Pregenerated sensors for TUFM (Homo sapiens)
Ensembl gene IDs: ENSG00000178952Ensembl transcript IDs: ENST00000313511.8
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCCGAGGAAACAAGATGGGTTTGGCACCTGAGCTGAAGCCATGCTaGCTCCAGAGCGATAGAACATTCTTTCCCACTATCTCCCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: FRGNKMGLAPELKPC*LQSDRTFFPTISQE Trigger: CTCCTGGGAGATAGTGGGAAAGAATGTTCTATCGCTCTGGAGCCAGCATGGCTTCAGCTCAGGTGCCAAACCCATCTTGTTTCCTCGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| 3UTR GCA 90 bp | GTATTCCGAGGAAACAAGATGGGTTTGGCACCTGAGCTGAAGCCATaGTGGCTCCAGAGCGATAGAACATTCTTTCCCACTATCTCCCAG | + |
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Preference number: 1 (lower is better) Translates to: VFRGNKMGLAPELKP*WLQSDRTFFPTISQ Trigger: CTGGGAGATAGTGGGAAAGAATGTTCTATCGCTCTGGAGCCAGCATGGCTTCAGCTCAGGTGCCAAACCCATCTTGTTTCCTCGGAATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| 3UTR TCA 90 bp | GTGACCTGCTTTATTGTGGTAGTCTGGAAGCAAACCTACAGCATCTaGGGTATGCCTGTCCAGTCCCTGTTCCCACAGAATGTGAATGGA | + |
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Preference number: 1 (lower is better) Translates to: VTCFIVVVWKQTYSI*GMPVQSLFPQNVNG Trigger: TCCATTCACATTCTGTGGGAACAGGGACTGGACAGGCATACCTCAGATGCTGTAGGTTTGCTTCCAGACTACCACAATAAAGCAGGTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| 3UTR CCA 90 bp | CATCTGAGGTATGCCTGTCCAGTCCCTGTTCCCACAGAATGTGAATaGATGCTAGACATTCACTTAGTATTCCGAGGAAACAAGATGGGT | + |
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Preference number: 1 (lower is better) Translates to: HLRYACPVPVPTECE*MLDIHLVFRGNKMG Trigger: ACCCATCTTGTTTCCTCGGAATACTAAGTGAATGTCTAGCATCCATTCACATTCTGTGGGAACAGGGACTGGACAGGCATACCTCAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| 3UTR TCA 90 bp | ACAGCATCTGAGGTATGCCTGTCCAGTCCCTGTTCCCACAGAATGTaGATGGATGCTAGACATTCACTTAGTATTCCGAGGAAACAAGAT | + |
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Preference number: 1 (lower is better) Translates to: TASEVCLSSPCSHRM*MDARHSLSIPRKQD Trigger: ATCTTGTTTCCTCGGAATACTAAGTGAATGTCTAGCATCCATTCACATTCTGTGGGAACAGGGACTGGACAGGCATACCTCAGATGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| 3UTR CAA 90 bp | TGGATGCTAGACATTCACTTAGTATTCCGAGGAAACAAGATGGGTTaGGCACCTGAGCTGAAGCCATGCTGGCTCCAGAGCGATAGAACA | + |
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Preference number: 2 (lower is better) Translates to: WMLDIHLVFRGNKMG*APELKPCWLQSDRT Trigger: TGTTCTATCGCTCTGGAGCCAGCATGGCTTCAGCTCAGGTGCCAAACCCATCTTGTTTCCTCGGAATACTAAGTGAATGTCTAGCATCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| 3UTR-3UTR TCA 90 bp | ACTAAGCTCACTGGACTTGATTTATCCGTTAAAACTGCTCTGGGATCTCACAAGCTATTCAAAGTTTACTaGCCTCCCCAGCCAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: TKLTGLDLSVKTALGSHKLFKVY*PPQPGR Trigger: CCTGCCTGGCTGGGGAGGTCAGTAAACTTTGAATAG...CTTGTGAGATCCCAGAGCAGTTTTAACGGATAAATCAAGTCCAGTGAGCTTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| 3UTR-3UTR TCA 90 bp | TGGATGCTAGACATTCACTTAGTATTCCGAGGAAACAAGATGGGTTTGGCACCTTATCTCCCAGGAGGCTaGATAACGGCATCCTACTGT | + |
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Preference number: 2 (lower is better) Translates to: WMLDIHLVFRGNKMGLAPYLPGG*ITASYC Trigger: ACAGTAGGATGCCGTTATTCAGCCTCCTGGGAGATA...AGGTGCCAAACCCATCTTGTTTCCTCGGAATACTAAGTGAATGTCTAGCATCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| 3UTR-3UTR GCA 90 bp | TATGCCTGTCCAGTCCCTGTTCCCACAGAATGTGAATGGATGCTAGACATTCACCTATCCTCTCCAATTTaGACAAAGGACACAGGACAC | + |
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Preference number: 2 (lower is better) Translates to: YACPVPVPTECEWMLDIHLSSPI*TKDTGH Trigger: GTGTCCTGTGTCCTTTGTGCAAATTGGAGAGGATAG...GTGAATGTCTAGCATCCATTCACATTCTGTGGGAACAGGGACTGGACAGGCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCATCTGAGGTATGCCTGTCCAGTCCCTGTTCCCACAGAATGTGAATGGATGACACAGGACACAGGCTaGCTTACTATTCAAAGTTTA | + |
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Preference number: 2 (lower is better) Translates to: QHLRYACPVPVPTECEWMTQDTG*LTIQSL Trigger: TAAACTTTGAATAGTAAGCCAGCCTGTGTCCTGTGT...CATCCATTCACATTCTGTGGGAACAGGGACTGGACAGGCATACCTCAGATGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| 3UTR GCA 72 bp | GGAAACAAGATGGGTTTGGCACCTGAGCTGAAGCCATaGTGGCTCCAGAGCGATAGAACATTCTTTCCCACT | + |
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Preference number: 3 (lower is better) Translates to: GNKMGLAPELKP*WLQSDRTFFPT Trigger: AGTGGGAAAGAATGTTCTATCGCTCTGGAGCCAGCATGGCTTCAGCTCAGGTGCCAAACCCATCTTGTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| 3UTR-3UTR CAA 90 bp | GCGATAGAACATTCTTTCCCACTATCTCCCAGGAGGCTGAATAACGGCATCCTAGGTTCAACACCCTTTTaGTCCTCCCCTATCCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: AIEHSFPLSPRRLNNGILGSTPF*SSPILS Trigger: GGAGAGGATAGGGGAGGACAAAAAGGGTGTTGAACC...TAGGATGCCGTTATTCAGCCTCCTGGGAGATAGTGGGAAAGAATGTTCTATCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| 3UTR CCA 72 bp | AACAAGATGGGTTTGGCACCTGAGCTGAAGCCATGCTaGCTCCAGAGCGATAGAACATTCTTTCCCACTATC | + |
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Preference number: 3 (lower is better) Translates to: NKMGLAPELKPC*LQSDRTFFPTI Trigger: GATAGTGGGAAAGAATGTTCTATCGCTCTGGAGCCAGCATGGCTTCAGCTCAGGTGCCAAACCCATCTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| 3UTR TCA 72 bp | GAGGTATGCCTGTCCAGTCCCTGTTCCCACAGAATGTaGATGGATGCTAGACATTCACTTAGTATTCCGAGG | + |
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Preference number: 3 (lower is better) Translates to: EVCLSSPCSHRM*MDARHSLSIPR Trigger: CCTCGGAATACTAAGTGAATGTCTAGCATCCATTCACATTCTGTGGGAACAGGGACTGGACAGGCATACCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| 3UTR GCA 72 bp | CAACACCCTTTTTGTCCTCCCCTATCCTCTCCAATTTaGACAAAGGACACAGGACACAGGCTGGCTTACTAT | + |
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Preference number: 3 (lower is better) Translates to: QHPFCPPLSSPI*TKDTGHRLAYY Trigger: ATAGTAAGCCAGCCTGTGTCCTGTGTCCTTTGTGCAAATTGGAGAGGATAGGGGAGGACAAAAAGGGTGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| 3UTR TCA 72 bp | TTTATTGTGGTAGTCTGGAAGCAAACCTACAGCATCTaGGGTATGCCTGTCCAGTCCCTGTTCCCACAGAAT | + |
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Preference number: 3 (lower is better) Translates to: FIVVVWKQTYSI*GMPVQSLFPQN Trigger: ATTCTGTGGGAACAGGGACTGGACAGGCATACCTCAGATGCTGTAGGTTTGCTTCCAGACTACCACAATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| 3UTR CCA 72 bp | TATGCCTGTCCAGTCCCTGTTCCCACAGAATGTGAATaGATGCTAGACATTCACTTAGTATTCCGAGGAAAC | + |
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Preference number: 3 (lower is better) Translates to: YACPVPVPTECE*MLDIHLVFRGN Trigger: GTTTCCTCGGAATACTAAGTGAATGTCTAGCATCCATTCACATTCTGTGGGAACAGGGACTGGACAGGCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| CDS-3UTR TCA 90 bp | CATTCTTTCCCACTATCTCCCAGGAGGCTGAATAACGGCATCCTACTGTGTCTACGGCGGCGAGACCGCTaGAGTGGGGCGTCGCGCGCA | + |
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Preference number: 4 (lower is better) Translates to: HSFPLSPRRLNNGILLCLRRRDR*SGASRA Trigger: TGCGCGCGACGCCCCACTTCAGCGGTCTCGCCGCCG...TAGACACAGTAGGATGCCGTTATTCAGCCTCCTGGGAGATAGTGGGAAAGAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| CDS-3UTR GCA 90 bp | CATTCTTTCCCACTATCTCCCAGGAGGCTGAATAACGGCATCCTACTGTGTCTATACCTGTCACCACGGTaGCACGGCCAGGGACGGAGT | + |
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Preference number: 4 (lower is better) Translates to: HSFPLSPRRLNNGILLCLYLSPR*HGQGRS Trigger: ACTCCGTCCCTGGCCGTGGCACCGTGGTGACAGGTA...TAGACACAGTAGGATGCCGTTATTCAGCCTCCTGGGAGATAGTGGGAAAGAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| CDS-3UTR GCA 90 bp | TGGATGCTAGACATTCACTTAGTATTCCGAGGAAACAAGATGGGTTTGGCACCTAGCCGCAACAGACCCTaGAGCAGGAAGGTCCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: WMLDIHLVFRGNKMGLAPSRNRP*SRKVRP Trigger: CGGCCGGACCTTCCTGCTGCAGGGTCTGTTGCGGCT...AGGTGCCAAACCCATCTTGTTTCCTCGGAATACTAAGTGAATGTCTAGCATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| CDS-3UTR TCA 90 bp | TTTTTGTCCTCCCCTATCCTCTCCAATTTGCACAAAGGACACAGGACACAGGCTGATGGGTTTGGCACCTaGGCTGAAGCCATGCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: FLSSPILSNLHKGHRTQADGFGT*AEAMLA Trigger: AGCCAGCATGGCTTCAGCTCAGGTGCCAAACCCATC...AGCCTGTGTCCTGTGTCCTTTGTGCAAATTGGAGAGGATAGGGGAGGACAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| CDS-3UTR CCA 90 bp | TTTTTGTCCTCCCCTATCCTCTCCAATTTGCACAAAGGACACAGGACACAGGCTTGGCTGCAGTCAGCGTaGTCTTCCCGTGGTCCACAT | + |
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Preference number: 4 (lower is better) Translates to: FLSSPILSNLHKGHRTQAWLQSA*SSRGPH Trigger: ATGTGGACCACGGGAAGACCACGCTGACTGCAGCCA...AGCCTGTGTCCTGTGTCCTTTGTGCAAATTGGAGAGGATAGGGGAGGACAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| CDS-3UTR GCA 90 bp | TGGATGCTAGACATTCACTTAGTATTCCGAGGAAACAAGATGGGTTTGGCACCTGCACAAGAGAGGCAATaGCGGGGCTTTCAGCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: WMLDIHLVFRGNKMGLAPAQERQ*RGFQQP Trigger: CGGCTGCTGAAAGCCCCGGCATTGCCTCTCTTGTGC...AGGTGCCAAACCCATCTTGTTTCCTCGGAATACTAAGTGAATGTCTAGCATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| CDS-3UTR GCA 90 bp | TCCAGAGCGATAGAACATTCTTTCCCACTATCTCCCAGGAGGCTGAATAACGGCAATCTTCGTGATGGCTaGAGTCAGCGTGGTCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: SRAIEHSFPLSPRRLNNGNLRDG*SQRGLP Trigger: GGGAAGACCACGCTGACTGCAGCCATCACGAAGATT...GCCGTTATTCAGCCTCCTGGGAGATAGTGGGAAAGAATGTTCTATCGCTCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| CDS-3UTR GCA 90 bp | TCCAGAGCGATAGAACATTCTTTCCCACTATCTCCCAGGAGGCTGAATAACGGCACAGCATCTGAGGTATaGCTGTCCAGTCCCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: SRAIEHSFPLSPRRLNNGTASEV*LSSPCS Trigger: GGAACAGGGACTGGACAGGCATACCTCAGATGCTGT...GCCGTTATTCAGCCTCCTGGGAGATAGTGGGAAAGAATGTTCTATCGCTCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| CDS-3UTR CCA 90 bp | CAGCATCTGAGGTATGCCTGTCCAGTCCCTGTTCCCACAGAATGTGAATGGATGCCGTTAAAACTGCTCTaGGATCTCACAAGCTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: QHLRYACPVPVPTECEWMPLKLL*DLTSSP Trigger: TGGGGAGCTTGTGAGATCCCAGAGCAGTTTTAACGG...CATCCATTCACATTCTGTGGGAACAGGGACTGGACAGGCATACCTCAGATGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| 3UTR CAA 72 bp | GACATTCACTTAGTATTCCGAGGAAACAAGATGGGTTaGGCACCTGAGCTGAAGCCATGCTGGCTCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: DIHLVFRGNKMG*APELKPCWLQS Trigger: GCTCTGGAGCCAGCATGGCTTCAGCTCAGGTGCCAAACCCATCTTGTTTCCTCGGAATACTAAGTGAATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| CDS-3UTR TCA 90 bp | TTTTTGTCCTCCCCTATCCTCTCCAATTTGCACAAAGGACACAGGACACAGGCTCTATTCAAAGTTTACTaGCCTCCCCAGCCAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: FLSSPILSNLHKGHRTQALFKVY*PPQPGR Trigger: CCTGCCTGGCTGGGGAGGTCAGTAAACTTTGAATAG...AGCCTGTGTCCTGTGTCCTTTGTGCAAATTGGAGAGGATAGGGGAGGACAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| CDS-3UTR GCA 90 bp | TCCAGAGCGATAGAACATTCTTTCCCACTATCTCCCAGGAGGCTGAATAACGGCTGCCTGTCACCACAGTaGGGATGTTCTTGCTATGTC | + |
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Preference number: 4 (lower is better) Translates to: SRAIEHSFPLSPRRLNNGCLSPQ*GCSCYV Trigger: GACATAGCAAGAACATCCGCACTGTGGTGACAGGCA...GCCGTTATTCAGCCTCCTGGGAGATAGTGGGAAAGAATGTTCTATCGCTCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| CDS-3UTR GCA 90 bp | CCTTTTTGTCCTCCCCTATCCTCTCCAATTTGCACAAAGGACACAGGACACAGGTGTGGAACATCTCAATaGCTGTCACCACAGTGCGGA | + |
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Preference number: 4 (lower is better) Translates to: PFCPPLSSPICTKDTGHRCGTSQ*LSPQCG Trigger: TCCGCACTGTGGTGACAGGCATTGAGATGTTCCACA...CCTGTGTCCTGTGTCCTTTGTGCAAATTGGAGAGGATAGGGGAGGACAAAAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| CDS-3UTR CCA 90 bp | TTTTTGTCCTCCCCTATCCTCTCCAATTTGCACAAAGGACACAGGACACAGGCTAGCTCCCCATCTGTCTaGGGTTCAACACCCTTTTTG | + |
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Preference number: 4 (lower is better) Translates to: FLSSPILSNLHKGHRTQASSPSV*GSTPFL Trigger: CAAAAAGGGTGTTGAACCCCAGACAGATGGGGAGCT...AGCCTGTGTCCTGTGTCCTTTGTGCAAATTGGAGAGGATAGGGGAGGACAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| 3UTR CAA 72 bp | TCAACACCCTTTTTGTCCTCCCCTATCCTCTCCAATTaGCACAAAGGACACAGGACACAGGCTGGCTTACTA | + |
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Preference number: 4 (lower is better) Translates to: STPFLSSPILSN*HKGHRTQAGLL Trigger: TAGTAAGCCAGCCTGTGTCCTGTGTCCTTTGTGCAAATTGGAGAGGATAGGGGAGGACAAAAAGGGTGTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| CDS-3UTR TCA 90 bp | GCAAACCTACAGCATCTGAGGTATGCCTGTCCAGTCCCTGTTCCCACAGAATGTTGTTCCCACAGAATGTaGATGGATGCTAGACATTCA | + |
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Preference number: 4 (lower is better) Translates to: ANLQHLRYACPVPVPTECCSHRM*MDARHS Trigger: TGAATGTCTAGCATCCATTCACATTCTGTGGGAACA...ACATTCTGTGGGAACAGGGACTGGACAGGCATACCTCAGATGCTGTAGGTTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| CDS-3UTR TCA 90 bp | GAATGTGAATGGATGCTAGACATTCACTTAGTATTCCGAGGAAACAAGATGGGTCAGCTAGAATCTTCGTaGTGGCTGCAGTCAGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: ECEWMLDIHLVFRGNKMGQLESS*WLQSAW Trigger: CCACGCTGACTGCAGCCATCACGAAGATTCTAGCTG...ACCCATCTTGTTTCCTCGGAATACTAAGTGAATGTCTAGCATCCATTCACATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| CDS-3UTR CCA 90 bp | GCAAACCTACAGCATCTGAGGTATGCCTGTCCAGTCCCTGTTCCCACAGAATGTTTTATTGTGGTAGTCTaGAAGCAAACCTACAGCATC | + |
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Preference number: 4 (lower is better) Translates to: ANLQHLRYACPVPVPTECFIVVV*KQTYSI Trigger: GATGCTGTAGGTTTGCTTCCAGACTACCACAATAAA...ACATTCTGTGGGAACAGGGACTGGACAGGCATACCTCAGATGCTGTAGGTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| CDS-3UTR CCA 90 bp | TATGCCTGTCCAGTCCCTGTTCCCACAGAATGTGAATGGATGCTAGACATTCACACACAGGACACAGGCTaGCTTACTATTCAAAGTTTA | + |
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Preference number: 4 (lower is better) Translates to: YACPVPVPTECEWMLDIHTQDTG*LTIQSL Trigger: TAAACTTTGAATAGTAAGCCAGCCTGTGTCCTGTGT...GTGAATGTCTAGCATCCATTCACATTCTGTGGGAACAGGGACTGGACAGGCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| 3UTR CAA 72 bp | CCTACTGTGTCTAGGCAATCACTAAGCTCACTGGACTaGATTTATCCGTTAAAACTGCTCTGGGATCTCACA | + |
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Preference number: 4 (lower is better) Translates to: PTVSRQSLSSLD*IYPLKLLWDLT Trigger: TGTGAGATCCCAGAGCAGTTTTAACGGATAAATCAAGTCCAGTGAGCTTAGTGATTGCCTAGACACAGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| CDS-3UTR CAA 90 bp | CCTTTTTGTCCTCCCCTATCCTCTCCAATTTGCACAAAGGACACAGGACACAGGGTGCCAATAGTCCGGTaGCCATCTCGCAGGGTGAAA | + |
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Preference number: 5 (lower is better) Translates to: PFCPPLSSPICTKDTGHRVPIVR*PSRRVK Trigger: TTTCACCCTGCGAGATGGCAACCGGACTATTGGCAC...CCTGTGTCCTGTGTCCTTTGTGCAAATTGGAGAGGATAGGGGAGGACAAAAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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| CDS-3UTR CAA 90 bp | CATTCTTTCCCACTATCTCCCAGGAGGCTGAATAACGGCATCCTACTGTGTCTAGGTTCAACACCCTTTTaGTCCTCCCCTATCCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: HSFPLSPRRLNNGILLCLGSTPF*SSPILS Trigger: GGAGAGGATAGGGGAGGACAAAAAGGGTGTTGAACC...TAGACACAGTAGGATGCCGTTATTCAGCCTCCTGGGAGATAGTGGGAAAGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313511.8 |
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