Pregenerated sensors for TUBG2 (Homo sapiens)
Ensembl gene IDs: ENSG00000037042Ensembl transcript IDs: ENST00000251412.8, ENST00000588870.1, ENST00000590396.1
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAGCTCACGGGCTGGAGATGAACCAAGAAGGGTTGTCCATGAGGTaGAGCTGGGTCAGAGGGAGCAGGCATGGTCGAGGCTGTGGTTAC | + |
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Preference number: 1 (lower is better) Translates to: PAHGLEMNQEGLSMR*SWVRGSRHGRGCGY Trigger: GTAACCACAGCCTCGACCATGCCTGCTCCCTCTGACCCAGCTTCACCTCATGGACAACCCTTCTTGGTTCATCTCCAGCCCGTGAGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000251412.8 |
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| 3UTR CCA 72 bp | GTCCATGAGGTGAAGCTGGGTCAGAGGGAGCAGGCATaGTCGAGGCTGTGGTTACCATCTAGAAGGAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: VHEVKLGQREQA*SRLWLPSRRRR Trigger: CCTTCTCCTTCTAGATGGTAACCACAGCCTCGACCATGCCTGCTCCCTCTGACCCAGCTTCACCTCATGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000251412.8 |
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| CDS-3UTR GCA 90 bp | AGGACCAGCTCACGGGCTGGAGATGAACCAAGAAGGGTTGTCCATGAGGTGAAGCGCGGATGCTCGGTCTaGGCGTGTGCAGCGCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: RTSSRAGDEPRRVVHEVKRGCSV*ACAAQA Trigger: GGCCTGCGCTGCACACGCGCAGACCGAGCATCCGCG...CTTCACCTCATGGACAACCCTTCTTGGTTCATCTCCAGCCCGTGAGCTGGTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000251412.8 |
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| CDS-3UTR CCA 90 bp | CATGGTCGAGGCTGTGGTTACCATCTAGAAGGAGAAGGAGTAGTGGGGAGGGAACCTCTCCTCGGCCGGTaGGCCGGGGAGCCCAACCTG | + |
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Preference number: 4 (lower is better) Translates to: HGRGCGYHLEGEGVVGREPLLGR*AGEPNL Trigger: CAGGTTGGGCTCCCCGGCCCACCGGCCGAGGAGAGG...TTCCCTCCCCACTACTCCTTCTCCTTCTAGATGGTAACCACAGCCTCGACCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000251412.8 |
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| CDS-3UTR CCA 90 bp | CAGAGGGAGCAGGCATGGTCGAGGCTGTGGTTACCATCTAGAAGGAGAAGGAGTGCGCCAGCCCCGGCCTaGCGAGAGTCACGGCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: QREQAWSRLWLPSRRRRSAPAPA*RESRLR Trigger: TCTCAGCCGTGACTCTCGCCAGGCCGGGGCTGGCGC...ACTCCTTCTCCTTCTAGATGGTAACCACAGCCTCGACCATGCCTGCTCCCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251412.8 |
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| CDS-3UTR CCA 90 bp | CTGGGTCAGAGGGAGCAGGCATGGTCGAGGCTGTGGTTACCATCTAGAAGGAGAATCGCTCTTCAGACGTaGGCGCGCCAGCCCCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: LGQREQAWSRLWLPSRRRIALQT*ARQPRP Trigger: AGGCCGGGGCTGGCGCGCCCACGTCTGAAGAGCGAT...TCTCCTTCTAGATGGTAACCACAGCCTCGACCATGCCTGCTCCCTCTGACCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251412.8 |
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| CDS-3UTR GCA 90 bp | ACCAGCTCACGGGCTGGAGATGAACCAAGAAGGGTTGTCCATGAGGTGAAGCTGCTCGGTCTGCGCGTGTaGAGCGCAGGCCTCTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: TSSRAGDEPRRVVHEVKLLGLRV*SAGLSS Trigger: CGAGGAGAGGCCTGCGCTGCACACGCGCAGACCGAG...CAGCTTCACCTCATGGACAACCCTTCTTGGTTCATCTCCAGCCCGTGAGCTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000251412.8 |
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| CDS-3UTR CCA 90 bp | CAGAGGGAGCAGGCATGGTCGAGGCTGTGGTTACCATCTAGAAGGAGAAGGAGTCAGGAGCGCAGGACGTaGGGAGCGCGCGCTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: QREQAWSRLWLPSRRRRSQERRT*GARALF Trigger: GAAGAGAGCGCGCGCTCCCCACGTCCTGCGCTCCTG...ACTCCTTCTCCTTCTAGATGGTAACCACAGCCTCGACCATGCCTGCTCCCTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000251412.8 |
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| CDS-3UTR TCA 90 bp | AGAGGGAGCAGGCATGGTCGAGGCTGTGGTTACCATCTAGAAGGAGAAGGAGTAGGCGAGAGTCACGGCTaGGACGAATGCCCGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: RGSRHGRGCGYHLEGEGVGESHG*DECPAA Trigger: GGCTGCCGGGCATTCGTCTCAGCCGTGACTCTCGCC...TACTCCTTCTCCTTCTAGATGGTAACCACAGCCTCGACCATGCCTGCTCCCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000251412.8 |
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| CDS-3UTR TCA 90 bp | AGAGGGAGCAGGCATGGTCGAGGCTGTGGTTACCATCTAGAAGGAGAAGGAGTACCCCCAGCGATGGAGTaGCACAGCACGAAGCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: RGSRHGRGCGYHLEGEGVPPAME*HSTKPS Trigger: GGAGGGCTTCGTGCTGTGTCACTCCATCGCTGGGGG...TACTCCTTCTCCTTCTAGATGGTAACCACAGCCTCGACCATGCCTGCTCCCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000251412.8 |
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| CDS-3UTR TCA 90 bp | CAGAGGGAGCAGGCATGGTCGAGGCTGTGGTTACCATCTAGAAGGAGAAGGAGTCCTCACGCTGGCCACTaGCTGGTCTGTAGTGAGCGG | + |
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Preference number: 4 (lower is better) Translates to: QREQAWSRLWLPSRRRRSPHAGH*LVCSER Trigger: CCGCTCACTACAGACCAGTCAGTGGCCAGCGTGAGG...ACTCCTTCTCCTTCTAGATGGTAACCACAGCCTCGACCATGCCTGCTCCCTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000251412.8 |
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| CDS-3UTR TCA 90 bp | CATGGTCGAGGCTGTGGTTACCATCTAGAAGGAGAAGGAGTAGTGGGGAGGGAAGCTCTCTTCGCCTCTTaGCGCGGATGCTCGGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: HGRGCGYHLEGEGVVGREALFAS*RGCSVC Trigger: GCAGACCGAGCATCCGCGTCAAGAGGCGAAGAGAGC...TTCCCTCCCCACTACTCCTTCTCCTTCTAGATGGTAACCACAGCCTCGACCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251412.8 |
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| CDS-3UTR CCA 90 bp | AGAGGGAGCAGGCATGGTCGAGGCTGTGGTTACCATCTAGAAGGAGAAGGAGTAAGGCTCTTGTGGACCTaGGTGGGGTCCACCTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: RGSRHGRGCGYHLEGEGVRLLWT*VGSTSP Trigger: GGGAGAGGTGGACCCCACCCAGGTCCACAAGAGCCT...TACTCCTTCTCCTTCTAGATGGTAACCACAGCCTCGACCATGCCTGCTCCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251412.8 |
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| CDS-3UTR TCA 90 bp | CATGGTCGAGGCTGTGGTTACCATCTAGAAGGAGAAGGAGTAGTGGGGAGGGAAGGGTTGTCCATGAGGTaGAGCTGGGTCAGAGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: HGRGCGYHLEGEGVVGREGLSMR*SWVRGS Trigger: GCTCCCTCTGACCCAGCTTCACCTCATGGACAACCC...TTCCCTCCCCACTACTCCTTCTCCTTCTAGATGGTAACCACAGCCTCGACCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251412.8 |
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| CDS-3UTR GCA 90 bp | AGGACCAGCTCACGGGCTGGAGATGAACCAAGAAGGGTTGTCCATGAGGTGAAGTCCTCCTTACGGAACTaGTCGAGGAAGGCATCCCGC | + |
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Preference number: 4 (lower is better) Translates to: RTSSRAGDEPRRVVHEVKSSLRN*SRKASR Trigger: GCGGGATGCCTTCCTCGAGCAGTTCCGTAAGGAGGA...CTTCACCTCATGGACAACCCTTCTTGGTTCATCTCCAGCCCGTGAGCTGGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000251412.8 |
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| CDS-3UTR CCA 90 bp | ACCAGCTCACGGGCTGGAGATGAACCAAGAAGGGTTGTCCATGAGGTGAAGCTGGGCTGGGTGGCCGCATaGTACTCATCAATGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: TSSRAGDEPRRVVHEVKLGWVAA*YSSMSS Trigger: GGAGCTCATTGATGAGTACCATGCGGCCACCCAGCC...CAGCTTCACCTCATGGACAACCCTTCTTGGTTCATCTCCAGCCCGTGAGCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000251412.8 |
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| CDS-3UTR TCA 90 bp | CAGAGGGAGCAGGCATGGTCGAGGCTGTGGTTACCATCTAGAAGGAGAAGGAGTAAGAAGGGTTGTCCATaGGGTGAAGCTGGGTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: QREQAWSRLWLPSRRRRSKKGCP*GEAGSE Trigger: CTCTGACCCAGCTTCACCTCATGGACAACCCTTCTT...ACTCCTTCTCCTTCTAGATGGTAACCACAGCCTCGACCATGCCTGCTCCCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000251412.8 |
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| CDS-3UTR TCA 90 bp | CATGGTCGAGGCTGTGGTTACCATCTAGAAGGAGAAGGAGTAGTGGGGAGGGAACTCACGGGCTGGAGATaGACCAAGAAGGGTTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: HGRGCGYHLEGEGVVGRELTGWR*TKKGCP Trigger: TGGACAACCCTTCTTGGTTCATCTCCAGCCCGTGAG...TTCCCTCCCCACTACTCCTTCTCCTTCTAGATGGTAACCACAGCCTCGACCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251412.8 |
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| CDS-3UTR TCA 90 bp | GAGCAGGCATGGTCGAGGCTGTGGTTACCATCTAGAAGGAGAAGGAGTAGTGGGCTTGAGTGTCAGGAGTaGATTGTAGGGCTGAACCAC | + |
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Preference number: 4 (lower is better) Translates to: EQAWSRLWLPSRRRRSSGLECQE*IVGLNH Trigger: GTGGTTCAGCCCTACAATTCACTCCTGACACTCAAG...CCCACTACTCCTTCTCCTTCTAGATGGTAACCACAGCCTCGACCATGCCTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000251412.8 |
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| CDS-3UTR CCA 90 bp | CAGAGGGAGCAGGCATGGTCGAGGCTGTGGTTACCATCTAGAAGGAGAAGGAGTGCATGGTCGAGGCTGTaGTTACCATCTAGAAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: QREQAWSRLWLPSRRRRSAWSRL*LPSRRR Trigger: TCTCCTTCTAGATGGTAACCACAGCCTCGACCATGC...ACTCCTTCTCCTTCTAGATGGTAACCACAGCCTCGACCATGCCTGCTCCCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000251412.8 |
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| CDS-3UTR GCA 90 bp | CAGAGGGAGCAGGCATGGTCGAGGCTGTGGTTACCATCTAGAAGGAGAAGGAGTCGCAGCTTGTCAAACTaGTGGCAGGAACTTTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: QREQAWSRLWLPSRRRRSRSLSN*WQELSK Trigger: CTTTGAAAGTTCCTGCCAGCAGTTTGACAAGCTGCG...ACTCCTTCTCCTTCTAGATGGTAACCACAGCCTCGACCATGCCTGCTCCCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000251412.8 |
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| CDS-3UTR TCA 90 bp | CTGGGTCAGAGGGAGCAGGCATGGTCGAGGCTGTGGTTACCATCTAGAAGGAGACTGCTTCTCGGTCTATaGTGTCAAAGATGTCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: LGQREQAWSRLWLPSRRRLLLGL*CQRCLH Trigger: ATGAAGACATCTTTGACATCATAGACCGAGAAGCAG...TCTCCTTCTAGATGGTAACCACAGCCTCGACCATGCCTGCTCCCTCTGACCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000251412.8 |
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| CDS-3UTR TCA 90 bp | AGCATATTAAAAGTTAGGGCATGGAAGGGAGGAAGCAGGACCAGCTCACGGGCTTCATCAATGAGCTCCTaGACAACCTCCCTAGACCTG | + |
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Preference number: 4 (lower is better) Translates to: SILKVRAWKGGSRTSSRASSMSS*TTSLDL Trigger: CAGGTCTAGGGAGGTTGTTCAGGAGCTCATTGATGA...AGCCCGTGAGCTGGTCCTGCTTCCTCCCTTCCATGCCCTAACTTTTAATATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251412.8 |
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| CDS-3UTR TCA 90 bp | ACCAGCTCACGGGCTGGAGATGAACCAAGAAGGGTTGTCCATGAGGTGAAGCTGTCAAAGATGTCTTCATaGATTTTCTCACCCTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: TSSRAGDEPRRVVHEVKLSKMSS*IFSPWE Trigger: CTCCCAGGGTGAGAAAATTCATGAAGACATCTTTGA...CAGCTTCACCTCATGGACAACCCTTCTTGGTTCATCTCCAGCCCGTGAGCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251412.8 |
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| CDS-3UTR CCA 90 bp | AGCATATTAAAAGTTAGGGCATGGAAGGGAGGAAGCAGGACCAGCTCACGGGCTAGCTTGTCAAACTGCTaGCAGGAACTTTCAAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: SILKVRAWKGGSRTSSRASLSNC*QELSKS Trigger: GCTCTTTGAAAGTTCCTGCCAGCAGTTTGACAAGCT...AGCCCGTGAGCTGGTCCTGCTTCCTCCCTTCCATGCCCTAACTTTTAATATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251412.8 |
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| CDS TCA 90 bp | CTTCAGACGTGGGCGCGCCAGCCCCGGCCTGGCGAGAGTCACGGCTaGGACGAATGCCCGGCAGCCAGGAGCGCAGGACGTGGGGAGCGC | + |
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Preference number: 5 (lower is better) Translates to: LQTWARQPRPGESHG*DECPAARSAGRGER Trigger: GCGCTCCCCACGTCCTGCGCTCCTGGCTGCCGGGCATTCGTCTCAGCCGTGACTCTCGCCAGGCCGGGGCTGGCGCGCCCACGTCTGAAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000251412.8 ENST00000588870.1 |
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| CDS GCA 90 bp | GCGCGCTCTCTTCGCCTCTTGACGCGGATGCTCGGTCTGCGCGTGTaGAGCGCAGGCCTCTCCTCGGCCGGTGGGCCGGGGAGCCCAACC | + |
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Preference number: 5 (lower is better) Translates to: ARSLRLLTRMLGLRV*SAGLSSAGGPGSPT Trigger: GGTTGGGCTCCCCGGCCCACCGGCCGAGGAGAGGCCTGCGCTGCACACGCGCAGACCGAGCATCCGCGTCAAGAGGCGAAGAGAGCGCGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251412.8 ENST00000588870.1 |
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| CDS CCA 90 bp | CTCCCGGGGCATCGCTCTTCAGACGTGGGCGCGCCAGCCCCGGCCTaGCGAGAGTCACGGCTGAGACGAATGCCCGGCAGCCAGGAGCGC | + |
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Preference number: 5 (lower is better) Translates to: LPGHRSSDVGAPAPA*RESRLRRMPGSQER Trigger: GCGCTCCTGGCTGCCGGGCATTCGTCTCAGCCGTGACTCTCGCCAGGCCGGGGCTGGCGCGCCCACGTCTGAAGAGCGATGCCCCGGGAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000251412.8 ENST00000588870.1 |
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| CDS TCA 90 bp | AGCCAGGAGCGCAGGACGTGGGGAGCGCGCGCTCTCTTCGCCTCTTaGCGCGGATGCTCGGTCTGCGCGTGTGCAGCGCAGGCCTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: SQERRTWGARALFAS*RGCSVCACAAQASP Trigger: AGGAGAGGCCTGCGCTGCACACGCGCAGACCGAGCATCCGCGTCAAGAGGCGAAGAGAGCGCGCGCTCCCCACGTCCTGCGCTCCTGGCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251412.8 ENST00000588870.1 |
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| CDS CCA 90 bp | GATGCTCGGTCTGCGCGTGTGCAGCGCAGGCCTCTCCTCGGCCGGTaGGCCGGGGAGCCCAACCTGGGCATCATTTTCTCCCTCAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: DARSARVQRRPLLGR*AGEPNLGIIFSLSS Trigger: ACTGCTGAGGGAGAAAATGATGCCCAGGTTGGGCTCCCCGGCCCACCGGCCGAGGAGAGGCCTGCGCTGCACACGCGCAGACCGAGCATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000251412.8 |
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| CDS CCA 90 bp | GTGGACCCAAGATGCCTGGGTTTGGTAGCTGCCCCAGCCCCGGGCTaGAGGCGCAGCTCTCGGTCTGGGTTATCCAGAGCAGCAGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: VDPRCLGLVAAPAPG*RRSSRSGLSRAAGQ Trigger: CTGCCCTGCTGCTCTGGATAACCCAGACCGAGAGCTGCGCCTCCAGCCCGGGGCTGGGGCAGCTACCAAACCCAGGCATCTTGGGTCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588870.1 |
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| CDS TCA 90 bp | GCTGGAGCCTTAAGGCCTGAGGAGCCCAGTTTTAGTCTCAGAGGCTaGCACGATCAGAGGGTGGACCCAAGATGCCTGGGTTTGGTAGCT | + |
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Preference number: 5 (lower is better) Translates to: AGALRPEEPSFSLRG*HDQRVDPRCLGLVA Trigger: AGCTACCAAACCCAGGCATCTTGGGTCCACCCTCTGATCGTGTCAGCCTCTGAGACTAAAACTGGGCTCCTCAGGCCTTAAGGCTCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588870.1 |
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| CDS CCA 90 bp | AAGAGCTGTAAGCCAGGAACATATCGCACCCAGCATGGGGAGAGATaGAGAGGCAGTCTCCAAGGATCTGGGGGAGAGACTTCGGCTTGG | + |
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Preference number: 5 (lower is better) Translates to: KSCKPGTYRTQHGER*RGSLQGSGGETSAW Trigger: CCAAGCCGAAGTCTCTCCCCCAGATCCTTGGAGACTGCCTCTCCATCTCTCCCCATGCTGGGTGCGATATGTTCCTGGCTTACAGCTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000590396.1 |
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| CDS-3UTR CAA 90 bp | AGCATATTAAAAGTTAGGGCATGGAAGGGAGGAAGCAGGACCAGCTCACGGGCTCGCTCTCTTCGCCTCTaGACGCGGATGCTCGGTCTG | + |
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Preference number: 5 (lower is better) Translates to: SILKVRAWKGGSRTSSRARSLRL*TRMLGL Trigger: CAGACCGAGCATCCGCGTCAAGAGGCGAAGAGAGCG...AGCCCGTGAGCTGGTCCTGCTTCCTCCCTTCCATGCCCTAACTTTTAATATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251412.8 |
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| CDS CCA 90 bp | CATGAGGTGAAGCTGGGTCAGAGGGAGCAGGCATGGTCGAGGCTGTaGTTACCATCTAGAAGGAGAAGGAGTAGTGGGGAGGGAAATCAC | + |
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Preference number: 5 (lower is better) Translates to: HEVKLGQREQAWSRL*LPSRRRRSSGEGNH Trigger: GTGATTTCCCTCCCCACTACTCCTTCTCCTTCTAGATGGTAACCACAGCCTCGACCATGCCTGCTCCCTCTGACCCAGCTTCACCTCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251412.8 |
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| CDS-3UTR CAA 90 bp | AGCATATTAAAAGTTAGGGCATGGAAGGGAGGAAGCAGGACCAGCTCACGGGCTTCCCGCTTCCGCAGCTaGTCAAACTGCTGGCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: SILKVRAWKGGSRTSSRASRFRS*SNCWQE Trigger: TTCCTGCCAGCAGTTTGACAAGCTGCGGAAGCGGGA...AGCCCGTGAGCTGGTCCTGCTTCCTCCCTTCCATGCCCTAACTTTTAATATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251412.8 |
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| CDS CCA 90 bp | CCAATGTCTCAAAGCTTCCTCTTATGCATCCAGGCTGAGGCTCCTTaGGAAGGTTTGGAGCTGGAGAAGCAGCTGAATGACTCATGCCTA | + |
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Preference number: 5 (lower is better) Translates to: PMSQSFLLCIQAEAP*EGLELEKQLNDSCL Trigger: TAGGCATGAGTCATTCAGCTGCTTCTCCAGCTCCAAACCTTCCCAAGGAGCCTCAGCCTGGATGCATAAGAGGAAGCTTTGAGACATTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590396.1 |
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| CDS CCA 90 bp | AGATGGAGAGGCAGTCTCCAAGGATCTGGGGGAGAGACTTCGGCTTaGTTCATTCTCCATTCCCAAAACGCCAATGTCTCAAAGCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: RWRGSLQGSGGETSA*FILHSQNANVSKLP Trigger: AGGAAGCTTTGAGACATTGGCGTTTTGGGAATGGAGAATGAACCAAGCCGAAGTCTCTCCCCCAGATCCTTGGAGACTGCCTCTCCATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000590396.1 |
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| CDS TCA 90 bp | ATAACTTCACCTCCAAACTGTCACTTCCATCTGCTTCTCGGTCTATaGTGTCAAAGATGTCTTCATGAATTTTCTCACCCTCTGGATGGG | + |
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Preference number: 5 (lower is better) Translates to: ITSPPNCHFHLLLGL*CQRCLHEFSHPLDG Trigger: CCCATCCAGAGGGTGAGAAAATTCATGAAGACATCTTTGACATCATAGACCGAGAAGCAGATGGAAGTGACAGTTTGGAGGTGAAGTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590396.1 |
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| CDS TCA 72 bp | TGGGCGCGCCAGCCCCGGCCTGGCGAGAGTCACGGCTaGGACGAATGCCCGGCAGCCAGGAGCGCAGGACGT | + |
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Preference number: 6 (lower is better) Translates to: WARQPRPGESHG*DECPAARSAGR Trigger: ACGTCCTGCGCTCCTGGCTGCCGGGCATTCGTCTCAGCCGTGACTCTCGCCAGGCCGGGGCTGGCGCGCCCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251412.8 ENST00000588870.1 |
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| CDS GCA 72 bp | CTTCGCCTCTTGACGCGGATGCTCGGTCTGCGCGTGTaGAGCGCAGGCCTCTCCTCGGCCGGTGGGCCGGGG | + |
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Preference number: 6 (lower is better) Translates to: LRLLTRMLGLRV*SAGLSSAGGPG Trigger: CCCCGGCCCACCGGCCGAGGAGAGGCCTGCGCTGCACACGCGCAGACCGAGCATCCGCGTCAAGAGGCGAAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000251412.8 ENST00000588870.1 |
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| CDS CAA 90 bp | CAGCCAGGAGCGCAGGACGTGGGGAGCGCGCGCTCTCTTCGCCTCTaGACGCGGATGCTCGGTCTGCGCGTGTGCAGCGCAGGCCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: QPGAQDVGSARSLRL*TRMLGLRVCSAGLS Trigger: GGAGAGGCCTGCGCTGCACACGCGCAGACCGAGCATCCGCGTCAAGAGGCGAAGAGAGCGCGCGCTCCCCACGTCCTGCGCTCCTGGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251412.8 ENST00000588870.1 |
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| CDS TCA 72 bp | CGCAGGACGTGGGGAGCGCGCGCTCTCTTCGCCTCTTaGCGCGGATGCTCGGTCTGCGCGTGTGCAGCGCAG | + |
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Preference number: 6 (lower is better) Translates to: RRTWGARALFAS*RGCSVCACAAQ Trigger: CTGCGCTGCACACGCGCAGACCGAGCATCCGCGTCAAGAGGCGAAGAGAGCGCGCGCTCCCCACGTCCTGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251412.8 ENST00000588870.1 |
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| CDS CCA 72 bp | CATCGCTCTTCAGACGTGGGCGCGCCAGCCCCGGCCTaGCGAGAGTCACGGCTGAGACGAATGCCCGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: HRSSDVGAPAPA*RESRLRRMPGS Trigger: GCTGCCGGGCATTCGTCTCAGCCGTGACTCTCGCCAGGCCGGGGCTGGCGCGCCCACGTCTGAAGAGCGATG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000251412.8 ENST00000588870.1 |
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| CDS CCA 72 bp | TCTGCGCGTGTGCAGCGCAGGCCTCTCCTCGGCCGGTaGGCCGGGGAGCCCAACCTGGGCATCATTTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SARVQRRPLLGR*AGEPNLGIIFS Trigger: GGAGAAAATGATGCCCAGGTTGGGCTCCCCGGCCCACCGGCCGAGGAGAGGCCTGCGCTGCACACGCGCAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000251412.8 |
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| CDS CCA 72 bp | AGGGAAAGGGGGACTGGTGGAAGCCAGGCACTTGGGTaGGACCCGAAGGGGCAGAACCAGAGACCGGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: RERGTGGSQALG*DPKGQNQRPAG Trigger: CCCCGCCGGTCTCTGGTTCTGCCCCTTCGGGTCCCACCCAAGTGCCTGGCTTCCACCAGTCCCCCTTTCCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588870.1 |
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| CDS CCA 72 bp | AGATGCCTGGGTTTGGTAGCTGCCCCAGCCCCGGGCTaGAGGCGCAGCTCTCGGTCTGGGTTATCCAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: RCLGLVAAPAPG*RRSSRSGLSRA Trigger: TGCTCTGGATAACCCAGACCGAGAGCTGCGCCTCCAGCCCGGGGCTGGGGCAGCTACCAAACCCAGGCATCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588870.1 |
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| CDS TCA 72 bp | TTAAGGCCTGAGGAGCCCAGTTTTAGTCTCAGAGGCTaGCACGATCAGAGGGTGGACCCAAGATGCCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: LRPEEPSFSLRG*HDQRVDPRCLG Trigger: ACCCAGGCATCTTGGGTCCACCCTCTGATCGTGTCAGCCTCTGAGACTAAAACTGGGCTCCTCAGGCCTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588870.1 |
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| CDS CCA 72 bp | TCACCCTCTGGATGGGAATATCAAAGGTCTCTGGAATaGTCGCTAGGACACCTGGGAGAATCCGCTGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: SPSGWEYQRSLE*SLGHLGESAGP Trigger: TGGGCCAGCGGATTCTCCCAGGTGTCCTAGCGACCATTCCAGAGACCTTTGATATTCCCATCCAGAGGGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590396.1 |
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| CDS CCA 72 bp | GCATGGGGAGAGATGGAGAGGCAGTCTCCAAGGATCTaGGGGAGAGACTTCGGCTTGGTTCATTCTCCATTC | + |
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Preference number: 6 (lower is better) Translates to: AWGEMERQSPRI*GRDFGLVHSPF Trigger: GAATGGAGAATGAACCAAGCCGAAGTCTCTCCCCCAGATCCTTGGAGACTGCCTCTCCATCTCTCCCCATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590396.1 |
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| CDS TCA 72 bp | GCCAATGTCTCAAAGCTTCCTCTTATGCATCCAGGCTaGGGCTCCTTGGGAAGGTTTGGAGCTGGAGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: ANVSKLPLMHPG*GSLGRFGAGEA Trigger: TGCTTCTCCAGCTCCAAACCTTCCCAAGGAGCCTCAGCCTGGATGCATAAGAGGAAGCTTTGAGACATTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590396.1 |
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| CDS CCA 72 bp | GGCAGTCTCCAAGGATCTGGGGGAGAGACTTCGGCTTaGTTCATTCTCCATTCCCAAAACGCCAATGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: GSLQGSGGETSA*FILHSQNANVS Trigger: TGAGACATTGGCGTTTTGGGAATGGAGAATGAACCAAGCCGAAGTCTCTCCCCCAGATCCTTGGAGACTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000590396.1 |
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| CDS CAA 72 bp | AGGCAGTCTCCAAGGATCTGGGGGAGAGACTTCGGCTaGGTTCATTCTCCATTCCCAAAACGCCAATGTCTC | + |
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Preference number: 6 (lower is better) Translates to: RQSPRIWGRDFG*VHSPFPKRQCL Trigger: GAGACATTGGCGTTTTGGGAATGGAGAATGAACCAAGCCGAAGTCTCTCCCCCAGATCCTTGGAGACTGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000590396.1 |
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| CDS CAA 90 bp | GAGATGGAGAGGCAGTCTCCAAGGATCTGGGGGAGAGACTTCGGCTaGGTTCATTCTCCATTCCCAAAACGCCAATGTCTCAAAGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: EMERQSPRIWGRDFG*VHSPFPKRQCLKAS Trigger: GGAAGCTTTGAGACATTGGCGTTTTGGGAATGGAGAATGAACCAAGCCGAAGTCTCTCCCCCAGATCCTTGGAGACTGCCTCTCCATCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000590396.1 |
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| CDS TCA 72 bp | ATCCCACATCTGATGCTCCATAAACGGGTTTTGAATTaGATTGCTCCCCTCATATTACCTATCCAGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: IPHLMLHKRVLN*IAPLILPIQAT Trigger: GGTGGCCTGGATAGGTAATATGAGGGGAGCAATTCAATTCAAAACCCGTTTATGGAGCATCAGATGTGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590396.1 |
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| CDS CAA 72 bp | CCTAAGGGGCCGGTGCCATTCAGATTTATGACTTCCTaGAGAACAAAGATTATATCTTATTCACCTCAATAT | + |
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Preference number: 6 (lower is better) Translates to: PKGPVPFRFMTS*RTKIISYSPQY Trigger: ATATTGAGGTGAATAAGATATAATCTTTGTTCTCAAGGAAGTCATAAATCTGAATGGCACCGGCCCCTTAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590396.1 |
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