RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TUBB6 (Homo sapiens)

Ensembl gene IDs: ENSG00000176014

Ensembl transcript IDs: ENST00000317702.10, ENST00000417736.2, ENST00000586653.5, ENST00000586810.5, ENST00000587204.1, ENST00000590103.5, ENST00000590388.5, ENST00000590693.5, ENST00000590967.5, ENST00000591208.1, ENST00000591909.5, ENST00000592683.5

Found 222 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCAGAGTGGCCGAGGCTGGACCCTGTGGCACCAAGTGGGGTCGGCTaGCCGTGTGGCAGGGATCGTTGCACTGGACTCTTGGCGTGTGGG +
Preference number: 1 (lower is better)
Translates to: PEWPRLDPVAPSGVG*PCGRDRCTGLLACG
Trigger: CCCACACGCCAAGAGTCCAGTGCAACGATCCCTGCCACACGGTCAGCCGACCCCACTTGGTGCCACAGGGTCCAGCCTCGGCCACTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR CCA 90 bp GCCGAGGCTGGACCCTGTGGCACCAAGTGGGGTCGGCTGACCGTGTaGCAGGGATCGTTGCACTGGACTCTTGGCGTGTGGGAAGGGATG +
Preference number: 1 (lower is better)
Translates to: AEAGPCGTKWGRLTV*QGSLHWTLGVWEGM
Trigger: CATCCCTTCCCACACGCCAAGAGTCCAGTGCAACGATCCCTGCCACACGGTCAGCCGACCCCACTTGGTGCCACAGGGTCCAGCCTCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR TCA 90 bp CACTGTCCCATAGCCTCATTGGGCTCCCAGACGTGCTGGAAAGGTTaGGCCCAGAGTGGCCGAGGCTGGACCCTGTGGCACCAAGTGGGG +
Preference number: 1 (lower is better)
Translates to: HCPIASLGSQTCWKG*AQSGRGWTLWHQVG
Trigger: CCCCACTTGGTGCCACAGGGTCCAGCCTCGGCCACTCTGGGCTCAACCTTTCCAGCACGTCTGGGAGCCCAATGAGGCTATGGGACAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR CCA 90 bp AAGGTTGAGCCCAGAGTGGCCGAGGCTGGACCCTGTGGCACCAAGTaGGGTCGGCTGACCGTGTGGCAGGGATCGTTGCACTGGACTCTT +
Preference number: 1 (lower is better)
Translates to: KVEPRVAEAGPCGTK*GRLTVWQGSLHWTL
Trigger: AAGAGTCCAGTGCAACGATCCCTGCCACACGGTCAGCCGACCCCACTTGGTGCCACAGGGTCCAGCCTCGGCCACTCTGGGCTCAACCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR CCA 90 bp GGCACCAAGTGGGGTCGGCTGACCGTGTGGCAGGGATCGTTGCACTaGACTCTTGGCGTGTGGGAAGGGATGCTTTCTCTTTGTCGCCCA +
Preference number: 1 (lower is better)
Translates to: GTKWGRLTVWQGSLH*TLGVWEGMLSLCRP
Trigger: TGGGCGACAAAGAGAAAGCATCCCTTCCCACACGCCAAGAGTCCAGTGCAACGATCCCTGCCACACGGTCAGCCGACCCCACTTGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR TCA 90 bp GGACTGGAACAAGGAGCGGGAAAAGGAGAAAGAGGAGCCCCCGGGTaGGAAAGTTGCCAACTAGAGGCCCAGAGGGAGGCCATCTCAGTC +
Preference number: 1 (lower is better)
Translates to: GLEQGAGKGERGAPG*ESCQLEAQREAISV
Trigger: GACTGAGATGGCCTCCCTCTGGGCCTCTAGTTGGCAACTTTCTCACCCGGGGGCTCCTCTTTCTCCTTTTCCCGCTCCTTGTTCCAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR TCA 90 bp GCTGCGCCATCACCATGCTTGGTCACCGACAAGGAGGGTGTGAAGTaGTTCCATGATGTGCTGTTAGCCAAAGGGAGGGGCCGGGGAAAC +
Preference number: 1 (lower is better)
Translates to: AAPSPCLVTDKEGVK*FHDVLLAKGRGRGN
Trigger: GTTTCCCCGGCCCCTCCCTTTGGCTAACAGCACATCATGGAATCACTTCACACCCTCCTTGTCGGTGACCAAGCATGGTGATGGCGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
3UTR TCA 90 bp GAGTCCTTAGTCCTTTCAGCCTCAGAGGTCACAGTGGGTGGCAGGTaGCTTTCCGGAGGCCTTGAGGGAAATGCACACTGTCCCATAGCC +
Preference number: 1 (lower is better)
Translates to: ESLVLSASEVTVGGR*LSGGLEGNAHCPIA
Trigger: GGCTATGGGACAGTGTGCATTTCCCTCAAGGCCTCCGGAAAGTCACCTGCCACCCACTGTGACCTCTGAGGCTGAAAGGACTAAGGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR TCA 90 bp ATCACCATGCTTGGTCACCGACAAGGAGGGTGTGAAGTGATTCCATaGTGTGCTGTTAGCCAAAGGGAGGGGCCGGGGAAACAGGCACCC +
Preference number: 1 (lower is better)
Translates to: ITMLGHRQGGCEVIP*CAVSQREGPGKQAP
Trigger: GGGTGCCTGTTTCCCCGGCCCCTCCCTTTGGCTAACAGCACATCATGGAATCACTTCACACCCTCCTTGTCGGTGACCAAGCATGGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
3UTR GCA 90 bp CAGTTGTTCCCTGCACCCGTCTGGCCTGCAACAAAGAGAGTCCCGTaGCGTTTAAACAGGAAAGGGCTGCGCCATCACCATGCTTGGTCA +
Preference number: 1 (lower is better)
Translates to: QLFPAPVWPATKRVP*RLNRKGLRHHHAWS
Trigger: TGACCAAGCATGGTGATGGCGCAGCCCTTTCCTGTTTAAACGGCACGGGACTCTCTTTGTTGCAGGCCAGACGGGTGCAGGGAACAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
3UTR TCA 90 bp TGGGAATGCTGCGCTGATTTTAGCCAGCCACTGGCCCAGCTGAAATaGTGGGGAAAGGAGTCCTTAGTCCTTTCAGCCTCAGAGGTCACA +
Preference number: 1 (lower is better)
Translates to: WECCADFSQPLAQLK*WGKESLVLSASEVT
Trigger: TGTGACCTCTGAGGCTGAAAGGACTAAGGACTCCTTTCCCCATCATTTCAGCTGGGCCAGTGGCTGGCTAAAATCAGCGCAGCATTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR GCA 90 bp CTTGGCTGCATTTGTGAGGGGCCGACACCAACACAATTAAACCAGTaGACCATTCAGGGCCATAGGGTAGGAGGCACCAGGGTTCAAGAA +
Preference number: 1 (lower is better)
Translates to: LGCICEGPTPTQLNQ*TIQGHRVGGTRVQE
Trigger: TTCTTGAACCCTGGTGCCTCCTACCCTATGGCCCTGAATGGTGCACTGGTTTAATTGTGTTGGTGTCGGCCCCTCACAAATGCAGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317702.10
ENST00000591208.1
3UTR CCA 90 bp TCGCCCAGTTGTTCCCTGCACCCGTCTGGCCTATCAACTGAAGACTaGTTAAATCCACGGCGGTATCTCTGCAGAGGATACTATCAGCCA +
Preference number: 1 (lower is better)
Translates to: SPSCSLHPSGLSTED*LNPRRYLCRGYYQP
Trigger: TGGCTGATAGTATCCTCTGCAGAGATACCGCCGTGGATTTAACCAGTCTTCAGTTGATAGGCCAGACGGGTGCAGGGAACAACTGGGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590388.5
3UTR CCA 90 bp TGCCAACTAGAGGCCCAGAGGGAGGCCATCTCAGTCTGTCCACTGTaGTTTCAGCTGGTGCATTATTTCAGCTGTGGCTTTCAGAAGAAT +
Preference number: 1 (lower is better)
Translates to: CQLEAQREAISVCPL*FQLVHYFSCGFQKN
Trigger: ATTCTTCTGAAAGCCACAGCTGAAATAATGCACCAGCTGAAACCACAGTGGACAGACTGAGATGGCCTCCCTCTGGGCCTCTAGTTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR CCA 90 bp GTGGTTTCAGCTGGTGCATTATTTCAGCTGTGGCTTTCAGAAGAATaGGAATGCTGCGCTGATTTTAGCCAGCCACTGGCCCAGCTGAAA +
Preference number: 1 (lower is better)
Translates to: VVSAGALFQLWLSEE*ECCADFSQPLAQLK
Trigger: TTTCAGCTGGGCCAGTGGCTGGCTAAAATCAGCGCAGCATTCCCATTCTTCTGAAAGCCACAGCTGAAATAATGCACCAGCTGAAACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR CCA 90 bp ACCTGGTTGTTCCATGTTAAAGAGGTAATTCTATCAACTGAAGACTaGTTAAATCCACGGCGGTATCTCTGCAGAGGATACTATCAGCCA +
Preference number: 1 (lower is better)
Translates to: TWLFHVKEVILSTED*LNPRRYLCRGYYQP
Trigger: TGGCTGATAGTATCCTCTGCAGAGATACCGCCGTGGATTTAACCAGTCTTCAGTTGATAGAATTACCTCTTTAACATGGAACAACCAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586810.5
3UTR TCA 90 bp TCTCTTTCAAGTCCTCTAGTAGAAAGTCTCCATGGTGTGATCTTCTaGCTGGGTAGAACCCGCAATTCTCTGCTGTTTTTAGTCTTTGTT +
Preference number: 1 (lower is better)
Translates to: SLSSPLVESLHGVIF*LGRTRNSLLFLVFV
Trigger: AACAAAGACTAAAAACAGCAGAGAATTGCGGGTTCTACCCAGTCAGAAGATCACACCATGGAGACTTTCTACTAGAGGACTTGAAAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317702.10
3UTR-3UTR GCA 90 bp AGTGGCCGAGGCTGGACCCTGTGGCACCAAGTGGGGTCGGCTGACCGTGTGGCAGCGTGTGGGAAGGGATaGTTTCTCTTTGTCGCCCAC +
Preference number: 2 (lower is better)
Translates to: SGRGWTLWHQVGSADRVAACGKG*FLFVAH
Trigger: GTGGGCGACAAAGAGAAAGCATCCCTTCCCACACGC...TGCCACACGGTCAGCCGACCCCACTTGGTGCCACAGGGTCCAGCCTCGGCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR-3UTR CCA 90 bp ATTGGGCTCCCAGACGTGCTGGAAAGGTTGAGCCCAGAGTGGCCGAGGCTGGACGGTCGGCTGACCGTGTaGCAGGGATCGTTGCACTGG +
Preference number: 2 (lower is better)
Translates to: IGLPDVLERLSPEWPRLDGRLTV*QGSLHW
Trigger: CCAGTGCAACGATCCCTGCCACACGGTCAGCCGACC...GTCCAGCCTCGGCCACTCTGGGCTCAACCTTTCCAGCACGTCTGGGAGCCCAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR-3UTR GCA 90 bp TTCCATGATGTGCTGTTAGCCAAAGGGAGGGGCCGGGGAAACAGGCACCCACCACGCCCAGTTGTTCCCTaGACCCGTCTGGCCTGCAAC +
Preference number: 2 (lower is better)
Translates to: FHDVLLAKGRGRGNRHPPRPVVP*TRLACN
Trigger: GTTGCAGGCCAGACGGGTGCAGGGAACAACTGGGCG...TGGTGGGTGCCTGTTTCCCCGGCCCCTCCCTTTGGCTAACAGCACATCATGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
3UTR-3UTR CCA 90 bp GAAAGTTGCCAACTAGAGGCCCAGAGGGAGGCCATCTCAGTCTGTCCACTGTGGCCCTGTGGCACCAAGTaGGGTCGGCTGACCGTGTGG +
Preference number: 2 (lower is better)
Translates to: ESCQLEAQREAISVCPLWPCGTK*GRLTVW
Trigger: CCACACGGTCAGCCGACCCCACTTGGTGCCACAGGG...CCACAGTGGACAGACTGAGATGGCCTCCCTCTGGGCCTCTAGTTGGCAACTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR CAA 90 bp CCCTGTGGCACCAAGTGGGGTCGGCTGACCGTGTGGCAGGGATCGTaGCACTGGACTCTTGGCGTGTGGGAAGGGATGCTTTCTCTTTGT +
Preference number: 2 (lower is better)
Translates to: PCGTKWGRLTVWQGS*HWTLGVWEGMLSLC
Trigger: ACAAAGAGAAAGCATCCCTTCCCACACGCCAAGAGTCCAGTGCAACGATCCCTGCCACACGGTCAGCCGACCCCACTTGGTGCCACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR-3UTR CCA 90 bp ATTGGGCTCCCAGACGTGCTGGAAAGGTTGAGCCCAGAGTGGCCGAGGCTGGACCAGGGATCGTTGCACTaGACTCTTGGCGTGTGGGAA +
Preference number: 2 (lower is better)
Translates to: IGLPDVLERLSPEWPRLDQGSLH*TLGVWE
Trigger: TTCCCACACGCCAAGAGTCCAGTGCAACGATCCCTG...GTCCAGCCTCGGCCACTCTGGGCTCAACCTTTCCAGCACGTCTGGGAGCCCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR-3UTR GCA 90 bp CCCTGCACCCGTCTGGCCTGCAACAAAGAGAGTCCCGTGCCGTTTAAACAGGAATGCACCCGTCTGGCCTaGAACAAAGAGAGTCCCGTG +
Preference number: 2 (lower is better)
Translates to: PCTRLACNKESPVPFKQECTRLA*NKESPV
Trigger: CACGGGACTCTCTTTGTTGCAGGCCAGACGGGTGCA...TTCCTGTTTAAACGGCACGGGACTCTCTTTGTTGCAGGCCAGACGGGTGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586653.5
ENST00000586810.5
ENST00000592683.5
3UTR-3UTR CCA 90 bp TGCCAACTAGAGGCCCAGAGGGAGGCCATCTCAGTCTGTCCACTGTGGTTTCAGAGAGGTCACAGTGGGTaGCAGGTGACTTTCCGGAGG +
Preference number: 2 (lower is better)
Translates to: CQLEAQREAISVCPLWFQRGHSG*QVTFRR
Trigger: CCTCCGGAAAGTCACCTGCCACCCACTGTGACCTCT...CTGAAACCACAGTGGACAGACTGAGATGGCCTCCCTCTGGGCCTCTAGTTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR-3UTR TCA 90 bp ATGAAGAATTTGTGGAAGGCACTGGCAGCTTGGATGAGGACACCTCACTTCCAGCCAAGTGGGGTCGGCTaGCCGTGTGGCAGGGATCGT +
Preference number: 2 (lower is better)
Translates to: MKNLWKALAAWMRTPHFQPSGVG*PCGRDR
Trigger: ACGATCCCTGCCACACGGTCAGCCGACCCCACTTGG...CTGGAAGTGAGGTGTCCTCATCCAAGCTGCCAGTGCCTTCCACAAATTCTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR-3UTR CCA 90 bp AGGTCACAGTGGGTGGCAGGTGACTTTCCGGAGGCCTTGAGGGAAATGCACACTGTTGCACTGGACTCTTaGCGTGTGGGAAGGGATGCT +
Preference number: 2 (lower is better)
Translates to: RSQWVAGDFPEALREMHTVALDS*RVGRDA
Trigger: AGCATCCCTTCCCACACGCCAAGAGTCCAGTGCAAC...AGTGTGCATTTCCCTCAAGGCCTCCGGAAAGTCACCTGCCACCCACTGTGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR-3UTR TCA 90 bp CACCAGGGTTCAAGAAGGAACTTGCGTGTTGTAGGATCTGAGTTGGGGCGGCTCGCGTGTTGTAGGATCTaGGTTGGGGCGGCTCTATTC +
Preference number: 2 (lower is better)
Translates to: HQGSRRNLRVVGSELGRLACCRI*VGAALF
Trigger: GAATAGAGCCGCCCCAACTCAGATCCTACAACACGC...GAGCCGCCCCAACTCAGATCCTACAACACGCAAGTTCCTTCTTGAACCCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317702.10
ENST00000591208.1
3UTR-3UTR TCA 90 bp AACCAGTGCACCATTCAGGGCCATAGGGTAGGAGGCACCAGGGTTCAAGAAGGAGCGTGTTGTAGGATCTaGGTTGGGGCGGCTCTATTC +
Preference number: 2 (lower is better)
Translates to: NQCTIQGHRVGGTRVQEGACCRI*VGAALF
Trigger: GAATAGAGCCGCCCCAACTCAGATCCTACAACACGC...TCCTTCTTGAACCCTGGTGCCTCCTACCCTATGGCCCTGAATGGTGCACTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317702.10
ENST00000591208.1
3UTR-3UTR GCA 90 bp CCCGTGCCGTTTAAACAGGAAAGGGCTGCGCCATCACCATGCTTGGTCACCGACGTGCAGCTGAGCAGATaGACTGGTACGTTTTTAGGC +
Preference number: 2 (lower is better)
Translates to: PVPFKQERAAPSPCLVTDVQLSR*TGTFLG
Trigger: GCCTAAAAACGTACCAGTGCATCTGCTCAGCTGCAC...GTCGGTGACCAAGCATGGTGATGGCGCAGCCCTTTCCTGTTTAAACGGCACGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
3UTR-3UTR CCA 90 bp TTGTTCCCTGCACCCGTCTGGCCTGCAACAAAGAGAGTCCCGTGCCGTTTAAACTTCCCTGCACCCGTCTaGCCTGCAACAAAGAGAGTC +
Preference number: 2 (lower is better)
Translates to: LFPAPVWPATKRVPCRLNFPAPV*PATKRV
Trigger: GACTCTCTTTGTTGCAGGCCAGACGGGTGCAGGGAA...GTTTAAACGGCACGGGACTCTCTTTGTTGCAGGCCAGACGGGTGCAGGGAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586653.5
ENST00000586810.5
ENST00000592683.5
3UTR-3UTR TCA 90 bp CAGCTGTGGCTTTCAGAAGAATGGGAATGCTGCGCTGATTTTAGCCAGCCACTGACTTTCCGGAGGCCTTaGGGGAAATGCACACTGTCC +
Preference number: 2 (lower is better)
Translates to: QLWLSEEWECCADFSQPLTFRRP*GKCTLS
Trigger: GGACAGTGTGCATTTCCCTCAAGGCCTCCGGAAAGT...CAGTGGCTGGCTAAAATCAGCGCAGCATTCCCATTCTTCTGAAAGCCACAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR CAA 90 bp AGGCACCAGGGTTCAAGAAGGAACTTGCGTGTTGTAGGATCTGAGTaGGGGCGGCTCTATTCCGACTATCCATCGATCTCCTCTTCCTCA +
Preference number: 2 (lower is better)
Translates to: RHQGSRRNLRVVGSE*GRLYSDYPSISSSS
Trigger: TGAGGAAGAGGAGATCGATGGATAGTCGGAATAGAGCCGCCCCAACTCAGATCCTACAACACGCAAGTTCCTTCTTGAACCCTGGTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591208.1
3UTR-3UTR CCA 90 bp ACCCGTCTGGCCTGCAACAAAGAGAGTCCCGTGCCGTTTAAACAGGAAAGGGCTGCTGAGCAGATGCACTaGTACGTTTTTAGGCAAGTC +
Preference number: 2 (lower is better)
Translates to: TRLACNKESPVPFKQERAAEQMH*YVFRQV
Trigger: GACTTGCCTAAAAACGTACCAGTGCATCTGCTCAGC...AGCCCTTTCCTGTTTAAACGGCACGGGACTCTCTTTGTTGCAGGCCAGACGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
3UTR-3UTR GCA 90 bp ATGAAGAATTTGTGGAAGGCACTGGCAGCTTGGATGAGGACACCTCACTTCCAGTGTGGTTTCAGCTGGTaGATTATTTCAGCTGTGGCT +
Preference number: 2 (lower is better)
Translates to: MKNLWKALAAWMRTPHFQCGFSW*IISAVA
Trigger: AGCCACAGCTGAAATAATGCACCAGCTGAAACCACA...CTGGAAGTGAGGTGTCCTCATCCAAGCTGCCAGTGCCTTCCACAAATTCTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR-3UTR TCA 90 bp AAGTCCCATACTGCATATTCATATAAGGCAACACGGCACAATTTCAGGCTTCATACTTGGCTGCATTTGTaGGGGGCCGACACCAACACA +
Preference number: 2 (lower is better)
Translates to: KSHTAYSYKATRHNFRLHTWLHL*GADTNT
Trigger: TGTGTTGGTGTCGGCCCCTCACAAATGCAGCCAAGT...ATGAAGCCTGAAATTGTGCCGTGTTGCCTTATATGAATATGCAGTATGGGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317702.10
3UTR-3UTR CCA 90 bp ACCTATGAAGAATTTGTGGAAGGCACTGGCAGCTTGGATGAGGACACCTCACTTTGGCTTTCAGAAGAATaGGAATGCTGCGCTGATTTT +
Preference number: 2 (lower is better)
Translates to: TYEEFVEGTGSLDEDTSLWLSEE*ECCADF
Trigger: AAAATCAGCGCAGCATTCCCATTCTTCTGAAAGCCA...AAGTGAGGTGTCCTCATCCAAGCTGCCAGTGCCTTCCACAAATTCTTCATAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR-3UTR TCA 90 bp GCACAATTTCAGGCTTCATCACAAAGGATGAAAAAGACTGTTTCTAACTCCCTCCATGGTGTGATCTTCTaGCTGGGTAGAACCCGCAAT +
Preference number: 2 (lower is better)
Translates to: AQFQASSQRMKKTVSNSLHGVIF*LGRTRN
Trigger: ATTGCGGGTTCTACCCAGTCAGAAGATCACACCATG...GAGGGAGTTAGAAACAGTCTTTTTCATCCTTTGTGATGAAGCCTGAAATTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317702.10
3UTR-3UTR TCA 90 bp CCCATACTGCATATTCATATAAGGCAACACGGCACAATTTCAGGCTTCATCACAAAAGTCTCCATGGTGTaGTCTTCTGACTGGGTAGAA +
Preference number: 2 (lower is better)
Translates to: PILHIHIRQHGTISGFITKVSMV*SSDWVE
Trigger: TTCTACCCAGTCAGAAGATCACACCATGGAGACTTT...TGTGATGAAGCCTGAAATTGTGCCGTGTTGCCTTATATGAATATGCAGTATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317702.10
3UTR CCA 72 bp GGGCTCCCAGACGTGCTGGAAAGGTTGAGCCCAGAGTaGCCGAGGCTGGACCCTGTGGCACCAAGTGGGGTC +
Preference number: 3 (lower is better)
Translates to: GLPDVLERLSPE*PRLDPVAPSGV
Trigger: GACCCCACTTGGTGCCACAGGGTCCAGCCTCGGCCACTCTGGGCTCAACCTTTCCAGCACGTCTGGGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR TCA 72 bp CCGAGGCTGGACCCTGTGGCACCAAGTGGGGTCGGCTaGCCGTGTGGCAGGGATCGTTGCACTGGACTCTTG +
Preference number: 3 (lower is better)
Translates to: PRLDPVAPSGVG*PCGRDRCTGLL
Trigger: CAAGAGTCCAGTGCAACGATCCCTGCCACACGGTCAGCCGACCCCACTTGGTGCCACAGGGTCCAGCCTCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR CCA 72 bp GGACCCTGTGGCACCAAGTGGGGTCGGCTGACCGTGTaGCAGGGATCGTTGCACTGGACTCTTGGCGTGTGG +
Preference number: 3 (lower is better)
Translates to: GPCGTKWGRLTV*QGSLHWTLGVW
Trigger: CCACACGCCAAGAGTCCAGTGCAACGATCCCTGCCACACGGTCAGCCGACCCCACTTGGTGCCACAGGGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR TCA 72 bp ATAGCCTCATTGGGCTCCCAGACGTGCTGGAAAGGTTaGGCCCAGAGTGGCCGAGGCTGGACCCTGTGGCAC +
Preference number: 3 (lower is better)
Translates to: IASLGSQTCWKG*AQSGRGWTLWH
Trigger: GTGCCACAGGGTCCAGCCTCGGCCACTCTGGGCTCAACCTTTCCAGCACGTCTGGGAGCCCAATGAGGCTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR-3UTR CAA 90 bp TTCCATGATGTGCTGTTAGCCAAAGGGAGGGGCCGGGGAAACAGGCACCCACCATGCCCTTTCGCCCAGTaGTTCCCTGCACCCGTCTGG +
Preference number: 3 (lower is better)
Translates to: FHDVLLAKGRGRGNRHPPCPFAQ*FPAPVW
Trigger: CCAGACGGGTGCAGGGAACAACTGGGCGAAAGGGCA...TGGTGGGTGCCTGTTTCCCCGGCCCCTCCCTTTGGCTAACAGCACATCATGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
3UTR TCA 72 bp CAAGGAGCGGGAAAAGGAGAAAGAGGAGCCCCCGGGTaGGAAAGTTGCCAACTAGAGGCCCAGAGGGAGGCC +
Preference number: 3 (lower is better)
Translates to: QGAGKGERGAPG*ESCQLEAQREA
Trigger: GGCCTCCCTCTGGGCCTCTAGTTGGCAACTTTCTCACCCGGGGGCTCCTCTTTCTCCTTTTCCCGCTCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR CCA 72 bp TGGGGTCGGCTGACCGTGTGGCAGGGATCGTTGCACTaGACTCTTGGCGTGTGGGAAGGGATGCTTTCTCTT +
Preference number: 3 (lower is better)
Translates to: WGRLTVWQGSLH*TLGVWEGMLSL
Trigger: AAGAGAAAGCATCCCTTCCCACACGCCAAGAGTCCAGTGCAACGATCCCTGCCACACGGTCAGCCGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR TCA 72 bp GGTCACAGTGGGTGGCAGGTGACTTTCCGGAGGCCTTaGGGGAAATGCACACTGTCCCATAGCCTCATTGGG +
Preference number: 3 (lower is better)
Translates to: GHSGWQVTFRRP*GKCTLSHSLIG
Trigger: CCCAATGAGGCTATGGGACAGTGTGCATTTCCCTCAAGGCCTCCGGAAAGTCACCTGCCACCCACTGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR GCA 72 bp CCTGCACCCGTCTGGCCTGCAACAAAGAGAGTCCCGTaGCGTTTAAACAGGAAAGGGCTGCGCCATCACCAT +
Preference number: 3 (lower is better)
Translates to: PAPVWPATKRVP*RLNRKGLRHHH
Trigger: ATGGTGATGGCGCAGCCCTTTCCTGTTTAAACGGCACGGGACTCTCTTTGTTGCAGGCCAGACGGGTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586653.5
ENST00000586810.5
ENST00000592683.5
3UTR TCA 72 bp GTCCTTTCAGCCTCAGAGGTCACAGTGGGTGGCAGGTaGCTTTCCGGAGGCCTTGAGGGAAATGCACACTGT +
Preference number: 3 (lower is better)
Translates to: VLSASEVTVGGR*LSGGLEGNAHC
Trigger: ACAGTGTGCATTTCCCTCAAGGCCTCCGGAAAGTCACCTGCCACCCACTGTGACCTCTGAGGCTGAAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR TCA 72 bp CTTGGTCACCGACAAGGAGGGTGTGAAGTGATTCCATaGTGTGCTGTTAGCCAAAGGGAGGGGCCGGGGAAA +
Preference number: 3 (lower is better)
Translates to: LGHRQGGCEVIP*CAVSQREGPGK
Trigger: TTTCCCCGGCCCCTCCCTTTGGCTAACAGCACATCATGGAATCACTTCACACCCTCCTTGTCGGTGACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
3UTR-3UTR CAA 90 bp AGGCCATCTCAGTCTGTCCACTGTGGTTTCAGCTGGTGCATTATTTCAGCTGTGCGTTGCACTGGACTCTaGGCGTGTGGGAAGGGATGC +
Preference number: 3 (lower is better)
Translates to: RPSQSVHCGFSWCIISAVRCTGL*ACGKGC
Trigger: GCATCCCTTCCCACACGCCAAGAGTCCAGTGCAACG...CACAGCTGAAATAATGCACCAGCTGAAACCACAGTGGACAGACTGAGATGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR TCA 72 bp TCACCATGCTTGGTCACCGACAAGGAGGGTGTGAAGTaGTTCCATGATGTGCTGTTAGCCAAAGGGAGGGGC +
Preference number: 3 (lower is better)
Translates to: SPCLVTDKEGVK*FHDVLLAKGRG
Trigger: GCCCCTCCCTTTGGCTAACAGCACATCATGGAATCACTTCACACCCTCCTTGTCGGTGACCAAGCATGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
3UTR CCA 72 bp GAGGCCCAGAGGGAGGCCATCTCAGTCTGTCCACTGTaGTTTCAGCTGGTGCATTATTTCAGCTGTGGCTTT +
Preference number: 3 (lower is better)
Translates to: EAQREAISVCPL*FQLVHYFSCGF
Trigger: AAAGCCACAGCTGAAATAATGCACCAGCTGAAACCACAGTGGACAGACTGAGATGGCCTCCCTCTGGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR CCA 72 bp TGTTCCCTGCACCCGTCTGGCCTATCAACTGAAGACTaGTTAAATCCACGGCGGTATCTCTGCAGAGGATAC +
Preference number: 3 (lower is better)
Translates to: CSLHPSGLSTED*LNPRRYLCRGY
Trigger: GTATCCTCTGCAGAGATACCGCCGTGGATTTAACCAGTCTTCAGTTGATAGGCCAGACGGGTGCAGGGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590388.5
3UTR CCA 72 bp CAGGCACCCACCAACGGTGCAGCTGAGCAGATGCACTaGTACGTTTTTAGGCAAGTCAAAGTAGCTACTGGT +
Preference number: 3 (lower is better)
Translates to: QAPTNGAAEQMH*YVFRQVKVATG
Trigger: ACCAGTAGCTACTTTGACTTGCCTAAAAACGTACCAGTGCATCTGCTCAGCTGCACCGTTGGTGGGTGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
3UTR TCA 72 bp CCAGGGTTCAAGAAGGAACTTGCGTGTTGTAGGATCTaGGTTGGGGCGGCTCTATTCCGACTATCCATCGAT +
Preference number: 3 (lower is better)
Translates to: PGFKKELACCRI*VGAALFRLSID
Trigger: ATCGATGGATAGTCGGAATAGAGCCGCCCCAACTCAGATCCTACAACACGCAAGTTCCTTCTTGAACCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591208.1
3UTR-3UTR CAA 90 bp TTCCATGATGTGCTGTTAGCCAAAGGGAGGGGCCGGGGAAACAGGCACCCACCATACATTTTGACCTGGTaGTTCCATGTTAAAGAGGTA +
Preference number: 3 (lower is better)
Translates to: FHDVLLAKGRGRGNRHPPYILTW*FHVKEV
Trigger: TACCTCTTTAACATGGAACAACCAGGTCAAAATGTA...TGGTGGGTGCCTGTTTCCCCGGCCCCTCCCTTTGGCTAACAGCACATCATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586810.5
3UTR-3UTR CAA 90 bp GAAGTTTATTTTGTGGCCCCTCAGTTCTCTTTCAAGTCCTCTAGTAGAAAGTCTGGTTCAAGAAGGAACTaGCGTGTTGTAGGATCTGAG +
Preference number: 3 (lower is better)
Translates to: EVYFVAPQFSFKSSSRKSGSRRN*RVVGSE
Trigger: CTCAGATCCTACAACACGCAAGTTCCTTCTTGAACC...AGACTTTCTACTAGAGGACTTGAAAGAGAACTGAGGGGCCACAAAATAAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317702.10
3UTR CCA 72 bp TTCCATGTTAAAGAGGTAATTCTATCAACTGAAGACTaGTTAAATCCACGGCGGTATCTCTGCAGAGGATAC +
Preference number: 3 (lower is better)
Translates to: FHVKEVILSTED*LNPRRYLCRGY
Trigger: GTATCCTCTGCAGAGATACCGCCGTGGATTTAACCAGTCTTCAGTTGATAGAATTACCTCTTTAACATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586810.5
CDS-3UTR CCA 90 bp GCCGAGGCTGGACCCTGTGGCACCAAGTGGGGTCGGCTGACCGTGTGGCAGGGAGGTCGGCTGACCGTGTaGCAGGGATCGTTGCACTGG +
Preference number: 4 (lower is better)
Translates to: AEAGPCGTKWGRLTVWQGGRLTV*QGSLHW
Trigger: CCAGTGCAACGATCCCTGCCACACGGTCAGCCGACC...TCCCTGCCACACGGTCAGCCGACCCCACTTGGTGCCACAGGGTCCAGCCTCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR CCA 90 bp GCCGAGGCTGGACCCTGTGGCACCAAGTGGGGTCGGCTGACCGTGTGGCAGGGACAGAGTGGCCGAGGCTaGACCCTGTGGCACCAAGTG +
Preference number: 4 (lower is better)
Translates to: AEAGPCGTKWGRLTVWQGQSGRG*TLWHQV
Trigger: CACTTGGTGCCACAGGGTCCAGCCTCGGCCACTCTG...TCCCTGCCACACGGTCAGCCGACCCCACTTGGTGCCACAGGGTCCAGCCTCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR GCA 90 bp AGAGTGGCCGAGGCTGGACCCTGTGGCACCAAGTGGGGTCGGCTGACCGTGTGGGCTAGGAACTGGCTCTaGGGACGACAGCGGCAACTG +
Preference number: 4 (lower is better)
Translates to: RVAEAGPCGTKWGRLTVWARNWL*GRQRQL
Trigger: CAGTTGCCGCTGTCGTCCGCAGAGCCAGTTCCTAGC...CCACACGGTCAGCCGACCCCACTTGGTGCCACAGGGTCCAGCCTCGGCCACTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR GCA 90 bp GCCGAGGCTGGACCCTGTGGCACCAAGTGGGGTCGGCTGACCGTGTGGCAGGGAGCGTGTGGGAAGGGATaGTTTCTCTTTGTCGCCCAC +
Preference number: 4 (lower is better)
Translates to: AEAGPCGTKWGRLTVWQGACGKG*FLFVAH
Trigger: GTGGGCGACAAAGAGAAAGCATCCCTTCCCACACGC...TCCCTGCCACACGGTCAGCCGACCCCACTTGGTGCCACAGGGTCCAGCCTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR CCA 90 bp GCCGAGGCTGGACCCTGTGGCACCAAGTGGGGTCGGCTGACCGTGTGGCAGGGAGTTGCACTGGACTCTTaGCGTGTGGGAAGGGATGCT +
Preference number: 4 (lower is better)
Translates to: AEAGPCGTKWGRLTVWQGVALDS*RVGRDA
Trigger: AGCATCCCTTCCCACACGCCAAGAGTCCAGTGCAAC...TCCCTGCCACACGGTCAGCCGACCCCACTTGGTGCCACAGGGTCCAGCCTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR GCA 90 bp TTCCATGATGTGCTGTTAGCCAAAGGGAGGGGCCGGGGAAACAGGCACCCACCATGGCGGGCGCGGCTCTaGGCTAGGAACTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: FHDVLLAKGRGRGNRHPPWRARL*ARNWLC
Trigger: GCAGAGCCAGTTCCTAGCGCAGAGCCGCGCCCGCCA...TGGTGGGTGCCTGTTTCCCCGGCCCCTCCCTTTGGCTAACAGCACATCATGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
CDS-3UTR GCA 90 bp CCCAGACGTGCTGGAAAGGTTGAGCCCAGAGTGGCCGAGGCTGGACCCTGTGGCGCACGCTGTCCATGGTaGCTGGCTCTAAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: PRRAGKVEPRVAEAGPCGARCPW*LALSPP
Trigger: TGGTGGACTTAGAGCCAGGCACCATGGACAGCGTGC...GCCACAGGGTCCAGCCTCGGCCACTCTGGGCTCAACCTTTCCAGCACGTCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR CCA 90 bp AGAGTGGCCGAGGCTGGACCCTGTGGCACCAAGTGGGGTCGGCTGACCGTGTGGCAGGGATCGTTGCACTaGACTCTTGGCGTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: RVAEAGPCGTKWGRLTVWQGSLH*TLGVWE
Trigger: TTCCCACACGCCAAGAGTCCAGTGCAACGATCCCTG...CCACACGGTCAGCCGACCCCACTTGGTGCCACAGGGTCCAGCCTCGGCCACTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR GCA 90 bp GCTGTTAGCCAAAGGGAGGGGCCGGGGAAACAGGCACCCACCAACGGTGCAGCTTTGATTCTCTCCAGCTaGAGCGCCGAGTCTCCCACG +
Preference number: 4 (lower is better)
Translates to: AVSQREGPGKQAPTNGAALILSS*SAESPT
Trigger: CGTGGGAGACTCGGCGCTGCAGCTGGAGAGAATCAA...AGCTGCACCGTTGGTGGGTGCCTGTTTCCCCGGCCCCTCCCTTTGGCTAACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
CDS-3UTR GCA 90 bp GCTGTTAGCCAAAGGGAGGGGCCGGGGAAACAGGCACCCACCAACGGTGCAGCTGCACGCTGTCCATGGTaGCTGGCTCTAAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: AVSQREGPGKQAPTNGAAARCPW*LALSPP
Trigger: TGGTGGACTTAGAGCCAGGCACCATGGACAGCGTGC...AGCTGCACCGTTGGTGGGTGCCTGTTTCCCCGGCCCCTCCCTTTGGCTAACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
CDS-3UTR GCA 90 bp ATTGGGCTCCCAGACGTGCTGGAAAGGTTGAGCCCAGAGTGGCCGAGGCTGGACTCAGGCCGGAAAAGCTaGCCAAAAGGCCCAGACCGC +
Preference number: 4 (lower is better)
Translates to: IGLPDVLERLSPEWPRLDSGRKS*PKGPDR
Trigger: GCGGTCTGGGCCTTTTGGGCAGCTTTTCCGGCCTGA...GTCCAGCCTCGGCCACTCTGGGCTCAACCTTTCCAGCACGTCTGGGAGCCCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR GCA 90 bp CCTGCAACAAAGAGAGTCCCGTGCCGTTTAAACAGGAAAGGGCTGCGCCATCACTGGCGGGCGCGGCTCTaGGCTAGGAACTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PATKRVPCRLNRKGLRHHWRARL*ARNWLC
Trigger: GCAGAGCCAGTTCCTAGCGCAGAGCCGCGCCCGCCA...GTGATGGCGCAGCCCTTTCCTGTTTAAACGGCACGGGACTCTCTTTGTTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586653.5
ENST00000586810.5
ENST00000592683.5
CDS-3UTR CCA 90 bp AAGTGGGGTCGGCTGACCGTGTGGCAGGGATCGTTGCACTGGACTCTTGGCGTGAGAGGTCACAGTGGGTaGCAGGTGACTTTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: KWGRLTVWQGSLHWTLGVRGHSG*QVTFRR
Trigger: CCTCCGGAAAGTCACCTGCCACCCACTGTGACCTCT...CACGCCAAGAGTCCAGTGCAACGATCCCTGCCACACGGTCAGCCGACCCCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
3UTR CAA 72 bp ACCAAGTGGGGTCGGCTGACCGTGTGGCAGGGATCGTaGCACTGGACTCTTGGCGTGTGGGAAGGGATGCTT +
Preference number: 4 (lower is better)
Translates to: TKWGRLTVWQGS*HWTLGVWEGML
Trigger: AAGCATCCCTTCCCACACGCCAAGAGTCCAGTGCAACGATCCCTGCCACACGGTCAGCCGACCCCACTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR GCA 90 bp CCAGTTGTTCCCTGCACCCGTCTGGCCTGCAACAAAGAGAGTCCCGTGCCGTTTTCAGGCCGGAAAAGCTaGCCAAAAGGCCCAGACCGC +
Preference number: 4 (lower is better)
Translates to: PVVPCTRLACNKESPVPFSGRKS*PKGPDR
Trigger: GCGGTCTGGGCCTTTTGGGCAGCTTTTCCGGCCTGA...AAACGGCACGGGACTCTCTTTGTTGCAGGCCAGACGGGTGCAGGGAACAACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586653.5
ENST00000586810.5
ENST00000592683.5
CDS-3UTR GCA 90 bp GCACCCGTCTGGCCTGCAACAAAGAGAGTCCCGTGCCGTTTAAACAGGAAAGGGCGCCCAGTTGTTCCCTaGACCCGTCTGGCCTGCAAC +
Preference number: 4 (lower is better)
Translates to: APVWPATKRVPCRLNRKGRPVVP*TRLACN
Trigger: GTTGCAGGCCAGACGGGTGCAGGGAACAACTGGGCG...CCCTTTCCTGTTTAAACGGCACGGGACTCTCTTTGTTGCAGGCCAGACGGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586653.5
ENST00000586810.5
ENST00000592683.5
CDS-3UTR CCA 90 bp AGTGGCCGAGGCTGGACCCTGTGGCACCAAGTGGGGTCGGCTGACCGTGTGGCAATATGGTTGAACTTTTaGGCCCCAGACCATTTGCGG +
Preference number: 4 (lower is better)
Translates to: SGRGWTLWHQVGSADRVAIWLNF*APDHLR
Trigger: CCGCAAATGGTCTGGGGCCCAAAAGTTCAACCATAT...TGCCACACGGTCAGCCGACCCCACTTGGTGCCACAGGGTCCAGCCTCGGCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR TCA 90 bp GGCCCAGCTGAAATGATGGGGAAAGGAGTCCTTAGTCCTTTCAGCCTCAGAGGTCCAAGTGGGGTCGGCTaGCCGTGTGGCAGGGATCGT +
Preference number: 4 (lower is better)
Translates to: GPAEMMGKGVLSPFSLRGPSGVG*PCGRDR
Trigger: ACGATCCCTGCCACACGGTCAGCCGACCCCACTTGG...ACCTCTGAGGCTGAAAGGACTAAGGACTCCTTTCCCCATCATTTCAGCTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR GCA 90 bp CCCGTGCCGTTTAAACAGGAAAGGGCTGCGCCATCACCATGCTTGGTCACCGACGCTGCGCCATCACCATaGTTGGTCACCGACAAGGAG +
Preference number: 4 (lower is better)
Translates to: PVPFKQERAAPSPCLVTDAAPSP*LVTDKE
Trigger: CTCCTTGTCGGTGACCAAGCATGGTGATGGCGCAGC...GTCGGTGACCAAGCATGGTGATGGCGCAGCCCTTTCCTGTTTAAACGGCACGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
CDS-3UTR GCA 90 bp CCAGTTGTTCCCTGCACCCGTCTGGCCTGCAACAAAGAGAGTCCCGTGCCGTTTTGCACCCGTCTGGCCTaGAACAAAGAGAGTCCCGTG +
Preference number: 4 (lower is better)
Translates to: PVVPCTRLACNKESPVPFCTRLA*NKESPV
Trigger: CACGGGACTCTCTTTGTTGCAGGCCAGACGGGTGCA...AAACGGCACGGGACTCTCTTTGTTGCAGGCCAGACGGGTGCAGGGAACAACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586653.5
ENST00000586810.5
ENST00000592683.5
CDS-3UTR GCA 90 bp ACCCGTCTGGCCTGCAACAAAGAGAGTCCCGTGCCGTTTAAACAGGAAAGGGCTCGCCCAGTTGTTCCCTaGACCCGTCTGGCCTGCAAC +
Preference number: 4 (lower is better)
Translates to: TRLACNKESPVPFKQERARPVVP*TRLACN
Trigger: GTTGCAGGCCAGACGGGTGCAGGGAACAACTGGGCG...AGCCCTTTCCTGTTTAAACGGCACGGGACTCTCTTTGTTGCAGGCCAGACGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586653.5
ENST00000586810.5
ENST00000592683.5
CDS-3UTR GCA 90 bp CCTGCAACAAAGAGAGTCCCGTGCCGTTTAAACAGGAAAGGGCTGCGCCATCACCGCCCAGTTGTTCCCTaGACCCGTCTGGCCTGCAAC +
Preference number: 4 (lower is better)
Translates to: PATKRVPCRLNRKGLRHHRPVVP*TRLACN
Trigger: GTTGCAGGCCAGACGGGTGCAGGGAACAACTGGGCG...GTGATGGCGCAGCCCTTTCCTGTTTAAACGGCACGGGACTCTCTTTGTTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586653.5
ENST00000586810.5
ENST00000592683.5
CDS-3UTR CCA 90 bp CGTTTAAACAGGAAAGGGCTGCGCCATCACCATGCTTGGTCACCGACAAGGAGGCTCTGCGCTAGGAACTaGCTCTGCGGACGACAGCGG +
Preference number: 4 (lower is better)
Translates to: RLNRKGLRHHHAWSPTRRLCARN*LCGRQR
Trigger: CCGCTGTCGTCCGCAGAGCCAGTTCCTAGCGCAGAG...CCTCCTTGTCGGTGACCAAGCATGGTGATGGCGCAGCCCTTTCCTGTTTAAACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
CDS-3UTR CCA 90 bp CAATTAAACCAGTGCACCATTCAGGGCCATAGGGTAGGAGGCACCAGGGTTCAAGCACGATCTCCCTCATaGCGGGCGCGGCTCTGCGCT +
Preference number: 4 (lower is better)
Translates to: QLNQCTIQGHRVGGTRVQARSPS*RARLCA
Trigger: AGCGCAGAGCCGCGCCCGCCATGAGGGAGATCGTGC...TTGAACCCTGGTGCCTCCTACCCTATGGCCCTGAATGGTGCACTGGTTTAATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317702.10
ENST00000591208.1
CDS-3UTR TCA 90 bp GGCTGCGCCATCACCATGCTTGGTCACCGACAAGGAGGGTGTGAAGTGATTCCACACCAACGGTGCAGCTaGGCAGATGCACTGGTACGT +
Preference number: 4 (lower is better)
Translates to: GCAITMLGHRQGGCEVIPHQRCS*ADALVR
Trigger: ACGTACCAGTGCATCTGCTCAGCTGCACCGTTGGTG...TGGAATCACTTCACACCCTCCTTGTCGGTGACCAAGCATGGTGATGGCGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
CDS-3UTR TCA 90 bp ATTGGGCTCCCAGACGTGCTGGAAAGGTTGAGCCCAGAGTGGCCGAGGCTGGACGCAGATGGGCAAAGATaGAGTTGTCAGGCCGGAAAA +
Preference number: 4 (lower is better)
Translates to: IGLPDVLERLSPEWPRLDADGQR*SCQAGK
Trigger: TTTTCCGGCCTGACAACTTCATCTTTGCCCATCTGC...GTCCAGCCTCGGCCACTCTGGGCTCAACCTTTCCAGCACGTCTGGGAGCCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR GCA 90 bp GTGGCAGGGATCGTTGCACTGGACTCTTGGCGTGTGGGAAGGGATGCTTTCTCTTTGATTCTCTCCAGCTaGAGCGCCGAGTCTCCCACG +
Preference number: 4 (lower is better)
Translates to: VAGIVALDSWRVGRDAFSLILSS*SAESPT
Trigger: CGTGGGAGACTCGGCGCTGCAGCTGGAGAGAATCAA...AGAGAAAGCATCCCTTCCCACACGCCAAGAGTCCAGTGCAACGATCCCTGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR GCA 90 bp GGCTGCGCCATCACCATGCTTGGTCACCGACAAGGAGGGTGTGAAGTGATTCCAGCACGCTGTCCATGGTaGCTGGCTCTAAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: GCAITMLGHRQGGCEVIPARCPW*LALSPP
Trigger: TGGTGGACTTAGAGCCAGGCACCATGGACAGCGTGC...TGGAATCACTTCACACCCTCCTTGTCGGTGACCAAGCATGGTGATGGCGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
CDS-3UTR GCA 90 bp ACCATTCAGGGCCATAGGGTAGGAGGCACCAGGGTTCAAGAAGGAACTTGCGTGTCAGGCCGGAAAAGCTaGCCAAAAGGCCCAGACCGC +
Preference number: 4 (lower is better)
Translates to: TIQGHRVGGTRVQEGTCVSGRKS*PKGPDR
Trigger: GCGGTCTGGGCCTTTTGGGCAGCTTTTCCGGCCTGA...CACGCAAGTTCCTTCTTGAACCCTGGTGCCTCCTACCCTATGGCCCTGAATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317702.10
ENST00000591208.1
CDS-3UTR GCA 90 bp TTGTTCCCTGCACCCGTCTGGCCTGCAACAAAGAGAGTCCCGTGCCGTTTAAACTCAGGCCGGAAAAGCTaGCCAAAAGGCCCAGACCGC +
Preference number: 4 (lower is better)
Translates to: LFPAPVWPATKRVPCRLNSGRKS*PKGPDR
Trigger: GCGGTCTGGGCCTTTTGGGCAGCTTTTCCGGCCTGA...GTTTAAACGGCACGGGACTCTCTTTGTTGCAGGCCAGACGGGTGCAGGGAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586653.5
ENST00000586810.5
ENST00000592683.5
CDS-3UTR GCA 90 bp CCCTGCACCCGTCTGGCCTGCAACAAAGAGAGTCCCGTGCCGTTTAAACAGGAAGCTGCGCCATCACCATaGTTGGTCACCGACAAGGAG +
Preference number: 4 (lower is better)
Translates to: PCTRLACNKESPVPFKQEAAPSP*LVTDKE
Trigger: CTCCTTGTCGGTGACCAAGCATGGTGATGGCGCAGC...TTCCTGTTTAAACGGCACGGGACTCTCTTTGTTGCAGGCCAGACGGGTGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586653.5
ENST00000586810.5
ENST00000592683.5
CDS-3UTR GCA 90 bp ATTGGGCTCCCAGACGTGCTGGAAAGGTTGAGCCCAGAGTGGCCGAGGCTGGACTCCTCAGTTCCCCTGTaGAGATGGGCAAAGATGAAG +
Preference number: 4 (lower is better)
Translates to: IGLPDVLERLSPEWPRLDSSVPL*RWAKMK
Trigger: CTTCATCTTTGCCCATCTGCACAGGGGAACTGAGGA...GTCCAGCCTCGGCCACTCTGGGCTCAACCTTTCCAGCACGTCTGGGAGCCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR CCA 90 bp ACAAAGAGAGTCCCGTGCCGTTTAAACAGGAAAGGGCTGCGCCATCACCATGCTCTCTGCGCTAGGAACTaGCTCTGCGGACGACAGCGG +
Preference number: 4 (lower is better)
Translates to: TKRVPCRLNRKGLRHHHALCARN*LCGRQR
Trigger: CCGCTGTCGTCCGCAGAGCCAGTTCCTAGCGCAGAG...AGCATGGTGATGGCGCAGCCCTTTCCTGTTTAAACGGCACGGGACTCTCTTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
CDS-3UTR CCA 90 bp CATGATGTGCTGTTAGCCAAAGGGAGGGGCCGGGGAAACAGGCACCCACCAACGTCACTTCCCAAAACTTaGTGCCGATCTGGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: HDVLLAKGRGRGNRHPPTSLPKT*CRSGSR
Trigger: GCGGGAACCAGATCGGCACCAAGTTTTGGGAAGTGA...CGTTGGTGGGTGCCTGTTTCCCCGGCCCCTCCCTTTGGCTAACAGCACATCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
CDS-3UTR CCA 90 bp GACCGTGTGGCAGGGATCGTTGCACTGGACTCTTGGCGTGTGGGAAGGGATGCTTCACTTCCCAAAACTTaGTGCCGATCTGGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: DRVAGIVALDSWRVGRDASLPKT*CRSGSR
Trigger: GCGGGAACCAGATCGGCACCAAGTTTTGGGAAGTGA...AGCATCCCTTCCCACACGCCAAGAGTCCAGTGCAACGATCCCTGCCACACGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR CCA 90 bp CCAGTTGTTCCCTGCACCCGTCTGGCCTGCAACAAAGAGAGTCCCGTGCCGTTTTTCCCTGCACCCGTCTaGCCTGCAACAAAGAGAGTC +
Preference number: 4 (lower is better)
Translates to: PVVPCTRLACNKESPVPFFPAPV*PATKRV
Trigger: GACTCTCTTTGTTGCAGGCCAGACGGGTGCAGGGAA...AAACGGCACGGGACTCTCTTTGTTGCAGGCCAGACGGGTGCAGGGAACAACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586653.5
ENST00000586810.5
ENST00000592683.5
CDS-3UTR CCA 90 bp CACCAGGGTTCAAGAAGGAACTTGCGTGTTGTAGGATCTGAGTTGGGGCGGCTCAGCGAGTGCGTGAGCTaGAAGCCCCTTTCGCCCAGT +
Preference number: 4 (lower is better)
Translates to: HQGSRRNLRVVGSELGRLSECVS*KPLSPS
Trigger: ACTGGGCGAAAGGGGCTTCCAGCTCACGCACTCGCT...GAGCCGCCCCAACTCAGATCCTACAACACGCAAGTTCCTTCTTGAACCCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591208.1
CDS-3UTR TCA 90 bp CGTTTAAACAGGAAAGGGCTGCGCCATCACCATGCTTGGTCACCGACAAGGAGGCACCAACGGTGCAGCTaGGCAGATGCACTGGTACGT +
Preference number: 4 (lower is better)
Translates to: RLNRKGLRHHHAWSPTRRHQRCS*ADALVR
Trigger: ACGTACCAGTGCATCTGCTCAGCTGCACCGTTGGTG...CCTCCTTGTCGGTGACCAAGCATGGTGATGGCGCAGCCCTTTCCTGTTTAAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
CDS-3UTR TCA 90 bp GCTGTTAGCCAAAGGGAGGGGCCGGGGAAACAGGCACCCACCAACGGTGCAGCTAAGGAGGGTGTGAAGTaGTTCCATGATGTGCTGTTA +
Preference number: 4 (lower is better)
Translates to: AVSQREGPGKQAPTNGAAKEGVK*FHDVLL
Trigger: TAACAGCACATCATGGAATCACTTCACACCCTCCTT...AGCTGCACCGTTGGTGGGTGCCTGTTTCCCCGGCCCCTCCCTTTGGCTAACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
CDS-3UTR TCA 90 bp CCCGTGCCGTTTAAACAGGAAAGGGCTGCGCCATCACCATGCTTGGTCACCGACCCGACAAGGAGGGTGTaGAGTGATTCCATGATGTGC +
Preference number: 4 (lower is better)
Translates to: PVPFKQERAAPSPCLVTDPTRRV*SDSMMC
Trigger: GCACATCATGGAATCACTTCACACCCTCCTTGTCGG...GTCGGTGACCAAGCATGGTGATGGCGCAGCCCTTTCCTGTTTAAACGGCACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
CDS-3UTR GCA 90 bp GCAGCTGAGCAGATGCACTGGTACGTTTTTAGGCAAGTCAAAGTAGCTACTGGTTGGCGGGCGCGGCTCTaGGCTAGGAACTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: AAEQMHWYVFRQVKVATGWRARL*ARNWLC
Trigger: GCAGAGCCAGTTCCTAGCGCAGAGCCGCGCCCGCCA...ACCAGTAGCTACTTTGACTTGCCTAAAAACGTACCAGTGCATCTGCTCAGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
CDS-3UTR GCA 90 bp CTCAGTCTGTCCACTGTGGTTTCAGCTGGTGCATTATTTCAGCTGTGGCTTTCATGGCGGGCGCGGCTCTaGGCTAGGAACTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LSLSTVVSAGALFQLWLSWRARL*ARNWLC
Trigger: GCAGAGCCAGTTCCTAGCGCAGAGCCGCGCCCGCCA...TGAAAGCCACAGCTGAAATAATGCACCAGCTGAAACCACAGTGGACAGACTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR GCA 90 bp CACCAGGGTTCAAGAAGGAACTTGCGTGTTGTAGGATCTGAGTTGGGGCGGCTCGCACGCTGTCCATGGTaGCTGGCTCTAAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: HQGSRRNLRVVGSELGRLARCPW*LALSPP
Trigger: TGGTGGACTTAGAGCCAGGCACCATGGACAGCGTGC...GAGCCGCCCCAACTCAGATCCTACAACACGCAAGTTCCTTCTTGAACCCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317702.10
ENST00000591208.1
CDS-3UTR GCA 90 bp AACCAGTGCACCATTCAGGGCCATAGGGTAGGAGGCACCAGGGTTCAAGAAGGACGCCCAGTTGTTCCCTaGACCCGTCTGGCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: NQCTIQGHRVGGTRVQEGRPVVP*TRLAKD
Trigger: ATCTTTGGCCAGACGGGTGCAGGGAACAACTGGGCG...TCCTTCTTGAACCCTGGTGCCTCCTACCCTATGGCCCTGAATGGTGCACTGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317702.10
ENST00000591208.1
CDS-3UTR GCA 90 bp CATGATGTGCTGTTAGCCAAAGGGAGGGGCCGGGGAAACAGGCACCCACCAACGGTGCAGCTGAGCAGATaGACTGGTACGTTTTTAGGC +
Preference number: 4 (lower is better)
Translates to: HDVLLAKGRGRGNRHPPTVQLSR*TGTFLG
Trigger: GCCTAAAAACGTACCAGTGCATCTGCTCAGCTGCAC...CGTTGGTGGGTGCCTGTTTCCCCGGCCCCTCCCTTTGGCTAACAGCACATCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
CDS-3UTR GCA 90 bp TTGTTCCCTGCACCCGTCTGGCCTGCAACAAAGAGAGTCCCGTGCCGTTTAAACTGCACCCGTCTGGCCTaGAACAAAGAGAGTCCCGTG +
Preference number: 4 (lower is better)
Translates to: LFPAPVWPATKRVPCRLNCTRLA*NKESPV
Trigger: CACGGGACTCTCTTTGTTGCAGGCCAGACGGGTGCA...GTTTAAACGGCACGGGACTCTCTTTGTTGCAGGCCAGACGGGTGCAGGGAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586653.5
ENST00000586810.5
ENST00000592683.5
CDS-3UTR CCA 90 bp ACACCAACACAATTAAACCAGTGCACCATTCAGGGCCATAGGGTAGGAGGCACCCTCTGCGCTAGGAACTaGCTCTGCGGACGACAGCGG +
Preference number: 4 (lower is better)
Translates to: TPTQLNQCTIQGHRVGGTLCARN*LCGRQR
Trigger: CCGCTGTCGTCCGCAGAGCCAGTTCCTAGCGCAGAG...GGTGCCTCCTACCCTATGGCCCTGAATGGTGCACTGGTTTAATTGTGTTGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317702.10
CDS-3UTR CCA 90 bp CCTATGAAGAATTTGTGGAAGGCACTGGCAGCTTGGATGAGGACACCTCACTTCCGAGGCTGGACCCTGTaGCACCAAGTGGGGTCGGCT +
Preference number: 4 (lower is better)
Translates to: PMKNLWKALAAWMRTPHFRGWTL*HQVGSA
Trigger: AGCCGACCCCACTTGGTGCCACAGGGTCCAGCCTCG...GAAGTGAGGTGTCCTCATCCAAGCTGCCAGTGCCTTCCACAAATTCTTCATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR TCA 90 bp GCACCCGTCTGGCCTGCAACAAAGAGAGTCCCGTGCCGTTTAAACAGGAAAGGGCCGACAAGGAGGGTGTaGAGTGATTCCATGATGTGC +
Preference number: 4 (lower is better)
Translates to: APVWPATKRVPCRLNRKGPTRRV*SDSMMC
Trigger: GCACATCATGGAATCACTTCACACCCTCCTTGTCGG...CCCTTTCCTGTTTAAACGGCACGGGACTCTCTTTGTTGCAGGCCAGACGGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586653.5
ENST00000586810.5
ENST00000592683.5
CDS-3UTR GCA 90 bp AAAGAGAGTCCCGTGCCGTTTAAACAGGAAAGGGCTGCGCCATCACCATGCTTGTTGATTCTCTCCAGCTaGAGCGCCGAGTCTCCCACG +
Preference number: 4 (lower is better)
Translates to: KESPVPFKQERAAPSPCLLILSS*SAESPT
Trigger: CGTGGGAGACTCGGCGCTGCAGCTGGAGAGAATCAA...CAAGCATGGTGATGGCGCAGCCCTTTCCTGTTTAAACGGCACGGGACTCTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586653.5
ENST00000586810.5
ENST00000592683.5
CDS-3UTR GCA 90 bp GCAACAAAGAGAGTCCCGTGCCGTTTAAACAGGAAAGGGCTGCGCCATCACCATGCACGCTGTCCATGGTaGCTGGCTCTAAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: ATKRVPCRLNRKGLRHHHARCPW*LALSPP
Trigger: TGGTGGACTTAGAGCCAGGCACCATGGACAGCGTGC...ATGGTGATGGCGCAGCCCTTTCCTGTTTAAACGGCACGGGACTCTCTTTGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586653.5
ENST00000586810.5
ENST00000592683.5
CDS-3UTR CCA 90 bp AGGCCATCTCAGTCTGTCCACTGTGGTTTCAGCTGGTGCATTATTTCAGCTGTGCTCTGCGCTAGGAACTaGCTCTGCGGACGACAGCGG +
Preference number: 4 (lower is better)
Translates to: RPSQSVHCGFSWCIISAVLCARN*LCGRQR
Trigger: CCGCTGTCGTCCGCAGAGCCAGTTCCTAGCGCAGAG...CACAGCTGAAATAATGCACCAGCTGAAACCACAGTGGACAGACTGAGATGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR CCA 90 bp CCCTGCACCCGTCTGGCCTGCAACAAAGAGAGTCCCGTGCCGTTTAAACAGGAATCACTTCCCAAAACTTaGTGCCGATCTGGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: PCTRLACNKESPVPFKQESLPKT*CRSGSR
Trigger: GCGGGAACCAGATCGGCACCAAGTTTTGGGAAGTGA...TTCCTGTTTAAACGGCACGGGACTCTCTTTGTTGCAGGCCAGACGGGTGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586653.5
ENST00000586810.5
ENST00000592683.5
CDS-3UTR CCA 90 bp ACAAAGAGAGTCCCGTGCCGTTTAAACAGGAAAGGGCTGCGCCATCACCATGCTCGCCATCACCATGCTTaGTCACCGACAAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: TKRVPCRLNRKGLRHHHARHHHA*SPTRRV
Trigger: CACCCTCCTTGTCGGTGACCAAGCATGGTGATGGCG...AGCATGGTGATGGCGCAGCCCTTTCCTGTTTAAACGGCACGGGACTCTCTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586653.5
ENST00000586810.5
ENST00000592683.5
CDS-3UTR CCA 90 bp CGTTTAAACAGGAAAGGGCTGCGCCATCACCATGCTTGGTCACCGACAAGGAGGTTCCCTGCACCCGTCTaGCCTGCAACAAAGAGAGTC +
Preference number: 4 (lower is better)
Translates to: RLNRKGLRHHHAWSPTRRFPAPV*PATKRV
Trigger: GACTCTCTTTGTTGCAGGCCAGACGGGTGCAGGGAA...CCTCCTTGTCGGTGACCAAGCATGGTGATGGCGCAGCCCTTTCCTGTTTAAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
CDS-3UTR CCA 90 bp AGCCTCATTGGGCTCCCAGACGTGCTGGAAAGGTTGAGCCCAGAGTGGCCGAGGTCAGTCTGTCCACTGTaGTTTCAGCTGGTGCATTAT +
Preference number: 4 (lower is better)
Translates to: SLIGLPDVLERLSPEWPRSVCPL*FQLVHY
Trigger: ATAATGCACCAGCTGAAACCACAGTGGACAGACTGA...CCTCGGCCACTCTGGGCTCAACCTTTCCAGCACGTCTGGGAGCCCAATGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR CCA 90 bp TGCCAACTAGAGGCCCAGAGGGAGGCCATCTCAGTCTGTCCACTGTGGTTTCAGAAGGCACTGGCAGCTTaGATGAGGACACCTCACTTC +
Preference number: 4 (lower is better)
Translates to: CQLEAQREAISVCPLWFQKALAA*MRTPHF
Trigger: GAAGTGAGGTGTCCTCATCCAAGCTGCCAGTGCCTT...CTGAAACCACAGTGGACAGACTGAGATGGCCTCCCTCTGGGCCTCTAGTTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR TCA 90 bp ACCATTCAGGGCCATAGGGTAGGAGGCACCAGGGTTCAAGAAGGAACTTGCGTGCCGTCTGGCCAAAGATaGAGTTGTCAGGCCGGAAAA +
Preference number: 4 (lower is better)
Translates to: TIQGHRVGGTRVQEGTCVPSGQR*SCQAGK
Trigger: TTTTCCGGCCTGACAACTTCATCTTTGGCCAGACGG...CACGCAAGTTCCTTCTTGAACCCTGGTGCCTCCTACCCTATGGCCCTGAATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317702.10
ENST00000591208.1
CDS-3UTR GCA 90 bp ACACAATTAAACCAGTGCACCATTCAGGGCCATAGGGTAGGAGGCACCAGGGTTTTGATTCTCTCCAGCTaGAGCGCCGAGTCTCCCACG +
Preference number: 4 (lower is better)
Translates to: TQLNQCTIQGHRVGGTRVLILSS*SAESPT
Trigger: CGTGGGAGACTCGGCGCTGCAGCTGGAGAGAATCAA...AACCCTGGTGCCTCCTACCCTATGGCCCTGAATGGTGCACTGGTTTAATTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317702.10
ENST00000591208.1
CDS-3UTR GCA 90 bp CCAGTTGTTCCCTGCACCCGTCTGGCCTGCAACAAAGAGAGTCCCGTGCCGTTTATCTTCAAAATACGTTaGTGGGGAGCCAGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: PVVPCTRLACNKESPVPFIFKIR*WGAREE
Trigger: TTCCTCCCTGGCTCCCCAGCAACGTATTTTGAAGAT...AAACGGCACGGGACTCTCTTTGTTGCAGGCCAGACGGGTGCAGGGAACAACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586810.5
CDS-3UTR GCA 90 bp CCAGTTGTTCCCTGCACCCGTCTGGCCTGCAACAAAGAGAGTCCCGTGCCGTTTACAAAGAGAGTCCCGTaGCGTTTAAACAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: PVVPCTRLACNKESPVPFTKRVP*RLNRKG
Trigger: CCCTTTCCTGTTTAAACGGCACGGGACTCTCTTTGT...AAACGGCACGGGACTCTCTTTGTTGCAGGCCAGACGGGTGCAGGGAACAACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586653.5
ENST00000586810.5
ENST00000592683.5
CDS-3UTR CCA 90 bp GCAACAAAGAGAGTCCCGTGCCGTTTAAACAGGAAAGGGCTGCGCCATCACCATTTCCCTGCACCCGTCTaGCCTGCAACAAAGAGAGTC +
Preference number: 4 (lower is better)
Translates to: ATKRVPCRLNRKGLRHHHFPAPV*PATKRV
Trigger: GACTCTCTTTGTTGCAGGCCAGACGGGTGCAGGGAA...ATGGTGATGGCGCAGCCCTTTCCTGTTTAAACGGCACGGGACTCTCTTTGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586653.5
ENST00000586810.5
ENST00000592683.5
CDS-3UTR CCA 90 bp ACCTATGAAGAATTTGTGGAAGGCACTGGCAGCTTGGATGAGGACACCTCACTTAGGTTGAGCCCAGAGTaGCCGAGGCTGGACCCTGTG +
Preference number: 4 (lower is better)
Translates to: TYEEFVEGTGSLDEDTSLRLSPE*PRLDPV
Trigger: CACAGGGTCCAGCCTCGGCCACTCTGGGCTCAACCT...AAGTGAGGTGTCCTCATCCAAGCTGCCAGTGCCTTCCACAAATTCTTCATAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR TCA 90 bp CAATTAAACCAGTGCACCATTCAGGGCCATAGGGTAGGAGGCACCAGGGTTCAAGCGTGTTGTAGGATCTaGGTTGGGGCGGCTCTATTC +
Preference number: 4 (lower is better)
Translates to: QLNQCTIQGHRVGGTRVQACCRI*VGAALF
Trigger: GAATAGAGCCGCCCCAACTCAGATCCTACAACACGC...TTGAACCCTGGTGCCTCCTACCCTATGGCCCTGAATGGTGCACTGGTTTAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317702.10
ENST00000591208.1
CDS-3UTR TCA 90 bp GTTGGGGCGGCTCTATTCCGACTATCCATCGATCTCCTCTTCCTCATCCTCAAAGCGTGTTGTAGGATCTaGGTTGGGGCGGCTCTATTC +
Preference number: 4 (lower is better)
Translates to: VGAALFRLSIDLLFLILKACCRI*VGAALF
Trigger: GAATAGAGCCGCCCCAACTCAGATCCTACAACACGC...TTTGAGGATGAGGAAGAGGAGATCGATGGATAGTCGGAATAGAGCCGCCCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591208.1
CDS-3UTR TCA 90 bp GTTGGGGCGGCTCTATTCCGACTATCCATCGATCTCCTCTTCCTCATCCTCAAAACTTGGCTGCATTTGTaGGGGGCCGACACCAACACA +
Preference number: 4 (lower is better)
Translates to: VGAALFRLSIDLLFLILKTWLHL*GADTNT
Trigger: TGTGTTGGTGTCGGCCCCTCACAAATGCAGCCAAGT...TTTGAGGATGAGGAAGAGGAGATCGATGGATAGTCGGAATAGAGCCGCCCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591208.1
CDS-3UTR TCA 90 bp AACCAGTGCACCATTCAGGGCCATAGGGTAGGAGGCACCAGGGTTCAAGAAGGACATGGTGTGATCTTCTaGCTGGGTAGAACCCGCAAT +
Preference number: 4 (lower is better)
Translates to: NQCTIQGHRVGGTRVQEGHGVIF*LGRTRN
Trigger: ATTGCGGGTTCTACCCAGTCAGAAGATCACACCATG...TCCTTCTTGAACCCTGGTGCCTCCTACCCTATGGCCCTGAATGGTGCACTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317702.10
CDS-3UTR TCA 90 bp TTCCATGATGTGCTGTTAGCCAAAGGGAGGGGCCGGGGAAACAGGCACCCACCAAAGGAGGGTGTGAAGTaGTTCCATGATGTGCTGTTA +
Preference number: 4 (lower is better)
Translates to: FHDVLLAKGRGRGNRHPPKEGVK*FHDVLL
Trigger: TAACAGCACATCATGGAATCACTTCACACCCTCCTT...TGGTGGGTGCCTGTTTCCCCGGCCCCTCCCTTTGGCTAACAGCACATCATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
CDS-3UTR TCA 90 bp TTCAGCTGGTGCATTATTTCAGCTGTGGCTTTCAGAAGAATGGGAATGCTGCGCACAGTGGGTGGCAGGTaGCTTTCCGGAGGCCTTGAG +
Preference number: 4 (lower is better)
Translates to: FSWCIISAVAFRRMGMLRTVGGR*LSGGLE
Trigger: CTCAAGGCCTCCGGAAAGTCACCTGCCACCCACTGT...GCGCAGCATTCCCATTCTTCTGAAAGCCACAGCTGAAATAATGCACCAGCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR TCA 90 bp CTACCTATGAAGAATTTGTGGAAGGCACTGGCAGCTTGGATGAGGACACCTCACAGAGGAGCCCCCGGGTaGGAAAGTTGCCAACTAGAG +
Preference number: 4 (lower is better)
Translates to: LPMKNLWKALAAWMRTPHRGAPG*ESCQLE
Trigger: CTCTAGTTGGCAACTTTCTCACCCGGGGGCTCCTCT...GTGAGGTGTCCTCATCCAAGCTGCCAGTGCCTTCCACAAATTCTTCATAGGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR GCA 90 bp CCCTGCACCCGTCTGGCCTGCAACAAAGAGAGTCCCGTGCCGTTTAAACAGGAAACAAAGAGAGTCCCGTaGCGTTTAAACAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: PCTRLACNKESPVPFKQETKRVP*RLNRKG
Trigger: CCCTTTCCTGTTTAAACGGCACGGGACTCTCTTTGT...TTCCTGTTTAAACGGCACGGGACTCTCTTTGTTGCAGGCCAGACGGGTGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586653.5
ENST00000586810.5
ENST00000592683.5
CDS-3UTR CCA 90 bp ACAAAGAGAGTCCCGTGCCGTTTAAACAGGAAAGGGCTGCGCCATCACCATGCTTCACTTCCCAAAACTTaGTGCCGATCTGGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: TKRVPCRLNRKGLRHHHASLPKT*CRSGSR
Trigger: GCGGGAACCAGATCGGCACCAAGTTTTGGGAAGTGA...AGCATGGTGATGGCGCAGCCCTTTCCTGTTTAAACGGCACGGGACTCTCTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586653.5
ENST00000586810.5
ENST00000592683.5
CDS-3UTR CCA 90 bp GCACCCGTCTGGCCTGCAACAAAGAGAGTCCCGTGCCGTTTAAACAGGAAAGGGGCTGAGCAGATGCACTaGTACGTTTTTAGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: APVWPATKRVPCRLNRKGAEQMH*YVFRQV
Trigger: GACTTGCCTAAAAACGTACCAGTGCATCTGCTCAGC...CCCTTTCCTGTTTAAACGGCACGGGACTCTCTTTGTTGCAGGCCAGACGGGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
CDS-3UTR CCA 90 bp CTACCTATGAAGAATTTGTGGAAGGCACTGGCAGCTTGGATGAGGACACCTCACCCTCAGAGGTCACAGTaGGTGGCAGGTGACTTTCCG +
Preference number: 4 (lower is better)
Translates to: LPMKNLWKALAAWMRTPHPQRSQ*VAGDFP
Trigger: CGGAAAGTCACCTGCCACCCACTGTGACCTCTGAGG...GTGAGGTGTCCTCATCCAAGCTGCCAGTGCCTTCCACAAATTCTTCATAGGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR TCA 90 bp AAGTGGGGTCGGCTGACCGTGTGGCAGGGATCGTTGCACTGGACTCTTGGCGTGATATTTCTGAGACGATaGCTCATTGTAGTAGACGTT +
Preference number: 4 (lower is better)
Translates to: KWGRLTVWQGSLHWTLGVIFLRR*LIVVDV
Trigger: AACGTCTACTACAATGAGTCATCGTCTCAGAAATAT...CACGCCAAGAGTCCAGTGCAACGATCCCTGCCACACGGTCAGCCGACCCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR TCA 90 bp CTACCTATGAAGAATTTGTGGAAGGCACTGGCAGCTTGGATGAGGACACCTCACACTTTCCGGAGGCCTTaGGGGAAATGCACACTGTCC +
Preference number: 4 (lower is better)
Translates to: LPMKNLWKALAAWMRTPHTFRRP*GKCTLS
Trigger: GGACAGTGTGCATTTCCCTCAAGGCCTCCGGAAAGT...GTGAGGTGTCCTCATCCAAGCTGCCAGTGCCTTCCACAAATTCTTCATAGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR GCA 90 bp GAACACTTAATGGAAGGTGAAGTTTATTTTGTGGCCCCTCAGTTCTCTTTCAAGTGGCGGGCGCGGCTCTaGGCTAGGAACTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: EHLMEGEVYFVAPQFSFKWRARL*ARNWLC
Trigger: GCAGAGCCAGTTCCTAGCGCAGAGCCGCGCCCGCCA...CTTGAAAGAGAACTGAGGGGCCACAAAATAAACTTCACCTTCCATTAAGTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317702.10
CDS-3UTR GCA 90 bp ACCAACGGTGCAGCTGAGCAGATGCACTGGTACGTTTTTAGGCAAGTCAAAGTATTGATTCTCTCCAGCTaGAGCGCCGAGTCTCCCACG +
Preference number: 4 (lower is better)
Translates to: TNGAAEQMHWYVFRQVKVLILSS*SAESPT
Trigger: CGTGGGAGACTCGGCGCTGCAGCTGGAGAGAATCAA...TACTTTGACTTGCCTAAAAACGTACCAGTGCATCTGCTCAGCTGCACCGTTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
CDS-3UTR GCA 90 bp ACAAAGAGAGTCCCGTGCCGTTTAAACAGGAAAGGGCTGCGCCATCACCATGCTGTGCAGCTGAGCAGATaGACTGGTACGTTTTTAGGC +
Preference number: 4 (lower is better)
Translates to: TKRVPCRLNRKGLRHHHAVQLSR*TGTFLG
Trigger: GCCTAAAAACGTACCAGTGCATCTGCTCAGCTGCAC...AGCATGGTGATGGCGCAGCCCTTTCCTGTTTAAACGGCACGGGACTCTCTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
CDS-3UTR GCA 90 bp ACCCGTCTGGCCTGCAACAAAGAGAGTCCCGTGCCGTTTAAACAGGAAAGGGCTACAAAGAGAGTCCCGTaGCGTTTAAACAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: TRLACNKESPVPFKQERATKRVP*RLNRKG
Trigger: CCCTTTCCTGTTTAAACGGCACGGGACTCTCTTTGT...AGCCCTTTCCTGTTTAAACGGCACGGGACTCTCTTTGTTGCAGGCCAGACGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586653.5
ENST00000586810.5
ENST00000592683.5
CDS-3UTR GCA 90 bp ACCAACGGTGCAGCTGAGCAGATGCACTGGTACGTTTTTAGGCAAGTCAAAGTATGCACCCGTCTGGCCTaGAACAAAGAGAGTCCCGTG +
Preference number: 4 (lower is better)
Translates to: TNGAAEQMHWYVFRQVKVCTRLA*NKESPV
Trigger: CACGGGACTCTCTTTGTTGCAGGCCAGACGGGTGCA...TACTTTGACTTGCCTAAAAACGTACCAGTGCATCTGCTCAGCTGCACCGTTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
CDS-3UTR GCA 90 bp ATGAAGAATTTGTGGAAGGCACTGGCAGCTTGGATGAGGACACCTCACTTCCAGTGTGGCAGGGATCGTTaGACTGGACTCTTGGCGTGT +
Preference number: 4 (lower is better)
Translates to: MKNLWKALAAWMRTPHFQCGRDR*TGLLAC
Trigger: ACACGCCAAGAGTCCAGTGCAACGATCCCTGCCACA...CTGGAAGTGAGGTGTCCTCATCCAAGCTGCCAGTGCCTTCCACAAATTCTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR GCA 90 bp GAAAGTTGCCAACTAGAGGCCCAGAGGGAGGCCATCTCAGTCTGTCCACTGTGGTGTGGTTTCAGCTGGTaGATTATTTCAGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: ESCQLEAQREAISVCPLWCGFSW*IISAVA
Trigger: AGCCACAGCTGAAATAATGCACCAGCTGAAACCACA...CCACAGTGGACAGACTGAGATGGCCTCCCTCTGGGCCTCTAGTTGGCAACTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR CCA 90 bp ACACAATTAAACCAGTGCACCATTCAGGGCCATAGGGTAGGAGGCACCAGGGTTTCACTTCCCAAAACTTaGTGCCGATCTGGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: TQLNQCTIQGHRVGGTRVSLPKT*CRSGSR
Trigger: GCGGGAACCAGATCGGCACCAAGTTTTGGGAAGTGA...AACCCTGGTGCCTCCTACCCTATGGCCCTGAATGGTGCACTGGTTTAATTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317702.10
ENST00000591208.1
CDS-3UTR CCA 90 bp GCAACAAAGAGAGTCCCGTGCCGTTTAAACAGGAAAGGGCTGCGCCATCACCATTTCAAAATACGTTGCTaGGGAGCCAGGGAGGAACAC +
Preference number: 4 (lower is better)
Translates to: ATKRVPCRLNRKGLRHHHFKIRC*GAREEH
Trigger: GTGTTCCTCCCTGGCTCCCCAGCAACGTATTTTGAA...ATGGTGATGGCGCAGCCCTTTCCTGTTTAAACGGCACGGGACTCTCTTTGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586810.5
CDS-3UTR TCA 90 bp CCAGTTGTTCCCTGCACCCGTCTGGCCTGCAACAAAGAGAGTCCCGTGCCGTTTAGGCAGCCATACTTGTaGAATGGAAAGATCTTCAAA +
Preference number: 4 (lower is better)
Translates to: PVVPCTRLACNKESPVPFRQPYL*NGKIFK
Trigger: TTTGAAGATCTTTCCATTTCACAAGTATGGCTGCCT...AAACGGCACGGGACTCTCTTTGTTGCAGGCCAGACGGGTGCAGGGAACAACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586810.5
CDS-3UTR TCA 90 bp CCTATGAAGAATTTGTGGAAGGCACTGGCAGCTTGGATGAGGACACCTCACTTCCTGGCCCAGCTGAAATaGTGGGGAAAGGAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: PMKNLWKALAAWMRTPHFLAQLK*WGKESL
Trigger: TAAGGACTCCTTTCCCCATCATTTCAGCTGGGCCAG...GAAGTGAGGTGTCCTCATCCAAGCTGCCAGTGCCTTCCACAAATTCTTCATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR CCA 90 bp ACACAATTAAACCAGTGCACCATTCAGGGCCATAGGGTAGGAGGCACCAGGGTTTTCCCTGCACCCGTCTaGCCAAAGATGAAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: TQLNQCTIQGHRVGGTRVFPAPV*PKMKLS
Trigger: TGACAACTTCATCTTTGGCCAGACGGGTGCAGGGAA...AACCCTGGTGCCTCCTACCCTATGGCCCTGAATGGTGCACTGGTTTAATTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317702.10
ENST00000591208.1
3UTR CAA 72 bp GGTTCAAGAAGGAACTTGCGTGTTGTAGGATCTGAGTaGGGGCGGCTCTATTCCGACTATCCATCGATCTCC +
Preference number: 4 (lower is better)
Translates to: GSRRNLRVVGSE*GRLYSDYPSIS
Trigger: GGAGATCGATGGATAGTCGGAATAGAGCCGCCCCAACTCAGATCCTACAACACGCAAGTTCCTTCTTGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591208.1
CDS-3UTR TCA 90 bp ACCAACGGTGCAGCTGAGCAGATGCACTGGTACGTTTTTAGGCAAGTCAAAGTACCGACAAGGAGGGTGTaGAGTGATTCCATGATGTGC +
Preference number: 4 (lower is better)
Translates to: TNGAAEQMHWYVFRQVKVPTRRV*SDSMMC
Trigger: GCACATCATGGAATCACTTCACACCCTCCTTGTCGG...TACTTTGACTTGCCTAAAAACGTACCAGTGCATCTGCTCAGCTGCACCGTTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
CDS-3UTR TCA 90 bp TGCAACAAAGAGAGTCCCGTGCCGTTTAAACAGGAAAGGGCTGCGCCATCACCACATGATGTGCAAAGATaGAGTTGTCAGGCCGGAAAA +
Preference number: 4 (lower is better)
Translates to: CNKESPVPFKQERAAPSPHDVQR*SCQAGK
Trigger: TTTTCCGGCCTGACAACTTCATCTTTGCACATCATG...TGGTGATGGCGCAGCCCTTTCCTGTTTAAACGGCACGGGACTCTCTTTGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592683.5
CDS-3UTR TCA 90 bp TGCAACAAAGAGAGTCCCGTGCCGTTTAAACAGGAAAGGGCTGCGCCATCACCAAAGGAGGGTGTGAAGTaGTTCCATGATGTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: CNKESPVPFKQERAAPSPKEGVK*FHDVQR
Trigger: TCTTTGCACATCATGGAATCACTTCACACCCTCCTT...TGGTGATGGCGCAGCCCTTTCCTGTTTAAACGGCACGGGACTCTCTTTGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592683.5
CDS-3UTR CCA 90 bp TTGCACTGGACTCTTGGCGTGTGGGAAGGGATGCTTTCTCTTTGTCGCCCACTCTGGCTTTCAGAAGAATaGGAATGCTGCGCTGATTTT +
Preference number: 4 (lower is better)
Translates to: LHWTLGVWEGMLSLCRPLWLSEE*ECCADF
Trigger: AAAATCAGCGCAGCATTCCCATTCTTCTGAAAGCCA...GAGTGGGCGACAAAGAGAAAGCATCCCTTCCCACACGCCAAGAGTCCAGTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR TCA 90 bp CAGTTGTTCCCTGCACCCGTCTGGCCTGCAACAAAGAGAGTCCCGTGCCGTTTAATATTTCTGAGACGATaGCTCATTGTAGTAGACGTT +
Preference number: 4 (lower is better)
Translates to: QLFPAPVWPATKRVPCRLIFLRR*LIVVDV
Trigger: AACGTCTACTACAATGAGTCATCGTCTCAGAAATAT...TAAACGGCACGGGACTCTCTTTGTTGCAGGCCAGACGGGTGCAGGGAACAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586653.5
ENST00000586810.5
ENST00000592683.5
CDS-3UTR TCA 90 bp ACACCAACACAATTAAACCAGTGCACCATTCAGGGCCATAGGGTAGGAGGCACCAAAGTCTCCATGGTGTaGTCTTCTGACTGGGTAGAA +
Preference number: 4 (lower is better)
Translates to: TPTQLNQCTIQGHRVGGTKVSMV*SSDWVE
Trigger: TTCTACCCAGTCAGAAGATCACACCATGGAGACTTT...GGTGCCTCCTACCCTATGGCCCTGAATGGTGCACTGGTTTAATTGTGTTGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317702.10
CDS-3UTR TCA 90 bp TGCAACAAAGAGAGTCCCGTGCCGTTTAAACAGGAAAGGGCTGCGCCATCACCAGAGGTAATTCAAAGATaGAGTTGTCAGGCCGGAAAA +
Preference number: 4 (lower is better)
Translates to: CNKESPVPFKQERAAPSPEVIQR*SCQAGK
Trigger: TTTTCCGGCCTGACAACTTCATCTTTGAATTACCTC...TGGTGATGGCGCAGCCCTTTCCTGTTTAAACGGCACGGGACTCTCTTTGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586653.5
CDS-3UTR GCA 90 bp ACACAATTAAACCAGTGCACCATTCAGGGCCATAGGGTAGGAGGCACCAGGGTTACACAATTAAACCAGTaGACCATTCAGGGCCATAGG +
Preference number: 4 (lower is better)
Translates to: TQLNQCTIQGHRVGGTRVTQLNQ*TIQGHR
Trigger: CCTATGGCCCTGAATGGTGCACTGGTTTAATTGTGT...AACCCTGGTGCCTCCTACCCTATGGCCCTGAATGGTGCACTGGTTTAATTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317702.10
ENST00000591208.1
CDS-3UTR GCA 90 bp GTTGGGGCGGCTCTATTCCGACTATCCATCGATCTCCTCTTCCTCATCCTCAAAACACAATTAAACCAGTaGACCATTCAGGGCCATAGG +
Preference number: 4 (lower is better)
Translates to: VGAALFRLSIDLLFLILKTQLNQ*TIQGHR
Trigger: CCTATGGCCCTGAATGGTGCACTGGTTTAATTGTGT...TTTGAGGATGAGGAAGAGGAGATCGATGGATAGTCGGAATAGAGCCGCCCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591208.1
CDS-3UTR GCA 90 bp GCACAATTTCAGGCTTCATCACAAAGGATGAAAAAGACTGTTTCTAACTCCCTCTTGATTCTCTCCAGCTaGAGCGCCGAGTCTCCCACG +
Preference number: 4 (lower is better)
Translates to: AQFQASSQRMKKTVSNSLLILSS*SAESPT
Trigger: CGTGGGAGACTCGGCGCTGCAGCTGGAGAGAATCAA...GAGGGAGTTAGAAACAGTCTTTTTCATCCTTTGTGATGAAGCCTGAAATTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317702.10
CDS-3UTR GCA 90 bp GAACACTTAATGGAAGGTGAAGTTTATTTTGTGGCCCCTCAGTTCTCTTTCAAGGCACGCTGTCCATGGTaGCTGGCTCTAAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: EHLMEGEVYFVAPQFSFKARCPW*LALSPP
Trigger: TGGTGGACTTAGAGCCAGGCACCATGGACAGCGTGC...CTTGAAAGAGAACTGAGGGGCCACAAAATAAACTTCACCTTCCATTAAGTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317702.10
CDS-3UTR GCA 90 bp GAAGTTTATTTTGTGGCCCCTCAGTTCTCTTTCAAGTCCTCTAGTAGAAAGTCTCGCCCAGTTGTTCCCTaGACCCGTCTGGCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: EVYFVAPQFSFKSSSRKSRPVVP*TRLAKD
Trigger: ATCTTTGGCCAGACGGGTGCAGGGAACAACTGGGCG...AGACTTTCTACTAGAGGACTTGAAAGAGAACTGAGGGGCCACAAAATAAACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317702.10
CDS-3UTR GCA 90 bp ACAAAGAGAGTCCCGTGCCGTTTAAACAGGAAAGGGCTGCGCCATCACCATGCTAGTGATTCCATGATGTaGAAAGATGAAGTTGTCAGG +
Preference number: 4 (lower is better)
Translates to: TKRVPCRLNRKGLRHHHASDSMM*KDEVVR
Trigger: CCTGACAACTTCATCTTTGCACATCATGGAATCACT...AGCATGGTGATGGCGCAGCCCTTTCCTGTTTAAACGGCACGGGACTCTCTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592683.5
CDS-3UTR CCA 90 bp CAGTTGTTCCCTGCACCCGTCTGGCCTGCAACAAAGAGAGTCCCGTGCCGTTTAGCCATACTTGTGAAATaGAAAGATCTTCAAAATACG +
Preference number: 4 (lower is better)
Translates to: QLFPAPVWPATKRVPCRLAILVK*KDLQNT
Trigger: CGTATTTTGAAGATCTTTCCATTTCACAAGTATGGC...TAAACGGCACGGGACTCTCTTTGTTGCAGGCCAGACGGGTGCAGGGAACAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586810.5
CDS-3UTR TCA 90 bp CAAAGTCCCATACTGCATATTCATATAAGGCAACACGGCACAATTTCAGGCTTCCCGTCTGGCCAAAGATaGAGTTGTCAGGCCGGAAAA +
Preference number: 4 (lower is better)
Translates to: QSPILHIHIRQHGTISGFPSGQR*SCQAGK
Trigger: TTTTCCGGCCTGACAACTTCATCTTTGGCCAGACGG...GAAGCCTGAAATTGTGCCGTGTTGCCTTATATGAATATGCAGTATGGGACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317702.10
CDS-3UTR TCA 90 bp ACACAATTAAACCAGTGCACCATTCAGGGCCATAGGGTAGGAGGCACCAGGGTTATATTTCTGAGACGATaGCTCATTGTAGTAGACGTT +
Preference number: 4 (lower is better)
Translates to: TQLNQCTIQGHRVGGTRVIFLRR*LIVVDV
Trigger: AACGTCTACTACAATGAGTCATCGTCTCAGAAATAT...AACCCTGGTGCCTCCTACCCTATGGCCCTGAATGGTGCACTGGTTTAATTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317702.10
ENST00000591208.1
CDS-3UTR CCA 90 bp AAGTCCCATACTGCATATTCATATAAGGCAACACGGCACAATTTCAGGCTTCATTCACTTCCCAAAACTTaGTGCCGATCTGGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: KSHTAYSYKATRHNFRLHSLPKT*CRSGSR
Trigger: GCGGGAACCAGATCGGCACCAAGTTTTGGGAAGTGA...ATGAAGCCTGAAATTGTGCCGTGTTGCCTTATATGAATATGCAGTATGGGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317702.10
CDS-3UTR CCA 90 bp GTTTATTTTGTGGCCCCTCAGTTCTCTTTCAAGTCCTCTAGTAGAAAGTCTCCATTCCCTGCACCCGTCTaGCCAAAGATGAAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: VYFVAPQFSFKSSSRKSPFPAPV*PKMKLS
Trigger: TGACAACTTCATCTTTGGCCAGACGGGTGCAGGGAA...TGGAGACTTTCTACTAGAGGACTTGAAAGAGAACTGAGGGGCCACAAAATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317702.10
CDS-3UTR CCA 90 bp CAAAGTCCCATACTGCATATTCATATAAGGCAACACGGCACAATTTCAGGCTTCAGTAGAAAGTCTCCATaGTGTGATCTTCTGACTGGG +
Preference number: 4 (lower is better)
Translates to: QSPILHIHIRQHGTISGFSRKSP*CDLLTG
Trigger: CCCAGTCAGAAGATCACACCATGGAGACTTTCTACT...GAAGCCTGAAATTGTGCCGTGTTGCCTTATATGAATATGCAGTATGGGACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317702.10
CDS-3UTR TCA 90 bp GTTTATTTTGTGGCCCCTCAGTTCTCTTTCAAGTCCTCTAGTAGAAAGTCTCCAACACTTAATGGAAGGTaGAGTTTATTTTGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: VYFVAPQFSFKSSSRKSPTLNGR*SLFCGP
Trigger: GGGGCCACAAAATAAACTTCACCTTCCATTAAGTGT...TGGAGACTTTCTACTAGAGGACTTGAAAGAGAACTGAGGGGCCACAAAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317702.10
CDS-3UTR TCA 90 bp GTTAAAGAGGTAATTCTATCAACTGAAGACTGGTTAAATCCACGGCGGTATCTCATATTTCTGAGACGATaGCTCATTGTAGTAGACGTT +
Preference number: 4 (lower is better)
Translates to: VKEVILSTEDWLNPRRYLIFLRR*LIVVDV
Trigger: AACGTCTACTACAATGAGTCATCGTCTCAGAAATAT...GAGATACCGCCGTGGATTTAACCAGTCTTCAGTTGATAGAATTACCTCTTTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586810.5
CDS-3UTR GCA 90 bp GTTAAAGAGGTAATTCTATCAACTGAAGACTGGTTAAATCCACGGCGGTATCTCGTAAATATATGCGTCTaGCTGAACATACCAAAGATG +
Preference number: 4 (lower is better)
Translates to: VKEVILSTEDWLNPRRYLVNICV*LNIPKM
Trigger: CATCTTTGGTATGTTCAGGCAGACGCATATATTTAC...GAGATACCGCCGTGGATTTAACCAGTCTTCAGTTGATAGAATTACCTCTTTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586810.5
CDS-3UTR TCA 90 bp TCATCACAAAGGATGAAAAAGACTGTTTCTAACTCCCTCCTAATTTGCAGACATATATTTCTGAGACGATaGCTCATTGTAGTAGACGTT +
Preference number: 4 (lower is better)
Translates to: SSQRMKKTVSNSLLICRHIFLRR*LIVVDV
Trigger: AACGTCTACTACAATGAGTCATCGTCTCAGAAATAT...ATGTCTGCAAATTAGGAGGGAGTTAGAAACAGTCTTTTTCATCCTTTGTGATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317702.10
3UTR CAA 72 bp AAAGAAGTATTAGATAAGAATGATATGGTTGAACTTTaGGGCCCCAGACCATTTGCGGAAAAATCTACCTAT +
Preference number: 4 (lower is better)
Translates to: KEVLDKNDMVEL*GPRPFAEKSTY
Trigger: ATAGGTAGATTTTTCCGCAAATGGTCTGGGGCCCAAAAGTTCAACCATATCATTCTTATCTAATACTTCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR CAA 90 bp AGTGGCCGAGGCTGGACCCTGTGGCACCAAGTGGGGTCGGCTGACCGTGTGGCAGTGTGGCAGGGATCGTaGCACTGGACTCTTGGCGTG +
Preference number: 5 (lower is better)
Translates to: SGRGWTLWHQVGSADRVAVWQGS*HWTLGV
Trigger: CACGCCAAGAGTCCAGTGCAACGATCCCTGCCACAC...TGCCACACGGTCAGCCGACCCCACTTGGTGCCACAGGGTCCAGCCTCGGCCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR CAA 90 bp GCTGTTAGCCAAAGGGAGGGGCCGGGGAAACAGGCACCCACCAACGGTGCAGCTGCGCCATCACCATGCTaGGTCACCGACAAGGAGGGT +
Preference number: 5 (lower is better)
Translates to: AVSQREGPGKQAPTNGAAAPSPC*VTDKEG
Trigger: ACCCTCCTTGTCGGTGACCAAGCATGGTGATGGCGC...AGCTGCACCGTTGGTGGGTGCCTGTTTCCCCGGCCCCTCCCTTTGGCTAACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
CDS-3UTR CAA 90 bp GGCACCAAGTGGGGTCGGCTGACCGTGTGGCAGGGATCGTTGCACTGGACTCTTTGTCCCATAGCCTCATaGGGCTCCCAGACGTGCTGG +
Preference number: 5 (lower is better)
Translates to: GTKWGRLTVWQGSLHWTLCPIAS*GSQTCW
Trigger: CCAGCACGTCTGGGAGCCCAATGAGGCTATGGGACA...AAGAGTCCAGTGCAACGATCCCTGCCACACGGTCAGCCGACCCCACTTGGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR CAA 90 bp AGCCTCATTGGGCTCCCAGACGTGCTGGAAAGGTTGAGCCCAGAGTGGCCGAGGCCCCGGGTGAGAAAGTaGCCAACTAGAGGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: SLIGLPDVLERLSPEWPRPRVRK*PTRGPE
Trigger: CTCTGGGCCTCTAGTTGGCAACTTTCTCACCCGGGG...CCTCGGCCACTCTGGGCTCAACCTTTCCAGCACGTCTGGGAGCCCAATGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR CAA 90 bp GCCGAGGCTGGACCCTGTGGCACCAAGTGGGGTCGGCTGACCGTGTGGCAGGGAGATATGGTTGAACTTTaGGGCCCCAGACCATTTGCG +
Preference number: 5 (lower is better)
Translates to: AEAGPCGTKWGRLTVWQGDMVEL*GPRPFA
Trigger: CGCAAATGGTCTGGGGCCCAAAAGTTCAACCATATC...TCCCTGCCACACGGTCAGCCGACCCCACTTGGTGCCACAGGGTCCAGCCTCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR CAA 90 bp CCCAGACGTGCTGGAAAGGTTGAGCCCAGAGTGGCCGAGGCTGGACCCTGTGGCATCACTTCCCAAAACTaGGTGCCGATCTGGTTCCCG +
Preference number: 5 (lower is better)
Translates to: PRRAGKVEPRVAEAGPCGITSQN*VPIWFP
Trigger: CGGGAACCAGATCGGCACCAAGTTTTGGGAAGTGAT...GCCACAGGGTCCAGCCTCGGCCACTCTGGGCTCAACCTTTCCAGCACGTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR CAA 90 bp GGCTGCGCCATCACCATGCTTGGTCACCGACAAGGAGGGTGTGAAGTGATTCCATGCCCTTTCGCCCAGTaGTTCCCTGCACCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: GCAITMLGHRQGGCEVIPCPFAQ*FPAPVW
Trigger: CCAGACGGGTGCAGGGAACAACTGGGCGAAAGGGCA...TGGAATCACTTCACACCCTCCTTGTCGGTGACCAAGCATGGTGATGGCGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
CDS-3UTR CAA 90 bp ACCATTCAGGGCCATAGGGTAGGAGGCACCAGGGTTCAAGAAGGAACTTGCGTGTGCCCTTTCGCCCAGTaGTTCCCTGCACCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: TIQGHRVGGTRVQEGTCVCPFAQ*FPAPVW
Trigger: CCAGACGGGTGCAGGGAACAACTGGGCGAAAGGGCA...CACGCAAGTTCCTTCTTGAACCCTGGTGCCTCCTACCCTATGGCCCTGAATGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317702.10
CDS-3UTR CAA 90 bp CGTTTAAACAGGAAAGGGCTGCGCCATCACCATGCTTGGTCACCGACAAGGAGGTGCCCTTTCGCCCAGTaGTTCCCTGCACCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: RLNRKGLRHHHAWSPTRRCPFAQ*FPAPVW
Trigger: CCAGACGGGTGCAGGGAACAACTGGGCGAAAGGGCA...CCTCCTTGTCGGTGACCAAGCATGGTGATGGCGCAGCCCTTTCCTGTTTAAACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
CDS-3UTR CAA 90 bp CCCTGCACCCGTCTGGCCTGCAACAAAGAGAGTCCCGTGCCGTTTAAACAGGAAGCGCCATCACCATGCTaGGTCACCGACAAGGAGGGT +
Preference number: 5 (lower is better)
Translates to: PCTRLACNKESPVPFKQEAPSPC*VTDKEG
Trigger: ACCCTCCTTGTCGGTGACCAAGCATGGTGATGGCGC...TTCCTGTTTAAACGGCACGGGACTCTCTTTGTTGCAGGCCAGACGGGTGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586653.5
ENST00000586810.5
ENST00000592683.5
CDS-3UTR CAA 90 bp GCAACAAAGAGAGTCCCGTGCCGTTTAAACAGGAAAGGGCTGCGCCATCACCATTGCCCTTTCGCCCAGTaGTTCCCTGCACCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: ATKRVPCRLNRKGLRHHHCPFAQ*FPAPVW
Trigger: CCAGACGGGTGCAGGGAACAACTGGGCGAAAGGGCA...ATGGTGATGGCGCAGCCCTTTCCTGTTTAAACGGCACGGGACTCTCTTTGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586653.5
ENST00000586810.5
ENST00000592683.5
CDS-3UTR CAA 90 bp ACCCGTCTGGCCTGCAACAAAGAGAGTCCCGTGCCGTTTAAACAGGAAAGGGCTGCGCCATCACCATGCTaGGTCACCGACAAGGAGGGT +
Preference number: 5 (lower is better)
Translates to: TRLACNKESPVPFKQERAAPSPC*VTDKEG
Trigger: ACCCTCCTTGTCGGTGACCAAGCATGGTGATGGCGC...AGCCCTTTCCTGTTTAAACGGCACGGGACTCTCTTTGTTGCAGGCCAGACGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586653.5
ENST00000586810.5
ENST00000592683.5
CDS-3UTR CAA 90 bp TTGCACTGGACTCTTGGCGTGTGGGAAGGGATGCTTTCTCTTTGTCGCCCACTCCGTTGCACTGGACTCTaGGCGTGTGGGAAGGGATGC +
Preference number: 5 (lower is better)
Translates to: LHWTLGVWEGMLSLCRPLRCTGL*ACGKGC
Trigger: GCATCCCTTCCCACACGCCAAGAGTCCAGTGCAACG...GAGTGGGCGACAAAGAGAAAGCATCCCTTCCCACACGCCAAGAGTCCAGTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR CAA 90 bp ACACAATTAAACCAGTGCACCATTCAGGGCCATAGGGTAGGAGGCACCAGGGTTGCCCCTTTCGCCCAGTaGTTCCCTGCACCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: TQLNQCTIQGHRVGGTRVAPFAQ*FPAPVW
Trigger: CCAGACGGGTGCAGGGAACAACTGGGCGAAAGGGGC...AACCCTGGTGCCTCCTACCCTATGGCCCTGAATGGTGCACTGGTTTAATTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591208.1
CDS CCA 90 bp CGGCTGACCGTGTGGCAGGGATCGTTGCACTGGACTCTTGGCGTGTaGGAAGGGATGCTTTCTCTTTGTCGCCCACTCTTCATTCCTGTT +
Preference number: 5 (lower is better)
Translates to: RLTVWQGSLHWTLGV*EGMLSLCRPLFIPV
Trigger: AACAGGAATGAAGAGTGGGCGACAAAGAGAAAGCATCCCTTCCCACACGCCAAGAGTCCAGTGCAACGATCCCTGCCACACGGTCAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR CAA 90 bp CACCAGGGTTCAAGAAGGAACTTGCGTGTTGTAGGATCTGAGTTGGGGCGGCTCGTTGTAGGATCTGAGTaGGGGCGGCTCTATTCCGAC +
Preference number: 5 (lower is better)
Translates to: HQGSRRNLRVVGSELGRLVVGSE*GRLYSD
Trigger: GTCGGAATAGAGCCGCCCCAACTCAGATCCTACAAC...GAGCCGCCCCAACTCAGATCCTACAACACGCAAGTTCCTTCTTGAACCCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317702.10
ENST00000591208.1
CDS-3UTR CAA 90 bp CACCAGGGTTCAAGAAGGAACTTGCGTGTTGTAGGATCTGAGTTGGGGCGGCTCATCACTTCCCAAAACTaGGTGCCGATCTGGTTCCCG +
Preference number: 5 (lower is better)
Translates to: HQGSRRNLRVVGSELGRLITSQN*VPIWFP
Trigger: CGGGAACCAGATCGGCACCAAGTTTTGGGAAGTGAT...GAGCCGCCCCAACTCAGATCCTACAACACGCAAGTTCCTTCTTGAACCCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317702.10
ENST00000591208.1
CDS-3UTR CAA 90 bp GAAAGTTGCCAACTAGAGGCCCAGAGGGAGGCCATCTCAGTCTGTCCACTGTGGAGGGATGCTTTCTCTTaGTCGCCCACTCTTCATTCC +
Preference number: 5 (lower is better)
Translates to: ESCQLEAQREAISVCPLWRDAFS*SPTLHS
Trigger: GGAATGAAGAGTGGGCGACAAAGAGAAAGCATCCCT...CCACAGTGGACAGACTGAGATGGCCTCCCTCTGGGCCTCTAGTTGGCAACTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR CAA 90 bp ACAAAGAGAGTCCCGTGCCGTTTAAACAGGAAAGGGCTGCGCCATCACCATGCTATCACTTCCCAAAACTaGGTGCCGATCTGGTTCCCG +
Preference number: 5 (lower is better)
Translates to: TKRVPCRLNRKGLRHHHAITSQN*VPIWFP
Trigger: CGGGAACCAGATCGGCACCAAGTTTTGGGAAGTGAT...AGCATGGTGATGGCGCAGCCCTTTCCTGTTTAAACGGCACGGGACTCTCTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586653.5
ENST00000586810.5
ENST00000592683.5
CDS-3UTR CAA 90 bp ACACAATTAAACCAGTGCACCATTCAGGGCCATAGGGTAGGAGGCACCAGGGTTGTTGTAGGATCTGAGTaGGGGCGGCTCTATTCCGAC +
Preference number: 5 (lower is better)
Translates to: TQLNQCTIQGHRVGGTRVVVGSE*GRLYSD
Trigger: GTCGGAATAGAGCCGCCCCAACTCAGATCCTACAAC...AACCCTGGTGCCTCCTACCCTATGGCCCTGAATGGTGCACTGGTTTAATTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317702.10
ENST00000591208.1
CDS-3UTR CAA 90 bp GCCATCTCAGTCTGTCCACTGTGGTTTCAGCTGGTGCATTATTTCAGCTGTGGCGACTTTCCGGAGGCCTaGAGGGAAATGCACACTGTC +
Preference number: 5 (lower is better)
Translates to: AISVCPLWFQLVHYFSCGDFPEA*REMHTV
Trigger: GACAGTGTGCATTTCCCTCAAGGCCTCCGGAAAGTC...GCCACAGCTGAAATAATGCACCAGCTGAAACCACAGTGGACAGACTGAGATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR CAA 90 bp TGCCAACTAGAGGCCCAGAGGGAGGCCATCTCAGTCTGTCCACTGTGGTTTCAGCTACCTATGAAGAATTaGTGGAAGGCACTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: CQLEAQREAISVCPLWFQLPMKN*WKALAA
Trigger: AGCTGCCAGTGCCTTCCACAAATTCTTCATAGGTAG...CTGAAACCACAGTGGACAGACTGAGATGGCCTCCCTCTGGGCCTCTAGTTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS TCA 90 bp ATGTTTCGTTGTCTGCTCTGTCTTCAAGCGGGGGTTGCAATGTGGTaGGCAGAAGTTGACACTGTCCCGGCTCCTGTGGCTCTTAGGAAT +
Preference number: 5 (lower is better)
Translates to: MFRCLLCLQAGVAMW*AEVDTVPAPVALRN
Trigger: ATTCCTAAGAGCCACAGGAGCCGGGACAGTGTCAACTTCTGCTCACCACATTGCAACCCCCGCTTGAAGACAGAGCAGACAACGAAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590967.5
CDS-3UTR CAA 90 bp CAATTAAACCAGTGCACCATTCAGGGCCATAGGGTAGGAGGCACCAGGGTTCAAATCACTTCCCAAAACTaGGTGCCGATCTGGTTCCCG +
Preference number: 5 (lower is better)
Translates to: QLNQCTIQGHRVGGTRVQITSQN*VPIWFP
Trigger: CGGGAACCAGATCGGCACCAAGTTTTGGGAAGTGAT...TTGAACCCTGGTGCCTCCTACCCTATGGCCCTGAATGGTGCACTGGTTTAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317702.10
ENST00000591208.1
CDS-3UTR CAA 90 bp CATGATGTGCTGTTAGCCAAAGGGAGGGGCCGGGGAAACAGGCACCCACCAACGTACATTTTGACCTGGTaGTTCCATGTTAAAGAGGTA +
Preference number: 5 (lower is better)
Translates to: HDVLLAKGRGRGNRHPPTYILTW*FHVKEV
Trigger: TACCTCTTTAACATGGAACAACCAGGTCAAAATGTA...CGTTGGTGGGTGCCTGTTTCCCCGGCCCCTCCCTTTGGCTAACAGCACATCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
CDS-3UTR CAA 90 bp CTCAGTCTGTCCACTGTGGTTTCAGCTGGTGCATTATTTCAGCTGTGGCTTTCAGAAGGCACTGGCAGCTaGGATGAGGACACCTCACTT +
Preference number: 5 (lower is better)
Translates to: LSLSTVVSAGALFQLWLSEGTGS*DEDTSL
Trigger: AAGTGAGGTGTCCTCATCCAAGCTGCCAGTGCCTTC...TGAAAGCCACAGCTGAAATAATGCACCAGCTGAAACCACAGTGGACAGACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR CAA 90 bp ACCAACGGTGCAGCTGAGCAGATGCACTGGTACGTTTTTAGGCAAGTCAAAGTAATCACTTCCCAAAACTaGGTGCCGATCTGGTTCCCG +
Preference number: 5 (lower is better)
Translates to: TNGAAEQMHWYVFRQVKVITSQN*VPIWFP
Trigger: CGGGAACCAGATCGGCACCAAGTTTTGGGAAGTGAT...TACTTTGACTTGCCTAAAAACGTACCAGTGCATCTGCTCAGCTGCACCGTTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586653.5
ENST00000586810.5
CDS-3UTR CAA 90 bp CAATTAAACCAGTGCACCATTCAGGGCCATAGGGTAGGAGGCACCAGGGTTCAAGGTTCAAGAAGGAACTaGCGTGTTGTAGGATCTGAG +
Preference number: 5 (lower is better)
Translates to: QLNQCTIQGHRVGGTRVQGSRRN*RVVGSE
Trigger: CTCAGATCCTACAACACGCAAGTTCCTTCTTGAACC...TTGAACCCTGGTGCCTCCTACCCTATGGCCCTGAATGGTGCACTGGTTTAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317702.10
ENST00000591208.1
CDS-3UTR CAA 90 bp ACCTATGAAGAATTTGTGGAAGGCACTGGCAGCTTGGATGAGGACACCTCACTTTGGGCCCCAGACCATTaGCGGAAAAATCTACCTATG +
Preference number: 5 (lower is better)
Translates to: TYEEFVEGTGSLDEDTSLWAPDH*RKNLPM
Trigger: CATAGGTAGATTTTTCCGCAAATGGTCTGGGGCCCA...AAGTGAGGTGTCCTCATCCAAGCTGCCAGTGCCTTCCACAAATTCTTCATAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS-3UTR CAA 90 bp CGTTTAAACAGGAAAGGGCTGCGCCATCACCATGCTTGGTCACCGACAAGGAGGATACAGCTGGCTCCATaGTATGTGTGTAAATATATG +
Preference number: 5 (lower is better)
Translates to: RLNRKGLRHHHAWSPTRRIQLAP*YVCKYM
Trigger: CATATATTTACACACATACAATGGAGCCAGCTGTAT...CCTCCTTGTCGGTGACCAAGCATGGTGATGGCGCAGCCCTTTCCTGTTTAAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586810.5
CDS-3UTR CAA 90 bp GCCATCTCAGTCTGTCCACTGTGGTTTCAGCTGGTGCATTATTTCAGCTGTGGCATAAGAATGATATGGTaGAACTTTTGGGCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: AISVCPLWFQLVHYFSCGIRMIW*NFWAPD
Trigger: GTCTGGGGCCCAAAAGTTCAACCATATCATTCTTAT...GCCACAGCTGAAATAATGCACCAGCTGAAACCACAGTGGACAGACTGAGATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS CCA 90 bp GGGGAGCCAGGGAGGAACACTAGGGTACTAAACAGTGTATACAGCTaGCTCCATTGTATGTGTGTAAATATATGCGTCTGCCTGAACATA +
Preference number: 5 (lower is better)
Translates to: GEPGRNTRVLNSVYS*LHCMCVNICVCLNI
Trigger: TATGTTCAGGCAGACGCATATATTTACACACATACAATGGAGCCAGCTGTATACACTGTTTAGTACCCTAGTGTTCCTCCCTGGCTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586810.5
CDS-3UTR CAA 90 bp CATATTCATATAAGGCAACACGGCACAATTTCAGGCTTCATCACAAAGGATGAAGGTTCAAGAAGGAACTaGCGTGTTGTAGGATCTGAG +
Preference number: 5 (lower is better)
Translates to: HIHIRQHGTISGFITKDEGSRRN*RVVGSE
Trigger: CTCAGATCCTACAACACGCAAGTTCCTTCTTGAACC...TTCATCCTTTGTGATGAAGCCTGAAATTGTGCCGTGTTGCCTTATATGAATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317702.10
CDS-3UTR CAA 90 bp GTTTATTTTGTGGCCCCTCAGTTCTCTTTCAAGTCCTCTAGTAGAAAGTCTCCAAAGGTGAAGTTTATTTaGTGGCCCCTCAGTTCTCTT +
Preference number: 5 (lower is better)
Translates to: VYFVAPQFSFKSSSRKSPKVKFI*WPLSSL
Trigger: AAGAGAACTGAGGGGCCACAAAATAAACTTCACCTT...TGGAGACTTTCTACTAGAGGACTTGAAAGAGAACTGAGGGGCCACAAAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317702.10
CDS TCA 72 bp CCCCAGGCGCCCCGGCGGCCGAATTCCAGGCGCGCCTaGGCCGCCGGCAGCCGCTCCCAGTTGGGATGGGGG +
Preference number: 6 (lower is better)
Translates to: PQAPRRPNSRRA*AAGSRSQLGWG
Trigger: CCCCCATCCCAACTGGGAGCGGCTGCCGGCGGCTCAGGCGCGCCTGGAATTCGGCCGCCGGGGCGCCTGGGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417736.2
CDS GCA 72 bp CCGGGGCCCGCCAGCAGCCGACCCGCGGAGAGGCCCTaGACCGCGCCAGGCCCACCTTGGTGCCGATCTGGT +
Preference number: 6 (lower is better)
Translates to: PGPASSRPAERP*TAPGPPWCRSG
Trigger: ACCAGATCGGCACCAAGGTGGGCCTGGCGCGGTGCAGGGCCTCTCCGCGGGTCGGCTGCTGGCGGGCCCCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417736.2
CDS GCA 72 bp GGATGTGCACGATCTCCCTCATGGCGGGCGCGGCTCTaGGCTAGGAACTGGCTCTGCGGACGACAGCGGCAA +
Preference number: 6 (lower is better)
Translates to: GCARSPSWRARL*ARNWLCGRQRQ
Trigger: TTGCCGCTGTCGTCCGCAGAGCCAGTTCCTAGCGCAGAGCCGCGCCCGCCATGAGGGAGATCGTGCACATCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317702.10
ENST00000417736.2
ENST00000586653.5
ENST00000586810.5
ENST00000590103.5
ENST00000590388.5
ENST00000591909.5
CDS GCA 72 bp GGATGTGCACGATCTCCCTCATGGCGGGCGCGGCTCTaGGCTAGGAACTGGCTGTTCTTAGGGCCTCTTCGT +
Preference number: 6 (lower is better)
Translates to: GCARSPSWRARL*ARNWLFLGPLR
Trigger: ACGAAGAGGCCCTAAGAACAGCCAGTTCCTAGCGCAGAGCCGCGCCCGCCATGAGGGAGATCGTGCACATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590693.5
CDS TCA 72 bp TGTCTGCTCTGTCTTCAAGCGGGGGTTGCAATGTGGTaGGCAGAAGTTGACACTGTCCCGGCTCCTGTGGCT +
Preference number: 6 (lower is better)
Translates to: CLLCLQAGVAMW*AEVDTVPAPVA
Trigger: AGCCACAGGAGCCGGGACAGTGTCAACTTCTGCTCACCACATTGCAACCCCCGCTTGAAGACAGAGCAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590967.5
CDS CCA 72 bp GTGTGGCAGGGATCGTTGCACTGGACTCTTGGCGTGTaGGAAGGGATGCTTTCTCTTTGTCGCCCACTCTTC +
Preference number: 6 (lower is better)
Translates to: VWQGSLHWTLGV*EGMLSLCRPLF
Trigger: GAAGAGTGGGCGACAAAGAGAAAGCATCCCTTCCCACACGCCAAGAGTCCAGTGCAACGATCCCTGCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS CAA 72 bp GTCTTCAAGCGGGGGTTGCAATGTGGTGAGCAGAAGTaGACACTGTCCCGGCTCCTGTGGCTCTTAGGAATG +
Preference number: 6 (lower is better)
Translates to: VFKRGLQCGEQK*TLSRLLWLLGM
Trigger: CATTCCTAAGAGCCACAGGAGCCGGGACAGTGTCAACTTCTGCTCACCACATTGCAACCCCCGCTTGAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590967.5
CDS CAA 90 bp ATCGTTGCACTGGACTCTTGGCGTGTGGGAAGGGATGCTTTCTCTTaGTCGCCCACTCTTCATTCCTGTTTCTCCTCAGTTCCCCTGTGC +
Preference number: 6 (lower is better)
Translates to: IVALDSWRVGRDAFS*SPTLHSCFSSVPLC
Trigger: GCACAGGGGAACTGAGGAGAAACAGGAATGAAGAGTGGGCGACAAAGAGAAAGCATCCCTTCCCACACGCCAAGAGTCCAGTGCAACGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS CAA 72 bp CTGGACTCTTGGCGTGTGGGAAGGGATGCTTTCTCTTaGTCGCCCACTCTTCATTCCTGTTTCTCCTCAGTT +
Preference number: 6 (lower is better)
Translates to: LDSWRVGRDAFS*SPTLHSCFSSV
Trigger: AACTGAGGAGAAACAGGAATGAAGAGTGGGCGACAAAGAGAAAGCATCCCTTCCCACACGCCAAGAGTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591909.5
CDS TCA 72 bp CGCCATCACCATGCTTGGTCACCGACAAGGAGGGTGTaGAGTGATTCCATGATGTGCAAAGATGAAGTTGTC +
Preference number: 6 (lower is better)
Translates to: RHHHAWSPTRRV*SDSMMCKDEVV
Trigger: GACAACTTCATCTTTGCACATCATGGAATCACTTCACACCCTCCTTGTCGGTGACCAAGCATGGTGATGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592683.5
CDS TCA 72 bp GAAGAAGAAAGTGAGAAAGATGGAACCTACCAAAGATaGAGTTGTCAGGCCGGAAAAGCTGCCCAAAAGGCC +
Preference number: 6 (lower is better)
Translates to: EEESEKDGTYQR*SCQAGKAAQKA
Trigger: GGCCTTTTGGGCAGCTTTTCCGGCCTGACAACTTCATCTTTGGTAGGTTCCATCTTTCTCACTTTCTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587204.1
CDS GCA 72 bp TCAACTGAAGACTGGTTAAATCCACGGCGGTATCTCTaGAGAGGATACTATCAGCCATCAACAGGAATGAGG +
Preference number: 6 (lower is better)
Translates to: STEDWLNPRRYL*RGYYQPSTGMR
Trigger: CCTCATTCCTGTTGATGGCTGATAGTATCCTCTGCAGAGATACCGCCGTGGATTTAACCAGTCTTCAGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586810.5
ENST00000590388.5
CDS TCA 72 bp ACCTGGTTGTTCCATGTTAAAGAGGTAATTCAAAGATaGAGTTGTCAGGCCGGAAAAGCTGCCCAAAAGGCC +
Preference number: 6 (lower is better)
Translates to: TWLFHVKEVIQR*SCQAGKAAQKA
Trigger: GGCCTTTTGGGCAGCTTTTCCGGCCTGACAACTTCATCTTTGAATTACCTCTTTAACATGGAACAACCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586653.5
CDS CCA 72 bp GGGAGGAACACTAGGGTACTAAACAGTGTATACAGCTaGCTCCATTGTATGTGTGTAAATATATGCGTCTGC +
Preference number: 6 (lower is better)
Translates to: GRNTRVLNSVYS*LHCMCVNICVC
Trigger: GCAGACGCATATATTTACACACATACAATGGAGCCAGCTGTATACACTGTTTAGTACCCTAGTGTTCCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586810.5
CDS TCA 72 bp TATCAGCCATCAACAGGAATGAGGCAGCCATACTTGTaGAATGGAAAGATCTTCAAAATACGTTGCTGGGGA +
Preference number: 6 (lower is better)
Translates to: YQPSTGMRQPYL*NGKIFKIRCWG
Trigger: TCCCCAGCAACGTATTTTGAAGATCTTTCCATTTCACAAGTATGGCTGCCTCATTCCTGTTGATGGCTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586810.5
CDS TCA 72 bp TATCAGCCATCAACAGGAATGAGGCAGCCATACTTGTaGAATGGAAAGATCTTCAAAATACGTTGCAAAGAT +
Preference number: 6 (lower is better)
Translates to: YQPSTGMRQPYL*NGKIFKIRCKD
Trigger: ATCTTTGCAACGTATTTTGAAGATCTTTCCATTTCACAAGTATGGCTGCCTCATTCCTGTTGATGGCTGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590388.5