Pregenerated sensors for TUBB8 (Homo sapiens)

Ensembl gene IDs: ENSG00000261456

Ensembl transcript IDs: ENST00000564130.2, ENST00000567466.1

Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	GTCAGGCACAAAGCTCACAGGGCTGAGTCACCTGTTTTAGTGTCTTaGAAAGATTTACCCTTTTGCCTCGGTGTCCCGGAGCTGCAGCAG	+
Preference number: 5 (lower is better) Translates to: VRHKAHRAESPVLVS*KDLPFCLGVPELQQ Trigger: CTGCTGCAGCTCCGGGACACCGAGGCAAAAGGGTAAATCTTTTCAAGACACTAAAACAGGTGACTCAGCCCTGTGAGCTTTGTGCCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564130.2
CDS TCA 90 bp	ATTTTGGACAGGTTTAACTGGAGAAGGAGAAAATTGCTGGCCATTTaGGTCATGTCAGGCACAAAGCTCACAGGGCTGAGTCACCTGTTT	+
Preference number: 5 (lower is better) Translates to: ILDRFNWRRRKLLAI*VMSGTKLTGLSHLF Trigger: AAACAGGTGACTCAGCCCTGTGAGCTTTGTGCCTGACATGACTCAAATGGCCAGCAATTTTCTCCTTCTCCAGTTAAACCTGTCCAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564130.2
CDS TCA 90 bp	ATTGGATTCTTAAAGCTGAGGACAGGTTTTGGGATACGCCTGCTGTaGAAGATGGGCCATTGTCACTTTGCAGGCTTTTGGATTACCCAA	+
Preference number: 5 (lower is better) Translates to: IGFLKLRTGFGIRLL*KMGHCHFAGFWITQ Trigger: TTGGGTAATCCAAAAGCCTGCAAAGTGACAATGGCCCATCTTTCACAGCAGGCGTATCCCAAAACCTGTCCTCAGCTTTAAGAATCCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564130.2
CDS GCA 90 bp	CTGAATTTTCCTCCCATGTGGGAGGGGAAGACTCTTGTTTCCATATaGACGGAGTGCCTTTGCACCTGTCCTAGATTGATGACATATTTT	+
Preference number: 5 (lower is better) Translates to: LNFPPMWEGKTLVSI*TECLCTCPRLMTYF Trigger: AAAATATGTCATCAATCTAGGACAGGTGCAAAGGCACTCCGTGCATATGGAAACAAGAGTCTTCCCCTCCCACATGGGAGGAAAATTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564130.2
CDS CCA 90 bp	CAAATATTTGAATCTCCTGCAGAAAGGCTTCCGGGTAAATTAGAGTaGCCAGTTCTCACCTGGATAGGTTCCTCAATTTTGGACAGGTTT	+
Preference number: 5 (lower is better) Translates to: QIFESPAERLPGKLE*PVLTWIGSSILDRF Trigger: AAACCTGTCCAAAATTGAGGAACCTATCCAGGTGAGAACTGGCCACTCTAATTTACCCGGAAGCCTTTCTGCAGGAGATTCAAATATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564130.2
CDS TCA 72 bp	AGAGATCACCTCCCAGAACTGTGGATCCCCTGGCGCTaGACATCTGTTGGAAAGCTCAGGTGTCCTTGCGTG	+
Preference number: 6 (lower is better) Translates to: RDHLPELWIPWR*TSVGKLRCPCV Trigger: CACGCAAGGACACCTGAGCTTTCCAACAGATGTTCAGCGCCAGGGGATCCACAGTTCTGGGAGGTGATCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564130.2 ENST00000567466.1
CDS CAA 72 bp	TCCCAGAACTGTGGATCCCCTGGCGCTGAACATCTGTaGGAAAGCTCAGGTGTCCTTGCGTGGTCCTTTCCA	+
Preference number: 6 (lower is better) Translates to: SQNCGSPGAEHL*ESSGVLAWSFP Trigger: TGGAAAGGACCACGCAAGGACACCTGAGCTTTCCAACAGATGTTCAGCGCCAGGGGATCCACAGTTCTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564130.2 ENST00000567466.1
CDS GCA 72 bp	CCTCCCATGTGGGAGGGGAAGACTCTTGTTTCCATATaGACGGAGTGCCTTTGCACCTGTCCTAGATTGATG	+
Preference number: 6 (lower is better) Translates to: PPMWEGKTLVSI*TECLCTCPRLM Trigger: CATCAATCTAGGACAGGTGCAAAGGCACTCCGTGCATATGGAAACAAGAGTCTTCCCCTCCCACATGGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564130.2
CDS CCA 72 bp	TCCCTAGCTGAGCTGAAACTGAATTTTCCTCCCATGTaGGAGGGGAAGACTCTTGTTTCCATATGCACGGAG	+
Preference number: 6 (lower is better) Translates to: SLAELKLNFPPM*EGKTLVSICTE Trigger: CTCCGTGCATATGGAAACAAGAGTCTTCCCCTCCCACATGGGAGGAAAATTCAGTTTCAGCTCAGCTAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564130.2
CDS TCA 72 bp	AAAGCTCACAGGGCTGAGTCACCTGTTTTAGTGTCTTaGAAAGATTTACCCTTTTGCCTCGGTGTCCCGGAG	+
Preference number: 6 (lower is better) Translates to: KAHRAESPVLVS*KDLPFCLGVPE Trigger: CTCCGGGACACCGAGGCAAAAGGGTAAATCTTTTCAAGACACTAAAACAGGTGACTCAGCCCTGTGAGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564130.2
CDS TCA 72 bp	TTTCACCTTTCCAGAGGACTGTGGTCTCCAGCAGAGTaGAGGTCATATTGGATTCTTAAAGCTGAGGACAGG	+
Preference number: 6 (lower is better) Translates to: FHLSRGLWSPAE*RSYWILKAEDR Trigger: CCTGTCCTCAGCTTTAAGAATCCAATATGACCTTCACTCTGCTGGAGACCACAGTCCTCTGGAAAGGTGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564130.2
CDS CCA 72 bp	GAATCTCCTGCAGAAAGGCTTCCGGGTAAATTAGAGTaGCCAGTTCTCACCTGGATAGGTTCCTCAATTTTG	+
Preference number: 6 (lower is better) Translates to: ESPAERLPGKLE*PVLTWIGSSIL Trigger: CAAAATTGAGGAACCTATCCAGGTGAGAACTGGCCACTCTAATTTACCCGGAAGCCTTTCTGCAGGAGATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564130.2
CDS CAA 72 bp	GGATACGCCTGCTGTGAAAGATGGGCCATTGTCACTTaGCAGGCTTTTGGATTACCCAAACTGAGGAGTTAT	+
Preference number: 6 (lower is better) Translates to: GYACCERWAIVT*QAFGLPKLRSY Trigger: ATAACTCCTCAGTTTGGGTAATCCAAAAGCCTGCAAAGTGACAATGGCCCATCTTTCACAGCAGGCGTATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564130.2
CDS GCA 72 bp	TGGGAGGGGAAGACTCTTGTTTCCATATGCACGGAGTaGCTTTGCACCTGTCCTAGATTGATGACATATTTT	+
Preference number: 6 (lower is better) Translates to: WEGKTLVSICTE*LCTCPRLMTYF Trigger: AAAATATGTCATCAATCTAGGACAGGTGCAAAGGCACTCCGTGCATATGGAAACAAGAGTCTTCCCCTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564130.2
CDS CCA 72 bp	AGGTCATATTGGATTCTTAAAGCTGAGGACAGGTTTTaGGATACGCCTGCTGTGAAAGATGGGCCATTGTCA	+
Preference number: 6 (lower is better) Translates to: RSYWILKAEDRF*DTPAVKDGPLS Trigger: TGACAATGGCCCATCTTTCACAGCAGGCGTATCCCAAAACCTGTCCTCAGCTTTAAGAATCCAATATGACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564130.2
CDS CAA 72 bp	GAGTGGCCAGTTCTCACCTGGATAGGTTCCTCAATTTaGGACAGGTTTAACTGGAGAAGGAGAAAATTGCTG	+
Preference number: 6 (lower is better) Translates to: EWPVLTWIGSSI*DRFNWRRRKLL Trigger: CAGCAATTTTCTCCTTCTCCAGTTAAACCTGTCCAAAATTGAGGAACCTATCCAGGTGAGAACTGGCCACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564130.2
CDS TCA 72 bp	CCATTTGAGTCATGTCAGGCACAAAGCTCACAGGGCTaGGTCACCTGTTTTAGTGTCTTGAAAAGATTTACC	+
Preference number: 6 (lower is better) Translates to: PFESCQAQSSQG*VTCFSVLKRFT Trigger: GGTAAATCTTTTCAAGACACTAAAACAGGTGACTCAGCCCTGTGAGCTTTGTGCCTGACATGACTCAAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564130.2
CDS GCA 72 bp	GGGAAGACTCTTGTTTCCATATGCACGGAGTGCCTTTaGACCTGTCCTAGATTGATGACATATTTTTGTAAT	+
Preference number: 6 (lower is better) Translates to: GKTLVSICTECL*TCPRLMTYFCN Trigger: ATTACAAAAATATGTCATCAATCTAGGACAGGTGCAAAGGCACTCCGTGCATATGGAAACAAGAGTCTTCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000564130.2
CDS TCA 72 bp	TTAGGAGATCTGTGGTTAGGAAAGGCCTTCCACATGTaGACTCAACAGGACTCAATTATACGTTTTACTTTG	+
Preference number: 6 (lower is better) Translates to: LGDLWLGKAFHM*TQQDSIIRFTL Trigger: CAAAGTAAAACGTATAATTGAGTCCTGTTGAGTTCACATGTGGAAGGCCTTTCCTAACCACAGATCTCCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564130.2