Pregenerated sensors for TUBA1C (Homo sapiens)
Ensembl gene IDs: ENSG00000167553Ensembl transcript IDs: ENST00000301072.11, ENST00000541364.5, ENST00000549183.1, ENST00000549554.1, ENST00000549818.5, ENST00000550574.1, ENST00000552125.1, ENST00000552448.1
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGCACTTGAATTTTGGCTCCAGCAGTTACTGTTATCTAACCCTTTaGTACTGTACATGTGGTCACATCAGACCAACAGCATCATTTGGG | + |
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Preference number: 1 (lower is better) Translates to: GHLNFGSSSYCYLTL*YCTCGHIRPTASFG Trigger: CCCAAATGATGCTGTTGGTCTGATGTGACCACATGTACAGTAGCAAAGGGTTAGATAACAGTAACTGCTGGAGCCAAAATTCAAGTGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| 3UTR TCA 90 bp | AGAGAAGCACTGGCTCAATCTGAACCCGTTTCCTCACTTACAAAATaGTTCTATAACCACTTAATTCAGGCCCAAATTAAACAGATAAAC | + |
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Preference number: 1 (lower is better) Translates to: REALAQSEPVSSLTK*FYNHLIQAQIKQIN Trigger: GTTTATCTGTTTAATTTGGGCCTGAATTAAGTGGTTATAGAATCATTTTGTAAGTGAGGAAACGGGTTCAGATTGAGCCAGTGCTTCTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| 3UTR-3UTR CCA 90 bp | ACTGACAGCAATAGTTCTGGCAGTGTGGCTGGGCACTTGAATTTTGGCTCCAGCGCTGAGGTGGGAGGATaGCTTAGCCCAGGTCAAGGT | + |
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Preference number: 2 (lower is better) Translates to: TDSNSSGSVAGHLNFGSSAEVGG*LSPGQG Trigger: ACCTTGACCTGGGCTAAGCCATCCTCCCACCTCAGC...GCTGGAGCCAAAATTCAAGTGCCCAGCCACACTGCCAGAACTATTGCTGTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| 3UTR-3UTR TCA 90 bp | ATGCAGTGGTGCAATCATGGCTCACTACCTCAACCTCCTTGGGCTCAGGTGGTCAGCTCGAGGCTGCAATaGGCTATGTATTATCATGCC | + |
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Preference number: 2 (lower is better) Translates to: MQWCNHGSLPQPPWAQVVSSRLQ*AMYYHA Trigger: GGCATGATAATACATAGCTCATTGCAGCCTCGAGCT...GACCACCTGAGCCCAAGGAGGTTGAGGTAGTGAGCCATGATTGCACCACTGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| 3UTR-3UTR TCA 90 bp | AAGACTGACAGCAATAGTTCTGGCAGTGTGGCTGGGCACTTGAATTTTGGCTCCAGCAGGAGAATCACATaGGTCCAGGAGCTCGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: KTDSNSSGSVAGHLNFGSSRRIT*VQELEA Trigger: AGCCTCGAGCTCCTGGACTCATGTGATTCTCCTGCT...GGAGCCAAAATTCAAGTGCCCAGCCACACTGCCAGAACTATTGCTGTCAGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| 3UTR-3UTR TCA 90 bp | AAGACTGACAGCAATAGTTCTGGCAGTGTGGCTGGGCACTTGAATTTTGGCTCCTCACTTGAAGCCAGTTaGAGACCACCCTGGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: KTDSNSSGSVAGHLNFGSSLEAS*RPPWAA Trigger: TGCTGCCCAGGGTGGTCTTCAACTGGCTTCAAGTGA...GGAGCCAAAATTCAAGTGCCCAGCCACACTGCCAGAACTATTGCTGTCAGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| 3UTR-3UTR GCA 90 bp | ACTGACAGCAATAGTTCTGGCAGTGTGGCTGGGCACTTGAATTTTGGCTCCAGCATGGTGCCATTGCACTaGAGCCTGGGAAAGAGACCA | + |
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Preference number: 2 (lower is better) Translates to: TDSNSSGSVAGHLNFGSSMVPLH*SLGKRP Trigger: TGGTCTCTTTCCCAGGCTGCAGTGCAATGGCACCAT...GCTGGAGCCAAAATTCAAGTGCCCAGCCACACTGCCAGAACTATTGCTGTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| 3UTR-3UTR CCA 90 bp | ACTGACAGCAATAGTTCTGGCAGTGTGGCTGGGCACTTGAATTTTGGCTCCAGCGACCCTCGACTCAGGTaGTTTCATCTACCAGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: TDSNSSGSVAGHLNFGSSDPRLR*FHLPAS Trigger: TGAGGCTGGTAGATGAAACCACCTGAGTCGAGGGTC...GCTGGAGCCAAAATTCAAGTGCCCAGCCACACTGCCAGAACTATTGCTGTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| 3UTR-3UTR GCA 90 bp | GCTGGGCACTTGAATTTTGGCTCCAGCAGTTACTGTTATCTAACCCTTTGCTACCTTGGCCTCCCGAAGTaGATGAGCCACCAGGTTGAC | + |
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Preference number: 2 (lower is better) Translates to: AGHLNFGSSSYCYLTLCYLGLPK*MSHQVD Trigger: GTCAACCTGGTGGCTCATGCACTTCGGGAGGCCAAG...GTAGCAAAGGGTTAGATAACAGTAACTGCTGGAGCCAAAATTCAAGTGCCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| 3UTR-3UTR CCA 90 bp | GTGGTCCTCCCACCTATAGGCAGGTGCCATCACAGCATGCAAATTTTTGTTTTGGTGATCCACCCAACTTaGCCTCCCGAAGTGCATGAG | + |
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Preference number: 2 (lower is better) Translates to: VVLPPIGRCHHSMQIFVLVIHPT*PPEVHE Trigger: CTCATGCACTTCGGGAGGCCAAGTTGGGTGGATCAC...CAAAACAAAAATTTGCATGCTGTGATGGCACCTGCCTATAGGTGGGAGGACCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| 3UTR-3UTR CCA 90 bp | AAGACTGACAGCAATAGTTCTGGCAGTGTGGCTGGGCACTTGAATTTTGGCTCCGCAGTGGTGCAATCATaGCTCACTACCTCAACCTCC | + |
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Preference number: 2 (lower is better) Translates to: KTDSNSSGSVAGHLNFGSAVVQS*LTTSTS Trigger: GGAGGTTGAGGTAGTGAGCCATGATTGCACCACTGC...GGAGCCAAAATTCAAGTGCCCAGCCACACTGCCAGAACTATTGCTGTCAGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| 3UTR-3UTR TCA 90 bp | CAGGTGGTCCTCCCACCTATAGGCAGGTGCCATCACAGCATGCAAATTTTTGTTAGCACTGGCTCAATCTaGACCCGTTTCCTCACTTAC | + |
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Preference number: 2 (lower is better) Translates to: QVVLPPIGRCHHSMQIFVSTGSI*TRFLTY Trigger: GTAAGTGAGGAAACGGGTTCAGATTGAGCCAGTGCT...AACAAAAATTTGCATGCTGTGATGGCACCTGCCTATAGGTGGGAGGACCACCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| 3UTR-3UTR TCA 90 bp | CAGGTGGTCCTCCCACCTATAGGCAGGTGCCATCACAGCATGCAAATTTTTGTTCATGAGCCACCAGGTTaGCCCCAAACCTGCATTTTA | + |
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Preference number: 2 (lower is better) Translates to: QVVLPPIGRCHHSMQIFVHEPPG*PQTCIL Trigger: TAAAATGCAGGTTTGGGGTCAACCTGGTGGCTCATG...AACAAAAATTTGCATGCTGTGATGGCACCTGCCTATAGGTGGGAGGACCACCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| 3UTR-3UTR GCA 90 bp | AAGACTGACAGCAATAGTTCTGGCAGTGTGGCTGGGCACTTGAATTTTGGCTCCAGCTATGTATTATCATaGCACTGCACTCCAGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: KTDSNSSGSVAGHLNFGSSYVLS*HCTPAW Trigger: CCAGGCTGGAGTGCAGTGGCATGATAATACATAGCT...GGAGCCAAAATTCAAGTGCCCAGCCACACTGCCAGAACTATTGCTGTCAGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| 3UTR-3UTR CCA 90 bp | AAGACTGACAGCAATAGTTCTGGCAGTGTGGCTGGGCACTTGAATTTTGGCTCCGATAAACCAAGAAGCTaGGCAGTGGCTCATGCCTAT | + |
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Preference number: 2 (lower is better) Translates to: KTDSNSSGSVAGHLNFGSDKPRS*AVAHAY Trigger: ATAGGCATGAGCCACTGCCCAGCTTCTTGGTTTATC...GGAGCCAAAATTCAAGTGCCCAGCCACACTGCCAGAACTATTGCTGTCAGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| 3UTR-3UTR CCA 90 bp | AAGACTGACAGCAATAGTTCTGGCAGTGTGGCTGGGCACTTGAATTTTGGCTCCCATTGCACTGCAGCCTaGGAAAGAGACCATCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: KTDSNSSGSVAGHLNFGSHCTAA*ERDHLK Trigger: TTTGAGATGGTCTCTTTCCCAGGCTGCAGTGCAATG...GGAGCCAAAATTCAAGTGCCCAGCCACACTGCCAGAACTATTGCTGTCAGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| 3UTR CAA 90 bp | GTGTCTGAAGCCTCACCTCAAGCCTATAGAATTAGAACCTGCATTTaGTTTTTAAATTTGAGAGTCAGGGGTCTCCGTCACCCAGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: VSEASPQAYRIRTCI*FLNLRVRGLRHPGW Trigger: CCAGCCTGGGTGACGGAGACCCCTGACTCTCAAATTTAAAAACAAAATGCAGGTTCTAATTCTATAGGCTTGAGGTGAGGCTTCAGACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| 3UTR CAA 90 bp | TGGGCACTTGAATTTTGGCTCCAGCAGTTACTGTTATCTAACCCTTaGCTACTGTACATGTGGTCACATCAGACCAACAGCATCATTTGG | + |
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Preference number: 2 (lower is better) Translates to: WALEFWLQQLLLSNP*LLYMWSHQTNSIIW Trigger: CCAAATGATGCTGTTGGTCTGATGTGACCACATGTACAGTAGCAAAGGGTTAGATAACAGTAACTGCTGGAGCCAAAATTCAAGTGCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| 3UTR CAA 90 bp | TTATTAAAGACTGACAGCAATAGTTCTGGCAGTGTGGCTGGGCACTaGAATTTTGGCTCCAGCAGTTACTGTTATCTAACCCTTTGCTAC | + |
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Preference number: 2 (lower is better) Translates to: LLKTDSNSSGSVAGH*NFGSSSYCYLTLCY Trigger: GTAGCAAAGGGTTAGATAACAGTAACTGCTGGAGCCAAAATTCAAGTGCCCAGCCACACTGCCAGAACTATTGCTGTCAGTCTTTAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| 3UTR-3UTR GCA 90 bp | CACTTACTTCTACCCCATAGTTGTCCCATAAATCCAAGATCATCTGGTTCAGAAGTTTGGTCTCAGAACTaGAAAAGAAACTCTCATCCC | + |
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Preference number: 2 (lower is better) Translates to: HLLLPHSCPINPRSSGSEVWSQN*KRNSHP Trigger: GGGATGAGAGTTTCTTTTGCAGTTCTGAGACCAAAC...TTCTGAACCAGATGATCTTGGATTTATGGGACAACTATGGGGTAGAAGTAAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549183.1 |
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| 3UTR TCA 72 bp | GGATGGCTTAGCCCAGGTCAAGGTGGGGGTGAGCTATaGTGGTGCCATTGCACTGCAGCCTGGGAAAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: GWLSPGQGGGEL*WCHCTAAWERD Trigger: GTCTCTTTCCCAGGCTGCAGTGCAATGGCACCATCATAGCTCACCCCCACCTTGACCTGGGCTAAGCCATCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| 3UTR-3UTR CAA 90 bp | ATGCAGTGGTGCAATCATGGCTCACTACCTCAACCTCCTTGGGCTCAGGTGGTCAGGCAGGAGGATCACTaGAAGCCAGTTGAAGACCAC | + |
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Preference number: 3 (lower is better) Translates to: MQWCNHGSLPQPPWAQVVRQEDH*KPVEDH Trigger: GTGGTCTTCAACTGGCTTCAAGTGATCCTCCTGCCT...GACCACCTGAGCCCAAGGAGGTTGAGGTAGTGAGCCATGATTGCACCACTGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| 3UTR GCA 72 bp | CCTTGGGCTCAGGTGGTCCTCCCACCTATAGGCAGGTaGCATCACAGCATGCAAATTTTTGTTTTGGTAGAG | + |
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Preference number: 3 (lower is better) Translates to: PWAQVVLPPIGR*HHSMQIFVLVE Trigger: CTCTACCAAAACAAAAATTTGCATGCTGTGATGGCACCTGCCTATAGGTGGGAGGACCACCTGAGCCCAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| 3UTR TCA 72 bp | CCAACTTGGCCTCCCGAAGTGCATGAGCCACCAGGTTaGCCCCAAACCTGCATTTTAATATCTACAGGTGAT | + |
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Preference number: 3 (lower is better) Translates to: PTWPPEVHEPPG*PQTCILISTGD Trigger: ATCACCTGTAGATATTAAAATGCAGGTTTGGGGTCAACCTGGTGGCTCATGCACTTCGGGAGGCCAAGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| 3UTR GCA 72 bp | AATTTTGGCTCCAGCAGTTACTGTTATCTAACCCTTTaGTACTGTACATGTGGTCACATCAGACCAACAGCA | + |
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Preference number: 3 (lower is better) Translates to: NFGSSSYCYLTL*YCTCGHIRPTA Trigger: TGCTGTTGGTCTGATGTGACCACATGTACAGTAGCAAAGGGTTAGATAACAGTAACTGCTGGAGCCAAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| 3UTR CCA 72 bp | CAGTTACTGTTATCTAACCCTTTGCTACTGTACATGTaGTCACATCAGACCAACAGCATCATTTGGGAGGTT | + |
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Preference number: 3 (lower is better) Translates to: QLLLSNPLLLYM*SHQTNSIIWEV Trigger: AACCTCCCAAATGATGCTGTTGGTCTGATGTGACCACATGTACAGTAGCAAAGGGTTAGATAACAGTAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| CDS-3UTR TCA 90 bp | ATGCAGTGGTGCAATCATGGCTCACTACCTCAACCTCCTTGGGCTCAGGTGGTCAGGGGTCTGCGGCGGTaGAGGAGGCGAAGGGACGGC | + |
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Preference number: 4 (lower is better) Translates to: MQWCNHGSLPQPPWAQVVRGLRR*RRRRDG Trigger: GCCGTCCCTTCGCCTCCTTCACCGCCGCAGACCCCT...GACCACCTGAGCCCAAGGAGGTTGAGGTAGTGAGCCATGATTGCACCACTGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| CDS-3UTR GCA 90 bp | ATGCAGTGGTGCAATCATGGCTCACTACCTCAACCTCCTTGGGCTCAGGTGGTCCTTGGCCTCCCGAAGTaGATGAGCCACCAGGTTGAC | + |
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Preference number: 4 (lower is better) Translates to: MQWCNHGSLPQPPWAQVVLGLPK*MSHQVD Trigger: GTCAACCTGGTGGCTCATGCACTTCGGGAGGCCAAG...GACCACCTGAGCCCAAGGAGGTTGAGGTAGTGAGCCATGATTGCACCACTGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| CDS-3UTR TCA 90 bp | ATGCAGTGGTGCAATCATGGCTCACTACCTCAACCTCCTTGGGCTCAGGTGGTCAGCAGGAGAATCACATaGGTCCAGGAGCTCGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: MQWCNHGSLPQPPWAQVVSRRIT*VQELEA Trigger: AGCCTCGAGCTCCTGGACTCATGTGATTCTCCTGCT...GACCACCTGAGCCCAAGGAGGTTGAGGTAGTGAGCCATGATTGCACCACTGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| CDS-3UTR GCA 90 bp | ACTGACAGCAATAGTTCTGGCAGTGTGGCTGGGCACTTGAATTTTGGCTCCAGCGAACTTGAAGGGGTCTaGGGCGGTGAAGGAGGCGAA | + |
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Preference number: 4 (lower is better) Translates to: TDSNSSGSVAGHLNFGSSELEGV*GGEGGE Trigger: TTCGCCTCCTTCACCGCCGCAGACCCCTTCAAGTTC...GCTGGAGCCAAAATTCAAGTGCCCAGCCACACTGCCAGAACTATTGCTGTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| CDS-3UTR CCA 90 bp | GTCCAGGAGCTCGAGGCTGCAATGAGCTATGTATTATCATGCCACTGCACTCCAGCTGAGGTGGGAGGATaGCTTAGCCCAGGTCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: VQELEAAMSYVLSCHCTPAEVGG*LSPGQG Trigger: ACCTTGACCTGGGCTAAGCCATCCTCCCACCTCAGC...TGGAGTGCAGTGGCATGATAATACATAGCTCATTGCAGCCTCGAGCTCCTGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| CDS-3UTR TCA 90 bp | ACTGACAGCAATAGTTCTGGCAGTGTGGCTGGGCACTTGAATTTTGGCTCCAGCTCACTTGAAGCCAGTTaGAGACCACCCTGGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: TDSNSSGSVAGHLNFGSSSLEAS*RPPWAA Trigger: TGCTGCCCAGGGTGGTCTTCAACTGGCTTCAAGTGA...GCTGGAGCCAAAATTCAAGTGCCCAGCCACACTGCCAGAACTATTGCTGTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| CDS-3UTR TCA 90 bp | ATGCAGTGGTGCAATCATGGCTCACTACCTCAACCTCCTTGGGCTCAGGTGGTCCATGAGCCACCAGGTTaGCCCCAAACCTGCATTTTA | + |
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Preference number: 4 (lower is better) Translates to: MQWCNHGSLPQPPWAQVVHEPPG*PQTCIL Trigger: TAAAATGCAGGTTTGGGGTCAACCTGGTGGCTCATG...GACCACCTGAGCCCAAGGAGGTTGAGGTAGTGAGCCATGATTGCACCACTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| CDS-3UTR GCA 90 bp | ATGCAGTGGTGCAATCATGGCTCACTACCTCAACCTCCTTGGGCTCAGGTGGTCCCACCTATAGGCAGGTaGCATCACAGCATGCAAATT | + |
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Preference number: 4 (lower is better) Translates to: MQWCNHGSLPQPPWAQVVPPIGR*HHSMQI Trigger: AATTTGCATGCTGTGATGGCACCTGCCTATAGGTGG...GACCACCTGAGCCCAAGGAGGTTGAGGTAGTGAGCCATGATTGCACCACTGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| CDS-3UTR CCA 90 bp | GTCCAGGAGCTCGAGGCTGCAATGAGCTATGTATTATCATGCCACTGCACTCCAGCAGTGGTGCAATCATaGCTCACTACCTCAACCTCC | + |
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Preference number: 4 (lower is better) Translates to: VQELEAAMSYVLSCHCTPAVVQS*LTTSTS Trigger: GGAGGTTGAGGTAGTGAGCCATGATTGCACCACTGC...TGGAGTGCAGTGGCATGATAATACATAGCTCATTGCAGCCTCGAGCTCCTGGAC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| CDS-3UTR TCA 90 bp | GTCCAGGAGCTCGAGGCTGCAATGAGCTATGTATTATCATGCCACTGCACTCCAAGCACTGGCTCAATCTaGACCCGTTTCCTCACTTAC | + |
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Preference number: 4 (lower is better) Translates to: VQELEAAMSYVLSCHCTPSTGSI*TRFLTY Trigger: GTAAGTGAGGAAACGGGTTCAGATTGAGCCAGTGCT...TGGAGTGCAGTGGCATGATAATACATAGCTCATTGCAGCCTCGAGCTCCTGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| CDS-3UTR TCA 90 bp | CAGGTGGTCCTCCCACCTATAGGCAGGTGCCATCACAGCATGCAAATTTTTGTTGTGTGGCTGGGCACTTaGATTTTGGCTCCAGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: QVVLPPIGRCHHSMQIFVVWLGT*ILAPAV Trigger: AACTGCTGGAGCCAAAATTCAAGTGCCCAGCCACAC...AACAAAAATTTGCATGCTGTGATGGCACCTGCCTATAGGTGGGAGGACCACCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| CDS-3UTR GCA 90 bp | CAGGTGGTCCTCCCACCTATAGGCAGGTGCCATCACAGCATGCAAATTTTTGTTATGGTGCCATTGCACTaGAGCCTGGGAAAGAGACCA | + |
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Preference number: 4 (lower is better) Translates to: QVVLPPIGRCHHSMQIFVMVPLH*SLGKRP Trigger: TGGTCTCTTTCCCAGGCTGCAGTGCAATGGCACCAT...AACAAAAATTTGCATGCTGTGATGGCACCTGCCTATAGGTGGGAGGACCACCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| CDS-3UTR CCA 90 bp | CAGGTGGTCCTCCCACCTATAGGCAGGTGCCATCACAGCATGCAAATTTTTGTTGACCCTCGACTCAGGTaGTTTCATCTACCAGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: QVVLPPIGRCHHSMQIFVDPRLR*FHLPAS Trigger: TGAGGCTGGTAGATGAAACCACCTGAGTCGAGGGTC...AACAAAAATTTGCATGCTGTGATGGCACCTGCCTATAGGTGGGAGGACCACCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| CDS-3UTR TCA 90 bp | AGTCTCATTTTAGTTGCAAAGAATGATTTCTGTAGTTTGGTCTCAGAACTGCAAAGGGGTCTGCGGCGGTaGAGGAGGCGAAGGGACGGC | + |
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Preference number: 4 (lower is better) Translates to: SLILVAKNDFCSLVSELQRGLRR*RRRRDG Trigger: GCCGTCCCTTCGCCTCCTTCACCGCCGCAGACCCCT...TTGCAGTTCTGAGACCAAACTACAGAAATCATTCTTTGCAACTAAAATGAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549183.1 |
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| CDS-3UTR TCA 90 bp | CAGGTGGTCCTCCCACCTATAGGCAGGTGCCATCACAGCATGCAAATTTTTGTTAGATGCACTCACGCATaGCTAGAACTTGAAGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: QVVLPPIGRCHHSMQIFVRCTHA*LELEGV Trigger: GACCCCTTCAAGTTCTAGTCATGCGTGAGTGCATCT...AACAAAAATTTGCATGCTGTGATGGCACCTGCCTATAGGTGGGAGGACCACCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| CDS-3UTR TCA 90 bp | GTCCAGGAGCTCGAGGCTGCAATGAGCTATGTATTATCATGCCACTGCACTCCAAGCTCGAGGCTGCAATaGGCTATGTATTATCATGCC | + |
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Preference number: 4 (lower is better) Translates to: VQELEAAMSYVLSCHCTPSSRLQ*AMYYHA Trigger: GGCATGATAATACATAGCTCATTGCAGCCTCGAGCT...TGGAGTGCAGTGGCATGATAATACATAGCTCATTGCAGCCTCGAGCTCCTGGAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| CDS-3UTR CCA 90 bp | GCTGGGCACTTGAATTTTGGCTCCAGCAGTTACTGTTATCTAACCCTTTGCTACGTGATCCACCCAACTTaGCCTCCCGAAGTGCATGAG | + |
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Preference number: 4 (lower is better) Translates to: AGHLNFGSSSYCYLTLCYVIHPT*PPEVHE Trigger: CTCATGCACTTCGGGAGGCCAAGTTGGGTGGATCAC...GTAGCAAAGGGTTAGATAACAGTAACTGCTGGAGCCAAAATTCAAGTGCCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| CDS-3UTR CCA 90 bp | GTCCAGGAGCTCGAGGCTGCAATGAGCTATGTATTATCATGCCACTGCACTCCACATTGCACTGCAGCCTaGGAAAGAGACCATCTCAAA | + |
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Preference number: 4 (lower is better) Translates to: VQELEAAMSYVLSCHCTPHCTAA*ERDHLK Trigger: TTTGAGATGGTCTCTTTCCCAGGCTGCAGTGCAATG...TGGAGTGCAGTGGCATGATAATACATAGCTCATTGCAGCCTCGAGCTCCTGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| CDS-3UTR CCA 90 bp | AAGACTGACAGCAATAGTTCTGGCAGTGTGGCTGGGCACTTGAATTTTGGCTCCTTCTGGCAGTGTGGCTaGGCACTTGAATTTTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: KTDSNSSGSVAGHLNFGSFWQCG*ALEFWL Trigger: GAGCCAAAATTCAAGTGCCCAGCCACACTGCCAGAA...GGAGCCAAAATTCAAGTGCCCAGCCACACTGCCAGAACTATTGCTGTCAGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| CDS-3UTR GCA 90 bp | GTGGTCCTCCCACCTATAGGCAGGTGCCATCACAGCATGCAAATTTTTGTTTTGAGCTATGTATTATCATaGCACTGCACTCCAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: VVLPPIGRCHHSMQIFVLSYVLS*HCTPAW Trigger: CCAGGCTGGAGTGCAGTGGCATGATAATACATAGCT...CAAAACAAAAATTTGCATGCTGTGATGGCACCTGCCTATAGGTGGGAGGACCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| CDS-3UTR GCA 90 bp | GTCCAGGAGCTCGAGGCTGCAATGAGCTATGTATTATCATGCCACTGCACTCCATGTTATCTAACCCTTTaGTACTGTACATGTGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: VQELEAAMSYVLSCHCTPCYLTL*YCTCGH Trigger: GTGACCACATGTACAGTAGCAAAGGGTTAGATAACA...TGGAGTGCAGTGGCATGATAATACATAGCTCATTGCAGCCTCGAGCTCCTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| CDS-3UTR CCA 90 bp | GCTGGGCACTTGAATTTTGGCTCCAGCAGTTACTGTTATCTAACCCTTTGCTACGATAAACCAAGAAGCTaGGCAGTGGCTCATGCCTAT | + |
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Preference number: 4 (lower is better) Translates to: AGHLNFGSSSYCYLTLCYDKPRS*AVAHAY Trigger: ATAGGCATGAGCCACTGCCCAGCTTCTTGGTTTATC...GTAGCAAAGGGTTAGATAACAGTAACTGCTGGAGCCAAAATTCAAGTGCCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| 3UTR CAA 72 bp | ACTGACAGCAATAGTTCTGGCAGTGTGGCTGGGCACTaGAATTTTGGCTCCAGCAGTTACTGTTATCTAACC | + |
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Preference number: 4 (lower is better) Translates to: TDSNSSGSVAGH*NFGSSSYCYLT Trigger: GGTTAGATAACAGTAACTGCTGGAGCCAAAATTCAAGTGCCCAGCCACACTGCCAGAACTATTGCTGTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| CDS-3UTR CCA 90 bp | GCTGGGCACTTGAATTTTGGCTCCAGCAGTTACTGTTATCTAACCCTTTGCTACTTGCTACTGTACATGTaGTCACATCAGACCAACAGC | + |
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Preference number: 4 (lower is better) Translates to: AGHLNFGSSSYCYLTLCYLLLYM*SHQTNS Trigger: GCTGTTGGTCTGATGTGACCACATGTACAGTAGCAA...GTAGCAAAGGGTTAGATAACAGTAACTGCTGGAGCCAAAATTCAAGTGCCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| CDS-3UTR CCA 90 bp | GTGGTCCTCCCACCTATAGGCAGGTGCCATCACAGCATGCAAATTTTTGTTTTGTGGGCACTTGAATTTTaGCTCCAGCAGTTACTGTTA | + |
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Preference number: 4 (lower is better) Translates to: VVLPPIGRCHHSMQIFVLWALEF*LQQLLL Trigger: TAACAGTAACTGCTGGAGCCAAAATTCAAGTGCCCA...CAAAACAAAAATTTGCATGCTGTGATGGCACCTGCCTATAGGTGGGAGGACCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| CDS-3UTR GCA 90 bp | AGTCTCATTTTAGTTGCAAAGAATGATTTCTGTAGTTTGGTCTCAGAACTGCAAGAACTTGAAGGGGTCTaGGGCGGTGAAGGAGGCGAA | + |
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Preference number: 4 (lower is better) Translates to: SLILVAKNDFCSLVSELQELEGV*GGEGGE Trigger: TTCGCCTCCTTCACCGCCGCAGACCCCTTCAAGTTC...TTGCAGTTCTGAGACCAAACTACAGAAATCATTCTTTGCAACTAAAATGAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549183.1 |
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| 3UTR CAA 72 bp | GAATTTTGGCTCCAGCAGTTACTGTTATCTAACCCTTaGCTACTGTACATGTGGTCACATCAGACCAACAGC | + |
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Preference number: 4 (lower is better) Translates to: EFWLQQLLLSNP*LLYMWSHQTNS Trigger: GCTGTTGGTCTGATGTGACCACATGTACAGTAGCAAAGGGTTAGATAACAGTAACTGCTGGAGCCAAAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| CDS-3UTR TCA 90 bp | GCAAAGAATGATTTCTGTAGTTTGGTCTCAGAACTGCAAAAGAAACTCTCATCCAGATGCACTCACGCATaGCTAGAACTTGAAGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: AKNDFCSLVSELQKKLSSRCTHA*LELEGV Trigger: GACCCCTTCAAGTTCTAGTCATGCGTGAGTGCATCT...GGATGAGAGTTTCTTTTGCAGTTCTGAGACCAAACTACAGAAATCATTCTTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549183.1 |
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| 3UTR CAA 72 bp | GCCTCACCTCAAGCCTATAGAATTAGAACCTGCATTTaGTTTTTAAATTTGAGAGTCAGGGGTCTCCGTCAC | + |
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Preference number: 4 (lower is better) Translates to: ASPQAYRIRTCI*FLNLRVRGLRH Trigger: GTGACGGAGACCCCTGACTCTCAAATTTAAAAACAAAATGCAGGTTCTAATTCTATAGGCTTGAGGTGAGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| CDS-3UTR GCA 90 bp | GCAAAGAATGATTTCTGTAGTTTGGTCTCAGAACTGCAAAAGAAACTCTCATCCGTTTGGTCTCAGAACTaGAAAAGAAACTCTCATCCC | + |
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Preference number: 4 (lower is better) Translates to: AKNDFCSLVSELQKKLSSVWSQN*KRNSHP Trigger: GGGATGAGAGTTTCTTTTGCAGTTCTGAGACCAAAC...GGATGAGAGTTTCTTTTGCAGTTCTGAGACCAAACTACAGAAATCATTCTTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549183.1 |
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| CDS-3UTR CCA 90 bp | TTAGTTGCAAAGAATGATTTCTGTAGTTTGGTCTCAGAACTGCAAAAGAAACTCATGATTTCTGTAGTTTaGTCTCAGAACTGCAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: LVAKNDFCSLVSELQKKLMISVV*SQNCKR Trigger: TCTTTTGCAGTTCTGAGACCAAACTACAGAAATCAT...GAGTTTCTTTTGCAGTTCTGAGACCAAACTACAGAAATCATTCTTTGCAACTAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549183.1 |
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| CDS GCA 90 bp | AGCCCCGCCGCCGCCGCAGTGCGGGTGCAGGAACCGGGCCAGTACTaGGCCCAGGGCGCAGCAGAGCGCTGGGGAGGAACAAAGGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: SPAAAAVRVQEPGQY*AQGAAERWGGTKAA Trigger: CGCCGCCTTTGTTCCTCCCCAGCGCTCTGCTGCGCCCTGGGCGCAGTACTGGCCCGGTTCCTGCACCCGCACTGCGGCGGCGGCGGGGCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549554.1 |
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| CDS GCA 90 bp | AGCTTAGCCCCAAATCCTCAAGCCCCGCCGCCGCCGCAGTGCGGGTaGAGGAACCGGGCCAGTACTGCGCCCAGGGCGCAGCAGAGCGCT | + |
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Preference number: 5 (lower is better) Translates to: SLAPNPQAPPPPQCG*RNRASTAPRAQQSA Trigger: AGCGCTCTGCTGCGCCCTGGGCGCAGTACTGGCCCGGTTCCTGCACCCGCACTGCGGCGGCGGCGGGGCTTGAGGATTTGGGGCTAAGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549554.1 |
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| CDS TCA 90 bp | TTCGTCTCCGCCATCAGCTCGGCAGTCGCGAAGCAGCAACCATGGTaGGAATCGGCTTCGGCTCTTTGTGGCCGTTGGGTGGAGTCAGCG | + |
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Preference number: 5 (lower is better) Translates to: FVSAISSAVAKQQPW*ESASALCGRWVESA Trigger: CGCTGACTCCACCCAACGGCCACAAAGAGCCGAAGCCGATTCTCACCATGGTTGCTGCTTCGCGACTGCCGAGCTGATGGCGGAGACGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549554.1 |
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| CDS CCA 90 bp | AGTCGCGAAGCAGCAACCATGGTGAGAATCGGCTTCGGCTCTTTGTaGCCGTTGGGTGGAGTCAGCGCCCCCAGGCTCTACTTGGAAAAC | + |
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Preference number: 5 (lower is better) Translates to: SREAATMVRIGFGSL*PLGGVSAPRLYLEN Trigger: GTTTTCCAAGTAGAGCCTGGGGGCGCTGACTCCACCCAACGGCCACAAAGAGCCGAAGCCGATTCTCACCATGGTTGCTGCTTCGCGACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000549554.1 |
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| CDS CCA 90 bp | CCAGCTCATCCCACGTCGCTTGCACCAATCACCAGTCTCCTGTCATaGCTTCTCTGGGCAGATTGGGGGTCTGGACCAACAGGAAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: PAHPTSLAPITSLLS*LLWADWGSGPTGKG Trigger: GCCTTTTCCTGTTGGTCCAGACCCCCAATCTGCCCAGAGAAGCCATGACAGGAGACTGGTGATTGGTGCAAGCGACGTGGGATGAGCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000549554.1 |
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| CDS GCA 90 bp | GAGGAGGCACACAGTTTCCGGTTCTCCAGCTCATCCCACGTCGCTTaGACCAATCACCAGTCTCCTGTCATGGCTTCTCTGGGCAGATTG | + |
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Preference number: 5 (lower is better) Translates to: EEAHSFRFSSSSHVA*TNHQSPVMASLGRL Trigger: CAATCTGCCCAGAGAAGCCATGACAGGAGACTGGTGATTGGTGCAAGCGACGTGGGATGAGCTGGAGAACCGGAAACTGTGTGCCTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549554.1 |
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| CDS CCA 90 bp | AGCAACCATGGTGAGAATCGGCTTCGGCTCTTTGTGGCCGTTGGGTaGAGTCAGCGCCCCCAGGCTCTACTTGGAAAACCTTTAAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: SNHGENRLRLFVAVG*SQRPQALLGKPLSS Trigger: AGAGCTTAAAGGTTTTCCAAGTAGAGCCTGGGGGCGCTGACTCCACCCAACGGCCACAAAGAGCCGAAGCCGATTCTCACCATGGTTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000549554.1 |
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| CDS-3UTR CAA 90 bp | ATGCAGTGGTGCAATCATGGCTCACTACCTCAACCTCCTTGGGCTCAGGTGGTCAGTGTGGCTGGGCACTaGAATTTTGGCTCCAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: MQWCNHGSLPQPPWAQVVSVAGH*NFGSSS Trigger: ACTGCTGGAGCCAAAATTCAAGTGCCCAGCCACACT...GACCACCTGAGCCCAAGGAGGTTGAGGTAGTGAGCCATGATTGCACCACTGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| CDS-3UTR CAA 90 bp | CAGGTGGTCCTCCCACCTATAGGCAGGTGCCATCACAGCATGCAAATTTTTGTTAGGCAGGAGGATCACTaGAAGCCAGTTGAAGACCAC | + |
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Preference number: 5 (lower is better) Translates to: QVVLPPIGRCHHSMQIFVRQEDH*KPVEDH Trigger: GTGGTCTTCAACTGGCTTCAAGTGATCCTCCTGCCT...AACAAAAATTTGCATGCTGTGATGGCACCTGCCTATAGGTGGGAGGACCACCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000301072.11 |
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| CDS TCA 90 bp | CTCCAGCTGTTAGAGATGCCGAGACTCATTAGCAGATTCAAGGTGTaGCGGACTGGTGCCTTCATTGTAAAATGCCTCAACTTGCTTGTA | + |
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Preference number: 5 (lower is better) Translates to: LQLLEMPRLISRFKV*RTGAFIVKCLNLLV Trigger: TACAAGCAAGTTGAGGCATTTTACAATGAAGGCACCAGTCCGTCACACCTTGAATCTGCTAATGAGTCTCGGCATCTCTAACAGCTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550574.1 |
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| CDS GCA 90 bp | ACAGCCTGTAACTACAAAATCGACTTCTTATCCAGTTCCCTCAGCTaGTCCATTTATATGTACGGAACCCAAGGGACAGAGCTGGGTTCA | + |
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Preference number: 5 (lower is better) Translates to: TACNYKIDFLSSSLS*SIYMYGTQGTELGS Trigger: TGAACCCAGCTCTGTCCCTTGGGTTCCGTACATATAAATGGAGCAGCTGAGGGAACTGGATAAGAAGTCGATTTTGTAGTTACAGGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000549818.5 ENST00000552448.1 |
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| CDS-3UTR CAA 90 bp | CAAAGAATGATTTCTGTAGTTTGGTCTCAGAACTGCAAAAGAAACTCTCATCCCAATGATTTCTGTAGTTaGGTCTCAGAACTGCAAAAG | + |
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Preference number: 5 (lower is better) Translates to: QRMISVVWSQNCKRNSHPNDFCS*VSELQK Trigger: CTTTTGCAGTTCTGAGACCAAACTACAGAAATCATT...GGGATGAGAGTTTCTTTTGCAGTTCTGAGACCAAACTACAGAAATCATTCTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549183.1 |
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| CDS GCA 72 bp | CCAAATCCTCAAGCCCCGCCGCCGCCGCAGTGCGGGTaGAGGAACCGGGCCAGTACTGCGCCCAGGGCGCAG | + |
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Preference number: 6 (lower is better) Translates to: PNPQAPPPPQCG*RNRASTAPRAQ Trigger: CTGCGCCCTGGGCGCAGTACTGGCCCGGTTCCTGCACCCGCACTGCGGCGGCGGCGGGGCTTGAGGATTTGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549554.1 |
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| CDS CCA 72 bp | GCAGCAACCATGGTGAGAATCGGCTTCGGCTCTTTGTaGCCGTTGGGTGGAGTCAGCGCCCCCAGGCTCTAC | + |
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Preference number: 6 (lower is better) Translates to: AATMVRIGFGSL*PLGGVSAPRLY Trigger: GTAGAGCCTGGGGGCGCTGACTCCACCCAACGGCCACAAAGAGCCGAAGCCGATTCTCACCATGGTTGCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000549554.1 |
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| CDS CAA 72 bp | GAAGCAGCAACCATGGTGAGAATCGGCTTCGGCTCTTaGTGGCCGTTGGGTGGAGTCAGCGCCCCCAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: EAATMVRIGFGS*WPLGGVSAPRL Trigger: GAGCCTGGGGGCGCTGACTCCACCCAACGGCCACAAAGAGCCGAAGCCGATTCTCACCATGGTTGCTGCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000549554.1 |
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| CDS CAA 90 bp | GGCAGTCGCGAAGCAGCAACCATGGTGAGAATCGGCTTCGGCTCTTaGTGGCCGTTGGGTGGAGTCAGCGCCCCCAGGCTCTACTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: GSREAATMVRIGFGS*WPLGGVSAPRLYLE Trigger: TTCCAAGTAGAGCCTGGGGGCGCTGACTCCACCCAACGGCCACAAAGAGCCGAAGCCGATTCTCACCATGGTTGCTGCTTCGCGACTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000549554.1 |
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| CDS TCA 72 bp | GCCATCAGCTCGGCAGTCGCGAAGCAGCAACCATGGTaGGAATCGGCTTCGGCTCTTTGTGGCCGTTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: AISSAVAKQQPW*ESASALCGRWV Trigger: CACCCAACGGCCACAAAGAGCCGAAGCCGATTCTCACCATGGTTGCTGCTTCGCGACTGCCGAGCTGATGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549554.1 |
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| CDS CCA 72 bp | GGTGAGAATCGGCTTCGGCTCTTTGTGGCCGTTGGGTaGAGTCAGCGCCCCCAGGCTCTACTTGGAAAACCT | + |
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Preference number: 6 (lower is better) Translates to: GENRLRLFVAVG*SQRPQALLGKP Trigger: AGGTTTTCCAAGTAGAGCCTGGGGGCGCTGACTCCACCCAACGGCCACAAAGAGCCGAAGCCGATTCTCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000549554.1 |
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| CDS CAA 72 bp | ACCATGGTGAGAATCGGCTTCGGCTCTTTGTGGCCGTaGGGTGGAGTCAGCGCCCCCAGGCTCTACTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: TMVRIGFGSLWP*GGVSAPRLYLE Trigger: TTCCAAGTAGAGCCTGGGGGCGCTGACTCCACCCAACGGCCACAAAGAGCCGAAGCCGATTCTCACCATGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000549554.1 |
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| CDS CCA 72 bp | CCCACGTCGCTTGCACCAATCACCAGTCTCCTGTCATaGCTTCTCTGGGCAGATTGGGGGTCTGGACCAACA | + |
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Preference number: 6 (lower is better) Translates to: PTSLAPITSLLS*LLWADWGSGPT Trigger: TGTTGGTCCAGACCCCCAATCTGCCCAGAGAAGCCATGACAGGAGACTGGTGATTGGTGCAAGCGACGTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000549554.1 |
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| CDS CAA 90 bp | CGAGGAGGCACACAGTTTCCGGTTCTCCAGCTCATCCCACGTCGCTaGCACCAATCACCAGTCTCCTGTCATGGCTTCTCTGGGCAGATT | + |
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Preference number: 6 (lower is better) Translates to: RGGTQFPVLQLIPRR*HQSPVSCHGFSGQI Trigger: AATCTGCCCAGAGAAGCCATGACAGGAGACTGGTGATTGGTGCAAGCGACGTGGGATGAGCTGGAGAACCGGAAACTGTGTGCCTCCTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549554.1 |
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| CDS GCA 72 bp | ATCAGATCCGGATTCAAGGGTCTATCTCACAGGCCGTaGCGTGCGCTTCACACTGCATCACACGAGGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: IRSGFKGLSHRP*RALHTASHEEA Trigger: TGCCTCCTCGTGTGATGCAGTGTGAAGCGCACGGCACGGCCTGTGAGATAGACCCTTGAATCCGGATCTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550574.1 |
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| CDS CAA 90 bp | TCCAAGCACACAAAGCACTCATCCCTCCCTAGCTCCTCCACCCCATaGAACCAGGCTGTCATTTTAGAGCTGGGCGCCCATTGTTCACTT | + |
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Preference number: 6 (lower is better) Translates to: SKHTKHSSLPSSSTP*NQAVILELGAHCSL Trigger: AAGTGAACAATGGGCGCCCAGCTCTAAAATGACAGCCTGGTTCAATGGGGTGGAGGAGCTAGGGAGGGATGAGTGCTTTGTGTGCTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541364.5 |
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| CDS CAA 72 bp | TCACGCTTTGAATCACAGCCAGGTTCTCCTCTGCTTTaGCTGGATGTGCATGTGTTAAAAGGCGCAGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SRFESQPGSPLL*LDVHVLKGAGS Trigger: GCTCCCTGCGCCTTTTAACACATGCACATCCAGCAAAAGCAGAGGAGAACCTGGCTGTGATTCAAAGCGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541364.5 |
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| CDS CAA 72 bp | ACACACTTTGAATCACAGCCAGGTTCTCCTCTGCTTTaGCTGGATGTGCATGTGTTAAAAGGCGCAGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: THFESQPGSPLL*LDVHVLKGAGS Trigger: GCTCCCTGCGCCTTTTAACACATGCACATCCAGCAAAAGCAGAGGAGAACCTGGCTGTGATTCAAAGTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000549818.5 ENST00000550574.1 ENST00000552448.1 |
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| CDS CAA 72 bp | AGACTCTTTGAATCACAGCCAGGTTCTCCTCTGCTTTaGCTGGATGTGCATGTGTTAAAAGGCGCAGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: RLFESQPGSPLL*LDVHVLKGAGS Trigger: GCTCCCTGCGCCTTTTAACACATGCACATCCAGCAAAAGCAGAGGAGAACCTGGCTGTGATTCAAAGAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552125.1 |
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| CDS TCA 72 bp | TTAGAGATGCCGAGACTCATTAGCAGATTCAAGGTGTaGCGGACTGGTGCCTTCATTGTAAAATGCCTCAAC | + |
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Preference number: 6 (lower is better) Translates to: LEMPRLISRFKV*RTGAFIVKCLN Trigger: GTTGAGGCATTTTACAATGAAGGCACCAGTCCGTCACACCTTGAATCTGCTAATGAGTCTCGGCATCTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550574.1 |
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