RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TUBGCP6 (Homo sapiens)

Ensembl gene IDs: ENSG00000128159

Ensembl transcript IDs: ENST00000248846.10, ENST00000425018.1, ENST00000434349.1, ENST00000439308.6, ENST00000473946.1, ENST00000489511.5, ENST00000491449.5, ENST00000498611.5

Found 404 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGCCCCTGAAGACGGCCTTGTGCAGGTACTCTGCGTGCGCACGCTaGATCTCCTCCAGGTCGCCCACGGTGGCCAACCTGGCCCTGAAC +
Preference number: 1 (lower is better)
Translates to: RPLKTALCRYSACAR*ISSRSPTVANLALN
Trigger: GTTCAGGGCCAGGTTGGCCACCGTGGGCGACCTGGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCCGTCTTCAGGGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR GCA 90 bp AGGGAGAGGTTGGAGGCGTGCGGGGTGTCCCCATGCAGGCTGCACTaGAGGGCCTTGCTCAGCACAGAGTTCAGCACCAGCGGGTTGAGC +
Preference number: 1 (lower is better)
Translates to: RERLEACGVSPCRLH*RALLSTEFSTSGLS
Trigger: GCTCAACCCGCTGGTGCTGAACTCTGTGCTGAGCAAGGCCCTGCAGTGCAGCCTGCATGGGGACACCCCGCACGCCTCCAACCTCTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR GCA 90 bp TACTTGAGAGCGAGGGAGAGGTTGGAGGCGTGCGGGGTGTCCCCATaGAGGCTGCACTGCAGGGCCTTGCTCAGCACAGAGTTCAGCACC +
Preference number: 1 (lower is better)
Translates to: YLRARERLEACGVSP*RLHCRALLSTEFST
Trigger: GGTGCTGAACTCTGTGCTGAGCAAGGCCCTGCAGTGCAGCCTGCATGGGGACACCCCGCACGCCTCCAACCTCTCCCTCGCTCTCAAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR GCA 90 bp GGACTGGGCGAACTCGCCGTCCTCCATCAGCAGGAAGTGCCGCAGTaGCTCATAGTGCGCCTCCAGGTGCAGCTCCACGAAGAAGTAGTC +
Preference number: 1 (lower is better)
Translates to: GLGELAVLHQQEVPQ*LIVRLQVQLHEEVV
Trigger: GACTACTTCTTCGTGGAGCTGCACCTGGAGGCGCACTATGAGGCACTGCGGCACTTCCTGCTGATGGAGGACGGCGAGTTCGCCCAGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR CCA 90 bp GTTTGCCCAGCTCCAAGCTTCTCAAAGAGCAGGTCGCTGAGGGACTaGGCGAACTCGCCGTCCTCCATCAGCAGGAAGTGCCGCAGTGCC +
Preference number: 1 (lower is better)
Translates to: VCPAPSFSKSRSLRD*ANSPSSISRKCRSA
Trigger: GGCACTGCGGCACTTCCTGCTGATGGAGGACGGCGAGTTCGCCCAGTCCCTCAGCGACCTGCTCTTTGAGAAGCTTGGAGCTGGGCAAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR TCA 90 bp TGCACTGCAGGGCCTTGCTCAGCACAGAGTTCAGCACCAGCGGGTTaGGCAGCTCTCCGGGCGTTTGCCCAGCTCCAAGCTTCTCAAAGA +
Preference number: 1 (lower is better)
Translates to: CTAGPCSAQSSAPAG*AALRAFAQLQASQR
Trigger: TCTTTGAGAAGCTTGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAACTCTGTGCTGAGCAAGGCCCTGCAGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR GCA 90 bp AGGTGGAAGCAGACGTCCTTGAGCGCCCACATCATGAGCTTCAGCTaGAGCAGGAAGGAGAAGACGCCGCTGTACTTGCTCACGCAGCCC +
Preference number: 1 (lower is better)
Translates to: RWKQTSLSAHIMSFS*SRKEKTPLYLLTQP
Trigger: GGGCTGCGTGAGCAAGTACAGCGGCGTCTTCTCCTTCCTGCTGCAGCTGAAGCTCATGATGTGGGCGCTCAAGGACGTCTGCTTCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR-3UTR GCA 90 bp CCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCTCGGGCAGGTACTGTGGGCGGCCAGCGGTaGCGTGATGGAGCGCTTCAT +
Preference number: 2 (lower is better)
Translates to: PGSSAHPGRWGQTPRAGTVGGQR*RDGALH
Trigger: ATGAAGCGCTCCATCACGGCACCGCTGGCCGCCCAC...AGTACCTGCCCGAGGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR-3UTR TCA 90 bp GGCCTTGTGCAGGTACTCTGCGTGCGCACGCTGGATCTCCTCCAGGTCGCCCACCAAAGAGCAGGTCGCTaGGGGACTGGGCGAACTCGC +
Preference number: 2 (lower is better)
Translates to: GLVQVLCVRTLDLLQVAHQRAGR*GTGRTR
Trigger: GCGAGTTCGCCCAGTCCCTCAGCGACCTGCTCTTTG...GTGGGCGACCTGGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR-3UTR GCA 90 bp GGCCTTGTGCAGGTACTCTGCGTGCGCACGCTGGATCTCCTCCAGGTCGCCCACCAGGAAGTGCCGCAGTaGCTCATAGTGCGCCTCCAG +
Preference number: 2 (lower is better)
Translates to: GLVQVLCVRTLDLLQVAHQEVPQ*LIVRLQ
Trigger: CTGGAGGCGCACTATGAGGCACTGCGGCACTTCCTG...GTGGGCGACCTGGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR-3UTR CCA 90 bp ACAGAGTTCAGCACCAGCGGGTTGAGCAGCTCTCCGGGCGTTTGCCCAGCTCCAAGGTCGCTGAGGGACTaGGCGAACTCGCCGTCCTCC +
Preference number: 2 (lower is better)
Translates to: TEFSTSGLSSSPGVCPAPRSLRD*ANSPSS
Trigger: GGAGGACGGCGAGTTCGCCCAGTCCCTCAGCGACCT...TGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAACTCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR-3UTR GCA 90 bp AACTTGAGCACGAGGCTGAAGATGCTGTGGATGACGTTCATGACGGGCGCCGCCTGCGGGGTGTCCCCATaGAGGCTGCACTGCAGGGCC +
Preference number: 2 (lower is better)
Translates to: NLSTRLKMLWMTFMTGAACGVSP*RLHCRA
Trigger: GGCCCTGCAGTGCAGCCTGCATGGGGACACCCCGCA...GGCGGCGCCCGTCATGAACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR CAA 90 bp CTGCACTGCAGGGCCTTGCTCAGCACAGAGTTCAGCACCAGCGGGTaGAGCAGCTCTCCGGGCGTTTGCCCAGCTCCAAGCTTCTCAAAG +
Preference number: 2 (lower is better)
Translates to: LHCRALLSTEFSTSG*SSSPGVCPAPSFSK
Trigger: CTTTGAGAAGCTTGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAACTCTGTGCTGAGCAAGGCCCTGCAGTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR-3UTR TCA 90 bp ACCTTTATTGTGCACGTCCCCCGCAGAGCAGCCTCAGGCGTCCTGGTAGTAGTTTCAGCACCAGCGGGTTaGGCAGCTCTCCGGGCGTTT +
Preference number: 2 (lower is better)
Translates to: TFIVHVPRRAASGVLVVVSAPAG*AALRAF
Trigger: AAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGA...AACTACTACCAGGACGCCTGAGGCTGCTCTGCGGGGGACGTGCACAATAAAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR-3UTR CCA 90 bp AAGACGCCGCTGTACTTGCTCACGCAGCCCTCGGTGATGACAATGTTGAGAGGCTTCACCAAGGAGATGTaGGCGGCCAGCGGTGCCGTG +
Preference number: 2 (lower is better)
Translates to: KTPLYLLTQPSVMTMLRGFTKEM*AASGAV
Trigger: CACGGCACCGCTGGCCGCCCACATCTCCTTGGTGAA...GCCTCTCAACATTGTCATCACCGAGGGCTGCGTGAGCAAGTACAGCGGCGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR-3UTR TCA 90 bp GATGAGCTGGCTGCGGAACTTGAGCACGAGGCTGAAGATGCTGTGGATGACGTTGCAGGGCTGTGCGCTTaGGGTGGAAGCAGACGTCCT +
Preference number: 2 (lower is better)
Translates to: DELAAELEHEAEDAVDDVAGLCA*GGSRRP
Trigger: AGGACGTCTGCTTCCACCTCAAGCGCACAGCCCTGC...AACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTTCCGCAGCCAGCTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR-3UTR TCA 90 bp CACCTTTATTGTGCACGTCCCCCGCAGAGCAGCCTCAGGCGTCCTGGTAGTAGTGCTGCATCTCGTGCTTaGACAGCTGCAGCTGACGGA +
Preference number: 2 (lower is better)
Translates to: HLYCARPPQSSLRRPGSSAASRA*TAAADG
Trigger: TCCGTCAGCTGCAGCTGTTCAAGCACGAGATGCAGC...ACTACTACCAGGACGCCTGAGGCTGCTCTGCGGGGGACGTGCACAATAAAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR-3UTR GCA 90 bp GTTCAGCACCAGCGGGTTGAGCAGCTCTCCGGGCGTTTGCCCAGCTCCAAGCTTAGAACACCTTTATTGTaGACGTCCCCCGCAGAGCAG +
Preference number: 2 (lower is better)
Translates to: VQHQRVEQLSGRLPSSKLRTPLL*TSPAEQ
Trigger: CTGCTCTGCGGGGGACGTGCACAATAAAGGTGTTCT...AAGCTTGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR-3UTR GCA 90 bp AGGTGGAAGCAGACGTCCTTGAGCGCCCACATCATGAGCTTCAGCTGCAGCAGGAGCTCTCCGGGCGTTTaGCCAGCTCCAAGCTTCTCA +
Preference number: 2 (lower is better)
Translates to: RWKQTSLSAHIMSFSCSRSSPGV*PAPSFS
Trigger: TGAGAAGCTTGGAGCTGGGCAAACGCCCGGAGAGCT...CCTGCTGCAGCTGAAGCTCATGATGTGGGCGCTCAAGGACGTCTGCTTCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR-3UTR GCA 90 bp GAGCTGGCTGCGGAACTTGAGCACGAGGCTGAAGATGCTGTGGATGACGTTCATTGCAGGTACTCTGCGTaGGCACGCTGGATCTCCTCC +
Preference number: 2 (lower is better)
Translates to: ELAAELEHEAEDAVDDVHCRYSA*ARWISS
Trigger: GGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCA...ATGAACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTTCCGCAGCCAGCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR CAA 90 bp ATCATGAGCTTCAGCTGCAGCAGGAAGGAGAAGACGCCGCTGTACTaGCTCACGCAGCCCTCGGTGATGACAATGTTGAGAGGCCAGTCC +
Preference number: 2 (lower is better)
Translates to: IMSFSCSRKEKTPLY*LTQPSVMTMLRGQS
Trigger: GGACTGGCCTCTCAACATTGTCATCACCGAGGGCTGCGTGAGCAAGTACAGCGGCGTCTTCTCCTTCCTGCTGCAGCTGAAGCTCATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR-3UTR GCA 90 bp GACGTCCTTGAGCGCCCACATCATGAGCTTCAGCTGCAGCAGGAAGGAGAAGACTGCACTGCAGGGCCTTaGTCAGCACAGAGTTCAGCA +
Preference number: 2 (lower is better)
Translates to: DVLERPHHELQLQQEGEDCTAGP*SAQSSA
Trigger: TGCTGAACTCTGTGCTGAGCAAGGCCCTGCAGTGCA...GTCTTCTCCTTCCTGCTGCAGCTGAAGCTCATGATGTGGGCGCTCAAGGACGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR-3UTR GCA 90 bp AGCTGGCTGCGGAACTTGAGCACGAGGCTGAAGATGCTGTGGATGACGTTCATGACCTTCACGAAATGCTaGATCTCGTGCTTGAACAGC +
Preference number: 2 (lower is better)
Translates to: SWLRNLSTRLKMLWMTFMTFTKC*ISCLNS
Trigger: GCTGTTCAAGCACGAGATGCAGCATTTCGTGAAGGT...CATGAACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTTCCGCAGCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR GCA 72 bp GCGAGGGAGAGGTTGGAGGCGTGCGGGGTGTCCCCATaGAGGCTGCACTGCAGGGCCTTGCTCAGCACAGAG +
Preference number: 3 (lower is better)
Translates to: ARERLEACGVSP*RLHCRALLSTE
Trigger: CTCTGTGCTGAGCAAGGCCCTGCAGTGCAGCCTGCATGGGGACACCCCGCACGCCTCCAACCTCTCCCTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR GCA 72 bp GGCCTTGTTCACCAAGGAGATGTGGGCGGCCAGCGGTaGCGTGATGGAGCGCTTCATGAGCACGGGCAGCGT +
Preference number: 3 (lower is better)
Translates to: GLVHQGDVGGQR*RDGALHEHGQR
Trigger: ACGCTGCCCGTGCTCATGAAGCGCTCCATCACGGCACCGCTGGCCGCCCACATCTCCTTGGTGAACAAGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR CCA 72 bp AAGACGGCCTTGTGCAGGTACTCTGCGTGCGCACGCTaGATCTCCTCCAGGTCGCCCACGGTGGCCAACCTG +
Preference number: 3 (lower is better)
Translates to: KTALCRYSACAR*ISSRSPTVANL
Trigger: CAGGTTGGCCACCGTGGGCGACCTGGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCCGTCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR-3UTR CAA 90 bp CTCCTCCAGGTCGCCCACGGTGGCCAACCTGGCCCTGAACTCGCACCAGGTGACTGGAAGCAGACGTCCTaGAGCGCCCACATCATGAGC +
Preference number: 3 (lower is better)
Translates to: LLQVAHGGQPGPELAPGDWKQTS*SAHIMS
Trigger: GCTCATGATGTGGGCGCTCAAGGACGTCTGCTTCCA...GTCACCTGGTGCGAGTTCAGGGCCAGGTTGGCCACCGTGGGCGACCTGGAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR TCA 72 bp GGGCCTTGCTCAGCACAGAGTTCAGCACCAGCGGGTTaGGCAGCTCTCCGGGCGTTTGCCCAGCTCCAAGCT +
Preference number: 3 (lower is better)
Translates to: GPCSAQSSAPAG*AALRAFAQLQA
Trigger: AGCTTGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAACTCTGTGCTGAGCAAGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR-3UTR CAA 90 bp CTGCGGAACTTGAGCACGAGGCTGAAGATGCTGTGGATGACGTTCATGACGGGCAGAGCGAGGGAGAGGTaGGAGGCGTGCGGGGTGTCC +
Preference number: 3 (lower is better)
Translates to: LRNLSTRLKMLWMTFMTGRARER*EACGVS
Trigger: GGACACCCCGCACGCCTCCAACCTCTCCCTCGCTCT...GCCCGTCATGAACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTTCCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR GCA 72 bp GAACTCGCCGTCCTCCATCAGCAGGAAGTGCCGCAGTaGCTCATAGTGCGCCTCCAGGTGCAGCTCCACGAA +
Preference number: 3 (lower is better)
Translates to: ELAVLHQQEVPQ*LIVRLQVQLHE
Trigger: TTCGTGGAGCTGCACCTGGAGGCGCACTATGAGGCACTGCGGCACTTCCTGCTGATGGAGGACGGCGAGTTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR-3UTR CAA 90 bp AGGTGGAAGCAGACGTCCTTGAGCGCCCACATCATGAGCTTCAGCTGCAGCAGGAAGACGCCGCTGTACTaGCTCACGCAGCCCTCGGTG +
Preference number: 3 (lower is better)
Translates to: RWKQTSLSAHIMSFSCSRKTPLY*LTQPSV
Trigger: CACCGAGGGCTGCGTGAGCAAGTACAGCGGCGTCTT...CCTGCTGCAGCTGAAGCTCATGATGTGGGCGCTCAAGGACGTCTGCTTCCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR GCA 72 bp TTCAGCACCAGCGGGTTGAGCAGCTCTCCGGGCGTTTaGCCAGCTCCAAGCTTCTCAAAGAGCAGGTCGCTG +
Preference number: 3 (lower is better)
Translates to: FSTSGLSSSPGV*PAPSFSKSRSL
Trigger: CAGCGACCTGCTCTTTGAGAAGCTTGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR CCA 72 bp GCTCCAAGCTTCTCAAAGAGCAGGTCGCTGAGGGACTaGGCGAACTCGCCGTCCTCCATCAGCAGGAAGTGC +
Preference number: 3 (lower is better)
Translates to: APSFSKSRSLRD*ANSPSSISRKC
Trigger: GCACTTCCTGCTGATGGAGGACGGCGAGTTCGCCCAGTCCCTCAGCGACCTGCTCTTTGAGAAGCTTGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR-3UTR CAA 90 bp AGCAGGAAGGAGAAGACGCCGCTGTACTTGCTCACGCAGCCCTCGGTGATGACACTGCACTGCAGGGCCTaGCTCAGCACAGAGTTCAGC +
Preference number: 3 (lower is better)
Translates to: SRKEKTPLYLLTQPSVMTLHCRA*LSTEFS
Trigger: GCTGAACTCTGTGCTGAGCAAGGCCCTGCAGTGCAG...TGTCATCACCGAGGGCTGCGTGAGCAAGTACAGCGGCGTCTTCTCCTTCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR TCA 72 bp TTTGCCCAGCTCCAAGCTTCTCAAAGAGCAGGTCGCTaGGGGACTGGGCGAACTCGCCGTCCTCCATCAGCA +
Preference number: 3 (lower is better)
Translates to: FAQLQASQRAGR*GTGRTRRPPSA
Trigger: TGCTGATGGAGGACGGCGAGTTCGCCCAGTCCCTCAGCGACCTGCTCTTTGAGAAGCTTGGAGCTGGGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR GCA 72 bp GTAGTACTTGAAGGTGTTGTAGGACTGCTGCATGAGTaGAAAGTTGGGGTGCTCTGCACCCCGCGGGCCCCC +
Preference number: 3 (lower is better)
Translates to: VVLEGVVGLLHE*KVGVLCTPRAP
Trigger: GGGGGCCCGCGGGGTGCAGAGCACCCCAACTTTGCACTCATGCAGCAGTCCTACAACACCTTCAAGTACTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR-3UTR CAA 90 bp TTGCTCACGCAGCCCTCGGTGATGACAATGTTGAGAGGCCAGTCCACCTTGTACTTCAGCACCAGCGGGTaGAGCAGCTCTCCGGGCGTT +
Preference number: 3 (lower is better)
Translates to: LLTQPSVMTMLRGQSTLYFSTSG*SSSPGV
Trigger: AACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAA...GTACAAGGTGGACTGGCCTCTCAACATTGTCATCACCGAGGGCTGCGTGAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR-3UTR CAA 90 bp GAGCTGGCTGCGGAACTTGAGCACGAGGCTGAAGATGCTGTGGATGACGTTCATCCCCTGAAGACGGCCTaGTGCAGGTACTCTGCGTGC +
Preference number: 3 (lower is better)
Translates to: ELAAELEHEAEDAVDDVHPLKTA*CRYSAC
Trigger: GCACGCAGAGTACCTGCACAAGGCCGTCTTCAGGGG...ATGAACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTTCCGCAGCCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR-3UTR CAA 90 bp CTGCGGAACTTGAGCACGAGGCTGAAGATGCTGTGGATGACGTTCATGACGGGCCCGAGAACACCTTTATaGTGCACGTCCCCCGCAGAG +
Preference number: 3 (lower is better)
Translates to: LRNLSTRLKMLWMTFMTGPRTPL*CTSPAE
Trigger: CTCTGCGGGGGACGTGCACAATAAAGGTGTTCTCGG...GCCCGTCATGAACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTTCCGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR TCA 72 bp ACGAAATGCTGCATCTCGTGCTTGAACAGCTGCAGCTaGCGGAACTGCACAGAGCCGGCCATGTGGCTCAGC +
Preference number: 3 (lower is better)
Translates to: TKCCISCLNSCS*RNCTEPAMWLS
Trigger: GCTGAGCCACATGGCCGGCTCTGTGCAGTTCCGTCAGCTGCAGCTGTTCAAGCACGAGATGCAGCATTTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR GCA 72 bp CAGACGTCCTTGAGCGCCCACATCATGAGCTTCAGCTaGAGCAGGAAGGAGAAGACGCCGCTGTACTTGCTC +
Preference number: 3 (lower is better)
Translates to: QTSLSAHIMSFS*SRKEKTPLYLL
Trigger: GAGCAAGTACAGCGGCGTCTTCTCCTTCCTGCTGCAGCTGAAGCTCATGATGTGGGCGCTCAAGGACGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp TCCTCCAGGTCGCCCACGGTGGCCAACCTGGCCCTGAACTCGCACCAGGTGACGGCCTGCTCCCCACCCTaGGCCTCCGCCGCCGATGCC +
Preference number: 4 (lower is better)
Translates to: SSRSPTVANLALNSHQVTACSPP*ASAADA
Trigger: GGCATCGGCGGCGGAGGCTCAGGGTGGGGAGCAGGC...CGTCACCTGGTGCGAGTTCAGGGCCAGGTTGGCCACCGTGGGCGACCTGGAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp CTGAGCTCCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCTCGGGCCAGGGCCCGGAGACGTaGCCTGGGGGTGCACGCTCA +
Preference number: 4 (lower is better)
Translates to: LSSRQLSTSGALGANTSGQGPET*PGGARS
Trigger: TGAGCGTGCACCCCCAGGTCACGTCTCCGGGCCCTG...GCCCGAGGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGGAGCTCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp CTGAGCTCCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCTCGGGCGGGCTGAGTGCTGGCTaGTGCGGGTGCCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LSSRQLSTSGALGANTSGGLSAG*CGCLPR
Trigger: CCTGGGGAGGCACCCGCAGCAGCCAGCACTCAGCCC...GCCCGAGGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGGAGCTCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp GAGATGTGGGCGGCCAGCGGTGCCGTGATGGAGCGCTTCATGAGCACGGGCAGCCGGGCCCCCGGCGTGTaGGAAAACACCTCACCCGGG +
Preference number: 4 (lower is better)
Translates to: EMWAASGAVMERFMSTGSRAPGV*ENTSPG
Trigger: CCCGGGTGAGGTGTTTTCCCACACGCCGGGGGCCCG...GCTGCCCGTGCTCATGAAGCGCTCCATCACGGCACCGCTGGCCGCCCACATCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp CTCCTCCAGGTCGCCCACGGTGGCCAACCTGGCCCTGAACTCGCACCAGGTGACCTCGGGAGACGCTCCTaGCACGTGGACGCCCCGCTT +
Preference number: 4 (lower is better)
Translates to: LLQVAHGGQPGPELAPGDLGRRS*HVDAPL
Trigger: AAGCGGGGCGTCCACGTGTCAGGAGCGTCTCCCGAG...GTCACCTGGTGCGAGTTCAGGGCCAGGTTGGCCACCGTGGGCGACCTGGAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp CTCCTCCAGGTCGCCCACGGTGGCCAACCTGGCCCTGAACTCGCACCAGGTGACTGGCCTCCCTCTGGGTaGTCAGGGCCCGGAGACGTG +
Preference number: 4 (lower is better)
Translates to: LLQVAHGGQPGPELAPGDWPPSG*SGPGDV
Trigger: CACGTCTCCGGGCCCTGAGCACCCAGAGGGAGGCCA...GTCACCTGGTGCGAGTTCAGGGCCAGGTTGGCCACCGTGGGCGACCTGGAGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp GACGGCCTTGTGCAGGTACTCTGCGTGCGCACGCTGGATCTCCTCCAGGTCGCCGGGCAGCGGAGAGTCTaGGGGCTCAGCCGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: DGLVQVLCVRTLDLLQVAGQRRV*GLSRVG
Trigger: ACCCACCCGGCTGAGCCCCCAGACTCTCCGCTGCCC...GGCGACCTGGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp CCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCTCGGGCAGGTACTACGCCTGGGTGGGTGTaGGGGGAGCAGAGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: PGSSAHPGRWGQTPRAGTTPGWV*GEQSLP
Trigger: CGGGAGACTCTGCTCCCCTCACACCCACCCAGGCGT...AGTACCTGCCCGAGGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp GACGGCCTTGTGCAGGTACTCTGCGTGCGCACGCTGGATCTCCTCCAGGTCGCCTCCCAGGCTGAGCGCTaGCTGGGACGTGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: DGLVQVLCVRTLDLLQVASQAER*LGRVAR
Trigger: CCTGGCCACACGTCCCAGTCAGCGCTCAGCCTGGGA...GGCGACCTGGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCCGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp CTCCTCCAGGTCGCCCACGGTGGCCAACCTGGCCCTGAACTCGCACCAGGTGACGGGACCATGCCAGTCTaGACGGACGGCTCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: LLQVAHGGQPGPELAPGDGTMPV*TDGSAP
Trigger: AGGGGCTGAGCCGTCCGTGCAGACTGGCATGGTCCC...GTCACCTGGTGCGAGTTCAGGGCCAGGTTGGCCACCGTGGGCGACCTGGAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp CTCCTCCAGGTCGCCCACGGTGGCCAACCTGGCCCTGAACTCGCACCAGGTGACGAGAGGTTGGAGGCGTaGGGGGTGTCCCCATGCAGG +
Preference number: 4 (lower is better)
Translates to: LLQVAHGGQPGPELAPGDERLEA*GVSPCR
Trigger: CCTGCATGGGGACACCCCGCACGCCTCCAACCTCTC...GTCACCTGGTGCGAGTTCAGGGCCAGGTTGGCCACCGTGGGCGACCTGGAGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp ACAGAGTTCAGCACCAGCGGGTTGAGCAGCTCTCCGGGCGTTTGCCCAGCTCCAGGGGGCTCAGCCGGGTaGGTCCCGGGTTCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: TEFSTSGLSSSPGVCPAPGGSAG*VPGSGL
Trigger: CAGGCCAGAACCCGGGACCCACCCGGCTGAGCCCCC...TGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAACTCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp GACGGCCTTGTGCAGGTACTCTGCGTGCGCACGCTGGATCTCCTCCAGGTCGCCGAGCGAGGGAGAGGTTaGAGGCGTGCGGGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: DGLVQVLCVRTLDLLQVAERGRG*RRAGCP
Trigger: GGGACACCCCGCACGCCTCCAACCTCTCCCTCGCTC...GGCGACCTGGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp CTCCTCCAGGTCGCCCACGGTGGCCAACCTGGCCCTGAACTCGCACCAGGTGACTCTGCGTGCGCACGCTaGATCTCCTCCAGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: LLQVAHGGQPGPELAPGDSACAR*ISSRSP
Trigger: GGGCGACCTGGAGGAGATCCAGCGTGCGCACGCAGA...GTCACCTGGTGCGAGTTCAGGGCCAGGTTGGCCACCGTGGGCGACCTGGAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp GAGATGTGGGCGGCCAGCGGTGCCGTGATGGAGCGCTTCATGAGCACGGGCAGCCCGGAAGACAGGGAGTaGGAGAGGGTCCGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: EMWAASGAVMERFMSTGSPEDRE*ERVRRG
Trigger: GCCTCTTCGGACCCTCTCTCACTCCCTGTCTTCCGG...GCTGCCCGTGCTCATGAAGCGCTCCATCACGGCACCGCTGGCCGCCCACATCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp GTTCAGCACCAGCGGGTTGAGCAGCTCTCCGGGCGTTTGCCCAGCTCCAAGCTTCTGCGCTGGCCCAGGTaGGTCTTGGCAGCCGGCAGG +
Preference number: 4 (lower is better)
Translates to: VQHQRVEQLSGRLPSSKLLRWPR*VLAAGR
Trigger: CCTGCCGGCTGCCAAGACTCACCTGGGCCAGCGCAG...AAGCTTGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp GGAGATGTGGGCGGCCAGCGGTGCCGTGATGGAGCGCTTCATGAGCACGGGCAGTCCTCAGGCCACTGGTaGAGGCCTGGAACACGAGGC +
Preference number: 4 (lower is better)
Translates to: GDVGGQRCRDGALHEHGQSSGHW*RPGTRG
Trigger: GCCTCGTGTTCCAGGCCTTCACCAGTGGCCTGAGGA...CTGCCCGTGCTCATGAAGCGCTCCATCACGGCACCGCTGGCCGCCCACATCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp CACCAAGGAGATGTGGGCGGCCAGCGGTGCCGTGATGGAGCGCTTCATGAGCACTTCACCAGCACGGGCTaGGGGGCCTGTAGGACGCCC +
Preference number: 4 (lower is better)
Translates to: HQGDVGGQRCRDGALHEHFTSTG*GACRTP
Trigger: GGGCGTCCTACAGGCCCCGCAGCCCGTGCTGGTGAA...GTGCTCATGAAGCGCTCCATCACGGCACCGCTGGCCGCCCACATCTCCTTGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp GGCCTTGTGCAGGTACTCTGCGTGCGCACGCTGGATCTCCTCCAGGTCGCCCACGCTCTGTGGGCTGGCTaGTCCCCTCCTCCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: GLVQVLCVRTLDLLQVAHALWAG*SPPPEQ
Trigger: CTGCTCTGGAGGAGGGGAGCAGCCAGCCCACAGAGC...GTGGGCGACCTGGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp ACAGAGTTCAGCACCAGCGGGTTGAGCAGCTCTCCGGGCGTTTGCCCAGCTCCAAGCCTCCGCCGCCGATaGCTCCGCCTCCTCACCACG +
Preference number: 4 (lower is better)
Translates to: TEFSTSGLSSSPGVCPAPSLRRR*LRLLTT
Trigger: CGTGGTGAGGAGGCGGAGGCATCGGCGGCGGAGGCT...TGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAACTCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp GGCCTTGTGCAGGTACTCTGCGTGCGCACGCTGGATCTCCTCCAGGTCGCCCACGTGGGCGGCCAGCGGTaGCGTGATGGAGCGCTTCAT +
Preference number: 4 (lower is better)
Translates to: GLVQVLCVRTLDLLQVAHVGGQR*RDGALH
Trigger: ATGAAGCGCTCCATCACGGCACCGCTGGCCGCCCAC...GTGGGCGACCTGGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp AACACCTCGGGCAGGTACTTGAGAGCGAGGGAGAGGTTGGAGGCGTGCGGGGTGTGCGGGGTGTCCCCATaGAGGCTGCACTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: NTSGRYLRARERLEACGVCGVSP*RLHCRA
Trigger: GGCCCTGCAGTGCAGCCTGCATGGGGACACCCCGCA...CACCCCGCACGCCTCCAACCTCTCCCTCGCTCTCAAGTACCTGCCCGAGGTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp CTGAGGGACTGGGCGAACTCGCCGTCCTCCATCAGCAGGAAGTGCCGCAGTGCCGTGGGTCCCGGGTTCTaGCCTGCACGTCCACCCGTT +
Preference number: 4 (lower is better)
Translates to: LRDWANSPSSISRKCRSAVGPGF*PARPPV
Trigger: AACGGGTGGACGTGCAGGCCAGAACCCGGGACCCAC...GGCACTGCGGCACTTCCTGCTGATGGAGGACGGCGAGTTCGCCCAGTCCCTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp ACAGAGTTCAGCACCAGCGGGTTGAGCAGCTCTCCGGGCGTTTGCCCAGCTCCAGCAGCTTCACGCCGGTaGGAAACGCGGCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TEFSTSGLSSSPGVCPAPAASRR*ETRPWG
Trigger: GCCCCAGGGCCGCGTTTCCCACCGGCGTGAAGCTGC...TGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAACTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp TCCTCCAGGTCGCCCACGGTGGCCAACCTGGCCCTGAACTCGCACCAGGTGACGTGTCAGAGAAGGGTCTaGCCCCCTCCGCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SSRSPTVANLALNSHQVTCQRRV*PPPPAA
Trigger: TGCAGCAGGCGGAGGGGGCCAGACCCTTCTCTGACA...CGTCACCTGGTGCGAGTTCAGGGCCAGGTTGGCCACCGTGGGCGACCTGGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp CTGAGGGACTGGGCGAACTCGCCGTCCTCCATCAGCAGGAAGTGCCGCAGTGCCCTCCTCACCACGGCCTaGGCTGCTCTGGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: LRDWANSPSSISRKCRSALLTTA*AALGSC
Trigger: ACAGCTGCCCAGAGCAGCCCAGGCCGTGGTGAGGAG...GGCACTGCGGCACTTCCTGCTGATGGAGGACGGCGAGTTCGCCCAGTCCCTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp TTGTACCTGAGCTCCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCGCGGCAGACTGGACCTaGGGGTCCACGGGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: LYLSSRQLSTSGALGANTAADWT*GSTGKA
Trigger: CGCCTTCCCCGTGGACCCCCAGGTCCAGTCTGCCGC...GGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGGAGCTCAGGTACAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp GTCGCTGAGGGACTGGGCGAACTCGCCGTCCTCCATCAGCAGGAAGTGCCGCAGTCATCAGCGGCAGACTaGACCTGGGGGTCCACGGGG +
Preference number: 4 (lower is better)
Translates to: VAEGLGELAVLHQQEVPQSSAAD*TWGSTG
Trigger: CCCCGTGGACCCCCAGGTCCAGTCTGCCGCTGATGA...CTGCGGCACTTCCTGCTGATGGAGGACGGCGAGTTCGCCCAGTCCCTCAGCGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp CTCCTCCAGGTCGCCCACGGTGGCCAACCTGGCCCTGAACTCGCACCAGGTGACTTCACCAAGGAGATGTaGGCGGCCAGCGGTGCCGTG +
Preference number: 4 (lower is better)
Translates to: LLQVAHGGQPGPELAPGDFTKEM*AASGAV
Trigger: CACGGCACCGCTGGCCGCCCACATCTCCTTGGTGAA...GTCACCTGGTGCGAGTTCAGGGCCAGGTTGGCCACCGTGGGCGACCTGGAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp GGCCTTGTGCAGGTACTCTGCGTGCGCACGCTGGATCTCCTCCAGGTCGCCCACAGGGTCCGAAGAGGCTaGATGACAGGCGGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: GLVQVLCVRTLDLLQVAHRVRRG*MTGGLS
Trigger: GGAGAGGCCGCCTGTCATTCAGCCTCTTCGGACCCT...GTGGGCGACCTGGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp GACGGCCTTGTGCAGGTACTCTGCGTGCGCACGCTGGATCTCCTCCAGGTCGCCGCTCGGCCAGGTACCTaGGCTGCCGGCCAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: DGLVQVLCVRTLDLLQVAARPGT*AAGQVS
Trigger: AGAAACTTGGCCGGCAGCTCAGGTACCTGGCCGAGC...GGCGACCTGGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp CTGAGGGACTGGGCGAACTCGCCGTCCTCCATCAGCAGGAAGTGCCGCAGTGCCACGGGGCGCAAAAGATaGGCAATGGGCGGCTCGGAC +
Preference number: 4 (lower is better)
Translates to: LRDWANSPSSISRKCRSATGRKR*AMGGSD
Trigger: GTCCGAGCCGCCCATTGCTCATCTTTTGCGCCCCGT...GGCACTGCGGCACTTCCTGCTGATGGAGGACGGCGAGTTCGCCCAGTCCCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp CCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCTCGGGCAGGTACTGCAGGGCTGTGCGCTTaGGGTGGAAGCAGACGTCCT +
Preference number: 4 (lower is better)
Translates to: PGSSAHPGRWGQTPRAGTAGLCA*GGSRRP
Trigger: AGGACGTCTGCTTCCACCTCAAGCGCACAGCCCTGC...AGTACCTGCCCGAGGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp GGAGATGTGGGCGGCCAGCGGTGCCGTGATGGAGCGCTTCATGAGCACGGGCAGCTGCCGGTCACTCAGTaGACTCAGGACCCTGGATGC +
Preference number: 4 (lower is better)
Translates to: GDVGGQRCRDGALHEHGQLPVTQ*TQDPGC
Trigger: GCATCCAGGGTCCTGAGTGCACTGAGTGACCGGCAG...CTGCCCGTGCTCATGAAGCGCTCCATCACGGCACCGCTGGCCGCCCACATCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp CTGAGCTCCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCTCGGGCGACGTGACCTGGGGGTaGACGCTCAAGAGGACGTCT +
Preference number: 4 (lower is better)
Translates to: LSSRQLSTSGALGANTSGDVTWG*TLKRTS
Trigger: AGACGTCCTCTTGAGCGTGCACCCCCAGGTCACGTC...GCCCGAGGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGGAGCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp CAGCAGGAAGTGCCGCAGTGCCTCATAGTGCGCCTCCAGGTGCAGCTCCACGAACCACTCCGAGGGTCGTaGGCAGCGGAGAGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: QQEVPQCLIVRLQVQLHEPLRGS*AAESLG
Trigger: CCCCAGACTCTCCGCTGCCCACGACCCTCGGAGTGG...TTCGTGGAGCTGCACCTGGAGGCGCACTATGAGGCACTGCGGCACTTCCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp CTGAGCTCCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCTCGGGCGGCTCTGTTGGGGCCTaGGTGTGTTGGGCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: LSSRQLSTSGALGANTSGGSVGA*VCWAQL
Trigger: AAGCTGAGCCCAACACACCCAGGCCCCAACAGAGCC...GCCCGAGGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGGAGCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp CCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCTCGGGCAGGTACTTGTCTCCCGGGGTGTTaGGCCACCATGGTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PGSSAHPGRWGQTPRAGTCLPGC*ATMVGW
Trigger: CCACCCAACCATGGTGGCCCAACACCCCGGGAGACA...AGTACCTGCCCGAGGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp GGCCTTGTGCAGGTACTCTGCGTGCGCACGCTGGATCTCCTCCAGGTCGCCCACGGGTACCGCTCCAAGTaGTACTGCCCTGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: GLVQVLCVRTLDLLQVAHGYRSK*YCPARP
Trigger: AGGCCTGGCAGGGCAGTACCACTTGGAGCGGTACCC...GTGGGCGACCTGGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR CAA 72 bp AACACCTCGGGCAGGTACTTGAGAGCGAGGGAGAGGTaGGAGGCGTGCGGGGTGTCCCCATGCAGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: NTSGRYLRARER*EACGVSPCRLH
Trigger: GTGCAGCCTGCATGGGGACACCCCGCACGCCTCCAACCTCTCCCTCGCTCTCAAGTACCTGCCCGAGGTGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp GGAGATGTGGGCGGCCAGCGGTGCCGTGATGGAGCGCTTCATGAGCACGGGCAGACAAGGGTCACCAAATaGGAAGAGCCCGACGGTGGG +
Preference number: 4 (lower is better)
Translates to: GDVGGQRCRDGALHEHGQTRVTK*EEPDGG
Trigger: CCCACCGTCGGGCTCTTCTCATTTGGTGACCCTTGT...CTGCCCGTGCTCATGAAGCGCTCCATCACGGCACCGCTGGCCGCCCACATCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp GTCGCTGAGGGACTGGGCGAACTCGCCGTCCTCCATCAGCAGGAAGTGCCGCAGCGCCATAAGCGTCTCTaGACACCCCGCTGTACACCC +
Preference number: 4 (lower is better)
Translates to: VAEGLGELAVLHQQEVPQRHKRL*TPRCTP
Trigger: GGGTGTACAGCGGGGTGTTCAGAGACGCTTATGGCG...CTGCGGCACTTCCTGCTGATGGAGGACGGCGAGTTCGCCCAGTCCCTCAGCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp AACACCTCGGGCAGGTACTTGAGAGCGAGGGAGAGGTTGGAGGCGTGCGGGGTGCCTTCTCCTCCTTGCTaGCAGAGCTGTGGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: NTSGRYLRARERLEACGVPSPPC*QSCGGP
Trigger: TGGCCCGCCACAGCTCTGTCAGCAAGGAGGAGAAGG...CACCCCGCACGCCTCCAACCTCTCCCTCGCTCTCAAGTACCTGCCCGAGGTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp TTGTACCTGAGCTCCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCGGGAAGACCACCCCCTaGCACCTGCCCAAAGAGCCG +
Preference number: 4 (lower is better)
Translates to: LYLSSRQLSTSGALGANTGKTTP*HLPKEP
Trigger: CGGCTCTTTGGGCAGGTGTCAGGGGGTGGTCTTCCC...GGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGGAGCTCAGGTACAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp GCCGCAGTGCCTCATAGTGCGCCTCCAGGTGCAGCTCCACGAAGAAGTAGTCGAACGGCCAGGAGAGGGTaGCACTCCGAGGGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: AAVPHSAPPGAAPRRSSRTARRG*HSEGRG
Trigger: CCCACGACCCTCGGAGTGGCACCCTCTCCTGGCCGT...TCGACTACTTCTTCGTGGAGCTGCACCTGGAGGCGCACTATGAGGCACTGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp CTGAGCTCCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCTCGGGCCGTCCATGTCATAAGTaGGGCTGTGCACAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LSSRQLSTSGALGANTSGRPCHK*GCAQGP
Trigger: GGGCCCTTGTGCACAGCCGCACTTATGACATGGACG...GCCCGAGGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGGAGCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp CTGAGGGACTGGGCGAACTCGCCGTCCTCCATCAGCAGGAAGTGCCGCAGTGCCGTAGTGGTCGACCAGTaGCTGCCTCGCCTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: LRDWANSPSSISRKCRSAVVVDQ*LPRLPL
Trigger: GAGAGGAAGGCGAGGCAGGCACTGGTCGACCACTAC...GGCACTGCGGCACTTCCTGCTGATGGAGGACGGCGAGTTCGCCCAGTCCCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp GACGGCCTTGTGCAGGTACTCTGCGTGCGCACGCTGGATCTCCTCCAGGTCGCCCTCCACAGTGCCTTCTaGTCCCGACGAGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: DGLVQVLCVRTLDLLQVALHSAF*SRRAAS
Trigger: AGAGGCAGCTCGTCGGGAGCAGAAGGCACTGTGGAG...GGCGACCTGGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp CCCAGCTCCAAGCTTCTCAAAGAGCAGGTCGCTGAGGGACTGGGCGAACTCGCCCGCTCCAAGTGGTACTaGCCTGCCAGGCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: PSSKLLKEQVAEGLGELARSKWY*PARPAR
Trigger: CCTGGCAGGCCTGGCAGGGCAGTACCACTTGGAGCG...GGCGAGTTCGCCCAGTCCCTCAGCGACCTGCTCTTTGAGAAGCTTGGAGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp CACCAAGGAGATGTGGGCGGCCAGCGGTGCCGTGATGGAGCGCTTCATGAGCACAAGGCCTGGGCCGGCTaGCAGAGCGAAAACGTGGCA +
Preference number: 4 (lower is better)
Translates to: HQGDVGGQRCRDGALHEHKAWAG*QSENVA
Trigger: TGCCACGTTTTCGCTCTGCCAGCCGGCCCAGGCCTT...GTGCTCATGAAGCGCTCCATCACGGCACCGCTGGCCGCCCACATCTCCTTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp CTGAGCTCCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCTCGGGCTGTAGGGCTCGCAGCTaGTCTTCAGCAGGGACAGCA +
Preference number: 4 (lower is better)
Translates to: LSSRQLSTSGALGANTSGCRARS*SSAGTA
Trigger: TGCTGTCCCTGCTGAAGACCAGCTGCGAGCCCTACA...GCCCGAGGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGGAGCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp GGCCTTGTGCAGGTACTCTGCGTGCGCACGCTGGATCTCCTCCAGGTCGCCCACGTGCACTCAGGACCCTaGATGCTGCTTCCCGGGCAT +
Preference number: 4 (lower is better)
Translates to: GLVQVLCVRTLDLLQVAHVHSGP*MLLPGH
Trigger: ATGCCCGGGAAGCAGCATCCAGGGTCCTGAGTGCAC...GTGGGCGACCTGGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp CAGCAGGAAGTGCCGCAGTGCCTCATAGTGCGCCTCCAGGTGCAGCTCCACGAACCCGGAGACGTGACCTaGGGGTGCACGCTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: QQEVPQCLIVRLQVQLHEPGDVT*GCTLKR
Trigger: CCTCTTGAGCGTGCACCCCCAGGTCACGTCTCCGGG...TTCGTGGAGCTGCACCTGGAGGCGCACTATGAGGCACTGCGGCACTTCCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp ACAGAGTTCAGCACCAGCGGGTTGAGCAGCTCTCCGGGCGTTTGCCCAGCTCCAGCCCCCAGCACCATGTaGGGCGGAGGGATGGGTACA +
Preference number: 4 (lower is better)
Translates to: TEFSTSGLSSSPGVCPAPAPSTM*GGGMGT
Trigger: TGTACCCATCCCTCCGCCCCACATGGTGCTGGGGGC...TGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAACTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp CCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCTCGGGCAGGTACTGGGGGAGGACAGAGATaGCCCCACTTCTACAGGCAG +
Preference number: 4 (lower is better)
Translates to: PGSSAHPGRWGQTPRAGTGGGQR*PHFYRQ
Trigger: CTGCCTGTAGAAGTGGGGCCATCTCTGTCCTCCCCC...AGTACCTGCCCGAGGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp AACACCTCGGGCAGGTACTTGAGAGCGAGGGAGAGGTTGGAGGCGTGCGGGGTGGGTGTTGGGCCACCATaGTTGGGTGGGAGCCACGTC +
Preference number: 4 (lower is better)
Translates to: NTSGRYLRARERLEACGVGVGPP*LGGSHV
Trigger: GACGTGGCTCCCACCCAACCATGGTGGCCCAACACC...CACCCCGCACGCCTCCAACCTCTCCCTCGCTCTCAAGTACCTGCCCGAGGTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp CTGAGGGACTGGGCGAACTCGCCGTCCTCCATCAGCAGGAAGTGCCGCAGTGCCGCCTGGGAGATGAGCTaGCTGCGGAACTTGAGCACG +
Preference number: 4 (lower is better)
Translates to: LRDWANSPSSISRKCRSAAWEMS*LRNLST
Trigger: CGTGCTCAAGTTCCGCAGCCAGCTCATCTCCCAGGC...GGCACTGCGGCACTTCCTGCTGATGGAGGACGGCGAGTTCGCCCAGTCCCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR CAA 72 bp AGGGCCTTGCTCAGCACAGAGTTCAGCACCAGCGGGTaGAGCAGCTCTCCGGGCGTTTGCCCAGCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: RALLSTEFSTSG*SSSPGVCPAPS
Trigger: GCTTGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAACTCTGTGCTGAGCAAGGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR CAA 72 bp TACCTGAGCTCCAGGCAGCTCAGCACATCCGGGGCGTaGGGGGCAAACACCTCGGGCAGGTACTTGAGAGCG +
Preference number: 4 (lower is better)
Translates to: YLSSRQLSTSGA*GANTSGRYLRA
Trigger: CGCTCTCAAGTACCTGCCCGAGGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGGAGCTCAGGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp GGAGATGTGGGCGGCCAGCGGTGCCGTGATGGAGCGCTTCATGAGCACGGGCAGGGAAGTCTCCAATGCTaGGGCTGTCAGAGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: GDVGGQRCRDGALHEHGQGSLQC*GCQRRV
Trigger: GACCCTTCTCTGACAGCCTCAGCATTGGAGACTTCC...CTGCCCGTGCTCATGAAGCGCTCCATCACGGCACCGCTGGCCGCCCACATCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp GTTCAGCACCAGCGGGTTGAGCAGCTCTCCGGGCGTTTGCCCAGCTCCAAGCTTTCAGCACCAGCGGGTTaGGCAGCTCTCCGGGCGTTT +
Preference number: 4 (lower is better)
Translates to: VQHQRVEQLSGRLPSSKLSAPAG*AALRAF
Trigger: AAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGA...AAGCTTGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp GTTCAGCACCAGCGGGTTGAGCAGCTCTCCGGGCGTTTGCCCAGCTCCAAGCTTTCCCGGGTTCTGGCCTaGACGTCCACCCGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: VQHQRVEQLSGRLPSSKLSRVLA*TSTRSP
Trigger: TGGAGAACGGGTGGACGTGCAGGCCAGAACCCGGGA...AAGCTTGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp AGGTGGAAGCAGACGTCCTTGAGCGCCCACATCATGAGCTTCAGCTGCAGCAGGGGCCTCCTCCACAGGTaGCCGGGAGCACAGCGCCAA +
Preference number: 4 (lower is better)
Translates to: RWKQTSLSAHIMSFSCSRGLLHR*PGAQRQ
Trigger: TTGGCGCTGTGCTCCCGGGCACCTGTGGAGGAGGCC...CCTGCTGCAGCTGAAGCTCATGATGTGGGCGCTCAAGGACGTCTGCTTCCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp GTTTGCCCAGCTCCAAGCTTCTCAAAGAGCAGGTCGCTGAGGGACTGGGCGAACTCATCCAGCTCCTCCTaGCTGGCCGCCTGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: VCPAPSFSKSRSLRDWANSSSSS*LAAWRR
Trigger: GCGACGCCAGGCGGCCAGGCAGGAGGAGCTGGATGA...GTTCGCCCAGTCCCTCAGCGACCTGCTCTTTGAGAAGCTTGGAGCTGGGCAAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp TCCTCCAGGTCGCCCACGGTGGCCAACCTGGCCCTGAACTCGCACCAGGTGACGGCACTCTCCAGTCGGTaGCTCTGGATTCTCCACAGT +
Preference number: 4 (lower is better)
Translates to: SSRSPTVANLALNSHQVTALSSR*LWILHS
Trigger: ACTGTGGAGAATCCAGAGGCACCGACTGGAGAGTGC...CGTCACCTGGTGCGAGTTCAGGGCCAGGTTGGCCACCGTGGGCGACCTGGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp GTTCAGCACCAGCGGGTTGAGCAGCTCTCCGGGCGTTTGCCCAGCTCCAAGCTTCTGAGCTGCCCAAGCTaGACTCTGCAGCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: VQHQRVEQLSGRLPSSKLLSCPS*TLQPAG
Trigger: CCCTGCAGGCTGCAGAGTGCAGCTTGGGCAGCTCAG...AAGCTTGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp TTGTACCTGAGCTCCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCCACCACGGCCTGGGCTaGTCTGGGCAGCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: LYLSSRQLSTSGALGANTHHGLG*SGQLCL
Trigger: AAGACACAGCTGCCCAGAGCAGCCCAGGCCGTGGTG...GGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGGAGCTCAGGTACAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp GGCCTTGTGCAGGTACTCTGCGTGCGCACGCTGGATCTCCTCCAGGTCGCCCACCTGAAGACGGCCTTGTaGAGGTACTCTGCGTGCGCA +
Preference number: 4 (lower is better)
Translates to: GLVQVLCVRTLDLLQVAHLKTAL*RYSACA
Trigger: TGCGCACGCAGAGTACCTGCACAAGGCCGTCTTCAG...GTGGGCGACCTGGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp GGGTTGAGCAGCTCTCCGGGCGTTTGCCCAGCTCCAAGCTTCTCAAAGAGCAGGAGTGCAAAGTTGGGGTaGTCTGCACCCCGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: GLSSSPGVCPAPSFSKSRSAKLG*SAPRGP
Trigger: GGGCCCGCGGGGTGCAGAGCACCCCAACTTTGCACT...CCTGCTCTTTGAGAAGCTTGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp GTTTGCCCAGCTCCAAGCTTCTCAAAGAGCAGGTCGCTGAGGGACTGGGCGAACGGCCCAGGTGAGTCTTaGCAGCCGGCAGGAGGGCCT +
Preference number: 4 (lower is better)
Translates to: VCPAPSFSKSRSLRDWANGPGES*QPAGGP
Trigger: AGGCCCTCCTGCCGGCTGCCAAGACTCACCTGGGCC...GTTCGCCCAGTCCCTCAGCGACCTGCTCTTTGAGAAGCTTGGAGCTGGGCAAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp CACCTTTATTGTGCACGTCCCCCGCAGAGCAGCCTCAGGCGTCCTGGTAGTAGTCCAAACGGTCGGCCTTaGGGCCCAGGCCACCCACTC +
Preference number: 4 (lower is better)
Translates to: HLYCARPPQSSLRRPGSSPNGRP*GPGHPL
Trigger: GAGTGGGTGGCCTGGGCCCCAAGGCCGACCGTTTGG...ACTACTACCAGGACGCCTGAGGCTGCTCTGCGGGGGACGTGCACAATAAAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp TTGTACCTGAGCTCCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCGGGCAGGCCAGTGCCTaGAGCAGCCTCCATAACCTG +
Preference number: 4 (lower is better)
Translates to: LYLSSRQLSTSGALGANTGQASA*SSLHNL
Trigger: CAGGTTATGGAGGCTGCTCCAGGCACTGGCCTGCCC...GGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGGAGCTCAGGTACAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp ACAGAGTTCAGCACCAGCGGGTTGAGCAGCTCTCCGGGCGTTTGCCCAGCTCCAGACGCTCCTGACACGTaGACGCCCCGCTTCACCACA +
Preference number: 4 (lower is better)
Translates to: TEFSTSGLSSSPGVCPAPDAPDT*TPRFTT
Trigger: TGTGGTGAAGCGGGGCGTCCACGTGTCAGGAGCGTC...TGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAACTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp GCCGCTGTACTTGCTCACGCAGCCCTCGGTGATGACAATGTTGAGAGGCCAGTCTCCTGCCTGGCCGCCTaGCGTCGCTCCTGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: AAVLAHAALGDDNVERPVSCLAA*RRSWSF
Trigger: GAAGGACCAGGAGCGACGCCAGGCGGCCAGGCAGGA...GACTGGCCTCTCAACATTGTCATCACCGAGGGCTGCGTGAGCAAGTACAGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp CCCAGCTCCAAGCTTCTCAAAGAGCAGGTCGCTGAGGGACTGGGCGAACTCGCCCGTACTCCTGTGGCCTaGAGGGCTGAGTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PSSKLLKEQVAEGLGELARTPVA*RAECWL
Trigger: CAGCCAGCACTCAGCCCTCCAGGCCACAGGAGTACG...GGCGAGTTCGCCCAGTCCCTCAGCGACCTGCTCTTTGAGAAGCTTGGAGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp GACGGCCTTGTGCAGGTACTCTGCGTGCGCACGCTGGATCTCCTCCAGGTCGCCAAGCGTAGTCCCCTGTaGGAAGACCACCCCCTGACA +
Preference number: 4 (lower is better)
Translates to: DGLVQVLCVRTLDLLQVAKRSPL*EDHPLT
Trigger: TGTCAGGGGGTGGTCTTCCCACAGGGGACTACGCTT...GGCGACCTGGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp CACCAAGGAGATGTGGGCGGCCAGCGGTGCCGTGATGGAGCGCTTCATGAGCACTGTAGGCCACCTTCTTaGGGCTCCGCTTTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: HQGDVGGQRCRDGALHEHCRPPS*GSALPS
Trigger: AGAGGGCAAAGCGGAGCCTCAAGAAGGTGGCCTACA...GTGCTCATGAAGCGCTCCATCACGGCACCGCTGGCCGCCCACATCTCCTTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp CCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCTCGGGCAGGTACTCCACCTCTTTGGAGATaGGCACGTAGCCATGTGTCC +
Preference number: 4 (lower is better)
Translates to: PGSSAHPGRWGQTPRAGTPPLWR*ARSHVS
Trigger: GGACACATGGCTACGTGCTCATCTCCAAAGAGGTGG...AGTACCTGCCCGAGGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp GTTCAGCACCAGCGGGTTGAGCAGCTCTCCGGGCGTTTGCCCAGCTCCAAGCTTGGACGAACTCGGCTTTaGACCCGTTCTTCGGGACCC +
Preference number: 4 (lower is better)
Translates to: VQHQRVEQLSGRLPSSKLGRTRL*TRSSGP
Trigger: GGGTCCCGAAGAACGGGTGCAAAGCCGAGTTCGTCC...AAGCTTGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp AACACCTCGGGCAGGTACTTGAGAGCGAGGGAGAGGTTGGAGGCGTGCGGGGTGAGAGTAAACACGCCCTaGCCTCCCCAGTCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: NTSGRYLRARERLEACGVRVNTP*PPQSKH
Trigger: GTGCTTGGACTGGGGAGGGCAGGGCGTGTTTACTCT...CACCCCGCACGCCTCCAACCTCTCCCTCGCTCTCAAGTACCTGCCCGAGGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp AGCAGGAAGGAGAAGACGCCGCTGTACTTGCTCACGCAGCCCTCGGTGATGACAGGGCCACCCTCTCCATaGGCCCAACGTAGACGGCAC +
Preference number: 4 (lower is better)
Translates to: SRKEKTPLYLLTQPSVMTGPPSP*AQRRRH
Trigger: GTGCCGTCTACGTTGGGCGCATGGAGAGGGTGGCCC...TGTCATCACCGAGGGCTGCGTGAGCAAGTACAGCGGCGTCTTCTCCTTCCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp TCCGAGAACACCTTTATTGTGCACGTCCCCCGCAGAGCAGCCTCAGGCGTCCTGTGGTCGACCAGTGCCTaGCTCGCCTTCCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SENTFIVHVPRRAASGVLWSTSA*LAFLSS
Trigger: GCTGGAGAGGAAGGCGAGGCAGGCACTGGTCGACCA...CAGGACGCCTGAGGCTGCTCTGCGGGGGACGTGCACAATAAAGGTGTTCTCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp CCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCTCGGGCAGGTACTCCTCTGCAGAGAGCTTaGTGTAGTGGTCGACCAGTG +
Preference number: 4 (lower is better)
Translates to: PGSSAHPGRWGQTPRAGTPLQRA*CSGRPV
Trigger: CACTGGTCGACCACTACAGCAAGCTCTCTGCAGAGG...AGTACCTGCCCGAGGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp CACCAAGGAGATGTGGGCGGCCAGCGGTGCCGTGATGGAGCGCTTCATGAGCACCTGGATTCTCCACAGTaGCTTCTGCTCCCGACGAGC +
Preference number: 4 (lower is better)
Translates to: HQGDVGGQRCRDGALHEHLDSPQ*LLLPTS
Trigger: GCTCGTCGGGAGCAGAAGGCACTGTGGAGAATCCAG...GTGCTCATGAAGCGCTCCATCACGGCACCGCTGGCCGCCCACATCTCCTTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp CTGAGCTCCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCTCGGGCTCCAAGTTAATGGTCTaGAGCGCCACCTCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LSSRQLSTSGALGANTSGSKLMV*SATSRR
Trigger: TCTCCTGGAGGTGGCGCTGCAGACCATTAACTTGGA...GCCCGAGGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGGAGCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp CTGAGGGACTGGGCGAACTCGCCGTCCTCCATCAGCAGGAAGTGCCGCAGTGCCGGACTGCTGCATGAGTaGAAAGTTGGGGTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LRDWANSPSSISRKCRSAGLLHE*KVGVLC
Trigger: GCAGAGCACCCCAACTTTGCACTCATGCAGCAGTCC...GGCACTGCGGCACTTCCTGCTGATGGAGGACGGCGAGTTCGCCCAGTCCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp GTTTGCCCAGCTCCAAGCTTCTCAAAGAGCAGGTCGCTGAGGGACTGGGCGAACAGAAGAGCCCGACGGTaGGCAGGCCAGTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: VCPAPSFSKSRSLRDWANRRARR*AGQCLE
Trigger: CTCCAGGCACTGGCCTGCCCACCGTCGGGCTCTTCT...GTTCGCCCAGTCCCTCAGCGACCTGCTCTTTGAGAAGCTTGGAGCTGGGCAAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp GGCCTTGTGCAGGTACTCTGCGTGCGCACGCTGGATCTCCTCCAGGTCGCCCACCTGATCCACACTCGGTaGGACCTTAATAGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: GLVQVLCVRTLDLLQVAHLIHTR*DLNSQP
Trigger: GGGCTGGCTATTAAGGTCCCACCGAGTGTGGATCAG...GTGGGCGACCTGGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp AACACCTCGGGCAGGTACTTGAGAGCGAGGGAGAGGTTGGAGGCGTGCGGGGTGAGCTGGAGCTCCCCTTaGTGGAGCCTGCAGAACTTG +
Preference number: 4 (lower is better)
Translates to: NTSGRYLRARERLEACGVSWSSP*WSLQNL
Trigger: CAAGTTCTGCAGGCTCCACCAAGGGGAGCTCCAGCT...CACCCCGCACGCCTCCAACCTCTCCCTCGCTCTCAAGTACCTGCCCGAGGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp AACTTGAGCACGAGGCTGAAGATGCTGTGGATGACGTTCATGACGGGCGCCGCCCCCCCAGCAAGCAGCTaGAGCTCCCCTTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: NLSTRLKMLWMTFMTGAAPPASS*SSPWWS
Trigger: GCTCCACCAAGGGGAGCTCCAGCTGCTTGCTGGGGG...GGCGGCGCCCGTCATGAACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTT
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp CACCTTTATTGTGCACGTCCCCCGCAGAGCAGCCTCAGGCGTCCTGGTAGTAGTTCAGGGTGGGCGGAGTaGAAAGGACGCAGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: HLYCARPPQSSLRRPGSSSGWAE*KGRRPG
Trigger: ACCGGGCCTGCGTCCTTTCCACTCCGCCCACCCTGA...ACTACTACCAGGACGCCTGAGGCTGCTCTGCGGGGGACGTGCACAATAAAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp GACGGCCTTGTGCAGGTACTCTGCGTGCGCACGCTGGATCTCCTCCAGGTCGCCTCCAGTCGGTGCCTCTaGATTCTCCACAGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: DGLVQVLCVRTLDLLQVASSRCL*ILHSAF
Trigger: GAAGGCACTGTGGAGAATCCAGAGGCACCGACTGGA...GGCGACCTGGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCCGTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp CACCTTTATTGTGCACGTCCCCCGCAGAGCAGCCTCAGGCGTCCTGGTAGTAGTGCTCAAGAGGACGTCTaGCGGCTCCTGGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: HLYCARPPQSSLRRPGSSAQEDV*RLLGLV
Trigger: CACCAGCCCCAGGAGCCGCCAGACGTCCTCTTGAGC...ACTACTACCAGGACGCCTGAGGCTGCTCTGCGGGGGACGTGCACAATAAAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp AGGTGGAAGCAGACGTCCTTGAGCGCCCACATCATGAGCTTCAGCTGCAGCAGGGCACATCCGGGGCGTTaGGGGCAAACACCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: RWKQTSLSAHIMSFSCSRAHPGR*GQTPRA
Trigger: TGCCCGAGGTGTTTGCCCCCAACGCCCCGGATGTGC...CCTGCTGCAGCTGAAGCTCATGATGTGGGCGCTCAAGGACGTCTGCTTCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp AGGTGGAAGCAGACGTCCTTGAGCGCCCACATCATGAGCTTCAGCTGCAGCAGGCGTCGAACAGCTGCGTaGTGCTGGCCATGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: RWKQTSLSAHIMSFSCSRRRTAA*CWPCPF
Trigger: GAAGGGGCATGGCCAGCATCACGCAGCTGTTCGACG...CCTGCTGCAGCTGAAGCTCATGATGTGGGCGCTCAAGGACGTCTGCTTCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp GCCGCAGTGCCTCATAGTGCGCCTCCAGGTGCAGCTCCACGAAGAAGTAGTCGACCTTCGTCTTCCCACTaGTCCACACTCGGTGGGACC +
Preference number: 4 (lower is better)
Translates to: AAVPHSAPPGAAPRRSSRPSSSH*STLGGT
Trigger: GGTCCCACCGAGTGTGGATCAGTGGGAAGACGAAGG...TCGACTACTTCTTCGTGGAGCTGCACCTGGAGGCGCACTATGAGGCACTGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp CGCAGAGCAGCCTCAGGCGTCCTGGTAGTAGTTGTTGAAGTTGATGCGCAGCAGCCGAGAGCAGGCTGCTaGTGCTCTCGGGAGACGCTC +
Preference number: 4 (lower is better)
Translates to: RRAASGVLVVVVEVDAQQPRAGC*CSRETL
Trigger: GAGCGTCTCCCGAGAGCATCAGCAGCCTGCTCTCGG...CTGCTGCGCATCAACTTCAACAACTACTACCAGGACGCCTGAGGCTGCTCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp TTGTACCTGAGCTCCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCCAAGGCCATCCGTTCTaGCATCTGCCGGTCACTCAG +
Preference number: 4 (lower is better)
Translates to: LYLSSRQLSTSGALGANTQGHPF*HLPVTQ
Trigger: CTGAGTGACCGGCAGATGTCAGAACGGATGGCCTTG...GGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGGAGCTCAGGTACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp CTGAGCTCCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCTCGGGCAGCTGTGTCTTCCTGTaGGTTGAGAGGCCAATTTGG +
Preference number: 4 (lower is better)
Translates to: LSSRQLSTSGALGANTSGSCVFL*VERPIW
Trigger: CCAAATTGGCCTCTCAACTCACAGGAAGACACAGCT...GCCCGAGGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGGAGCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp GTTCAGCACCAGCGGGTTGAGCAGCTCTCCGGGCGTTTGCCCAGCTCCAAGCTTGGCCTCATAGGTAAGTaGGGCTTCCCACAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: VQHQRVEQLSGRLPSSKLGLIGK*GFPQVH
Trigger: GTGGACCTGTGGGAAGCCGCACTTACCTATGAGGCC...AAGCTTGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp CACCAAGGAGATGTGGGCGGCCAGCGGTGCCGTGATGGAGCGCTTCATGAGCACCCCCTTGGTGGAGCCTaGAGAACTTGTCGAAAGCGT +
Preference number: 4 (lower is better)
Translates to: HQGDVGGQRCRDGALHEHPLGGA*RTCRKR
Trigger: ACGCTTTCGACAAGTTCTGCAGGCTCCACCAAGGGG...GTGCTCATGAAGCGCTCCATCACGGCACCGCTGGCCGCCCACATCTCCTTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp AGCAGGAAGGAGAAGACGCCGCTGTACTTGCTCACGCAGCCCTCGGTGATGACACCACCCCCTGACACCTaGCCAAAGAGCCGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: SRKEKTPLYLLTQPSVMTPPPDT*PKSRSV
Trigger: CACAGAGCGGCTCTTTGGGCAGGTGTCAGGGGGTGG...TGTCATCACCGAGGGCTGCGTGAGCAAGTACAGCGGCGTCTTCTCCTTCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp GGAGATGTGGGCGGCCAGCGGTGCCGTGATGGAGCGCTTCATGAGCACGGGCAGATCATGAGCTTCAGCTaGAGCAGGAAGGAGAAGACG +
Preference number: 4 (lower is better)
Translates to: GDVGGQRCRDGALHEHGQIMSFS*SRKEKT
Trigger: CGTCTTCTCCTTCCTGCTGCAGCTGAAGCTCATGAT...CTGCCCGTGCTCATGAAGCGCTCCATCACGGCACCGCTGGCCGCCCACATCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp TCCGAGAACACCTTTATTGTGCACGTCCCCCGCAGAGCAGCCTCAGGCGTCCTGTGCAGGTACTCTGCGTaGGCACGCTGGATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SENTFIVHVPRRAASGVLCRYSA*ARWISS
Trigger: GGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCA...CAGGACGCCTGAGGCTGCTCTGCGGGGGACGTGCACAATAAAGGTGTTCTCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp CAGCAGGAAGTGCCGCAGTGCCTCATAGTGCGCCTCCAGGTGCAGCTCCACGAACTTGTGCAGGTACTCTaGGTGCGCACGCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: QQEVPQCLIVRLQVQLHELVQVL*VRTLDL
Trigger: GAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAG...TTCGTGGAGCTGCACCTGGAGGCGCACTATGAGGCACTGCGGCACTTCCTGCTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp GACGTCCTTGAGCGCCCACATCATGAGCTTCAGCTGCAGCAGGAAGGAGAAGACGCCTCCCAGGCTCTGTaGGTCCCACAGTCCCACTCC +
Preference number: 4 (lower is better)
Translates to: DVLERPHHELQLQQEGEDASQAL*VPQSHS
Trigger: GGAGTGGGACTGTGGGACGCACAGAGCCTGGGAGGC...GTCTTCTCCTTCCTGCTGCAGCTGAAGCTCATGATGTGGGCGCTCAAGGACGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp AGCAGGAAGGAGAAGACGCCGCTGTACTTGCTCACGCAGCCCTCGGTGATGACACCACAGGTCCACGTCTaGGGTCACGCTGGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: SRKEKTPLYLLTQPSVMTPQVHV*GHAGLR
Trigger: TCTGAGCCCAGCGTGACCCCAGACGTGGACCTGTGG...TGTCATCACCGAGGGCTGCGTGAGCAAGTACAGCGGCGTCTTCTCCTTCCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp GCCGCAGTGCCTCATAGTGCGCCTCCAGGTGCAGCTCCACGAAGAAGTAGTCGATTCACCACAAAGGCCTaGGCCGGCTGGCAGAGCGAA +
Preference number: 4 (lower is better)
Translates to: AAVPHSAPPGAAPRRSSRFTTKA*AGWQSE
Trigger: TTCGCTCTGCCAGCCGGCCCAGGCCTTTGTGGTGAA...TCGACTACTTCTTCGTGGAGCTGCACCTGGAGGCGCACTATGAGGCACTGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp GATGAGCTGGCTGCGGAACTTGAGCACGAGGCTGAAGATGCTGTGGATGACGTTTGGGAAACGCGGCCCTaGGGCCTCCTCCACAGGTGC +
Preference number: 4 (lower is better)
Translates to: DELAAELEHEAEDAVDDVWETRP*GLLHRC
Trigger: GCACCTGTGGAGGAGGCCCCAGGGCCGCGTTTCCCA...AACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTTCCGCAGCCAGCTCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp TTGCTCACGCAGCCCTCGGTGATGACAATGTTGAGAGGCCAGTCCACCTTGTACGCCTTGGCCTCCCTCTaGGTGCTCAGGGCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: LLTQPSVMTMLRGQSTLYALASL*VLRARR
Trigger: TCTCCGGGCCCTGAGCACCCAGAGGGAGGCCAAGGC...GTACAAGGTGGACTGGCCTCTCAACATTGTCATCACCGAGGGCTGCGTGAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp GAGCTGGCTGCGGAACTTGAGCACGAGGCTGAAGATGCTGTGGATGACGTTCATTGGAGGGCTGAGTGCTaGCTGCTGCGGGTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: ELAAELEHEAEDAVDDVHWRAEC*LLRVPP
Trigger: GGGAGGCACCCGCAGCAGCCAGCACTCAGCCCTCCA...ATGAACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTTCCGCAGCCAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp ACCTTTATTGTGCACGTCCCCCGCAGAGCAGCCTCAGGCGTCCTGGTAGTAGTTCCAGAGCAGCACGCCTaGGTGGGTGTGAGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: TFIVHVPRRAASGVLVVVPEQHA*VGVRGA
Trigger: TGCTCCCCTCACACCCACCCAGGCGTGCTGCTCTGG...AACTACTACCAGGACGCCTGAGGCTGCTCTGCGGGGGACGTGCACAATAAAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp CACCTTTATTGTGCACGTCCCCCGCAGAGCAGCCTCAGGCGTCCTGGTAGTAGTCAAAGAGCCGCTCTGTaGGCTGGCTGCTCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: HLYCARPPQSSLRRPGSSQRAAL*AGCSPP
Trigger: AGGAGGGGAGCAGCCAGCCCACAGAGCGGCTCTTTG...ACTACTACCAGGACGCCTGAGGCTGCTCTGCGGGGGACGTGCACAATAAAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp AGGTGGAAGCAGACGTCCTTGAGCGCCCACATCATGAGCTTCAGCTGCAGCAGGGGAGGGATGGGTACATaGGTGTTCCACCGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: RWKQTSLSAHIMSFSCSRGGMGT*VFHRGR
Trigger: CCGGCCACGGTGGAACACCCATGTACCCATCCCTCC...CCTGCTGCAGCTGAAGCTCATGATGTGGGCGCTCAAGGACGTCTGCTTCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp CCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCTCGGGCAGGTACTGCAAAAGATGAGCAATaGGCGGCTCGGACATGGACT +
Preference number: 4 (lower is better)
Translates to: PGSSAHPGRWGQTPRAGTAKDEQ*AARTWT
Trigger: AGTCCATGTCCGAGCCGCCCATTGCTCATCTTTTGC...AGTACCTGCCCGAGGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp CTGCGGAACTTGAGCACGAGGCTGAAGATGCTGTGGATGACGTTCATGACGGGCAGGTCGCTGAGGGACTaGGCGAACTCGCCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LRNLSTRLKMLWMTFMTGRSLRD*ANSPSS
Trigger: GGAGGACGGCGAGTTCGCCCAGTCCCTCAGCGACCT...GCCCGTCATGAACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTTCCGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp TTGTACCTGAGCTCCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCGCTGTGCGCTTGAGGTaGAAGCAGACGTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: LYLSSRQLSTSGALGANTAVRLR*KQTSLS
Trigger: GCTCAAGGACGTCTGCTTCCACCTCAAGCGCACAGC...GGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGGAGCTCAGGTACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR CAA 72 bp GTTCAGCACCAGCGGGTTGAGCAGCTCTCCGGGCGTTaGCCCAGCTCCAAGCTTCTCAAAGAGCAGGTCGCT +
Preference number: 4 (lower is better)
Translates to: VQHQRVEQLSGR*PSSKLLKEQVA
Trigger: AGCGACCTGCTCTTTGAGAAGCTTGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp GGAGATGTGGGCGGCCAGCGGTGCCGTGATGGAGCGCTTCATGAGCACGGGCAGCTGGAGATCAGAGACTaGACGTCCATCTCAAACACA +
Preference number: 4 (lower is better)
Translates to: GDVGGQRCRDGALHEHGQLEIRD*TSISNT
Trigger: TGTGTTTGAGATGGACGTTCAGTCTCTGATCTCCAG...CTGCCCGTGCTCATGAAGCGCTCCATCACGGCACCGCTGGCCGCCCACATCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp CCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCTCGGGCAGGTACTGGTTCACCTGAATCATaGACTCGCCATAAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: PGSSAHPGRWGQTPRAGTGSPES*TRHKRL
Trigger: GAGACGCTTATGGCGAGTTCATGATTCAGGTGAACC...AGTACCTGCCCGAGGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp CAGCAGGAAGTGCCGCAGTGCCTCATAGTGCGCCTCCAGGTGCAGCTCCACGAAGTTCACGGGCGTAGCTaGAGTCATCATCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QQEVPQCLIVRLQVQLHEVHGRS*SHHPAP
Trigger: AGGAGCTGGATGATGACTTCAGCTACGCCCGTGAAC...TTCGTGGAGCTGCACCTGGAGGCGCACTATGAGGCACTGCGGCACTTCCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp CACCAAGGAGATGTGGGCGGCCAGCGGTGCCGTGATGGAGCGCTTCATGAGCACCAGACTCCCCTAAGCTaGTGCTGGCATTGGATACGT +
Preference number: 4 (lower is better)
Translates to: HQGDVGGQRCRDGALHEHQTPLS*CWHWIR
Trigger: ACGTATCCAATGCCAGCATCAGCTTAGGGGAGTCTG...GTGCTCATGAAGCGCTCCATCACGGCACCGCTGGCCGCCCACATCTCCTTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp GTGGGGCTGGTAGCCGCGGTTCACCAGCTTGGTCACCACTTTGAAGAGAAAGTGGGGCTCAGCTTCTGGTaGGAGAGCCCCCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: VGLVAAVHQLGHHFEEKVGLSFW*ESPQHH
Trigger: ATGGTGCTGGGGGCTCTCTCACCAGAAGCTGAGCCC...CACTTTCTCTTCAAAGTGGTGACCAAGCTGGTGAACCGCGGCTACCAGCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp GGAGATGTGGGCGGCCAGCGGTGCCGTGATGGAGCGCTTCATGAGCACGGGCAGTGTCTTCCTGTGAGTTaGGAGGCCAATTTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: GDVGGQRCRDGALHEHGQCLPVS*EANLER
Trigger: TCTCTCCAAATTGGCCTCTCAACTCACAGGAAGACA...CTGCCCGTGCTCATGAAGCGCTCCATCACGGCACCGCTGGCCGCCCACATCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp GCCGCAGTGCCTCATAGTGCGCCTCCAGGTGCAGCTCCACGAAGAAGTAGTCGAGCTGCATCTCGTGCTTaGACAGCTGCAGCTGACGGA +
Preference number: 4 (lower is better)
Translates to: AAVPHSAPPGAAPRRSSRAASRA*TAAADG
Trigger: TCCGTCAGCTGCAGCTGTTCAAGCACGAGATGCAGC...TCGACTACTTCTTCGTGGAGCTGCACCTGGAGGCGCACTATGAGGCACTGCGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp AACTTGAGCACGAGGCTGAAGATGCTGTGGATGACGTTCATGACGGGCGCCGCCAGGTCGTCGAACAGCTaGGTGATGCTGGCCATGCCC +
Preference number: 4 (lower is better)
Translates to: NLSTRLKMLWMTFMTGAARSSNS*VMLAMP
Trigger: GGGCATGGCCAGCATCACGCAGCTGTTCGACGACCT...GGCGGCGCCCGTCATGAACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp AACTTGAGCACGAGGCTGAAGATGCTGTGGATGACGTTCATGACGGGCGCCGCCCTGCTCCCGACGAGCTaGCTCTGCAGAGAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: NLSTRLKMLWMTFMTGAALLPTS*LCRELA
Trigger: AGCAAGCTCTCTGCAGAGGCAGCTCGTCGGGAGCAG...GGCGGCGCCCGTCATGAACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp ACAGAGTTCAGCACCAGCGGGTTGAGCAGCTCTCCGGGCGTTTGCCCAGCTCCAGAGAAAACGAAGCCGTaGACTCTCCAGTCGGTGCCT +
Preference number: 4 (lower is better)
Translates to: TEFSTSGLSSSPGVCPAPEKTKP*TLQSVP
Trigger: AGGCACCGACTGGAGAGTGCACGGCTTCGTTTTCTC...TGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAACTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp AGGTGGAAGCAGACGTCCTTGAGCGCCCACATCATGAGCTTCAGCTGCAGCAGGGCTGTAGCCCTGAGCTaGCCAAGCTGCACTCTGCAG +
Preference number: 4 (lower is better)
Translates to: RWKQTSLSAHIMSFSCSRAVALS*PSCTLQ
Trigger: CTGCAGAGTGCAGCTTGGGCAGCTCAGGGCTACAGC...CCTGCTGCAGCTGAAGCTCATGATGTGGGCGCTCAAGGACGTCTGCTTCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp CTGCGGAACTTGAGCACGAGGCTGAAGATGCTGTGGATGACGTTCATGACGGGCCAAGTGGTACTGCCCTaGCAGGCCTGCCAGGTAGGC +
Preference number: 4 (lower is better)
Translates to: LRNLSTRLKMLWMTFMTGQVVLP*QACQVG
Trigger: GCCTACCTGGCAGGCCTGGCAGGGCAGTACCACTTG...GCCCGTCATGAACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTTCCGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp CCCAGCTCCAAGCTTCTCAAAGAGCAGGTCGCTGAGGGACTGGGCGAACTCGCCTGCACTGCAGGGCCTTaGTCAGCACAGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: PSSKLLKEQVAEGLGELACTAGP*SAQSSA
Trigger: TGCTGAACTCTGTGCTGAGCAAGGCCCTGCAGTGCA...GGCGAGTTCGCCCAGTCCCTCAGCGACCTGCTCTTTGAGAAGCTTGGAGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp GGGTTGAGCAGCTCTCCGGGCGTTTGCCCAGCTCCAAGCTTCTCAAAGAGCAGGTGGAGCTCCCCTTGGTaGAGCCTGCAGAACTTGTCG +
Preference number: 4 (lower is better)
Translates to: GLSSSPGVCPAPSFSKSRWSSPW*SLQNLS
Trigger: CGACAAGTTCTGCAGGCTCCACCAAGGGGAGCTCCA...CCTGCTCTTTGAGAAGCTTGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp CACCAAGGAGATGTGGGCGGCCAGCGGTGCCGTGATGGAGCGCTTCATGAGCACGCCTGGCGTCGCTCCTaGTCCTTCACAAATTGTTCT +
Preference number: 4 (lower is better)
Translates to: HQGDVGGQRCRDGALHEHAWRRS*SFTNCS
Trigger: AGAACAATTTGTGAAGGACCAGGAGCGACGCCAGGC...GTGCTCATGAAGCGCTCCATCACGGCACCGCTGGCCGCCCACATCTCCTTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp GTGGGGCTGGTAGCCGCGGTTCACCAGCTTGGTCACCACTTTGAAGAGAAAGTGTGGGGTCAGCAGGCCTaGCCTGTTCCAGCCATCCCA +
Preference number: 4 (lower is better)
Translates to: VGLVAAVHQLGHHFEEKVWGQQA*PVPAIP
Trigger: TGGGATGGCTGGAACAGGCCAGGCCTGCTGACCCCA...CACTTTCTCTTCAAAGTGGTGACCAAGCTGGTGAACCGCGGCTACCAGCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp GCCGCTGTACTTGCTCACGCAGCCCTCGGTGATGACAATGTTGAGAGGCCAGTCTGTGGGGCGGAGGGATaGGTACATGGGTGTTCCACC +
Preference number: 4 (lower is better)
Translates to: AAVLAHAALGDDNVERPVCGAEG*VHGCST
Trigger: GGTGGAACACCCATGTACCCATCCCTCCGCCCCACA...GACTGGCCTCTCAACATTGTCATCACCGAGGGCTGCGTGAGCAAGTACAGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp GTCGCTGAGGGACTGGGCGAACTCGCCGTCCTCCATCAGCAGGAAGTGCCGCAGGTTGAGAGGCCAATTTaGAGAGAGGTCCTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: VAEGLGELAVLHQQEVPQVERPI*REVLSV
Trigger: GACACTGAGGACCTCTCTCCAAATTGGCCTCTCAAC...CTGCGGCACTTCCTGCTGATGGAGGACGGCGAGTTCGCCCAGTCCCTCAGCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp AGCAGGAAGGAGAAGACGCCGCTGTACTTGCTCACGCAGCCCTCGGTGATGACATCCGAAGAGGCTGAATaGCAGGCGGCCTCTCCAATG +
Preference number: 4 (lower is better)
Translates to: SRKEKTPLYLLTQPSVMTSEEAE*QAASPM
Trigger: CATTGGAGAGGCCGCCTGTCATTCAGCCTCTTCGGA...TGTCATCACCGAGGGCTGCGTGAGCAAGTACAGCGGCGTCTTCTCCTTCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp AGGTGGAAGCAGACGTCCTTGAGCGCCCACATCATGAGCTTCAGCTGCAGCAGGAGAGAAAACCAATGGTaGGGAGGCTCAGGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: RWKQTSLSAHIMSFSCSRRENQW*GGSGWA
Trigger: CGCCCACCCTGAGCCTCCTCACCATTGGTTTTCTCT...CCTGCTGCAGCTGAAGCTCATGATGTGGGCGCTCAAGGACGTCTGCTTCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp ACAGAGTTCAGCACCAGCGGGTTGAGCAGCTCTCCGGGCGTTTGCCCAGCTCCATGTTCTTTCAGCCTCTaGAACTGCTCACGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: TEFSTSGLSSSPGVCPAPCSFSL*NCSRFR
Trigger: CCGGAAGCGTGAGCAGTTTCAGAGGCTGAAAGAACA...TGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAACTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp GATGAGCTGGCTGCGGAACTTGAGCACGAGGCTGAAGATGCTGTGGATGACGTTTCTGTGCTCCCAGGCTaGGCGCTGACTGGGACGTGT +
Preference number: 4 (lower is better)
Translates to: DELAAELEHEAEDAVDDVSVLPG*ALTGTC
Trigger: ACACGTCCCAGTCAGCGCTCAGCCTGGGAGCACAGA...AACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTTCCGCAGCCAGCTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp TTGCTCACGCAGCCCTCGGTGATGACAATGTTGAGAGGCCAGTCCACCTTGTACCAAAGAGCAGGTCGCTaGGGGACTGGGCGAACTCGC +
Preference number: 4 (lower is better)
Translates to: LLTQPSVMTMLRGQSTLYQRAGR*GTGRTR
Trigger: GCGAGTTCGCCCAGTCCCTCAGCGACCTGCTCTTTG...GTACAAGGTGGACTGGCCTCTCAACATTGTCATCACCGAGGGCTGCGTGAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp AGGTGGAAGCAGACGTCCTTGAGCGCCCACATCATGAGCTTCAGCTGCAGCAGGTTGAACAGCTGCAGCTaGCGGAACTGCACAGAGCCG +
Preference number: 4 (lower is better)
Translates to: RWKQTSLSAHIMSFSCSRLNSCS*RNCTEP
Trigger: CGGCTCTGTGCAGTTCCGTCAGCTGCAGCTGTTCAA...CCTGCTGCAGCTGAAGCTCATGATGTGGGCGCTCAAGGACGTCTGCTTCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp ACAGAGTTCAGCACCAGCGGGTTGAGCAGCTCTCCGGGCGTTTGCCCAGCTCCACGATGTAGCCCTGGATaGCCTTCACGAAATGCTGCA +
Preference number: 4 (lower is better)
Translates to: TEFSTSGLSSSPGVCPAPRCSPG*PSRNAA
Trigger: TGCAGCATTTCGTGAAGGTCATCCAGGGCTACATCG...TGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAACTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp TTGCTCACGCAGCCCTCGGTGATGACAATGTTGAGAGGCCAGTCCACCTTGTACAGGGGGACCACTCCCTaGCAGCTGAACCAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: LLTQPSVMTMLRGQSTLYRGTTP*QLNQEV
Trigger: GACCTCCTGGTTCAGCTGGCAGGGAGTGGTCCCCCT...GTACAAGGTGGACTGGCCTCTCAACATTGTCATCACCGAGGGCTGCGTGAGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp GCCGCAGTGCCTCATAGTGCGCCTCCAGGTGCAGCTCCACGAAGAAGTAGTCGAGGTAGTGCTCGTTGCTaGAGTTGTGCAGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: AAVPHSAPPGAAPRRSSRGSARC*SCAEPP
Trigger: AGGAGGCTCTGCACAACTGCAGCAACGAGCACTACC...TCGACTACTTCTTCGTGGAGCTGCACCTGGAGGCGCACTATGAGGCACTGCGGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp ACCTTTATTGTGCACGTCCCCCGCAGAGCAGCCTCAGGCGTCCTGGTAGTAGTTCAGGACCCTGGATGCTaGTTCCCGGGCATGAGCGAT +
Preference number: 4 (lower is better)
Translates to: TFIVHVPRRAASGVLVVVQDPGC*FPGMSD
Trigger: ATCGCTCATGCCCGGGAAGCAGCATCCAGGGTCCTG...AACTACTACCAGGACGCCTGAGGCTGCTCTGCGGGGGACGTGCACAATAAAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp GTTTGCCCAGCTCCAAGCTTCTCAAAGAGCAGGTCGCTGAGGGACTGGGCGAACCCGACGAGCTGCCTCTaGAGAGAGCTTGCTGTAGTG +
Preference number: 4 (lower is better)
Translates to: VCPAPSFSKSRSLRDWANPTSCL*RELAVV
Trigger: CACTACAGCAAGCTCTCTGCAGAGGCAGCTCGTCGG...GTTCGCCCAGTCCCTCAGCGACCTGCTCTTTGAGAAGCTTGGAGCTGGGCAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp GTCGCTGAGGGACTGGGCGAACTCGCCGTCCTCCATCAGCAGGAAGTGCCGCAGGTGAGCCTCAGACACTaGTTTCAGCATCTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: VAEGLGELAVLHQQEVPQVSLRH*FQHLLN
Trigger: ATTCAGGAGATGCTGAAAGCAGTGTCTGAGGCTCAC...CTGCGGCACTTCCTGCTGATGGAGGACGGCGAGTTCGCCCAGTCCCTCAGCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp AGCTGGCTGCGGAACTTGAGCACGAGGCTGAAGATGCTGTGGATGACGTTCATGCCAGGAGAGGGACCATaGCAGTCTGCACGGACGGCT +
Preference number: 4 (lower is better)
Translates to: SWLRNLSTRLKMLWMTFMPGEGP*QSARTA
Trigger: AGCCGTCCGTGCAGACTGGCATGGTCCCTCTCCTGG...CATGAACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTTCCGCAGCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp GGGTTGAGCAGCTCTCCGGGCGTTTGCCCAGCTCCAAGCTTCTCAAAGAGCAGGAGCAACTCGCTCAGCTaGACAGCAGTCTCATCAGCG +
Preference number: 4 (lower is better)
Translates to: GLSSSPGVCPAPSFSKSRSNSLS*TAVSSA
Trigger: CGCTGATGAGACTGCTGTGCAGCTGAGCGAGTTGCT...CCTGCTCTTTGAGAAGCTTGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp ACCTTTATTGTGCACGTCCCCCGCAGAGCAGCCTCAGGCGTCCTGGTAGTAGTTCAGGAAGTGCCGCAGTaGCTCATAGTGCGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: TFIVHVPRRAASGVLVVVQEVPQ*LIVRLQ
Trigger: CTGGAGGCGCACTATGAGGCACTGCGGCACTTCCTG...AACTACTACCAGGACGCCTGAGGCTGCTCTGCGGGGGACGTGCACAATAAAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp ACAGAGTTCAGCACCAGCGGGTTGAGCAGCTCTCCGGGCGTTTGCCCAGCTCCAAGAACACCTTTATTGTaGACGTCCCCCGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: TEFSTSGLSSSPGVCPAPRTPLL*TSPAEQ
Trigger: CTGCTCTGCGGGGGACGTGCACAATAAAGGTGTTCT...TGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAACTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp TTGTACCTGAGCTCCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCACGCTGGGCTCAGACTaGGAATCAGGAGTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: LYLSSRQLSTSGALGANTTLGSD*ESGVKL
Trigger: CAACTTGACTCCTGATTCCCAGTCTGAGCCCAGCGT...GGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGGAGCTCAGGTACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp ACCTTTATTGTGCACGTCCCCCGCAGAGCAGCCTCAGGCGTCCTGGTAGTAGTTTTGCTGACAGAGCTGTaGCGGGCCACCCTCTCCATG +
Preference number: 4 (lower is better)
Translates to: TFIVHVPRRAASGVLVVVLLTEL*RATLSM
Trigger: CATGGAGAGGGTGGCCCGCCACAGCTCTGTCAGCAA...AACTACTACCAGGACGCCTGAGGCTGCTCTGCGGGGGACGTGCACAATAAAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp AGGTGGAAGCAGACGTCCTTGAGCGCCCACATCATGAGCTTCAGCTGCAGCAGGTTCTACAGGCAGCCGTaGCCCACAGTCCAGCACAGT +
Preference number: 4 (lower is better)
Translates to: RWKQTSLSAHIMSFSCSRFYRQP*PTVQHS
Trigger: ACTGTGCTGGACTGTGGGCCACGGCTGCCTGTAGAA...CCTGCTGCAGCTGAAGCTCATGATGTGGGCGCTCAAGGACGTCTGCTTCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp GTTCAGCACCAGCGGGTTGAGCAGCTCTCCGGGCGTTTGCCCAGCTCCAAGCTTGCAGCCTCCATAACCTaGAGTGTTTCCTGGATCATG +
Preference number: 4 (lower is better)
Translates to: VQHQRVEQLSGRLPSSKLAASIT*SVSWIM
Trigger: CATGATCCAGGAAACACTTCAGGTTATGGAGGCTGC...AAGCTTGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp CACCAAGGAGATGTGGGCGGCCAGCGGTGCCGTGATGGAGCGCTTCATGAGCACAGTGGGAGTAGTACTTaGAGGTGTTGTAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: HQGDVGGQRCRDGALHEHSGSST*RCCRTA
Trigger: AGCAGTCCTACAACACCTTCAAGTACTACTCCCACT...GTGCTCATGAAGCGCTCCATCACGGCACCGCTGGCCGCCCACATCTCCTTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp GCCGCAGTGCCTCATAGTGCGCCTCCAGGTGCAGCTCCACGAAGAAGTAGTCGAGGAACACGAGGCCCTTaGTGTACAAAGAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: AAVPHSAPPGAAPRRSSRGTRGP*CTKSPG
Trigger: TCCTGGACTCTTTGTACAGCAAGGGCCTCGTGTTCC...TCGACTACTTCTTCGTGGAGCTGCACCTGGAGGCGCACTATGAGGCACTGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp GCCGCTGTACTTGCTCACGCAGCCCTCGGTGATGACAATGTTGAGAGGCCAGTCGCCAGGTACCTGAGCTaGCGGCCAAGTTTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: AAVLAHAALGDDNVERPVARYLS*RPSFLK
Trigger: CTTCAAGAAACTTGGCCGGCAGCTCAGGTACCTGGC...GACTGGCCTCTCAACATTGTCATCACCGAGGGCTGCGTGAGCAAGTACAGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp AACTTGAGCACGAGGCTGAAGATGCTGTGGATGACGTTCATGACGGGCGCCGCCAGGCGAGTGTTGCTCTaGAGACCCAGAATCACAGCC +
Preference number: 4 (lower is better)
Translates to: NLSTRLKMLWMTFMTGAARRVLL*RPRITA
Trigger: GGCTGTGATTCTGGGTCTGCAGAGCAACACTCGCCT...GGCGGCGCCCGTCATGAACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp CTGCGGAACTTGAGCACGAGGCTGAAGATGCTGTGGATGACGTTCATGACGGGCTCGCACCAGGTGACGTaGAGGATCTGGTTGGCGATG +
Preference number: 4 (lower is better)
Translates to: LRNLSTRLKMLWMTFMTGSHQVT*RIWLAM
Trigger: CATCGCCAACCAGATCCTGCACGTCACCTGGTGCGA...GCCCGTCATGAACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTTCCGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp TTGCTCACGCAGCCCTCGGTGATGACAATGTTGAGAGGCCAGTCCACCTTGTACCGTCTGGGGTCACGCTaGGCTCAGACTGGGAATCAG +
Preference number: 4 (lower is better)
Translates to: LLTQPSVMTMLRGQSTLYRLGSR*AQTGNQ
Trigger: CTGATTCCCAGTCTGAGCCCAGCGTGACCCCAGACG...GTACAAGGTGGACTGGCCTCTCAACATTGTCATCACCGAGGGCTGCGTGAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp CACCTTTATTGTGCACGTCCCCCGCAGAGCAGCCTCAGGCGTCCTGGTAGTAGTGGCAGAGCGAAAACGTaGCAGACACGACCCCAATCA +
Preference number: 4 (lower is better)
Translates to: HLYCARPPQSSLRRPGSSGRAKT*QTRPQS
Trigger: TGATTGGGGTCGTGTCTGCCACGTTTTCGCTCTGCC...ACTACTACCAGGACGCCTGAGGCTGCTCTGCGGGGGACGTGCACAATAAAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp GATGAGCTGGCTGCGGAACTTGAGCACGAGGCTGAAGATGCTGTGGATGACGTTCCACTGGTGAAGGCCTaGAACACGAGGCCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: DELAAELEHEAEDAVDDVPLVKA*NTRPLL
Trigger: CAGCAAGGGCCTCGTGTTCCAGGCCTTCACCAGTGG...AACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTTCCGCAGCCAGCTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp AACTTGAGCACGAGGCTGAAGATGCTGTGGATGACGTTCATGACGGGCGCCGCCAAAGTCGTACTCCTGTaGCCTGGAGGGCTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: NLSTRLKMLWMTFMTGAAKVVLL*PGGLSA
Trigger: AGCACTCAGCCCTCCAGGCCACAGGAGTACGACTTT...GGCGGCGCCCGTCATGAACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp TTGCTCACGCAGCCCTCGGTGATGACAATGTTGAGAGGCCAGTCCACCTTGTACTGGGCGGCTCGGACATaGACTCGTAACTGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: LLTQPSVMTMLRGQSTLYWAART*TRNCPG
Trigger: ACCCGGACAGTTACGAGTCCATGTCCGAGCCGCCCA...GTACAAGGTGGACTGGCCTCTCAACATTGTCATCACCGAGGGCTGCGTGAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp GTTCAGCACCAGCGGGTTGAGCAGCTCTCCGGGCGTTTGCCCAGCTCCAAGCTTTCCTGGATCATGCTGTaGCACAAACACTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: VQHQRVEQLSGRLPSSKLSWIML*HKHSSL
Trigger: CAGAGAAGAGTGTTTGTGTCACAGCATGATCCAGGA...AAGCTTGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp GCCGCAGTGCCTCATAGTGCGCCTCCAGGTGCAGCTCCACGAAGAAGTAGTCGAACTTATCTCGGAAGCTaGGGTACTCGTGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: AAVPHSAPPGAAPRRSSRTYLGS*GTRGSP
Trigger: AGGTGAACCACGAGTACCTCAGCTTCCGAGATAAGT...TCGACTACTTCTTCGTGGAGCTGCACCTGGAGGCGCACTATGAGGCACTGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp AGGTGGAAGCAGACGTCCTTGAGCGCCCACATCATGAGCTTCAGCTGCAGCAGGCCAGCCACCCTACTCTaGCCTAGTTCTTCAGAGACA +
Preference number: 4 (lower is better)
Translates to: RWKQTSLSAHIMSFSCSRPATLL*PSSSET
Trigger: TGTCTCTGAAGAACTAGGTCAGAGTAGGGTGGCTGG...CCTGCTGCAGCTGAAGCTCATGATGTGGGCGCTCAAGGACGTCTGCTTCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp AAGACGCCGCTGTACTTGCTCACGCAGCCCTCGGTGATGACAATGTTGAGAGGCAGGCGGCCTCTCCAATaGCGAAGCTCAGAACTGGTA +
Preference number: 4 (lower is better)
Translates to: KTPLYLLTQPSVMTMLRGRRPLQ*RSSELV
Trigger: TACCAGTTCTGAGCTTCGGCATTGGAGAGGCCGCCT...GCCTCTCAACATTGTCATCACCGAGGGCTGCGTGAGCAAGTACAGCGGCGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp AGCTGGCTGCGGAACTTGAGCACGAGGCTGAAGATGCTGTGGATGACGTTCATGTCTTCCGGTTCACACTaGGCTGGCCCAGGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: SWLRNLSTRLKMLWMTFMSSGSH*AGPGES
Trigger: AGACTCACCTGGGCCAGCGCAGTGTGAACCGGAAGA...CATGAACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTTCCGCAGCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp GACGTCCTTGAGCGCCCACATCATGAGCTTCAGCTGCAGCAGGAAGGAGAAGACCTTGAGGCTCCGCTTTaGCCTCTTCCGGTTCACACT +
Preference number: 4 (lower is better)
Translates to: DVLERPHHELQLQQEGEDLEAPL*PLPVHT
Trigger: AGTGTGAACCGGAAGAGGGCAAAGCGGAGCCTCAAG...GTCTTCTCCTTCCTGCTGCAGCTGAAGCTCATGATGTGGGCGCTCAAGGACGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp ACCTTTATTGTGCACGTCCCCCGCAGAGCAGCCTCAGGCGTCCTGGTAGTAGTTCAGGGTAGTGCTCGTTaGTGCAGTTGTGCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: TFIVHVPRRAASGVLVVVQGSAR*CSCAEP
Trigger: AGGCTCTGCACAACTGCAGCAACGAGCACTACCCTG...AACTACTACCAGGACGCCTGAGGCTGCTCTGCGGGGGACGTGCACAATAAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp AAGACGCCGCTGTACTTGCTCACGCAGCCCTCGGTGATGACAATGTTGAGAGGCCAGGCAGGCGAGTGTTaGTCTGCAGACCCAGAATCA +
Preference number: 4 (lower is better)
Translates to: KTPLYLLTQPSVMTMLRGQAGEC*SADPES
Trigger: TGATTCTGGGTCTGCAGAGCAACACTCGCCTGCCTG...GCCTCTCAACATTGTCATCACCGAGGGCTGCGTGAGCAAGTACAGCGGCGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp AGCTGGCTGCGGAACTTGAGCACGAGGCTGAAGATGCTGTGGATGACGTTCATGAGCTCTCCGGGCGTTTaGCCAGCTCCAAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SWLRNLSTRLKMLWMTFMSSPGV*PAPSFS
Trigger: TGAGAAGCTTGGAGCTGGGCAAACGCCCGGAGAGCT...CATGAACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTTCCGCAGCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp ACAGAGTTCAGCACCAGCGGGTTGAGCAGCTCTCCGGGCGTTTGCCCAGCTCCAAGTCAAAGGACAACATaGGGATCTTGTTTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: TEFSTSGLSSSPGVCPAPSQRTT*GSCFSL
Trigger: CAGCGAGAAACAAGATCCTCATGTTGTCCTTTGACT...TGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAACTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp CTGCGGAACTTGAGCACGAGGCTGAAGATGCTGTGGATGACGTTCATGACGGGCATCCGTTCTGACATCTaGCGGTCACTCAGTGCACTC +
Preference number: 4 (lower is better)
Translates to: LRNLSTRLKMLWMTFMTGIRSDI*RSLSAL
Trigger: GAGTGCACTGAGTGACCGGCAGATGTCAGAACGGAT...GCCCGTCATGAACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTTCCGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp TCCGAGAACACCTTTATTGTGCACGTCCCCCGCAGAGCAGCCTCAGGCGTCCTGACCTTCACGAAATGCTaGATCTCGTGCTTGAACAGC +
Preference number: 4 (lower is better)
Translates to: SENTFIVHVPRRAASGVLTFTKC*ISCLNS
Trigger: GCTGTTCAAGCACGAGATGCAGCATTTCGTGAAGGT...CAGGACGCCTGAGGCTGCTCTGCGGGGGACGTGCACAATAAAGGTGTTCTCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp TTGTACCTGAGCTCCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCATGACCTTCACGAAATaGTGCATCTCGTGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: LYLSSRQLSTSGALGANTMTFTK*CISCLN
Trigger: GTTCAAGCACGAGATGCAGCATTTCGTGAAGGTCAT...GGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGGAGCTCAGGTACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439308.6
3UTR CAA 72 bp TTCAGCTGCAGCAGGAAGGAGAAGACGCCGCTGTACTaGCTCACGCAGCCCTCGGTGATGACAATGTTGAGA +
Preference number: 4 (lower is better)
Translates to: FSCSRKEKTPLY*LTQPSVMTMLR
Trigger: TCTCAACATTGTCATCACCGAGGGCTGCGTGAGCAAGTACAGCGGCGTCTTCTCCTTCCTGCTGCAGCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp GACGTCCTTGAGCGCCCACATCATGAGCTTCAGCTGCAGCAGGAAGGAGAAGACAGTCAAGTTGGACGCTaGCTGGAATCCTTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: DVLERPHHELQLQQEGEDSQVGR*LESFVF
Trigger: GAAGACGAAGGATTCCAGTCAGCGTCCAACTTGACT...GTCTTCTCCTTCCTGCTGCAGCTGAAGCTCATGATGTGGGCGCTCAAGGACGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp AGCAGGAAGGAGAAGACGCCGCTGTACTTGCTCACGCAGCCCTCGGTGATGACAGCTTGGTCACCACTTTaGAGAGAAAGTGGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: SRKEKTPLYLLTQPSVMTAWSPL*RESGSS
Trigger: ACTACTCCCACTTTCTCTTCAAAGTGGTGACCAAGC...TGTCATCACCGAGGGCTGCGTGAGCAAGTACAGCGGCGTCTTCTCCTTCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp ACAGAGTTCAGCACCAGCGGGTTGAGCAGCTCTCCGGGCGTTTGCCCAGCTCCAACAAACACTCTTCTCTaGAGATCAGAGACTGAACGT +
Preference number: 4 (lower is better)
Translates to: TEFSTSGLSSSPGVCPAPTNTLL*RSETER
Trigger: ACGTTCAGTCTCTGATCTCCAGAGAAGAGTGTTTGT...TGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAACTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp ACCTTTATTGTGCACGTCCCCCGCAGAGCAGCCTCAGGCGTCCTGGTAGTAGTTAGGAGGTCTTGCGGTTaGTCTACTCAGAGTAAACAC +
Preference number: 4 (lower is better)
Translates to: TFIVHVPRRAASGVLVVVRRSCG*STQSKH
Trigger: GTGTTTACTCTGAGTAGAGCAACCGCAAGACCTCCT...AACTACTACCAGGACGCCTGAGGCTGCTCTGCGGGGGACGTGCACAATAAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp GGGTTGAGCAGCTCTCCGGGCGTTTGCCCAGCTCCAAGCTTCTCAAAGAGCAGGGTGTTTCCTGGATCATaGTGTGACACAAACACTCTT +
Preference number: 4 (lower is better)
Translates to: GLSSSPGVCPAPSFSKSRVFPGS*CDTNTL
Trigger: AAGAGTGTTTGTGTCACAGCATGATCCAGGAAACAC...CCTGCTCTTTGAGAAGCTTGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR GCA 90 bp CGCAGAGCAGCCTCAGGCGTCCTGGTAGTAGTTGTTGAAGTTGATGCGCAGCAGATGTCGTGGGCAATGTaGTTCAGAAACACGGGAACA +
Preference number: 4 (lower is better)
Translates to: RRAASGVLVVVVEVDAQQMSWAM*FRNTGT
Trigger: TGTTCCCGTGTTTCTGAAGCACATTGCCCACGACAT...CTGCTGCGCATCAACTTCAACAACTACTACCAGGACGCCTGAGGCTGCTCTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp AAGACGCCGCTGTACTTGCTCACGCAGCCCTCGGTGATGACAATGTTGAGAGGCGGAGTCACAGAACCGTaGCAAAACCGAAGAACGAAA +
Preference number: 4 (lower is better)
Translates to: KTPLYLLTQPSVMTMLRGGVTEP*QNRRTK
Trigger: TTTCGTTCTTCGGTTTTGCCACGGTTCTGTGACTCC...GCCTCTCAACATTGTCATCACCGAGGGCTGCGTGAGCAAGTACAGCGGCGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp GATGAGCTGGCTGCGGAACTTGAGCACGAGGCTGAAGATGCTGTGGATGACGTTAAGTTGGACGCTGACTaGAATCCTTCGTCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: DELAAELEHEAEDAVDDVKLDAD*NPSSSH
Trigger: GTGGGAAGACGAAGGATTCCAGTCAGCGTCCAACTT...AACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTTCCGCAGCCAGCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp GAGCTGGCTGCGGAACTTGAGCACGAGGCTGAAGATGCTGTGGATGACGTTCATGCTGCTTCCCGGGCATaGGCGATTAATTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: ELAAELEHEAEDAVDDVHAASRA*AINSCF
Trigger: AAAACAAGAATTAATCGCTCATGCCCGGGAAGCAGC...ATGAACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTTCCGCAGCCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp CGCAGAGCAGCCTCAGGCGTCCTGGTAGTAGTTGTTGAAGTTGATGCGCAGCAGAATCAGGAGTCAAGTTaGACGCTGACTGGAATCCTT +
Preference number: 4 (lower is better)
Translates to: RRAASGVLVVVVEVDAQQNQESS*TLTGIL
Trigger: AAGGATTCCAGTCAGCGTCCAACTTGACTCCTGATT...CTGCTGCGCATCAACTTCAACAACTACTACCAGGACGCCTGAGGCTGCTCTGCG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR TCA 90 bp CGCAGAGCAGCCTCAGGCGTCCTGGTAGTAGTTGTTGAAGTTGATGCGCAGCAGGCTTTCAGCATCTCCTaGATGTGTTTCTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: RRAASGVLVVVVEVDAQQAFSIS*MCFSSS
Trigger: AGAAGATGAGAAACACATTCAGGAGATGCTGAAAGC...CTGCTGCGCATCAACTTCAACAACTACTACCAGGACGCCTGAGGCTGCTCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CCA 90 bp GATGAGCTGGCTGCGGAACTTGAGCACGAGGCTGAAGATGCTGTGGATGACGTTCAGACGTATATGTCGTaGGCAATGTGCTTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: DELAAELEHEAEDAVDDVQTYMS*AMCFRN
Trigger: GTTTCTGAAGCACATTGCCCACGACATATACGTCTG...AACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTTCCGCAGCCAGCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS GCA 90 bp GCCTGCCAGGTAGGCCTGCTCCCCACCCTGAGCCTCCGCCGCCGATaGCTCCGCCTCCTCACCACGGCCTGGGCTGCTCTGGGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: ACQVGLLPTLSLRRR*LRLLTTAWAALGSC
Trigger: ACAGCTGCCCAGAGCAGCCCAGGCCGTGGTGAGGAGGCGGAGGCATCGGCGGCGGAGGCTCAGGGTGGGGAGCAGGCCTACCTGGCAGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248846.10
ENST00000425018.1
ENST00000439308.6
ENST00000491449.5
ENST00000498611.5
CDS GCA 90 bp CTGGCCTGCACGTCCACCCGTTCTCCAGGCCTCACCCGTGGAAAGTaGCCACGGCTGCCGCTCTCGCCGCCTCCGTCGCGTCACAGCCGC +
Preference number: 5 (lower is better)
Translates to: LACTSTRSPGLTRGK*PRLPLSPPPSRHSR
Trigger: GCGGCTGTGACGCGACGGAGGCGGCGAGAGCGGCAGCCGTGGGCACTTTCCACGGGTGAGGCCTGGAGAACGGGTGGACGTGCAGGCCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248846.10
CDS GCA 90 bp GCTTCACGCCGGTGGGAAACGCGGCCCTGGGGCCTCCTCCACAGGTaGCCGGGAGCACAGCGCCAACGCCACAGAGCTCGGCCAGGTACC +
Preference number: 5 (lower is better)
Translates to: ASRRWETRPWGLLHR*PGAQRQRHRARPGT
Trigger: GGTACCTGGCCGAGCTCTGTGGCGTTGGCGCTGTGCTCCCGGGCACCTGTGGAGGAGGCCCCAGGGCCGCGTTTCCCACCGGCGTGAAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000434349.1
ENST00000439308.6
ENST00000498611.5
CDS CCA 90 bp GCCAGGAGAGGGTGCCACTCCGAGGGTCGTGGGCAGCGGAGAGTCTaGGGGCTCAGCCGGGTGGGTCCCGGGTTCTGGCCTGCACGTCCA +
Preference number: 5 (lower is better)
Translates to: ARRGCHSEGRGQRRV*GLSRVGPGFWPARP
Trigger: TGGACGTGCAGGCCAGAACCCGGGACCCACCCGGCTGAGCCCCCAGACTCTCCGCTGCCCACGACCCTCGGAGTGGCACCCTCTCCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000498611.5
CDS CCA 90 bp CCGGGTTCTGGCCTGCACGTCCACCCGTTCTCCAGGCCTCACCCGTaGAAAGTGCCCACGGCTGCCGCTCTCGCCGCCTCCGTCGCGTCA +
Preference number: 5 (lower is better)
Translates to: PGSGLHVHPFSRPHP*KVPTAAALAASVAS
Trigger: TGACGCGACGGAGGCGGCGAGAGCGGCAGCCGTGGGCACTTTCCACGGGTGAGGCCTGGAGAACGGGTGGACGTGCAGGCCAGAACCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248846.10
CDS CCA 90 bp ACTCCGAGGGTCGTGGGCAGCGGAGAGTCTGGGGGCTCAGCCGGGTaGGTCCCGGGTTCTGGCCTGCACGTCCACCCGTTCTCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: TPRVVGSGESGGSAG*VPGSGLHVHPFSRP
Trigger: AGGCCTGGAGAACGGGTGGACGTGCAGGCCAGAACCCGGGACCCACCCGGCTGAGCCCCCAGACTCTCCGCTGCCCACGACCCTCGGAGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000498611.5
CDS TCA 90 bp TGGCAGCCGGCAGGAGGGCCTCACACAGGTCGTCGAACAGCTGCGTaGTGCTGGCCATGCCCCTTCTCAGCTCCGGGCCCCCGGCGTGTG +
Preference number: 5 (lower is better)
Translates to: WQPAGGPHTGRRTAA*CWPCPFSAPGPRRV
Trigger: CACACGCCGGGGGCCCGGAGCTGAGAAGGGGCATGGCCAGCATCACGCAGCTGTTCGACGACCTGTGTGAGGCCCTCCTGCCGGCTGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000498611.5
CDS GCA 90 bp GCGGAGAGTCTGGGGGCTCAGCCGGGTGGGTCCCGGGTTCTGGCCTaGACGTCCACCCGTTCTCCAGGCCTCACCCGTGGAAAGTGCCCA +
Preference number: 5 (lower is better)
Translates to: AESLGAQPGGSRVLA*TSTRSPGLTRGKCP
Trigger: TGGGCACTTTCCACGGGTGAGGCCTGGAGAACGGGTGGACGTGCAGGCCAGAACCCGGGACCCACCCGGCTGAGCCCCCAGACTCTCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248846.10
ENST00000498611.5
CDS GCA 90 bp GCACCCGTTCTTCGGGACCCACGAGAGGAGACGGCCAGGAGAGGGTaGCACTCCGAGGGTCGTGGGCAGCGGAGAGTCTGGGGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: APVLRDPREETARRG*HSEGRGQRRVWGLS
Trigger: GCTGAGCCCCCAGACTCTCCGCTGCCCACGACCCTCGGAGTGGCACCCTCTCCTGGCCGTCTCCTCTCGTGGGTCCCGAAGAACGGGTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000498611.5
CDS-3UTR CAA 90 bp CTGAGCTCCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCTCGGGCAGAGCGAGGGAGAGGTaGGAGGCGTGCGGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: LSSRQLSTSGALGANTSGRARER*EACGVS
Trigger: GGACACCCCGCACGCCTCCAACCTCTCCCTCGCTCT...GCCCGAGGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGGAGCTCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS TCA 90 bp CGGACGGCTCAGCCCCTGGGCCCACAGGTAGGAAGTCTCCAATGCTaGGGCTGTCAGAGAAGGGTCTGGCCCCCTCCGCCTGCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: RTAQPLGPQVGSLQC*GCQRRVWPPPPAAA
Trigger: GGCTGCAGCAGGCGGAGGGGGCCAGACCCTTCTCTGACAGCCTCAGCATTGGAGACTTCCTACCTGTGGGCCCAGGGGCTGAGCCGTCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000491449.5
ENST00000498611.5
CDS GCA 90 bp CATGACGGGCGCCGCCTGAAGACGGCCTTGTGCAGGTACTCTGCGTaGGCACGCTGGATCTCCTCCAGGTCGCCCACGGTGGCCAACCTG +
Preference number: 5 (lower is better)
Translates to: HDGRRLKTALCRYSA*ARWISSRSPTVANL
Trigger: CAGGTTGGCCACCGTGGGCGACCTGGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCCGTCTTCAGGCGGCGCCCGTCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425018.1
CDS GCA 90 bp GCCGCTGCCCAGGCCTCACCTGAAGACGGCCTTGTGCAGGTACTCTaGGTGCGCACGCTGGATCTCCTCCAGGTCGCCCACGGTGGCCAA +
Preference number: 5 (lower is better)
Translates to: AAAQASPEDGLVQVL*VRTLDLLQVAHGGQ
Trigger: TTGGCCACCGTGGGCGACCTGGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCCGTCTTCAGGTGAGGCCTGGGCAGCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498611.5
CDS GCA 90 bp ACAGGGACGCAGCCGCTGCCCAGGCCTCACCTGAAGACGGCCTTGTaGAGGTACTCTGCGTGCGCACGCTGGATCTCCTCCAGGTCGCCC +
Preference number: 5 (lower is better)
Translates to: TGTQPLPRPHLKTAL*RYSACARWISSRSP
Trigger: GGGCGACCTGGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCCGTCTTCAGGTGAGGCCTGGGCAGCGGCTGCGTCCCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498611.5
CDS CCA 90 bp TCCGAGAGCAGGCTGCTGATGCTCTCGGGAGACGCTCCTGACACGTaGACGCCCCGCTTCACCACAAAGGCCTGGGCCGGCTGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: SESRLLMLSGDAPDT*TPRFTTKAWAGWQS
Trigger: GCTCTGCCAGCCGGCCCAGGCCTTTGTGGTGAAGCGGGGCGTCCACGTGTCAGGAGCGTCTCCCGAGAGCATCAGCAGCCTGCTCTCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000434349.1
ENST00000439308.6
ENST00000498611.5
CDS CCA 90 bp CTGTGGGAAGACCACCCCCTGACACCTGCCCAAAGAGCCGCTCTGTaGGCTGGCTGCTCCCCTCCTCCAGAGCAGCACGCCTGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: LWEDHPLTPAQRAAL*AGCSPPPEQHAWVG
Trigger: ACCCACCCAGGCGTGCTGCTCTGGAGGAGGGGAGCAGCCAGCCCACAGAGCGGCTCTTTGGGCAGGTGTCAGGGGGTGGTCTTCCCACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000491449.5
CDS CCA 90 bp CGCCGCCTGAAGACGGCCTTGTGCAGGTACTCTGCGTGCGCACGCTaGATCTCCTCCAGGTCGCCCACGGTGGCCAACCTGGCCCTGAAC +
Preference number: 5 (lower is better)
Translates to: RRLKTALCRYSACAR*ISSRSPTVANLALN
Trigger: GTTCAGGGCCAGGTTGGCCACCGTGGGCGACCTGGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCCGTCTTCAGGCGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425018.1
CDS CCA 90 bp TGTGTGGACACAAGTGGACACGAGGGCATCAGGGCCGAGTGCCTGTaGCGGGTACAGAGCCGAGCCGGCCCTGGCTCAAGCAGCCCCTCC +
Preference number: 5 (lower is better)
Translates to: CVDTSGHEGIRAECL*RVQSRAGPGSSSPS
Trigger: GGAGGGGCTGCTTGAGCCAGGGCCGGCTCGGCTCTGTACCCGCCACAGGCACTCGGCCCTGATGCCCTCGTGTCCACTTGTGTCCACACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491449.5
CDS-3UTR CAA 90 bp CCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCTCGGGCAGGTACTTCCAAACGGTCGGCCTaGGGGCCCAGGCCACCCACT +
Preference number: 5 (lower is better)
Translates to: PGSSAHPGRWGQTPRAGTSKRSA*GPRPPT
Trigger: AGTGGGTGGCCTGGGCCCCAAGGCCGACCGTTTGGA...AGTACCTGCCCGAGGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS GCA 90 bp CATGGACTCGTAACTGTCCGGGTACCGCTCCAAGTGGTACTGCCCTaGCAGGCCTGCCAGGTAGGCCTGCTCCCCACCCTGAGCCTCCGC +
Preference number: 5 (lower is better)
Translates to: HGLVTVRVPLQVVLP*QACQVGLLPTLSLR
Trigger: GCGGAGGCTCAGGGTGGGGAGCAGGCCTACCTGGCAGGCCTGGCAGGGCAGTACCACTTGGAGCGGTACCCGGACAGTTACGAGTCCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248846.10
ENST00000425018.1
ENST00000439308.6
ENST00000491449.5
ENST00000498611.5
CDS GCA 90 bp CTGCCCAGGCCTCACCTGAAGACGGCCTTGTGCAGGTACTCTGCGTaGGCACGCTGGATCTCCTCCAGGTCGCCCACGGTGGCCAACCTG +
Preference number: 5 (lower is better)
Translates to: LPRPHLKTALCRYSA*ARWISSRSPTVANL
Trigger: CAGGTTGGCCACCGTGGGCGACCTGGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCCGTCTTCAGGTGAGGCCTGGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498611.5
CDS CCA 90 bp TCCCAGGCAGGCGAGTGTTGCTCTGCAGACCCAGAATCACAGCCTTaGCCTCCCTCTGGGTGCTCAGGGCCCGGAGACGTGACCTGGGGG +
Preference number: 5 (lower is better)
Translates to: SQAGECCSADPESQP*PPSGCSGPGDVTWG
Trigger: CCCCCAGGTCACGTCTCCGGGCCCTGAGCACCCAGAGGGAGGCCAAGGCTGTGATTCTGGGTCTGCAGAGCAACACTCGCCTGCCTGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000489511.5
ENST00000491449.5
ENST00000498611.5
CDS CCA 90 bp CGAGCTGGGGGAGGACAGAGATGGCCCCACTTCTACAGGCAGCCGTaGCCCACAGTCCAGCACAGTGCTCTGTGCTCCCAGGCTGAGCGC +
Preference number: 5 (lower is better)
Translates to: RAGGGQRWPHFYRQP*PTVQHSALCSQAER
Trigger: GCGCTCAGCCTGGGAGCACAGAGCACTGTGCTGGACTGTGGGCCACGGCTGCCTGTAGAAGTGGGGCCATCTCTGTCCTCCCCCAGCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000491449.5
CDS CCA 90 bp GGTCCTCAGTGTCCCCGCTCCTCCCAGGGCCTGTGTGGACACAAGTaGACACGAGGGCATCAGGGCCGAGTGCCTGTGGCGGGTACAGAG +
Preference number: 5 (lower is better)
Translates to: GPQCPRSSQGLCGHK*TRGHQGRVPVAGTE
Trigger: CTCTGTACCCGCCACAGGCACTCGGCCCTGATGCCCTCGTGTCCACTTGTGTCCACACAGGCCCTGGGAGGAGCGGGGACACTGAGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491449.5
CDS-3UTR CAA 90 bp CACCAAGGAGATGTGGGCGGCCAGCGGTGCCGTGATGGAGCGCTTCATGAGCACAGCACATCCGGGGCGTaGGGGGCAAACACCTCGGGC +
Preference number: 5 (lower is better)
Translates to: HQGDVGGQRCRDGALHEHSTSGA*GANTSG
Trigger: GCCCGAGGTGTTTGCCCCCAACGCCCCGGATGTGCT...GTGCTCATGAAGCGCTCCATCACGGCACCGCTGGCCGCCCACATCTCCTTGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS GCA 90 bp AGAACGAAACGCGCGCCCGCGCAGTACAGCGGACGAACTCGGCTTTaGACCCGTTCTTCGGGACCCACGAGAGGAGACGGCCAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: RTKRAPAQYSGRTRL*TRSSGPTRGDGQER
Trigger: CCTCTCCTGGCCGTCTCCTCTCGTGGGTCCCGAAGAACGGGTGCAAAGCCGAGTTCGTCCGCTGTACTGCGCGGGCGCGCGTTTCGTTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000498611.5
CDS CCA 90 bp GCTTTGCCCTCTTCCGGTTCACACTGCGCTGGCCCAGGTGAGTCTTaGCAGCCGGCAGGAGGGCCTCACACAGGTCGTCGAACAGCTGCG +
Preference number: 5 (lower is better)
Translates to: ALPSSGSHCAGPGES*QPAGGPHTGRRTAA
Trigger: CGCAGCTGTTCGACGACCTGTGTGAGGCCCTCCTGCCGGCTGCCAAGACTCACCTGGGCCAGCGCAGTGTGAACCGGAAGAGGGCAAAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000498611.5
CDS CCA 90 bp AGGGCCCGGAGACGTGACCTGGGGGTGCACGCTCAAGAGGACGTCTaGCGGCTCCTGGGGCTGGTGAGCCTCAGACACTGCTTTCAGCAT +
Preference number: 5 (lower is better)
Translates to: RARRRDLGVHAQEDV*RLLGLVSLRHCFQH
Trigger: ATGCTGAAAGCAGTGTCTGAGGCTCACCAGCCCCAGGAGCCGCCAGACGTCCTCTTGAGCGTGCACCCCCAGGTCACGTCTCCGGGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000489511.5
ENST00000491449.5
ENST00000498611.5
CDS CCA 90 bp GGTGGCCACAGCTGGCCTCAGGACAGTACTAAAGTCGTACTCCTGTaGCCTGGAGGGCTGAGTGCTGGCTGCTGCGGGTGCCTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: GGHSWPQDSTKVVLL*PGGLSAGCCGCLPR
Trigger: CCTGGGGAGGCACCCGCAGCAGCCAGCACTCAGCCCTCCAGGCCACAGGAGTACGACTTTAGTACTGTCCTGAGGCCAGCTGTGGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000491449.5
ENST00000498611.5
CDS CCA 90 bp CCTCACCTGAAGACGGCCTTGTGCAGGTACTCTGCGTGCGCACGCTaGATCTCCTCCAGGTCGCCCACGGTGGCCAACCTGGCCCTGAAC +
Preference number: 5 (lower is better)
Translates to: PHLKTALCRYSACAR*ISSRSPTVANLALN
Trigger: GTTCAGGGCCAGGTTGGCCACCGTGGGCGACCTGGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCCGTCTTCAGGTGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498611.5
CDS-3UTR CAA 90 bp GAGATGTGGGCGGCCAGCGGTGCCGTGATGGAGCGCTTCATGAGCACGGGCAGCCTGCACTGCAGGGCCTaGCTCAGCACAGAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: EMWAASGAVMERFMSTGSLHCRA*LSTEFS
Trigger: GCTGAACTCTGTGCTGAGCAAGGCCCTGCAGTGCAG...GCTGCCCGTGCTCATGAAGCGCTCCATCACGGCACCGCTGGCCGCCCACATCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CAA 90 bp GACGGCCTTGTGCAGGTACTCTGCGTGCGCACGCTGGATCTCCTCCAGGTCGCCAGCAGGGCTGTGCGCTaGAGGTGGAAGCAGACGTCC +
Preference number: 5 (lower is better)
Translates to: DGLVQVLCVRTLDLLQVASRAVR*RWKQTS
Trigger: GGACGTCTGCTTCCACCTCAAGCGCACAGCCCTGCT...GGCGACCTGGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS TCA 90 bp GCGTGTAGCAGGTCCCATACTCGGCCACTTCCGAGAGCAGGCTGCTaGTGCTCTCGGGAGACGCTCCTGACACGTGGACGCCCCGCTTCA +
Preference number: 5 (lower is better)
Translates to: ACSRSHTRPLPRAGC*CSRETLLTRGRPAS
Trigger: TGAAGCGGGGCGTCCACGTGTCAGGAGCGTCTCCCGAGAGCATCAGCAGCCTGCTCTCGGAAGTGGCCGAGTATGGGACCTGCTACACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000434349.1
ENST00000439308.6
ENST00000498611.5
CDS GCA 90 bp GCCAACTCGCTCCCAGCACCTCCGCTTGCTGGCCTCATAGGTAAGTaGGGCTTCCCACAGGTCCACGTCTGGGGTCACGCTGGGCTCAGA +
Preference number: 5 (lower is better)
Translates to: ANSLPAPPLAGLIGK*GFPQVHVWGHAGLR
Trigger: TCTGAGCCCAGCGTGACCCCAGACGTGGACCTGTGGGAAGCCGCACTTACCTATGAGGCCAGCAAGCGGAGGTGCTGGGAGCGAGTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000498611.5
CDS GCA 90 bp TGTTGCTCTGCAGACCCAGAATCACAGCCTTGGCCTCCCTCTGGGTaGTCAGGGCCCGGAGACGTGACCTGGGGGTGCACGCTCAAGAGG +
Preference number: 5 (lower is better)
Translates to: CCSADPESQPWPPSG*SGPGDVTWGCTLKR
Trigger: CCTCTTGAGCGTGCACCCCCAGGTCACGTCTCCGGGCCCTGAGCACCCAGAGGGAGGCCAAGGCTGTGATTCTGGGTCTGCAGAGCAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000489511.5
ENST00000491449.5
ENST00000498611.5
CDS CCA 90 bp CGAGTGTTGCTCTGCAGACCCAGAATCACAGCCTTGGCCTCCCTCTaGGTGCTCAGGGCCCGGAGACGTGACCTGGGGGTGCACGCTCAA +
Preference number: 5 (lower is better)
Translates to: RVLLCRPRITALASL*VLRARRRDLGVHAQ
Trigger: TTGAGCGTGCACCCCCAGGTCACGTCTCCGGGCCCTGAGCACCCAGAGGGAGGCCAAGGCTGTGATTCTGGGTCTGCAGAGCAACACTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000489511.5
ENST00000491449.5
ENST00000498611.5
CDS CCA 90 bp TTTGGAGAGAGGTCCTCAGTGTCCCCGCTCCTCCCAGGGCCTGTGTaGACACAAGTGGACACGAGGGCATCAGGGCCGAGTGCCTGTGGC +
Preference number: 5 (lower is better)
Translates to: FGERSSVSPLLPGPV*TQVDTRASGPSACG
Trigger: GCCACAGGCACTCGGCCCTGATGCCCTCGTGTCCACTTGTGTCCACACAGGCCCTGGGAGGAGCGGGGACACTGAGGACCTCTCTCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491449.5
CDS-3UTR CAA 90 bp ACAGAGTTCAGCACCAGCGGGTTGAGCAGCTCTCCGGGCGTTTGCCCAGCTCCACTGTCTCCCGGGGTGTaGGGCCACCATGGTTGGGTG +
Preference number: 5 (lower is better)
Translates to: TEFSTSGLSSSPGVCPAPLSPGV*GHHGWV
Trigger: CACCCAACCATGGTGGCCCAACACCCCGGGAGACAG...TGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAACTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CAA 90 bp CCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCTCGGGCAGGTACTACCTCGGGCAGGTACTaGAGAGCGAGGGAGAGGTTG +
Preference number: 5 (lower is better)
Translates to: PGSSAHPGRWGQTPRAGTTSGRY*RARERL
Trigger: CAACCTCTCCCTCGCTCTCAAGTACCTGCCCGAGGT...AGTACCTGCCCGAGGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CAA 90 bp TCCTCCAGGTCGCCCACGGTGGCCAACCTGGCCCTGAACTCGCACCAGGTGACGTGGAAGCAGACGTCCTaGAGCGCCCACATCATGAGC +
Preference number: 5 (lower is better)
Translates to: SSRSPTVANLALNSHQVTWKQTS*SAHIMS
Trigger: GCTCATGATGTGGGCGCTCAAGGACGTCTGCTTCCA...CGTCACCTGGTGCGAGTTCAGGGCCAGGTTGGCCACCGTGGGCGACCTGGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS TCA 90 bp GACCCGGGTGTCTCTCTCGAACCTGTCACCACAAGGGTCACCAAATaGGAAGAGCCCGACGGTGGGCAGGCCAGTGCCTGGAGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: DPGVSLEPVTTRVTK*EEPDGGQASAWSSL
Trigger: GAGGCTGCTCCAGGCACTGGCCTGCCCACCGTCGGGCTCTTCTCATTTGGTGACCCTTGTGGTGACAGGTTCGAGAGAGACACCCGGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000498611.5
CDS TCA 90 bp GGGACTTCAGCCTTCTCTCCCTGTCTCGGAGTTCACGGGCGTAGCTaGAGTCATCATCCAGCTCCTCCTGCCTGGCCGCCTGGCGTCGCT +
Preference number: 5 (lower is better)
Translates to: GTSAFSPCLGVHGRS*SHHPAPPAWPPGVA
Trigger: AGCGACGCCAGGCGGCCAGGCAGGAGGAGCTGGATGATGACTTCAGCTACGCCCGTGAACTCCGAGACAGGGAGAGAAGGCTGAAGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000473946.1
ENST00000489511.5
ENST00000491449.5
ENST00000498611.5
CDS GCA 90 bp TTTAAAGGAGGTCTTGCGGTTGCTCTACTCAGAGTAAACACGCCCTaGCCTCCCCAGTCCAAGCACGCTGCCCGGCGCCCGGCAGCCCAC +
Preference number: 5 (lower is better)
Translates to: FKGGLAVALLRVNTP*PPQSKHAARRPAAH
Trigger: GTGGGCTGCCGGGCGCCGGGCAGCGTGCTTGGACTGGGGAGGGCAGGGCGTGTTTACTCTGAGTAGAGCAACCGCAAGACCTCCTTTAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000498611.5
CDS GCA 90 bp GTAGGACGCCCCCAGCAAGCAGCTGGAGCTCCCCTTGGTGGAGCCTaGAGAACTTGTCGAAAGCGTCCCTTCCCGCCTCCGTCAGGTAAG +
Preference number: 5 (lower is better)
Translates to: VGRPQQAAGAPLGGA*RTCRKRPFPPPSGK
Trigger: CTTACCTGACGGAGGCGGGAAGGGACGCTTTCGACAAGTTCTGCAGGCTCCACCAAGGGGAGCTCCAGCTGCTTGCTGGGGGCGTCCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000434349.1
ENST00000439308.6
ENST00000498611.5
CDS GCA 90 bp TTAATGGTCTGCAGCGCCACCTCCAGGAGAGGGACCATGCCAGTCTaGACGGACGGCTCAGCCCCTGGGCCCACAGGTAGGAAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: LMVCSATSRRGTMPV*TDGSAPGPTGRKSP
Trigger: TGGAGACTTCCTACCTGTGGGCCCAGGGGCTGAGCCGTCCGTGCAGACTGGCATGGTCCCTCTCCTGGAGGTGGCGCTGCAGACCATTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000491449.5
ENST00000498611.5
CDS GCA 90 bp ATGGAGCGCTTCATGAGCACGGGCAGCGTCAGCAACTCGCTCAGCTaGACAGCAGTCTCATCAGCGGCAGACTGGACCTGGGGGTCCACG +
Preference number: 5 (lower is better)
Translates to: MERFMSTGSVSNSLS*TAVSSAADWTWGST
Trigger: CGTGGACCCCCAGGTCCAGTCTGCCGCTGATGAGACTGCTGTGCAGCTGAGCGAGTTGCTGACGCTGCCCGTGCTCATGAAGCGCTCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000248846.10
ENST00000425018.1
ENST00000439308.6
ENST00000491449.5
ENST00000498611.5
CDS-3UTR CAA 90 bp CCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCTCGGGCAGGTACTTGGAGCCTGCAGAACTaGTCGAAAGCGTCCCTTCCC +
Preference number: 5 (lower is better)
Translates to: PGSSAHPGRWGQTPRAGTWSLQN*SKASLP
Trigger: GGGAAGGGACGCTTTCGACAAGTTCTGCAGGCTCCA...AGTACCTGCCCGAGGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CAA 90 bp TCCTCCAGGTCGCCCACGGTGGCCAACCTGGCCCTGAACTCGCACCAGGTGACGTGGAACACGAGGCCCTaGCTGTACAAAGAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: SSRSPTVANLALNSHQVTWNTRP*LYKESR
Trigger: CCTGGACTCTTTGTACAGCAAGGGCCTCGTGTTCCA...CGTCACCTGGTGCGAGTTCAGGGCCAGGTTGGCCACCGTGGGCGACCTGGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CAA 90 bp CACCAAGGAGATGTGGGCGGCCAGCGGTGCCGTGATGGAGCGCTTCATGAGCACAGAGGCCAGTCCACCTaGTACCTGAGCTCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: HQGDVGGQRCRDGALHEHRGQST*YLSSRQ
Trigger: CTGCCTGGAGCTCAGGTACAAGGTGGACTGGCCTCT...GTGCTCATGAAGCGCTCCATCACGGCACCGCTGGCCGCCCACATCTCCTTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS GCA 90 bp TCCACAGTGCCTTCTGCTCCCGACGAGCTGCCTCTGCAGAGAGCTTaGTGTAGTGGTCGACCAGTGCCTCGCCTTCCTCTCCAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: STVPSAPDELPLQRA*CSGRPVPRLPLQLL
Trigger: GAGGAGCTGGAGAGGAAGGCGAGGCACTGGTCGACCACTACAGCAAGCTCTCTGCAGAGGCAGCTCGTCGGGAGCAGAAGGCACTGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489511.5
CDS GCA 90 bp TCGGTGCCTCTGGATTCTCCACAGTGCCTTCTGCTCCCGACGAGCTaGCTCTGCAGAGAGCTTGCTGTAGTGGTCGACCAGTGCCTCGCC +
Preference number: 5 (lower is better)
Translates to: SVPLDSPQCLLLPTS*LCRELAVVVDQCLA
Trigger: GGCGAGGCACTGGTCGACCACTACAGCAAGCTCTCTGCAGAGGCAGCTCGTCGGGAGCAGAAGGCACTGTGGAGAATCCAGAGGCACCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489511.5
CDS CCA 90 bp GCCAGCCCAGGGCTCCCTGCCAACAGCAACTGCTGCACTCACACATaGACTCGTAACTGTCCGGGTACCGCTCCAAGTGGTACTGCCCTG +
Preference number: 5 (lower is better)
Translates to: ASPGLPANSNCCTHT*TRNCPGTAPSGTAL
Trigger: CAGGGCAGTACCACTTGGAGCGGTACCCGGACAGTTACGAGTCCATGTGTGAGTGCAGCAGTTGCTGTTGGCAGGGAGCCCTGGGCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498611.5
CDS GCA 90 bp CCTCTGGATTCTCCACAGTGCCTTCTGCTCCCGACGAGCTGCCTCTaGAGAGAGCTTGCTGTAGTGGTCGACCAGTGCCTGCCTCGCCTT +
Preference number: 5 (lower is better)
Translates to: PLDSPQCLLLPTSCL*RELAVVVDQCLPRL
Trigger: AAGGCGAGGCAGGCACTGGTCGACCACTACAGCAAGCTCTCTGCAGAGGCAGCTCGTCGGGAGCAGAAGGCACTGTGGAGAATCCAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000491449.5
ENST00000498611.5
CDS GCA 90 bp TCGGTGCCTCTGGATTCTCCACAGTGCCTTCTGCTCCCGACGAGCTaGCTCTGCAGAGAGCTTGCTGTAGTGGTCGACCAGTGCCTGCCT +
Preference number: 5 (lower is better)
Translates to: SVPLDSPQCLLLPTS*LCRELAVVVDQCLP
Trigger: AGGCAGGCACTGGTCGACCACTACAGCAAGCTCTCTGCAGAGGCAGCTCGTCGGGAGCAGAAGGCACTGTGGAGAATCCAGAGGCACCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000491449.5
ENST00000498611.5
CDS GCA 90 bp ACAGGACAGGTTGATAACAGCACAGGGAGACAGACGCAGATGCTGTaGTGGACAAATGCCCTGTCTCAGCCGAGCGCGGTGGCTCGCGCC +
Preference number: 5 (lower is better)
Translates to: TGQVDNSTGRQTQML*WTNALSQPSAVARA
Trigger: GGCGCGAGCCACCGCGCTCGGCTGAGACAGGGCATTTGTCCAGCACAGCATCTGCGTCTGTCTCCCTGTGCTGTTATCAACCTGTCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473946.1
CDS GCA 90 bp CCTCTGGATTCTCCACAGTGCCTTCTGCTCCCGACGAGCTGCCTCTaGAGAGAGCTTGCTGTAGTGGTCGACCAGTGCCTCGCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: PLDSPQCLLLPTSCL*RELAVVVDQCLAFL
Trigger: GAGGAAGGCGAGGCACTGGTCGACCACTACAGCAAGCTCTCTGCAGAGGCAGCTCGTCGGGAGCAGAAGGCACTGTGGAGAATCCAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489511.5
CDS-3UTR CAA 90 bp CTCCTCCAGGTCGCCCACGGTGGCCAACCTGGCCCTGAACTCGCACCAGGTGACTTCTCGCTGGTAGTTTaGACATGTCAGGCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: LLQVAHGGQPGPELAPGDFSLVV*TCQAAA
Trigger: AGCTGCAGCCTGACATGTCAAAACTACCAGCGAGAA...GTCACCTGGTGCGAGTTCAGGGCCAGGTTGGCCACCGTGGGCGACCTGGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CAA 90 bp CACCAAGGAGATGTGGGCGGCCAGCGGTGCCGTGATGGAGCGCTTCATGAGCACAATTCCTTCTCCTCCTaGCTGACAGAGCTGTGGCGG +
Preference number: 5 (lower is better)
Translates to: HQGDVGGQRCRDGALHEHNSFSS*LTELWR
Trigger: CCGCCACAGCTCTGTCAGCAAGGAGGAGAAGGAATT...GTGCTCATGAAGCGCTCCATCACGGCACCGCTGGCCGCCCACATCTCCTTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CAA 90 bp AGCAGGAAGGAGAAGACGCCGCTGTACTTGCTCACGCAGCCCTCGGTGATGACAAAGACGCCGCTGTACTaGCTCACGCAGCCCTCGGTG +
Preference number: 5 (lower is better)
Translates to: SRKEKTPLYLLTQPSVMTKTPLY*LTQPSV
Trigger: CACCGAGGGCTGCGTGAGCAAGTACAGCGGCGTCTT...TGTCATCACCGAGGGCTGCGTGAGCAAGTACAGCGGCGTCTTCTCCTTCCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS GCA 90 bp ACGAAGCCGTGCACTCTCCAGTCGGTGCCTCTGGATTCTCCACAGTaGCTTCTGCTCCCGACGAGCTGCCTCTGCAGAGAGCTTGCTGTA +
Preference number: 5 (lower is better)
Translates to: TKPCTLQSVPLDSPQ*LLLPTSCLCRELAV
Trigger: TACAGCAAGCTCTCTGCAGAGGCAGCTCGTCGGGAGCAGAAGGCACTGTGGAGAATCCAGAGGCACCGACTGGAGAGTGCACGGCTTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000489511.5
ENST00000491449.5
ENST00000498611.5
CDS CCA 90 bp GCGGCTTCCCACAGGTCCACGTCTGGGGTCACGCTGGGCTCAGACTaGGAATCAGGAGTCAAGTTGGACGCTGACTGGAATCCTTCGTCT +
Preference number: 5 (lower is better)
Translates to: AASHRSTSGVTLGSD*ESGVKLDADWNPSS
Trigger: AGACGAAGGATTCCAGTCAGCGTCCAACTTGACTCCTGATTCCCAGTCTGAGCCCAGCGTGACCCCAGACGTGGACCTGTGGGAAGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000434349.1
ENST00000439308.6
ENST00000498611.5
CDS-3UTR CAA 90 bp CTGAGCTCCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCTCGGGCTGCCGGCCAAGTTTCTaGAAGAGAAAACCAATGGTG +
Preference number: 5 (lower is better)
Translates to: LSSRQLSTSGALGANTSGCRPSF*KRKPMV
Trigger: CACCATTGGTTTTCTCTTCAAGAAACTTGGCCGGCA...GCCCGAGGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGGAGCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CAA 90 bp ACCTTTATTGTGCACGTCCCCCGCAGAGCAGCCTCAGGCGTCCTGGTAGTAGTTTTCAGCACCAGCGGGTaGAGCAGCTCTCCGGGCGTT +
Preference number: 5 (lower is better)
Translates to: TFIVHVPRRAASGVLVVVFSTSG*SSSPGV
Trigger: AACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAA...AACTACTACCAGGACGCCTGAGGCTGCTCTGCGGGGGACGTGCACAATAAAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CAA 90 bp ACCTTTATTGTGCACGTCCCCCGCAGAGCAGCCTCAGGCGTCCTGGTAGTAGTTCCCCTGAAGACGGCCTaGTGCAGGTACTCTGCGTGC +
Preference number: 5 (lower is better)
Translates to: TFIVHVPRRAASGVLVVVPLKTA*CRYSAC
Trigger: GCACGCAGAGTACCTGCACAAGGCCGTCTTCAGGGG...AACTACTACCAGGACGCCTGAGGCTGCTCTGCGGGGGACGTGCACAATAAAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CAA 90 bp GGGTTGAGCAGCTCTCCGGGCGTTTGCCCAGCTCCAAGCTTCTCAAAGAGCAGGCCGAGAACACCTTTATaGTGCACGTCCCCCGCAGAG +
Preference number: 5 (lower is better)
Translates to: GLSSSPGVCPAPSFSKSRPRTPL*CTSPAE
Trigger: CTCTGCGGGGGACGTGCACAATAAAGGTGTTCTCGG...CCTGCTCTTTGAGAAGCTTGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS GCA 90 bp ACAGCACAGGACAGGTTGATAACAGCACAGGGAGACAGACGCAGATaGTGTGCTGGACAAATGCCCTGTCTCAGCCGAGCGCGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: TAQDRLITAQGDRRR*CAGQMPCLSRARWL
Trigger: GAGCCACCGCGCTCGGCTGAGACAGGGCATTTGTCCAGCACAGCATCTGCGTCTGTCTCCCTGTGCTGTTATCAACCTGTCCTGTGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473946.1
CDS CCA 90 bp CTTGCTGGCCTCATAGGTAAGTGCGGCTTCCCACAGGTCCACGTCTaGGGTCACGCTGGGCTCAGACTGGGAATCAGGAGTCAAGTTGGA +
Preference number: 5 (lower is better)
Translates to: LAGLIGKCGFPQVHV*GHAGLRLGIRSQVG
Trigger: TCCAACTTGACTCCTGATTCCCAGTCTGAGCCCAGCGTGACCCCAGACGTGGACCTGTGGGAAGCCGCACTTACCTATGAGGCCAGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000434349.1
ENST00000439308.6
ENST00000498611.5
CDS-3UTR CAA 90 bp TTGCTCACGCAGCCCTCGGTGATGACAATGTTGAGAGGCCAGTCCACCTTGTACCGGACGAACTCGGCTTaGCACCCGTTCTTCGGGACC +
Preference number: 5 (lower is better)
Translates to: LLTQPSVMTMLRGQSTLYRTNSA*HPFFGT
Trigger: GGTCCCGAAGAACGGGTGCAAAGCCGAGTTCGTCCG...GTACAAGGTGGACTGGCCTCTCAACATTGTCATCACCGAGGGCTGCGTGAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CAA 90 bp CTGAGCTCCAGGCAGCTCAGCACATCCGGGGCGTTGGGGGCAAACACCTCGGGCTTTTTAAAGGAGGTCTaGCGGTTGCTCTACTCAGAG +
Preference number: 5 (lower is better)
Translates to: LSSRQLSTSGALGANTSGFLKEV*RLLYSE
Trigger: CTCTGAGTAGAGCAACCGCAAGACCTCCTTTAAAAA...GCCCGAGGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGGAGCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CAA 90 bp AGCAGGAAGGAGAAGACGCCGCTGTACTTGCTCACGCAGCCCTCGGTGATGACATTTTCTCGGCAGAACTaGAGGGGGACCACTCCCTGC +
Preference number: 5 (lower is better)
Translates to: SRKEKTPLYLLTQPSVMTFSRQN*RGTTPC
Trigger: GCAGGGAGTGGTCCCCCTCAAGTTCTGCCGAGAAAA...TGTCATCACCGAGGGCTGCGTGAGCAAGTACAGCGGCGTCTTCTCCTTCCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CAA 90 bp AGCTGGCTGCGGAACTTGAGCACGAGGCTGAAGATGCTGTGGATGACGTTCATGTGGGGCCTGGGTGTGTaGGGCTCAGCTTCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: SWLRNLSTRLKMLWMTFMWGLGV*GSASGE
Trigger: CTCACCAGAAGCTGAGCCCAACACACCCAGGCCCCA...CATGAACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTTCCGCAGCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS TCA 90 bp GGTCACGCTGGGCTCAGACTGGGAATCAGGAGTCAAGTTGGACGCTaGCTGGAATCCTTCGTCTTCCCACTGATCCACACTCGGTGGGAC +
Preference number: 5 (lower is better)
Translates to: GHAGLRLGIRSQVGR*LESFVFPLIHTRWD
Trigger: GTCCCACCGAGTGTGGATCAGTGGGAAGACGAAGGATTCCAGTCAGCGTCCAACTTGACTCCTGATTCCCAGTCTGAGCCCAGCGTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000498611.5
CDS CCA 90 bp CGTCTGGGGTCACGCTGGGCTCAGACTGGGAATCAGGAGTCAAGTTaGACGCTGACTGGAATCCTTCGTCTTCCCACTGATCCACACTCG +
Preference number: 5 (lower is better)
Translates to: RLGSRWAQTGNQESS*TLTGILRLPTDPHS
Trigger: CGAGTGTGGATCAGTGGGAAGACGAAGGATTCCAGTCAGCGTCCAACTTGACTCCTGATTCCCAGTCTGAGCCCAGCGTGACCCCAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000434349.1
ENST00000439308.6
ENST00000498611.5
CDS-3UTR CAA 90 bp GATGAGCTGGCTGCGGAACTTGAGCACGAGGCTGAAGATGCTGTGGATGACGTTCAGCTGGAGCTCCCCTaGGTGGAGCCTGCAGAACTT +
Preference number: 5 (lower is better)
Translates to: DELAAELEHEAEDAVDDVQLELP*VEPAEL
Trigger: AAGTTCTGCAGGCTCCACCAAGGGGAGCTCCAGCTG...AACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTTCCGCAGCCAGCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CAA 90 bp TTGCTCACGCAGCCCTCGGTGATGACAATGTTGAGAGGCCAGTCCACCTTGTACCCAGGCAGGCGAGTGTaGCTCTGCAGACCCAGAATC +
Preference number: 5 (lower is better)
Translates to: LLTQPSVMTMLRGQSTLYPGRRV*LCRPRI
Trigger: GATTCTGGGTCTGCAGAGCAACACTCGCCTGCCTGG...GTACAAGGTGGACTGGCCTCTCAACATTGTCATCACCGAGGGCTGCGTGAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CAA 90 bp AGCTGGCTGCGGAACTTGAGCACGAGGCTGAAGATGCTGTGGATGACGTTCATGTGCATGAGTGCAAAGTaGGGGTGCTCTGCACCCCGC +
Preference number: 5 (lower is better)
Translates to: SWLRNLSTRLKMLWMTFMCMSAK*GCSAPR
Trigger: GCGGGGTGCAGAGCACCCCAACTTTGCACTCATGCA...CATGAACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTTCCGCAGCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CAA 90 bp GTTTGCCCAGCTCCAAGCTTCTCAAAGAGCAGGTCGCTGAGGGACTGGGCGAACCCGCGGTTCACCAGCTaGGTCACCACTTTGAAGAGA +
Preference number: 5 (lower is better)
Translates to: VCPAPSFSKSRSLRDWANPRFTS*VTTLKR
Trigger: TCTCTTCAAAGTGGTGACCAAGCTGGTGAACCGCGG...GTTCGCCCAGTCCCTCAGCGACCTGCTCTTTGAGAAGCTTGGAGCTGGGCAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS TCA 90 bp GCCTGGCGTCGCTCCTGGTCCTTCACAAATTGTTCTTTCAGCCTCTaGAACTGCTCACGCTTCCGGGCATCCAAGGCCATCCGTTCTGAC +
Preference number: 5 (lower is better)
Translates to: AWRRSWSFTNCSFSL*NCSRFRASKAIRSD
Trigger: GTCAGAACGGATGGCCTTGGATGCCCGGAAGCGTGAGCAGTTTCAGAGGCTGAAAGAACAATTTGTGAAGGACCAGGAGCGACGCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000473946.1
ENST00000489511.5
ENST00000491449.5
ENST00000498611.5
CDS CCA 90 bp TCTTCTAAGAGAAAACGAAGCCGTGCACTCTCCAGTCGGTGCCTCTaGATTCTCCACAGTGCCTTCTGCTCCCGACGAGCTGCCTCTGCA +
Preference number: 5 (lower is better)
Translates to: SSKRKRSRALSSRCL*ILHSAFCSRRAASA
Trigger: TGCAGAGGCAGCTCGTCGGGAGCAGAAGGCACTGTGGAGAATCCAGAGGCACCGACTGGAGAGTGCACGGCTTCGTTTTCTCTTAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000489511.5
ENST00000491449.5
ENST00000498611.5
CDS-3UTR CAA 90 bp GGGTTGAGCAGCTCTCCGGGCGTTTGCCCAGCTCCAAGCTTCTCAAAGAGCAGGGTGTCTTCCTGTGAGTaGAGAGGCCAATTTGGAGAG +
Preference number: 5 (lower is better)
Translates to: GLSSSPGVCPAPSFSKSRVSSCE*RGQFGE
Trigger: CTCTCCAAATTGGCCTCTCAACTCACAGGAAGACAC...CCTGCTCTTTGAGAAGCTTGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CAA 90 bp GCCGCTGTACTTGCTCACGCAGCCCTCGGTGATGACAATGTTGAGAGGCCAGTCTCGGTGATGACAATGTaGAGAGGCCAGTCCACCTTG +
Preference number: 5 (lower is better)
Translates to: AAVLAHAALGDDNVERPVSVMTM*RGQSTL
Trigger: CAAGGTGGACTGGCCTCTCAACATTGTCATCACCGA...GACTGGCCTCTCAACATTGTCATCACCGAGGGCTGCGTGAGCAAGTACAGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS-3UTR CAA 90 bp GATGAGCTGGCTGCGGAACTTGAGCACGAGGCTGAAGATGCTGTGGATGACGTTAGCTGGCTGCGGAACTaGAGCACGAGGCTGAAGATG +
Preference number: 5 (lower is better)
Translates to: DELAAELEHEAEDAVDDVSWLRN*STRLKM
Trigger: CATCTTCAGCCTCGTGCTCAAGTTCCGCAGCCAGCT...AACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTTCCGCAGCCAGCTCATC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS GCA 90 bp ATTTGTGAAAAGAGCATTGTAGGCCACCTTCTTGAGGCTCCGCTTTaGCCTCTTCCGGTTCACACTGCGCTGGCCCAGGTGAGTCTTGGC +
Preference number: 5 (lower is better)
Translates to: ICEKSIVGHLLEAPL*PLPVHTALAQVSLG
Trigger: GCCAAGACTCACCTGGGCCAGCGCAGTGTGAACCGGAAGAGGGCAAAGCGGAGCCTCAAGAAGGTGGCCTACAATGCTCTTTTCACAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000498611.5
CDS GCA 90 bp TTCTCATCTTCTAAGAGAAAACGAAGCCGTGCACTCTCCAGTCGGTaGCTCTGGATTCTCCACAGTGCCTTCTGCTCCCGACGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: FSSSKRKRSRALSSR*LWILHSAFCSRRAA
Trigger: GGCAGCTCGTCGGGAGCAGAAGGCACTGTGGAGAATCCAGAGGCACCGACTGGAGAGTGCACGGCTTCGTTTTCTCTTAGAAGATGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000489511.5
ENST00000491449.5
ENST00000498611.5
CDS-3UTR CAA 90 bp AGCAGGAAGGAGAAGACGCCGCTGTACTTGCTCACGCAGCCCTCGGTGATGACAGAATCAGGAGTCAAGTaGGACGCTGACTGGAATCCT +
Preference number: 5 (lower is better)
Translates to: SRKEKTPLYLLTQPSVMTESGVK*DADWNP
Trigger: AGGATTCCAGTCAGCGTCCAACTTGACTCCTGATTC...TGTCATCACCGAGGGCTGCGTGAGCAAGTACAGCGGCGTCTTCTCCTTCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS TCA 90 bp CGGCCTTGGGGCCCAGGCCACCCACTCTCAAGTCAAAGGACAACATaGGGATCTTGTTTCTCGCTGGTAGTTTTGACATGTCAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: RPWGPGHPLSSQRTT*GSCFSLVVLTCQAA
Trigger: TGCAGCCTGACATGTCAAAACTACCAGCGAGAAACAAGATCCTCATGTTGTCCTTTGACTTGAGAGTGGGTGGCCTGGGCCCCAAGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000498611.5
CDS CCA 90 bp GATTTTGAGCTTCTCACCAGCAGGCAACTGGGCTCAAACCTGGACTaGCCAGCTCTAATTTGGCTGCCACAGGCCAGAGACGTAGTGTCT +
Preference number: 5 (lower is better)
Translates to: DFELLTSRQLGSNLD*PALIWLPQARDVVS
Trigger: AGACACTACGTCTCTGGCCTGTGGCAGCCAAATTAGAGCTGGCCAGTCCAGGTTTGAGCCCAGTTGCCTGCTGGTGAGAAGCTCAAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473946.1
CDS CCA 90 bp CATACAAACCACCACAAGACAACGCGCAGAACAGCTAAGGATGCCTaGATAAGGCAGAACGCCCACAGCCACTCTGGGTTCAGCATATTG +
Preference number: 5 (lower is better)
Translates to: HTNHHKTTRRTAKDA*IRQNAHSHSGFSIL
Trigger: CAATATGCTGAACCCAGAGTGGCTGTGGGCGTTCTGCCTTATCCAGGCATCCTTAGCTGTTCTGCGCGTTGTCTTGTGGTGGTTTGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473946.1
CDS-3UTR CAA 90 bp GCCGCTGTACTTGCTCACGCAGCCCTCGGTGATGACAATGTTGAGAGGCCAGTCGACAACATGAGGATCTaGTTTCTCGCTGGTAGTTTT +
Preference number: 5 (lower is better)
Translates to: AAVLAHAALGDDNVERPVDNMRI*FLAGSF
Trigger: AAAACTACCAGCGAGAAACAAGATCCTCATGTTGTC...GACTGGCCTCTCAACATTGTCATCACCGAGGGCTGCGTGAGCAAGTACAGCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439308.6
CDS CCA 90 bp CAGAGCTTCAGCAGGTTAATGGTCTTTCCGCAGACGTATATGTCGTaGGCAATGTGCTTCAGAAACACGGGAACACAGTCCTCCACCTCT +
Preference number: 5 (lower is better)
Translates to: QSFSRLMVFPQTYMS*AMCFRNTGTQSSTS
Trigger: AGAGGTGGAGGACTGTGTTCCCGTGTTTCTGAAGCACATTGCCCACGACATATACGTCTGCGGAAAGACCATTAACCTGCTGAAGCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000473946.1
ENST00000491449.5
ENST00000498611.5
CDS GCA 90 bp AGCAGGTTAATGGTCTTTCCGCAGACGTATATGTCGTGGGCAATGTaGTTCAGAAACACGGGAACACAGTCCTCCACCTCTTTGGAGATG +
Preference number: 5 (lower is better)
Translates to: SRLMVFPQTYMSWAM*FRNTGTQSSTSLEM
Trigger: CATCTCCAAAGAGGTGGAGGACTGTGTTCCCGTGTTTCTGAAGCACATTGCCCACGACATATACGTCTGCGGAAAGACCATTAACCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000473946.1
ENST00000491449.5
ENST00000498611.5
CDS TCA 90 bp CGGTCACTCAGTGCACTCAGGACCCTGGATGCTGCTTCCCGGGCATaGGCGATTAATTCTTGTTTTGCAATTTCCATACGTAATTCCTTC +
Preference number: 5 (lower is better)
Translates to: RSLSALRTLDAASRA*AINSCFAISIRNSF
Trigger: GAAGGAATTACGTATGGAAATTGCAAAACAAGAATTAATCGCTCATGCCCGGGAAGCAGCATCCAGGGTCCTGAGTGCACTGAGTGACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000473946.1
ENST00000491449.5
ENST00000498611.5
CDS GCA 72 bp CGGTGGGAAACGCGGCCCTGGGGCCTCCTCCACAGGTaGCCGGGAGCACAGCGCCAACGCCACAGAGCTCGG +
Preference number: 6 (lower is better)
Translates to: RWETRPWGLLHR*PGAQRQRHRAR
Trigger: CCGAGCTCTGTGGCGTTGGCGCTGTGCTCCCGGGCACCTGTGGAGGAGGCCCCAGGGCCGCGTTTCCCACCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000434349.1
ENST00000439308.6
ENST00000498611.5
CDS GCA 72 bp GTAGGCCTGCTCCCCACCCTGAGCCTCCGCCGCCGATaGCTCCGCCTCCTCACCACGGCCTGGGCTGCTCTG +
Preference number: 6 (lower is better)
Translates to: VGLLPTLSLRRR*LRLLTTAWAAL
Trigger: CAGAGCAGCCCAGGCCGTGGTGAGGAGGCGGAGGCATCGGCGGCGGAGGCTCAGGGTGGGGAGCAGGCCTAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248846.10
ENST00000425018.1
ENST00000439308.6
ENST00000491449.5
ENST00000498611.5
CDS CCA 72 bp GGGTGCCACTCCGAGGGTCGTGGGCAGCGGAGAGTCTaGGGGCTCAGCCGGGTGGGTCCCGGGTTCTGGCCT +
Preference number: 6 (lower is better)
Translates to: GCHSEGRGQRRV*GLSRVGPGFWP
Trigger: AGGCCAGAACCCGGGACCCACCCGGCTGAGCCCCCAGACTCTCCGCTGCCCACGACCCTCGGAGTGGCACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000498611.5
CDS GCA 72 bp GTTCTCCAGGCCTCACCCGTGGAAAGTGCCCACGGCTaGCGCTCTCGCCGCCTCCGTCGCGTCACAGCCGCG +
Preference number: 6 (lower is better)
Translates to: VLQASPVESAHG*RSRRLRRVTAA
Trigger: CGCGGCTGTGACGCGACGGAGGCGGCGAGAGCGGCAGCCGTGGGCACTTTCCACGGGTGAGGCCTGGAGAAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248846.10
CDS GCA 72 bp CTGGGGGCTCAGCCGGGTGGGTCCCGGGTTCTGGCCTaGACGTCCACCCGTTCTCCAGGCCTCACCCGTGGA +
Preference number: 6 (lower is better)
Translates to: LGAQPGGSRVLA*TSTRSPGLTRG
Trigger: TCCACGGGTGAGGCCTGGAGAACGGGTGGACGTGCAGGCCAGAACCCGGGACCCACCCGGCTGAGCCCCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000498611.5
CDS CCA 72 bp GGCCTGCACGTCCACCCGTTCTCCAGGCCTCACCCGTaGAAAGTGCCCACGGCTGCCGCTCTCGCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: GLHVHPFSRPHP*KVPTAAALAAS
Trigger: GGAGGCGGCGAGAGCGGCAGCCGTGGGCACTTTCCACGGGTGAGGCCTGGAGAACGGGTGGACGTGCAGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248846.10
CDS CCA 72 bp AGGACAGCAGCTTCACGCCGGTGGGAAACGCGGCCCTaGGGCCTCCTCCACAGGTGCCCGGGAGCACAGCGC +
Preference number: 6 (lower is better)
Translates to: RTAASRRWETRP*GLLHRCPGAQR
Trigger: GCGCTGTGCTCCCGGGCACCTGTGGAGGAGGCCCCAGGGCCGCGTTTCCCACCGGCGTGAAGCTGCTGTCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000434349.1
ENST00000439308.6
ENST00000498611.5
CDS GCA 72 bp ACGTCCACCCGTTCTCCAGGCCTCACCCGTGGAAAGTaGCCACGGCTGCCGCTCTCGCCGCCTCCGTCGCGT +
Preference number: 6 (lower is better)
Translates to: TSTRSPGLTRGK*PRLPLSPPPSR
Trigger: ACGCGACGGAGGCGGCGAGAGCGGCAGCCGTGGGCACTTTCCACGGGTGAGGCCTGGAGAACGGGTGGACGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248846.10
CDS GCA 72 bp CCAGGGCCTGCCCAAAGAGCCGCTCTGTGGGCTGGCTaGTCCCCTCCTCCAGAGCAGCACGCCTGGGTGGGT +
Preference number: 6 (lower is better)
Translates to: PGPAQRAALWAG*SPPPEQHAWVG
Trigger: ACCCACCCAGGCGTGCTGCTCTGGAGGAGGGGAGCAGCCAGCCCACAGAGCGGCTCTTTGGGCAGGCCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498611.5
CDS CCA 72 bp AGAGTCTGGGGGCTCAGCCGGGTGGGTCCCGGGTTCTaGCCTGCACGTCCACCCGTTCTCCAGGCCTCACCC +
Preference number: 6 (lower is better)
Translates to: RVWGLSRVGPGF*PARPPVLQASP
Trigger: GGGTGAGGCCTGGAGAACGGGTGGACGTGCAGGCCAGAACCCGGGACCCACCCGGCTGAGCCCCCAGACTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000498611.5
CDS GCA 72 bp CGCGCGCCCGCGCAGTACAGCGGACGAACTCGGCTTTaGACCCGTTCTTCGGGACCCACGAGAGGAGACGGC +
Preference number: 6 (lower is better)
Translates to: RAPAQYSGRTRL*TRSSGPTRGDG
Trigger: GCCGTCTCCTCTCGTGGGTCCCGAAGAACGGGTGCAAAGCCGAGTTCGTCCGCTGTACTGCGCGGGCGCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000498611.5
CDS GCA 72 bp TGCAGCGCCACCTCCAGGAGAGGGACCATGCCAGTCTaGACGGACGGCTCAGCCCCTGGGCCCACAGGTAGG +
Preference number: 6 (lower is better)
Translates to: CSATSRRGTMPV*TDGSAPGPTGR
Trigger: CCTACCTGTGGGCCCAGGGGCTGAGCCGTCCGTGCAGACTGGCATGGTCCCTCTCCTGGAGGTGGCGCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000491449.5
ENST00000498611.5
CDS GCA 72 bp CGGGCGCCGCCTGAAGACGGCCTTGTGCAGGTACTCTaGGTGCGCACGCTGGATCTCCTCCAGGTCGCCCAC +
Preference number: 6 (lower is better)
Translates to: RAPPEDGLVQVL*VRTLDLLQVAH
Trigger: GTGGGCGACCTGGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCCGTCTTCAGGCGGCGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425018.1
CDS GCA 72 bp GTGGACACAAGTGGACACGAGGGCATCAGGGCCGAGTaGCTGTGGCGGGTACAGAGCCGAGCCGGCCCTGGC +
Preference number: 6 (lower is better)
Translates to: VDTSGHEGIRAE*LWRVQSRAGPG
Trigger: GCCAGGGCCGGCTCGGCTCTGTACCCGCCACAGGCACTCGGCCCTGATGCCCTCGTGTCCACTTGTGTCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491449.5
CDS GCA 72 bp CTGACACCTGCCCAAAGAGCCGCTCTGTGGGCTGGCTaGTCCCCTCCTCCAGAGCAGCACGCCTGGGTGGGT +
Preference number: 6 (lower is better)
Translates to: LTPAQRAALWAG*SPPPEQHAWVG
Trigger: ACCCACCCAGGCGTGCTGCTCTGGAGGAGGGGAGCAGCCAGCCCACAGAGCGGCTCTTTGGGCAGGTGTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000491449.5
CDS CCA 72 bp AGGCTGCTGATGCTCTCGGGAGACGCTCCTGACACGTaGACGCCCCGCTTCACCACAAAGGCCTGGGCCGGC +
Preference number: 6 (lower is better)
Translates to: RLLMLSGDAPDT*TPRFTTKAWAG
Trigger: GCCGGCCCAGGCCTTTGTGGTGAAGCGGGGCGTCCACGTGTCAGGAGCGTCTCCCGAGAGCATCAGCAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000434349.1
ENST00000439308.6
ENST00000498611.5
CDS CCA 72 bp TCGCTCAGCTGCACAGCAGTCTCATCAGCGGCAGACTaGACCTGGGGGTCCACGGGGAAGGCGAAGGCCCGG +
Preference number: 6 (lower is better)
Translates to: SLSCTAVSSAAD*TWGSTGKAKAR
Trigger: CCGGGCCTTCGCCTTCCCCGTGGACCCCCAGGTCCAGTCTGCCGCTGATGAGACTGCTGTGCAGCTGAGCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000248846.10
ENST00000425018.1
ENST00000439308.6
ENST00000491449.5
ENST00000498611.5
CDS CCA 72 bp ACAAGTGGACACGAGGGCATCAGGGCCGAGTGCCTGTaGCGGGTACAGAGCCGAGCCGGCCCTGGCTCAAGC +
Preference number: 6 (lower is better)
Translates to: TSGHEGIRAECL*RVQSRAGPGSS
Trigger: GCTTGAGCCAGGGCCGGCTCGGCTCTGTACCCGCCACAGGCACTCGGCCCTGATGCCCTCGTGTCCACTTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491449.5
CDS CAA 72 bp ACGCGCGCCCGCGCAGTACAGCGGACGAACTCGGCTTaGCACCCGTTCTTCGGGACCCACGAGAGGAGACGG +
Preference number: 6 (lower is better)
Translates to: TRARAVQRTNSA*HPFFGTHERRR
Trigger: CCGTCTCCTCTCGTGGGTCCCGAAGAACGGGTGCAAAGCCGAGTTCGTCCGCTGTACTGCGCGGGCGCGCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000498611.5
CDS CAA 90 bp ACCACAGGGACGCAGCCGCTGCCCAGGCCTCACCTGAAGACGGCCTaGTGCAGGTACTCTGCGTGCGCACGCTGGATCTCCTCCAGGTCG +
Preference number: 6 (lower is better)
Translates to: TTGTQPLPRPHLKTA*CRYSACARWISSRS
Trigger: CGACCTGGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCCGTCTTCAGGTGAGGCCTGGGCAGCGGCTGCGTCCCTGTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498611.5
CDS GCA 72 bp GGTCTTGCGGTTGCTCTACTCAGAGTAAACACGCCCTaGCCTCCCCAGTCCAAGCACGCTGCCCGGCGCCCG +
Preference number: 6 (lower is better)
Translates to: GLAVALLRVNTP*PPQSKHAARRP
Trigger: CGGGCGCCGGGCAGCGTGCTTGGACTGGGGAGGGCAGGGCGTGTTTACTCTGAGTAGAGCAACCGCAAGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000498611.5
CDS GCA 72 bp TCTTTCACCAGCTCGCACTCCTTCACCAGCACGGGCTaGGGGGCCTGTAGGACGCCCCCAGCAAGCAGCTGG +
Preference number: 6 (lower is better)
Translates to: SFTSSHSFTSTG*GACRTPPASSW
Trigger: CCAGCTGCTTGCTGGGGGCGTCCTACAGGCCCCGCAGCCCGTGCTGGTGAAGGAGTGCGAGCTGGTGAAAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000434349.1
ENST00000439308.6
ENST00000498611.5
CDS GCA 72 bp TGTCCTCCCACAGCTGTAGCCCTGAGCTGCCCAAGCTaGACTCTGCAGCCTGCAGGGGCCCTGGTGCAGGTG +
Preference number: 6 (lower is better)
Translates to: CPPTAVALSCPS*TLQPAGALVQV
Trigger: CACCTGCACCAGGGCCCCTGCAGGCTGCAGAGTGCAGCTTGGGCAGCTCAGGGCTACAGCTGTGGGAGGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000491449.5
ENST00000498611.5
CDS CCA 72 bp AGACGTGACCTGGGGGTGCACGCTCAAGAGGACGTCTaGCGGCTCCTGGGGCTGGTGAGCCTCAGACACTGC +
Preference number: 6 (lower is better)
Translates to: RRDLGVHAQEDV*RLLGLVSLRHC
Trigger: GCAGTGTCTGAGGCTCACCAGCCCCAGGAGCCGCCAGACGTCCTCTTGAGCGTGCACCCCCAGGTCACGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000489511.5
ENST00000491449.5
ENST00000498611.5
CDS CAA 72 bp ACGCAGCCGCTGCCCAGGCCTCACCTGAAGACGGCCTaGTGCAGGTACTCTGCGTGCGCACGCTGGATCTCC +
Preference number: 6 (lower is better)
Translates to: TQPLPRPHLKTA*CRYSACARWIS
Trigger: GGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCCGTCTTCAGGTGAGGCCTGGGCAGCGGCTGCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498611.5
CDS CAA 90 bp ATCCCAGGCAGGCGAGTGTTGCTCTGCAGACCCAGAATCACAGCCTaGGCCTCCCTCTGGGTGCTCAGGGCCCGGAGACGTGACCTGGGG +
Preference number: 6 (lower is better)
Translates to: IPGRRVLLCRPRITA*ASLWVLRARRRDLG
Trigger: CCCCAGGTCACGTCTCCGGGCCCTGAGCACCCAGAGGGAGGCCAAGGCTGTGATTCTGGGTCTGCAGAGCAACACTCGCCTGCCTGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000489511.5
ENST00000491449.5
ENST00000498611.5
CDS TCA 72 bp TTTGCCCTCTTCCGGTTCACACTGCGCTGGCCCAGGTaGGTCTTGGCAGCCGGCAGGAGGGCCTCACACAGG +
Preference number: 6 (lower is better)
Translates to: FALFRFTLRWPR*VLAAGRRASHR
Trigger: CCTGTGTGAGGCCCTCCTGCCGGCTGCCAAGACTCACCTGGGCCAGCGCAGTGTGAACCGGAAGAGGGCAAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000498611.5
CDS GCA 72 bp CCCCAGCAAGCAGCTGGAGCTCCCCTTGGTGGAGCCTaGAGAACTTGTCGAAAGCGTCCCTTCCCGCCTCCG +
Preference number: 6 (lower is better)
Translates to: PQQAAGAPLGGA*RTCRKRPFPPP
Trigger: CGGAGGCGGGAAGGGACGCTTTCGACAAGTTCTGCAGGCTCCACCAAGGGGAGCTCCAGCTGCTTGCTGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000434349.1
ENST00000439308.6
ENST00000498611.5
CDS GCA 72 bp TCCCACAACTGTCCTCCCACAGCTGTAGCCCTGAGCTaGCCAAGCTGCACTCTGCAGCCTGCAGGGGCCCTG +
Preference number: 6 (lower is better)
Translates to: SHNCPPTAVALS*PSCTLQPAGAL
Trigger: CAGGGCCCCTGCAGGCTGCAGAGTGCAGCTTGGGCAGCTCAGGGCTACAGCTGTGGGAGGACAGTTGTGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000491449.5
ENST00000498611.5
CDS GCA 72 bp GACGTTCATGACGGGCGCCGCCTGAAGACGGCCTTGTaGAGGTACTCTGCGTGCGCACGCTGGATCTCCTCC +
Preference number: 6 (lower is better)
Translates to: DVHDGRRLKTAL*RYSACARWISS
Trigger: GGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCCGTCTTCAGGCGGCGCCCGTCATGAACGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425018.1
CDS GCA 72 bp CAGGCCTCACCTGAAGACGGCCTTGTGCAGGTACTCTaGGTGCGCACGCTGGATCTCCTCCAGGTCGCCCAC +
Preference number: 6 (lower is better)
Translates to: QASPEDGLVQVL*VRTLDLLQVAH
Trigger: GTGGGCGACCTGGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCCGTCTTCAGGTGAGGCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498611.5
CDS CCA 72 bp TCTTCCGGTTCACACTGCGCTGGCCCAGGTGAGTCTTaGCAGCCGGCAGGAGGGCCTCACACAGGTCGTCGA +
Preference number: 6 (lower is better)
Translates to: SSGSHCAGPGES*QPAGGPHTGRR
Trigger: TCGACGACCTGTGTGAGGCCCTCCTGCCGGCTGCCAAGACTCACCTGGGCCAGCGCAGTGTGAACCGGAAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000498611.5
CDS CCA 72 bp AGGTCCTCAGTGTCCCCGCTCCTCCCAGGGCCTGTGTaGACACAAGTGGACACGAGGGCATCAGGGCCGAGT +
Preference number: 6 (lower is better)
Translates to: RSSVSPLLPGPV*TQVDTRASGPS
Trigger: ACTCGGCCCTGATGCCCTCGTGTCCACTTGTGTCCACACAGGCCCTGGGAGGAGCGGGGACACTGAGGACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491449.5
CDS CAA 90 bp AAGAACGAAACGCGCGCCCGCGCAGTACAGCGGACGAACTCGGCTTaGCACCCGTTCTTCGGGACCCACGAGAGGAGACGGCCAGGAGAG +
Preference number: 6 (lower is better)
Translates to: KNETRARAVQRTNSA*HPFFGTHERRRPGE
Trigger: CTCTCCTGGCCGTCTCCTCTCGTGGGTCCCGAAGAACGGGTGCAAAGCCGAGTTCGTCCGCTGTACTGCGCGGGCGCGCGTTTCGTTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000498611.5
CDS TCA 72 bp AGGTCCCATACTCGGCCACTTCCGAGAGCAGGCTGCTaGTGCTCTCGGGAGACGCTCCTGACACGTGGACGC +
Preference number: 6 (lower is better)
Translates to: RSHTRPLPRAGC*CSRETLLTRGR
Trigger: GCGTCCACGTGTCAGGAGCGTCTCCCGAGAGCATCAGCAGCCTGCTCTCGGAAGTGGCCGAGTATGGGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000434349.1
ENST00000439308.6
ENST00000498611.5
CDS GCA 72 bp CCTTCTGCTCCCGACGAGCTGCCTCTGCAGAGAGCTTaGTGTAGTGGTCGACCAGTGCCTGCCTCGCCTTCC +
Preference number: 6 (lower is better)
Translates to: PSAPDELPLQRA*CSGRPVPASPS
Trigger: GGAAGGCGAGGCAGGCACTGGTCGACCACTACAGCAAGCTCTCTGCAGAGGCAGCTCGTCGGGAGCAGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000491449.5
ENST00000498611.5
CDS GCA 72 bp CCTGGCCTGTTCCAGCCATCCCAGGCAGGCGAGTGTTaGTCTGCAGACCCAGAATCACAGCCTTGGCCTCCC +
Preference number: 6 (lower is better)
Translates to: PGLFQPSQAGEC*SADPESQPWPP
Trigger: GGGAGGCCAAGGCTGTGATTCTGGGTCTGCAGAGCAACACTCGCCTGCCTGGGATGGCTGGAACAGGCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000489511.5
ENST00000491449.5
ENST00000498611.5
CDS CAA 72 bp AGGCGAGTGTTGCTCTGCAGACCCAGAATCACAGCCTaGGCCTCCCTCTGGGTGCTCAGGGCCCGGAGACGT +
Preference number: 6 (lower is better)
Translates to: RRVLLCRPRITA*ASLWVLRARRR
Trigger: ACGTCTCCGGGCCCTGAGCACCCAGAGGGAGGCCAAGGCTGTGATTCTGGGTCTGCAGAGCAACACTCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000489511.5
ENST00000491449.5
ENST00000498611.5
CDS TCA 72 bp ACAGTACTAAAGTCGTACTCCTGTGGCCTGGAGGGCTaGGTGCTGGCTGCTGCGGGTGCCTCCCCAGGAGCT +
Preference number: 6 (lower is better)
Translates to: TVLKSYSCGLEG*VLAAAGASPGA
Trigger: AGCTCCTGGGGAGGCACCCGCAGCAGCCAGCACTCAGCCCTCCAGGCCACAGGAGTACGACTTTAGTACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000491449.5
ENST00000498611.5
CDS TCA 72 bp TTCAGAAGCGTAGTCCCCTGTGGGAAGACCACCCCCTaGCACCTGCCCAAAGAGCCGCTCTGTGGGCTGGCT +
Preference number: 6 (lower is better)
Translates to: FRSVVPCGKTTP*HLPKEPLCGLA
Trigger: AGCCAGCCCACAGAGCGGCTCTTTGGGCAGGTGTCAGGGGGTGGTCTTCCCACAGGGGACTACGCTTCTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000491449.5
CDS GCA 72 bp CCTTCTGCTCCCGACGAGCTGCCTCTGCAGAGAGCTTaGTGTAGTGGTCGACCAGTGCCTCGCCTTCCTCTC +
Preference number: 6 (lower is better)
Translates to: PSAPDELPLQRA*CSGRPVPRLPL
Trigger: GAGAGGAAGGCGAGGCACTGGTCGACCACTACAGCAAGCTCTCTGCAGAGGCAGCTCGTCGGGAGCAGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489511.5
CDS GCA 72 bp CCAGCCAGCCCAGGGCTCCCTGCCAACAGCAACTGCTaGACTCACACATGGACTCGTAACTGTCCGGGTACC +
Preference number: 6 (lower is better)
Translates to: PASPGLPANSNC*THTWTRNCPGT
Trigger: GGTACCCGGACAGTTACGAGTCCATGTGTGAGTGCAGCAGTTGCTGTTGGCAGGGAGCCCTGGGCTGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498611.5
CDS CCA 72 bp CCAGCTCCTCCACAAGCTCCTCCAAACGGTCGGCCTTaGGGCCCAGGCCACCCACTCTCAAGTCAAAGGACA +
Preference number: 6 (lower is better)
Translates to: PAPPQAPPNGRP*GPGHPLSSQRT
Trigger: TGTCCTTTGACTTGAGAGTGGGTGGCCTGGGCCCCAAGGCCGACCGTTTGGAGGAGCTTGTGGAGGAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000498611.5
CDS CCA 72 bp GCCGGGTGGGAGCTATTTCAGAAGCGTAGTCCCCTGTaGGAAGACCACCCCCTGACACCTGCCCAAAGAGCC +
Preference number: 6 (lower is better)
Translates to: AGWELFQKRSPL*EDHPLTPAQRA
Trigger: GGCTCTTTGGGCAGGTGTCAGGGGGTGGTCTTCCCACAGGGGACTACGCTTCTGAAATAGCTCCCACCCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000491449.5
CDS TCA 72 bp GTCTCTCTCGAACCTGTCACCACAAGGGTCACCAAATaGGAAGAGCCCGACGGTGGGCAGGCCAGTGCCTGG +
Preference number: 6 (lower is better)
Translates to: VSLEPVTTRVTK*EEPDGGQASAW
Trigger: CCAGGCACTGGCCTGCCCACCGTCGGGCTCTTCTCATTTGGTGACCCTTGTGGTGACAGGTTCGAGAGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000498611.5
CDS TCA 72 bp CTGCTCACGCTTCCGGGCATCCAAGGCCATCCGTTCTaGCATCTGCCGGTCACTCAGTGCACTCAGGACCCT +
Preference number: 6 (lower is better)
Translates to: LLTLPGIQGHPF*HLPVTQCTQDP
Trigger: AGGGTCCTGAGTGCACTGAGTGACCGGCAGATGTCAGAACGGATGGCCTTGGATGCCCGGAAGCGTGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000473946.1
ENST00000489511.5
ENST00000491449.5
ENST00000498611.5
CDS GCA 72 bp TCTCCACAGTGCCTTCTGCTCCCGACGAGCTGCCTCTaGAGAGAGCTTGCTGTAGTGGTCGACCAGTGCCTG +
Preference number: 6 (lower is better)
Translates to: SPQCLLLPTSCL*RELAVVVDQCL
Trigger: CAGGCACTGGTCGACCACTACAGCAAGCTCTCTGCAGAGGCAGCTCGTCGGGAGCAGAAGGCACTGTGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000491449.5
ENST00000498611.5
CDS GCA 72 bp TCCAGTCGGTGCCTCTGGATTCTCCACAGTGCCTTCTaGTCCCGACGAGCTGCCTCTGCAGAGAGCTTGCTG +
Preference number: 6 (lower is better)
Translates to: SSRCLWILHSAF*SRRAASAESLL
Trigger: CAGCAAGCTCTCTGCAGAGGCAGCTCGTCGGGAGCAGAAGGCACTGTGGAGAATCCAGAGGCACCGACTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000489511.5
ENST00000491449.5
ENST00000498611.5
CDS GCA 72 bp TTCATGAGCACGGGCAGCGTCAGCAACTCGCTCAGCTaGACAGCAGTCTCATCAGCGGCAGACTGGACCTGG +
Preference number: 6 (lower is better)
Translates to: FMSTGSVSNSLS*TAVSSAADWTW
Trigger: CCAGGTCCAGTCTGCCGCTGATGAGACTGCTGTGCAGCTGAGCGAGTTGCTGACGCTGCCCGTGCTCATGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248846.10
ENST00000425018.1
ENST00000439308.6
ENST00000491449.5
ENST00000498611.5
CDS GCA 72 bp TCTCCACAGTGCCTTCTGCTCCCGACGAGCTGCCTCTaGAGAGAGCTTGCTGTAGTGGTCGACCAGTGCCTC +
Preference number: 6 (lower is better)
Translates to: SPQCLLLPTSCL*RELAVVVDQCL
Trigger: GAGGCACTGGTCGACCACTACAGCAAGCTCTCTGCAGAGGCAGCTCGTCGGGAGCAGAAGGCACTGTGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489511.5
CDS CCA 72 bp TGTAGGACGCCCCCAGCAAGCAGCTGGAGCTCCCCTTaGTGGAGCCTGCAGAACTTGTCGAAAGCGTCCCTT +
Preference number: 6 (lower is better)
Translates to: CRTPPASSWSSP*WSLQNLSKASL
Trigger: AAGGGACGCTTTCGACAAGTTCTGCAGGCTCCACCAAGGGGAGCTCCAGCTGCTTGCTGGGGGCGTCCTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000434349.1
ENST00000439308.6
ENST00000498611.5
CDS CCA 72 bp CCACAAAGGCCTGGGCCGGCTGGCAGAGCGAAAACGTaGCAGACACGACCCCAATCAAGACGTTCAGCACGT +
Preference number: 6 (lower is better)
Translates to: PQRPGPAGRAKT*QTRPQSRRSAR
Trigger: ACGTGCTGAACGTCTTGATTGGGGTCGTGTCTGCCACGTTTTCGCTCTGCCAGCCGGCCCAGGCCTTTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000434349.1
ENST00000439308.6
ENST00000498611.5
CDS CAA 72 bp CTCAGGCCACTGGTGAAGGCCTGGAACACGAGGCCCTaGCTGTACAAAGAGTCCAGGACGGGCTGCAGAGAG +
Preference number: 6 (lower is better)
Translates to: LRPLVKAWNTRP*LYKESRTGCRE
Trigger: CTCTCTGCAGCCCGTCCTGGACTCTTTGTACAGCAAGGGCCTCGTGTTCCAGGCCTTCACCAGTGGCCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000434349.1
ENST00000439308.6
ENST00000498611.5
CDS GCA 72 bp AAGAGCATTGTAGGCCACCTTCTTGAGGCTCCGCTTTaGCCTCTTCCGGTTCACACTGCGCTGGCCCAGGTG +
Preference number: 6 (lower is better)
Translates to: KSIVGHLLEAPL*PLPVHTALAQV
Trigger: CACCTGGGCCAGCGCAGTGTGAACCGGAAGAGGGCAAAGCGGAGCCTCAAGAAGGTGGCCTACAATGCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000498611.5
CDS GCA 72 bp CTGGATTCTCCACAGTGCCTTCTGCTCCCGACGAGCTaGCTCTGCAGAGAGCTTGCTGTAGTGGTCGACCAG +
Preference number: 6 (lower is better)
Translates to: LDSPQCLLLPTS*LCRELAVVVDQ
Trigger: CTGGTCGACCACTACAGCAAGCTCTCTGCAGAGGCAGCTCGTCGGGAGCAGAAGGCACTGTGGAGAATCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000489511.5
ENST00000491449.5
ENST00000498611.5
CDS CCA 72 bp CTCATAGGTAAGTGCGGCTTCCCACAGGTCCACGTCTaGGGTCACGCTGGGCTCAGACTGGGAATCAGGAGT +
Preference number: 6 (lower is better)
Translates to: LIGKCGFPQVHV*GHAGLRLGIRS
Trigger: ACTCCTGATTCCCAGTCTGAGCCCAGCGTGACCCCAGACGTGGACCTGTGGGAAGCCGCACTTACCTATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000434349.1
ENST00000439308.6
ENST00000498611.5
CDS CCA 72 bp GATAACAGCACAGGGAGACAGACGCAGATGCTGTGCTaGACAAATGCCCTGTCTCAGCCGAGCGCGGTGGCT +
Preference number: 6 (lower is better)
Translates to: DNSTGRQTQMLC*TNALSQPSAVA
Trigger: AGCCACCGCGCTCGGCTGAGACAGGGCATTTGTCCAGCACAGCATCTGCGTCTGTCTCCCTGTGCTGTTATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473946.1
CDS CCA 72 bp GGGCTCCCTGCCAACAGCAACTGCTGCACTCACACATaGACTCGTAACTGTCCGGGTACCGCTCCAAGTGGT +
Preference number: 6 (lower is better)
Translates to: GLPANSNCCTHT*TRNCPGTAPSG
Trigger: ACCACTTGGAGCGGTACCCGGACAGTTACGAGTCCATGTGTGAGTGCAGCAGTTGCTGTTGGCAGGGAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498611.5
CDS CAA 72 bp GACGGAACTGTGCGCTTGAGGTGGAAGCAGACGTCCTaGAGCGCCCACATCATGAGCTTCAGCTGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: DGTVRLRWKQTS*SAHIMSFSCSR
Trigger: CCTGCTGCAGCTGAAGCTCATGATGTGGGCGCTCAAGGACGTCTGCTTCCACCTCAAGCGCACAGTTCCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425018.1
CDS CAA 90 bp GCTGCAGCTGACGGAACTGTGCGCTTGAGGTGGAAGCAGACGTCCTaGAGCGCCCACATCATGAGCTTCAGCTGCAGCAGGAAGGAGAAG +
Preference number: 6 (lower is better)
Translates to: AAADGTVRLRWKQTS*SAHIMSFSCSRKEK
Trigger: CTTCTCCTTCCTGCTGCAGCTGAAGCTCATGATGTGGGCGCTCAAGGACGTCTGCTTCCACCTCAAGCGCACAGTTCCGTCAGCTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425018.1
CDS GCA 72 bp GTTGATAACAGCACAGGGAGACAGACGCAGATGCTGTaGTGGACAAATGCCCTGTCTCAGCCGAGCGCGGTG +
Preference number: 6 (lower is better)
Translates to: VDNSTGRQTQML*WTNALSQPSAV
Trigger: CACCGCGCTCGGCTGAGACAGGGCATTTGTCCAGCACAGCATCTGCGTCTGTCTCCCTGTGCTGTTATCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473946.1
CDS CCA 72 bp CACAGGTCCACGTCTGGGGTCACGCTGGGCTCAGACTaGGAATCAGGAGTCAAGTTGGACGCTGACTGGAAT +
Preference number: 6 (lower is better)
Translates to: HRSTSGVTLGSD*ESGVKLDADWN
Trigger: ATTCCAGTCAGCGTCCAACTTGACTCCTGATTCCCAGTCTGAGCCCAGCGTGACCCCAGACGTGGACCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000434349.1
ENST00000439308.6
ENST00000498611.5
CDS CCA 72 bp AGAAAACGAAGCCGTGCACTCTCCAGTCGGTGCCTCTaGATTCTCCACAGTGCCTTCTGCTCCCGACGAGCT +
Preference number: 6 (lower is better)
Translates to: RKRSRALSSRCL*ILHSAFCSRRA
Trigger: AGCTCGTCGGGAGCAGAAGGCACTGTGGAGAATCCAGAGGCACCGACTGGAGAGTGCACGGCTTCGTTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000489511.5
ENST00000491449.5
ENST00000498611.5
CDS CAA 72 bp CCTGGCCGCCTGGCGTCGCTCCTGGTCCTTCACAAATaGTTCTTTCAGCCTCTGAAACTGCTCACGCTTCCG +
Preference number: 6 (lower is better)
Translates to: PGRLASLLVLHK*FFQPLKLLTLP
Trigger: CGGAAGCGTGAGCAGTTTCAGAGGCTGAAAGAACAATTTGTGAAGGACCAGGAGCGACGCCAGGCGGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000473946.1
ENST00000489511.5
ENST00000491449.5
ENST00000498611.5
CDS GCA 72 bp TCAGCAGGGACAGCAGTACAGGGTAGTGCTCGTTGCTaGAGTTGTGCAGAGCCTCCTGGTAGAGGTAGGACA +
Preference number: 6 (lower is better)
Translates to: SAGTAVQGSARC*SCAEPPGRGRT
Trigger: TGTCCTACCTCTACCAGGAGGCTCTGCACAACTGCAGCAACGAGCACTACCCTGTACTGCTGTCCCTGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000434349.1
ENST00000439308.6
ENST00000498611.5
CDS CCA 72 bp CACCACAAGACAACGCGCAGAACAGCTAAGGATGCCTaGATAAGGCAGAACGCCCACAGCCACTCTGGGTTC +
Preference number: 6 (lower is better)
Translates to: HHKTTRRTAKDA*IRQNAHSHSGF
Trigger: GAACCCAGAGTGGCTGTGGGCGTTCTGCCTTATCCAGGCATCCTTAGCTGTTCTGCGCGTTGTCTTGTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473946.1
CDS TCA 72 bp TTGCAATTTCCATACGTAATTCCTTCTCCTCCTTGCTaGCAGAGCTGTGGCGGGCCACCCTCTCCATGCGCC +
Preference number: 6 (lower is better)
Translates to: LQFPYVIPSPPC*QSCGGPPSPCA
Trigger: GGCGCATGGAGAGGGTGGCCCGCCACAGCTCTGTCAGCAAGGAGGAGAAGGAATTACGTATGGAAATTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000473946.1
ENST00000491449.5
ENST00000498611.5
CDS GCA 72 bp TCTAAGAGAAAACGAAGCCGTGCACTCTCCAGTCGGTaGCTCTGGATTCTCCACAGTGCCTTCTGCTCCCGA +
Preference number: 6 (lower is better)
Translates to: SKRKRSRALSSR*LWILHSAFCSR
Trigger: TCGGGAGCAGAAGGCACTGTGGAGAATCCAGAGGCACCGACTGGAGAGTGCACGGCTTCGTTTTCTCTTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000489511.5
ENST00000491449.5
ENST00000498611.5
CDS CCA 72 bp CTGACATCTGCCGGTCACTCAGTGCACTCAGGACCCTaGATGCTGCTTCCCGGGCATGAGCGATTAATTCTT +
Preference number: 6 (lower is better)
Translates to: LTSAGHSVHSGP*MLLPGHERLIL
Trigger: AAGAATTAATCGCTCATGCCCGGGAAGCAGCATCCAGGGTCCTGAGTGCACTGAGTGACCGGCAGATGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000473946.1
ENST00000489511.5
ENST00000491449.5
ENST00000498611.5
CDS TCA 72 bp AAGTTGGACGCTGACTGGAATCCTTCGTCTTCCCACTaGTCCACACTCGGTGGGACCTTAATAGCCAGCCCA +
Preference number: 6 (lower is better)
Translates to: KLDADWNPSSSH*STLGGTLIASP
Trigger: TGGGCTGGCTATTAAGGTCCCACCGAGTGTGGATCAGTGGGAAGACGAAGGATTCCAGTCAGCGTCCAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000498611.5
CDS CCA 72 bp TCACGCTGGGCTCAGACTGGGAATCAGGAGTCAAGTTaGACGCTGACTGGAATCCTTCGTCTTCCCACTGAT +
Preference number: 6 (lower is better)
Translates to: SRWAQTGNQESS*TLTGILRLPTD
Trigger: ATCAGTGGGAAGACGAAGGATTCCAGTCAGCGTCCAACTTGACTCCTGATTCCCAGTCTGAGCCCAGCGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248846.10
ENST00000434349.1
ENST00000439308.6
ENST00000498611.5
CDS CCA 72 bp AAGAGACAGGACCCCAAACAGTACGCAGGCCTCGCCTaGACCCTAATCCATACAAACCACCACAAGACAACG +
Preference number: 6 (lower is better)
Translates to: KRQDPKQYAGLA*TLIHTNHHKTT
Trigger: CGTTGTCTTGTGGTGGTTTGTATGGATTAGGGTCCAGGCGAGGCCTGCGTACTGTTTGGGGTCCTGTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473946.1
CDS CAA 72 bp GTTGTTAAGGAAGTAGTCTCGTTTTCTCGGCAGAACTaGAGGGGGACCACTCCCTGCCAGCTGAACCAGGAG +
Preference number: 6 (lower is better)
Translates to: VVKEVVSFSRQN*RGTTPCQLNQE
Trigger: CTCCTGGTTCAGCTGGCAGGGAGTGGTCCCCCTCAAGTTCTGCCGAGAAAACGAGACTACTTCCTTAACAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000498611.5
CDS CAA 72 bp ATTCAAAGCCTGCTTCACCGATCGTGCCCCATGATTTaGAGCTTCTCACCAGCAGGCAACTGGGCTCAAACC +
Preference number: 6 (lower is better)
Translates to: IQSLLHRSCPMI*SFSPAGNWAQT
Trigger: GGTTTGAGCCCAGTTGCCTGCTGGTGAGAAGCTCAAAATCATGGGGCACGATCGGTGAAGCAGGCTTTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473946.1
CDS GCA 72 bp ATGGTCTTTCCGCAGACGTATATGTCGTGGGCAATGTaGTTCAGAAACACGGGAACACAGTCCTCCACCTCT +
Preference number: 6 (lower is better)
Translates to: MVFPQTYMSWAM*FRNTGTQSSTS
Trigger: AGAGGTGGAGGACTGTGTTCCCGTGTTTCTGAAGCACATTGCCCACGACATATACGTCTGCGGAAAGACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000473946.1
ENST00000491449.5
ENST00000498611.5
CDS TCA 72 bp GGCCCAGGCCACCCACTCTCAAGTCAAAGGACAACATaGGGATCTTGTTTCTCGCTGGTAGTTTTGACATGT +
Preference number: 6 (lower is better)
Translates to: GPGHPLSSQRTT*GSCFSLVVLTC
Trigger: ACATGTCAAAACTACCAGCGAGAAACAAGATCCTCATGTTGTCCTTTGACTTGAGAGTGGGTGGCCTGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000498611.5
CDS CCA 72 bp AGCAGGTTAATGGTCTTTCCGCAGACGTATATGTCGTaGGCAATGTGCTTCAGAAACACGGGAACACAGTCC +
Preference number: 6 (lower is better)
Translates to: SRLMVFPQTYMS*AMCFRNTGTQS
Trigger: GGACTGTGTTCCCGTGTTTCTGAAGCACATTGCCCACGACATATACGTCTGCGGAAAGACCATTAACCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000473946.1
ENST00000491449.5
ENST00000498611.5
CDS TCA 72 bp AGTGCACTCAGGACCCTGGATGCTGCTTCCCGGGCATaGGCGATTAATTCTTGTTTTGCAATTTCCATACGT +
Preference number: 6 (lower is better)
Translates to: SALRTLDAASRA*AINSCFAISIR
Trigger: ACGTATGGAAATTGCAAAACAAGAATTAATCGCTCATGCCCGGGAAGCAGCATCCAGGGTCCTGAGTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248846.10
ENST00000439308.6
ENST00000473946.1
ENST00000489511.5
ENST00000491449.5
ENST00000498611.5
CDS CCA 72 bp GGATGCCTGGATAAGGCAGAACGCCCACAGCCACTCTaGGTTCAGCATATTGGTCTTTCTACCTTAATGTAT +
Preference number: 6 (lower is better)
Translates to: GCLDKAERPQPL*VQHIGLSTLMY
Trigger: ATACATTAAGGTAGAAAGACCAATATGCTGAACCCAGAGTGGCTGTGGGCGTTCTGCCTTATCCAGGCATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473946.1