RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TUBA8 (Homo sapiens)

Ensembl gene IDs: ENSG00000183785

Ensembl transcript IDs: ENST00000316027.10, ENST00000330423.8, ENST00000416740.2, ENST00000426208.5, ENST00000608634.1, ENST00000679481.1, ENST00000679963.1, ENST00000680175.1

Found 246 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGCCTGATGAAGCTCAGTGTCCACTTAGCCCAGTCGTGCCACCCTaGGTACTGGGGCCAGGCACCCTCCTCCTGGGTAAGGCAGGAATC +
Preference number: 1 (lower is better)
Translates to: GPDEAQCPLSPVVPP*VLGPGTLLLGKAGI
Trigger: GATTCCTGCCTTACCCAGGAGGAGGGTGCCTGGCCCCAGTACCCAGGGTGGCACGACTGGGCTAAGTGGACACTGAGCTTCATCAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
3UTR CCA 90 bp CATCGAAGGTCAGTAACCGGAACCCCTTCGCCAGGACGCGGGTCCTaGCCAACCCAAATCGAGGGGCATTCTGCAGATCAGCTGGTCTGC +
Preference number: 1 (lower is better)
Translates to: HRRSVTGTPSPGRGS*PTQIEGHSADQLVC
Trigger: GCAGACCAGCTGATCTGCAGAATGCCCCTCGATTTGGGTTGGCCAGGACCCGCGTCCTGGCGAAGGGGTTCCGGTTACTGACCTTCGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679963.1
3UTR GCA 90 bp CGTGCCACCAGAGGACAGAGTGGAGCCAGCGCGGTATCACTTCTGTaGTGTTCCCATCGAAGGTCAGTAACCGGAACCCCTTCGCCAGGA +
Preference number: 1 (lower is better)
Translates to: RATRGQSGASAVSLL*CSHRRSVTGTPSPG
Trigger: TCCTGGCGAAGGGGTTCCGGTTACTGACCTTCGATGGGAACAGCACAGAAGTGATACCGCGCTGGCTCCACTCTGTCCTCTGGTGGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679963.1
3UTR CCA 90 bp ATCAGTGCGGGGAACACTGGAATTGCGTGCCACCAGAGGACAGAGTaGAGCCAGCGCGGTATCACTTCTGTGCTGTTCCCATCGAAGGTC +
Preference number: 1 (lower is better)
Translates to: ISAGNTGIACHQRTE*SQRGITSVLFPSKV
Trigger: GACCTTCGATGGGAACAGCACAGAAGTGATACCGCGCTGGCTCCACTCTGTCCTCTGGTGGCACGCAATTCCAGTGTTCCCCGCACTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679963.1
3UTR GCA 90 bp ATTCGGTACAAGAAAGTCATCAGTGCGGGGAACACTGGAATTGCGTaGCACCAGAGGACAGAGTGGAGCCAGCGCGGTATCACTTCTGTG +
Preference number: 1 (lower is better)
Translates to: IRYKKVISAGNTGIA*HQRTEWSQRGITSV
Trigger: CACAGAAGTGATACCGCGCTGGCTCCACTCTGTCCTCTGGTGGCACGCAATTCCAGTGTTCCCCGCACTGATGACTTTCTTGTACCGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679963.1
3UTR TCA 90 bp CTCTCCAGCTCTCAGTGCCTAGGACAGGGTGTGTATTGGAATATGTaGTGGGGGAGTGAATGCATGCTAAGTCTAGATGATGCCCGGAGC +
Preference number: 1 (lower is better)
Translates to: LSSSQCLGQGVYWNM*WGSECMLSLDDARS
Trigger: GCTCCGGGCATCATCTAGACTTAGCATGCATTCACTCCCCCATCACATATTCCAATACACACCCTGTCCTAGGCACTGAGAGCTGGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
3UTR GCA 90 bp AAATATTCGGTACAAGAAAGTCATCAGTGCGGGGAACACTGGAATTaGGTGCCACCAGAGGACAGAGTGGAGCCAGCGCGGTATCACTTC +
Preference number: 1 (lower is better)
Translates to: KYSVQESHQCGEHWN*VPPEDRVEPARYHF
Trigger: GAAGTGATACCGCGCTGGCTCCACTCTGTCCTCTGGTGGCACGCAATTCCAGTGTTCCCCGCACTGATGACTTTCTTGTACCGAATATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679963.1
3UTR TCA 90 bp TTTGTTTGCACAAGCCTACTTGAAAGCTCACGGTCTCAACTGGTTTaGACTAGGCAGGAGCTGCCCCAAGTTCCTGAAAAACAATTTGAA +
Preference number: 1 (lower is better)
Translates to: FVCTSLLESSRSQLV*TRQELPQVPEKQFE
Trigger: TTCAAATTGTTTTTCAGGAACTTGGGGCAGCTCCTGCCTAGTTCAAACCAGTTGAGACCGTGAGCTTTCAAGTAGGCTTGTGCAAACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
3UTR-3UTR CCA 90 bp ACCCACTCATGTGAACGTCCGCTCACCCCTGCCCCGGAATCTTCCCAGGCCCAGCCAGTCGTGCCACCCTaGGTACTGGGGCCAGGCACC +
Preference number: 2 (lower is better)
Translates to: THSCERPLTPAPESSQAQPVVPP*VLGPGT
Trigger: GGTGCCTGGCCCCAGTACCCAGGGTGGCACGACTGG...CTGGGCCTGGGAAGATTCCGGGGCAGGGGTGAGCGGACGTTCACATGAGTGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
3UTR-3UTR GCA 90 bp ACCCACTCATGTGAACGTCCGCTCACCCCTGCCCCGGAATCTTCCCAGGCCCAGCACTTAGCCCAGTCGTaGCACCCTGGGTACTGGGGC +
Preference number: 2 (lower is better)
Translates to: THSCERPLTPAPESSQAQHLAQS*HPGYWG
Trigger: GCCCCAGTACCCAGGGTGGCACGACTGGGCTAAGTG...CTGGGCCTGGGAAGATTCCGGGGCAGGGGTGAGCGGACGTTCACATGAGTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
3UTR-3UTR GCA 90 bp TCATGTGAACGTCCGCTCACCCCTGCCCCGGAATCTTCCCAGGCCCAGATCTCCCATGTGAAACTGGGCTaGAGCCTCACCCGCCGGAGA +
Preference number: 2 (lower is better)
Translates to: SCERPLTPAPESSQAQISHVKLG*SLTRRR
Trigger: TCTCCGGCGGGTGAGGCTGCAGCCCAGTTTCACATG...GGAGATCTGGGCCTGGGAAGATTCCGGGGCAGGGGTGAGCGGACGTTCACATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
3UTR-3UTR CCA 90 bp CCCAGGGAGGGCCTGATGAAGCTCAGTGTCCACTTAGCCCAGTCGTGCCACCCTCAGGCACCCTCCTCCTaGGTAAGGCAGGAATCAGGC +
Preference number: 2 (lower is better)
Translates to: PREGLMKLSVHLAQSCHPQAPSS*VRQESG
Trigger: GCCTGATTCCTGCCTTACCCAGGAGGAGGGTGCCTG...AGGGTGGCACGACTGGGCTAAGTGGACACTGAGCTTCATCAGGCCCTCCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
3UTR-3UTR GCA 90 bp CACCCGACCCAGAAGCCCAGCTGGCTTTGCCTCTCAGTACCACTGCTCTCCAGCGCTCACTGCCACCTCTaGCTCCCGAGTTCAAGCGAT +
Preference number: 2 (lower is better)
Translates to: HPTQKPSWLCLSVPLLSSAHCHL*LPSSSD
Trigger: ATCGCTTGAACTCGGGAGGCAGAGGTGGCAGTGAGC...GCTGGAGAGCAGTGGTACTGAGAGGCAAAGCCAGCTGGGCTTCTGGGTCGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680175.1
3UTR-3UTR CCA 90 bp TCATGTGAACGTCCGCTCACCCCTGCCCCGGAATCTTCCCAGGCCCAGATCTCCACCCGCCGGAGACAGTaGCCCTCACTTTCTTTAGTG +
Preference number: 2 (lower is better)
Translates to: SCERPLTPAPESSQAQISTRRRQ*PSLSLV
Trigger: CACTAAAGAAAGTGAGGGCCACTGTCTCCGGCGGGT...GGAGATCTGGGCCTGGGAAGATTCCGGGGCAGGGGTGAGCGGACGTTCACATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
3UTR-3UTR CCA 90 bp GCAAGGCAGCCCAGTGAGGAGGCAGGAGAACAGCTCTCAAATCTTCCTCCCCAACACCAGAGGACAGAGTaGAGCCAGCGCGGTATCACT +
Preference number: 2 (lower is better)
Translates to: ARQPSEEAGEQLSNLPPQHQRTE*SQRGIT
Trigger: AGTGATACCGCGCTGGCTCCACTCTGTCCTCTGGTG...TTGGGGAGGAAGATTTGAGAGCTGTTCTCCTGCCTCCTCACTGGGCTGCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679963.1
3UTR-3UTR CCA 90 bp CACCCGACCCAGAAGCCCAGCTGGCTTTGCCTCTCAGTACCACTGCTCTCCAGCAGGGTTTCACTGCGTTaGCCAGGATGGTCTCAATCT +
Preference number: 2 (lower is better)
Translates to: HPTQKPSWLCLSVPLLSSRVSLR*PGWSQS
Trigger: AGATTGAGACCATCCTGGCCAACGCAGTGAAACCCT...GCTGGAGAGCAGTGGTACTGAGAGGCAAAGCCAGCTGGGCTTCTGGGTCGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680175.1
3UTR-3UTR TCA 90 bp AGCCCAGTGAGGAGGCAGGAGAACAGCTCTCAAATCTTCCTCCCCAAAGATAAGCGCAAGGCAGCCCAGTaGGGAGGCAGGAGAACAGCT +
Preference number: 2 (lower is better)
Translates to: SPVRRQENSSQIFLPKDKRKAAQ*GGRRTA
Trigger: AGCTGTTCTCCTGCCTCCTCACTGGGCTGCCTTGCG...CTTATCTTTGGGGAGGAAGATTTGAGAGCTGTTCTCCTGCCTCCTCACTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
3UTR-3UTR TCA 90 bp ACCCACTCATGTGAACGTCCGCTCACCCCTGCCCCGGAATCTTCCCAGGCCCAGAGTGTTCTGTTCTCTTaGACATGTGCTTTGAATGGC +
Preference number: 2 (lower is better)
Translates to: THSCERPLTPAPESSQAQSVLFS*TCALNG
Trigger: GCCATTCAAAGCACATGTTCAAGAGAACAGAACACT...CTGGGCCTGGGAAGATTCCGGGGCAGGGGTGAGCGGACGTTCACATGAGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
3UTR-3UTR TCA 90 bp GCAGTGGGGGAAAATGAGGCAGTCGGTGACCACTGCAAGCATAGTCAGGGTTCGGCAGACCTAATCAGATaGACCCCATGGTCTCATATG +
Preference number: 2 (lower is better)
Translates to: AVGENEAVGDHCKHSQGSADLIR*TPWSHM
Trigger: CATATGAGACCATGGGGTTCATCTGATTAGGTCTGC...CGAACCCTGACTATGCTTGCAGTGGTCACCGACTGCCTCATTTTCCCCCACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
3UTR-3UTR TCA 90 bp CAGTGGGGGAAAATGAGGCAGTCGGTGACCACTGCAAGCATAGTCAGGGTTCGTGCAGACCTAATCAGATaGACCCCATGGTCTCATATG +
Preference number: 2 (lower is better)
Translates to: QWGKMRQSVTTASIVRVRADLIR*TPWSHM
Trigger: CATATGAGACCATGGGGTTCATCTGATTAGGTCTGC...ACGAACCCTGACTATGCTTGCAGTGGTCACCGACTGCCTCATTTTCCCCCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
3UTR-3UTR CCA 90 bp AGCCCAGTGAGGAGGCAGGAGAACAGCTCTCAAATCTTCCTCCCCAAAGATAAGAAAGGTGATTGGCAGTaGGGGAAAATGAGGCAGTCG +
Preference number: 2 (lower is better)
Translates to: SPVRRQENSSQIFLPKDKKGDWQ*GKMRQS
Trigger: CGACTGCCTCATTTTCCCCCACTGCCAATCACCTTT...CTTATCTTTGGGGAGGAAGATTTGAGAGCTGTTCTCCTGCCTCCTCACTGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
3UTR CAA 90 bp CTGAGGGTGTCGCTTGGGGCCTCTGATGTCAAAAGGCCACTTCTTTaGTTTGCACAAGCCTACTTGAAAGCTCACGGTCTCAACTGGTTT +
Preference number: 2 (lower is better)
Translates to: LRVSLGASDVKRPLL*FAQAYLKAHGLNWF
Trigger: AAACCAGTTGAGACCGTGAGCTTTCAAGTAGGCTTGTGCAAACAAAAGAAGTGGCCTTTTGACATCAGAGGCCCCAAGCGACACCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
3UTR-3UTR TCA 90 bp GACACAAAGCTGCTCCTACCCAGGGAGGGCCTGATGAAGCTCAGTGTCCACTTAAGTGTTCTGTTCTCTTaGACATGTGCTTTGAATGGC +
Preference number: 2 (lower is better)
Translates to: DTKLLLPREGLMKLSVHLSVLFS*TCALNG
Trigger: GCCATTCAAAGCACATGTTCAAGAGAACAGAACACT...TAAGTGGACACTGAGCTTCATCAGGCCCTCCCTGGGTAGGAGCAGCTTTGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
3UTR-3UTR TCA 90 bp CCACTTCTTTTGTTTGCACAAGCCTACTTGAAAGCTCACGGTCTCAACTGGTTTCGGTCTCAACTGGTTTaGACTAGGCAGGAGCTGCCC +
Preference number: 2 (lower is better)
Translates to: PLLLFAQAYLKAHGLNWFRSQLV*TRQELP
Trigger: GGGCAGCTCCTGCCTAGTTCAAACCAGTTGAGACCG...AAACCAGTTGAGACCGTGAGCTTTCAAGTAGGCTTGTGCAAACAAAAGAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
3UTR-3UTR CCA 90 bp GACACAAAGCTGCTCCTACCCAGGGAGGGCCTGATGAAGCTCAGTGTCCACTTAAACATGTGCTTTGAATaGCACAGCATAAATAAAGAG +
Preference number: 2 (lower is better)
Translates to: DTKLLLPREGLMKLSVHLNMCFE*HSINKE
Trigger: CTCTTTATTTATGCTGTGCCATTCAAAGCACATGTT...TAAGTGGACACTGAGCTTCATCAGGCCCTCCCTGGGTAGGAGCAGCTTTGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
3UTR-3UTR CCA 90 bp CCACTTCTTTTGTTTGCACAAGCCTACTTGAAAGCTCACGGTCTCAACTGGTTTATGGGCAAAGGTGATTaGCAGTGGGGGAAAATGAGG +
Preference number: 2 (lower is better)
Translates to: PLLLFAQAYLKAHGLNWFMGKGD*QWGKMR
Trigger: CCTCATTTTCCCCCACTGCCAATCACCTTTGCCCAT...AAACCAGTTGAGACCGTGAGCTTTCAAGTAGGCTTGTGCAAACAAAAGAAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
3UTR-3UTR CCA 90 bp CCACTTCTTTTGTTTGCACAAGCCTACTTGAAAGCTCACGGTCTCAACTGGTTTGGGTGGTGTAAGGTATaGGCAAAGGTGATTGGCAGT +
Preference number: 2 (lower is better)
Translates to: PLLLFAQAYLKAHGLNWFGWCKV*AKVIGS
Trigger: ACTGCCAATCACCTTTGCCCATACCTTACACCACCC...AAACCAGTTGAGACCGTGAGCTTTCAAGTAGGCTTGTGCAAACAAAAGAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
3UTR-3UTR GCA 90 bp TCTGATGTCAAAAGGCCACTTCTTTTGTTTGCACAAGCCTACTTGAAAGCTCACGCCACTTCTTTTGTTTaGACAAGCCTACTTGAAAGC +
Preference number: 2 (lower is better)
Translates to: SDVKRPLLLFAQAYLKAHATSFV*TSLLES
Trigger: GCTTTCAAGTAGGCTTGTGCAAACAAAAGAAGTGGC...GTGAGCTTTCAAGTAGGCTTGTGCAAACAAAAGAAGTGGCCTTTTGACATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
3UTR CAA 90 bp TGGTTTGAACTAGGCAGGAGCTGCCCCAAGTTCCTGAAAAACAATTaGAACGATCATGACAGTAGTGACATACATGTTATCTGTAAGGAA +
Preference number: 2 (lower is better)
Translates to: WFELGRSCPKFLKNN*NDHDSSDIHVICKE
Trigger: TTCCTTACAGATAACATGTATGTCACTACTGTCATGATCGTTCAAATTGTTTTTCAGGAACTTGGGGCAGCTCCTGCCTAGTTCAAACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
3UTR-3UTR CAA 90 bp TCATGTGAACGTCCGCTCACCCCTGCCCCGGAATCTTCCCAGGCCCAGATCTCCCCAGCAGGCCATGTTTaGGGGCTGGACCCAGCCCGA +
Preference number: 3 (lower is better)
Translates to: SCERPLTPAPESSQAQISPAGHV*GLDPAR
Trigger: TCGGGCTGGGTCCAGCCCCAAAACATGGCCTGCTGG...GGAGATCTGGGCCTGGGAAGATTCCGGGGCAGGGGTGAGCGGACGTTCACATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
3UTR CCA 72 bp GAAGCTCAGTGTCCACTTAGCCCAGTCGTGCCACCCTaGGTACTGGGGCCAGGCACCCTCCTCCTGGGTAAG +
Preference number: 3 (lower is better)
Translates to: EAQCPLSPVVPP*VLGPGTLLLGK
Trigger: CTTACCCAGGAGGAGGGTGCCTGGCCCCAGTACCCAGGGTGGCACGACTGGGCTAAGTGGACACTGAGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
3UTR-3UTR CAA 90 bp CACCCGACCCAGAAGCCCAGCTGGCTTTGCCTCTCAGTACCACTGCTCTCCAGCTGGAGTCTCGCTCTTTaGTCAGGCTGGAGTGCAGTG +
Preference number: 3 (lower is better)
Translates to: HPTQKPSWLCLSVPLLSSWSLAL*SGWSAV
Trigger: CACTGCACTCCAGCCTGACAAAAGAGCGAGACTCCA...GCTGGAGAGCAGTGGTACTGAGAGGCAAAGCCAGCTGGGCTTCTGGGTCGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680175.1
3UTR-3UTR CAA 90 bp GGTATGGGCAAAGGTGATTGGCAGTGGGGGAAAATGAGGCAGTCGGTGACCACTCGGGGAACACTGGAATaGCGTGCCACCAGAGGACAG +
Preference number: 3 (lower is better)
Translates to: GMGKGDWQWGKMRQSVTTRGTLE*RATRGQ
Trigger: CTGTCCTCTGGTGGCACGCAATTCCAGTGTTCCCCG...AGTGGTCACCGACTGCCTCATTTTCCCCCACTGCCAATCACCTTTGCCCATACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000679963.1
3UTR CCA 72 bp GGGAACACTGGAATTGCGTGCCACCAGAGGACAGAGTaGAGCCAGCGCGGTATCACTTCTGTGCTGTTCCCA +
Preference number: 3 (lower is better)
Translates to: GNTGIACHQRTE*SQRGITSVLFP
Trigger: TGGGAACAGCACAGAAGTGATACCGCGCTGGCTCCACTCTGTCCTCTGGTGGCACGCAATTCCAGTGTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679963.1
3UTR TCA 72 bp CTGGAATTGAAACTCCTGATTAGGCCTCCTCGCATGTaGAACTGGGCTGCAGCCTCACCCGCCGGAGACAGT +
Preference number: 3 (lower is better)
Translates to: LELKLLIRPPRM*NWAAASPAGDS
Trigger: ACTGTCTCCGGCGGGTGAGGCTGCAGCCCAGTTTCACATGCGAGGAGGCCTAATCAGGAGTTTCAATTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
3UTR GCA 72 bp TTGGCAGTGGGGGAAAATGAGGCAGTCGGTGACCACTaGAAGCATAGTCAGGGTTCGTGGCACTTCACAGGG +
Preference number: 3 (lower is better)
Translates to: LAVGENEAVGDH*KHSQGSWHFTG
Trigger: CCCTGTGAAGTGCCACGAACCCTGACTATGCTTGCAGTGGTCACCGACTGCCTCATTTTCCCCCACTGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
3UTR GCA 72 bp ACGCGGGTCCTGGCCAACCCAAATCGAGGGGCATTCTaGAGATCAGCTGGTCTGCCATCTTCAAACGATTCA +
Preference number: 3 (lower is better)
Translates to: TRVLANPNRGAF*RSAGLPSSNDS
Trigger: TGAATCGTTTGAAGATGGCAGACCAGCTGATCTGCAGAATGCCCCTCGATTTGGGTTGGCCAGGACCCGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679963.1
3UTR CCA 72 bp TTTGCACAAGCCTACTTGAAAGCTCACGGTCTCAACTaGTTTGAACTAGGCAGGAGCTGCCCCAAGTTCCTG +
Preference number: 3 (lower is better)
Translates to: FAQAYLKAHGLN*FELGRSCPKFL
Trigger: CAGGAACTTGGGGCAGCTCCTGCCTAGTTCAAACCAGTTGAGACCGTGAGCTTTCAAGTAGGCTTGTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
3UTR-3UTR CAA 90 bp GGTATGGGCAAAGGTGATTGGCAGTGGGGGAAAATGAGGCAGTCGGTGACCACTAAAAGGCCACTTCTTTaGTTTGCACAAGCCTACTTG +
Preference number: 3 (lower is better)
Translates to: GMGKGDWQWGKMRQSVTTKRPLL*FAQAYL
Trigger: CAAGTAGGCTTGTGCAAACAAAAGAAGTGGCCTTTT...AGTGGTCACCGACTGCCTCATTTTCCCCCACTGCCAATCACCTTTGCCCATACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
3UTR-3UTR CAA 90 bp CAGTGGGGGAAAATGAGGCAGTCGGTGACCACTGCAAGCATAGTCAGGGTTCGTAAAAGGCCACTTCTTTaGTTTGCACAAGCCTACTTG +
Preference number: 3 (lower is better)
Translates to: QWGKMRQSVTTASIVRVRKRPLL*FAQAYL
Trigger: CAAGTAGGCTTGTGCAAACAAAAGAAGTGGCCTTTT...ACGAACCCTGACTATGCTTGCAGTGGTCACCGACTGCCTCATTTTCCCCCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
3UTR TCA 72 bp TCCTCCCCAAAGATAAGTCTTAGGGATATTTACCGGTaGGAGAAGCAGGGTGGTGTAAGGTATGGGCAAAGG +
Preference number: 3 (lower is better)
Translates to: SSPKISLRDIYR*EKQGGVRYGQR
Trigger: CCTTTGCCCATACCTTACACCACCCTGCTTCTCTCACCGGTAAATATCCCTAAGACTTATCTTTGGGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
3UTR-3UTR CAA 90 bp AGTAACCTGTGGGACTGTGATGAAAGATTTAACATCATGTCATCAAAGTCCCCCCAGGGTTTCACTGCGTaGGCCAGGATGGTCTCAATC +
Preference number: 3 (lower is better)
Translates to: SNLWDCDERFNIMSSKSPQGFTA*ARMVSI
Trigger: GATTGAGACCATCCTGGCCAACGCAGTGAAACCCTG...GGGGGACTTTGATGACATGATGTTAAATCTTTCATCACAGTCCCACAGGTTACT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000680175.1
3UTR TCA 72 bp GTAAAAGAGAAAAGATTTATTCGCAAGGCAGCCCAGTaGGGAGGCAGGAGAACAGCTCTCAAATCTTCCTCC +
Preference number: 3 (lower is better)
Translates to: VKEKRFIRKAAQ*GGRRTALKSSS
Trigger: GGAGGAAGATTTGAGAGCTGTTCTCCTGCCTCCTCACTGGGCTGCCTTGCGAATAAATCTTTTCTCTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
3UTR CCA 72 bp AGAGCGCCGATTGGTGCGTTTTTACAGAGTGCTGATTaGTGTGTTTACAAACCTTTAGCTAGTCACAGAGCG +
Preference number: 3 (lower is better)
Translates to: RAPIGAFLQSAD*CVYKPLASHRA
Trigger: CGCTCTGTGACTAGCTAAAGGTTTGTAAACACACCAATCAGCACTCTGTAAAAACGCACCAATCGGCGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680175.1
3UTR TCA 72 bp TCTCAGTGCCTAGGACAGGGTGTGTATTGGAATATGTaGTGGGGGAGTGAATGCATGCTAAGTCTAGATGAT +
Preference number: 3 (lower is better)
Translates to: SQCLGQGVYWNM*WGSECMLSLDD
Trigger: ATCATCTAGACTTAGCATGCATTCACTCCCCCATCACATATTCCAATACACACCCTGTCCTAGGCACTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
3UTR CCA 72 bp GGAGAGTGTTCTGTTCTCTTGAACATGTGCTTTGAATaGCACAGCATAAATAAAGAGACACAGCCAAGGGGA +
Preference number: 3 (lower is better)
Translates to: GECSVLLNMCFE*HSINKETQPRG
Trigger: TCCCCTTGGCTGTGTCTCTTTATTTATGCTGTGCCATTCAAAGCACATGTTCAAGAGAACAGAACACTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR GCA 90 bp CACCCGACCCAGAAGCCCAGCTGGCTTTGCCTCTCAGTACCACTGCTCTCCAGCGCCCGGGTGCCAAGGTaGCGTCTCAGCTGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: HPTQKPSWLCLSVPLLSSARVPR*RLSWAP
Trigger: GGGCGCCCAGCTGAGACGGCACCTTGGCACCCGGGC...GCTGGAGAGCAGTGGTACTGAGAGGCAAAGCCAGCTGGGCTTCTGGGTCGGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR CCA 90 bp CACCCGACCCAGAAGCCCAGCTGGCTTTGCCTCTCAGTACCACTGCTCTCCAGCCGCGCACCTCTCAGCTaGGCCTGCCCGCCCCGACTG +
Preference number: 4 (lower is better)
Translates to: HPTQKPSWLCLSVPLLSSRAPLS*ACPPRL
Trigger: CAGTCGGGGCGGGCAGGCCCAGCTGAGAGGTGCGCG...GCTGGAGAGCAGTGGTACTGAGAGGCAAAGCCAGCTGGGCTTCTGGGTCGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR GCA 90 bp CCCGGAGCGGGCTATAGACCCACTCATGTGAACGTCCGCTCACCCCTGCCCCGGACGGCCCGGGGCACATaGTTCCCATTGCCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: PGAGYRPTHVNVRSPLPRTARGT*FPLPVS
Trigger: CGAGACTGGCAATGGGAAGCATGTGCCCCGGGCCGT...CCGGGGCAGGGGTGAGCGGACGTTCACATGAGTGGGTCTATAGCCCGCTCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR GCA 90 bp CCCAGGGAGGGCCTGATGAAGCTCAGTGTCCACTTAGCCCAGTCGTGCCACCCTCTCTGCCCCAGCCGCTaGCCTGTGAGCCAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: PREGLMKLSVHLAQSCHPLCPSR*PVSQGP
Trigger: GGGGCCTTGGCTCACAGGGCAGCGGCTGGGGCAGAG...AGGGTGGCACGACTGGGCTAAGTGGACACTGAGCTTCATCAGGCCCTCCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416740.2
CDS-3UTR GCA 90 bp CCCGGAGCGGGCTATAGACCCACTCATGTGAACGTCCGCTCACCCCTGCCCCGGCATGTGAAACTGGGCTaGAGCCTCACCCGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: PGAGYRPTHVNVRSPLPRHVKLG*SLTRRR
Trigger: TCTCCGGCGGGTGAGGCTGCAGCCCAGTTTCACATG...CCGGGGCAGGGGTGAGCGGACGTTCACATGAGTGGGTCTATAGCCCGCTCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR CCA 90 bp CCCGGAGCGGGCTATAGACCCACTCATGTGAACGTCCGCTCACCCCTGCCCCGGCAGGCACCCTCCTCCTaGGTAAGGCAGGAATCAGGC +
Preference number: 4 (lower is better)
Translates to: PGAGYRPTHVNVRSPLPRQAPSS*VRQESG
Trigger: GCCTGATTCCTGCCTTACCCAGGAGGAGGGTGCCTG...CCGGGGCAGGGGTGAGCGGACGTTCACATGAGTGGGTCTATAGCCCGCTCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR CCA 90 bp CCCAGGGAGGGCCTGATGAAGCTCAGTGTCCACTTAGCCCAGTCGTGCCACCCTCCAGTCGTGCCACCCTaGGTACTGGGGCCAGGCACC +
Preference number: 4 (lower is better)
Translates to: PREGLMKLSVHLAQSCHPPVVPP*VLGPGT
Trigger: GGTGCCTGGCCCCAGTACCCAGGGTGGCACGACTGG...AGGGTGGCACGACTGGGCTAAGTGGACACTGAGCTTCATCAGGCCCTCCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR TCA 90 bp CCCGGAGCGGGCTATAGACCCACTCATGTGAACGTCCGCTCACCCCTGCCCCGGATAGACCCACTCATGTaGACGTCCGCTCACCCCTGC +
Preference number: 4 (lower is better)
Translates to: PGAGYRPTHVNVRSPLPRIDPLM*TSAHPC
Trigger: GCAGGGGTGAGCGGACGTTCACATGAGTGGGTCTAT...CCGGGGCAGGGGTGAGCGGACGTTCACATGAGTGGGTCTATAGCCCGCTCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR GCA 90 bp CACCCGACCCAGAAGCCCAGCTGGCTTTGCCTCTCAGTACCACTGCTCTCCAGCGCCCGCGGGGGAGGCTaGCCTATTACCAAAGCGCAC +
Preference number: 4 (lower is better)
Translates to: HPTQKPSWLCLSVPLLSSARGGG*PITKAH
Trigger: GTGCGCTTTGGTAATAGGGCAGCCTCCCCCGCGGGC...GCTGGAGAGCAGTGGTACTGAGAGGCAAAGCCAGCTGGGCTTCTGGGTCGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR CCA 90 bp CCCGGAGCGGGCTATAGACCCACTCATGTGAACGTCCGCTCACCCCTGCCCCGGGCCATGTTTTGGGGCTaGACCCAGCCCGATCTGGAA +
Preference number: 4 (lower is better)
Translates to: PGAGYRPTHVNVRSPLPRAMFWG*TQPDLE
Trigger: TTCCAGATCGGGCTGGGTCCAGCCCCAAAACATGGC...CCGGGGCAGGGGTGAGCGGACGTTCACATGAGTGGGTCTATAGCCCGCTCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR TCA 90 bp CACCCGACCCAGAAGCCCAGCTGGCTTTGCCTCTCAGTACCACTGCTCTCCAGCCGAGAGCAGCCTTCGTaGCCCCAGCTGCCGGAGAAA +
Preference number: 4 (lower is better)
Translates to: HPTQKPSWLCLSVPLLSSREQPS*PQLPEK
Trigger: TTTCTCCGGCAGCTGGGGTCACGAAGGCTGCTCTCG...GCTGGAGAGCAGTGGTACTGAGAGGCAAAGCCAGCTGGGCTTCTGGGTCGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR GCA 90 bp ACCCACTCATGTGAACGTCCGCTCACCCCTGCCCCGGAATCTTCCCAGGCCCAGGGTCAATGCTCTCCTTaGCCACCGTGTAGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: THSCERPLTPAPESSQAQGQCSP*PPCSGP
Trigger: GGGGCCACTACACGGTGGGCAAGGAGAGCATTGACC...CTGGGCCTGGGAAGATTCCGGGGCAGGGGTGAGCGGACGTTCACATGAGTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR GCA 90 bp CCCGGAGCGGGCTATAGACCCACTCATGTGAACGTCCGCTCACCCCTGCCCCGGCTGTCAGCTTCCGTATaGGGTCCAGCACCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: PGAGYRPTHVNVRSPLPRLSASV*GPAPGQ
Trigger: TTGACCTGGTGCTGGACCGCATACGGAAGCTGACAG...CCGGGGCAGGGGTGAGCGGACGTTCACATGAGTGGGTCTATAGCCCGCTCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR GCA 90 bp CCCAGGGAGGGCCTGATGAAGCTCAGTGTCCACTTAGCCCAGTCGTGCCACCCTCACTTAGCCCAGTCGTaGCACCCTGGGTACTGGGGC +
Preference number: 4 (lower is better)
Translates to: PREGLMKLSVHLAQSCHPHLAQS*HPGYWG
Trigger: GCCCCAGTACCCAGGGTGGCACGACTGGGCTAAGTG...AGGGTGGCACGACTGGGCTAAGTGGACACTGAGCTTCATCAGGCCCTCCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR CCA 90 bp ACCCACTCATGTGAACGTCCGCTCACCCCTGCCCCGGAATCTTCCCAGGCCCAGCCCGCTTGGCCCACGTaGACTGATATGCATTCCCGC +
Preference number: 4 (lower is better)
Translates to: THSCERPLTPAPESSQAQPAWPT*TDMHSR
Trigger: GCGGGAATGCATATCAGTCCACGTGGGCCAAGCGGG...CTGGGCCTGGGAAGATTCCGGGGCAGGGGTGAGCGGACGTTCACATGAGTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR CCA 90 bp ACCCACTCATGTGAACGTCCGCTCACCCCTGCCCCGGAATCTTCCCAGGCCCAGCGACATTCACATCCTTaGGCACCACGTCGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: THSCERPLTPAPESSQAQRHSHP*APRRPG
Trigger: ACCGGGGCGACGTGGTGCCCAAGGATGTGAATGTCG...CTGGGCCTGGGAAGATTCCGGGGCAGGGGTGAGCGGACGTTCACATGAGTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR CCA 90 bp CACCCGACCCAGAAGCCCAGCTGGCTTTGCCTCTCAGTACCACTGCTCTCCAGCAGGGCCGTGTGTGCTTaGCAAGCTGCAGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: HPTQKPSWLCLSVPLLSSRAVCA*QAAGPL
Trigger: CAGAGGCCCTGCAGCTTGCCAAGCACACACGGCCCT...GCTGGAGAGCAGTGGTACTGAGAGGCAAAGCCAGCTGGGCTTCTGGGTCGGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR TCA 90 bp ACCCACTCATGTGAACGTCCGCTCACCCCTGCCCCGGAATCTTCCCAGGCCCAGTTGGCCCACGTGGACTaGTATGCATTCCCGCATCGC +
Preference number: 4 (lower is better)
Translates to: THSCERPLTPAPESSQAQLAHVD*YAFPHR
Trigger: GCGATGCGGGAATGCATATCAGTCCACGTGGGCCAA...CTGGGCCTGGGAAGATTCCGGGGCAGGGGTGAGCGGACGTTCACATGAGTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330423.8
CDS-3UTR TCA 90 bp TCATGTGAACGTCCGCTCACCCCTGCCCCGGAATCTTCCCAGGCCCAGATCTCCAGGCCTCCTCGCATGTaGAACTGGGCTGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SCERPLTPAPESSQAQISRPPRM*NWAAAS
Trigger: TGAGGCTGCAGCCCAGTTTCACATGCGAGGAGGCCT...GGAGATCTGGGCCTGGGAAGATTCCGGGGCAGGGGTGAGCGGACGTTCACATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR GCA 90 bp ACCCACTCATGTGAACGTCCGCTCACCCCTGCCCCGGAATCTTCCCAGGCCCAGCTGGCGGTAGGTTCCTaGCCGAACCTCATCCACTAC +
Preference number: 4 (lower is better)
Translates to: THSCERPLTPAPESSQAQLAVGS*PNLIHY
Trigger: GTAGTGGATGAGGTTCGGGCAGGAACCTACCGCCAG...CTGGGCCTGGGAAGATTCCGGGGCAGGGGTGAGCGGACGTTCACATGAGTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR GCA 90 bp CACCCGACCCAGAAGCCCAGCTGGCTTTGCCTCTCAGTACCACTGCTCTCCAGCGGTCAATGCTCTCCTTaGCCACCGTGTAGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: HPTQKPSWLCLSVPLLSSGQCSP*PPCSGP
Trigger: GGGGCCACTACACGGTGGGCAAGGAGAGCATTGACC...GCTGGAGAGCAGTGGTACTGAGAGGCAAAGCCAGCTGGGCTTCTGGGTCGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR GCA 90 bp ACCCACTCATGTGAACGTCCGCTCACCCCTGCCCCGGAATCTTCCCAGGCCCAGCCAGCACCAGGTCAATaGTCTCCTTGCCCACCGTGT +
Preference number: 4 (lower is better)
Translates to: THSCERPLTPAPESSQAQPAPGQ*SPCPPC
Trigger: ACACGGTGGGCAAGGAGAGCATTGACCTGGTGCTGG...CTGGGCCTGGGAAGATTCCGGGGCAGGGGTGAGCGGACGTTCACATGAGTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR CCA 90 bp AGGCTGGGGCGGGGAGAGTGTTCTGTTCTCTTGAACATGTGCTTTGAATGGCACCGCGCACCTCTCAGCTaGGCCTGCCCGCCCCGACTG +
Preference number: 4 (lower is better)
Translates to: RLGRGECSVLLNMCFEWHRAPLS*ACPPRL
Trigger: CAGTCGGGGCGGGCAGGCCCAGCTGAGAGGTGCGCG...GTGCCATTCAAAGCACATGTTCAAGAGAACAGAACACTCTCCCCGCCCCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330423.8
CDS-3UTR CCA 90 bp CCCAGGGAGGGCCTGATGAAGCTCAGTGTCCACTTAGCCCAGTCGTGCCACCCTCCCGCTTGGCCCACGTaGACTGATATGCATTCCCGC +
Preference number: 4 (lower is better)
Translates to: PREGLMKLSVHLAQSCHPPAWPT*TDMHSR
Trigger: GCGGGAATGCATATCAGTCCACGTGGGCCAAGCGGG...AGGGTGGCACGACTGGGCTAAGTGGACACTGAGCTTCATCAGGCCCTCCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR CCA 90 bp TCATGTGAACGTCCGCTCACCCCTGCCCCGGAATCTTCCCAGGCCCAGATCTCCCGACATTCACATCCTTaGGCACCACGTCGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: SCERPLTPAPESSQAQISRHSHP*APRRPG
Trigger: ACCGGGGCGACGTGGTGCCCAAGGATGTGAATGTCG...GGAGATCTGGGCCTGGGAAGATTCCGGGGCAGGGGTGAGCGGACGTTCACATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR CCA 90 bp TCATGTGAACGTCCGCTCACCCCTGCCCCGGAATCTTCCCAGGCCCAGATCTCCCAGCAGGCCATGTTTTaGGGCTGGACCCAGCCCGAT +
Preference number: 4 (lower is better)
Translates to: SCERPLTPAPESSQAQISQQAMF*GWTQPD
Trigger: ATCGGGCTGGGTCCAGCCCCAAAACATGGCCTGCTG...GGAGATCTGGGCCTGGGAAGATTCCGGGGCAGGGGTGAGCGGACGTTCACATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR TCA 90 bp CCCAGGGAGGGCCTGATGAAGCTCAGTGTCCACTTAGCCCAGTCGTGCCACCCTATAGACCCACTCATGTaGACGTCCGCTCACCCCTGC +
Preference number: 4 (lower is better)
Translates to: PREGLMKLSVHLAQSCHPIDPLM*TSAHPC
Trigger: GCAGGGGTGAGCGGACGTTCACATGAGTGGGTCTAT...AGGGTGGCACGACTGGGCTAAGTGGACACTGAGCTTCATCAGGCCCTCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR TCA 90 bp ACCCACTCATGTGAACGTCCGCTCACCCCTGCCCCGGAATCTTCCCAGGCCCAGTTGGCCCACGTGGACTaGTATGCATTCCCGCAATCC +
Preference number: 4 (lower is better)
Translates to: THSCERPLTPAPESSQAQLAHVD*YAFPQS
Trigger: GGATTGCGGGAATGCATATCAGTCCACGTGGGCCAA...CTGGGCCTGGGAAGATTCCGGGGCAGGGGTGAGCGGACGTTCACATGAGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416740.2
CDS-3UTR TCA 90 bp CACCCGACCCAGAAGCCCAGCTGGCTTTGCCTCTCAGTACCACTGCTCTCCAGCCTCCAGGTCCCCACCTaGTTAGCTAGACACAGAGCG +
Preference number: 4 (lower is better)
Translates to: HPTQKPSWLCLSVPLLSSLQVPT*LARHRA
Trigger: CGCTCTGTGTCTAGCTAATCAGGTGGGGACCTGGAG...GCTGGAGAGCAGTGGTACTGAGAGGCAAAGCCAGCTGGGCTTCTGGGTCGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR GCA 90 bp AGGCTGGGGCGGGGAGAGTGTTCTGTTCTCTTGAACATGTGCTTTGAATGGCACGCATTCCCGCATCGCTaGCGCTGTCCTCGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: RLGRGECSVLLNMCFEWHAFPHR*RCPRPR
Trigger: GCGCGGGCGAGGACAGCGGCAGCGATGCGGGAATGC...GTGCCATTCAAAGCACATGTTCAAGAGAACAGAACACTCTCCCCGCCCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330423.8
CDS-3UTR GCA 90 bp TCATGTGAACGTCCGCTCACCCCTGCCCCGGAATCTTCCCAGGCCCAGATCTCCCCACGTGGACTGATATaGATTCCCGCATCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SCERPLTPAPESSQAQISPRGLI*IPASLP
Trigger: CGGCAGCGATGCGGGAATGCATATCAGTCCACGTGG...GGAGATCTGGGCCTGGGAAGATTCCGGGGCAGGGGTGAGCGGACGTTCACATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330423.8
CDS-3UTR GCA 90 bp CACCCGACCCAGAAGCCCAGCTGGCTTTGCCTCTCAGTACCACTGCTCTCCAGCCCACGTGGACTGATATaGATTCCCGCATCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: HPTQKPSWLCLSVPLLSSPRGLI*IPASLP
Trigger: CGGCAGCGATGCGGGAATGCATATCAGTCCACGTGG...GCTGGAGAGCAGTGGTACTGAGAGGCAAAGCCAGCTGGGCTTCTGGGTCGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR GCA 90 bp TCATGTGAACGTCCGCTCACCCCTGCCCCGGAATCTTCCCAGGCCCAGATCTCCCCAGCACCAGGTCAATaGTCTCCTTGCCCACCGTGT +
Preference number: 4 (lower is better)
Translates to: SCERPLTPAPESSQAQISPAPGQ*SPCPPC
Trigger: ACACGGTGGGCAAGGAGAGCATTGACCTGGTGCTGG...GGAGATCTGGGCCTGGGAAGATTCCGGGGCAGGGGTGAGCGGACGTTCACATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR GCA 90 bp ACCCACTCATGTGAACGTCCGCTCACCCCTGCCCCGGAATCTTCCCAGGCCCAGCTGTCAGCTTCCGTATaGGGTCCAGCACCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: THSCERPLTPAPESSQAQLSASV*GPAPGQ
Trigger: TTGACCTGGTGCTGGACCGCATACGGAAGCTGACAG...CTGGGCCTGGGAAGATTCCGGGGCAGGGGTGAGCGGACGTTCACATGAGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR CCA 90 bp CGGGTCCTGGCCAACCCAAATCGAGGGGCATTCTGCAGATCAGCTGGTCTGCCACGACATTCACATCCTTaGGCACCACGTCGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: RVLANPNRGAFCRSAGLPRHSHP*APRRPG
Trigger: ACCGGGGCGACGTGGTGCCCAAGGATGTGAATGTCG...TGGCAGACCAGCTGATCTGCAGAATGCCCCTCGATTTGGGTTGGCCAGGACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR TCA 90 bp CAGAGGACAGAGTGGAGCCAGCGCGGTATCACTTCTGTGCTGTTCCCATCGAAGCGAGAGCAGCCTTCGTaGCCCCAGCTGCCGGAGAAA +
Preference number: 4 (lower is better)
Translates to: QRTEWSQRGITSVLFPSKREQPS*PQLPEK
Trigger: TTTCTCCGGCAGCTGGGGTCACGAAGGCTGCTCTCG...CTTCGATGGGAACAGCACAGAAGTGATACCGCGCTGGCTCCACTCTGTCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR GCA 90 bp ACCCACTCATGTGAACGTCCGCTCACCCCTGCCCCGGAATCTTCCCAGGCCCAGCTTGAGCATCAAAAGTaGCGTCTGCCTGGATGCCGT +
Preference number: 4 (lower is better)
Translates to: THSCERPLTPAPESSQAQLEHQK*RLPGCR
Trigger: ACGGCATCCAGGCAGACGGCACTTTTGATGCTCAAG...CTGGGCCTGGGAAGATTCCGGGGCAGGGGTGAGCGGACGTTCACATGAGTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR GCA 90 bp CAGAGGACAGAGTGGAGCCAGCGCGGTATCACTTCTGTGCTGTTCCCATCGAAGACGGCCCGGGGCACATaGTTCCCATTGCCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: QRTEWSQRGITSVLFPSKTARGT*FPLPVS
Trigger: CGAGACTGGCAATGGGAAGCATGTGCCCCGGGCCGT...CTTCGATGGGAACAGCACAGAAGTGATACCGCGCTGGCTCCACTCTGTCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR GCA 90 bp CACCCGACCCAGAAGCCCAGCTGGCTTTGCCTCTCAGTACCACTGCTCTCCAGCCTGTCAGCTTCCGTATaGGGTCCAGCACCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: HPTQKPSWLCLSVPLLSSLSASV*GPAPGQ
Trigger: TTGACCTGGTGCTGGACCGCATACGGAAGCTGACAG...GCTGGAGAGCAGTGGTACTGAGAGGCAAAGCCAGCTGGGCTTCTGGGTCGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR GCA 90 bp GACACAAAGCTGCTCCTACCCAGGGAGGGCCTGATGAAGCTCAGTGTCCACTTAACGTCCGCTCACCCCTaGCCCGGAATCTTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: DTKLLLPREGLMKLSVHLTSAHP*PGIFPG
Trigger: GCCTGGGAAGATTCCGGGGCAGGGGTGAGCGGACGT...TAAGTGGACACTGAGCTTCATCAGGCCCTCCCTGGGTAGGAGCAGCTTTGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR GCA 90 bp ACCCACTCATGTGAACGTCCGCTCACCCCTGCCCCGGAATCTTCCCAGGCCCAGCCACGTGGACTGATATaGATTCCCGCAATCCAGCAG +
Preference number: 4 (lower is better)
Translates to: THSCERPLTPAPESSQAQPRGLI*IPAIQQ
Trigger: CTGCTGGATTGCGGGAATGCATATCAGTCCACGTGG...CTGGGCCTGGGAAGATTCCGGGGCAGGGGTGAGCGGACGTTCACATGAGTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416740.2
CDS-3UTR GCA 90 bp GGCCAACCCAAATCGAGGGGCATTCTGCAGATCAGCTGGTCTGCCATCTTCAAATGCAGCGGGCCCGGGTaGCAAGGTGCCGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GQPKSRGILQISWSAIFKCSGPG*QGAVSA
Trigger: AGCTGAGACGGCACCTTGGCACCCGGGCCCGCTGCA...TTTGAAGATGGCAGACCAGCTGATCTGCAGAATGCCCCTCGATTTGGGTTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR GCA 90 bp CACCCGACCCAGAAGCCCAGCTGGCTTTGCCTCTCAGTACCACTGCTCTCCAGCAAGCCCAGCTGGCTTTaGCTCTCAGTACCACTGCTC +
Preference number: 4 (lower is better)
Translates to: HPTQKPSWLCLSVPLLSSKPSWL*LSVPLL
Trigger: GAGCAGTGGTACTGAGAGGCAAAGCCAGCTGGGCTT...GCTGGAGAGCAGTGGTACTGAGAGGCAAAGCCAGCTGGGCTTCTGGGTCGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR CCA 90 bp CCCAGGGAGGGCCTGATGAAGCTCAGTGTCCACTTAGCCCAGTCGTGCCACCCTACCCGCCGGAGACAGTaGCCCTCACTTTCTTTAGTG +
Preference number: 4 (lower is better)
Translates to: PREGLMKLSVHLAQSCHPTRRRQ*PSLSLV
Trigger: CACTAAAGAAAGTGAGGGCCACTGTCTCCGGCGGGT...AGGGTGGCACGACTGGGCTAAGTGGACACTGAGCTTCATCAGGCCCTCCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR TCA 90 bp TCATGTGAACGTCCGCTCACCCCTGCCCCGGAATCTTCCCAGGCCCAGATCTCCCATGCTAAGTCTAGATaGTGCCCGGAGCGGGCTATA +
Preference number: 4 (lower is better)
Translates to: SCERPLTPAPESSQAQISHAKSR*CPERAI
Trigger: TATAGCCCGCTCCGGGCATCATCTAGACTTAGCATG...GGAGATCTGGGCCTGGGAAGATTCCGGGGCAGGGGTGAGCGGACGTTCACATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR TCA 90 bp GGGTCCTGGCCAACCCAAATCGAGGGGCATTCTGCAGATCAGCTGGTCTGCCATCGGTCTCAACTGGTTTaGACTAGGCAGGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GSWPTQIEGHSADQLVCHRSQLV*TRQELP
Trigger: GGGCAGCTCCTGCCTAGTTCAAACCAGTTGAGACCG...ATGGCAGACCAGCTGATCTGCAGAATGCCCCTCGATTTGGGTTGGCCAGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR TCA 90 bp GATTGGCAGTGGGGGAAAATGAGGCAGTCGGTGACCACTGCAAGCATAGTCAGGCGCAAGGCAGCCCAGTaGGGAGGCAGGAGAACAGCT +
Preference number: 4 (lower is better)
Translates to: DWQWGKMRQSVTTASIVRRKAAQ*GGRRTA
Trigger: AGCTGTTCTCCTGCCTCCTCACTGGGCTGCCTTGCG...CCTGACTATGCTTGCAGTGGTCACCGACTGCCTCATTTTCCCCCACTGCCAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
CDS-3UTR TCA 90 bp CAGTGGGGGAAAATGAGGCAGTCGGTGACCACTGCAAGCATAGTCAGGGTTCGTCGCAAGGCAGCCCAGTaGGGAGGCAGGAGAACAGCT +
Preference number: 4 (lower is better)
Translates to: QWGKMRQSVTTASIVRVRRKAAQ*GGRRTA
Trigger: AGCTGTTCTCCTGCCTCCTCACTGGGCTGCCTTGCG...ACGAACCCTGACTATGCTTGCAGTGGTCACCGACTGCCTCATTTTCCCCCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
CDS-3UTR GCA 90 bp CCCAGGGAGGGCCTGATGAAGCTCAGTGTCCACTTAGCCCAGTCGTGCCACCCTATCAAAAGTGCCGTCTaGCTGGATGCCGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: PREGLMKLSVHLAQSCHPIKSAV*LDAVFQ
Trigger: CTGGAACACGGCATCCAGGCAGACGGCACTTTTGAT...AGGGTGGCACGACTGGGCTAAGTGGACACTGAGCTTCATCAGGCCCTCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR GCA 90 bp CACCCGACCCAGAAGCCCAGCTGGCTTTGCCTCTCAGTACCACTGCTCTCCAGCCTTGAGCATCAAAAGTaGCGTCTGCCTGGATGCCGT +
Preference number: 4 (lower is better)
Translates to: HPTQKPSWLCLSVPLLSSLEHQK*RLPGCR
Trigger: ACGGCATCCAGGCAGACGGCACTTTTGATGCTCAAG...GCTGGAGAGCAGTGGTACTGAGAGGCAAAGCCAGCTGGGCTTCTGGGTCGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR GCA 90 bp GCAAGGCAGCCCAGTGAGGAGGCAGGAGAACAGCTCTCAAATCTTCCTCCCCAAGGTCAATGCTCTCCTTaGCCACCGTGTAGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: ARQPSEEAGEQLSNLPPQGQCSP*PPCSGP
Trigger: GGGGCCACTACACGGTGGGCAAGGAGAGCATTGACC...TTGGGGAGGAAGATTTGAGAGCTGTTCTCCTGCCTCCTCACTGGGCTGCCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR GCA 90 bp GACACAAAGCTGCTCCTACCCAGGGAGGGCCTGATGAAGCTCAGTGTCCACTTACACTTAGCCCAGTCGTaGCACCCTGGGTACTGGGGC +
Preference number: 4 (lower is better)
Translates to: DTKLLLPREGLMKLSVHLHLAQS*HPGYWG
Trigger: GCCCCAGTACCCAGGGTGGCACGACTGGGCTAAGTG...TAAGTGGACACTGAGCTTCATCAGGCCCTCCCTGGGTAGGAGCAGCTTTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR CCA 90 bp GATTGGCAGTGGGGGAAAATGAGGCAGTCGGTGACCACTGCAAGCATAGTCAGGAGGGCCGTGTGTGCTTaGCAAGCTGCAGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: DWQWGKMRQSVTTASIVRRAVCA*QAAGPL
Trigger: CAGAGGCCCTGCAGCTTGCCAAGCACACACGGCCCT...CCTGACTATGCTTGCAGTGGTCACCGACTGCCTCATTTTCCCCCACTGCCAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR GCA 90 bp GCAGTGGGGGAAAATGAGGCAGTCGGTGACCACTGCAAGCATAGTCAGGGTTCGCCAGCACCAGGTCAATaGTCTCCTTGCCCACCGTGT +
Preference number: 4 (lower is better)
Translates to: AVGENEAVGDHCKHSQGSPAPGQ*SPCPPC
Trigger: ACACGGTGGGCAAGGAGAGCATTGACCTGGTGCTGG...CGAACCCTGACTATGCTTGCAGTGGTCACCGACTGCCTCATTTTCCCCCACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR GCA 90 bp CAGTGGGGGAAAATGAGGCAGTCGGTGACCACTGCAAGCATAGTCAGGGTTCGTAAGCTGCAGGGCCTCTaGTCCCAAAGCCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: QWGKMRQSVTTASIVRVRKLQGL*SQSLCL
Trigger: GAGGCACAGGCTTTGGGAGCAGAGGCCCTGCAGCTT...ACGAACCCTGACTATGCTTGCAGTGGTCACCGACTGCCTCATTTTCCCCCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR GCA 90 bp CAGAGGACAGAGTGGAGCCAGCGCGGTATCACTTCTGTGCTGTTCCCATCGAAGGTGTGCTTGGCAAGCTaGAGGGCCTCTGCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: QRTEWSQRGITSVLFPSKVCLAS*RASAPK
Trigger: TTTGGGAGCAGAGGCCCTGCAGCTTGCCAAGCACAC...CTTCGATGGGAACAGCACAGAAGTGATACCGCGCTGGCTCCACTCTGTCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR CCA 90 bp GGGCGGGGAGAGTGTTCTGTTCTCTTGAACATGTGCTTTGAATGGCACAGCATACCAGTCGTGCCACCCTaGGTACTGGGGCCAGGCACC +
Preference number: 4 (lower is better)
Translates to: GRGECSVLLNMCFEWHSIPVVPP*VLGPGT
Trigger: GGTGCCTGGCCCCAGTACCCAGGGTGGCACGACTGG...TATGCTGTGCCATTCAAAGCACATGTTCAAGAGAACAGAACACTCTCCCCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR CCA 90 bp GCAGTGGGGGAAAATGAGGCAGTCGGTGACCACTGCAAGCATAGTCAGGGTTCGCACCAGAGGACAGAGTaGAGCCAGCGCGGTATCACT +
Preference number: 4 (lower is better)
Translates to: AVGENEAVGDHCKHSQGSHQRTE*SQRGIT
Trigger: AGTGATACCGCGCTGGCTCCACTCTGTCCTCTGGTG...CGAACCCTGACTATGCTTGCAGTGGTCACCGACTGCCTCATTTTCCCCCACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
3UTR CAA 72 bp CTGAGTGTTCCCACTCCCCAGCCAGCAGGCCATGTTTaGGGGCTGGACCCAGCCCGATCTGGAATTGAAACT +
Preference number: 4 (lower is better)
Translates to: LSVPTPQPAGHV*GLDPARSGIET
Trigger: AGTTTCAATTCCAGATCGGGCTGGGTCCAGCCCCAAAACATGGCCTGCTGGCTGGGGAGTGGGAACACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
3UTR CAA 72 bp GGTACAAGAAAGTCATCAGTGCGGGGAACACTGGAATaGCGTGCCACCAGAGGACAGAGTGGAGCCAGCGCG +
Preference number: 4 (lower is better)
Translates to: GTRKSSVRGTLE*RATRGQSGASA
Trigger: CGCGCTGGCTCCACTCTGTCCTCTGGTGGCACGCAATTCCAGTGTTCCCCGCACTGATGACTTTCTTGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR TCA 90 bp AGGCTGGGGCGGGGAGAGTGTTCTGTTCTCTTGAACATGTGCTTTGAATGGCACGCTCCAGATCTATCATaGCGGCCCGGGGCACATGCT +
Preference number: 4 (lower is better)
Translates to: RLGRGECSVLLNMCFEWHAPDLS*RPGAHA
Trigger: AGCATGTGCCCCGGGCCGTCATGATAGATCTGGAGC...GTGCCATTCAAAGCACATGTTCAAGAGAACAGAACACTCTCCCCGCCCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR TCA 90 bp ACCCACTCATGTGAACGTCCGCTCACCCCTGCCCCGGAATCTTCCCAGGCCCAGGTGTATTGGAATATGTaGTGGGGGAGTGAATGCATG +
Preference number: 4 (lower is better)
Translates to: THSCERPLTPAPESSQAQVYWNM*WGSECM
Trigger: CATGCATTCACTCCCCCATCACATATTCCAATACAC...CTGGGCCTGGGAAGATTCCGGGGCAGGGGTGAGCGGACGTTCACATGAGTGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR TCA 90 bp CCCGGAGCGGGCTATAGACCCACTCATGTGAACGTCCGCTCACCCCTGCCCCGGTTATTTATGTGTGTATaGGGGCAGGAAATGTGTTCG +
Preference number: 4 (lower is better)
Translates to: PGAGYRPTHVNVRSPLPRLFMCV*GQEMCS
Trigger: CGAACACATTTCCTGCCCTCATACACACATAAATAA...CCGGGGCAGGGGTGAGCGGACGTTCACATGAGTGGGTCTATAGCCCGCTCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR TCA 90 bp CGGGTCCTGGCCAACCCAAATCGAGGGGCATTCTGCAGATCAGCTGGTCTGCCATGCTGGAGACGGAAATaGGATGGCATACACAGAGCT +
Preference number: 4 (lower is better)
Translates to: RVLANPNRGAFCRSAGLPCWRRK*DGIHRA
Trigger: AGCTCTGTGTATGCCATCTCATTTCCGTCTCCAGCA...TGGCAGACCAGCTGATCTGCAGAATGCCCCTCGATTTGGGTTGGCCAGGACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR TCA 90 bp GCAGTGGGGGAAAATGAGGCAGTCGGTGACCACTGCAAGCATAGTCAGGGTTCGCTGGATCCTTTGGCTTaGAGCCTGTGGGACACCAGT +
Preference number: 4 (lower is better)
Translates to: AVGENEAVGDHCKHSQGSLDPLA*SLWDTS
Trigger: ACTGGTGTCCCACAGGCTTCAAGCCAAAGGATCCAG...CGAACCCTGACTATGCTTGCAGTGGTCACCGACTGCCTCATTTTCCCCCACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR GCA 90 bp CCACTTCTTTTGTTTGCACAAGCCTACTTGAAAGCTCACGGTCTCAACTGGTTTGCCCGGGTGCCAAGGTaGCGTCTCAGCTGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: PLLLFAQAYLKAHGLNWFARVPR*RLSWAP
Trigger: GGGCGCCCAGCTGAGACGGCACCTTGGCACCCGGGC...AAACCAGTTGAGACCGTGAGCTTTCAAGTAGGCTTGTGCAAACAAAAGAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR GCA 90 bp CACCCGACCCAGAAGCCCAGCTGGCTTTGCCTCTCAGTACCACTGCTCTCCAGCCTTCGTGACCCCAGCTaGCGGAGAAAGAAATGTAAA +
Preference number: 4 (lower is better)
Translates to: HPTQKPSWLCLSVPLLSSLRDPS*RRKKCK
Trigger: TTTACATTTCTTTCTCCGGCAGCTGGGGTCACGAAG...GCTGGAGAGCAGTGGTACTGAGAGGCAAAGCCAGCTGGGCTTCTGGGTCGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR GCA 90 bp GCAGTGGGGGAAAATGAGGCAGTCGGTGACCACTGCAAGCATAGTCAGGGTTCGGGGGAACACTGGAATTaGGTGCCACCAGAGGACAGA +
Preference number: 4 (lower is better)
Translates to: AVGENEAVGDHCKHSQGSGEHWN*VPPEDR
Trigger: TCTGTCCTCTGGTGGCACGCAATTCCAGTGTTCCCC...CGAACCCTGACTATGCTTGCAGTGGTCACCGACTGCCTCATTTTCCCCCACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
CDS-3UTR CCA 90 bp AGGCTGGGGCGGGGAGAGTGTTCTGTTCTCTTGAACATGTGCTTTGAATGGCACCAGGCACCCTCCTCCTaGGTAAGGCAGGAATCAGGC +
Preference number: 4 (lower is better)
Translates to: RLGRGECSVLLNMCFEWHQAPSS*VRQESG
Trigger: GCCTGATTCCTGCCTTACCCAGGAGGAGGGTGCCTG...GTGCCATTCAAAGCACATGTTCAAGAGAACAGAACACTCTCCCCGCCCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR TCA 90 bp CCCAGGGAGGGCCTGATGAAGCTCAGTGTCCACTTAGCCCAGTCGTGCCACCCTTTGATCTTGCTAGCTTaGGCATCAAAAGTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: PREGLMKLSVHLAQSCHPLILLA*ASKVPS
Trigger: AGACGGCACTTTTGATGCTCAAGCTAGCAAGATCAA...AGGGTGGCACGACTGGGCTAAGTGGACACTGAGCTTCATCAGGCCCTCCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR TCA 90 bp AAAGGTGATTGGCAGTGGGGGAAAATGAGGCAGTCGGTGACCACTGCAAGCATAGCTCCAGATCTATCATaGCGGCCCGGGGCACATGCT +
Preference number: 4 (lower is better)
Translates to: KGDWQWGKMRQSVTTASIAPDLS*RPGAHA
Trigger: AGCATGTGCCCCGGGCCGTCATGATAGATCTGGAGC...TATGCTTGCAGTGGTCACCGACTGCCTCATTTTCCCCCACTGCCAATCACCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR GCA 90 bp GGGCGGGGAGAGTGTTCTGTTCTCTTGAACATGTGCTTTGAATGGCACAGCATAACGGCCCGGGGCACATaGTTCCCATTGCCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: GRGECSVLLNMCFEWHSITARGT*FPLPVS
Trigger: CGAGACTGGCAATGGGAAGCATGTGCCCCGGGCCGT...TATGCTGTGCCATTCAAAGCACATGTTCAAGAGAACAGAACACTCTCCCCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR GCA 90 bp AGGCTGGGGCGGGGAGAGTGTTCTGTTCTCTTGAACATGTGCTTTGAATGGCACCTGGCGGTAGGTTCCTaGCCGAACCTCATCCACTAC +
Preference number: 4 (lower is better)
Translates to: RLGRGECSVLLNMCFEWHLAVGS*PNLIHY
Trigger: GTAGTGGATGAGGTTCGGGCAGGAACCTACCGCCAG...GTGCCATTCAAAGCACATGTTCAAGAGAACAGAACACTCTCCCCGCCCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR GCA 90 bp TCTGATGTCAAAAGGCCACTTCTTTTGTTTGCACAAGCCTACTTGAAAGCTCACCTGACCGGAGCGGGCTaGAGCGGGCCCGGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: SDVKRPLLLFAQAYLKAHLTGAG*SGPGCQ
Trigger: TTGGCACCCGGGCCCGCTGCAGCCCGCTCCGGTCAG...GTGAGCTTTCAAGTAGGCTTGTGCAAACAAAAGAAGTGGCCTTTTGACATCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR GCA 90 bp AGTAACCTGTGGGACTGTGATGAAAGATTTAACATCATGTCATCAAAGTCCCCCCTGACCGGAGCGGGCTaGAGCGGGCCCGGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: SNLWDCDERFNIMSSKSPLTGAG*SGPGCQ
Trigger: TTGGCACCCGGGCCCGCTGCAGCCCGCTCCGGTCAG...GGGGGACTTTGATGACATGATGTTAAATCTTTCATCACAGTCCCACAGGTTACT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR GCA 90 bp CAGTGGGGGAAAATGAGGCAGTCGGTGACCACTGCAAGCATAGTCAGGGTTCGTCCACGTGGACTGATATaGATTCCCGCAAAGCGCACG +
Preference number: 4 (lower is better)
Translates to: QWGKMRQSVTTASIVRVRPRGLI*IPAKRT
Trigger: CGTGCGCTTTGCGGGAATGCATATCAGTCCACGTGG...ACGAACCCTGACTATGCTTGCAGTGGTCACCGACTGCCTCATTTTCCCCCACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR GCA 90 bp GATTGGCAGTGGGGGAAAATGAGGCAGTCGGTGACCACTGCAAGCATAGTCAGGTGGATCCTTTGGCAATaGACAAAGGCCCGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: DWQWGKMRQSVTTASIVRWILWQ*TKARLA
Trigger: CGCCAAGCGGGCCTTTGTGCATTGCCAAAGGATCCA...CCTGACTATGCTTGCAGTGGTCACCGACTGCCTCATTTTCCCCCACTGCCAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608634.1
CDS-3UTR CCA 90 bp AGCCCAGTGAGGAGGCAGGAGAACAGCTCTCAAATCTTCCTCCCCAAAGATAAGCCCGCTTGGCCCACGTaGACTGATATGCATTCCCGC +
Preference number: 4 (lower is better)
Translates to: SPVRRQENSSQIFLPKDKPAWPT*TDMHSR
Trigger: GCGGGAATGCATATCAGTCCACGTGGGCCAAGCGGG...CTTATCTTTGGGGAGGAAGATTTGAGAGCTGTTCTCCTGCCTCCTCACTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR CCA 90 bp AGGCTGGGGCGGGGAGAGTGTTCTGTTCTCTTGAACATGTGCTTTGAATGGCACGCCATGTTTTGGGGCTaGACCCAGCCCGATCTGGAA +
Preference number: 4 (lower is better)
Translates to: RLGRGECSVLLNMCFEWHAMFWG*TQPDLE
Trigger: TTCCAGATCGGGCTGGGTCCAGCCCCAAAACATGGC...GTGCCATTCAAAGCACATGTTCAAGAGAACAGAACACTCTCCCCGCCCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR TCA 90 bp GGGCGGGGAGAGTGTTCTGTTCTCTTGAACATGTGCTTTGAATGGCACAGCATAGCTCCAGATCTATCATaGCGGCCCGGGGCACATGCT +
Preference number: 4 (lower is better)
Translates to: GRGECSVLLNMCFEWHSIAPDLS*RPGAHA
Trigger: AGCATGTGCCCCGGGCCGTCATGATAGATCTGGAGC...TATGCTGTGCCATTCAAAGCACATGTTCAAGAGAACAGAACACTCTCCCCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR TCA 90 bp GGGCGGGGAGAGTGTTCTGTTCTCTTGAACATGTGCTTTGAATGGCACAGCATAAGGCCTCCTCGCATGTaGAACTGGGCTGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: GRGECSVLLNMCFEWHSIRPPRM*NWAAAS
Trigger: TGAGGCTGCAGCCCAGTTTCACATGCGAGGAGGCCT...TATGCTGTGCCATTCAAAGCACATGTTCAAGAGAACAGAACACTCTCCCCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR TCA 90 bp GACACAAAGCTGCTCCTACCCAGGGAGGGCCTGATGAAGCTCAGTGTCCACTTACATGCTAAGTCTAGATaGTGCCCGGAGCGGGCTATA +
Preference number: 4 (lower is better)
Translates to: DTKLLLPREGLMKLSVHLHAKSR*CPERAI
Trigger: TATAGCCCGCTCCGGGCATCATCTAGACTTAGCATG...TAAGTGGACACTGAGCTTCATCAGGCCCTCCCTGGGTAGGAGCAGCTTTGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR GCA 90 bp AGTAACCTGTGGGACTGTGATGAAAGATTTAACATCATGTCATCAAAGTCCCCCGCATTCCCGCATCGCTaGCGCTGTCCTCGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: SNLWDCDERFNIMSSKSPAFPHR*RCPRPR
Trigger: GCGCGGGCGAGGACAGCGGCAGCGATGCGGGAATGC...GGGGGACTTTGATGACATGATGTTAAATCTTTCATCACAGTCCCACAGGTTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR GCA 90 bp GACACAAAGCTGCTCCTACCCAGGGAGGGCCTGATGAAGCTCAGTGTCCACTTACTTGAGCATCAAAAGTaGCGTCTGCCTGGATGCCGT +
Preference number: 4 (lower is better)
Translates to: DTKLLLPREGLMKLSVHLLEHQK*RLPGCR
Trigger: ACGGCATCCAGGCAGACGGCACTTTTGATGCTCAAG...TAAGTGGACACTGAGCTTCATCAGGCCCTCCCTGGGTAGGAGCAGCTTTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR GCA 90 bp GGGCGGGGAGAGTGTTCTGTTCTCTTGAACATGTGCTTTGAATGGCACAGCATAGGTCAATGCTCTCCTTaGCCACCGTGTAGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: GRGECSVLLNMCFEWHSIGQCSP*PPCSGP
Trigger: GGGGCCACTACACGGTGGGCAAGGAGAGCATTGACC...TATGCTGTGCCATTCAAAGCACATGTTCAAGAGAACAGAACACTCTCCCCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR GCA 90 bp GCCACTTCTTTTGTTTGCACAAGCCTACTTGAAAGCTCACGGTCTCAACTGGTTAAAGCCTGTGCCTCCTaGCGCCAAGGCCCGCCTGGT +
Preference number: 4 (lower is better)
Translates to: ATSFVCTSLLESSRSQLVKACAS*RQGPPG
Trigger: ACCAGGCGGGCCTTGGCGGCAGGAGGCACAGGCTTT...AACCAGTTGAGACCGTGAGCTTTCAAGTAGGCTTGTGCAAACAAAAGAAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR GCA 90 bp AGTAACCTGTGGGACTGTGATGAAAGATTTAACATCATGTCATCAAAGTCCCCCCCTCTCAGCTGGGCCTaGCCGCCCCGACTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SNLWDCDERFNIMSSKSPPLSWA*PPRLLQ
Trigger: CTGGAGCAGTCGGGGCGGGCAGGCCCAGCTGAGAGG...GGGGGACTTTGATGACATGATGTTAAATCTTTCATCACAGTCCCACAGGTTACT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR CCA 90 bp GGGCGGGGAGAGTGTTCTGTTCTCTTGAACATGTGCTTTGAATGGCACAGCATACAGCAGGCCATGTTTTaGGGCTGGACCCAGCCCGAT +
Preference number: 4 (lower is better)
Translates to: GRGECSVLLNMCFEWHSIQQAMF*GWTQPD
Trigger: ATCGGGCTGGGTCCAGCCCCAAAACATGGCCTGCTG...TATGCTGTGCCATTCAAAGCACATGTTCAAGAGAACAGAACACTCTCCCCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR CCA 90 bp CAGAGGACAGAGTGGAGCCAGCGCGGTATCACTTCTGTGCTGTTCCCATCGAAGGGGTGGTGTAAGGTATaGGCAAAGGTGATTGGCAGT +
Preference number: 4 (lower is better)
Translates to: QRTEWSQRGITSVLFPSKGWCKV*AKVIGS
Trigger: ACTGCCAATCACCTTTGCCCATACCTTACACCACCC...CTTCGATGGGAACAGCACAGAAGTGATACCGCGCTGGCTCCACTCTGTCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR CCA 90 bp CACCCGACCCAGAAGCCCAGCTGGCTTTGCCTCTCAGTACCACTGCTCTCCAGCACACAGAGTGCTGATTaGTGTGTTTTTACAGAGTGC +
Preference number: 4 (lower is better)
Translates to: HPTQKPSWLCLSVPLLSSTQSAD*CVFTEC
Trigger: GCACTCTGTAAAAACACACCAATCAGCACTCTGTGT...GCTGGAGAGCAGTGGTACTGAGAGGCAAAGCCAGCTGGGCTTCTGGGTCGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR GCA 90 bp AAAGGTGATTGGCAGTGGGGGAAAATGAGGCAGTCGGTGACCACTGCAAGCATACTGTCAGCTTCCGTATaGGGTCCAGCACCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: KGDWQWGKMRQSVTTASILSASV*GPAPGQ
Trigger: TTGACCTGGTGCTGGACCGCATACGGAAGCTGACAG...TATGCTTGCAGTGGTCACCGACTGCCTCATTTTCCCCCACTGCCAATCACCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR GCA 90 bp AGTAACCTGTGGGACTGTGATGAAAGATTTAACATCATGTCATCAAAGTCCCCCTGCAGCGGGCCCGGGTaGCAAGGTGCCGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SNLWDCDERFNIMSSKSPCSGPG*QGAVSA
Trigger: AGCTGAGACGGCACCTTGGCACCCGGGCCCGCTGCA...GGGGGACTTTGATGACATGATGTTAAATCTTTCATCACAGTCCCACAGGTTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR GCA 90 bp GCAAGGCAGCCCAGTGAGGAGGCAGGAGAACAGCTCTCAAATCTTCCTCCCCAACAAGAAAGTCATCAGTaGGGGGAACACTGGAATTGC +
Preference number: 4 (lower is better)
Translates to: ARQPSEEAGEQLSNLPPQQESHQ*GEHWNC
Trigger: GCAATTCCAGTGTTCCCCGCACTGATGACTTTCTTG...TTGGGGAGGAAGATTTGAGAGCTGTTCTCCTGCCTCCTCACTGGGCTGCCTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
CDS-3UTR CCA 90 bp GGCCAACCCAAATCGAGGGGCATTCTGCAGATCAGCTGGTCTGCCATCTTCAAACATACACAGAGCTCCTaGTACAGGCAGGTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: GQPKSRGILQISWSAIFKHTQSS*YRQVLK
Trigger: CTTCAGCACCTGCCTGTACCAGGAGCTCTGTGTATG...TTTGAAGATGGCAGACCAGCTGATCTGCAGAATGCCCCTCGATTTGGGTTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR TCA 90 bp GGTATGGGCAAAGGTGATTGGCAGTGGGGGAAAATGAGGCAGTCGGTGACCACTGCAGACCTAATCAGATaGACCCCATGGTCTCATATG +
Preference number: 4 (lower is better)
Translates to: GMGKGDWQWGKMRQSVTTADLIR*TPWSHM
Trigger: CATATGAGACCATGGGGTTCATCTGATTAGGTCTGC...AGTGGTCACCGACTGCCTCATTTTCCCCCACTGCCAATCACCTTTGCCCATACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
CDS-3UTR GCA 90 bp GGTATGGGCAAAGGTGATTGGCAGTGGGGGAAAATGAGGCAGTCGGTGACCACTGAAAGAAATGTAAAATaGAGCCAGGCGAATCGCGCG +
Preference number: 4 (lower is better)
Translates to: GMGKGDWQWGKMRQSVTTERNVK*SQANRA
Trigger: CGCGCGATTCGCCTGGCTGCATTTTACATTTCTTTC...AGTGGTCACCGACTGCCTCATTTTCCCCCACTGCCAATCACCTTTGCCCATACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR GCA 90 bp AGTAACCTGTGGGACTGTGATGAAAGATTTAACATCATGTCATCAAAGTCCCCCAGCCACCGCGCCCAATaGACAAAGGCCCGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: SNLWDCDERFNIMSSKSPSHRAQ*TKARLA
Trigger: CGCCAAGCGGGCCTTTGTGCATTGGGCGCGGTGGCT...GGGGGACTTTGATGACATGATGTTAAATCTTTCATCACAGTCCCACAGGTTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR CCA 90 bp ACCCACTCATGTGAACGTCCGCTCACCCCTGCCCCGGAATCTTCCCAGGCCCAGAACATGTGCTTTGAATaGCACAGCATAAATAAAGAG +
Preference number: 4 (lower is better)
Translates to: THSCERPLTPAPESSQAQNMCFE*HSINKE
Trigger: CTCTTTATTTATGCTGTGCCATTCAAAGCACATGTT...CTGGGCCTGGGAAGATTCCGGGGCAGGGGTGAGCGGACGTTCACATGAGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR CCA 90 bp CCACTTCTTTTGTTTGCACAAGCCTACTTGAAAGCTCACGGTCTCAACTGGTTTGGAAAGGCTCCTGACTaGGGTGCAGCTGACCGGAGC +
Preference number: 4 (lower is better)
Translates to: PLLLFAQAYLKAHGLNWFGKAPD*GAADRS
Trigger: GCTCCGGTCAGCTGCACCCCAGTCAGGAGCCTTTCC...AAACCAGTTGAGACCGTGAGCTTTCAAGTAGGCTTGTGCAAACAAAAGAAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR CCA 90 bp CCAGAGGACAGAGTGGAGCCAGCGCGGTATCACTTCTGTGCTGTTCCCATCGAAATTCTGCAGATCAGCTaGTCTGCCATCTTCAAACGA +
Preference number: 4 (lower is better)
Translates to: PEDRVEPARYHFCAVPIEILQIS*SAIFKR
Trigger: TCGTTTGAAGATGGCAGACCAGCTGATCTGCAGAAT...TTCGATGGGAACAGCACAGAAGTGATACCGCGCTGGCTCCACTCTGTCCTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR CCA 90 bp TCGAGGGGCATTCTGCAGATCAGCTGGTCTGCCATCTTCAAACGATTCATGAAACACCAGAGGACAGAGTaGAGCCAGCGCGGTATCACT +
Preference number: 4 (lower is better)
Translates to: SRGILQISWSAIFKRFMKHQRTE*SQRGIT
Trigger: AGTGATACCGCGCTGGCTCCACTCTGTCCTCTGGTG...TTTCATGAATCGTTTGAAGATGGCAGACCAGCTGATCTGCAGAATGCCCCTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR CCA 90 bp GATGTCAAAAGGCCACTTCTTTTGTTTGCACAAGCCTACTTGAAAGCTCACGGTCCGCCAAGGCCCGCCTaGTTGCTGGAGACGGAAATG +
Preference number: 4 (lower is better)
Translates to: DVKRPLLLFAQAYLKAHGPPRPA*LLETEM
Trigger: CATTTCCGTCTCCAGCAACCAGGCGGGCCTTGGCGG...ACCGTGAGCTTTCAAGTAGGCTTGTGCAAACAAAAGAAGTGGCCTTTTGACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR TCA 90 bp GACACAAAGCTGCTCCTACCCAGGGAGGGCCTGATGAAGCTCAGTGTCCACTTATTGATCTTGCTAGCTTaGGCATCAAAAGTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: DTKLLLPREGLMKLSVHLLILLA*ASKVPS
Trigger: AGACGGCACTTTTGATGCTCAAGCTAGCAAGATCAA...TAAGTGGACACTGAGCTTCATCAGGCCCTCCCTGGGTAGGAGCAGCTTTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR TCA 90 bp GACACAAAGCTGCTCCTACCCAGGGAGGGCCTGATGAAGCTCAGTGTCCACTTAGTGTATTGGAATATGTaGTGGGGGAGTGAATGCATG +
Preference number: 4 (lower is better)
Translates to: DTKLLLPREGLMKLSVHLVYWNM*WGSECM
Trigger: CATGCATTCACTCCCCCATCACATATTCCAATACAC...TAAGTGGACACTGAGCTTCATCAGGCCCTCCCTGGGTAGGAGCAGCTTTGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR TCA 90 bp TCGAGGGGCATTCTGCAGATCAGCTGGTCTGCCATCTTCAAACGATTCATGAAATTGGCCCACGTGGACTaGTATGCATTCCCGCAAAGC +
Preference number: 4 (lower is better)
Translates to: SRGILQISWSAIFKRFMKLAHVD*YAFPQS
Trigger: GCTTTGCGGGAATGCATATCAGTCCACGTGGGCCAA...TTTCATGAATCGTTTGAAGATGGCAGACCAGCTGATCTGCAGAATGCCCCTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR GCA 90 bp AGTAACCTGTGGGACTGTGATGAAAGATTTAACATCATGTCATCAAAGTCCCCCACGGCCCGGGGCACATaGTTCCCATTGCCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: SNLWDCDERFNIMSSKSPTARGT*FPLPVS
Trigger: CGAGACTGGCAATGGGAAGCATGTGCCCCGGGCCGT...GGGGGACTTTGATGACATGATGTTAAATCTTTCATCACAGTCCCACAGGTTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR GCA 90 bp GGCCAACCCAAATCGAGGGGCATTCTGCAGATCAGCTGGTCTGCCATCTTCAAACTTCGTGACCCCAGCTaGCGGAGAAAGAAATGTAAA +
Preference number: 4 (lower is better)
Translates to: GQPKSRGILQISWSAIFKLRDPS*RRKKCK
Trigger: TTTACATTTCTTTCTCCGGCAGCTGGGGTCACGAAG...TTTGAAGATGGCAGACCAGCTGATCTGCAGAATGCCCCTCGATTTGGGTTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR CCA 90 bp GATGTCAAAAGGCCACTTCTTTTGTTTGCACAAGCCTACTTGAAAGCTCACGGTCGACATTCACATCCTTaGGCACCACGTCGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: DVKRPLLLFAQAYLKAHGRHSHP*APRRPG
Trigger: ACCGGGGCGACGTGGTGCCCAAGGATGTGAATGTCG...ACCGTGAGCTTTCAAGTAGGCTTGTGCAAACAAAAGAAGTGGCCTTTTGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
CDS-3UTR CCA 90 bp AGCAGAGCCTCAGTAACCTGTGGGACTGTGATGAAAGATTTAACATCATGTCATGGAAAGGCTCCTGACTaGGGTGCAGCTGACCGGAGC +
Preference number: 4 (lower is better)
Translates to: SRASVTCGTVMKDLTSCHGKAPD*GAADRS
Trigger: GCTCCGGTCAGCTGCACCCCAGTCAGGAGCCTTTCC...ATGACATGATGTTAAATCTTTCATCACAGTCCCACAGGTTACTGAGGCTCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR CCA 90 bp CAGTGGGGGAAAATGAGGCAGTCGGTGACCACTGCAAGCATAGTCAGGGTTCGTATTCTGCAGATCAGCTaGTCTGCCATCTTCAAACGA +
Preference number: 4 (lower is better)
Translates to: QWGKMRQSVTTASIVRVRILQIS*SAIFKR
Trigger: TCGTTTGAAGATGGCAGACCAGCTGATCTGCAGAAT...ACGAACCCTGACTATGCTTGCAGTGGTCACCGACTGCCTCATTTTCCCCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
CDS-3UTR CCA 90 bp AAAGGTGATTGGCAGTGGGGGAAAATGAGGCAGTCGGTGACCACTGCAAGCATAATGGGCAAAGGTGATTaGCAGTGGGGGAAAATGAGG +
Preference number: 4 (lower is better)
Translates to: KGDWQWGKMRQSVTTASIMGKGD*QWGKMR
Trigger: CCTCATTTTCCCCCACTGCCAATCACCTTTGCCCAT...TATGCTTGCAGTGGTCACCGACTGCCTCATTTTCCCCCACTGCCAATCACCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
CDS-3UTR TCA 90 bp AGCAGAGCCTCAGTAACCTGTGGGACTGTGATGAAAGATTTAACATCATGTCATGCTCCAGATCTATCATaGCGGCCCGGGGCACATGCT +
Preference number: 4 (lower is better)
Translates to: SRASVTCGTVMKDLTSCHAPDLS*RPGAHA
Trigger: AGCATGTGCCCCGGGCCGTCATGATAGATCTGGAGC...ATGACATGATGTTAAATCTTTCATCACAGTCCCACAGGTTACTGAGGCTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR GCA 90 bp AGGAGCTGCCCCAAGTTCCTGAAAAACAATTTGAACGATCATGACAGTAGTGACCTGGCGGTAGGTTCCTaGCCGAACCTCATCCACTAC +
Preference number: 4 (lower is better)
Translates to: RSCPKFLKNNLNDHDSSDLAVGS*PNLIHY
Trigger: GTAGTGGATGAGGTTCGGGCAGGAACCTACCGCCAG...GTCACTACTGTCATGATCGTTCAAATTGTTTTTCAGGAACTTGGGGCAGCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR GCA 90 bp AGTAACCTGTGGGACTGTGATGAAAGATTTAACATCATGTCATCAAAGTCCCCCGCCTCTCAGTACCACTaGTCTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: SNLWDCDERFNIMSSKSPASQYH*SPAWAT
Trigger: TGTCGCCCAGGCTGGAGAGCAGTGGTACTGAGAGGC...GGGGGACTTTGATGACATGATGTTAAATCTTTCATCACAGTCCCACAGGTTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR CCA 90 bp AGCAGAGCCTCAGTAACCTGTGGGACTGTGATGAAAGATTTAACATCATGTCATCGACATTCACATCCTTaGGCACCACGTCGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: SRASVTCGTVMKDLTSCHRHSHP*APRRPG
Trigger: ACCGGGGCGACGTGGTGCCCAAGGATGTGAATGTCG...ATGACATGATGTTAAATCTTTCATCACAGTCCCACAGGTTACTGAGGCTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680175.1
3UTR CAA 72 bp TCGCTTGGGGCCTCTGATGTCAAAAGGCCACTTCTTTaGTTTGCACAAGCCTACTTGAAAGCTCACGGTCTC +
Preference number: 4 (lower is better)
Translates to: SLGASDVKRPLL*FAQAYLKAHGL
Trigger: GAGACCGTGAGCTTTCAAGTAGGCTTGTGCAAACAAAAGAAGTGGCCTTTTGACATCAGAGGCCCCAAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
CDS-3UTR TCA 90 bp AGTAACCTGTGGGACTGTGATGAAAGATTTAACATCATGTCATCAAAGTCCCCCTTGGCCCACGTGGACTaGTATGCATTCCCGCATCGC +
Preference number: 4 (lower is better)
Translates to: SNLWDCDERFNIMSSKSPLAHVD*YAFPHR
Trigger: GCGATGCGGGAATGCATATCAGTCCACGTGGGCCAA...GGGGGACTTTGATGACATGATGTTAAATCTTTCATCACAGTCCCACAGGTTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR TCA 90 bp AAAGGTGATTGGCAGTGGGGGAAAATGAGGCAGTCGGTGACCACTGCAAGCATATTGATCTTGCTAGCTTaGGCATCAAAAGTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: KGDWQWGKMRQSVTTASILILLA*ASKVPS
Trigger: AGACGGCACTTTTGATGCTCAAGCTAGCAAGATCAA...TATGCTTGCAGTGGTCACCGACTGCCTCATTTTCCCCCACTGCCAATCACCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR TCA 90 bp TCTGATGTCAAAAGGCCACTTCTTTTGTTTGCACAAGCCTACTTGAAAGCTCACCGGTCTCAACTGGTTTaGACTAGGCAGGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SDVKRPLLLFAQAYLKAHRSQLV*TRQELP
Trigger: GGGCAGCTCCTGCCTAGTTCAAACCAGTTGAGACCG...GTGAGCTTTCAAGTAGGCTTGTGCAAACAAAAGAAGTGGCCTTTTGACATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
CDS-3UTR GCA 90 bp AGCAGAGCCTCAGTAACCTGTGGGACTGTGATGAAAGATTTAACATCATGTCATCTGGCGGTAGGTTCCTaGCCGAACCTCATCCACTAC +
Preference number: 4 (lower is better)
Translates to: SRASVTCGTVMKDLTSCHLAVGS*PNLIHY
Trigger: GTAGTGGATGAGGTTCGGGCAGGAACCTACCGCCAG...ATGACATGATGTTAAATCTTTCATCACAGTCCCACAGGTTACTGAGGCTCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR GCA 90 bp AGTAACCTGTGGGACTGTGATGAAAGATTTAACATCATGTCATCAAAGTCCCCCCCAGCACCAGGTCAATaGTCTCCTTGCCCACCGTGT +
Preference number: 4 (lower is better)
Translates to: SNLWDCDERFNIMSSKSPPAPGQ*SPCPPC
Trigger: ACACGGTGGGCAAGGAGAGCATTGACCTGGTGCTGG...GGGGGACTTTGATGACATGATGTTAAATCTTTCATCACAGTCCCACAGGTTACT
49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR GCA 90 bp AGCCCAGTGAGGAGGCAGGAGAACAGCTCTCAAATCTTCCTCCCCAAAGATAAGGCAGATCAGCTGGTCTaGCATCTTCAAACGATTCAT +
Preference number: 4 (lower is better)
Translates to: SPVRRQENSSQIFLPKDKADQLV*HLQTIH
Trigger: ATGAATCGTTTGAAGATGGCAGACCAGCTGATCTGC...CTTATCTTTGGGGAGGAAGATTTGAGAGCTGTTCTCCTGCCTCCTCACTGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
CDS-3UTR GCA 90 bp CTCAACTGGTTTGAACTAGGCAGGAGCTGCCCCAAGTTCCTGAAAAACAATTTGAACACTGGAATTGCGTaGCACCAGAGGACAGAGTGG +
Preference number: 4 (lower is better)
Translates to: LNWFELGRSCPKFLKNNLNTGIA*HQRTEW
Trigger: CCACTCTGTCCTCTGGTGGCACGCAATTCCAGTGTT...CAAATTGTTTTTCAGGAACTTGGGGCAGCTCCTGCCTAGTTCAAACCAGTTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
CDS-3UTR GCA 90 bp AGGAGCTGCCCCAAGTTCCTGAAAAACAATTTGAACGATCATGACAGTAGTGACGGGGAACACTGGAATTaGGTGCCACCAGAGGACAGA +
Preference number: 4 (lower is better)
Translates to: RSCPKFLKNNLNDHDSSDGEHWN*VPPEDR
Trigger: TCTGTCCTCTGGTGGCACGCAATTCCAGTGTTCCCC...GTCACTACTGTCATGATCGTTCAAATTGTTTTTCAGGAACTTGGGGCAGCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
CDS-3UTR GCA 90 bp AGCAGAGCCTCAGTAACCTGTGGGACTGTGATGAAAGATTTAACATCATGTCATGTGTGCTTGGCAAGCTaGAGGGCCTCTGCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: SRASVTCGTVMKDLTSCHVCLAS*RASAPK
Trigger: TTTGGGAGCAGAGGCCCTGCAGCTTGCCAAGCACAC...ATGACATGATGTTAAATCTTTCATCACAGTCCCACAGGTTACTGAGGCTCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR TCA 90 bp AGTAACCTGTGGGACTGTGATGAAAGATTTAACATCATGTCATCAAAGTCCCCCAATCTCTTGATCTCATaGTCCGCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: SNLWDCDERFNIMSSKSPNLLIS*SAHLGL
Trigger: GAGGCCGAGGTGGGCGGATCATGAGATCAAGAGATT...GGGGGACTTTGATGACATGATGTTAAATCTTTCATCACAGTCCCACAGGTTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR GCA 90 bp CCACTTCTTTTGTTTGCACAAGCCTACTTGAAAGCTCACGGTCTCAACTGGTTTCTTGAGCATCAAAAGTaGCGTCTGCCTGGATGCCGT +
Preference number: 4 (lower is better)
Translates to: PLLLFAQAYLKAHGLNWFLEHQK*RLPGCR
Trigger: ACGGCATCCAGGCAGACGGCACTTTTGATGCTCAAG...AAACCAGTTGAGACCGTGAGCTTTCAAGTAGGCTTGTGCAAACAAAAGAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR GCA 90 bp GATGTCAAAAGGCCACTTCTTTTGTTTGCACAAGCCTACTTGAAAGCTCACGGTAACACTGGAATTGCGTaGCACCAGAGGACAGAGTGG +
Preference number: 4 (lower is better)
Translates to: DVKRPLLLFAQAYLKAHGNTGIA*HQRTEW
Trigger: CCACTCTGTCCTCTGGTGGCACGCAATTCCAGTGTT...ACCGTGAGCTTTCAAGTAGGCTTGTGCAAACAAAAGAAGTGGCCTTTTGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
CDS-3UTR GCA 90 bp AAAGGTGATTGGCAGTGGGGGAAAATGAGGCAGTCGGTGACCACTGCAAGCATAGCCACTTCTTTTGTTTaGACAAGCCTACTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: KGDWQWGKMRQSVTTASIATSFV*TSLLES
Trigger: GCTTTCAAGTAGGCTTGTGCAAACAAAAGAAGTGGC...TATGCTTGCAGTGGTCACCGACTGCCTCATTTTCCCCCACTGCCAATCACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
CDS-3UTR GCA 90 bp AGCCCAGTGAGGAGGCAGGAGAACAGCTCTCAAATCTTCCTCCCCAAAGATAAGGCCACTTCTTTTGTTTaGACAAGCCTACTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: SPVRRQENSSQIFLPKDKATSFV*TSLLES
Trigger: GCTTTCAAGTAGGCTTGTGCAAACAAAAGAAGTGGC...CTTATCTTTGGGGAGGAAGATTTGAGAGCTGTTCTCCTGCCTCCTCACTGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
CDS-3UTR CCA 90 bp GCCACTTCTTTTGTTTGCACAAGCCTACTTGAAAGCTCACGGTCTCAACTGGTTGAGACGGAAATGAGATaGCATACACAGAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ATSFVCTSLLESSRSQLVETEMR*HTQSSW
Trigger: CCAGGAGCTCTGTGTATGCCATCTCATTTCCGTCTC...AACCAGTTGAGACCGTGAGCTTTCAAGTAGGCTTGTGCAAACAAAAGAAGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR CCA 90 bp GATGTCAAAAGGCCACTTCTTTTGTTTGCACAAGCCTACTTGAAAGCTCACGGTCAGGAGATCCCCAACTaGATCCTTTGGCTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: DVKRPLLLFAQAYLKAHGQEIPN*ILWLEA
Trigger: GGCTTCAAGCCAAAGGATCCAGTTGGGGATCTCCTG...ACCGTGAGCTTTCAAGTAGGCTTGTGCAAACAAAAGAAGTGGCCTTTTGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR CCA 90 bp AGTAACCTGTGGGACTGTGATGAAAGATTTAACATCATGTCATCAAAGTCCCCCACCCAGAAGCCCAGCTaGCTTTGCCTCTCAGTACCA +
Preference number: 4 (lower is better)
Translates to: SNLWDCDERFNIMSSKSPTQKPS*LCLSVP
Trigger: TGGTACTGAGAGGCAAAGCCAGCTGGGCTTCTGGGT...GGGGGACTTTGATGACATGATGTTAAATCTTTCATCACAGTCCCACAGGTTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR TCA 90 bp GGGCGGGGAGAGTGTTCTGTTCTCTTGAACATGTGCTTTGAATGGCACAGCATAAGTGTTCTGTTCTCTTaGACATGTGCTTTGAATGGC +
Preference number: 4 (lower is better)
Translates to: GRGECSVLLNMCFEWHSISVLFS*TCALNG
Trigger: GCCATTCAAAGCACATGTTCAAGAGAACAGAACACT...TATGCTGTGCCATTCAAAGCACATGTTCAAGAGAACAGAACACTCTCCCCGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR TCA 90 bp AGGAGCTGCCCCAAGTTCCTGAAAAACAATTTGAACGATCATGACAGTAGTGACGGTACAGGCAGGTGCTaGAGACTGTTCCCGTTTTTA +
Preference number: 4 (lower is better)
Translates to: RSCPKFLKNNLNDHDSSDGTGRC*RLFPFL
Trigger: TAAAAACGGGAACAGTCTTCAGCACCTGCCTGTACC...GTCACTACTGTCATGATCGTTCAAATTGTTTTTCAGGAACTTGGGGCAGCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR CCA 90 bp AGGAGCTGCCCCAAGTTCCTGAAAAACAATTTGAACGATCATGACAGTAGTGACCAGGAGATCCCCAACTaGATCCTTTGGCAATGCACA +
Preference number: 4 (lower is better)
Translates to: RSCPKFLKNNLNDHDSSDQEIPN*ILWQCT
Trigger: TGTGCATTGCCAAAGGATCCAGTTGGGGATCTCCTG...GTCACTACTGTCATGATCGTTCAAATTGTTTTTCAGGAACTTGGGGCAGCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000608634.1
3UTR CAA 72 bp GGAATCAGGCTGGGGCGGGGAGAGTGTTCTGTTCTCTaGAACATGTGCTTTGAATGGCACAGCATAAATAAA +
Preference number: 4 (lower is better)
Translates to: GIRLGRGECSVL*NMCFEWHSINK
Trigger: TTTATTTATGCTGTGCCATTCAAAGCACATGTTCAAGAGAACAGAACACTCTCCCCGCCCCAGCCTGATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR TCA 90 bp GGGCGGGGAGAGTGTTCTGTTCTCTTGAACATGTGCTTTGAATGGCACAGCATATTATTTATGTGTGTATaGGGGCAGGAAATGTGTTCG +
Preference number: 4 (lower is better)
Translates to: GRGECSVLLNMCFEWHSILFMCV*GQEMCS
Trigger: CGAACACATTTCCTGCCCTCATACACACATAAATAA...TATGCTGTGCCATTCAAAGCACATGTTCAAGAGAACAGAACACTCTCCCCGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR TCA 90 bp CCACTTCTTTTGTTTGCACAAGCCTACTTGAAAGCTCACGGTCTCAACTGGTTTGCAGACCTAATCAGATaGACCCCATGGTCTCATATG +
Preference number: 4 (lower is better)
Translates to: PLLLFAQAYLKAHGLNWFADLIR*TPWSHM
Trigger: CATATGAGACCATGGGGTTCATCTGATTAGGTCTGC...AAACCAGTTGAGACCGTGAGCTTTCAAGTAGGCTTGTGCAAACAAAAGAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
CDS-3UTR TCA 90 bp AGTAACCTGTGGGACTGTGATGAAAGATTTAACATCATGTCATCAAAGTCCCCCATGGTCTCAATCTCTTaGTCTCATGATCCGCCCACC +
Preference number: 4 (lower is better)
Translates to: SNLWDCDERFNIMSSKSPMVSIS*SHDPPT
Trigger: GGTGGGCGGATCATGAGATCAAGAGATTGAGACCAT...GGGGGACTTTGATGACATGATGTTAAATCTTTCATCACAGTCCCACAGGTTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR GCA 90 bp AGGAGCTGCCCCAAGTTCCTGAAAAACAATTTGAACGATCATGACAGTAGTGACCAAGAAAGTCATCAGTaGGGGGAACACTGGAATTGC +
Preference number: 4 (lower is better)
Translates to: RSCPKFLKNNLNDHDSSDQESHQ*GEHWNC
Trigger: GCAATTCCAGTGTTCCCCGCACTGATGACTTTCTTG...GTCACTACTGTCATGATCGTTCAAATTGTTTTTCAGGAACTTGGGGCAGCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
CDS-3UTR CCA 90 bp TCTGATGTCAAAAGGCCACTTCTTTTGTTTGCACAAGCCTACTTGAAAGCTCACGGGTGGTGTAAGGTATaGGCAAAGGTGATTGGCAGT +
Preference number: 4 (lower is better)
Translates to: SDVKRPLLLFAQAYLKAHGWCKV*AKVIGS
Trigger: ACTGCCAATCACCTTTGCCCATACCTTACACCACCC...GTGAGCTTTCAAGTAGGCTTGTGCAAACAAAAGAAGTGGCCTTTTGACATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
CDS-3UTR CCA 90 bp AGTAACCTGTGGGACTGTGATGAAAGATTTAACATCATGTCATCAAAGTCCCCCAGGGTTTCACTGCGTTaGCCAGGATGGTCTCAATCT +
Preference number: 4 (lower is better)
Translates to: SNLWDCDERFNIMSSKSPRVSLR*PGWSQS
Trigger: AGATTGAGACCATCCTGGCCAACGCAGTGAAACCCT...GGGGGACTTTGATGACATGATGTTAAATCTTTCATCACAGTCCCACAGGTTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR GCA 90 bp AGTAACCTGTGGGACTGTGATGAAAGATTTAACATCATGTCATCAAAGTCCCCCGAAAGAAATGTAAAATaGAGCCAGGCGAATCGCGCG +
Preference number: 4 (lower is better)
Translates to: SNLWDCDERFNIMSSKSPERNVK*SQANRA
Trigger: CGCGCGATTCGCCTGGCTGCATTTTACATTTCTTTC...GGGGGACTTTGATGACATGATGTTAAATCTTTCATCACAGTCCCACAGGTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR CCA 90 bp AGTAACCTGTGGGACTGTGATGAAAGATTTAACATCATGTCATCAAAGTCCCCCCCACATCCTGCTGATTaGTCCATTTTACAGAGCGCT +
Preference number: 4 (lower is better)
Translates to: SNLWDCDERFNIMSSKSPPHPAD*SILQSA
Trigger: AGCGCTCTGTAAAATGGACCAATCAGCAGGATGTGG...GGGGGACTTTGATGACATGATGTTAAATCTTTCATCACAGTCCCACAGGTTACT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR GCA 90 bp TCTGATGTCAAAAGGCCACTTCTTTTGTTTGCACAAGCCTACTTGAAAGCTCACGCAGATCAGCTGGTCTaGCATCTTCAAACGATTCAT +
Preference number: 4 (lower is better)
Translates to: SDVKRPLLLFAQAYLKAHADQLV*HLQTIH
Trigger: ATGAATCGTTTGAAGATGGCAGACCAGCTGATCTGC...GTGAGCTTTCAAGTAGGCTTGTGCAAACAAAAGAAGTGGCCTTTTGACATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
CDS-3UTR GCA 90 bp AGCAGAGCCTCAGTAACCTGTGGGACTGTGATGAAAGATTTAACATCATGTCATCAGAGTGCTGATTGGTaGCTTTACAAACCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: SRASVTCGTVMKDLTSCHQSADW*LYKPLA
Trigger: AGCTAAAGGTTTGTAAAGGCACCAATCAGCACTCTG...ATGACATGATGTTAAATCTTTCATCACAGTCCCACAGGTTACTGAGGCTCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR TCA 90 bp AGGAGCTGCCCCAAGTTCCTGAAAAACAATTTGAACGATCATGACAGTAGTGACATTATTACATACATGTaGTACAGGTTCATTCTGCCC +
Preference number: 4 (lower is better)
Translates to: RSCPKFLKNNLNDHDSSDIITYM*YRFILP
Trigger: GGGCAGAATGAACCTGTATCACATGTATGTAATAAT...GTCACTACTGTCATGATCGTTCAAATTGTTTTTCAGGAACTTGGGGCAGCTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR CCA 90 bp AGCAGAGCCTCAGTAACCTGTGGGACTGTGATGAAAGATTTAACATCATGTCATTCACAGAGCGCTGATTaGTGCATTTACAATCCTTTT +
Preference number: 4 (lower is better)
Translates to: SRASVTCGTVMKDLTSCHSQSAD*CIYNPF
Trigger: AAAAGGATTGTAAATGCACCAATCAGCGCTCTGTGA...ATGACATGATGTTAAATCTTTCATCACAGTCCCACAGGTTACTGAGGCTCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR CCA 90 bp AGCAGAGCCTCAGTAACCTGTGGGACTGTGATGAAAGATTTAACATCATGTCATACACAGAGCACTGATTaGTGCATTTACAATCCTTTA +
Preference number: 4 (lower is better)
Translates to: SRASVTCGTVMKDLTSCHTQSTD*CIYNPL
Trigger: TAAAGGATTGTAAATGCACCAATCAGTGCTCTGTGT...ATGACATGATGTTAAATCTTTCATCACAGTCCCACAGGTTACTGAGGCTCTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR CCA 90 bp AGTAACCTGTGGGACTGTGATGAAAGATTTAACATCATGTCATCAAAGTCCCCCTTACAGAGTGCTGATTaGTGTGTTTACAAACCTTTA +
Preference number: 4 (lower is better)
Translates to: SNLWDCDERFNIMSSKSPLQSAD*CVYKPL
Trigger: TAAAGGTTTGTAAACACACCAATCAGCACTCTGTAA...GGGGGACTTTGATGACATGATGTTAAATCTTTCATCACAGTCCCACAGGTTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS GCA 90 bp CTGACTGGGGTGCAGCTGACCGGAGCGGGCTGCAGCGGGCCCGGGTaGCAAGGTGCCGTCTCAGCTGGGCGCCCTAGGGCCGTGTGTGCT +
Preference number: 5 (lower is better)
Translates to: LTGVQLTGAGCSGPG*QGAVSAGRPRAVCA
Trigger: AGCACACACGGCCCTAGGGCGCCCAGCTGAGACGGCACCTTGGCACCCGGGCCCGCTGCAGCCCGCTCCGGTCAGCTGCACCCCAGTCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426208.5
ENST00000679963.1
ENST00000680175.1
CDS GCA 90 bp CCGCTGGAAAGGCTCCTGACTGGGGTGCAGCTGACCGGAGCGGGCTaGAGCGGGCCCGGGTGCCAAGGTGCCGTCTCAGCTGGGCGCCCT +
Preference number: 5 (lower is better)
Translates to: PLERLLTGVQLTGAG*SGPGCQGAVSAGRP
Trigger: AGGGCGCCCAGCTGAGACGGCACCTTGGCACCCGGGCCCGCTGCAGCCCGCTCCGGTCAGCTGCACCCCAGTCAGGAGCCTTTCCAGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426208.5
ENST00000679963.1
ENST00000680175.1
CDS GCA 90 bp CTGTCCTCGCCCGCGCACCTCTCAGCTGGGCCTGCCCGCCCCGACTaGTCCAGATACAGCCGCCTCCGCCGTTGTGACACACCGGGAGGG +
Preference number: 5 (lower is better)
Translates to: LSSPAHLSAGPARPD*SRYSRLRRCDTPGG
Trigger: CCCTCCCGGTGTGTCACAACGGCGGAGGCGGCTGTATCTGGAGCAGTCGGGGCGGGCAGGCCCAGCTGAGAGGTGCGCGGGCGAGGACAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS GCA 90 bp CTGGGCGCCCTAGGGCCGTGTGTGCTTGGCAAGCTGCAGGGCCTCTaGTCCCAAAGCCTGTGCCTCCTGCCGCCAAGGCCCGCCTGGTTG +
Preference number: 5 (lower is better)
Translates to: LGALGPCVLGKLQGL*SQSLCLLPPRPAWL
Trigger: CAACCAGGCGGGCCTTGGCGGCAGGAGGCACAGGCTTTGGGAGCAGAGGCCCTGCAGCTTGCCAAGCACACACGGCCCTAGGGCGCCCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS CCA 90 bp CCCCAAACTTCCGTTCTCCTCCGACCCGCTGGAAAGGCTCCTGACTaGGGTGCAGCTGACCGGAGCGGGCTGCAGCGGGCCCGGGTGCCA +
Preference number: 5 (lower is better)
Translates to: PQTSVLLRPAGKAPD*GAADRSGLQRARVP
Trigger: TGGCACCCGGGCCCGCTGCAGCCCGCTCCGGTCAGCTGCACCCCAGTCAGGAGCCTTTCCAGCGGGTCGGAGGAGAACGGAAGTTTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426208.5
ENST00000679963.1
ENST00000680175.1
CDS CCA 90 bp TGCCAAGGTGCCGTCTCAGCTGGGCGCCCTAGGGCCGTGTGTGCTTaGCAAGCTGCAGGGCCTCTGCTCCCAAAGCCTGTGCCTCCTGCC +
Preference number: 5 (lower is better)
Translates to: CQGAVSAGRPRAVCA*QAAGPLLPKPVPPA
Trigger: GGCAGGAGGCACAGGCTTTGGGAGCAGAGGCCCTGCAGCTTGCCAAGCACACACGGCCCTAGGGCGCCCAGCTGAGACGGCACCTTGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR CAA 90 bp CCCAGGGAGGGCCTGATGAAGCTCAGTGTCCACTTAGCCCAGTCGTGCCACCCTCCAGCAGGCCATGTTTaGGGGCTGGACCCAGCCCGA +
Preference number: 5 (lower is better)
Translates to: PREGLMKLSVHLAQSCHPPAGHV*GLDPAR
Trigger: TCGGGCTGGGTCCAGCCCCAAAACATGGCCTGCTGG...AGGGTGGCACGACTGGGCTAAGTGGACACTGAGCTTCATCAGGCCCTCCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS CCA 90 bp GGCCTCTGCTCCCAAAGCCTGTGCCTCCTGCCGCCAAGGCCCGCCTaGTTGCTGGAGACGGAAATGAGATGGCATACACAGAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: GLCSQSLCLLPPRPA*LLETEMRWHTQSSW
Trigger: CCAGGAGCTCTGTGTATGCCATCTCATTTCCGTCTCCAGCAACCAGGCGGGCCTTGGCGGCAGGAGGCACAGGCTTTGGGAGCAGAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS GCA 90 bp CCACGTTCCAACACCGCCGGCGAGAGCAGCCTTCGTGACCCCAGCTaGCGGAGAAAGAAATGTAAAATGCAGCCAGGCGAATCGCGCGGG +
Preference number: 5 (lower is better)
Translates to: PRSNTAGESSLRDPS*RRKKCKMQPGESRG
Trigger: CCCGCGCGATTCGCCTGGCTGCATTTTACATTTCTTTCTCCGGCAGCTGGGGTCACGAAGGCTGCTCTCGCCGGCGGTGTTGGAACGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426208.5
ENST00000679963.1
ENST00000680175.1
CDS-3UTR CAA 90 bp GACACAAAGCTGCTCCTACCCAGGGAGGGCCTGATGAAGCTCAGTGTCCACTTAGCGACATTCACATCCTaGGGCACCACGTCGCCCCGG +
Preference number: 5 (lower is better)
Translates to: DTKLLLPREGLMKLSVHLATFTS*GTTSPR
Trigger: CCGGGGCGACGTGGTGCCCAAGGATGTGAATGTCGC...TAAGTGGACACTGAGCTTCATCAGGCCCTCCCTGGGTAGGAGCAGCTTTGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR CAA 90 bp CACCCGACCCAGAAGCCCAGCTGGCTTTGCCTCTCAGTACCACTGCTCTCCAGCCAGGGTTTCACTGCGTaGGCCAGGATGGTCTCAATC +
Preference number: 5 (lower is better)
Translates to: HPTQKPSWLCLSVPLLSSQGFTA*ARMVSI
Trigger: GATTGAGACCATCCTGGCCAACGCAGTGAAACCCTG...GCTGGAGAGCAGTGGTACTGAGAGGCAAAGCCAGCTGGGCTTCTGGGTCGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR CAA 90 bp ACCCACTCATGTGAACGTCCGCTCACCCCTGCCCCGGAATCTTCCCAGGCCCAGCAGCCCGATCTGGAATaGAAACTCCTGATTAGGCCT +
Preference number: 5 (lower is better)
Translates to: THSCERPLTPAPESSQAQQPDLE*KLLIRP
Trigger: AGGCCTAATCAGGAGTTTCAATTCCAGATCGGGCTG...CTGGGCCTGGGAAGATTCCGGGGCAGGGGTGAGCGGACGTTCACATGAGTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR CAA 90 bp CAGAGGACAGAGTGGAGCCAGCGCGGTATCACTTCTGTGCTGTTCCCATCGAAGCCAAGGCCCGCCTGGTaGCTGGAGACGGAAATGAGA +
Preference number: 5 (lower is better)
Translates to: QRTEWSQRGITSVLFPSKPRPAW*LETEMR
Trigger: TCTCATTTCCGTCTCCAGCAACCAGGCGGGCCTTGG...CTTCGATGGGAACAGCACAGAAGTGATACCGCGCTGGCTCCACTCTGTCCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR CAA 90 bp CCCAGGGAGGGCCTGATGAAGCTCAGTGTCCACTTAGCCCAGTCGTGCCACCCTCAGCCCGATCTGGAATaGAAACTCCTGATTAGGCCT +
Preference number: 5 (lower is better)
Translates to: PREGLMKLSVHLAQSCHPQPDLE*KLLIRP
Trigger: AGGCCTAATCAGGAGTTTCAATTCCAGATCGGGCTG...AGGGTGGCACGACTGGGCTAAGTGGACACTGAGCTTCATCAGGCCCTCCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR CAA 90 bp CAGTGGGGGAAAATGAGGCAGTCGGTGACCACTGCAAGCATAGTCAGGGTTCGTCGGGGAACACTGGAATaGCGTGCCACCAGAGGACAG +
Preference number: 5 (lower is better)
Translates to: QWGKMRQSVTTASIVRVRRGTLE*RATRGQ
Trigger: CTGTCCTCTGGTGGCACGCAATTCCAGTGTTCCCCG...ACGAACCCTGACTATGCTTGCAGTGGTCACCGACTGCCTCATTTTCCCCCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
CDS-3UTR CAA 90 bp TCATGTGAACGTCCGCTCACCCCTGCCCCGGAATCTTCCCAGGCCCAGATCTCCGTTGATCTTGCTAGCTaGAGCATCAAAAGTGCCGTC +
Preference number: 5 (lower is better)
Translates to: SCERPLTPAPESSQAQISVDLAS*SIKSAV
Trigger: GACGGCACTTTTGATGCTCAAGCTAGCAAGATCAAC...GGAGATCTGGGCCTGGGAAGATTCCGGGGCAGGGGTGAGCGGACGTTCACATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR CAA 90 bp CACCCGACCCAGAAGCCCAGCTGGCTTTGCCTCTCAGTACCACTGCTCTCCAGCGTTGATCTTGCTAGCTaGAGCATCAAAAGTGCCGTC +
Preference number: 5 (lower is better)
Translates to: HPTQKPSWLCLSVPLLSSVDLAS*SIKSAV
Trigger: GACGGCACTTTTGATGCTCAAGCTAGCAAGATCAAC...GCTGGAGAGCAGTGGTACTGAGAGGCAAAGCCAGCTGGGCTTCTGGGTCGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS CCA 90 bp GCCTGGTTGCTGGAGACGGAAATGAGATGGCATACACAGAGCTCCTaGTACAGGCAGGTGCTGAAGACTGTTCCCGTTTTTACCCTCTCC +
Preference number: 5 (lower is better)
Translates to: AWLLETEMRWHTQSS*YRQVLKTVPVFTLS
Trigger: GGAGAGGGTAAAAACGGGAACAGTCTTCAGCACCTGCCTGTACCAGGAGCTCTGTGTATGCCATCTCATTTCCGTCTCCAGCAACCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR CAA 90 bp TCATGTGAACGTCCGCTCACCCCTGCCCCGGAATCTTCCCAGGCCCAGATCTCCGAGTGTTCTGTTCTCTaGAACATGTGCTTTGAATGG +
Preference number: 5 (lower is better)
Translates to: SCERPLTPAPESSQAQISECSVL*NMCFEW
Trigger: CCATTCAAAGCACATGTTCAAGAGAACAGAACACTC...GGAGATCTGGGCCTGGGAAGATTCCGGGGCAGGGGTGAGCGGACGTTCACATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR CAA 90 bp CCAGAGGACAGAGTGGAGCCAGCGCGGTATCACTTCTGTGCTGTTCCCATCGAAGTTGATCTTGCTAGCTaGAGCATCAAAAGTGCCGTC +
Preference number: 5 (lower is better)
Translates to: PEDRVEPARYHFCAVPIEVDLAS*SIKSAV
Trigger: GACGGCACTTTTGATGCTCAAGCTAGCAAGATCAAC...TTCGATGGGAACAGCACAGAAGTGATACCGCGCTGGCTCCACTCTGTCCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR CAA 90 bp AAAGGTGATTGGCAGTGGGGGAAAATGAGGCAGTCGGTGACCACTGCAAGCATAACTGGATCCTTTGGCTaGAAGCCTGTGGGACACCAG +
Preference number: 5 (lower is better)
Translates to: KGDWQWGKMRQSVTTASITGSFG*KPVGHQ
Trigger: CTGGTGTCCCACAGGCTTCAAGCCAAAGGATCCAGT...TATGCTTGCAGTGGTCACCGACTGCCTCATTTTCCCCCACTGCCAATCACCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS-3UTR CAA 90 bp GACACAAAGCTGCTCCTACCCAGGGAGGGCCTGATGAAGCTCAGTGTCCACTTAGTTGATCTTGCTAGCTaGAGCATCAAAAGTGCCGTC +
Preference number: 5 (lower is better)
Translates to: DTKLLLPREGLMKLSVHLVDLAS*SIKSAV
Trigger: GACGGCACTTTTGATGCTCAAGCTAGCAAGATCAAC...TAAGTGGACACTGAGCTTCATCAGGCCCTCCCTGGGTAGGAGCAGCTTTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR CAA 90 bp CTCAACTGGTTTGAACTAGGCAGGAGCTGCCCCAAGTTCCTGAAAAACAATTTGCGGGGAACACTGGAATaGCGTGCCACCAGAGGACAG +
Preference number: 5 (lower is better)
Translates to: LNWFELGRSCPKFLKNNLRGTLE*RATRGQ
Trigger: CTGTCCTCTGGTGGCACGCAATTCCAGTGTTCCCCG...CAAATTGTTTTTCAGGAACTTGGGGCAGCTCCTGCCTAGTTCAAACCAGTTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
CDS TCA 90 bp GGGGCATTCTGCAGATCAGCTGGTCTGCCATCTTCAAACGATTCATaGAAATCAAAGACAGCTTTGAGGAACGGCTCCAGACTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: GAFCRSAGLPSSNDS*KSKTALRNGSRLAE
Trigger: CTCTGCCAGTCTGGAGCCGTTCCTCAAAGCTGTCTTTGATTTTCATGAATCGTTTGAAGATGGCAGACCAGCTGATCTGCAGAATGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
CDS GCA 90 bp GTTGCAAAGATGAAGCAAGGGGCTAATTCCAAACCACAAGATTCCTaGACTGGTGAAGAAGGCCCAAGGAAGAACTGGCGATCATGGCAG +
Preference number: 5 (lower is better)
Translates to: VAKMKQGANSKPQDS*TGEEGPRKNWRSWQ
Trigger: CTGCCATGATCGCCAGTTCTTCCTTGGGCCTTCTTCACCAGTGCAGGAATCTTGTGGTTTGGAATTAGCCCCTTGCTTCATCTTTGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679481.1
CDS CCA 90 bp GCGGGTCCTGGCCAACCCAAATCGAGGGGCATTCTGCAGATCAGCTaGTCTGCCATCTTCAAACGATTCATGAAAATCAAAGACAGCTTT +
Preference number: 5 (lower is better)
Translates to: AGPGQPKSRGILQIS*SAIFKRFMKIKDSF
Trigger: AAAGCTGTCTTTGATTTTCATGAATCGTTTGAAGATGGCAGACCAGCTGATCTGCAGAATGCCCCTCGATTTGGGTTGGCCAGGACCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
CDS-3UTR CAA 90 bp AGGCTGGGGCGGGGAGAGTGTTCTGTTCTCTTGAACATGTGCTTTGAATGGCACGAGTGTTCTGTTCTCTaGAACATGTGCTTTGAATGG +
Preference number: 5 (lower is better)
Translates to: RLGRGECSVLLNMCFEWHECSVL*NMCFEW
Trigger: CCATTCAAAGCACATGTTCAAGAGAACAGAACACTC...GTGCCATTCAAAGCACATGTTCAAGAGAACAGAACACTCTCCCCGCCCCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330423.8
ENST00000416740.2
CDS-3UTR CAA 90 bp AGCAGAGCCTCAGTAACCTGTGGGACTGTGATGAAAGATTTAACATCATGTCATGAAGCCCAGCTGGCTTaGCCTCTCAGTACCACTGCT +
Preference number: 5 (lower is better)
Translates to: SRASVTCGTVMKDLTSCHEAQLA*PLSTTA
Trigger: AGCAGTGGTACTGAGAGGCAAAGCCAGCTGGGCTTC...ATGACATGATGTTAAATCTTTCATCACAGTCCCACAGGTTACTGAGGCTCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS-3UTR CAA 90 bp AAAGGTGATTGGCAGTGGGGGAAAATGAGGCAGTCGGTGACCACTGCAAGCATAAAAAGGCCACTTCTTTaGTTTGCACAAGCCTACTTG +
Preference number: 5 (lower is better)
Translates to: KGDWQWGKMRQSVTTASIKRPLL*FAQAYL
Trigger: CAAGTAGGCTTGTGCAAACAAAAGAAGTGGCCTTTT...TATGCTTGCAGTGGTCACCGACTGCCTCATTTTCCCCCACTGCCAATCACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
CDS GCA 72 bp GTGCAGCTGACCGGAGCGGGCTGCAGCGGGCCCGGGTaGCAAGGTGCCGTCTCAGCTGGGCGCCCTAGGGCC +
Preference number: 6 (lower is better)
Translates to: VQLTGAGCSGPG*QGAVSAGRPRA
Trigger: GGCCCTAGGGCGCCCAGCTGAGACGGCACCTTGGCACCCGGGCCCGCTGCAGCCCGCTCCGGTCAGCTGCAC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426208.5
ENST00000679963.1
ENST00000680175.1
CDS GCA 72 bp GCCGCTGTCCTCGCCCGCGCACCTCTCAGCTGGGCCTaGCCGCCCCGACTGCTCCAGATACAGCCGCCTCCG +
Preference number: 6 (lower is better)
Translates to: AAVLARAPLSWA*PPRLLQIQPPP
Trigger: CGGAGGCGGCTGTATCTGGAGCAGTCGGGGCGGGCAGGCCCAGCTGAGAGGTGCGCGGGCGAGGACAGCGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS GCA 72 bp AGGCTCCTGACTGGGGTGCAGCTGACCGGAGCGGGCTaGAGCGGGCCCGGGTGCCAAGGTGCCGTCTCAGCT +
Preference number: 6 (lower is better)
Translates to: RLLTGVQLTGAG*SGPGCQGAVSA
Trigger: AGCTGAGACGGCACCTTGGCACCCGGGCCCGCTGCAGCCCGCTCCGGTCAGCTGCACCCCAGTCAGGAGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426208.5
ENST00000679963.1
ENST00000680175.1
CDS GCA 72 bp CCCGCGCACCTCTCAGCTGGGCCTGCCCGCCCCGACTaGTCCAGATACAGCCGCCTCCGCCGTTGTGACACA +
Preference number: 6 (lower is better)
Translates to: PAHLSAGPARPD*SRYSRLRRCDT
Trigger: TGTGTCACAACGGCGGAGGCGGCTGTATCTGGAGCAGTCGGGGCGGGCAGGCCCAGCTGAGAGGTGCGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS CCA 72 bp TCCGTTCTCCTCCGACCCGCTGGAAAGGCTCCTGACTaGGGTGCAGCTGACCGGAGCGGGCTGCAGCGGGCC +
Preference number: 6 (lower is better)
Translates to: SVLLRPAGKAPD*GAADRSGLQRA
Trigger: GGCCCGCTGCAGCCCGCTCCGGTCAGCTGCACCCCAGTCAGGAGCCTTTCCAGCGGGTCGGAGGAGAACGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426208.5
ENST00000679963.1
ENST00000680175.1
CDS GCA 72 bp GGCGCTCGCAGCGGGGACTGCGCCCGCGGGGGAGGCTaGCCTATTACCAAAGCGCACGTGTCCACGTTCCAA +
Preference number: 6 (lower is better)
Translates to: GARSGDCARGGG*PITKAHVSTFQ
Trigger: TTGGAACGTGGACACGTGCGCTTTGGTAATAGGGCAGCCTCCCCCGCGGGCGCAGTCCCCGCTGCGAGCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680175.1
CDS GCA 72 bp CTAGGGCCGTGTGTGCTTGGCAAGCTGCAGGGCCTCTaGTCCCAAAGCCTGTGCCTCCTGCCGCCAAGGCCC +
Preference number: 6 (lower is better)
Translates to: LGPCVLGKLQGL*SQSLCLLPPRP
Trigger: GGGCCTTGGCGGCAGGAGGCACAGGCTTTGGGAGCAGAGGCCCTGCAGCTTGCCAAGCACACACGGCCCTAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS GCA 72 bp CGTGGACTGATATGCATTCCCGCTCTCAGCTGGGCCTaGCCGCCCCGACTGCTCCAGATACAGCCGCCTCCG +
Preference number: 6 (lower is better)
Translates to: RGLICIPALSWA*PPRLLQIQPPP
Trigger: CGGAGGCGGCTGTATCTGGAGCAGTCGGGGCGGGCAGGCCCAGCTGAGAGCGGGAATGCATATCAGTCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316027.10
CDS CAA 90 bp CTCTGCTCCCAAAGCCTGTGCCTCCTGCCGCCAAGGCCCGCCTGGTaGCTGGAGACGGAAATGAGATGGCATACACAGAGCTCCTGGTAC +
Preference number: 6 (lower is better)
Translates to: LCSQSLCLLPPRPAW*LETEMRWHTQSSWY
Trigger: GTACCAGGAGCTCTGTGTATGCCATCTCATTTCCGTCTCCAGCAACCAGGCGGGCCTTGGCGGCAGGAGGCACAGGCTTTGGGAGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS TCA 72 bp TGCCGCCAAGGCCCGCCTGGTTGCTGGAGACGGAAATaGGATGGCATACACAGAGCTCCTGGTACAGGCAGG +
Preference number: 6 (lower is better)
Translates to: CRQGPPGCWRRK*DGIHRAPGTGR
Trigger: CCTGCCTGTACCAGGAGCTCTGTGTATGCCATCTCATTTCCGTCTCCAGCAACCAGGCGGGCCTTGGCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS CCA 72 bp TCCCAAAGCCTGTGCCTCCTGCCGCCAAGGCCCGCCTaGTTGCTGGAGACGGAAATGAGATGGCATACACAG +
Preference number: 6 (lower is better)
Translates to: SQSLCLLPPRPA*LLETEMRWHTQ
Trigger: CTGTGTATGCCATCTCATTTCCGTCTCCAGCAACCAGGCGGGCCTTGGCGGCAGGAGGCACAGGCTTTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS CAA 72 bp CAAAGCCTGTGCCTCCTGCCGCCAAGGCCCGCCTGGTaGCTGGAGACGGAAATGAGATGGCATACACAGAGC +
Preference number: 6 (lower is better)
Translates to: QSLCLLPPRPAW*LETEMRWHTQS
Trigger: GCTCTGTGTATGCCATCTCATTTCCGTCTCCAGCAACCAGGCGGGCCTTGGCGGCAGGAGGCACAGGCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS GCA 72 bp AACACCGCCGGCGAGAGCAGCCTTCGTGACCCCAGCTaGCGGAGAAAGAAATGTAAAATGCAGCCAGGCGAA +
Preference number: 6 (lower is better)
Translates to: NTAGESSLRDPS*RRKKCKMQPGE
Trigger: TTCGCCTGGCTGCATTTTACATTTCTTTCTCCGGCAGCTGGGGTCACGAAGGCTGCTCTCGCCGGCGGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426208.5
ENST00000679963.1
ENST00000680175.1
CDS CCA 72 bp GATTCCTGCACTGGTGAAGAAGGCCCAAGGAAGAACTaGCGATCATGGCAGAAACTCTCCTTCAGCCTACGC +
Preference number: 6 (lower is better)
Translates to: DSCTGEEGPRKN*RSWQKLSFSLR
Trigger: GCGTAGGCTGAAGGAGAGTTTCTGCCATGATCGCCAGTTCTTCCTTGGGCCTTCTTCACCAGTGCAGGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679481.1
CDS TCA 72 bp GTGGTGAAGGAGTCATCATCGTTGATCTTGCTAGCTTaGGCATCAAAAGTGCCGTCTGCCTGGATGCCGTGT +
Preference number: 6 (lower is better)
Translates to: VVKESSSLILLA*ASKVPSAWMPC
Trigger: ACACGGCATCCAGGCAGACGGCACTTTTGATGCTCAAGCTAGCAAGATCAACGATGATGACTCCTTCACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316027.10
ENST00000330423.8
ENST00000416740.2
ENST00000426208.5
ENST00000679481.1
ENST00000679963.1
ENST00000680175.1
CDS CCA 72 bp CTGGAGACGGAAATGAGATGGCATACACAGAGCTCCTaGTACAGGCAGGTGCTGAAGACTGTTCCCGTTTTT +
Preference number: 6 (lower is better)
Translates to: LETEMRWHTQSS*YRQVLKTVPVF
Trigger: AAAAACGGGAACAGTCTTCAGCACCTGCCTGTACCAGGAGCTCTGTGTATGCCATCTCATTTCCGTCTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679963.1
CDS GCA 72 bp ATGAAGCAAGGGGCTAATTCCAAACCACAAGATTCCTaGACTGGTGAAGAAGGCCCAAGGAAGAACTGGCGA +
Preference number: 6 (lower is better)
Translates to: MKQGANSKPQDS*TGEEGPRKNWR
Trigger: TCGCCAGTTCTTCCTTGGGCCTTCTTCACCAGTGCAGGAATCTTGTGGTTTGGAATTAGCCCCTTGCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679481.1
CDS CCA 72 bp GGCCAACCCAAATCGAGGGGCATTCTGCAGATCAGCTaGTCTGCCATCTTCAAACGATTCATGAAAATCAAA +
Preference number: 6 (lower is better)
Translates to: GQPKSRGILQIS*SAIFKRFMKIK
Trigger: TTTGATTTTCATGAATCGTTTGAAGATGGCAGACCAGCTGATCTGCAGAATGCCCCTCGATTTGGGTTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
CDS TCA 72 bp TGCAGATCAGCTGGTCTGCCATCTTCAAACGATTCATaGAAATCAAAGACAGCTTTGAGGAACGGCTCCAGA +
Preference number: 6 (lower is better)
Translates to: CRSAGLPSSNDS*KSKTALRNGSR
Trigger: TCTGGAGCCGTTCCTCAAAGCTGTCTTTGATTTTCATGAATCGTTTGAAGATGGCAGACCAGCTGATCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1
CDS GCA 72 bp ACCCAAATCGAGGGGCATTCTGCAGATCAGCTGGTCTaGCATCTTCAAACGATTCATGAAAATCAAAGACAG +
Preference number: 6 (lower is better)
Translates to: TQIEGHSADQLV*HLQTIHENQRQ
Trigger: CTGTCTTTGATTTTCATGAATCGTTTGAAGATGGCAGACCAGCTGATCTGCAGAATGCCCCTCGATTTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608634.1
ENST00000679963.1