Pregenerated sensors for TUBB (Homo sapiens)
Ensembl gene IDs: ENSG00000196230Ensembl transcript IDs: ENST00000330914.7, ENST00000396384.1, ENST00000396389.5, ENST00000400530.1, ENST00000400531.5, ENST00000400534.5, ENST00000412136.5, ENST00000413547.5, ENST00000419551.5, ENST00000420400.5, ENST00000420618.1, ENST00000424734.5, ENST00000425102.1, ENST00000425136.5, ENST00000426754.5, ENST00000427480.5, ENST00000435546.5, ENST00000436335.5, ENST00000437490.5, ENST00000444441.1, ENST00000446385.1, ENST00000453350.1, ENST00000454454.5, ENST00000454620.1, ENST00000680530.1, ENST00000681421.1, ENST00000681435.1
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AATATTAAGTGTCAATTTAAGGAGAGCAGTGCAACTGAACTCAGGCCCCATGCCCCCTCCCAACCCCCTTaGTCCCTTTCTCTGATCAGG | + |
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Preference number: 2 (lower is better) Translates to: NIKCQFKESSATELRPHAPSQPP*SLSLIR Trigger: CCTGATCAGAGAAAGGGATCAAGGGGGTTGGGAGGG...GGCATGGGGCCTGAGTTCAGTTGCACTGCTCTCCTTAAATTGACACTTAATATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| 3UTR-3UTR CCA 90 bp | AGTGCAACTGAACTCAGGCCCCATGCCTCCATCAGCCAGCCGTGTTTCCCTAAAAGAGGAAGTATTAACTaGACAAATGGAATGGGCACC | + |
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Preference number: 2 (lower is better) Translates to: SATELRPHASISQPCFPKRGSIN*TNGMGT Trigger: GGTGCCCATTCCATTTGTCCAGTTAATACTTCCTCT...TTTAGGGAAACACGGCTGGCTGATGGAGGCATGGGGCCTGAGTTCAGTTGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| 3UTR-3UTR CCA 90 bp | AGTGTCAATTTAAGGAGAGCAGTGCAACTGAACTCAGGCCCCATGCCTCCATCAACTGGACAAATGGAATaGGCACCAGAAAGAAATACA | + |
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Preference number: 2 (lower is better) Translates to: SVNLRRAVQLNSGPMPPSTGQME*APERNT Trigger: TGTATTTCTTTCTGGTGCCCATTCCATTTGTCCAGT...TGATGGAGGCATGGGGCCTGAGTTCAGTTGCACTGCTCTCCTTAAATTGACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS-3UTR GCA 90 bp | AGTGCAACTGAACTCAGGCCCCATGCCTCCATCAGCCAGCCGTGTTTCCCTAAAGTCGCGGTTTGGAACTaGGCGGGAAGTGGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SATELRPHASISQPCFPKVAVWN*AGSGWW Trigger: CCACCACCCACTTCCCGCGCAGTTCCAAACCGCGAC...TTTAGGGAAACACGGCTGGCTGATGGAGGCATGGGGCCTGAGTTCAGTTGCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS-3UTR TCA 90 bp | CCCATGCCTCCATCAGCCAGCCGTGTTTCCCTAAATAAGCACACATCTCGCAGCCCCTCCCAACCCCCTTaGTCCCTTTCTCTGATCAGG | + |
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Preference number: 4 (lower is better) Translates to: PMPPSASRVSLNKHTSRSPSQPP*SLSLIR Trigger: CCTGATCAGAGAAAGGGATCAAGGGGGTTGGGAGGG...GCTGCGAGATGTGTGCTTATTTAGGGAAACACGGCTGGCTGATGGAGGCATGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS-3UTR GCA 90 bp | AGTGTCAATTTAAGGAGAGCAGTGCAACTGAACTCAGGCCCCATGCCTCCATCAAGCCCCTCTATCCGTTaGCGGCAGCTGGCGCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: SVNLRRAVQLNSGPMPPSSPSIR*RQLAPD Trigger: GTCTGGCGCCAGCTGCCGGCAACGGATAGAGGGGCT...TGATGGAGGCATGGGGCCTGAGTTCAGTTGCACTGCTCTCCTTAAATTGACACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS-3UTR GCA 90 bp | TTTAAGGAGAGCAGTGCAACTGAACTCAGGCCCCATGCCTCCATCAGCCAGCCGGCTGCCCAATCGACGTaGATTATTCTGTTGGCGCAC | + |
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Preference number: 4 (lower is better) Translates to: FKESSATELRPHASISQPAAQST*IILLAH Trigger: GTGCGCCAACAGAATAATGCACGTCGATTGGGCAGC...CGGCTGGCTGATGGAGGCATGGGGCCTGAGTTCAGTTGCACTGCTCTCCTTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS-3UTR CCA 90 bp | CCCATGCCTCCATCAGCCAGCCGTGTTTCCCTAAATAAGCACACATCTCGCAGCCGTGCATTATTCTGTTaGCGCACGGCGGCCTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PMPPSASRVSLNKHTSRSRALFC*RTAAFN Trigger: ATTGAAGGCCGCCGTGCGCCAACAGAATAATGCACG...GCTGCGAGATGTGTGCTTATTTAGGGAAACACGGCTGGCTGATGGAGGCATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS-3UTR CCA 90 bp | AATATTAAGTGTCAATTTAAGGAGAGCAGTGCAACTGAACTCAGGCCCCATGCCGAACTGCGCGGGAAGTaGGTGGTGGGCGGGCAAGCG | + |
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Preference number: 4 (lower is better) Translates to: NIKCQFKESSATELRPHAELRGK*VVGGQA Trigger: CGCTTGCCCGCCCACCACCCACTTCCCGCGCAGTTC...GGCATGGGGCCTGAGTTCAGTTGCACTGCTCTCCTTAAATTGACACTTAATATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS-3UTR TCA 90 bp | AGTGTCAATTTAAGGAGAGCAGTGCAACTGAACTCAGGCCCCATGCCTCCATCACACGTCGGACGTCTATaGCACAGCCCCTCTATCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SVNLRRAVQLNSGPMPPSHVGRL*HSPSIR Trigger: ACGGATAGAGGGGCTGTGTCATAGACGTCCGACGTG...TGATGGAGGCATGGGGCCTGAGTTCAGTTGCACTGCTCTCCTTAAATTGACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS-3UTR GCA 90 bp | CCCATGCCTCCATCAGCCAGCCGTGTTTCCCTAAATAAGCACACATCTCGCAGCGTTGTCCCTTGGAGCTaGCCAATCGACGTGCATTAT | + |
|
Preference number: 4 (lower is better) Translates to: PMPPSASRVSLNKHTSRSVVPWS*PIDVHY Trigger: ATAATGCACGTCGATTGGGCAGCTCCAAGGGACAAC...GCTGCGAGATGTGTGCTTATTTAGGGAAACACGGCTGGCTGATGGAGGCATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS-3UTR CCA 90 bp | AATATTAAGTGTCAATTTAAGGAGAGCAGTGCAACTGAACTCAGGCCCCATGCCTCTCTGGTCGCGGTTTaGAACTGCGCGGGAAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NIKCQFKESSATELRPHASLVAV*NCAGSG Trigger: CCCACTTCCCGCGCAGTTCCAAACCGCGACCAGAGA...GGCATGGGGCCTGAGTTCAGTTGCACTGCTCTCCTTAAATTGACACTTAATATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS-3UTR CCA 90 bp | GACTCAATATTAAGTGTCAATTTAAGGAGAGCAGTGCAACTGAACTCAGGCCCCTGGCGCCAGACTCTCTaGTCGCGGTTTGGAACTGCG | + |
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Preference number: 4 (lower is better) Translates to: DSILSVNLRRAVQLNSGPWRQTL*SRFGTA Trigger: CGCAGTTCCAAACCGCGACCAGAGAGTCTGGCGCCA...GGGGCCTGAGTTCAGTTGCACTGCTCTCCTTAAATTGACACTTAATATTGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS-3UTR CCA 90 bp | AGTGCAACTGAACTCAGGCCCCATGCCTCCATCAGCCAGCCGTGTTTCCCTAAAACTGGACAAATGGAATaGGCACCAGAAAGAAATACA | + |
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Preference number: 4 (lower is better) Translates to: SATELRPHASISQPCFPKTGQME*APERNT Trigger: TGTATTTCTTTCTGGTGCCCATTCCATTTGTCCAGT...TTTAGGGAAACACGGCTGGCTGATGGAGGCATGGGGCCTGAGTTCAGTTGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS-3UTR CCA 90 bp | GACTCAATATTAAGTGTCAATTTAAGGAGAGCAGTGCAACTGAACTCAGGCCCCAGAGGAAGTATTAACTaGACAAATGGAATGGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: DSILSVNLRRAVQLNSGPRGSIN*TNGMGT Trigger: GGTGCCCATTCCATTTGTCCAGTTAATACTTCCTCT...GGGGCCTGAGTTCAGTTGCACTGCTCTCCTTAAATTGACACTTAATATTGAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS CCA 90 bp | GACACAGCCCCTCTATCCGTTGCCGGCAGCTGGCGCCAGACTCTCTaGTCGCGGTTTGGAACTGCGCGGGAAGTGGGTGGTGGGCGGGCA | + |
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Preference number: 5 (lower is better) Translates to: DTAPLSVAGSWRQTL*SRFGTAREVGGGRA Trigger: TGCCCGCCCACCACCCACTTCCCGCGCAGTTCCAAACCGCGACCAGAGAGTCTGGCGCCAGCTGCCGGCAACGGATAGAGGGGCTGTGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS CCA 90 bp | ACGTCGGACGTCTATGACACAGCCCCTCTATCCGTTGCCGGCAGCTaGCGCCAGACTCTCTGGTCGCGGTTTGGAACTGCGCGGGAAGTG | + |
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Preference number: 5 (lower is better) Translates to: TSDVYDTAPLSVAGS*RQTLWSRFGTAREV Trigger: CACTTCCCGCGCAGTTCCAAACCGCGACCAGAGAGTCTGGCGCCAGCTGCCGGCAACGGATAGAGGGGCTGTGTCATAGACGTCCGACGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS GCA 90 bp | CCTTCCCCTAGACACTCGCTCCCCCGAGAAAGCCACAGCTTTCCCTaGTCTGGATATGTGCAGCGGGTCCCAAGTGCTCGGTGGGCGGAT | + |
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Preference number: 5 (lower is better) Translates to: PSPRHSLPRESHSFP*SGYVQRVPSARWAD Trigger: ATCCGCCCACCGAGCACTTGGGACCCGCTGCACATATCCAGAGCAGGGAAAGCTGTGGCTTTCTCGGGGGAGCGAGTGTCTAGGGGAAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 26 transcripts: ENST00000330914.7 ENST00000396384.1 ENST00000396389.5 ENST00000400530.1 ENST00000400531.5 ENST00000400534.5 ENST00000412136.5 ENST00000413547.5 ENST00000419551.5 ENST00000420400.5 ENST00000420618.1 ENST00000424734.5 ENST00000425102.1 ENST00000425136.5 ENST00000426754.5 ENST00000427480.5 ENST00000435546.5 ENST00000436335.5 ENST00000437490.5 ENST00000444441.1 ENST00000446385.1 ENST00000453350.1 ENST00000454454.5 ENST00000454620.1 ENST00000680530.1 ENST00000681421.1 |
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| CDS CCA 90 bp | AGCTTTCCCTGCTCTGGATATGTGCAGCGGGTCCCAAGTGCTCGGTaGGCGGATGGAGGTCGACCACACTTCGATAAGCGCCGCTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: SFPCSGYVQRVPSAR*ADGGRPHFDKRRSP Trigger: AGGAGAGCGGCGCTTATCGAAGTGTGGTCGACCTCCATCCGCCCACCGAGCACTTGGGACCCGCTGCACATATCCAGAGCAGGGAAAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000330914.7 ENST00000396389.5 ENST00000400531.5 ENST00000400534.5 ENST00000412136.5 ENST00000413547.5 ENST00000419551.5 ENST00000420400.5 ENST00000424734.5 ENST00000425136.5 ENST00000426754.5 ENST00000427480.5 ENST00000435546.5 ENST00000436335.5 ENST00000437490.5 ENST00000454454.5 ENST00000680530.1 ENST00000681421.1 |
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| CDS CCA 90 bp | GACAGCAGGGATCAGAGACTTGTCATTCCAGGTCCCGCCACCAGGTaGCAGCAGACGTCTTTGGCCCCGACGGTGGTTCACGAAAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: DSRDQRLVIPGPATR*QQTSLAPTVVHERD Trigger: GTCCCTTTCGTGAACCACCGTCGGGGCCAAAGACGTCTGCTGCCACCTGGTGGCGGGACCTGGAATGACAAGTCTCTGATCCCTGCTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681421.1 |
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| CDS GCA 90 bp | CGGGCAAGCGGTAGTGGGTTGTCCCTTGGAGCTGCCCAATCGACGTaGATTATTCTGTTGGCGCACGGCGGCCTTCAATTACCGTCTCAT | + |
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Preference number: 5 (lower is better) Translates to: RASGSGLSLGAAQST*IILLAHGGLQLPSH Trigger: ATGAGACGGTAATTGAAGGCCGCCGTGCGCCAACAGAATAATGCACGTCGATTGGGCAGCTCCAAGGGACAACCCACTACCGCTTGCCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS-3UTR CAA 90 bp | CCCATGCCTCCATCAGCCAGCCGTGTTTCCCTAAATAAGCACACATCTCGCAGCGCAAGCGGTAGTGGGTaGTCCCTTGGAGCTGCCCAA | + |
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Preference number: 5 (lower is better) Translates to: PMPPSASRVSLNKHTSRSASGSG*SLGAAQ Trigger: TTGGGCAGCTCCAAGGGACAACCCACTACCGCTTGC...GCTGCGAGATGTGTGCTTATTTAGGGAAACACGGCTGGCTGATGGAGGCATGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS-3UTR CAA 90 bp | AGTGCAACTGAACTCAGGCCCCATGCCTCCATCAGCCAGCCGTGTTTCCCTAAAGTAGTGGGTTGTCCCTaGGAGCTGCCCAATCGACGT | + |
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Preference number: 5 (lower is better) Translates to: SATELRPHASISQPCFPKVVGCP*ELPNRR Trigger: ACGTCGATTGGGCAGCTCCAAGGGACAACCCACTAC...TTTAGGGAAACACGGCTGGCTGATGGAGGCATGGGGCCTGAGTTCAGTTGCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS-3UTR CAA 90 bp | CCCATGCCTCCATCAGCCAGCCGTGTTTCCCTAAATAAGCACACATCTCGCAGCACGTGCATTATTCTGTaGGCGCACGGCGGCCTTCAA | + |
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Preference number: 5 (lower is better) Translates to: PMPPSASRVSLNKHTSRSTCIIL*AHGGLQ Trigger: TTGAAGGCCGCCGTGCGCCAACAGAATAATGCACGT...GCTGCGAGATGTGTGCTTATTTAGGGAAACACGGCTGGCTGATGGAGGCATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS-3UTR CAA 90 bp | AATATTAAGTGTCAATTTAAGGAGAGCAGTGCAACTGAACTCAGGCCCCATGCCCAGCCCCTCTATCCGTaGCCGGCAGCTGGCGCCAGA | + |
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Preference number: 5 (lower is better) Translates to: NIKCQFKESSATELRPHAQPLYP*PAAGAR Trigger: TCTGGCGCCAGCTGCCGGCAACGGATAGAGGGGCTG...GGCATGGGGCCTGAGTTCAGTTGCACTGCTCTCCTTAAATTGACACTTAATATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS-3UTR CAA 90 bp | AATATTAAGTGTCAATTTAAGGAGAGCAGTGCAACTGAACTCAGGCCCCATGCCCTCTCTGGTCGCGGTTaGGAACTGCGCGGGAAGTGG | + |
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Preference number: 5 (lower is better) Translates to: NIKCQFKESSATELRPHALSGRG*ELRGKW Trigger: CCACTTCCCGCGCAGTTCCAAACCGCGACCAGAGAG...GGCATGGGGCCTGAGTTCAGTTGCACTGCTCTCCTTAAATTGACACTTAATATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS CCA 72 bp | TGCCGGCAGCTGGCGCCAGACTCTCTGGTCGCGGTTTaGAACTGCGCGGGAAGTGGGTGGTGGGCGGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: CRQLAPDSLVAV*NCAGSGWWAGK Trigger: CTTGCCCGCCCACCACCCACTTCCCGCGCAGTTCCAAACCGCGACCAGAGAGTCTGGCGCCAGCTGCCGGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS CAA 72 bp | TTGCCGGCAGCTGGCGCCAGACTCTCTGGTCGCGGTTaGGAACTGCGCGGGAAGTGGGTGGTGGGCGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: LPAAGARLSGRG*ELRGKWVVGGQ Trigger: TTGCCCGCCCACCACCCACTTCCCGCGCAGTTCCAAACCGCGACCAGAGAGTCTGGCGCCAGCTGCCGGCAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS CAA 90 bp | CTCTATCCGTTGCCGGCAGCTGGCGCCAGACTCTCTGGTCGCGGTTaGGAACTGCGCGGGAAGTGGGTGGTGGGCGGGCAAGCGGTAGTG | + |
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Preference number: 6 (lower is better) Translates to: LYPLPAAGARLSGRG*ELRGKWVVGGQAVV Trigger: CACTACCGCTTGCCCGCCCACCACCCACTTCCCGCGCAGTTCCAAACCGCGACCAGAGAGTCTGGCGCCAGCTGCCGGCAACGGATAGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS CCA 72 bp | CCTCTATCCGTTGCCGGCAGCTGGCGCCAGACTCTCTaGTCGCGGTTTGGAACTGCGCGGGAAGTGGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: PLSVAGSWRQTL*SRFGTAREVGG Trigger: ACCACCCACTTCCCGCGCAGTTCCAAACCGCGACCAGAGAGTCTGGCGCCAGCTGCCGGCAACGGATAGAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS CAA 90 bp | CGCGGGAAGTGGGTGGTGGGCGGGCAAGCGGTAGTGGGTTGTCCCTaGGAGCTGCCCAATCGACGTGCATTATTCTGTTGGCGCACGGCG | + |
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Preference number: 6 (lower is better) Translates to: RGKWVVGGQAVVGCP*ELPNRRALFCWRTA Trigger: CGCCGTGCGCCAACAGAATAATGCACGTCGATTGGGCAGCTCCAAGGGACAACCCACTACCGCTTGCCCGCCCACCACCCACTTCCCGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS CAA 72 bp | ACACGTCGGACGTCTATGACACAGCCCCTCTATCCGTaGCCGGCAGCTGGCGCCAGACTCTCTGGTCGCGGT | + |
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Preference number: 6 (lower is better) Translates to: TRRTSMTQPLYP*PAAGARLSGRG Trigger: ACCGCGACCAGAGAGTCTGGCGCCAGCTGCCGGCAACGGATAGAGGGGCTGTGTCATAGACGTCCGACGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS CAA 90 bp | GGAACTGCGCGGGAAGTGGGTGGTGGGCGGGCAAGCGGTAGTGGGTaGTCCCTTGGAGCTGCCCAATCGACGTGCATTATTCTGTTGGCG | + |
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Preference number: 6 (lower is better) Translates to: GTAREVGGGRASGSG*SLGAAQSTCIILLA Trigger: CGCCAACAGAATAATGCACGTCGATTGGGCAGCTCCAAGGGACAACCCACTACCGCTTGCCCGCCCACCACCCACTTCCCGCGCAGTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS CCA 72 bp | GTCTATGACACAGCCCCTCTATCCGTTGCCGGCAGCTaGCGCCAGACTCTCTGGTCGCGGTTTGGAACTGCG | + |
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Preference number: 6 (lower is better) Translates to: VYDTAPLSVAGS*RQTLWSRFGTA Trigger: CGCAGTTCCAAACCGCGACCAGAGAGTCTGGCGCCAGCTGCCGGCAACGGATAGAGGGGCTGTGTCATAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS CAA 90 bp | CCAGAACAGACACGTCGGACGTCTATGACACAGCCCCTCTATCCGTaGCCGGCAGCTGGCGCCAGACTCTCTGGTCGCGGTTTGGAACTG | + |
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Preference number: 6 (lower is better) Translates to: PEQTRRTSMTQPLYP*PAAGARLSGRGLEL Trigger: CAGTTCCAAACCGCGACCAGAGAGTCTGGCGCCAGCTGCCGGCAACGGATAGAGGGGCTGTGTCATAGACGTCCGACGTGTCTGTTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS TCA 72 bp | CTGATCACCTCCCAGAACAGACACGTCGGACGTCTATaGCACAGCCCCTCTATCCGTTGCCGGCAGCTGGCG | + |
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Preference number: 6 (lower is better) Translates to: LITSQNRHVGRL*HSPSIRCRQLA Trigger: CGCCAGCTGCCGGCAACGGATAGAGGGGCTGTGTCATAGACGTCCGACGTGTCTGTTCTGGGAGGTGATCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS GCA 72 bp | CTTTCCCTGCTCTGGATATGTGCAGCGGGTCCCAAGTaGTCGGTGGGCGGATGGAGGTCGACCACACTTCGA | + |
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Preference number: 6 (lower is better) Translates to: LSLLWICAAGPK*SVGGWRSTTLR Trigger: TCGAAGTGTGGTCGACCTCCATCCGCCCACCGAGCACTTGGGACCCGCTGCACATATCCAGAGCAGGGAAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 26 transcripts: ENST00000330914.7 ENST00000396384.1 ENST00000396389.5 ENST00000400530.1 ENST00000400531.5 ENST00000400534.5 ENST00000412136.5 ENST00000413547.5 ENST00000419551.5 ENST00000420400.5 ENST00000420618.1 ENST00000424734.5 ENST00000425102.1 ENST00000425136.5 ENST00000426754.5 ENST00000427480.5 ENST00000435546.5 ENST00000436335.5 ENST00000437490.5 ENST00000444441.1 ENST00000446385.1 ENST00000453350.1 ENST00000454454.5 ENST00000454620.1 ENST00000680530.1 ENST00000681421.1 |
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| CDS GCA 72 bp | AGACACTCGCTCCCCCGAGAAAGCCACAGCTTTCCCTaGTCTGGATATGTGCAGCGGGTCCCAAGTGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: RHSLPRESHSFP*SGYVQRVPSAR Trigger: CCGAGCACTTGGGACCCGCTGCACATATCCAGAGCAGGGAAAGCTGTGGCTTTCTCGGGGGAGCGAGTGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 26 transcripts: ENST00000330914.7 ENST00000396384.1 ENST00000396389.5 ENST00000400530.1 ENST00000400531.5 ENST00000400534.5 ENST00000412136.5 ENST00000413547.5 ENST00000419551.5 ENST00000420400.5 ENST00000420618.1 ENST00000424734.5 ENST00000425102.1 ENST00000425136.5 ENST00000426754.5 ENST00000427480.5 ENST00000435546.5 ENST00000436335.5 ENST00000437490.5 ENST00000444441.1 ENST00000446385.1 ENST00000453350.1 ENST00000454454.5 ENST00000454620.1 ENST00000680530.1 ENST00000681421.1 |
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| CDS CCA 72 bp | TGCTCTGGATATGTGCAGCGGGTCCCAAGTGCTCGGTaGGCGGATGGAGGTCGACCACACTTCGATAAGCGC | + |
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Preference number: 6 (lower is better) Translates to: CSGYVQRVPSAR*ADGGRPHFDKR Trigger: GCGCTTATCGAAGTGTGGTCGACCTCCATCCGCCCACCGAGCACTTGGGACCCGCTGCACATATCCAGAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 26 transcripts: ENST00000330914.7 ENST00000396384.1 ENST00000396389.5 ENST00000400530.1 ENST00000400531.5 ENST00000400534.5 ENST00000412136.5 ENST00000413547.5 ENST00000419551.5 ENST00000420400.5 ENST00000420618.1 ENST00000424734.5 ENST00000425102.1 ENST00000425136.5 ENST00000426754.5 ENST00000427480.5 ENST00000435546.5 ENST00000436335.5 ENST00000437490.5 ENST00000444441.1 ENST00000446385.1 ENST00000453350.1 ENST00000454454.5 ENST00000454620.1 ENST00000680530.1 ENST00000681421.1 |
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| CDS CCA 72 bp | GATCAGAGACTTGTCATTCCAGGTCCCGCCACCAGGTaGCAGCAGACGTCTTTGGCCCCGACGGTGGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: DQRLVIPGPATR*QQTSLAPTVVH Trigger: GTGAACCACCGTCGGGGCCAAAGACGTCTGCTGCCACCTGGTGGCGGGACCTGGAATGACAAGTCTCTGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681421.1 |
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| CDS CAA 72 bp | CGGGAAGTGGGTGGTGGGCGGGCAAGCGGTAGTGGGTaGTCCCTTGGAGCTGCCCAATCGACGTGCATTATT | + |
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Preference number: 6 (lower is better) Translates to: REVGGGRASGSG*SLGAAQSTCII Trigger: AATAATGCACGTCGATTGGGCAGCTCCAAGGGACAACCCACTACCGCTTGCCCGCCCACCACCCACTTCCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS CAA 72 bp | TGGGTGGTGGGCGGGCAAGCGGTAGTGGGTTGTCCCTaGGAGCTGCCCAATCGACGTGCATTATTCTGTTGG | + |
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Preference number: 6 (lower is better) Translates to: WVVGGQAVVGCP*ELPNRRALFCW Trigger: CCAACAGAATAATGCACGTCGATTGGGCAGCTCCAAGGGACAACCCACTACCGCTTGCCCGCCCACCACCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS CAA 90 bp | AGACTTGTCATTCCAGGTCCCGCCACCAGGTGGCAGCAGACGTCTTaGGCCCCGACGGTGGTTCACGAAAGGGACAAAATGACAGATTCA | + |
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Preference number: 6 (lower is better) Translates to: RLVIPGPATRWQQTS*APTVVHERDKMTDS Trigger: TGAATCTGTCATTTTGTCCCTTTCGTGAACCACCGTCGGGGCCAAAGACGTCTGCTGCCACCTGGTGGCGGGACCTGGAATGACAAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000681421.1 |
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| CDS GCA 72 bp | GGTAGTGGGTTGTCCCTTGGAGCTGCCCAATCGACGTaGATTATTCTGTTGGCGCACGGCGGCCTTCAATTA | + |
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Preference number: 6 (lower is better) Translates to: GSGLSLGAAQST*IILLAHGGLQL Trigger: TAATTGAAGGCCGCCGTGCGCCAACAGAATAATGCACGTCGATTGGGCAGCTCCAAGGGACAACCCACTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS CCA 72 bp | CCCTTGGAGCTGCCCAATCGACGTGCATTATTCTGTTaGCGCACGGCGGCCTTCAATTACCGTCTCATTAAC | + |
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Preference number: 6 (lower is better) Translates to: PLELPNRRALFC*RTAAFNYRLIN Trigger: GTTAATGAGACGGTAATTGAAGGCCGCCGTGCGCCAACAGAATAATGCACGTCGATTGGGCAGCTCCAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681435.1 |
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| CDS CAA 72 bp | ATATACTGGAAATGGGAGACAGCAGGGATCAGAGACTaGTCATTCCAGGTCCCGCCACCAGGTGGCAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: IYWKWETAGIRD*SFQVPPPGGSR Trigger: TCTGCTGCCACCTGGTGGCGGGACCTGGAATGACAAGTCTCTGATCCCTGCTGTCTCCCATTTCCAGTATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681421.1 |
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| CDS CCA 72 bp | CAGATTCACCCAAAGGGGATAAGGCGTGCCCAGAAATaGAAAGAGATCCCAGATAAGTGGGAGACAGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: QIHPKGIRRAQK*KEIPDKWETGK Trigger: CTTCCCTGTCTCCCACTTATCTGGGATCTCTTTCCATTTCTGGGCACGCCTTATCCCCTTTGGGTGAATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681421.1 |
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