMLCGFL*AYGGPR
Trigger: CCGTGGACCTCCATATGCTCATAAGAACCCACACAA...CATTTGACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR TCA 90 bp CTCAATGGTTGTACACCCGTTTCTTGTTTGAGGCTATATAGCTGGAACTCCCAAGTTTGGAACGCACAGTaGATCTGGTTAAAAAGTGAC +
Preference number: 4 (lower is better)
Translates to: LNGCTPVSCLRLYSWNSQVWNAQ*IWLKSD
Trigger: GTCACTTTTTAACCAGATTCACTGTGCGTTCCAAAC...TTGGGAGTTCCAGCTATATAGCCTCAAACAAGAAACGGGTGTACAACCATTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR TCA 90 bp TCATCCTTCAGCTCGGTATTCCTGATGTGTTTCGATAGTCATCACTTTATCCAGTCAGCTCGGTATTCCTaGTGTGTTTCGATAGTCATC +
Preference number: 4 (lower is better)
Translates to: SSFSSVFLMCFDSHHFIQSARYS*CVSIVI
Trigger: GATGACTATCGAAACACATCAGGAATACCGAGCTGA...CTGGATAAAGTGATGACTATCGAAACACATCAGGAATACCGAGCTGAAGGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR GCA 90 bp CTCAATGGTTGTACACCCGTTTCTTGTTTGAGGCTATATAGCTGGAACTCCCAATATTCTTCATTAGCTTaGCTGCACACAGAACACTGC +
Preference number: 4 (lower is better)
Translates to: LNGCTPVSCLRLYSWNSQYSSLA*LHTEHC
Trigger: GCAGTGTTCTGTGTGCAGGCAAGCTAATGAAGAATA...TTGGGAGTTCCAGCTATATAGCCTCAAACAAGAAACGGGTGTACAACCATTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CCA 90 bp AAACAGAAGTTAAGAAAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAAGGAGGTCCACGGATATaGTTCCACATCTGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: KQKLRKYICWGWKHCICQGGPRI*FHIWPE
Trigger: TTCTGGCCAGATGTGGAACCATATCCGTGGACCTCC...TTGACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTTCTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR TCA 90 bp AATCTCAGCTTGATGTCAATGATCCATGAAATTAAACCTTGGAGAATTCCTGCCGTTACAAAAAGCAGATaGATAGCGCCAGGAGTTCGC +
Preference number: 4 (lower is better)
Translates to: NLSLMSMIHEIKPWRIPAVTKSR*IAPGVR
Trigger: GCGAACTCCTGGCGCTATTCATCTGCTTTTTGTAAC...GGCAGGAATTCTCCAAGGTTTAATTTCATGGATCATTGACATCAAGCTGAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR TCA 90 bp AGTAGAAAACTGAAGAAGAAGACCACCAGGCCCAATCCCACTAGGCAAATTATCCATAGTCCACCATACTaGAGAAGAGCTTGTTACAAA +
Preference number: 4 (lower is better)
Translates to: SRKLKKKTTRPNPTRQIIHSPPY*RRACYK
Trigger: TTTGTAACAAGCTCTTCTTCAGTATGGTGGACTATG...GATAATTTGCCTAGTGGGATTGGGCCTGGTGGTCTTCTTCTTCAGTTTTCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515859.5
CDS-3UTR TCA 90 bp GCAAATCCCACTTGGCTTCATTTAATTAAAAAGTCCGTCTTTTTCCAACATCGCTTCATGTTGAGCTGCTaGAAAACGTCTGTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: ANPTWLHLIKKSVFFQHRFMLSC*KTSVPS
Trigger: TGAGGGGACAGACGTTTTTCAGCAGCTCAACATGAA...GCGATGTTGGAAAAAGACGGACTTTTTAATTAAATGAAGCCAAGTGGGATTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000510836.5
CDS-3UTR TCA 90 bp TTCAGCTCGGTATTCCTGATGTGTTTCGATAGTCATCACTTTATCCAGATAAAGGAGCAGAGTTCATGTTaGGCTGCTGAAAAACGTCTG +
Preference number: 4 (lower is better)
Translates to: FSSVFLMCFDSHHFIQIKEQSSC*AAEKRL
Trigger: CAGACGTTTTTCAGCAGCTCAACATGAACTCTGCTC...CTTTATCTGGATAAAGTGATGACTATCGAAACACATCAGGAATACCGAGCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR TCA 90 bp TCGCATGTATGTGATTTTGCACGTTACATTCTGCAAGCAAACTATATGTTTGAGTTGTGTGGGTTCTTATaGGCATATGGAGGTCCACGG +
Preference number: 4 (lower is better)
Translates to: SHVCDFARYILQANYMFELCGFL*AYGGPR
Trigger: CCGTGGACCTCCATATGCTCATAAGAACCCACACAA...CTCAAACATATAGTTTGCTTGCAGAATGTAACGTGCAAAATCACATACATGCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR TCA 90 bp TCATCCTTCAGCTCGGTATTCCTGATGTGTTTCGATAGTCATCACTTTATCCAGTACCAGAATAATGTGTaGTTCTGCCACAAACTGAGC +
Preference number: 4 (lower is better)
Translates to: SSFSSVFLMCFDSHHFIQYQNNV*FCHKLS
Trigger: GCTCAGTTTGTGGCAGAATCACACATTATTCTGGTA...CTGGATAAAGTGATGACTATCGAAACACATCAGGAATACCGAGCTGAAGGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR TCA 90 bp CTCAATGGTTGTACACCCGTTTCTTGTTTGAGGCTATATAGCTGGAACTCCCAACAAAGATTGAGGATTTaGTGGAAAGCTGGTTGCATA +
Preference number: 4 (lower is better)
Translates to: LNGCTPVSCLRLYSWNSQQRLRI*WKAGCI
Trigger: TATGCAACCAGCTTTCCATCAAATCCTCAATCTTTG...TTGGGAGTTCCAGCTATATAGCCTCAAACAAGAAACGGGTGTACAACCATTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR GCA 90 bp TCGCATGTATGTGATTTTGCACGTTACATTCTGCAAGCAAACTATATGTTTGAGCAAACTGAGCCTGGCTaGTCCCATGAATGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: SHVCDFARYILQANYMFEQTEPG*SHECSS
Trigger: TGAGCTACATTCATGGGAGCAGCCAGGCTCAGTTTG...CTCAAACATATAGTTTGCTTGCAGAATGTAACGTGCAAAATCACATACATGCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR GCA 90 bp GTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACCAAACTGAGCCTGGCTaGTCCCATGAATGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: VIYFNPVAHTEYNRLEKHQTEPG*SHECSS
Trigger: TGAGCTACATTCATGGGAGCAGCCAGGCTCAGTTTG...GTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
CDS-3UTR GCA 90 bp AAACAGAAGTTAAGAAAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAACAAACTGAGCCTGGCTaGTCCCATGAATGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: KQKLRKYICWGWKHCICQQTEPG*SHECSS
Trigger: TGAGCTACATTCATGGGAGCAGCCAGGCTCAGTTTG...TTGACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTTCTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR CCA 90 bp TTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTTTGGGAGGTCCACGGATATaGTTCCACATCTGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: FISILWHTLNITGLKNTLGGPRI*FHIWPE
Trigger: TTCTGGCCAGATGTGGAACCATATCCGTGGACCTCC...CAAAGTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp TACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAGGAGGTCCACGGATATaGTTCCACATCTGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: YIVIYFNPVAHTEYNRLEGGPRI*FHIWPE
Trigger: TTCTGGCCAGATGTGGAACCATATCCGTGGACCTCC...TTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR TCA 90 bp ACAGAAGTTAAGAAAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAAATGTTACAAAAAGCAGATaGATAGCGCCAGGAGTTCGC +
Preference number: 4 (lower is better)
Translates to: TEVKKVYLLGVEALHLSNVTKSR*IAPGVR
Trigger: GCGAACTCCTGGCGCTATTCATCTGCTTTTTGTAAC...ATTTGACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR TCA 90 bp ACAGAAGTTAAGAAAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAAATTTCATGTTGAGCTGCTaGAAAACGTCTGTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: TEVKKVYLLGVEALHLSNFMLSC*KTSVPS
Trigger: TGAGGGGACAGACGTTTTTCAGCAGCTCAACATGAA...ATTTGACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR TCA 90 bp GTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACGAGCAGAGTTCATGTTaGGCTGCTGAAAAACGTCTG +
Preference number: 4 (lower is better)
Translates to: VIYFNPVAHTEYNRLEKHEQSSC*AAEKRL
Trigger: CAGACGTTTTTCAGCAGCTCAACATGAACTCTGCTC...GTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR TCA 90 bp AACAAACAGAAGTTAAGAAAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTGAGCAGAGTTCATGTTaGGCTGCTGAAAAACGTCTG +
Preference number: 4 (lower is better)
Translates to: NKQKLRKYICWGWKHCICEQSSC*AAEKRL
Trigger: CAGACGTTTTTCAGCAGCTCAACATGAACTCTGCTC...ACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTTCTGTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR TCA 90 bp TGCAATTCTGCCTATAGCATTTTCCAGTCAGTAACGACTTATGTTGAGGCAGTAAGTAGTTGGGTGGTCTaGAAACCCGAATATGAACAT +
Preference number: 4 (lower is better)
Translates to: CNSAYSIFQSVTTYVEAVSSWVV*KPEYEH
Trigger: ATGTTCATATTCGGGTTTTCAGACCACCCAACTACT...TACTGCCTCAACATAAGTCGTTACTGACTGGAAAATGCTATAGGCAGAATTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR TCA 90 bp ATTACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGTTGTGTGGGTTCTTATaGGCATATGGAGGTCCACGG +
Preference number: 4 (lower is better)
Translates to: ITLSFISILWHTLNITGLLCGFL*AYGGPR
Trigger: CCGTGGACCTCCATATGCTCATAAGAACCCACACAA...CAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR TCA 90 bp CTAAATCTCAGCTTGATGTCAATGATCCATGAAATTAAACCTTGGAGAATTCCTTTGTGTGGGTTCTTATaGGCATATGGAGGTCCACGG +
Preference number: 4 (lower is better)
Translates to: LNLSLMSMIHEIKPWRIPLCGFL*AYGGPR
Trigger: CCGTGGACCTCCATATGCTCATAAGAACCCACACAA...AGGAATTCTCCAAGGTTTAATTTCATGGATCATTGACATCAAGCTGAGATTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR TCA 90 bp ATTCTGCAAGCAAACTATATGTTTGAGCCACTCTTTGCAATTCTGCCTATAGCACACCCGTTTCTTGTTTaGGGCTATATAGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: ILQANYMFEPLFAILPIAHPFLV*GYIAGT
Trigger: AGTTCCAGCTATATAGCCTCAAACAAGAAACGGGTG...TGCTATAGGCAGAATTGCAAAGAGTGGCTCAAACATATAGTTTGCTTGCAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR TCA 90 bp AGAAGGAGCTCTAGTCCTTGGTTAGGCATCCAAATTGTAGGTACCATTCATCCAAGTAACGACTTATGTTaGGGCAGTATATTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: RRSSSPWLGIQIVGTIHPSNDLC*GSIFCS
Trigger: AGAGCAAAATATACTGCCTCAACATAAGTCGTTACT...TGGATGAATGGTACCTACAATTTGGATGCCTAACCAAGGACTAGAGCTCCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR TCA 90 bp ATTCTGCAAGCAAACTATATGTTTGAGCCACTCTTTGCAATTCTGCCTATAGCACTGGGCTTACTCATGTaGATATCTAATGCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: ILQANYMFEPLFAILPIALGLLM*ISNARN
Trigger: GTTCCTGGCATTAGATATTCACATGAGTAAGCCCAG...TGCTATAGGCAGAATTGCAAAGAGTGGCTCAAACATATAGTTTGCTTGCAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382020.8
CDS-3UTR GCA 90 bp ACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAACAAACTGAGCCTGGCTaGTCCCATGAATGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: TLSFISILWHTLNITGLKQTEPG*SHECSS
Trigger: TGAGCTACATTCATGGGAGCAGCCAGGCTCAGTTTG...TTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
CDS-3UTR GCA 90 bp AAATTAAACCTTGGAGAATTCCTGCCATACAATAAAAGGATGATCTCAACACAGCAAACTGAGCCTGGCTaGTCCCATGAATGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: KLNLGEFLPYNKRMISTQQTEPG*SHECSS
Trigger: TGAGCTACATTCATGGGAGCAGCCAGGCTCAGTTTG...CTGTGTTGAGATCATCCTTTTATTGTATGGCAGGAATTCTCCAAGGTTTAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR GCA 90 bp TGCAATTCTGCCTATAGCATTTTCCAGTCAGTAACGACTTATGTTGAGGCAGTATTACAGGTCAAGTTCTaGCTAGTGATAGGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: CNSAYSIFQSVTTYVEAVLQVKF*LVIGSD
Trigger: ATCACTGCCTATCACTAGGCAGAACTTGACCTGTAA...TACTGCCTCAACATAAGTCGTTACTGACTGGAAAATGCTATAGGCAGAATTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CCA 90 bp AACAAACAGAAGTTAAGAAAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTGGAAGATTGAGCGTCTaGAACTCCATTCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: NKQKLRKYICWGWKHCICGRLSV*NSIPSA
Trigger: AGCTGATGGAATGGAGTTCCAGACGCTCAATCTTCC...ACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTTCTGTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR CCA 90 bp CTCAATGGTTGTACACCCGTTTCTTGTTTGAGGCTATATAGCTGGAACTCCCAAGCAAATCCAATTCTTTaGAGGTCAAAAGTATCAGCT +
Preference number: 4 (lower is better)
Translates to: LNGCTPVSCLRLYSWNSQANPIL*RSKVSA
Trigger: AGCTGATACTTTTGACCTCCAAAGAATTGGATTTGC...TTGGGAGTTCCAGCTATATAGCCTCAAACAAGAAACGGGTGTACAACCATTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CCA 90 bp TTCAGCTCGGTATTCCTGATGTGTTTCGATAGTCATCACTTTATCCAGATAAAGACCAGAGTAGTTGGGTaGTCTGAAAACCCGAATATG +
Preference number: 4 (lower is better)
Translates to: FSSVFLMCFDSHHFIQIKTRVVG*SENPNM
Trigger: CATATTCGGGTTTTCAGACCACCCAACTACTCTGGT...CTTTATCTGGATAAAGTGATGACTATCGAAACACATCAGGAATACCGAGCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR CCA 90 bp ATTACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGACAGGGCCAAAGCAATaGTACCAGAGTAGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: ITLSFISILWHTLNITGLTGPKQ*YQSSWV
Trigger: CACCCAACTACTCTGGTACCATTGCTTTGGCCCTGT...CAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp AAATTAAACCTTGGAGAATTCCTGCCATACAATAAAAGGATGATCTCAACACAGACAGGGCCAAAGCAATaGTACCAGAGTAGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: KLNLGEFLPYNKRMISTQTGPKQ*YQSSWV
Trigger: CACCCAACTACTCTGGTACCATTGCTTTGGCCCTGT...CTGTGTTGAGATCATCCTTTTATTGTATGGCAGGAATTCTCCAAGGTTTAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR CCA 90 bp TACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAACAGGGCCAAAGCAATaGTACCAGAGTAGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: YIVIYFNPVAHTEYNRLETGPKQ*YQSSWV
Trigger: CACCCAACTACTCTGGTACCATTGCTTTGGCCCTGT...TTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp TCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTACAGGGCCAAAGCAATaGTACCAGAGTAGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: SFISILWHTLNITGLKNTTGPKQ*YQSSWV
Trigger: CACCCAACTACTCTGGTACCATTGCTTTGGCCCTGT...AGTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp AAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAAATGATTAACTCCACGGTTCTTATGAGCATATaGAGGTCCACGGATATGGTT +
Preference number: 4 (lower is better)
Translates to: KYICWGWKHCICQMINSTVLMSI*RSTDMV
Trigger: AACCATATCCGTGGACCTCCATATGCTCATAAGAAC...CGTGGAGTTAATCATTTGACAGATGCAATGCTTCCACCCCCAACAAATATACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR CCA 90 bp CTCAATGGTTGTACACCCGTTTCTTGTTTGAGGCTATATAGCTGGAACTCCCAAGATAGCCGTGGTACTTaGAACGAAATATTGAAAGTA +
Preference number: 4 (lower is better)
Translates to: LNGCTPVSCLRLYSWNSQDSRGT*NEILKV
Trigger: TACTTTCAATATTTCGTTCCAAGTACCACGGCTATC...TTGGGAGTTCCAGCTATATAGCCTCAAACAAGAAACGGGTGTACAACCATTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CCA 90 bp CTCAATGGTTGTACACCCGTTTCTTGTTTGAGGCTATATAGCTGGAACTCCCAAGATTTGATGGAAAGCTaGTTGCATAAAACACATGAG +
Preference number: 4 (lower is better)
Translates to: LNGCTPVSCLRLYSWNSQDLMES*LHKTHE
Trigger: CTCATGTGTTTTATGCAACCAGCTTTCCATCAAATC...TTGGGAGTTCCAGCTATATAGCCTCAAACAAGAAACGGGTGTACAACCATTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR TCA 90 bp GTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACATTCATTCGGAAGATTaGGCGTCTGGAACTCCATTC +
Preference number: 4 (lower is better)
Translates to: VIYFNPVAHTEYNRLEKHIHSED*ASGTPF
Trigger: GAATGGAGTTCCAGACGCTCAATCTTCCGAATGAAT...GTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR TCA 90 bp ACAGAAGTTAAGAAAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAAATATTCATTCGGAAGATTaGGCGTCTGGAACTCCATTC +
Preference number: 4 (lower is better)
Translates to: TEVKKVYLLGVEALHLSNIHSED*ASGTPF
Trigger: GAATGGAGTTCCAGACGCTCAATCTTCCGAATGAAT...ATTTGACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR TCA 90 bp TGCAATTCTGCCTATAGCATTTTCCAGTCAGTAACGACTTATGTTGAGGCAGTAGAGTTCGCCAGTATTTaGTATTCTTCATTAGCTTGC +
Preference number: 4 (lower is better)
Translates to: CNSAYSIFQSVTTYVEAVEFASI*YSSLAC
Trigger: GCAAGCTAATGAAGAATATCAAATACTGGCGAACTC...TACTGCCTCAACATAAGTCGTTACTGACTGGAAAATGCTATAGGCAGAATTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR TCA 90 bp TCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTGTTACAAAAAGCAGATaGATAGCGCCAGGAGTTCGC +
Preference number: 4 (lower is better)
Translates to: SFISILWHTLNITGLKNTVTKSR*IAPGVR
Trigger: GCGAACTCCTGGCGCTATTCATCTGCTTTTTGTAAC...AGTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR TCA 90 bp ATTACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGGTTACAAAAAGCAGATaGATAGCGCCAGGAGTTCGC +
Preference number: 4 (lower is better)
Translates to: ITLSFISILWHTLNITGLVTKSR*IAPGVR
Trigger: GCGAACTCCTGGCGCTATTCATCTGCTTTTTGTAAC...CAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR TCA 90 bp TACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAGTTACAAAAAGCAGATaGATAGCGCCAGGAGTTCGC +
Preference number: 4 (lower is better)
Translates to: YIVIYFNPVAHTEYNRLEVTKSR*IAPGVR
Trigger: GCGAACTCCTGGCGCTATTCATCTGCTTTTTGTAAC...TTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR TCA 90 bp ATTACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGTTCATGTTGAGCTGCTaGAAAACGTCTGTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: ITLSFISILWHTLNITGLFMLSC*KTSVPS
Trigger: TGAGGGGACAGACGTTTTTCAGCAGCTCAACATGAA...CAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR TCA 90 bp GTAGGTACCATTCATCCAGTTCCCTGTCCTATATACCTTTATCTAGTTATAATTTTCATGTTGAGCTGCTaGAAAACGTCTGTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: VGTIHPVPCPIYLYLVIIFMLSC*KTSVPS
Trigger: TGAGGGGACAGACGTTTTTCAGCAGCTCAACATGAA...AATTATAACTAGATAAAGGTATATAGGACAGGGAACTGGATGAATGGTACCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR TCA 90 bp TCGGTATTCCTGATGTGTTTCGATAGTCATCACTTTATCCAGATAAAGTATACTTTCATGTTGAGCTGCTaGAAAACGTCTGTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: SVFLMCFDSHHFIQIKYTFMLSC*KTSVPS
Trigger: TGAGGGGACAGACGTTTTTCAGCAGCTCAACATGAA...AGTATACTTTATCTGGATAAAGTGATGACTATCGAAACACATCAGGAATACCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR TCA 90 bp TTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTTTGGAGCAGAGTTCATGTTaGGCTGCTGAAAAACGTCTG +
Preference number: 4 (lower is better)
Translates to: FISILWHTLNITGLKNTLEQSSC*AAEKRL
Trigger: CAGACGTTTTTCAGCAGCTCAACATGAACTCTGCTC...CAAAGTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR TCA 90 bp ACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAGAGCAGAGTTCATGTTaGGCTGCTGAAAAACGTCTG +
Preference number: 4 (lower is better)
Translates to: TLSFISILWHTLNITGLKEQSSC*AAEKRL
Trigger: CAGACGTTTTTCAGCAGCTCAACATGAACTCTGCTC...TTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR TCA 90 bp TCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTGAGCAGAGTTCATGTTaGGCTGCTGAAAAACGTCTG +
Preference number: 4 (lower is better)
Translates to: SFISILWHTLNITGLKNTEQSSC*AAEKRL
Trigger: CAGACGTTTTTCAGCAGCTCAACATGAACTCTGCTC...AGTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR TCA 90 bp ATTCTGCAAGCAAACTATATGTTTGAGCCACTCTTTGCAATTCTGCCTATAGCATACCAGAATAATGTGTaGTTCTGCCACAAACTGAGC +
Preference number: 4 (lower is better)
Translates to: ILQANYMFEPLFAILPIAYQNNV*FCHKLS
Trigger: GCTCAGTTTGTGGCAGAATCACACATTATTCTGGTA...TGCTATAGGCAGAATTGCAAAGAGTGGCTCAAACATATAGTTTGCTTGCAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR TCA 90 bp GTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACAGCTGGAACTCCCAATaGAAACAATTCTCCATGGTC +
Preference number: 4 (lower is better)
Translates to: VIYFNPVAHTEYNRLEKHSWNSQ*KQFSMV
Trigger: GACCATGGAGAATTGTTTTCATTGGGAGTTCCAGCT...GTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR TCA 90 bp AAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAAATGATTAACTCCACGATTGCATCTGTCAAATaGTTAACTCCACGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: KYICWGWKHCICQMINSTIASVK*LTPRVS
Trigger: ACTGACACGTGGAGTTAATCATTTGACAGATGCAAT...CGTGGAGTTAATCATTTGACAGATGCAATGCTTCCACCCCCAACAAATATACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR GCA 90 bp AGAAGGAGCTCTAGTCCTTGGTTAGGCATCCAAATTGTAGGTACCATTCATCCATATAGAGTTTTTAAGTaGCATGGTCCAAATCACATC +
Preference number: 4 (lower is better)
Translates to: RRSSSPWLGIQIVGTIHPYRVFK*HGPNHI
Trigger: GATGTGATTTGGACCATGGCACTTAAAAACTCTATA...TGGATGAATGGTACCTACAATTTGGATGCCTAACCAAGGACTAGAGCTCCTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503731.6
CDS-3UTR CCA 90 bp ATTACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGGGAAGATTGAGCGTCTaGAACTCCATTCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: ITLSFISILWHTLNITGLGRLSV*NSIPSA
Trigger: AGCTGATGGAATGGAGTTCCAGACGCTCAATCTTCC...CAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp TCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTGGAAGATTGAGCGTCTaGAACTCCATTCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: SFISILWHTLNITGLKNTGRLSV*NSIPSA
Trigger: AGCTGATGGAATGGAGTTCCAGACGCTCAATCTTCC...AGTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp TACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAGGAAGATTGAGCGTCTaGAACTCCATTCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: YIVIYFNPVAHTEYNRLEGRLSV*NSIPSA
Trigger: AGCTGATGGAATGGAGTTCCAGACGCTCAATCTTCC...TTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp AAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAAATGATTAACTCCACGCTTAGGTCTGCCTTTTaGAGGAAAATGCATGAATGT +
Preference number: 4 (lower is better)
Translates to: KYICWGWKHCICQMINSTLRSAF*RKMHEC
Trigger: ACATTCATGCATTTTCCTCCAAAAGGCAGACCTAAG...CGTGGAGTTAATCATTTGACAGATGCAATGCTTCCACCCCCAACAAATATACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR CCA 90 bp ACAGAAGTTAAGAAAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAAATACCAGAGTAGTTGGGTaGTCTGAAAACCCGAATATG +
Preference number: 4 (lower is better)
Translates to: TEVKKVYLLGVEALHLSNTRVVG*SENPNM
Trigger: CATATTCGGGTTTTCAGACCACCCAACTACTCTGGT...ATTTGACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR CCA 90 bp AATCTCAGCTTGATGTCAATGATCCATGAAATTAAACCTTGGAGAATTCCTGCCCACTTGTCCATTGTGTaGGTTCTTATGAGCATATGG +
Preference number: 4 (lower is better)
Translates to: NLSLMSMIHEIKPWRIPAHLSIV*VLMSIW
Trigger: CCATATGCTCATAAGAACCCACACAATGGACAAGTG...GGCAGGAATTCTCCAAGGTTTAATTTCATGGATCATTGACATCAAGCTGAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR CCA 90 bp AAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAAATGATTAACTCCACGTATATTTGTTGGGGGTaGAAGCATTGCATCTGTCAA +
Preference number: 4 (lower is better)
Translates to: KYICWGWKHCICQMINSTYICWG*KHCICQ
Trigger: TTGACAGATGCAATGCTTCCACCCCCAACAAATATA...CGTGGAGTTAATCATTTGACAGATGCAATGCTTCCACCCCCAACAAATATACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR CCA 90 bp AAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAAATGATTAACTCCACGAGAAAGTATATTTGTTaGGGGTGGAAGCATTGCATC +
Preference number: 4 (lower is better)
Translates to: KYICWGWKHCICQMINSTRKYIC*GWKHCI
Trigger: GATGCAATGCTTCCACCCCCAACAAATATACTTTCT...CGTGGAGTTAATCATTTGACAGATGCAATGCTTCCACCCCCAACAAATATACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR TCA 90 bp TCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTATTCATTCGGAAGATTaGGCGTCTGGAACTCCATTC +
Preference number: 4 (lower is better)
Translates to: SFISILWHTLNITGLKNTIHSED*ASGTPF
Trigger: GAATGGAGTTCCAGACGCTCAATCTTCCGAATGAAT...AGTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR TCA 90 bp AAATTAAACCTTGGAGAATTCCTGCCATACAATAAAAGGATGATCTCAACACAGATTCATTCGGAAGATTaGGCGTCTGGAACTCCATTC +
Preference number: 4 (lower is better)
Translates to: KLNLGEFLPYNKRMISTQIHSED*ASGTPF
Trigger: GAATGGAGTTCCAGACGCTCAATCTTCCGAATGAAT...CTGTGTTGAGATCATCCTTTTATTGTATGGCAGGAATTCTCCAAGGTTTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR TCA 90 bp TTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTTTGATTCATTCGGAAGATTaGGCGTCTGGAACTCCATTC +
Preference number: 4 (lower is better)
Translates to: FISILWHTLNITGLKNTLIHSED*ASGTPF
Trigger: GAATGGAGTTCCAGACGCTCAATCTTCCGAATGAAT...CAAAGTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR TCA 90 bp GCAAATCCCACTTGGCTTCATTTAATTAAAAAGTCCGTCTTTTTCCAACATCGCCATAGTCCACCATACTaGAGAAGAGCTTGTTACAAA +
Preference number: 4 (lower is better)
Translates to: ANPTWLHLIKKSVFFQHRHSPPY*RRACYK
Trigger: TTTGTAACAAGCTCTTCTTCAGTATGGTGGACTATG...GCGATGTTGGAAAAAGACGGACTTTTTAATTAAATGAAGCCAAGTGGGATTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000510836.5
CDS-3UTR TCA 90 bp TTTGCACGTTACATTCTGCAAGCAAACTATATGTTTGAGCCACTCTTTGCAATTAGTAGTTGGGTGGTCTaGAAACCCGAATATGAACAT +
Preference number: 4 (lower is better)
Translates to: FARYILQANYMFEPLFAISSWVV*KPEYEH
Trigger: ATGTTCATATTCGGGTTTTCAGACCACCCAACTACT...AATTGCAAAGAGTGGCTCAAACATATAGTTTGCTTGCAGAATGTAACGTGCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR TCA 90 bp AAACAGAAGTTAAGAAAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAAAGTAGTTGGGTGGTCTaGAAACCCGAATATGAACAT +
Preference number: 4 (lower is better)
Translates to: KQKLRKYICWGWKHCICQSSWVV*KPEYEH
Trigger: ATGTTCATATTCGGGTTTTCAGACCACCCAACTACT...TTGACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTTCTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR TCA 90 bp ATTCTGCAAGCAAACTATATGTTTGAGCCACTCTTTGCAATTCTGCCTATAGCACAGTCTTGTTATAGATaGACTCCAAGTTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: ILQANYMFEPLFAILPIAQSCYR*TPSCSF
Trigger: GAAGGAACAACTTGGAGTTCATCTATAACAAGACTG...TGCTATAGGCAGAATTGCAAAGAGTGGCTCAAACATATAGTTTGCTTGCAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR TCA 90 bp TTTGCACGTTACATTCTGCAAGCAAACTATATGTTTGAGCCACTCTTTGCAATTTACCAGAATAATGTGTaGTTCTGCCACAAACTGAGC +
Preference number: 4 (lower is better)
Translates to: FARYILQANYMFEPLFAIYQNNV*FCHKLS
Trigger: GCTCAGTTTGTGGCAGAATCACACATTATTCTGGTA...AATTGCAAAGAGTGGCTCAAACATATAGTTTGCTTGCAGAATGTAACGTGCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR TCA 90 bp GTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTACCAGAATAATGTGTaGTTCTGCCACAAACTGAGC +
Preference number: 4 (lower is better)
Translates to: VIYFNPVAHTEYNRLEKHYQNNV*FCHKLS
Trigger: GCTCAGTTTGTGGCAGAATCACACATTATTCTGGTA...GTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
CDS-3UTR TCA 90 bp AAACAGAAGTTAAGAAAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAATACCAGAATAATGTGTaGTTCTGCCACAAACTGAGC +
Preference number: 4 (lower is better)
Translates to: KQKLRKYICWGWKHCICQYQNNV*FCHKLS
Trigger: GCTCAGTTTGTGGCAGAATCACACATTATTCTGGTA...TTGACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTTCTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR TCA 90 bp ATTACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGCACCCGTTTCTTGTTTaGGGCTATATAGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: ITLSFISILWHTLNITGLHPFLV*GYIAGT
Trigger: AGTTCCAGCTATATAGCCTCAAACAAGAAACGGGTG...CAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR TCA 90 bp TCGCATGTATGTGATTTTGCACGTTACATTCTGCAAGCAAACTATATGTTTGAGGTTTGGAACGCACAGTaGATCTGGTTAAAAAGTGAC +
Preference number: 4 (lower is better)
Translates to: SHVCDFARYILQANYMFEVWNAQ*IWLKSD
Trigger: GTCACTTTTTAACCAGATTCACTGTGCGTTCCAAAC...CTCAAACATATAGTTTGCTTGCAGAATGTAACGTGCAAAATCACATACATGCGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR GCA 90 bp TCGCATGTATGTGATTTTGCACGTTACATTCTGCAAGCAAACTATATGTTTGAGTATTCTTCATTAGCTTaGCTGCACACAGAACACTGC +
Preference number: 4 (lower is better)
Translates to: SHVCDFARYILQANYMFEYSSLA*LHTEHC
Trigger: GCAGTGTTCTGTGTGCAGGCAAGCTAATGAAGAATA...CTCAAACATATAGTTTGCTTGCAGAATGTAACGTGCAAAATCACATACATGCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR GCA 90 bp GTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTATTCTTCATTAGCTTaGCTGCACACAGAACACTGC +
Preference number: 4 (lower is better)
Translates to: VIYFNPVAHTEYNRLEKHYSSLA*LHTEHC
Trigger: GCAGTGTTCTGTGTGCAGGCAAGCTAATGAAGAATA...GTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR GCA 90 bp AACAAACAGAAGTTAAGAAAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTTATTCTTCATTAGCTTaGCTGCACACAGAACACTGC +
Preference number: 4 (lower is better)
Translates to: NKQKLRKYICWGWKHCICYSSLA*LHTEHC
Trigger: GCAGTGTTCTGTGTGCAGGCAAGCTAATGAAGAATA...ACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTTCTGTTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR GCA 90 bp ACAGAAGTTAAGAAAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAAATTGGGGGTGGAAGCATTaGATCTGTCAAATGATTAAC +
Preference number: 4 (lower is better)
Translates to: TEVKKVYLLGVEALHLSNWGWKH*ICQMIN
Trigger: GTTAATCATTTGACAGATGCAATGCTTCCACCCCCA...ATTTGACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTTCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR CCA 90 bp TTCAGCTCGGTATTCCTGATGTGTTTCGATAGTCATCACTTTATCCAGATAAAGCTTAGGTCTGCCTTTTaGAGGAAAATGCATGAATGT +
Preference number: 4 (lower is better)
Translates to: FSSVFLMCFDSHHFIQIKLRSAF*RKMHEC
Trigger: ACATTCATGCATTTTCCTCCAAAAGGCAGACCTAAG...CTTTATCTGGATAAAGTGATGACTATCGAAACACATCAGGAATACCGAGCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR CCA 90 bp TGCAATTCTGCCTATAGCATTTTCCAGTCAGTAACGACTTATGTTGAGGCAGTAGCAAATCCAATTCTTTaGAGGTCAAAAGTATCAGCT +
Preference number: 4 (lower is better)
Translates to: CNSAYSIFQSVTTYVEAVANPIL*RSKVSA
Trigger: AGCTGATACTTTTGACCTCCAAAGAATTGGATTTGC...TACTGCCTCAACATAAGTCGTTACTGACTGGAAAATGCTATAGGCAGAATTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CCA 90 bp AAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAAATGATTAACTCCACGGCAAATCCAATTCTTTaGAGGTCAAAAGTATCAGCT +
Preference number: 4 (lower is better)
Translates to: KYICWGWKHCICQMINSTANPIL*RSKVSA
Trigger: AGCTGATACTTTTGACCTCCAAAGAATTGGATTTGC...CGTGGAGTTAATCATTTGACAGATGCAATGCTTCCACCCCCAACAAATATACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR CCA 90 bp ACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAACCAGAGTAGTTGGGTaGTCTGAAAACCCGAATATG +
Preference number: 4 (lower is better)
Translates to: TLSFISILWHTLNITGLKTRVVG*SENPNM
Trigger: CATATTCGGGTTTTCAGACCACCCAACTACTCTGGT...TTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp TCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTACCAGAGTAGTTGGGTaGTCTGAAAACCCGAATATG +
Preference number: 4 (lower is better)
Translates to: SFISILWHTLNITGLKNTTRVVG*SENPNM
Trigger: CATATTCGGGTTTTCAGACCACCCAACTACTCTGGT...AGTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp TTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTTTGACCAGAGTAGTTGGGTaGTCTGAAAACCCGAATATG +
Preference number: 4 (lower is better)
Translates to: FISILWHTLNITGLKNTLTRVVG*SENPNM
Trigger: CATATTCGGGTTTTCAGACCACCCAACTACTCTGGT...CAAAGTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp TACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAACCAGAGTAGTTGGGTaGTCTGAAAACCCGAATATG +
Preference number: 4 (lower is better)
Translates to: YIVIYFNPVAHTEYNRLETRVVG*SENPNM
Trigger: CATATTCGGGTTTTCAGACCACCCAACTACTCTGGT...TTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp TTTGCACGTTACATTCTGCAAGCAAACTATATGTTTGAGCCACTCTTTGCAATTGTTCTTATGAGCATATaGAGGTCCACGGATATGGTT +
Preference number: 4 (lower is better)
Translates to: FARYILQANYMFEPLFAIVLMSI*RSTDMV
Trigger: AACCATATCCGTGGACCTCCATATGCTCATAAGAAC...AATTGCAAAGAGTGGCTCAAACATATAGTTTGCTTGCAGAATGTAACGTGCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CCA 90 bp GTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACGTTCTTATGAGCATATaGAGGTCCACGGATATGGTT +
Preference number: 4 (lower is better)
Translates to: VIYFNPVAHTEYNRLEKHVLMSI*RSTDMV
Trigger: AACCATATCCGTGGACCTCCATATGCTCATAAGAAC...GTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp AAACAGAAGTTAAGAAAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAACACTTGTCCATTGTGTaGGTTCTTATGAGCATATGG +
Preference number: 4 (lower is better)
Translates to: KQKLRKYICWGWKHCICQHLSIV*VLMSIW
Trigger: CCATATGCTCATAAGAACCCACACAATGGACAAGTG...TTGACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTTCTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR TCA 90 bp ACAGAAGTTAAGAAAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAAATGAGTTCGCCAGTATTTaGTATTCTTCATTAGCTTGC +
Preference number: 4 (lower is better)
Translates to: TEVKKVYLLGVEALHLSNEFASI*YSSLAC
Trigger: GCAAGCTAATGAAGAATATCAAATACTGGCGAACTC...ATTTGACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTTCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR TCA 90 bp TCGCATGTATGTGATTTTGCACGTTACATTCTGCAAGCAAACTATATGTTTGAGCATAGTCCACCATACTaGAGAAGAGCTTGTTACAAA +
Preference number: 4 (lower is better)
Translates to: SHVCDFARYILQANYMFEHSPPY*RRACYK
Trigger: TTTGTAACAAGCTCTTCTTCAGTATGGTGGACTATG...CTCAAACATATAGTTTGCTTGCAGAATGTAACGTGCAAAATCACATACATGCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR TCA 90 bp GTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACCATAGTCCACCATACTaGAGAAGAGCTTGTTACAAA +
Preference number: 4 (lower is better)
Translates to: VIYFNPVAHTEYNRLEKHHSPPY*RRACYK
Trigger: TTTGTAACAAGCTCTTCTTCAGTATGGTGGACTATG...GTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR TCA 90 bp AACAAACAGAAGTTAAGAAAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCATAGTCCACCATACTaGAGAAGAGCTTGTTACAAA +
Preference number: 4 (lower is better)
Translates to: NKQKLRKYICWGWKHCICHSPPY*RRACYK
Trigger: TTTGTAACAAGCTCTTCTTCAGTATGGTGGACTATG...ACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTTCTGTTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR TCA 90 bp ACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAGTAGTTGGGTGGTCTaGAAACCCGAATATGAACAT +
Preference number: 4 (lower is better)
Translates to: TLSFISILWHTLNITGLKSSWVV*KPEYEH
Trigger: ATGTTCATATTCGGGTTTTCAGACCACCCAACTACT...TTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR TCA 90 bp AAATTAAACCTTGGAGAATTCCTGCCATACAATAAAAGGATGATCTCAACACAGAGTAGTTGGGTGGTCTaGAAACCCGAATATGAACAT +
Preference number: 4 (lower is better)
Translates to: KLNLGEFLPYNKRMISTQSSWVV*KPEYEH
Trigger: ATGTTCATATTCGGGTTTTCAGACCACCCAACTACT...CTGTGTTGAGATCATCCTTTTATTGTATGGCAGGAATTCTCCAAGGTTTAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR TCA 90 bp TACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAGTAGTTGGGTGGTCTaGAAACCCGAATATGAACAT +
Preference number: 4 (lower is better)
Translates to: YIVIYFNPVAHTEYNRLESSWVV*KPEYEH
Trigger: ATGTTCATATTCGGGTTTTCAGACCACCCAACTACT...TTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR TCA 90 bp TTTGCACGTTACATTCTGCAAGCAAACTATATGTTTGAGCCACTCTTTGCAATTCAGTCTTGTTATAGATaGACTCCAAGTTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: FARYILQANYMFEPLFAIQSCYR*TPSCSF
Trigger: GAAGGAACAACTTGGAGTTCATCTATAACAAGACTG...AATTGCAAAGAGTGGCTCAAACATATAGTTTGCTTGCAGAATGTAACGTGCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR TCA 90 bp GTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACCAGTCTTGTTATAGATaGACTCCAAGTTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: VIYFNPVAHTEYNRLEKHQSCYR*TPSCSF
Trigger: GAAGGAACAACTTGGAGTTCATCTATAACAAGACTG...GTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR TCA 90 bp ACAGAAGTTAAGAAAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAAATCAGTCTTGTTATAGATaGACTCCAAGTTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: TEVKKVYLLGVEALHLSNQSCYR*TPSCSF
Trigger: GAAGGAACAACTTGGAGTTCATCTATAACAAGACTG...ATTTGACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTTCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR TCA 90 bp AACAAACAGAAGTTAAGAAAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCTGAGGACTTTTGCCTaGGGTTATAGAGTTTTTAAG +
Preference number: 4 (lower is better)
Translates to: NKQKLRKYICWGWKHCICLRTFA*GYRVFK
Trigger: CTTAAAAACTCTATAACCTCAGGCAAAAGTCCTCAG...ACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTTCTGTTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR TCA 90 bp AAACAGAAGTTAAGAAAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAAGTAGACATTTTTATCTaGGGACTTTTGCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: KQKLRKYICWGWKHCICQVDIFI*GLLPEV
Trigger: AACCTCAGGCAAAAGTCCTCAGATAAAAATGTCTAC...TTGACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTTCTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR GCA 90 bp CTAAATCTCAGCTTGATGTCAATGATCCATGAAATTAAACCTTGGAGAATTCCTTATTCTTCATTAGCTTaGCTGCACACAGAACACTGC +
Preference number: 4 (lower is better)
Translates to: LNLSLMSMIHEIKPWRIPYSSLA*LHTEHC
Trigger: GCAGTGTTCTGTGTGCAGGCAAGCTAATGAAGAATA...AGGAATTCTCCAAGGTTTAATTTCATGGATCATTGACATCAAGCTGAGATTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR GCA 90 bp ACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAATATTCTTCATTAGCTTaGCTGCACACAGAACACTGC +
Preference number: 4 (lower is better)
Translates to: TLSFISILWHTLNITGLKYSSLA*LHTEHC
Trigger: GCAGTGTTCTGTGTGCAGGCAAGCTAATGAAGAATA...TTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR GCA 90 bp ATTACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGTATTCTTCATTAGCTTaGCTGCACACAGAACACTGC +
Preference number: 4 (lower is better)
Translates to: ITLSFISILWHTLNITGLYSSLA*LHTEHC
Trigger: GCAGTGTTCTGTGTGCAGGCAAGCTAATGAAGAATA...CAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR GCA 90 bp TTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTTTGCTAGTTGTGGTATGTTaGTTTCATCGTCTGATGCCT +
Preference number: 4 (lower is better)
Translates to: FISILWHTLNITGLKNTLLVVVC*FHRLMP
Trigger: AGGCATCAGACGATGAAAGCAACATACCACAACTAG...CAAAGTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR GCA 90 bp ACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAACTAGTTGTGGTATGTTaGTTTCATCGTCTGATGCCT +
Preference number: 4 (lower is better)
Translates to: TLSFISILWHTLNITGLKLVVVC*FHRLMP
Trigger: AGGCATCAGACGATGAAAGCAACATACCACAACTAG...TTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR GCA 90 bp TACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAATTACAGGTCAAGTTCTaGCTAGTGATAGGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: YIVIYFNPVAHTEYNRLELQVKF*LVIGSD
Trigger: ATCACTGCCTATCACTAGGCAGAACTTGACCTGTAA...TTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR GCA 90 bp TGCAATTCTGCCTATAGCATTTTCCAGTCAGTAACGACTTATGTTGAGGCAGTATTGCACGTTACATTCTaGAAGCAAACTATATGTTTG +
Preference number: 4 (lower is better)
Translates to: CNSAYSIFQSVTTYVEAVLHVTF*KQTICL
Trigger: CAAACATATAGTTTGCTTGCAGAATGTAACGTGCAA...TACTGCCTCAACATAAGTCGTTACTGACTGGAAAATGCTATAGGCAGAATTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR GCA 90 bp AAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAAATGATTAACTCCACGTATAGAGTTTTTAAGTaGCATGGTCCAAATCACATC +
Preference number: 4 (lower is better)
Translates to: KYICWGWKHCICQMINSTYRVFK*HGPNHI
Trigger: GATGTGATTTGGACCATGGCACTTAAAAACTCTATA...CGTGGAGTTAATCATTTGACAGATGCAATGCTTCCACCCCCAACAAATATACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR CCA 90 bp TCGCATGTATGTGATTTTGCACGTTACATTCTGCAAGCAAACTATATGTTTGAGCTTAGGTCTGCCTTTTaGAGGAAAATGCATGAATGT +
Preference number: 4 (lower is better)
Translates to: SHVCDFARYILQANYMFELRSAF*RKMHEC
Trigger: ACATTCATGCATTTTCCTCCAAAAGGCAGACCTAAG...CTCAAACATATAGTTTGCTTGCAGAATGTAACGTGCAAAATCACATACATGCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CCA 90 bp GTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACCTTAGGTCTGCCTTTTaGAGGAAAATGCATGAATGT +
Preference number: 4 (lower is better)
Translates to: VIYFNPVAHTEYNRLEKHLRSAF*RKMHEC
Trigger: ACATTCATGCATTTTCCTCCAAAAGGCAGACCTAAG...GTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp TTCAGCTCGGTATTCCTGATGTGTTTCGATAGTCATCACTTTATCCAGATAAAGGCAAATCCAATTCTTTaGAGGTCAAAAGTATCAGCT +
Preference number: 4 (lower is better)
Translates to: FSSVFLMCFDSHHFIQIKANPIL*RSKVSA
Trigger: AGCTGATACTTTTGACCTCCAAAGAATTGGATTTGC...CTTTATCTGGATAAAGTGATGACTATCGAAACACATCAGGAATACCGAGCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR CCA 90 bp ACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAGTTCTTATGAGCATATaGAGGTCCACGGATATGGTT +
Preference number: 4 (lower is better)
Translates to: TLSFISILWHTLNITGLKVLMSI*RSTDMV
Trigger: AACCATATCCGTGGACCTCCATATGCTCATAAGAAC...TTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp AAATTAAACCTTGGAGAATTCCTGCCATACAATAAAAGGATGATCTCAACACAGGTTCTTATGAGCATATaGAGGTCCACGGATATGGTT +
Preference number: 4 (lower is better)
Translates to: KLNLGEFLPYNKRMISTQVLMSI*RSTDMV
Trigger: AACCATATCCGTGGACCTCCATATGCTCATAAGAAC...CTGTGTTGAGATCATCCTTTTATTGTATGGCAGGAATTCTCCAAGGTTTAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR CCA 90 bp ACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAACACTTGTCCATTGTGTaGGTTCTTATGAGCATATGG +
Preference number: 4 (lower is better)
Translates to: TLSFISILWHTLNITGLKHLSIV*VLMSIW
Trigger: CCATATGCTCATAAGAACCCACACAATGGACAAGTG...TTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp ATTACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGCACTTGTCCATTGTGTaGGTTCTTATGAGCATATGG +
Preference number: 4 (lower is better)
Translates to: ITLSFISILWHTLNITGLHLSIV*VLMSIW
Trigger: CCATATGCTCATAAGAACCCACACAATGGACAAGTG...CAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp ATTCTGCAAGCAAACTATATGTTTGAGCCACTCTTTGCAATTCTGCCTATAGCAGATAGCCGTGGTACTTaGAACGAAATATTGAAAGTA +
Preference number: 4 (lower is better)
Translates to: ILQANYMFEPLFAILPIADSRGT*NEILKV
Trigger: TACTTTCAATATTTCGTTCCAAGTACCACGGCTATC...TGCTATAGGCAGAATTGCAAAGAGTGGCTCAAACATATAGTTTGCTTGCAGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CCA 90 bp CAGAAGTTAAGAAAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAAATGGATAGCCGTGGTACTTaGAACGAAATATTGAAAGTA +
Preference number: 4 (lower is better)
Translates to: QKLRKYICWGWKHCICQMDSRGT*NEILKV
Trigger: TACTTTCAATATTTCGTTCCAAGTACCACGGCTATC...CATTTGACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR TCA 90 bp TTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTTTGGAGTTCGCCAGTATTTaGTATTCTTCATTAGCTTGC +
Preference number: 4 (lower is better)
Translates to: FISILWHTLNITGLKNTLEFASI*YSSLAC
Trigger: GCAAGCTAATGAAGAATATCAAATACTGGCGAACTC...CAAAGTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR TCA 90 bp TCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTGAGTTCGCCAGTATTTaGTATTCTTCATTAGCTTGC +
Preference number: 4 (lower is better)
Translates to: SFISILWHTLNITGLKNTEFASI*YSSLAC
Trigger: GCAAGCTAATGAAGAATATCAAATACTGGCGAACTC...AGTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR TCA 90 bp AAATTAAACCTTGGAGAATTCCTGCCATACAATAAAAGGATGATCTCAACACAGGAGTTCGCCAGTATTTaGTATTCTTCATTAGCTTGC +
Preference number: 4 (lower is better)
Translates to: KLNLGEFLPYNKRMISTQEFASI*YSSLAC
Trigger: GCAAGCTAATGAAGAATATCAAATACTGGCGAACTC...CTGTGTTGAGATCATCCTTTTATTGTATGGCAGGAATTCTCCAAGGTTTAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR TCA 90 bp ACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAGAGTTCGCCAGTATTTaGTATTCTTCATTAGCTTGC +
Preference number: 4 (lower is better)
Translates to: TLSFISILWHTLNITGLKEFASI*YSSLAC
Trigger: GCAAGCTAATGAAGAATATCAAATACTGGCGAACTC...TTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR TCA 90 bp ATTACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGGAGTTCGCCAGTATTTaGTATTCTTCATTAGCTTGC +
Preference number: 4 (lower is better)
Translates to: ITLSFISILWHTLNITGLEFASI*YSSLAC
Trigger: GCAAGCTAATGAAGAATATCAAATACTGGCGAACTC...CAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR TCA 90 bp ACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAACATAGTCCACCATACTaGAGAAGAGCTTGTTACAAA +
Preference number: 4 (lower is better)
Translates to: TLSFISILWHTLNITGLKHSPPY*RRACYK
Trigger: TTTGTAACAAGCTCTTCTTCAGTATGGTGGACTATG...TTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR TCA 90 bp TCGGTATTCCTGATGTGTTTCGATAGTCATCACTTTATCCAGATAAAGTATACTCATAGTCCACCATACTaGAGAAGAGCTTGTTACAAA +
Preference number: 4 (lower is better)
Translates to: SVFLMCFDSHHFIQIKYTHSPPY*RRACYK
Trigger: TTTGTAACAAGCTCTTCTTCAGTATGGTGGACTATG...AGTATACTTTATCTGGATAAAGTGATGACTATCGAAACACATCAGGAATACCGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR TCA 90 bp ATTACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGCAGTCTTGTTATAGATaGACTCCAAGTTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: ITLSFISILWHTLNITGLQSCYR*TPSCSF
Trigger: GAAGGAACAACTTGGAGTTCATCTATAACAAGACTG...CAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR TCA 90 bp CTAAATCTCAGCTTGATGTCAATGATCCATGAAATTAAACCTTGGAGAATTCCTCAGTCTTGTTATAGATaGACTCCAAGTTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LNLSLMSMIHEIKPWRIPQSCYR*TPSCSF
Trigger: GAAGGAACAACTTGGAGTTCATCTATAACAAGACTG...AGGAATTCTCCAAGGTTTAATTTCATGGATCATTGACATCAAGCTGAGATTTAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR TCA 90 bp ACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAACAGTCTTGTTATAGATaGACTCCAAGTTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: TLSFISILWHTLNITGLKQSCYR*TPSCSF
Trigger: GAAGGAACAACTTGGAGTTCATCTATAACAAGACTG...TTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR TCA 90 bp TTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTTTGCAAAGATTGAGGATTTaGTGGAAAGCTGGTTGCATA +
Preference number: 4 (lower is better)
Translates to: FISILWHTLNITGLKNTLQRLRI*WKAGCI
Trigger: TATGCAACCAGCTTTCCATCAAATCCTCAATCTTTG...CAAAGTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR TCA 90 bp TTTGCACGTTACATTCTGCAAGCAAACTATATGTTTGAGCCACTCTTTGCAATTATAAAAATCCATGTTTaGGAGTTTGAAGGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: FARYILQANYMFEPLFAIIKIHV*EFEGLV
Trigger: AACCAGGCCTTCAAACTCTCAAACATGGATTTTTAT...AATTGCAAAGAGTGGCTCAAACATATAGTTTGCTTGCAGAATGTAACGTGCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR TCA 90 bp GTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACAGCAAACTATATGTTTaGGCCACTCTTTGCAATTCT +
Preference number: 4 (lower is better)
Translates to: VIYFNPVAHTEYNRLEKHSKLYV*ATLCNS
Trigger: AGAATTGCAAAGAGTGGCTCAAACATATAGTTTGCT...GTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR TCA 90 bp GTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTACATCGCATGTATGTaGTTTTGCACGTTACATTCT +
Preference number: 4 (lower is better)
Translates to: VIYFNPVAHTEYNRLEKHYIACM*FCTLHS
Trigger: AGAATGTAACGTGCAAAATCACATACATGCGATGTA...GTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR GCA 90 bp TCGCATGTATGTGATTTTGCACGTTACATTCTGCAAGCAAACTATATGTTTGAGGCCTTTGAAGCACACTaGTTTAATGCACATTTACTT +
Preference number: 4 (lower is better)
Translates to: SHVCDFARYILQANYMFEAFEAH*FNAHLL
Trigger: AAGTAAATGTGCATTAAAGCAGTGTGCTTCAAAGGC...CTCAAACATATAGTTTGCTTGCAGAATGTAACGTGCAAAATCACATACATGCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CCA 90 bp GTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACGGAATAGTTTCGAGGTaGTGCCTTTATAAATTTTCG +
Preference number: 4 (lower is better)
Translates to: VIYFNPVAHTEYNRLEKHGIVSR*CLYKFS
Trigger: CGAAAATTTATAAAGGCACCACCTCGAAACTATTCC...GTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp AACAAACAGAAGTTAAGAAAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTGGAATAGTTTCGAGGTaGTGCCTTTATAAATTTTCG +
Preference number: 4 (lower is better)
Translates to: NKQKLRKYICWGWKHCICGIVSR*CLYKFS
Trigger: CGAAAATTTATAAAGGCACCACCTCGAAACTATTCC...ACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTTCTGTTTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR CCA 90 bp TCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTCTTAGGTCTGCCTTTTaGAGGAAAATGCATGAATGT +
Preference number: 4 (lower is better)
Translates to: SFISILWHTLNITGLKNTLRSAF*RKMHEC
Trigger: ACATTCATGCATTTTCCTCCAAAAGGCAGACCTAAG...AGTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp TACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAACTTAGGTCTGCCTTTTaGAGGAAAATGCATGAATGT +
Preference number: 4 (lower is better)
Translates to: YIVIYFNPVAHTEYNRLELRSAF*RKMHEC
Trigger: ACATTCATGCATTTTCCTCCAAAAGGCAGACCTAAG...TTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR TCA 90 bp ACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAATAAAAATCCATGTTTaGGAGTTTGAAGGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: TLSFISILWHTLNITGLKIKIHV*EFEGLV
Trigger: AACCAGGCCTTCAAACTCTCAAACATGGATTTTTAT...TTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR TCA 90 bp ACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAGTAACGACTTATGTTaGGGCAGTATATTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: TLSFISILWHTLNITGLKSNDLC*GSIFCS
Trigger: AGAGCAAAATATACTGCCTCAACATAAGTCGTTACT...TTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR TCA 90 bp GTAGGTACCATTCATCCAGTTCCCTGTCCTATATACCTTTATCTAGTTATAATTAGCAAACTATATGTTTaGGCCACTCTTTGCAATTCT +
Preference number: 4 (lower is better)
Translates to: VGTIHPVPCPIYLYLVIISKLYV*ATLCNS
Trigger: AGAATTGCAAAGAGTGGCTCAAACATATAGTTTGCT...AATTATAACTAGATAAAGGTATATAGGACAGGGAACTGGATGAATGGTACCTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR TCA 90 bp TACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAATACATCGCATGTATGTaGTTTTGCACGTTACATTCT +
Preference number: 4 (lower is better)
Translates to: YIVIYFNPVAHTEYNRLEYIACM*FCTLHS
Trigger: AGAATGTAACGTGCAAAATCACATACATGCGATGTA...TTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR TCA 90 bp CTAAATCTCAGCTTGATGTCAATGATCCATGAAATTAAACCTTGGAGAATTCCTCTGCTAAGATCTATATaGAAACATTCACACTGCTTG +
Preference number: 4 (lower is better)
Translates to: LNLSLMSMIHEIKPWRIPLLRSI*KHSHCL
Trigger: CAAGCAGTGTGAATGTTTTCATATAGATCTTAGCAG...AGGAATTCTCCAAGGTTTAATTTCATGGATCATTGACATCAAGCTGAGATTTAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR GCA 90 bp GTAGGTACCATTCATCCAGTTCCCTGTCCTATATACCTTTATCTAGTTATAATTGCCTTTGAAGCACACTaGTTTAATGCACATTTACTT +
Preference number: 4 (lower is better)
Translates to: VGTIHPVPCPIYLYLVIIAFEAH*FNAHLL
Trigger: AAGTAAATGTGCATTAAAGCAGTGTGCTTCAAAGGC...AATTATAACTAGATAAAGGTATATAGGACAGGGAACTGGATGAATGGTACCTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CCA 90 bp ATTACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGGGAATAGTTTCGAGGTaGTGCCTTTATAAATTTTCG +
Preference number: 4 (lower is better)
Translates to: ITLSFISILWHTLNITGLGIVSR*CLYKFS
Trigger: CGAAAATTTATAAAGGCACCACCTCGAAACTATTCC...CAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp CTAAATCTCAGCTTGATGTCAATGATCCATGAAATTAAACCTTGGAGAATTCCTGGAATAGTTTCGAGGTaGTGCCTTTATAAATTTTCG +
Preference number: 4 (lower is better)
Translates to: LNLSLMSMIHEIKPWRIPGIVSR*CLYKFS
Trigger: CGAAAATTTATAAAGGCACCACCTCGAAACTATTCC...AGGAATTCTCCAAGGTTTAATTTCATGGATCATTGACATCAAGCTGAGATTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR CCA 90 bp ACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAGGAATAGTTTCGAGGTaGTGCCTTTATAAATTTTCG +
Preference number: 4 (lower is better)
Translates to: TLSFISILWHTLNITGLKGIVSR*CLYKFS
Trigger: CGAAAATTTATAAAGGCACCACCTCGAAACTATTCC...TTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp TTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTTTGGCAAATCCAATTCTTTaGAGGTCAAAAGTATCAGCT +
Preference number: 4 (lower is better)
Translates to: FISILWHTLNITGLKNTLANPIL*RSKVSA
Trigger: AGCTGATACTTTTGACCTCCAAAGAATTGGATTTGC...CAAAGTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp ATTACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGGCAAATCCAATTCTTTaGAGGTCAAAAGTATCAGCT +
Preference number: 4 (lower is better)
Translates to: ITLSFISILWHTLNITGLANPIL*RSKVSA
Trigger: AGCTGATACTTTTGACCTCCAAAGAATTGGATTTGC...CAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CCA 90 bp ATTACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGGATAGCCGTGGTACTTaGAACGAAATATTGAAAGTA +
Preference number: 4 (lower is better)
Translates to: ITLSFISILWHTLNITGLDSRGT*NEILKV
Trigger: TACTTTCAATATTTCGTTCCAAGTACCACGGCTATC...CAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000515859.5
CDS-3UTR CCA 90 bp TTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTTTGGATTTGATGGAAAGCTaGTTGCATAAAACACATGAG +
Preference number: 4 (lower is better)
Translates to: FISILWHTLNITGLKNTLDLMES*LHKTHE
Trigger: CTCATGTGTTTTATGCAACCAGCTTTCCATCAAATC...CAAAGTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CCA 90 bp TCGGTATTCCTGATGTGTTTCGATAGTCATCACTTTATCCAGATAAAGTATACTCATGAAATTAAACCTTaGAGAATTCCTGCCATACAA +
Preference number: 4 (lower is better)
Translates to: SVFLMCFDSHHFIQIKYTHEIKP*RIPAIQ
Trigger: TTGTATGGCAGGAATTCTCCAAGGTTTAATTTCATG...AGTATACTTTATCTGGATAAAGTGATGACTATCGAAACACATCAGGAATACCGA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS CCA 90 bp ACCGCGCACCACGCCTGCCCGGCCAGCCTCCGGGAGCCCGCTGGCTaGGCCCTCCGGGATGGCAGCGGCTTTGCGAGGGACCCGGGCCGC +
Preference number: 5 (lower is better)
Translates to: TAHHACPASLREPAG*ALRDGSGFARDPGR
Trigger: GCGGCCCGGGTCCCTCGCAAAGCCGCTGCCATCCCGGAGGGCCCAGCCAGCGGGCTCCCGGAGGCTGGCCGGGCAGGCGTGGTGCGCGGT
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000509380.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CAA 90 bp AGAAGGAGCTCTAGTCCTTGGTTAGGCATCCAAATTGTAGGTACCATTCATCCAGGGATGGCAGCGGCTTaGCGAGGGACCCGGGCCGCG +
Preference number: 5 (lower is better)
Translates to: RRSSSPWLGIQIVGTIHPGMAAA*RGTRAA
Trigger: CGCGGCCCGGGTCCCTCGCAAAGCCGCTGCCATCCC...TGGATGAATGGTACCTACAATTTGGATGCCTAACCAAGGACTAGAGCTCCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CAA 90 bp TCATCCTTCAGCTCGGTATTCCTGATGTGTTTCGATAGTCATCACTTTATCCAGGGGATGGCAGCGGCTTaGCGAGGGACCCGGGCCGCG +
Preference number: 5 (lower is better)
Translates to: SSFSSVFLMCFDSHHFIQGMAAA*RGTRAA
Trigger: CGCGGCCCGGGTCCCTCGCAAAGCCGCTGCCATCCC...CTGGATAAAGTGATGACTATCGAAACACATCAGGAATACCGAGCTGAAGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR CAA 90 bp TCGCATGTATGTGATTTTGCACGTTACATTCTGCAAGCAAACTATATGTTTGAGGGGATGGCAGCGGCTTaGCGAGGGACCCGGGCCGCG +
Preference number: 5 (lower is better)
Translates to: SHVCDFARYILQANYMFEGMAAA*RGTRAA
Trigger: CGCGGCCCGGGTCCCTCGCAAAGCCGCTGCCATCCC...CTCAAACATATAGTTTGCTTGCAGAATGTAACGTGCAAAATCACATACATGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS TCA 90 bp GCCATTGTACTCCAGCATTTCTGCAGGCTATGCAGGAAGCATGGCTaGGGAGGCCTCAGGAAACTTACGATCATGCATGAAGCCGAAGAG +
Preference number: 5 (lower is better)
Translates to: AIVLQHFCRLCRKHG*GGLRKLTIMHEAEE
Trigger: CTCTTCGGCTTCATGCATGATCGTAAGTTTCCTGAGGCCTCCTCAGCCATGCTTCCTGCATAGCCTGCAGAAATGCTGGAGTACAATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503191.5
CDS-3UTR CAA 90 bp TACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAGGGATGGCAGCGGCTTaGCGAGGGACCCGGGCCGCG +
Preference number: 5 (lower is better)
Translates to: YIVIYFNPVAHTEYNRLEGMAAA*RGTRAA
Trigger: CGCGGCCCGGGTCCCTCGCAAAGCCGCTGCCATCCC...TTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CAA 90 bp TCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTGGGATGGCAGCGGCTTaGCGAGGGACCCGGGCCGCG +
Preference number: 5 (lower is better)
Translates to: SFISILWHTLNITGLKNTGMAAA*RGTRAA
Trigger: CGCGGCCCGGGTCCCTCGCAAAGCCGCTGCCATCCC...AGTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS CCA 90 bp TCAGCAATCCACTTTGCTAGTTGCTCAGCTGCAAATCCAATTCTTTaGAGGTCAAAAGTATCAGCTCTCTTAGGTCTGCCTTTTGGAGGA +
Preference number: 5 (lower is better)
Translates to: SAIHFASCSAANPIL*RSKVSALLGLPFGG
Trigger: TCCTCCAAAAGGCAGACCTAAGAGAGCTGATACTTTTGACCTCCAAAGAATTGGATTTGCAGCTGAGCAACTAGCAAAGTGGATTGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000382020.8
ENST00000503191.5
ENST00000503731.6
ENST00000506802.5
ENST00000507400.1
ENST00000509380.5
ENST00000510836.5
ENST00000511783.2
ENST00000515859.5
CDS-3UTR CAA 90 bp ACTAGGCAAATTATCCGTCTTTTTCCAACATCGCCTTTCGAAGTTGCTGCTTCACATTCATTCGGAAGATaGAGCGTCTGGAACTCCATT +
Preference number: 5 (lower is better)
Translates to: TRQIIRLFPTSPFEVAASHSFGR*SVWNSI
Trigger: AATGGAGTTCCAGACGCTCAATCTTCCGAATGAATG...TGAAGCAGCAACTTCGAAAGGCGATGTTGGAAAAAGACGGATAATTTGCCTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515859.5
CDS-3UTR CAA 90 bp AGTAGAAAACTGAAGAAGAAGACCACCAGGCCCAATCCCACTAGGCAAATTATCATATTCTTCATTAGCTaGCCTGCACACAGAACACTG +
Preference number: 5 (lower is better)
Translates to: SRKLKKKTTRPNPTRQIIIFFIS*PAHRTL
Trigger: CAGTGTTCTGTGTGCAGGCAAGCTAATGAAGAATAT...GATAATTTGCCTAGTGGGATTGGGCCTGGTGGTCTTCTTCTTCAGTTTTCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515859.5
CDS-3UTR CAA 90 bp AGAAGGAGCTCTAGTCCTTGGTTAGGCATCCAAATTGTAGGTACCATTCATCCACATCGCCTTTCGAAGTaGCTGCTTCATTTAGAAGAA +
Preference number: 5 (lower is better)
Translates to: RRSSSPWLGIQIVGTIHPHRLSK*LLHLEE
Trigger: TTCTTCTAAATGAAGCAGCAACTTCGAAAGGCGATG...TGGATGAATGGTACCTACAATTTGGATGCCTAACCAAGGACTAGAGCTCCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CAA 90 bp AGTAGAAAACTGAAGAAGAAGACCACCAGGCCCAATCCCACTAGGCAAATTATCCATCGCCTTTCGAAGTaGCTGCTTCATTTAGAAGAA +
Preference number: 5 (lower is better)
Translates to: SRKLKKKTTRPNPTRQIIHRLSK*LLHLEE
Trigger: TTCTTCTAAATGAAGCAGCAACTTCGAAAGGCGATG...GATAATTTGCCTAGTGGGATTGGGCCTGGTGGTCTTCTTCTTCAGTTTTCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515859.5
CDS-3UTR CAA 90 bp AGAAGGAGCTCTAGTCCTTGGTTAGGCATCCAAATTGTAGGTACCATTCATCCACGCATGTATGTGATTTaGCACGTTACATTCTGCAAG +
Preference number: 5 (lower is better)
Translates to: RRSSSPWLGIQIVGTIHPRMYVI*HVTFCK
Trigger: CTTGCAGAATGTAACGTGCAAAATCACATACATGCG...TGGATGAATGGTACCTACAATTTGGATGCCTAACCAAGGACTAGAGCTCCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CAA 90 bp AAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAAATGATTAACTCCACGCATTCATTCGGAAGATaGAGCGTCTGGAACTCCATT +
Preference number: 5 (lower is better)
Translates to: KYICWGWKHCICQMINSTHSFGR*SVWNSI
Trigger: AATGGAGTTCCAGACGCTCAATCTTCCGAATGAATG...CGTGGAGTTAATCATTTGACAGATGCAATGCTTCCACCCCCAACAAATATACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR CAA 90 bp CTCAATGGTTGTACACCCGTTTCTTGTTTGAGGCTATATAGCTGGAACTCCCAATGCAAATCCAATTCTTaGGAGGTCAAAAGTATCAGC +
Preference number: 5 (lower is better)
Translates to: LNGCTPVSCLRLYSWNSQCKSNS*EVKSIS
Trigger: GCTGATACTTTTGACCTCCAAAGAATTGGATTTGCA...TTGGGAGTTCCAGCTATATAGCCTCAAACAAGAAACGGGTGTACAACCATTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CAA 90 bp TTCAGCTCGGTATTCCTGATGTGTTTCGATAGTCATCACTTTATCCAGATAAAGTGTCAGCAATCCACTTaGCTAGTTGCTCAGCTGCAA +
Preference number: 5 (lower is better)
Translates to: FSSVFLMCFDSHHFIQIKCQQST*LVAQLQ
Trigger: TTGCAGCTGAGCAACTAGCAAAGTGGATTGCTGACA...CTTTATCTGGATAAAGTGATGACTATCGAAACACATCAGGAATACCGAGCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR CAA 90 bp CTCAATGGTTGTACACCCGTTTCTTGTTTGAGGCTATATAGCTGGAACTCCCAATTGATGGAAAGCTGGTaGCATAAAACACATGAGCAA +
Preference number: 5 (lower is better)
Translates to: LNGCTPVSCLRLYSWNSQLMESW*HKTHEQ
Trigger: TTGCTCATGTGTTTTATGCAACCAGCTTTCCATCAA...TTGGGAGTTCCAGCTATATAGCCTCAAACAAGAAACGGGTGTACAACCATTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CAA 90 bp TTCAGCTCGGTATTCCTGATGTGTTTCGATAGTCATCACTTTATCCAGATAAAGCATTCATTCGGAAGATaGAGCGTCTGGAACTCCATT +
Preference number: 5 (lower is better)
Translates to: FSSVFLMCFDSHHFIQIKHSFGR*SVWNSI
Trigger: AATGGAGTTCCAGACGCTCAATCTTCCGAATGAATG...CTTTATCTGGATAAAGTGATGACTATCGAAACACATCAGGAATACCGAGCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR CAA 90 bp AAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAAATGATTAACTCCACGATATTCTTCATTAGCTaGCCTGCACACAGAACACTG +
Preference number: 5 (lower is better)
Translates to: KYICWGWKHCICQMINSTIFFIS*PAHRTL
Trigger: CAGTGTTCTGTGTGCAGGCAAGCTAATGAAGAATAT...CGTGGAGTTAATCATTTGACAGATGCAATGCTTCCACCCCCAACAAATATACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR CAA 90 bp ACTAGGCAAATTATCCGTCTTTTTCCAACATCGCCTTTCGAAGTTGCTGCTTCAGGAGTTCGCCAGTATTaGATATTCTTCATTAGCTTG +
Preference number: 5 (lower is better)
Translates to: TRQIIRLFPTSPFEVAASGVRQY*IFFISL
Trigger: CAAGCTAATGAAGAATATCAAATACTGGCGAACTCC...TGAAGCAGCAACTTCGAAAGGCGATGTTGGAAAAAGACGGATAATTTGCCTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515859.5
CDS-3UTR CAA 90 bp TCATCCTTCAGCTCGGTATTCCTGATGTGTTTCGATAGTCATCACTTTATCCAGTGCAAATCCAATTCTTaGGAGGTCAAAAGTATCAGC +
Preference number: 5 (lower is better)
Translates to: SSFSSVFLMCFDSHHFIQCKSNS*EVKSIS
Trigger: GCTGATACTTTTGACCTCCAAAGAATTGGATTTGCA...CTGGATAAAGTGATGACTATCGAAACACATCAGGAATACCGAGCTGAAGGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR CAA 90 bp ACTAGGCAAATTATCCGTCTTTTTCCAACATCGCCTTTCGAAGTTGCTGCTTCATGCAAATCCAATTCTTaGGAGGTCAAAAGTATCAGC +
Preference number: 5 (lower is better)
Translates to: TRQIIRLFPTSPFEVAASCKSNS*EVKSIS
Trigger: GCTGATACTTTTGACCTCCAAAGAATTGGATTTGCA...TGAAGCAGCAACTTCGAAAGGCGATGTTGGAAAAAGACGGATAATTTGCCTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515859.5
CDS-3UTR CAA 90 bp TCGCATGTATGTGATTTTGCACGTTACATTCTGCAAGCAAACTATATGTTTGAGTGTCAGCAATCCACTTaGCTAGTTGCTCAGCTGCAA +
Preference number: 5 (lower is better)
Translates to: SHVCDFARYILQANYMFECQQST*LVAQLQ
Trigger: TTGCAGCTGAGCAACTAGCAAAGTGGATTGCTGACA...CTCAAACATATAGTTTGCTTGCAGAATGTAACGTGCAAAATCACATACATGCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CAA 90 bp GTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTGTCAGCAATCCACTTaGCTAGTTGCTCAGCTGCAA +
Preference number: 5 (lower is better)
Translates to: VIYFNPVAHTEYNRLEKHCQQST*LVAQLQ
Trigger: TTGCAGCTGAGCAACTAGCAAAGTGGATTGCTGACA...GTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CAA 90 bp AACAAACAGAAGTTAAGAAAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTTGTCAGCAATCCACTTaGCTAGTTGCTCAGCTGCAA +
Preference number: 5 (lower is better)
Translates to: NKQKLRKYICWGWKHCICCQQST*LVAQLQ
Trigger: TTGCAGCTGAGCAACTAGCAAAGTGGATTGCTGACA...ACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTTCTGTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR CAA 90 bp AAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAAATGATTAACTCCACGATGAATGTAGCTCACTaGTCCATTGTGTGGGTTCTT +
Preference number: 5 (lower is better)
Translates to: KYICWGWKHCICQMINSTMNVAH*SIVWVL
Trigger: AAGAACCCACACAATGGACAAGTGAGCTACATTCAT...CGTGGAGTTAATCATTTGACAGATGCAATGCTTCCACCCCCAACAAATATACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR CAA 90 bp AAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAAATGATTAACTCCACGCATCGCCTTTCGAAGTaGCTGCTTCATTTAGAAGAA +
Preference number: 5 (lower is better)
Translates to: KYICWGWKHCICQMINSTHRLSK*LLHLEE
Trigger: TTCTTCTAAATGAAGCAGCAACTTCGAAAGGCGATG...CGTGGAGTTAATCATTTGACAGATGCAATGCTTCCACCCCCAACAAATATACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR CAA 90 bp GTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACCCTAGTTGTGGTATGTaGCTTTCATCGTCTGATGCC +
Preference number: 5 (lower is better)
Translates to: VIYFNPVAHTEYNRLEKHPSCGM*LSSSDA
Trigger: GGCATCAGACGATGAAAGCAACATACCACAACTAGG...GTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS TCA 90 bp TGCCTTTATAAATTTTCGGAATTTATCACCATTCATTCGGAAGATTaGGCGTCTGGAACTCCATTCCATCAGCTGCTCTACTTTTTCAGC +
Preference number: 5 (lower is better)
Translates to: CLYKFSEFITIHSED*ASGTPFHQLLYFFS
Trigger: GCTGAAAAAGTAGAGCAGCTGATGGAATGGAGTTCCAGACGCTCAATCTTCCGAATGAATGGTGATAAATTCCGAAAATTTATAAAGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000382020.8
ENST00000503191.5
ENST00000503731.6
ENST00000506802.5
ENST00000507400.1
ENST00000509177.1
ENST00000509380.5
ENST00000510836.5
ENST00000511783.2
ENST00000515859.5
CDS-3UTR CAA 90 bp ATTCTGCAAGCAAACTATATGTTTGAGCCACTCTTTGCAATTCTGCCTATAGCAATATTCTTCATTAGCTaGCCTGCACACAGAACACTG +
Preference number: 5 (lower is better)
Translates to: ILQANYMFEPLFAILPIAIFFIS*PAHRTL
Trigger: CAGTGTTCTGTGTGCAGGCAAGCTAATGAAGAATAT...TGCTATAGGCAGAATTGCAAAGAGTGGCTCAAACATATAGTTTGCTTGCAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CAA 90 bp TTCAGCTCGGTATTCCTGATGTGTTTCGATAGTCATCACTTTATCCAGATAAAGATATTCTTCATTAGCTaGCCTGCACACAGAACACTG +
Preference number: 5 (lower is better)
Translates to: FSSVFLMCFDSHHFIQIKIFFIS*PAHRTL
Trigger: CAGTGTTCTGTGTGCAGGCAAGCTAATGAAGAATAT...CTTTATCTGGATAAAGTGATGACTATCGAAACACATCAGGAATACCGAGCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR CAA 90 bp TGCAATTCTGCCTATAGCATTTTCCAGTCAGTAACGACTTATGTTGAGGCAGTAGGAGTTCGCCAGTATTaGATATTCTTCATTAGCTTG +
Preference number: 5 (lower is better)
Translates to: CNSAYSIFQSVTTYVEAVGVRQY*IFFISL
Trigger: CAAGCTAATGAAGAATATCAAATACTGGCGAACTCC...TACTGCCTCAACATAAGTCGTTACTGACTGGAAAATGCTATAGGCAGAATTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CAA 90 bp GTAGGTACCATTCATCCAGTTCCCTGTCCTATATACCTTTATCTAGTTATAATTTGTCAGCAATCCACTTaGCTAGTTGCTCAGCTGCAA +
Preference number: 5 (lower is better)
Translates to: VGTIHPVPCPIYLYLVIICQQST*LVAQLQ
Trigger: TTGCAGCTGAGCAACTAGCAAAGTGGATTGCTGACA...AATTATAACTAGATAAAGGTATATAGGACAGGGAACTGGATGAATGGTACCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CAA 90 bp TTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTTTGTGTCAGCAATCCACTTaGCTAGTTGCTCAGCTGCAA +
Preference number: 5 (lower is better)
Translates to: FISILWHTLNITGLKNTLCQQST*LVAQLQ
Trigger: TTGCAGCTGAGCAACTAGCAAAGTGGATTGCTGACA...CAAAGTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CAA 90 bp GTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACACACCCGTTTCTTGTTaGAGGCTATATAGCTGGAAC +
Preference number: 5 (lower is better)
Translates to: VIYFNPVAHTEYNRLEKHTPVSC*RLYSWN
Trigger: GTTCCAGCTATATAGCCTCAAACAAGAAACGGGTGT...GTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CAA 90 bp TTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTTTGCATTCATTCGGAAGATaGAGCGTCTGGAACTCCATT +
Preference number: 5 (lower is better)
Translates to: FISILWHTLNITGLKNTLHSFGR*SVWNSI
Trigger: AATGGAGTTCCAGACGCTCAATCTTCCGAATGAATG...CAAAGTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CAA 90 bp ATTACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGCATTCATTCGGAAGATaGAGCGTCTGGAACTCCATT +
Preference number: 5 (lower is better)
Translates to: ITLSFISILWHTLNITGLHSFGR*SVWNSI
Trigger: AATGGAGTTCCAGACGCTCAATCTTCCGAATGAATG...CAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CAA 90 bp TACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAACATTCATTCGGAAGATaGAGCGTCTGGAACTCCATT +
Preference number: 5 (lower is better)
Translates to: YIVIYFNPVAHTEYNRLEHSFGR*SVWNSI
Trigger: AATGGAGTTCCAGACGCTCAATCTTCCGAATGAATG...TTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CAA 90 bp GCAAATCCCACTTGGCTTCATTTAATTAAAAAGTCCGTCTTTTTCCAACATCGCGGAGTTCGCCAGTATTaGATATTCTTCATTAGCTTG +
Preference number: 5 (lower is better)
Translates to: ANPTWLHLIKKSVFFQHRGVRQY*IFFISL
Trigger: CAAGCTAATGAAGAATATCAAATACTGGCGAACTCC...GCGATGTTGGAAAAAGACGGACTTTTTAATTAAATGAAGCCAAGTGGGATTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000510836.5
CDS-3UTR CAA 90 bp GCAAATCCCACTTGGCTTCATTTAATTAAAAAGTCCGTCTTTTTCCAACATCGCTGCAAATCCAATTCTTaGGAGGTCAAAAGTATCAGC +
Preference number: 5 (lower is better)
Translates to: ANPTWLHLIKKSVFFQHRCKSNS*EVKSIS
Trigger: GCTGATACTTTTGACCTCCAAAGAATTGGATTTGCA...GCGATGTTGGAAAAAGACGGACTTTTTAATTAAATGAAGCCAAGTGGGATTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000510836.5
CDS-3UTR CAA 90 bp TTTGCACGTTACATTCTGCAAGCAAACTATATGTTTGAGCCACTCTTTGCAATTATGAATGTAGCTCACTaGTCCATTGTGTGGGTTCTT +
Preference number: 5 (lower is better)
Translates to: FARYILQANYMFEPLFAIMNVAH*SIVWVL
Trigger: AAGAACCCACACAATGGACAAGTGAGCTACATTCAT...AATTGCAAAGAGTGGCTCAAACATATAGTTTGCTTGCAGAATGTAACGTGCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CAA 90 bp TTTGCACGTTACATTCTGCAAGCAAACTATATGTTTGAGCCACTCTTTGCAATTCATCGCCTTTCGAAGTaGCTGCTTCATTTAGAAGAA +
Preference number: 5 (lower is better)
Translates to: FARYILQANYMFEPLFAIHRLSK*LLHLEE
Trigger: TTCTTCTAAATGAAGCAGCAACTTCGAAAGGCGATG...AATTGCAAAGAGTGGCTCAAACATATAGTTTGCTTGCAGAATGTAACGTGCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CAA 90 bp ACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAACATCGTCTGATGCCTTaGAAGCACACTGCTTTAATG +
Preference number: 5 (lower is better)
Translates to: TLSFISILWHTLNITGLKHRLMP*KHTALM
Trigger: CATTAAAGCAGTGTGCTTCAAAGGCATCAGACGATG...TTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CAA 90 bp ATTACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGACACCCGTTTCTTGTTaGAGGCTATATAGCTGGAAC +
Preference number: 5 (lower is better)
Translates to: ITLSFISILWHTLNITGLTPVSC*RLYSWN
Trigger: GTTCCAGCTATATAGCCTCAAACAAGAAACGGGTGT...CAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CAA 90 bp CAGAAGTTAAGAAAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAAATGGTTAAGAAAGTATATTaGTTGGGGGTGGAAGCATTG +
Preference number: 5 (lower is better)
Translates to: QKLRKYICWGWKHCICQMVKKVY*LGVEAL
Trigger: CAATGCTTCCACCCCCAACAAATATACTTTCTTAAC...CATTTGACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR CAA 90 bp GTAGGTACCATTCATCCAGTTCCCTGTCCTATATACCTTTATCTAGTTATAATTATATTCTTCATTAGCTaGCCTGCACACAGAACACTG +
Preference number: 5 (lower is better)
Translates to: VGTIHPVPCPIYLYLVIIIFFIS*PAHRTL
Trigger: CAGTGTTCTGTGTGCAGGCAAGCTAATGAAGAATAT...AATTATAACTAGATAAAGGTATATAGGACAGGGAACTGGATGAATGGTACCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CAA 90 bp TACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAATATTCTTCATTAGCTaGCCTGCACACAGAACACTG +
Preference number: 5 (lower is better)
Translates to: YIVIYFNPVAHTEYNRLEIFFIS*PAHRTL
Trigger: CAGTGTTCTGTGTGCAGGCAAGCTAATGAAGAATAT...TTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CAA 90 bp ATTACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGATATTCTTCATTAGCTaGCCTGCACACAGAACACTG +
Preference number: 5 (lower is better)
Translates to: ITLSFISILWHTLNITGLIFFIS*PAHRTL
Trigger: CAGTGTTCTGTGTGCAGGCAAGCTAATGAAGAATAT...CAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CAA 90 bp GTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACGGAGTTCGCCAGTATTaGATATTCTTCATTAGCTTG +
Preference number: 5 (lower is better)
Translates to: VIYFNPVAHTEYNRLEKHGVRQY*IFFISL
Trigger: CAAGCTAATGAAGAATATCAAATACTGGCGAACTCC...GTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CAA 90 bp AAACAGAAGTTAAGAAAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAAGGAGTTCGCCAGTATTaGATATTCTTCATTAGCTTG +
Preference number: 5 (lower is better)
Translates to: KQKLRKYICWGWKHCICQGVRQY*IFFISL
Trigger: CAAGCTAATGAAGAATATCAAATACTGGCGAACTCC...TTGACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTTCTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR CAA 90 bp AAACAGAAGTTAAGAAAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAATGCAAATCCAATTCTTaGGAGGTCAAAAGTATCAGC +
Preference number: 5 (lower is better)
Translates to: KQKLRKYICWGWKHCICQCKSNS*EVKSIS
Trigger: GCTGATACTTTTGACCTCCAAAGAATTGGATTTGCA...TTGACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTTCTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR CAA 90 bp TTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTTTGATGAATGTAGCTCACTaGTCCATTGTGTGGGTTCTT +
Preference number: 5 (lower is better)
Translates to: FISILWHTLNITGLKNTLMNVAH*SIVWVL
Trigger: AAGAACCCACACAATGGACAAGTGAGCTACATTCAT...CAAAGTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
CDS-3UTR CAA 90 bp TACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAATGAATGTAGCTCACTaGTCCATTGTGTGGGTTCTT +
Preference number: 5 (lower is better)
Translates to: YIVIYFNPVAHTEYNRLEMNVAH*SIVWVL
Trigger: AAGAACCCACACAATGGACAAGTGAGCTACATTCAT...TTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
CDS-3UTR CAA 90 bp TCGGTATTCCTGATGTGTTTCGATAGTCATCACTTTATCCAGATAAAGTATACTATGAATGTAGCTCACTaGTCCATTGTGTGGGTTCTT +
Preference number: 5 (lower is better)
Translates to: SVFLMCFDSHHFIQIKYTMNVAH*SIVWVL
Trigger: AAGAACCCACACAATGGACAAGTGAGCTACATTCAT...AGTATACTTTATCTGGATAAAGTGATGACTATCGAAACACATCAGGAATACCGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR CAA 90 bp TACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAACATCGCCTTTCGAAGTaGCTGCTTCATTTAGAAGAA +
Preference number: 5 (lower is better)
Translates to: YIVIYFNPVAHTEYNRLEHRLSK*LLHLEE
Trigger: TTCTTCTAAATGAAGCAGCAACTTCGAAAGGCGATG...TTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CAA 90 bp TTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTTTGCATCGCCTTTCGAAGTaGCTGCTTCATTTAGAAGAA +
Preference number: 5 (lower is better)
Translates to: FISILWHTLNITGLKNTLHRLSK*LLHLEE
Trigger: TTCTTCTAAATGAAGCAGCAACTTCGAAAGGCGATG...CAAAGTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CAA 90 bp ACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAACGCATGTATGTGATTTaGCACGTTACATTCTGCAAG +
Preference number: 5 (lower is better)
Translates to: TLSFISILWHTLNITGLKRMYVI*HVTFCK
Trigger: CTTGCAGAATGTAACGTGCAAAATCACATACATGCG...TTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CAA 90 bp ATTCTGCAAGCAAACTATATGTTTGAGCCACTCTTTGCAATTCTGCCTATAGCAAATTTTTATGACAGTTaGGAACGCACAGTGAATCTG +
Preference number: 5 (lower is better)
Translates to: ILQANYMFEPLFAILPIANFYDS*ERTVNL
Trigger: CAGATTCACTGTGCGTTCCAAACTGTCATAAAAATT...TGCTATAGGCAGAATTGCAAAGAGTGGCTCAAACATATAGTTTGCTTGCAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CAA 90 bp ACAGAAGTTAAGAAAGTATATTTGTTGGGGGTGGAAGCATTGCATCTGTCAAATAAGAAAGTATATTTGTaGGGGGTGGAAGCATTGCAT +
Preference number: 5 (lower is better)
Translates to: TEVKKVYLLGVEALHLSNKKVYL*GVEALH
Trigger: ATGCAATGCTTCCACCCCCAACAAATATACTTTCTT...ATTTGACAGATGCAATGCTTCCACCCCCAACAAATATACTTTCTTAACTTCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000511783.2
CDS-3UTR CAA 90 bp TACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAGGAGTTCGCCAGTATTaGATATTCTTCATTAGCTTG +
Preference number: 5 (lower is better)
Translates to: YIVIYFNPVAHTEYNRLEGVRQY*IFFISL
Trigger: CAAGCTAATGAAGAATATCAAATACTGGCGAACTCC...TTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CAA 90 bp TCGGTATTCCTGATGTGTTTCGATAGTCATCACTTTATCCAGATAAAGTATACTGGAGTTCGCCAGTATTaGATATTCTTCATTAGCTTG +
Preference number: 5 (lower is better)
Translates to: SVFLMCFDSHHFIQIKYTGVRQY*IFFISL
Trigger: CAAGCTAATGAAGAATATCAAATACTGGCGAACTCC...AGTATACTTTATCTGGATAAAGTGATGACTATCGAAACACATCAGGAATACCGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509380.5
CDS-3UTR CAA 90 bp TTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAACACTTTGTGCAAATCCAATTCTTaGGAGGTCAAAAGTATCAGC +
Preference number: 5 (lower is better)
Translates to: FISILWHTLNITGLKNTLCKSNS*EVKSIS
Trigger: GCTGATACTTTTGACCTCCAAAGAATTGGATTTGCA...CAAAGTGTTTTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CAA 90 bp ATTACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGTGCAAATCCAATTCTTaGGAGGTCAAAAGTATCAGC +
Preference number: 5 (lower is better)
Translates to: ITLSFISILWHTLNITGLCKSNS*EVKSIS
Trigger: GCTGATACTTTTGACCTCCAAAGAATTGGATTTGCA...CAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000510836.5
ENST00000515859.5
CDS-3UTR CAA 90 bp TACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAATTGATGGAAAGCTGGTaGCATAAAACACATGAGCAA +
Preference number: 5 (lower is better)
Translates to: YIVIYFNPVAHTEYNRLELMESW*HKTHEQ
Trigger: TTGCTCATGTGTTTTATGCAACCAGCTTTCCATCAA...TTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS-3UTR CAA 90 bp ACATTGTCATTTATTTCAATCCTGTGGCACACACTGAATATAACAGGCTTGAAAAATTTTTATGACAGTTaGGAACGCACAGTGAATCTG +
Preference number: 5 (lower is better)
Translates to: TLSFISILWHTLNITGLKNFYDS*ERTVNL
Trigger: CAGATTCACTGTGCGTTCCAAACTGTCATAAAAATT...TTTCAAGCCTGTTATATTCAGTGTGTGCCACAGGATTGAAATAAATGACAATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000382020.8
ENST00000503731.6
CDS GCA 72 bp GCCCGCTGGCTGGGCCCTCCGGGATGGCAGCGGCTTTaGGAGGGACCCGGGCCGCGGCCGAGGACGCAGAGG +
Preference number: 6 (lower is better)
Translates to: ARWLGPPGWQRL*EGPGPRPRTQR
Trigger: CCTCTGCGTCCTCGGCCGCGGCCCGGGTCCCTCGCAAAGCCGCTGCCATCCCGGAGGGCCCAGCCAGCGGGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000515859.5
CDS CCA 72 bp CACGCCTGCCCGGCCAGCCTCCGGGAGCCCGCTGGCTaGGCCCTCCGGGATGGCAGCGGCTTTGCGAGGGAC +
Preference number: 6 (lower is better)
Translates to: HACPASLREPAG*ALRDGSGFARD
Trigger: GTCCCTCGCAAAGCCGCTGCCATCCCGGAGGGCCCAGCCAGCGGGCTCCCGGAGGCTGGCCGGGCAGGCGTG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000509380.5
ENST00000510836.5
ENST00000515859.5
CDS CCA 72 bp GCACCACGCCTGCCCGGCCAGCCTCCGGGAGCCCGCTaGCTGGGCCCTCCGGGATGGCAGCGGCTTTGCGAG +
Preference number: 6 (lower is better)
Translates to: APRLPGQPPGAR*LGPPGWQRLCE
Trigger: CTCGCAAAGCCGCTGCCATCCCGGAGGGCCCAGCCAGCGGGCTCCCGGAGGCTGGCCGGGCAGGCGTGGTGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000509380.5
ENST00000510836.5
ENST00000515859.5
CDS CAA 90 bp GCCTCCGGGAGCCCGCTGGCTGGGCCCTCCGGGATGGCAGCGGCTTaGCGAGGGACCCGGGCCGCGGCCGAGGACGCAGAGGAGGAGACT +
Preference number: 6 (lower is better)
Translates to: ASGSPLAGPSGMAAA*RGTRAAAEDAEEET
Trigger: AGTCTCCTCCTCTGCGTCCTCGGCCGCGGCCCGGGTCCCTCGCAAAGCCGCTGCCATCCCGGAGGGCCCAGCCAGCGGGCTCCCGGAGGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000515859.5
CDS TCA 72 bp CTCCAGCATTTCTGCAGGCTATGCAGGAAGCATGGCTaGGGAGGCCTCAGGAAACTTACGATCATGCATGAA +
Preference number: 6 (lower is better)
Translates to: LQHFCRLCRKHG*GGLRKLTIMHE
Trigger: TTCATGCATGATCGTAAGTTTCCTGAGGCCTCCTCAGCCATGCTTCCTGCATAGCCTGCAGAAATGCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503191.5
CDS CCA 72 bp GCTGCTCCCATGAATGTAGCTCACTTGTCCATTGTGTaGGTTCTTATGAGCATATGGAGGTCCACGGATATG +
Preference number: 6 (lower is better)
Translates to: AAPMNVAHLSIV*VLMSIWRSTDM
Trigger: CATATCCGTGGACCTCCATATGCTCATAAGAACCCACACAATGGACAAGTGAGCTACATTCATGGGAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382020.8
ENST00000503731.6
ENST00000506802.5
ENST00000509380.5
ENST00000511783.2
CDS CCA 72 bp CACTTTGCTAGTTGCTCAGCTGCAAATCCAATTCTTTaGAGGTCAAAAGTATCAGCTCTCTTAGGTCTGCCT +
Preference number: 6 (lower is better)
Translates to: HFASCSAANPIL*RSKVSALLGLP
Trigger: AGGCAGACCTAAGAGAGCTGATACTTTTGACCTCCAAAGAATTGGATTTGCAGCTGAGCAACTAGCAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000382020.8
ENST00000503191.5
ENST00000503731.6
ENST00000506802.5
ENST00000507400.1
ENST00000509380.5
ENST00000510836.5
ENST00000511783.2
ENST00000515859.5
CDS CAA 72 bp CCCGAATATGAACATCCGTTCTGTCAGCAATCCACTTaGCTAGTTGCTCAGCTGCAAATCCAATTCTTTGGA +
Preference number: 6 (lower is better)
Translates to: PEYEHPFCQQST*LVAQLQIQFFG
Trigger: TCCAAAGAATTGGATTTGCAGCTGAGCAACTAGCAAAGTGGATTGCTGACAGAACGGATGTTCATATTCGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000382020.8
ENST00000503191.5
ENST00000503731.6
ENST00000506802.5
ENST00000507400.1
ENST00000509380.5
ENST00000510836.5
ENST00000511783.2
ENST00000515859.5
CDS CCA 72 bp GGAATTTATCACCATTCATTCGGAAGATTGAGCGTCTaGAACTCCATTCCATCAGCTGCTCTACTTTTTCAG +
Preference number: 6 (lower is better)
Translates to: GIYHHSFGRLSV*NSIPSAALLFQ
Trigger: CTGAAAAAGTAGAGCAGCTGATGGAATGGAGTTCCAGACGCTCAATCTTCCGAATGAATGGTGATAAATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000382020.8
ENST00000503191.5
ENST00000503731.6
ENST00000506802.5
ENST00000507400.1
ENST00000509177.1
ENST00000509380.5
ENST00000510836.5
ENST00000511783.2
ENST00000515859.5
CDS CCA 72 bp CAATGTTCCAGAATGGTTAAACACTTGTCCATTGTGTaGGTTCTTATGAGCATATGGAGGTCCACGGATATG +
Preference number: 6 (lower is better)
Translates to: QCSRMVKHLSIV*VLMSIWRSTDM
Trigger: CATATCCGTGGACCTCCATATGCTCATAAGAACCCACACAATGGACAAGTGTTTAACCATTCTGGAACATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508446.1
CDS TCA 72 bp AAATTTTCGGAATTTATCACCATTCATTCGGAAGATTaGGCGTCTGGAACTCCATTCCATCAGCTGCTCTAC +
Preference number: 6 (lower is better)
Translates to: KFSEFITIHSED*ASGTPFHQLLY
Trigger: GTAGAGCAGCTGATGGAATGGAGTTCCAGACGCTCAATCTTCCGAATGAATGGTGATAAATTCCGAAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000382020.8
ENST00000503191.5
ENST00000503731.6
ENST00000506802.5
ENST00000507400.1
ENST00000509177.1
ENST00000509380.5
ENST00000510836.5
ENST00000511783.2
ENST00000515859.5
CDS TCA 72 bp ACAGAGACACCATGGCCCAACCAGTCTTGTTATAGATaGACTCCAAGTTGTTCCTTCTCAAATAAAGCAAAC +
Preference number: 6 (lower is better)
Translates to: TETPWPNQSCYR*TPSCSFSNKAN
Trigger: GTTTGCTTTATTTGAGAAGGAACAACTTGGAGTTCATCTATAACAAGACTGGTTGGGCCATGGTGTCTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000382020.8
ENST00000503191.5
ENST00000503731.6
ENST00000506802.5
ENST00000507400.1
ENST00000509380.5
ENST00000510836.5
ENST00000511783.2
ENST00000515859.5