Pregenerated sensors for TUBG1 (Homo sapiens)
Ensembl gene IDs: ENSG00000131462Ensembl transcript IDs: ENST00000588056.2, ENST00000589613.1, ENST00000679484.1, ENST00000680617.1, ENST00000681114.1, ENST00000681919.1
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCACTCCCTGCAGCCAGGTCTCTCCCTCCAGCATTCATACATCCCTaGTCCGGTTTTCCCTCTCTTCGGGACGTCATAGAGCCTGTCCCT | + |
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Preference number: 5 (lower is better) Translates to: PLPAARSLPPAFIHP*SGFPSLRDVIEPVP Trigger: AGGGACAGGCTCTATGACGTCCCGAAGAGAGGGAAAACCGGATCAGGGATGTATGAATGCTGGAGGGAGAGACCTGGCTGCAGGGAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000589613.1 ENST00000680617.1 ENST00000681114.1 ENST00000681919.1 |
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| CDS TCA 90 bp | TACAGGGGGAAGGGCAGAGACATCTTAGACTCTGGGCTTCCAAATTaGGACCTGGCCACACTCCCTCGACTTTCATCCAGGGCTCAGGTT | + |
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Preference number: 5 (lower is better) Translates to: YRGKGRDILDSGLPN*DLATLPRLSSRAQV Trigger: AACCTGAGCCCTGGATGAAAGTCGAGGGAGTGTGGCCAGGTCTCAATTTGGAAGCCCAGAGTCTAAGATGTCTCTGCCCTTCCCCCTGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000679484.1 |
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| CDS TCA 90 bp | GGTGGGGGTTGGGGAAAGGATCAGGGCAACAGACCGAAGGCCTGGTaGACATGGCGCTCCCTAACAACTGTCCAGAAGCAGATAAATCTT | + |
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Preference number: 5 (lower is better) Translates to: GGGWGKDQGNRPKAW*TWRSLTTVQKQINL Trigger: AAGATTTATCTGCTTCTGGACAGTTGTTAGGGAGCGCCATGTTCACCAGGCCTTCGGTCTGTTGCCCTGATCCTTTCCCCAACCCCCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000679484.1 |
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| CDS CCA 90 bp | AAGTCTGTAGCCCTACAGGGGGAAGGGCAGAGACATCTTAGACTCTaGGCTTCCAAATTGAGACCTGGCCACACTCCCTCGACTTTCATC | + |
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Preference number: 5 (lower is better) Translates to: KSVALQGEGQRHLRL*ASKLRPGHTPSTFI Trigger: GATGAAAGTCGAGGGAGTGTGGCCAGGTCTCAATTTGGAAGCCCAGAGTCTAAGATGTCTCTGCCCTTCCCCCTGTAGGGCTACAGACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000679484.1 |
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| CDS TCA 90 bp | GCACTTAGAATGACCTGGCACACTGCATTAGCTAGTGTAGGCGCTTaGCAATATTACATAGTCCACTCCCTGCAGCCAGGTCTCTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: ALRMTWHTALASVGA*QYYIVHSLQPGLSL Trigger: GAGGGAGAGACCTGGCTGCAGGGAGTGGACTATGTAATATTGTCAAGCGCCTACACTAGCTAATGCAGTGTGCCAGGTCATTCTAAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000589613.1 ENST00000680617.1 ENST00000681114.1 ENST00000681919.1 |
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| CDS TCA 90 bp | GTGAACATGGCGCTCCCTAACAACTGTCCAGAAGCAGATAAATCTTaGTGGCGAAACTGGGGTGGGGTCAAATCAGTAGAGAAGGGAGCC | + |
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Preference number: 5 (lower is better) Translates to: VNMALPNNCPEADKS*WRNWGGVKSVEKGA Trigger: GGCTCCCTTCTCTACTGATTTGACCCCACCCCAGTTTCGCCATCAAGATTTATCTGCTTCTGGACAGTTGTTAGGGAGCGCCATGTTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000679484.1 |
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| CDS CCA 90 bp | CATCCAGTCCCCTCACTTATACAGCTTAGGCAACTGCCTTGTTTCTaGCAAGGCCTGATAGCTTCTGTCCAGTGCAAAGGGTACATGAGT | + |
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Preference number: 5 (lower is better) Translates to: HPVPSLIQLRQLPCF*QGLIASVQCKGYMS Trigger: ACTCATGTACCCTTTGCACTGGACAGAAGCTATCAGGCCTTGCCAGAAACAAGGCAGTTGCCTAAGCTGTATAAGTGAGGGGACTGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000588056.2 ENST00000679484.1 ENST00000681919.1 |
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| CDS CCA 90 bp | CGACTTTCATCCAGGGCTCAGGTTCTAGGCTCCAGTTCCCACTACTaGGAGTGTGATGGGGTTCTCAGTCATTGTAACTTCATTTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: RLSSRAQVLGSSSHY*ECDGVLSHCNFIFL Trigger: GAGGAAAATGAAGTTACAATGACTGAGAACCCCATCACACTCCCAGTAGTGGGAACTGGAGCCTAGAACCTGAGCCCTGGATGAAAGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000679484.1 |
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| CDS TCA 90 bp | CCAGAAGTCCTTTTATGGAGCATAGCTACCTGCTTTTATCTACATTaGGAGGCAGTACGGTGCAGTGGTTACAAGAAAGCACTCTACACC | + |
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Preference number: 5 (lower is better) Translates to: PEVLLWSIATCFYLH*EAVRCSGYKKALYT Trigger: GGTGTAGAGTGCTTTCTTGTAACCACTGCACCGTACTGCCTCTCAATGTAGATAAAAGCAGGTAGCTATGCTCCATAAAAGGACTTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000679484.1 ENST00000680617.1 ENST00000681114.1 ENST00000681919.1 |
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| CDS GCA 72 bp | CATAGAGCCTGTCCCTACCCAGCGAGTTGTGGGCCCTaGCAGGGAATAGGAAACGACCTGGGAGAATCCGCT | + |
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Preference number: 6 (lower is better) Translates to: HRACPYPASCGP*QGIGNDLGESA Trigger: AGCGGATTCTCCCAGGTCGTTTCCTATTCCCTGGCAGGGCCCACAACTCGCTGGGTAGGGACAGGCTCTATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000589613.1 ENST00000680617.1 ENST00000681114.1 ENST00000681919.1 |
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| CDS CCA 72 bp | GCCCTACAGGGGGAAGGGCAGAGACATCTTAGACTCTaGGCTTCCAAATTGAGACCTGGCCACACTCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: ALQGEGQRHLRL*ASKLRPGHTPS Trigger: CGAGGGAGTGTGGCCAGGTCTCAATTTGGAAGCCCAGAGTCTAAGATGTCTCTGCCCTTCCCCCTGTAGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000679484.1 |
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| CDS CAA 90 bp | CTACAGGGGGAAGGGCAGAGACATCTTAGACTCTGGGCTTCCAAATaGAGACCTGGCCACACTCCCTCGACTTTCATCCAGGGCTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: LQGEGQRHLRLWASK*RPGHTPSTFIQGSG Trigger: ACCTGAGCCCTGGATGAAAGTCGAGGGAGTGTGGCCAGGTCTCAATTTGGAAGCCCAGAGTCTAAGATGTCTCTGCCCTTCCCCCTGTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000679484.1 |
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| CDS TCA 72 bp | AAGGGCAGAGACATCTTAGACTCTGGGCTTCCAAATTaGGACCTGGCCACACTCCCTCGACTTTCATCCAGG | + |
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Preference number: 6 (lower is better) Translates to: KGRDILDSGLPN*DLATLPRLSSR Trigger: CCTGGATGAAAGTCGAGGGAGTGTGGCCAGGTCTCAATTTGGAAGCCCAGAGTCTAAGATGTCTCTGCCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000679484.1 |
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| CDS CCA 72 bp | TCCAGGGCTCAGGTTCTAGGCTCCAGTTCCCACTACTaGGAGTGTGATGGGGTTCTCAGTCATTGTAACTTC | + |
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Preference number: 6 (lower is better) Translates to: SRAQVLGSSSHY*ECDGVLSHCNF Trigger: GAAGTTACAATGACTGAGAACCCCATCACACTCCCAGTAGTGGGAACTGGAGCCTAGAACCTGAGCCCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000679484.1 |
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| CDS CAA 72 bp | GAAGGGCAGAGACATCTTAGACTCTGGGCTTCCAAATaGAGACCTGGCCACACTCCCTCGACTTTCATCCAG | + |
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Preference number: 6 (lower is better) Translates to: EGQRHLRLWASK*RPGHTPSTFIQ Trigger: CTGGATGAAAGTCGAGGGAGTGTGGCCAGGTCTCAATTTGGAAGCCCAGAGTCTAAGATGTCTCTGCCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000679484.1 |
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| CDS CCA 72 bp | CCCTCACTTATACAGCTTAGGCAACTGCCTTGTTTCTaGCAAGGCCTGATAGCTTCTGTCCAGTGCAAAGGG | + |
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Preference number: 6 (lower is better) Translates to: PSLIQLRQLPCF*QGLIASVQCKG Trigger: CCCTTTGCACTGGACAGAAGCTATCAGGCCTTGCCAGAAACAAGGCAGTTGCCTAAGCTGTATAAGTGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000588056.2 ENST00000679484.1 ENST00000681919.1 |
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| CDS TCA 72 bp | GCGCTCCCTAACAACTGTCCAGAAGCAGATAAATCTTaGTGGCGAAACTGGGGTGGGGTCAAATCAGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: ALPNNCPEADKS*WRNWGGVKSVE Trigger: CTCTACTGATTTGACCCCACCCCAGTTTCGCCATCAAGATTTATCTGCTTCTGGACAGTTGTTAGGGAGCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000679484.1 |
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| CDS CAA 90 bp | CCCAGAAGTCCTTTTATGGAGCATAGCTACCTGCTTTTATCTACATaGAGAGGCAGTACGGTGCAGTGGTTACAAGAAAGCACTCTACAC | + |
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Preference number: 6 (lower is better) Translates to: PRSPFMEHSYLLLST*RGSTVQWLQESTLH Trigger: GTGTAGAGTGCTTTCTTGTAACCACTGCACCGTACTGCCTCTCAATGTAGATAAAAGCAGGTAGCTATGCTCCATAAAAGGACTTCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000679484.1 ENST00000680617.1 ENST00000681114.1 ENST00000681919.1 |
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| CDS CCA 72 bp | ACTAGTTATGAAATGTCCTTTGGTTTCATGGCTTTCTaGATCCTGGAAAGGCAGATAAGGGACTGTGGACCT | + |
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Preference number: 6 (lower is better) Translates to: TSYEMSFGFMAF*ILERQIRDCGP Trigger: AGGTCCACAGTCCCTTATCTGCCTTTCCAGGATCCAGAAAGCCATGAAACCAAAGGACATTTCATAACTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000589613.1 ENST00000680617.1 ENST00000681114.1 ENST00000681919.1 |
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| CDS TCA 72 bp | CTTTTATGGAGCATAGCTACCTGCTTTTATCTACATTaGGAGGCAGTACGGTGCAGTGGTTACAAGAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: LLWSIATCFYLH*EAVRCSGYKKA Trigger: TGCTTTCTTGTAACCACTGCACCGTACTGCCTCTCAATGTAGATAAAAGCAGGTAGCTATGCTCCATAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000679484.1 ENST00000680617.1 ENST00000681114.1 ENST00000681919.1 |
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| CDS CAA 72 bp | ATTTCTGTAATAAAAGGCATCACTAATGACAGTAAGTaGGATAGAAACTATAGGGCCGGGCATGGCGGTTCA | + |
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Preference number: 6 (lower is better) Translates to: ISVIKGITNDSK*DRNYRAGHGGS Trigger: TGAACCGCCATGCCCGGCCCTATAGTTTCTATCCAACTTACTGTCATTAGTGATGCCTTTTATTACAGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000680617.1 ENST00000681114.1 ENST00000681919.1 |
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