Pregenerated sensors for TUBA4B (Homo sapiens)
Ensembl gene IDs: ENSG00000243910Ensembl transcript IDs: ENST00000473885.5, ENST00000485041.5, ENST00000490341.3
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AAGGCCACAGCACTTTATGTAGGACAGACACACAGTATTCCCCTAGTATTCATCATGCACATGGCACGTTaGACTTTACCAGGTCACTCC | + |
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Preference number: 2 (lower is better) Translates to: KATALYVGQTHSIPLVFIMHMAR*TLPGHS Trigger: GGAGTGACCTGGTAAAGTGCAACGTGCCATGTGCAT...GATGAATACTAGGGGAATACTGTGTGTCTGTCCTACATAAAGTGCTGTGGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490341.3 |
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| 3UTR-3UTR CAA 90 bp | AAGGCCACAGCACTTTATGTAGGACAGACACACAGTATTCCCCTAGTATTCATCCATGCACATGGCACGTaGCACTTTACCAGGTCACTC | + |
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Preference number: 3 (lower is better) Translates to: KATALYVGQTHSIPLVFIHAHGT*HFTRSL Trigger: GAGTGACCTGGTAAAGTGCAACGTGCCATGTGCATG...GATGAATACTAGGGGAATACTGTGTGTCTGTCCTACATAAAGTGCTGTGGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490341.3 |
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| CDS-3UTR TCA 90 bp | AAGGCCACAGCACTTTATGTAGGACAGACACACAGTATTCCCCTAGTATTCATCCGGGGTTCGGCCTCCTaGAGCGAGCTGGCCCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: KATALYVGQTHSIPLVFIRGSAS*SELALS Trigger: GGAGAGGGCCAGCTCGCTTCAGGAGGCCGAACCCCG...GATGAATACTAGGGGAATACTGTGTGTCTGTCCTACATAAAGTGCTGTGGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000490341.3 |
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| CDS-3UTR TCA 90 bp | AAGGCCACAGCACTTTATGTAGGACAGACACACAGTATTCCCCTAGTATTCATCACCCCGCGTCTGAGCTaGGAGGGTTGGTGGGAACGG | + |
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Preference number: 4 (lower is better) Translates to: KATALYVGQTHSIPLVFITPRLS*EGWWER Trigger: CCGTTCCCACCAACCCTCTCAGCTCAGACGCGGGGT...GATGAATACTAGGGGAATACTGTGTGTCTGTCCTACATAAAGTGCTGTGGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000490341.3 |
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| CDS-3UTR TCA 90 bp | AAGGCCACAGCACTTTATGTAGGACAGACACACAGTATTCCCCTAGTATTCATCTCAGCACCCCGCGTCTaGGCTGAGAGGGTTGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: KATALYVGQTHSIPLVFISAPRV*AERVGG Trigger: CCCACCAACCCTCTCAGCTCAGACGCGGGGTGCTGA...GATGAATACTAGGGGAATACTGTGTGTCTGTCCTACATAAAGTGCTGTGGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000490341.3 |
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| CDS-3UTR CCA 90 bp | AAGGCCACAGCACTTTATGTAGGACAGACACACAGTATTCCCCTAGTATTCATCCCTCCTGAAGCGAGCTaGCCCTCTCCAGCCGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: KATALYVGQTHSIPLVFIPPEAS*PSPAEA Trigger: GGCTTCGGCTGGAGAGGGCCAGCTCGCTTCAGGAGG...GATGAATACTAGGGGAATACTGTGTGTCTGTCCTACATAAAGTGCTGTGGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490341.3 |
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| CDS-3UTR CCA 90 bp | AAGGCCACAGCACTTTATGTAGGACAGACACACAGTATTCCCCTAGTATTCATCATGTGCCATGCTGCCTaGACAGGGGCTGGCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: KATALYVGQTHSIPLVFIMCHAA*TGAGWG Trigger: ACCCCAGCCAGCCCCTGTCCAGGCAGCATGGCACAT...GATGAATACTAGGGGAATACTGTGTGTCTGTCCTACATAAAGTGCTGTGGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000490341.3 |
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| CDS-3UTR CCA 90 bp | AAGGCCACAGCACTTTATGTAGGACAGACACACAGTATTCCCCTAGTATTCATCTGCCTGGACAGGGGCTaGCTGGGGTCTTGTCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: KATALYVGQTHSIPLVFICLDRG*LGSCLS Trigger: AGAGAGACAAGACCCCAGCCAGCCCCTGTCCAGGCA...GATGAATACTAGGGGAATACTGTGTGTCTGTCCTACATAAAGTGCTGTGGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000490341.3 |
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| CDS-3UTR GCA 90 bp | AAGGCCACAGCACTTTATGTAGGACAGACACACAGTATTCCCCTAGTATTCATCCTCTCTGTCTGCTGGTaGCGCATCCCCCTTTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: KATALYVGQTHSIPLVFILSVCW*RIPLSS Trigger: AGAGGAAAGGGGGATGCGGCACCAGCAGACAGAGAG...GATGAATACTAGGGGAATACTGTGTGTCTGTCCTACATAAAGTGCTGTGGCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000490341.3 |
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| CDS-3UTR GCA 90 bp | AAGGCCACAGCACTTTATGTAGGACAGACACACAGTATTCCCCTAGTATTCATCAGATCTGGCGGTATGTaGCATGCTGCCTGGACAGGG | + |
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Preference number: 4 (lower is better) Translates to: KATALYVGQTHSIPLVFIRSGGM*HAAWTG Trigger: CCCTGTCCAGGCAGCATGGCACATACCGCCAGATCT...GATGAATACTAGGGGAATACTGTGTGTCTGTCCTACATAAAGTGCTGTGGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490341.3 |
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| CDS-3UTR CCA 90 bp | AAGGCCACAGCACTTTATGTAGGACAGACACACAGTATTCCCCTAGTATTCATCTGTCTCTCTGTCTGCTaGTGCCGCATCCCCCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: KATALYVGQTHSIPLVFICLSVC*CRIPLS Trigger: GGAAAGGGGGATGCGGCACCAGCAGACAGAGAGACA...GATGAATACTAGGGGAATACTGTGTGTCTGTCCTACATAAAGTGCTGTGGCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000490341.3 |
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| CDS-3UTR TCA 90 bp | AAGGCCACAGCACTTTATGTAGGACAGACACACAGTATTCCCCTAGTATTCATCCCAGTAGCAGGTCGATaGACTCCTTCCCAATGGTGT | + |
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Preference number: 4 (lower is better) Translates to: KATALYVGQTHSIPLVFIPVAGR*TPSQWC Trigger: ACACCATTGGGAAGGAGTTCATCGACCTGCTACTGG...GATGAATACTAGGGGAATACTGTGTGTCTGTCCTACATAAAGTGCTGTGGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490341.3 |
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| CDS-3UTR GCA 90 bp | AAGGCCACAGCACTTTATGTAGGACAGACACACAGTATTCCCCTAGTATTCATCCCTTTCCTCTGTGTATaGATTCCAACTATCCACAGA | + |
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Preference number: 4 (lower is better) Translates to: KATALYVGQTHSIPLVFIPFLCV*IPTIHR Trigger: TCTGTGGATAGTTGGAATGCATACACAGAGGAAAGG...GATGAATACTAGGGGAATACTGTGTGTCTGTCCTACATAAAGTGCTGTGGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490341.3 |
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| CDS CCA 90 bp | GAGGCAAGCTCTGGGCCTGCACCCAAACAGGGGAGCCAGCTGAGGTaGGCAGAGGAGGGGCCAGGGCTAGTAACTCCACACAGGTATCCA | + |
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Preference number: 5 (lower is better) Translates to: EASSGPAPKQGSQLR*AEEGPGLVTPHRYP Trigger: TGGATACCTGTGTGGAGTTACTAGCCCTGGCCCCTCCTCTGCCCACCTCAGCTGGCTCCCCTGTTTGGGTGCAGGCCCAGAGCTTGCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000473885.5 ENST00000485041.5 |
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| CDS GCA 90 bp | GCATGCTGCCTGGACAGGGGCTGGCTGGGGTCTTGTCTCTCTGTCTaGTGCAGGATAGTGAGCAGGGATAGATCTGTGAGAGGCCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: ACCLDRGWLGSCLSV*CRIVSRDRSVRGLQ Trigger: CTGCAGGCCTCTCACAGATCTATCCCTGCTCACTATCCTGCAGCAGACAGAGAGACAAGACCCCAGCCAGCCCCTGTCCAGGCAGCATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473885.5 |
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| CDS GCA 90 bp | TCATGCTGCCTGGACAGGGGCTGGCTGGGGTCTTGTCTCTCTGTCTaGTGCAGGATAGTGAGCAGGGATAGATCTGTGAGAGGCCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: SCCLDRGWLGSCLSV*CRIVSRDRSVRGLQ Trigger: CTGCAGGCCTCTCACAGATCTATCCCTGCTCACTATCCTGCAGCAGACAGAGAGACAAGACCCCAGCCAGCCCCTGTCCAGGCAGCATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485041.5 |
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| CDS CCA 90 bp | GTGGATGTTGTTAGAAACGGCCTGGGAGGGCAGGGCCTGTTGACTTaGTCACAGAGTACGAGGCAAGCTCTGGGCCTGCACCCAAACAGG | + |
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Preference number: 5 (lower is better) Translates to: VDVVRNGLGGQGLLT*SQSTRQALGLHPNR Trigger: CCTGTTTGGGTGCAGGCCCAGAGCTTGCCTCGTACTCTGTGACCAAGTCAACAGGCCCTGCCCTCCCAGGCCGTTTCTAACAACATCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000473885.5 ENST00000485041.5 |
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| CDS CCA 90 bp | GAGGAGGGGCCAGGGCTAGTAACTCCACACAGGTATCCAGGCCTCTaGGTACATGGTATCTGTTGTCAGTCACGCAATCCCATTTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: EEGPGLVTPHRYPGL*VHGICCQSRNPISW Trigger: CCAGGAAATGGGATTGCGTGACTGACAACAGATACCATGTACCCAGAGGCCTGGATACCTGTGTGGAGTTACTAGCCCTGGCCCCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000473885.5 ENST00000485041.5 |
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| CDS-3UTR CAA 90 bp | AAGGCCACAGCACTTTATGTAGGACAGACACACAGTATTCCCCTAGTATTCATCTCTGAGCTGAGAGGGTaGGTGGGAACGGGGTTCGGC | + |
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Preference number: 5 (lower is better) Translates to: KATALYVGQTHSIPLVFISELRG*VGTGFG Trigger: GCCGAACCCCGTTCCCACCAACCCTCTCAGCTCAGA...GATGAATACTAGGGGAATACTGTGTGTCTGTCCTACATAAAGTGCTGTGGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000490341.3 |
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| CDS CCA 72 bp | GTTGGTGGGAACGGGGTTCGGCCTCCTGAAGCGAGCTaGCCCTCTCCAGCCGAAGCCCGGGTGCGCGGATGG | + |
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Preference number: 6 (lower is better) Translates to: VGGNGVRPPEAS*PSPAEARVRGW Trigger: CCATCCGCGCACCCGGGCTTCGGCTGGAGAGGGCCAGCTCGCTTCAGGAGGCCGAACCCCGTTCCCACCAAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000473885.5 ENST00000485041.5 ENST00000490341.3 |
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| CDS CAA 72 bp | CCCGTGACTCAGCACCCCGCGTCTGAGCTGAGAGGGTaGGTGGGAACGGGGTTCGGCCTCCTGAAGCGAGCT | + |
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Preference number: 6 (lower is better) Translates to: PVTQHPASELRG*VGTGFGLLKRA Trigger: AGCTCGCTTCAGGAGGCCGAACCCCGTTCCCACCAACCCTCTCAGCTCAGACGCGGGGTGCTGAGTCACGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000473885.5 ENST00000485041.5 ENST00000490341.3 |
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| CDS CCA 72 bp | TCTGGGCCTGCACCCAAACAGGGGAGCCAGCTGAGGTaGGCAGAGGAGGGGCCAGGGCTAGTAACTCCACAC | + |
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Preference number: 6 (lower is better) Translates to: SGPAPKQGSQLR*AEEGPGLVTPH Trigger: GTGTGGAGTTACTAGCCCTGGCCCCTCCTCTGCCCACCTCAGCTGGCTCCCCTGTTTGGGTGCAGGCCCAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000473885.5 ENST00000485041.5 |
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| CDS CCA 72 bp | GTTAGAAACGGCCTGGGAGGGCAGGGCCTGTTGACTTaGTCACAGAGTACGAGGCAAGCTCTGGGCCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: VRNGLGGQGLLT*SQSTRQALGLH Trigger: GTGCAGGCCCAGAGCTTGCCTCGTACTCTGTGACCAAGTCAACAGGCCCTGCCCTCCCAGGCCGTTTCTAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000473885.5 ENST00000485041.5 |
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| CDS CCA 72 bp | CCTCCTCCTTATACTCGCTGGGTGGCTCTCAGCAGGTaGATGTTGTTAGAAACGGCCTGGGAGGGCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: PPPYTRWVALSR*MLLETAWEGRA Trigger: GGCCCTGCCCTCCCAGGCCGTTTCTAACAACATCCACCTGCTGAGAGCCACCCAGCGAGTATAAGGAGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000473885.5 ENST00000485041.5 |
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| CDS CAA 90 bp | CAGCAGGTGGATGTTGTTAGAAACGGCCTGGGAGGGCAGGGCCTGTaGACTTGGTCACAGAGTACGAGGCAAGCTCTGGGCCTGCACCCA | + |
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Preference number: 6 (lower is better) Translates to: QQVDVVRNGLGGQGL*TWSQSTRQALGLHP Trigger: TGGGTGCAGGCCCAGAGCTTGCCTCGTACTCTGTGACCAAGTCAACAGGCCCTGCCCTCCCAGGCCGTTTCTAACAACATCCACCTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000473885.5 ENST00000485041.5 |
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| CDS CAA 72 bp | GATGTTGTTAGAAACGGCCTGGGAGGGCAGGGCCTGTaGACTTGGTCACAGAGTACGAGGCAAGCTCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: DVVRNGLGGQGL*TWSQSTRQALG Trigger: GCCCAGAGCTTGCCTCGTACTCTGTGACCAAGTCAACAGGCCCTGCCCTCCCAGGCCGTTTCTAACAACATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000473885.5 ENST00000485041.5 |
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| CDS CCA 72 bp | CCAGGGCTAGTAACTCCACACAGGTATCCAGGCCTCTaGGTACATGGTATCTGTTGTCAGTCACGCAATCCC | + |
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Preference number: 6 (lower is better) Translates to: PGLVTPHRYPGL*VHGICCQSRNP Trigger: GGGATTGCGTGACTGACAACAGATACCATGTACCCAGAGGCCTGGATACCTGTGTGGAGTTACTAGCCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000473885.5 ENST00000485041.5 |
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