Pregenerated sensors for TUBE1 (Homo sapiens)
Ensembl gene IDs: ENSG00000074935Ensembl transcript IDs: ENST00000368657.7, ENST00000368662.10, ENST00000603621.1, ENST00000603722.1, ENST00000604689.1, ENST00000604743.5, ENST00000604814.5, ENST00000604967.1, ENST00000605457.5
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AAAGCCCCAGAACTTGAAGTAACCAGACTCTTTGGCTTCACAGTTGTACCCAACGCATCTGAAAACATCTaGTCCAATCTTCTAGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: KAPELEVTRLFGFTVVPNASENI*SNLLGG Trigger: TCCTCCTAGAAGATTGGATCAGATGTTTTCAGATGC...GTTGGGTACAACTGTGAAGCCAAAGAGTCTGGTTACTTCAAGTTCTGGGGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605457.5 |
||
| 3UTR-3UTR GCA 90 bp | AAAGCCCCAGAACTTGAAGTAACCAGACTCTTTGGCTTCACAGTTGTACCCAACCCTTTAAAAGAAATGTaGCAAGTCCAGATCCTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: KAPELEVTRLFGFTVVPNPLKEM*QVQILF Trigger: GAACAGGATCTGGACTTGGCACATTTCTTTTAAAGG...GTTGGGTACAACTGTGAAGCCAAAGAGTCTGGTTACTTCAAGTTCTGGGGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000604743.5 |
||
| 3UTR CCA 72 bp | TCAATCAAGACAGCCATTAAAGTAACTAACTTCCTTTaGTCTGATTCCATGGTCACCAAGCAACCTTCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: SIKTAIKVTNFL*SDSMVTKQPSD Trigger: ATCTGAAGGTTGCTTGGTGACCATGGAATCAGACCAAAGGAAGTTAGTTACTTTAATGGCTGTCTTGATTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604967.1 |
||
| CDS-3UTR CCA 90 bp | AAAGCCCCAGAACTTGAAGTAACCAGACTCTTTGGCTTCACAGTTGTACCCAACCCGACTGGGTCATGGTaGTGCGCCGCCGGCTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KAPELEVTRLFGFTVVPNPTGSW*CAAGSG Trigger: CCCGGAGCCGGCGGCGCACCACCATGACCCAGTCGG...GTTGGGTACAACTGTGAAGCCAAAGAGTCTGGTTACTTCAAGTTCTGGGGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000604743.5 ENST00000605457.5 |
||
| CDS-3UTR GCA 90 bp | AAAGCCCCAGAACTTGAAGTAACCAGACTCTTTGGCTTCACAGTTGTACCCAACACTGGGTCATGGTGGTaGGCCGCCGGCTCCGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KAPELEVTRLFGFTVVPNTGSWW*AAGSGS Trigger: GCTCCCGGAGCCGGCGGCGCACCACCATGACCCAGT...GTTGGGTACAACTGTGAAGCCAAAGAGTCTGGTTACTTCAAGTTCTGGGGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000604743.5 ENST00000605457.5 |
||
| CDS-3UTR GCA 90 bp | AAAGCCCCAGAACTTGAAGTAACCAGACTCTTTGGCTTCACAGTTGTACCCAACGCCCGCGGCCGCTTCTaGATTCCCCCAGCAACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KAPELEVTRLFGFTVVPNARGRF*IPPATA Trigger: CGCCGTTGCTGGGGGAATGCAGAAGCGGCCGCGGGC...GTTGGGTACAACTGTGAAGCCAAAGAGTCTGGTTACTTCAAGTTCTGGGGCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000605457.5 |
||
| CDS-3UTR CCA 90 bp | AAAGCCCCAGAACTTGAAGTAACCAGACTCTTTGGCTTCACAGTTGTACCCAACCCACCGACTGGGTCATaGTGGTGCGCCGCCGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KAPELEVTRLFGFTVVPNPPTGS*WCAAGS Trigger: GGAGCCGGCGGCGCACCACCATGACCCAGTCGGTGG...GTTGGGTACAACTGTGAAGCCAAAGAGTCTGGTTACTTCAAGTTCTGGGGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000604743.5 ENST00000605457.5 |
||
| CDS-3UTR CCA 90 bp | AAAGCCCCAGAACTTGAAGTAACCAGACTCTTTGGCTTCACAGTTGTACCCAACTGTACGACCACCGACTaGGTCATGGTGGTGCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: KAPELEVTRLFGFTVVPNCTTTD*VMVVRR Trigger: GCGGCGCACCACCATGACCCAGTCGGTGGTCGTACA...GTTGGGTACAACTGTGAAGCCAAAGAGTCTGGTTACTTCAAGTTCTGGGGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000604743.5 ENST00000605457.5 |
||
| CDS-3UTR CCA 90 bp | AAAGCCCCAGAACTTGAAGTAACCAGACTCTTTGGCTTCACAGTTGTACCCAACATCTGGTTTCCGCACTaGCCGACCTGTACGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: KAPELEVTRLFGFTVVPNIWFPH*PTCTTT Trigger: GGTGGTCGTACAGGTCGGCCAGTGCGGAAACCAGAT...GTTGGGTACAACTGTGAAGCCAAAGAGTCTGGTTACTTCAAGTTCTGGGGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000604743.5 ENST00000605457.5 |
||
| CDS-3UTR TCA 90 bp | AAAGCCCCAGAACTTGAAGTAACCAGACTCTTTGGCTTCACAGTTGTACCCAACAAATTCCTTTCTGGTTaGCCGCGGCGTGCTCCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: KAPELEVTRLFGFTVVPNKFLSG*PRRAPL Trigger: TAAGGGAGCACGCCGCGGTCAACCAGAAAGGAATTT...GTTGGGTACAACTGTGAAGCCAAAGAGTCTGGTTACTTCAAGTTCTGGGGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000604743.5 ENST00000605457.5 |
||
| CDS-3UTR CCA 90 bp | AAAGCCCCAGAACTTGAAGTAACCAGACTCTTTGGCTTCACAGTTGTACCCAACGTACGGAACACAGGCTaGTCTTCCAGCCTTCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KAPELEVTRLFGFTVVPNVRNTG*SSSLLD Trigger: ATCAAGAAGGCTGGAAGACCAGCCTGTGTTCCGTAC...GTTGGGTACAACTGTGAAGCCAAAGAGTCTGGTTACTTCAAGTTCTGGGGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605457.5 |
||
| CDS-3UTR CCA 90 bp | AAAGCCCCAGAACTTGAAGTAACCAGACTCTTTGGCTTCACAGTTGTACCCAACAGTAACCAGACTCTTTaGCTTCACAGTTGTACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KAPELEVTRLFGFTVVPNSNQTL*LHSCTQ Trigger: TTGGGTACAACTGTGAAGCCAAAGAGTCTGGTTACT...GTTGGGTACAACTGTGAAGCCAAAGAGTCTGGTTACTTCAAGTTCTGGGGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000604743.5 ENST00000605457.5 |
||
| CDS-3UTR CCA 90 bp | AAAGCCCCAGAACTTGAAGTAACCAGACTCTTTGGCTTCACAGTTGTACCCAACTTTGTGGCGTCCAGTTaGTCATATTCCTGTATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KAPELEVTRLFGFTVVPNFVASS*SYSCMS Trigger: ACTCATACAGGAATATGACCAACTGGACGCCACAAA...GTTGGGTACAACTGTGAAGCCAAAGAGTCTGGTTACTTCAAGTTCTGGGGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605457.5 |
||
| CDS-3UTR TCA 90 bp | AAAGCCCCAGAACTTGAAGTAACCAGACTCTTTGGCTTCACAGTTGTACCCAACGGTCATATTCCTGTATaGGTGCTGATAAAGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: KAPELEVTRLFGFTVVPNGHIPV*VLIKMT Trigger: TGTCATCTTTATCAGCACTCATACAGGAATATGACC...GTTGGGTACAACTGTGAAGCCAAAGAGTCTGGTTACTTCAAGTTCTGGGGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605457.5 |
||
| CDS-3UTR GCA 90 bp | AAAGCCCCAGAACTTGAAGTAACCAGACTCTTTGGCTTCACAGTTGTACCCAACCATATCAATCAAGACTaGCTGGTGTCCACATTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: KAPELEVTRLFGFTVVPNHINQD*LVSTFL Trigger: TAGAAATGTGGACACCAGGCAGTCTTGATTGATATG...GTTGGGTACAACTGTGAAGCCAAAGAGTCTGGTTACTTCAAGTTCTGGGGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604743.5 |
||
| CDS GCA 90 bp | TTCCGCACTGGCCGACCTGTACGACCACCGACTGGGTCATGGTGGTaGGCCGCCGGCTCCGGGAGCTTGCTAGCCCGCGGCCGCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FRTGRPVRPPTGSWW*AAGSGSLLARGRFC Trigger: GCAGAAGCGGCCGCGGGCTAGCAAGCTCCCGGAGCCGGCGGCGCACCACCATGACCCAGTCGGTGGTCGTACAGGTCGGCCAGTGCGGAA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000603621.1 ENST00000603722.1 ENST00000604743.5 ENST00000605457.5 |
||
| CDS CCA 90 bp | TCTGGTTTCCGCACTGGCCGACCTGTACGACCACCGACTGGGTCATaGTGGTGCGCCGCCGGCTCCGGGAGCTTGCTAGCCCGCGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SGFRTGRPVRPPTGS*WCAAGSGSLLARGR Trigger: GCGGCCGCGGGCTAGCAAGCTCCCGGAGCCGGCGGCGCACCACCATGACCCAGTCGGTGGTCGTACAGGTCGGCCAGTGCGGAAACCAGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000368657.7 ENST00000368662.10 ENST00000603621.1 ENST00000603722.1 ENST00000604743.5 ENST00000605457.5 |
||
| CDS CCA 90 bp | GGTTTCCGCACTGGCCGACCTGTACGACCACCGACTGGGTCATGGTaGTGCGCCGCCGGCTCCGGGAGCTTGCTAGCCCGCGGCCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GFRTGRPVRPPTGSW*CAAGSGSLLARGRF Trigger: GAAGCGGCCGCGGGCTAGCAAGCTCCCGGAGCCGGCGGCGCACCACCATGACCCAGTCGGTGGTCGTACAGGTCGGCCAGTGCGGAAACC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000368662.10 ENST00000603621.1 ENST00000603722.1 ENST00000604743.5 ENST00000605457.5 |
||
| CDS-3UTR CAA 90 bp | AAAGCCCCAGAACTTGAAGTAACCAGACTCTTTGGCTTCACAGTTGTACCCAACGCCGGCTCCGGGAGCTaGCTAGCCCGCGGCCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KAPELEVTRLFGFTVVPNAGSGS*LARGRF Trigger: GAAGCGGCCGCGGGCTAGCAAGCTCCCGGAGCCGGC...GTTGGGTACAACTGTGAAGCCAAAGAGTCTGGTTACTTCAAGTTCTGGGGCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000604743.5 ENST00000605457.5 |
||
| CDS-3UTR CAA 90 bp | AAAGCCCCAGAACTTGAAGTAACCAGACTCTTTGGCTTCACAGTTGTACCCAACGCACAGGCATGTTTTTaGTGGCGTCCAGTTGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: KAPELEVTRLFGFTVVPNAQACF*WRPVGH Trigger: ATGACCAACTGGACGCCACAAAAAACATGCCTGTGC...GTTGGGTACAACTGTGAAGCCAAAGAGTCTGGTTACTTCAAGTTCTGGGGCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000605457.5 |
||
| CDS TCA 90 bp | TACGTTCTTTACTGGGAAGATCCCATGCATCTTAAACGGGTCAGATaGAAGCTCAAGTCGATTATTTCCTGCGTATGGGCTGGAAGACCT | + |
|
Preference number: 5 (lower is better) Translates to: YVLYWEDPMHLKRVR*KLKSIISCVWAGRP Trigger: AGGTCTTCCAGCCCATACGCAGGAAATAATCGACTTGAGCTTTCATCTGACCCGTTTAAGATGCATGGGATCTTCCCAGTAAAGAACGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603722.1 |
||
| CDS TCA 90 bp | CAAATCTCACTGTTCTGCACACGAACACCAATAAAGAGGAGACCCTaGGAATCAGGAAAAACGTTAAGACTAAGGTCGCTGGCCAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: QISLFCTRTPIKRRP*ESGKTLRLRSLASV Trigger: AACACTGGCCAGCGACCTTAGTCTTAACGTTTTTCCTGATTCTCAGGGTCTCCTCTTTATTGGTGTTCGTGTGCAGAACAGTGAGATTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000603722.1 |
||
| CDS-3UTR CAA 90 bp | AAAGCCCCAGAACTTGAAGTAACCAGACTCTTTGGCTTCACAGTTGTACCCAACTTTTGTGGCGTCCAGTaGGTCATATTCCTGTATGAG | + |
|
Preference number: 5 (lower is better) Translates to: KAPELEVTRLFGFTVVPNFCGVQ*VIFLYE Trigger: CTCATACAGGAATATGACCAACTGGACGCCACAAAA...GTTGGGTACAACTGTGAAGCCAAAGAGTCTGGTTACTTCAAGTTCTGGGGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605457.5 |
||
| CDS-3UTR CAA 90 bp | AAAGCCCCAGAACTTGAAGTAACCAGACTCTTTGGCTTCACAGTTGTACCCAACGAACATATTTTTCCCTaGGAAATACTTCCACCATCA | + |
|
Preference number: 5 (lower is better) Translates to: KAPELEVTRLFGFTVVPNEHIFP*EILPPS Trigger: TGATGGTGGAAGTATTTCCAAGGGAAAAATATGTTC...GTTGGGTACAACTGTGAAGCCAAAGAGTCTGGTTACTTCAAGTTCTGGGGCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000605457.5 |
||
| CDS-3UTR CAA 90 bp | AAAGCCCCAGAACTTGAAGTAACCAGACTCTTTGGCTTCACAGTTGTACCCAACCCACAATGTTATTCATaGCATCAAAGGGCTTCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: KAPELEVTRLFGFTVVPNPQCYS*HQRASY Trigger: ATAAGAAGCCCTTTGATGCAATGAATAACATTGTGG...GTTGGGTACAACTGTGAAGCCAAAGAGTCTGGTTACTTCAAGTTCTGGGGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000604743.5 ENST00000605457.5 |
||
| CDS TCA 90 bp | AAGACTAAGGTCGCTGGCCAGTGTTCTTTTAGTTTAGTGTGTGTCTaGCGCAACATGTTTAAAAACCAGTACGTTCTTTACTGGGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: KTKVAGQCSFSLVCV*RNMFKNQYVLYWED Trigger: ATCTTCCCAGTAAAGAACGTACTGGTTTTTAAACATGTTGCGTCAGACACACACTAAACTAAAAGAACACTGGCCAGCGACCTTAGTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000603722.1 |
||
| CDS GCA 90 bp | GCAACATGTTTAAAAACCAGTACGTTCTTTACTGGGAAGATCCCATaGATCTTAAACGGGTCAGATGAAAGCTCAAGTCGATTATTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ATCLKTSTFFTGKIP*ILNGSDESSSRLFP Trigger: AGGAAATAATCGACTTGAGCTTTCATCTGACCCGTTTAAGATGCATGGGATCTTCCCAGTAAAGAACGTACTGGTTTTTAAACATGTTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000603722.1 |
||
| CDS GCA 72 bp | GGCCGACCTGTACGACCACCGACTGGGTCATGGTGGTaGGCCGCCGGCTCCGGGAGCTTGCTAGCCCGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: GRPVRPPTGSWW*AAGSGSLLARG Trigger: GCCGCGGGCTAGCAAGCTCCCGGAGCCGGCGGCGCACCACCATGACCCAGTCGGTGGTCGTACAGGTCGGCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000368657.7 ENST00000368662.10 ENST00000603621.1 ENST00000603722.1 ENST00000604743.5 ENST00000605457.5 |
||
| CDS CAA 90 bp | CGACCACCGACTGGGTCATGGTGGTGCGCCGCCGGCTCCGGGAGCTaGCTAGCCCGCGGCCGCTTCTGCATTCCCCCAGCAACGGCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RPPTGSWWCAAGSGS*LARGRFCIPPATAL Trigger: GAGCGCCGTTGCTGGGGGAATGCAGAAGCGGCCGCGGGCTAGCAAGCTCCCGGAGCCGGCGGCGCACCACCATGACCCAGTCGGTGGTCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000603722.1 ENST00000605457.5 |
||
| CDS CCA 72 bp | ACTGGCCGACCTGTACGACCACCGACTGGGTCATGGTaGTGCGCCGCCGGCTCCGGGAGCTTGCTAGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: TGRPVRPPTGSW*CAAGSGSLLAR Trigger: GCGGGCTAGCAAGCTCCCGGAGCCGGCGGCGCACCACCATGACCCAGTCGGTGGTCGTACAGGTCGGCCAGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000368657.7 ENST00000368662.10 ENST00000603621.1 ENST00000603722.1 ENST00000604743.5 ENST00000605457.5 |
||
| CDS CCA 72 bp | CGCACTGGCCGACCTGTACGACCACCGACTGGGTCATaGTGGTGCGCCGCCGGCTCCGGGAGCTTGCTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RTGRPVRPPTGS*WCAAGSGSLLA Trigger: GGCTAGCAAGCTCCCGGAGCCGGCGGCGCACCACCATGACCCAGTCGGTGGTCGTACAGGTCGGCCAGTGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000368657.7 ENST00000368662.10 ENST00000603621.1 ENST00000603722.1 ENST00000604743.5 ENST00000605457.5 |
||
| CDS CAA 72 bp | ACTGGGTCATGGTGGTGCGCCGCCGGCTCCGGGAGCTaGCTAGCCCGCGGCCGCTTCTGCATTCCCCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: TGSWWCAAGSGS*LARGRFCIPPA Trigger: TGCTGGGGGAATGCAGAAGCGGCCGCGGGCTAGCAAGCTCCCGGAGCCGGCGGCGCACCACCATGACCCAGT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000603621.1 ENST00000603722.1 ENST00000604743.5 ENST00000605457.5 |
||
| CDS CCA 72 bp | TGGTTTCCGCACTGGCCGACCTGTACGACCACCGACTaGGTCATGGTGGTGCGCCGCCGGCTCCGGGAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: WFPHWPTCTTTD*VMVVRRRLREL Trigger: AAGCTCCCGGAGCCGGCGGCGCACCACCATGACCCAGTCGGTGGTCGTACAGGTCGGCCAGTGCGGAAACCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000368657.7 ENST00000368662.10 ENST00000603621.1 ENST00000603722.1 ENST00000604743.5 ENST00000604967.1 ENST00000605457.5 |
||
| CDS TCA 72 bp | CTGTTCTGCACACGAACACCAATAAAGAGGAGACCCTaGGAATCAGGAAAAACGTTAAGACTAAGGTCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LFCTRTPIKRRP*ESGKTLRLRSL Trigger: CAGCGACCTTAGTCTTAACGTTTTTCCTGATTCTCAGGGTCTCCTCTTTATTGGTGTTCGTGTGCAGAACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000603722.1 |
||
| CDS TCA 72 bp | GTCGCTGGCCAGTGTTCTTTTAGTTTAGTGTGTGTCTaGCGCAACATGTTTAAAAACCAGTACGTTCTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: VAGQCSFSLVCV*RNMFKNQYVLY Trigger: GTAAAGAACGTACTGGTTTTTAAACATGTTGCGTCAGACACACACTAAACTAAAAGAACACTGGCCAGCGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000603722.1 |
||
| CDS CCA 72 bp | GCTGAGTCTCAACTATGTAATACTCAATGTAAGCGTTaGGTAACAAGAAGTAAAGAGGTGGGTGTAGGAACT | + |
|
Preference number: 6 (lower is better) Translates to: AESQLCNTQCKR*VTRSKEVGVGT Trigger: AGTTCCTACACCCACCTCTTTACTTCTTGTTACCCAACGCTTACATTGAGTATTACATAGTTGAGACTCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604814.5 |
||
| CDS GCA 72 bp | AAACTCATACACATTGTTGCCAGTAAGAAGCACTGGTaGAATATTGTAGGAAGGTATATAGGTAATATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KLIHIVASKKHW*NIVGRYIGNIS Trigger: GCTGATATTACCTATATACCTTCCTACAATATTGCACCAGTGCTTCTTACTGGCAACAATGTGTATGAGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604689.1 |
||
| CDS TCA 72 bp | AATTCCCACTTATCCTTTAACACTGTTACAGGCAAATaGGTGAAAAATTTTACCTCCTCCCATGGAATGTAT | + |
|
Preference number: 6 (lower is better) Translates to: NSHLSFNTVTGK*VKNFTSSHGMY Trigger: ATACATTCCATGGGAGGAGGTAAAATTTTTCACTCATTTGCCTGTAACAGTGTTAAAGGATAAGTGGGAATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368657.7 |
||