Pregenerated sensors for TUBA1A (Homo sapiens)
Ensembl gene IDs: ENSG00000167552Ensembl transcript IDs: ENST00000295766.9, ENST00000547939.6, ENST00000550767.6, ENST00000550811.2, ENST00000552924.2
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CGCCTAGGCGCCGCCTTTGTTCCTCCCCAGCGCTCTGCTGCGCCCTaGGCGCAGTACTGGCCCGGTTCCTGCACCCGCACTGCGGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: RLGAAFVPPQRSAAP*AQYWPGSCTRTAAA Trigger: CGCCGCCGCAGTGCGGGTGCAGGAACCGGGCCAGTACTGCGCCCAGGGCGCAGCAGAGCGCTGGGGAGGAACAAAGGCGGCGCCTAGGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295766.9 |
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| CDS CCA 90 bp | GCCTTTGTTCCTCCCCAGCGCTCTGCTGCGCCCTGGGCGCAGTACTaGCCCGGTTCCTGCACCCGCACTGCGGCGGCGGCGGGGCTTGAG | + |
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Preference number: 5 (lower is better) Translates to: AFVPPQRSAAPWAQY*PGSCTRTAAAAGLE Trigger: CTCAAGCCCCGCCGCCGCCGCAGTGCGGGTGCAGGAACCGGGCCAGTACTGCGCCCAGGGCGCAGCAGAGCGCTGGGGAGGAACAAAGGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295766.9 |
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| CDS GCA 90 bp | ACACAGGCGCCTAGGCGCCGCCTTTGTTCCTCCCCAGCGCTCTGCTaGGCCCTGGGCGCAGTACTGGCCCGGTTCCTGCACCCGCACTGC | + |
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Preference number: 5 (lower is better) Translates to: TQAPRRRLCSSPALC*ALGAVLARFLHPHC Trigger: GCAGTGCGGGTGCAGGAACCGGGCCAGTACTGCGCCCAGGGCGCAGCAGAGCGCTGGGGAGGAACAAAGGCGGCGCCTAGGCGCCTGTGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295766.9 |
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| CDS GCA 90 bp | ATAACACAGGCGCCTAGGCGCCGCCTTTGTTCCTCCCCAGCGCTCTaGTGCGCCCTGGGCGCAGTACTGGCCCGGTTCCTGCACCCGCAC | + |
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Preference number: 5 (lower is better) Translates to: ITQAPRRRLCSSPAL*CALGAVLARFLHPH Trigger: GTGCGGGTGCAGGAACCGGGCCAGTACTGCGCCCAGGGCGCAGCAGAGCGCTGGGGAGGAACAAAGGCGGCGCCTAGGCGCCTGTGTTAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295766.9 |
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| CDS GCA 90 bp | TCCACCCAACGGCCACAAAGAGCCGAAGCCGATTCTCACCATGGTTaGTGCTTCGCGACTGCCGAGCTGATGGCGGAGACGAAGAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: STQRPQRAEADSHHG*CFATAELMAETKRR Trigger: TCTCCTCTTCGTCTCCGCCATCAGCTCGGCAGTCGCGAAGCAGCAACCATGGTGAGAATCGGCTTCGGCTCTTTGTGGCCGTTGGGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552924.2 |
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| CDS CCA 90 bp | GGGTGTGGTCTGAATAATGATGTCGCCTTGGCCCTGTTCAGCACGTaGTACCAGCCCATTGTGCCTACTACCATGCATGGTTGCTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: GCGLNNDVALALFST*YQPIVPTTMHGCCF Trigger: GAAGCAGCAACCATGCATGGTAGTAGGCACAATGGGCTGGTACCACGTGCTGAACAGGGCCAAGGCGACATCATTATTCAGACCACACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550767.6 |
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| CDS TCA 90 bp | GGAGATGCACTCACGCTGCTACAAATGCTGCATATGGGTGTGGTCTaGATAATGATGTCGCCTTGGCCCTGTTCAGCACGTGGTACCAGC | + |
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Preference number: 5 (lower is better) Translates to: GDALTLLQMLHMGVV*IMMSPWPCSARGTS Trigger: GCTGGTACCACGTGCTGAACAGGGCCAAGGCGACATCATTATTCAGACCACACCCATATGCAGCATTTGTAGCAGCGTGAGTGCATCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000547939.6 ENST00000550767.6 |
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| CDS GCA 90 bp | ATCCGGACATCTGTACTGCAGCTGAGGCAAGAAGCCACACCCTTCTaGAGTCTGTCTGCAGAATCCATCAATACTAGGAGTTTAGACAAG | + |
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Preference number: 5 (lower is better) Translates to: IRTSVLQLRQEATPF*SLSAESINTRSLDK Trigger: CTTGTCTAAACTCCTAGTATTGATGGATTCTGCAGACAGACTGCAGAAGGGTGTGGCTTCTTGCCTCAGCTGCAGTACAGATGTCCGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000547939.6 ENST00000550811.2 |
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| CDS TCA 90 bp | ATTAAGGAAAATCACCTGCTACAAATGCTGCATATGGGTGTGGTCTaGATAATGATGTCGCCTTGGCCCTGTTCAGCACGTGGTACCAGC | + |
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Preference number: 5 (lower is better) Translates to: IKENHLLQMLHMGVV*IMMSPWPCSARGTS Trigger: GCTGGTACCACGTGCTGAACAGGGCCAAGGCGACATCATTATTCAGACCACACCCATATGCAGCATTTGTAGCAGGTGATTTTCCTTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550811.2 |
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| CDS GCA 90 bp | TCCATCAATACTAGGAGTTTAGACAAGGTCTGCCTTCTGCATTGCTaGATTGCTGTATTTGCTGTGCCTGGTGCTAGCCTGTACTGTCTG | + |
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Preference number: 5 (lower is better) Translates to: SINTRSLDKVCLLHC*IAVFAVPGASLYCL Trigger: CAGACAGTACAGGCTAGCACCAGGCACAGCAAATACAGCAATGCAGCAATGCAGAAGGCAGACCTTGTCTAAACTCCTAGTATTGATGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000547939.6 ENST00000550811.2 |
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| CDS GCA 90 bp | AGTCTGTCTGCAGAATCCATCAATACTAGGAGTTTAGACAAGGTCTaGCTTCTGCATTGCTGCATTGCTGTATTTGCTGTGCCTGGTGCT | + |
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Preference number: 5 (lower is better) Translates to: SLSAESINTRSLDKV*LLHCCIAVFAVPGA Trigger: AGCACCAGGCACAGCAAATACAGCAATGCAGCAATGCAGAAGGCAGACCTTGTCTAAACTCCTAGTATTGATGGATTCTGCAGACAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000547939.6 ENST00000550811.2 |
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| CDS GCA 90 bp | ATGATGTCGCCTTGGCCCTGTTCAGCACGTGGTACCAGCCCATTGTaGCTACTACCATGCTTGAATAGAAGATTTTTCATATTTAAAAAG | + |
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Preference number: 5 (lower is better) Translates to: MMSPWPCSARGTSPL*LLPCLNRRFFIFKK Trigger: CTTTTTAAATATGAAAAATCTTCTATTCAAGCATGGTAGTAGGCACAATGGGCTGGTACCACGTGCTGAACAGGGCCAAGGCGACATCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000547939.6 ENST00000550811.2 |
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| CDS GCA 90 bp | CTGTCTGCTACATTATTTAACAGAGCAAGCTCTATTTCCAGCAGCTaGCTACATGATCTCATTGTGCTGTTTTGCCAGTTTTCCTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: LSATLFNRASSISSS*LHDLIVLFCQFSSS Trigger: AGAGGAGGAAAACTGGCAAAACAGCACAATGAGATCATGTAGGCAGCTGCTGGAAATAGAGCTTGCTCTGTTAAATAATGTAGCAGACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550811.2 |
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| CDS GCA 90 bp | TGGCCCTGTTCAGCACGTGGTACCAGCCCATTGTGCCTACTACCATaGTTGAATAGAAGATTTTTCATATTTAAAAAGTATTCAGTATTC | + |
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Preference number: 5 (lower is better) Translates to: WPCSARGTSPLCLLP*LNRRFFIFKKYSVF Trigger: GAATACTGAATACTTTTTAAATATGAAAAATCTTCTATTCAAGCATGGTAGTAGGCACAATGGGCTGGTACCACGTGCTGAACAGGGCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000547939.6 ENST00000550811.2 |
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| CDS CCA 72 bp | CCTCCCCAGCGCTCTGCTGCGCCCTGGGCGCAGTACTaGCCCGGTTCCTGCACCCGCACTGCGGCGGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: PPQRSAAPWAQY*PGSCTRTAAAA Trigger: CGCCGCCGCCGCAGTGCGGGTGCAGGAACCGGGCCAGTACTGCGCCCAGGGCGCAGCAGAGCGCTGGGGAGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295766.9 |
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| CDS GCA 72 bp | TCTGCTGCGCCCTGGGCGCAGTACTGGCCCGGTTCCTaGACCCGCACTGCGGCGGCGGCGGGGCTTGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: SAAPWAQYWPGS*TRTAAAAGLED Trigger: ATCCTCAAGCCCCGCCGCCGCCGCAGTGCGGGTGCAGGAACCGGGCCAGTACTGCGCCCAGGGCGCAGCAGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295766.9 |
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| CDS GCA 72 bp | GCGCCTAGGCGCCGCCTTTGTTCCTCCCCAGCGCTCTaGTGCGCCCTGGGCGCAGTACTGGCCCGGTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: APRRRLCSSPAL*CALGAVLARFL Trigger: CAGGAACCGGGCCAGTACTGCGCCCAGGGCGCAGCAGAGCGCTGGGGAGGAACAAAGGCGGCGCCTAGGCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295766.9 |
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| CDS GCA 72 bp | CCTAGGCGCCGCCTTTGTTCCTCCCCAGCGCTCTGCTaGGCCCTGGGCGCAGTACTGGCCCGGTTCCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: PRRRLCSSPALC*ALGAVLARFLH Trigger: GTGCAGGAACCGGGCCAGTACTGCGCCCAGGGCGCAGCAGAGCGCTGGGGAGGAACAAAGGCGGCGCCTAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295766.9 |
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| CDS CCA 72 bp | GCCGCCTTTGTTCCTCCCCAGCGCTCTGCTGCGCCCTaGGCGCAGTACTGGCCCGGTTCCTGCACCCGCACT | + |
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Preference number: 6 (lower is better) Translates to: AAFVPPQRSAAP*AQYWPGSCTRT Trigger: AGTGCGGGTGCAGGAACCGGGCCAGTACTGCGCCCAGGGCGCAGCAGAGCGCTGGGGAGGAACAAAGGCGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295766.9 |
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| CDS CAA 90 bp | CCAAAGACCGCGGAGGGTCTTCCCACGCTAACCCTAGGCTGCGCTTaGTTCCCGTTCCCCCTCCCACGTCCCCCAGCTCGCCCAACGCCC | + |
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Preference number: 6 (lower is better) Translates to: PKTAEGLPTLTLGCA*FPFPLPRPPARPTP Trigger: GGGCGTTGGGCGAGCTGGGGGACGTGGGAGGGGGAACGGGAACAAAGCGCAGCCTAGGGTTAGCGTGGGAAGACCCTCCGCGGTCTTTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000295766.9 |
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| CDS CAA 72 bp | GCGGAGGGTCTTCCCACGCTAACCCTAGGCTGCGCTTaGTTCCCGTTCCCCCTCCCACGTCCCCCAGCTCGC | + |
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Preference number: 6 (lower is better) Translates to: AEGLPTLTLGCA*FPFPLPRPPAR Trigger: GCGAGCTGGGGGACGTGGGAGGGGGAACGGGAACAAAGCGCAGCCTAGGGTTAGCGTGGGAAGACCCTCCGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000295766.9 |
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| CDS GCA 72 bp | AAGACCGCGGAGGGTCTTCCCACGCTAACCCTAGGCTaGGCTTTGTTCCCGTTCCCCCTCCCACGTCCCCCA | + |
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Preference number: 6 (lower is better) Translates to: KTAEGLPTLTLG*ALFPFPLPRPP Trigger: TGGGGGACGTGGGAGGGGGAACGGGAACAAAGCGCAGCCTAGGGTTAGCGTGGGAAGACCCTCCGCGGTCTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000295766.9 |
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| CDS GCA 72 bp | CGGCCACAAAGAGCCGAAGCCGATTCTCACCATGGTTaGTGCTTCGCGACTGCCGAGCTGATGGCGGAGACG | + |
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Preference number: 6 (lower is better) Translates to: RPQRAEADSHHG*CFATAELMAET Trigger: CGTCTCCGCCATCAGCTCGGCAGTCGCGAAGCAGCAACCATGGTGAGAATCGGCTTCGGCTCTTTGTGGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552924.2 |
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| CDS CAA 90 bp | CTCCACCCAACGGCCACAAAGAGCCGAAGCCGATTCTCACCATGGTaGCTGCTTCGCGACTGCCGAGCTGATGGCGGAGACGAAGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LHPTATKSRSRFSPW*LLRDCRADGGDEEE Trigger: CTCCTCTTCGTCTCCGCCATCAGCTCGGCAGTCGCGAAGCAGCAACCATGGTGAGAATCGGCTTCGGCTCTTTGTGGCCGTTGGGTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552924.2 |
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| CDS CCA 72 bp | TCTCCCGGTCCCCAGAGAACAACGCGAGACAGAAAGTaGCCCCTCAGCATCAGCGAAACCGTGCGCACAGAC | + |
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Preference number: 6 (lower is better) Translates to: SPGPQRTTRDRK*PLSISETVRTD Trigger: GTCTGTGCGCACGGTTTCGCTGATGCTGAGGGGCCACTTTCTGTCTCGCGTTGTTCTCTGGGGACCGGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295766.9 |
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| CDS CCA 72 bp | CCAACGGCCACAAAGAGCCGAAGCCGATTCTCACCATaGTTGCTGCTTCGCGACTGCCGAGCTGATGGCGGA | + |
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Preference number: 6 (lower is better) Translates to: PTATKSRSRFSP*LLLRDCRADGG Trigger: TCCGCCATCAGCTCGGCAGTCGCGAAGCAGCAACCATGGTGAGAATCGGCTTCGGCTCTTTGTGGCCGTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552924.2 |
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| CDS CAA 72 bp | ACGGCCACAAAGAGCCGAAGCCGATTCTCACCATGGTaGCTGCTTCGCGACTGCCGAGCTGATGGCGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: TATKSRSRFSPW*LLRDCRADGGD Trigger: GTCTCCGCCATCAGCTCGGCAGTCGCGAAGCAGCAACCATGGTGAGAATCGGCTTCGGCTCTTTGTGGCCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552924.2 |
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| CDS GCA 72 bp | CCACAAAGAGCCGAAGCCGATTCTCACCATGGTTGCTaGTTCGCGACTGCCGAGCTGATGGCGGAGACGAAG | + |
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Preference number: 6 (lower is better) Translates to: PQRAEADSHHGC*FATAELMAETK Trigger: CTTCGTCTCCGCCATCAGCTCGGCAGTCGCGAAGCAGCAACCATGGTGAGAATCGGCTTCGGCTCTTTGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552924.2 |
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| CDS TCA 72 bp | GAGCTTAAAGGTTTTCCAAGTAGAGCCTGGGGGCGCTaGCTCCACCCAACGGCCACAAAGAGCCGAAGCCGA | + |
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Preference number: 6 (lower is better) Translates to: ELKGFPSRAWGR*LHPTATKSRSR Trigger: TCGGCTTCGGCTCTTTGTGGCCGTTGGGTGGAGTCAGCGCCCCCAGGCTCTACTTGGAAAACCTTTAAGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000552924.2 |
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| CDS GCA 72 bp | CCTTGGCCCTGTTCAGCACGTGGTACCAGCCCATTGTaGCTACTACCATGCATGGTTGCTGCTTCGCGACTG | + |
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Preference number: 6 (lower is better) Translates to: PWPCSARGTSPL*LLPCMVAASRL Trigger: CAGTCGCGAAGCAGCAACCATGCATGGTAGTAGGCACAATGGGCTGGTACCACGTGCTGAACAGGGCCAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550767.6 |
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| CDS CAA 72 bp | TCGCCTTGGCCCTGTTCAGCACGTGGTACCAGCCCATaGTGCCTACTACCATGCATGGTTGCTGCTTCGCGA | + |
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Preference number: 6 (lower is better) Translates to: SPWPCSARGTSP*CLLPCMVAASR Trigger: TCGCGAAGCAGCAACCATGCATGGTAGTAGGCACAATGGGCTGGTACCACGTGCTGAACAGGGCCAAGGCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550767.6 |
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| CDS CCA 72 bp | TGGAGATGCACTCACGCATGTTTTCCCGGGAATGTGTaGGTATCTTTCCAAAACGCCAAAGACCGCGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: WRCTHACFPGNV*VSFQNAKDRGG Trigger: CCCTCCGCGGTCTTTGGCGTTTTGGAAAGATACCCACACATTCCCGGGAAAACATGCGTGAGTGCATCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295766.9 |
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| CDS CAA 72 bp | GCTGCATATGGGTGTGGTCTGAATAATGATGTCGCCTaGGCCCTGTTCAGCACGTGGTACCAGCCCATTGTG | + |
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Preference number: 6 (lower is better) Translates to: AAYGCGLNNDVA*ALFSTWYQPIV Trigger: CACAATGGGCTGGTACCACGTGCTGAACAGGGCCAAGGCGACATCATTATTCAGACCACACCCATATGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000547939.6 ENST00000550767.6 ENST00000550811.2 |
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| CDS CCA 72 bp | CTGAATAATGATGTCGCCTTGGCCCTGTTCAGCACGTaGTACCAGCCCATTGTGCCTACTACCATGCATGGT | + |
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Preference number: 6 (lower is better) Translates to: LNNDVALALFST*YQPIVPTTMHG Trigger: ACCATGCATGGTAGTAGGCACAATGGGCTGGTACCACGTGCTGAACAGGGCCAAGGCGACATCATTATTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550767.6 |
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| CDS CAA 90 bp | GCTACAAATGCTGCATATGGGTGTGGTCTGAATAATGATGTCGCCTaGGCCCTGTTCAGCACGTGGTACCAGCCCATTGTGCCTACTACC | + |
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Preference number: 6 (lower is better) Translates to: ATNAAYGCGLNNDVA*ALFSTWYQPIVPTT Trigger: GGTAGTAGGCACAATGGGCTGGTACCACGTGCTGAACAGGGCCAAGGCGACATCATTATTCAGACCACACCCATATGCAGCATTTGTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000547939.6 ENST00000550767.6 ENST00000550811.2 |
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| CDS TCA 72 bp | CTCACGCTGCTACAAATGCTGCATATGGGTGTGGTCTaGATAATGATGTCGCCTTGGCCCTGTTCAGCACGT | + |
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Preference number: 6 (lower is better) Translates to: LTLLQMLHMGVV*IMMSPWPCSAR Trigger: ACGTGCTGAACAGGGCCAAGGCGACATCATTATTCAGACCACACCCATATGCAGCATTTGTAGCAGCGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000547939.6 ENST00000550767.6 |
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| CDS CCA 72 bp | CTGAATAATGATGTCGCCTTGGCCCTGTTCAGCACGTaGTACCAGCCCATTGTGCCTACTACCATGCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: LNNDVALALFST*YQPIVPTTMLE Trigger: TTCAAGCATGGTAGTAGGCACAATGGGCTGGTACCACGTGCTGAACAGGGCCAAGGCGACATCATTATTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000547939.6 ENST00000550811.2 |
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| CDS CAA 72 bp | TCGCCTTGGCCCTGTTCAGCACGTGGTACCAGCCCATaGTGCCTACTACCATGCTTGAATAGAAGATTTTTC | + |
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Preference number: 6 (lower is better) Translates to: SPWPCSARGTSP*CLLPCLNRRFF Trigger: GAAAAATCTTCTATTCAAGCATGGTAGTAGGCACAATGGGCTGGTACCACGTGCTGAACAGGGCCAAGGCGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000547939.6 ENST00000550811.2 |
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| CDS TCA 72 bp | AATCACCTGCTACAAATGCTGCATATGGGTGTGGTCTaGATAATGATGTCGCCTTGGCCCTGTTCAGCACGT | + |
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Preference number: 6 (lower is better) Translates to: NHLLQMLHMGVV*IMMSPWPCSAR Trigger: ACGTGCTGAACAGGGCCAAGGCGACATCATTATTCAGACCACACCCATATGCAGCATTTGTAGCAGGTGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550811.2 |
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| CDS GCA 72 bp | CCTTGGCCCTGTTCAGCACGTGGTACCAGCCCATTGTaGCTACTACCATGCTTGAATAGAAGATTTTTCATA | + |
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Preference number: 6 (lower is better) Translates to: PWPCSARGTSPL*LLPCLNRRFFI Trigger: TATGAAAAATCTTCTATTCAAGCATGGTAGTAGGCACAATGGGCTGGTACCACGTGCTGAACAGGGCCAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000547939.6 ENST00000550811.2 |
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| CDS GCA 72 bp | GCAGAATCCATCAATACTAGGAGTTTAGACAAGGTCTaGCTTCTGCATTGCTGCATTGCTGTATTTGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: AESINTRSLDKV*LLHCCIAVFAV Trigger: CACAGCAAATACAGCAATGCAGCAATGCAGAAGGCAGACCTTGTCTAAACTCCTAGTATTGATGGATTCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000547939.6 ENST00000550811.2 |
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| CDS CAA 90 bp | ATAATGATGTCGCCTTGGCCCTGTTCAGCACGTGGTACCAGCCCATaGTGCCTACTACCATGCTTGAATAGAAGATTTTTCATATTTAAA | + |
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Preference number: 6 (lower is better) Translates to: IMMSPWPCSARGTSP*CLLPCLNRRFFIFK Trigger: TTTAAATATGAAAAATCTTCTATTCAAGCATGGTAGTAGGCACAATGGGCTGGTACCACGTGCTGAACAGGGCCAAGGCGACATCATTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000547939.6 ENST00000550811.2 |
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| CDS GCA 72 bp | TCAGCACGTGGTACCAGCCCATTGTGCCTACTACCATaGTTGAATAGAAGATTTTTCATATTTAAAAAGTAT | + |
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Preference number: 6 (lower is better) Translates to: SARGTSPLCLLP*LNRRFFIFKKY Trigger: ATACTTTTTAAATATGAAAAATCTTCTATTCAAGCATGGTAGTAGGCACAATGGGCTGGTACCACGTGCTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000547939.6 ENST00000550811.2 |
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