RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TUB (Homo sapiens)

Ensembl gene IDs: ENSG00000166402

Ensembl transcript IDs: ENST00000299506.3, ENST00000305253.8, ENST00000534099.5

Found 780 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCATCTGACTCCTTGGCTGAGCGGACGACTGGGCCACAGCAGCCCTaGAGTGTGCTTCCTCTCCCTCTATGCCTCTTGCGGCCTTCCCAG +
Preference number: 1 (lower is better)
Translates to: PSDSLAERTTGPQQP*SVLPLPLCLLRPSQ
Trigger: CTGGGAAGGCCGCAAGAGGCATAGAGGGAGAGGAAGCACACTGCAGGGCTGCTGTGGCCCAGTCGTCCGCTCAGCCAAGGAGTCAGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 90 bp CTCTCCCACCTAGACCGAGAAGTGTGCAGCAGCCGTACTAAGGCCTaGTTACTGCTGAGTAGCCCTCGCGGAGGGGCCAGACACAGGCCA +
Preference number: 1 (lower is better)
Translates to: LSHLDREVCSSRTKA*LLLSSPRGGARHRP
Trigger: TGGCCTGTGTCTGGCCCCTCCGCGAGGGCTACTCAGCAGTAAGCAGGCCTTAGTACGGCTGCTGCACACTTCTCGGTCTAGGTGGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR TCA 90 bp GCAGCAGGATTCCCAGGCATGCCTAGCTGTGTGCAGTCAGGCTGGTaGCCTGGACCCCATTTGTGTTTCCTGGGGGTTGTGCTGGGCTGC +
Preference number: 1 (lower is better)
Translates to: AAGFPGMPSCVQSGW*PGPHLCFLGVVLGC
Trigger: GCAGCCCAGCACAACCCCCAGGAAACACAAATGGGGTCCAGGTCACCAGCCTGACTGCACACAGCTAGGCATGCCTGGGAATCCTGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 90 bp ACGACTGGGCCACAGCAGCCCTGCAGTGTGCTTCCTCTCCCTCTATaGCTCTTGCGGCCTTCCCAGCTGAAGAGGTTGCTCAGCTTGGTA +
Preference number: 1 (lower is better)
Translates to: TTGPQQPCSVLPLPL*LLRPSQLKRLLSLV
Trigger: TACCAAGCTGAGCAACCTCTTCAGCTGGGAAGGCCGCAAGAGGCATAGAGGGAGAGGAAGCACACTGCAGGGCTGCTGTGGCCCAGTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR TCA 90 bp CATGCTGAGCCTGTGTCTTGCAGGGCCCATCCACCAAGACAGCCCTaGGAGCTGGGTTCCTACTGCCTCTGTGAGACACAGCAAACCTGG +
Preference number: 1 (lower is better)
Translates to: HAEPVSCRAHPPRQP*ELGSYCLCETQQTW
Trigger: CCAGGTTTGCTGTGTCTCACAGAGGCAGTAGGAACCCAGCTCTCAGGGCTGTCTTGGTGGATGGGCCCTGCAAGACACAGGCTCAGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR TCA 90 bp AGCAGAGAGCTCCTGGGGAAGCTGACAGGACTCCCAGAACAACCCTaGTCCAGGGACCCTGTTCATGCACTTCTGCATGCTGAGCCTGTG +
Preference number: 1 (lower is better)
Translates to: SRELLGKLTGLPEQP*SRDPVHALLHAEPV
Trigger: CACAGGCTCAGCATGCAGAAGTGCATGAACAGGGTCCCTGGATCAGGGTTGTTCTGGGAGTCCTGTCAGCTTCCCCAGGAGCTCTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 90 bp GACTCCCAGAACAACCCTGATCCAGGGACCCTGTTCATGCACTTCTaGATGCTGAGCCTGTGTCTTGCAGGGCCCATCCACCAAGACAGC +
Preference number: 1 (lower is better)
Translates to: DSQNNPDPGTLFMHF*MLSLCLAGPIHQDS
Trigger: GCTGTCTTGGTGGATGGGCCCTGCAAGACACAGGCTCAGCATGCAGAAGTGCATGAACAGGGTCCCTGGATCAGGGTTGTTCTGGGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 90 bp GCCCCAGAACCTTTATGCACTCTCTCCCACCTAGACCGAGAAGTGTaGAGCAGCCGTACTAAGGCCTGCTTACTGCTGAGTAGCCCTCGC +
Preference number: 1 (lower is better)
Translates to: APEPLCTLSHLDREV*SSRTKACLLLSSPR
Trigger: GCGAGGGCTACTCAGCAGTAAGCAGGCCTTAGTACGGCTGCTGCACACTTCTCGGTCTAGGTGGGAGAGAGTGCATAAAGGTTCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR TCA 90 bp AGAACAACCCTGATCCAGGGACCCTGTTCATGCACTTCTGCATGCTaGGCCTGTGTCTTGCAGGGCCCATCCACCAAGACAGCCCTGAGA +
Preference number: 1 (lower is better)
Translates to: RTTLIQGPCSCTSAC*ACVLQGPSTKTALR
Trigger: TCTCAGGGCTGTCTTGGTGGATGGGCCCTGCAAGACACAGGCTCAGCATGCAGAAGTGCATGAACAGGGTCCCTGGATCAGGGTTGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 90 bp ATACATACACACATTCACTGTGCCCCTACCTGCTGGAGTACCCATTaGCATCTGACTCCTTGGCTGAGCGGACGACTGGGCCACAGCAGC +
Preference number: 1 (lower is better)
Translates to: IHTHIHCAPTCWSTH*HLTPWLSGRLGHSS
Trigger: GCTGCTGTGGCCCAGTCGTCCGCTCAGCCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGCACAGTGAATGTGTGTATGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 90 bp AGTTGCGTTCTAGGAAACTCTGGATCTCAGCCTCATCTCCAGCTTTaGCTGGACCTTGCTAGGGGGAGGGAGGGACAGGAGCACAGAGGA +
Preference number: 1 (lower is better)
Translates to: SCVLGNSGSQPHLQL*LDLARGREGQEHRG
Trigger: TCCTCTGTGCTCCTGTCCCTCCCTCCCCCTAGCAAGGTCCAGGCAAAGCTGGAGATGAGGCTGAGATCCAGAGTTTCCTAGAACGCAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 90 bp GGAGAGATTCTTCAAGGAGCATGCCATGGCTTGGGAATGGTTCTCTaGCAGCAGGATTCCCAGGCATGCCTAGCTGTGTGCAGTCAGGCT +
Preference number: 1 (lower is better)
Translates to: GEILQGACHGLGMVL*QQDSQACLAVCSQA
Trigger: AGCCTGACTGCACACAGCTAGGCATGCCTGGGAATCCTGCTGCCAGAGAACCATTCCCAAGCCATGGCATGCTCCTTGAAGAATCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 90 bp GATGTGGCCTTCATACATACACACATTCACTGTGCCCCTACCTGCTaGAGTACCCATTGCCATCTGACTCCTTGGCTGAGCGGACGACTG +
Preference number: 1 (lower is better)
Translates to: DVAFIHTHIHCAPTC*STHCHLTPWLSGRL
Trigger: CAGTCGTCCGCTCAGCCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGCACAGTGAATGTGTGTATGTATGAAGGCCACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 90 bp ACAAACCTACAGACCAGAGCCCAGGGTAGTATAGAGTCCCAACTCTaGGCCCTGACTGCAGGTCATTCAGGTCCCAGTCACAGTGAAAGC +
Preference number: 1 (lower is better)
Translates to: TNLQTRAQGSIESQL*ALTAGHSGPSHSES
Trigger: GCTTTCACTGTGACTGGGACCTGAATGACCTGCAGTCAGGGCCCAGAGTTGGGACTCTATACTACCCTGGGCTCTGGTCTGTAGGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 90 bp GTTGATGTGGCCTTCATACATACACACATTCACTGTGCCCCTACCTaGTGGAGTACCCATTGCCATCTGACTCCTTGGCTGAGCGGACGA +
Preference number: 1 (lower is better)
Translates to: VDVAFIHTHIHCAPT*WSTHCHLTPWLSGR
Trigger: TCGTCCGCTCAGCCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGCACAGTGAATGTGTGTATGTATGAAGGCCACATCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 90 bp CTCCTGACCGAGCAGTCAGGCTTCCCTTTCCTAGCCATCCTAAGTTaGGTTCTAGGAAACTCTGGATCTCAGCCTCATCTCCAGCTTTGC +
Preference number: 1 (lower is better)
Translates to: LLTEQSGFPFLAILS*VLGNSGSQPHLQLC
Trigger: GCAAAGCTGGAGATGAGGCTGAGATCCAGAGTTTCCTAGAACGCAACTTAGGATGGCTAGGAAAGGGAAGCCTGACTGCTCGGTCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 90 bp AGTCTAGGCATTGTGAAAACTGGCTGTGTTCCCAGCAAGAGATACTaGACCCTCCTGACCGAGCAGTCAGGCTTCCCTTTCCTAGCCATC +
Preference number: 1 (lower is better)
Translates to: SLGIVKTGCVPSKRY*TLLTEQSGFPFLAI
Trigger: GATGGCTAGGAAAGGGAAGCCTGACTGCTCGGTCAGGAGGGTGCAGTATCTCTTGCTGGGAACACAGCCAGTTTTCACAATGCCTAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 90 bp CTAATCGTTGGAGGGGGTCTCTCACAGAGATGTACGGCCGAGGTGTaGGCAGATCCTGCTAGGACAGGTATGCCTTGCTTTAAGCATTCA +
Preference number: 1 (lower is better)
Translates to: LIVGGGLSQRCTAEV*ADPARTGMPCFKHS
Trigger: TGAATGCTTAAAGCAAGGCATACCTGTCCTAGCAGGATCTGCCCACACCTCGGCCGTACATCTCTGTGAGAGACCCCCTCCAACGATTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 90 bp AGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACATAAAGTTGATGTaGCCTTCATACATACACACATTCACTGTGCCCCTACCTGCTGGA +
Preference number: 1 (lower is better)
Translates to: RARLGHQALCYIKLM*PSYIHTFTVPLPAG
Trigger: TCCAGCAGGTAGGGGCACAGTGAATGTGTGTATGTATGAAGGCCACATCAACTTTATGTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 90 bp GTATCTCGCCAGCGCTGGCACAAAGTTCTAGTGCCCTCTAGAAACTaGACCATGTTGCAAAAGCTAATCGTTGGAGGGGGTCTCTCACAG +
Preference number: 1 (lower is better)
Translates to: VSRQRWHKVLVPSRN*TMLQKLIVGGGLSQ
Trigger: CTGTGAGAGACCCCCTCCAACGATTAGCTTTTGCAACATGGTCCAGTTTCTAGAGGGCACTAGAACTTTGTGCCAGCGCTGGCGAGATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 90 bp ACAGACGCACAGACACACACATACACAGACGGACACAGAGCACCTTaGAGCCAGAAGGAAAGGAAAGCTAGACTTGGAGAAGAGTTGGGG +
Preference number: 1 (lower is better)
Translates to: TDAQTHTYTDGHRAP*SQKERKARLGEELG
Trigger: CCCCAACTCTTCTCCAAGTCTAGCTTTCCTTTCCTTCTGGCTCCAAGGTGCTCTGTGTCCGTCTGTGTATGTGTGTGTCTGTGCGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 90 bp GCAGACTCATTCAGCTATCTGGAGAAGTGTAATCTGAGGGCCACTTaGCATCCTGAGTTAACACAGGGATGCCGCAGCTGGGGTAAGGAA +
Preference number: 1 (lower is better)
Translates to: ADSFSYLEKCNLRAT*HPELTQGCRSWGKE
Trigger: TTCCTTACCCCAGCTGCGGCATCCCTGTGTTAACTCAGGATGCCAAGTGGCCCTCAGATTACACTTCTCCAGATAGCTGAATGAGTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 90 bp AAGTGTAATCTGAGGGCCACTTGGCATCCTGAGTTAACACAGGGATaGCGCAGCTGGGGTAAGGAATTAGAGAAGGGAAGGCCAGTGTTA +
Preference number: 1 (lower is better)
Translates to: KCNLRATWHPELTQG*RSWGKELEKGRPVL
Trigger: TAACACTGGCCTTCCCTTCTCTAATTCCTTACCCCAGCTGCGGCATCCCTGTGTTAACTCAGGATGCCAAGTGGCCCTCAGATTACACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR TCA 90 bp CTATCCTTCTCCACACTTAGGCTAGAAAGCTCAGCCTGTCTTTCCTaGCTCCACCAAAAGATCCAGCCAACTCCCTCTTTGTGCTACAGG +
Preference number: 1 (lower is better)
Translates to: LSFSTLRLESSACLS*LHQKIQPTPSLCYR
Trigger: CCTGTAGCACAAAGAGGGAGTTGGCTGGATCTTTTGGTGGAGTCAGGAAAGACAGGCTGAGCTTTCTAGCCTAAGTGTGGAGAAGGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 90 bp TCCCTGCTTTATTCACCCTGTCCCATTCCCTCCCAAGAACCTACATaGTTACCAACCATGACTTGGCTGACAGCAGTGAGAAAGTTGGGT +
Preference number: 1 (lower is better)
Translates to: SLLYSPCPIPSQEPT*LPTMTWLTAVRKLG
Trigger: ACCCAACTTTCTCACTGCTGTCAGCCAAGTCATGGTTGGTAACCATGTAGGTTCTTGGGAGGGAATGGGACAGGGTGAATAAAGCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 90 bp TGGAACTATAGAAAGGAGGATGGCACCATGGTATCTCGCCAGCGCTaGCACAAAGTTCTAGTGCCCTCTAGAAACTGGACCATGTTGCAA +
Preference number: 1 (lower is better)
Translates to: WNYRKEDGTMVSRQR*HKVLVPSRNWTMLQ
Trigger: TTGCAACATGGTCCAGTTTCTAGAGGGCACTAGAACTTTGTGCCAGCGCTGGCGAGATACCATGGTGCCATCCTCCTTTCTATAGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 90 bp CACCTTGGAGCCAGAAGGAAAGGAAAGCTAGACTTGGAGAAGAGTTaGGGAAGTGAACTTCACCACTCTGCAGAATTGTTCTGGGGCAGA +
Preference number: 1 (lower is better)
Translates to: HLGARRKGKLDLEKS*GSELHHSAELFWGR
Trigger: TCTGCCCCAGAACAATTCTGCAGAGTGGTGAAGTTCACTTCCCCAACTCTTCTCCAAGTCTAGCTTTCCTTTCCTTCTGGCTCCAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 90 bp CACTCAGCTACTGATGCTTGTCATTCAATGCCTGACAGAGTTTTGTaGCTGAGGCTATCCTTCTCCACACTTAGGCTAGAAAGCTCAGCC +
Preference number: 1 (lower is better)
Translates to: HSATDACHSMPDRVL*LRLSFSTLRLESSA
Trigger: GGCTGAGCTTTCTAGCCTAAGTGTGGAGAAGGATAGCCTCAGCCACAAAACTCTGTCAGGCATTGAATGACAAGCATCAGTAGCTGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 90 bp CTGAAAATTCCAGGTGGCCATAAACTCAAACAAGAGCCTAGCCCTTaGCTTATTACCGGTGGCTACTACAAACCTACAGACCAGAGCCCA +
Preference number: 1 (lower is better)
Translates to: LKIPGGHKLKQEPSP*LITGGYYKPTDQSP
Trigger: TGGGCTCTGGTCTGTAGGTTTGTAGTAGCCACCGGTAATAAGCCAAGGGCTAGGCTCTTGTTTGAGTTTATGGCCACCTGGAATTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR TCA 90 bp CTTGTCACTGAAGGAGGCAGGCTCCGAAAGTTCTCTTATAGCTTCTaGTTATCACAGTCCTGGCTTCCAACACCTGTGTTCGCCATAGAT +
Preference number: 1 (lower is better)
Translates to: LVTEGGRLRKFSYSF*LSQSWLPTPVFAID
Trigger: ATCTATGGCGAACACAGGTGTTGGAAGCCAGGACTGTGATAATCAGAAGCTATAAGAGAACTTTCGGAGCCTGCCTCCTTCAGTGACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 90 bp CTTCTGAAGTTGAAGGGCTTTCTGCAGTTGTTTAAGGGCCAGGCTTaGCCACCAAGCCCTTTGCTACATAAAGTTGATGTGGCCTTCATA +
Preference number: 1 (lower is better)
Translates to: LLKLKGFLQLFKGQA*PPSPLLHKVDVAFI
Trigger: TATGAAGGCCACATCAACTTTATGTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAGAAAGCCCTTCAACTTCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 90 bp GAAGTCCATCTAGGAGATGAAATTTGTGCTTGCATAACAGAGCCATaGAAATGGCTATCCCAGCATCTCCCCTCACTGCAGACTCCATTG +
Preference number: 1 (lower is better)
Translates to: EVHLGDEICACITEP*KWLSQHLPSLQTPL
Trigger: CAATGGAGTCTGCAGTGAGGGGAGATGCTGGGATAGCCATTTCCATGGCTCTGTTATGCAAGCACAAATTTCATCTCCTAGATGGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 90 bp CAATCTTGTGCAAATAGACATACACAGTCTAGGCATTGTGAAAACTaGCTGTGTTCCCAGCAAGAGATACTGCACCCTCCTGACCGAGCA +
Preference number: 1 (lower is better)
Translates to: QSCANRHTQSRHCEN*LCSQQEILHPPDRA
Trigger: TGCTCGGTCAGGAGGGTGCAGTATCTCTTGCTGGGAACACAGCCAGTTTTCACAATGCCTAGACTGTGTATGTCTATTTGCACAAGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR TCA 90 bp CAATTTCAGATCTCTATCTGGGCAAGAAGCCTCCACCAGGGTAAATaGCAAATGAGCAAAAGCTTGAGCTTACAGTTCCCAAGCCTGCAG +
Preference number: 1 (lower is better)
Translates to: QFQISIWARSLHQGK*QMSKSLSLQFPSLQ
Trigger: CTGCAGGCTTGGGAACTGTAAGCTCAAGCTTTTGCTCATTTGTCATTTACCCTGGTGGAGGCTTCTTGCCCAGATAGAGATCTGAAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 90 bp GCTTTCTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTaGTACATAAAGTTGATGTGGCCTTCATACATACACACATTCACT +
Preference number: 1 (lower is better)
Translates to: AFCSCLRARLGHQAL*YIKLMWPSYIHTFT
Trigger: AGTGAATGTGTGTATGTATGAAGGCCACATCAACTTTATGTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAGAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 90 bp GCTCAGCTTGGTAAGTACGACTACAACACACTACTACCCCAAGGGTaGGAGTGTGTGTTGATCTCGTGGCATGGAAAGAATTATTCTCAT +
Preference number: 1 (lower is better)
Translates to: AQLGKYDYNTLLPQG*ECVLISWHGKNYSH
Trigger: ATGAGAATAATTCTTTCCATGCCACGAGATCAACACACACTCCCACCCTTGGGGTAGTAGTGTGTTGTAGTCGTACTTACCAAGCTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR TCA 90 bp AGAGCGGGAACTGAAAAGCTAACAACATTCTTGGATGGTGTCCTCTaGCTCAGAACCCTGAGAGAAAAAGCTGGTATCTTCCCAGGTATA +
Preference number: 1 (lower is better)
Translates to: RAGTEKLTTFLDGVL*LRTLREKAGIFPGI
Trigger: TATACCTGGGAAGATACCAGCTTTTTCTCTCAGGGTTCTGAGTCAGAGGACACCATCCAAGAATGTTGTTAGCTTTTCAGTTCCCGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 90 bp TACTTAGCTTTTCCAAACATCTACTCTAAAGCAAGGTACGACCCCTaGTTGCTTCCCACCAATTTCAGATCTCTATCTGGGCAAGAAGCC +
Preference number: 1 (lower is better)
Translates to: YLAFPNIYSKARYDP*LLPTNFRSLSGQEA
Trigger: GGCTTCTTGCCCAGATAGAGATCTGAAATTGGTGGGAAGCAAGCAGGGGTCGTACCTTGCTTTAGAGTAGATGTTTGGAAAAGCTAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 90 bp GTAAGAGAAAACCAGGAAGTCCATCTAGGAGATGAAATTTGTGCTTaGATAACAGAGCCATGGAAATGGCTATCCCAGCATCTCCCCTCA +
Preference number: 1 (lower is better)
Translates to: VRENQEVHLGDEICA*ITEPWKWLSQHLPS
Trigger: TGAGGGGAGATGCTGGGATAGCCATTTCCATGGCTCTGTTATGCAAGCACAAATTTCATCTCCTAGATGGACTTCCTGGTTTTCTCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR TCA 90 bp CAGTGTTACTGCAGTAAGAGAAAACCAGGAAGTCCATCTAGGAGATaGAATTTGTGCTTGCATAACAGAGCCATGGAAATGGCTATCCCA +
Preference number: 1 (lower is better)
Translates to: QCYCSKRKPGSPSRR*NLCLHNRAMEMAIP
Trigger: TGGGATAGCCATTTCCATGGCTCTGTTATGCAAGCACAAATTTCATCTCCTAGATGGACTTCCTGGTTTTCTCTTACTGCAGTAACACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 90 bp GATCATACTCACGTGCAAAAAGCCAGACAACTTTCAACAGGGAACTaGCTGATTTCCTACTGGAATGGTTTCAATCTAATTTATCAACTC +
Preference number: 1 (lower is better)
Translates to: DHTHVQKARQLSTGN*LISYWNGFNLIYQL
Trigger: GAGTTGATAAATTAGATTGAAACCATTCCAGTAGGAAATCAGGCAGTTCCCTGTTGAAAGTTGTCTGGCTTTTTGCACGTGAGTATGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 90 bp CTCAGGAATATAATCACAATTAAGAAACCTCAGTTGATTGCTGATTaGCCTTTTCCCCAAATAAACACACAGACGCACAGACACACACAT +
Preference number: 1 (lower is better)
Translates to: LRNIITIKKPQLIAD*PFPQINTQTHRHTH
Trigger: ATGTGTGTGTCTGTGCGTCTGTGTGTTTATTTGGGGAAAAGGGCAATCAGCAATCAACTGAGGTTTCTTAATTGTGATTATATTCCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CCA 90 bp TGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCAGAGCTCCGCTCCAGGCTaGGCAACCCCAAAGGGCACG +
Preference number: 2 (lower is better)
Translates to: WRKAYIQRIGRAVSTGRQSSAPG*ATPKGT
Trigger: CGTGCCCTTTGGGGTTGCCCAGCCTGGAGCGGAGCT...CTGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
3UTR-3UTR CCA 90 bp CAGAGATGTACGGCCGAGGTGTGGGCAGATCCTGCTAGGACAGGTATGCCTTGCAGCTCCGCTCCAGGCTaGGCAACCCCAAAGGGCACG +
Preference number: 2 (lower is better)
Translates to: QRCTAEVWADPARTGMPCSSAPG*ATPKGT
Trigger: CGTGCCCTTTGGGGTTGCCCAGCCTGGAGCGGAGCT...GCAAGGCATACCTGTCCTAGCAGGATCTGCCCACACCTCGGCCGTACATCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CCA 90 bp CAGGATTCCCAGGCATGCCTAGCTGTGTGCAGTCAGGCTGGTGACCTGGACCCCTGCCATCTGACTCCTTaGCTGAGCGGACGACTGGGC +
Preference number: 2 (lower is better)
Translates to: QDSQACLAVCSQAGDLDPCHLTP*LSGRLG
Trigger: GCCCAGTCGTCCGCTCAGCCAAGGAGTCAGATGGCA...GGGGTCCAGGTCACCAGCCTGACTGCACACAGCTAGGCATGCCTGGGAATCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CAA 90 bp TCACTGTGCCCCTACCTGCTGGAGTACCCATTGCCATCTGACTCCTaGGCTGAGCGGACGACTGGGCCACAGCAGCCCTGCAGTGTGCTT +
Preference number: 2 (lower is better)
Translates to: SLCPYLLEYPLPSDS*AERTTGPQQPCSVL
Trigger: AAGCACACTGCAGGGCTGCTGTGGCCCAGTCGTCCGCTCAGCCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGCACAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR GCA 90 bp TGGGGAGGGCATGCAGAATGGGCCCCCAGGAGGCCAGAGATACTAGTTTCTTGGGGGCCACAGCAGCCCTaGAGTGTGCTTCCTCTCCCT +
Preference number: 2 (lower is better)
Translates to: WGGHAEWAPRRPEILVSWGPQQP*SVLPLP
Trigger: AGGGAGAGGAAGCACACTGCAGGGCTGCTGTGGCCC...CCAAGAAACTAGTATCTCTGGCCTCCTGGGGGCCCATTCTGCATGCCCTCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CAA 90 bp GGGCCACAGCAGCCCTGCAGTGTGCTTCCTCTCCCTCTATGCCTCTaGCGGCCTTCCCAGCTGAAGAGGTTGCTCAGCTTGGTAAGTACG +
Preference number: 2 (lower is better)
Translates to: GPQQPCSVLPLPLCL*RPSQLKRLLSLVST
Trigger: CGTACTTACCAAGCTGAGCAACCTCTTCAGCTGGGAAGGCCGCAAGAGGCATAGAGGGAGAGGAAGCACACTGCAGGGCTGCTGTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR TCA 90 bp CAGAGATGTACGGCCGAGGTGTGGGCAGATCCTGCTAGGACAGGTATGCCTTGCCCACCAAGACAGCCCTaGGAGCTGGGTTCCTACTGC +
Preference number: 2 (lower is better)
Translates to: QRCTAEVWADPARTGMPCPPRQP*ELGSYC
Trigger: GCAGTAGGAACCCAGCTCTCAGGGCTGTCTTGGTGG...GCAAGGCATACCTGTCCTAGCAGGATCTGCCCACACCTCGGCCGTACATCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CCA 90 bp GGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCAGCTCCGCTCCAGGCTaGGCAACCCCAAAGGGCACG +
Preference number: 2 (lower is better)
Translates to: GQSFIWRKAYIQRIGRAVSSAPG*ATPKGT
Trigger: CGTGCCCTTTGGGGTTGCCCAGCCTGGAGCGGAGCT...GACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
3UTR-3UTR CCA 90 bp CTGAGCGGACGACTGGGCCACAGCAGCCCTGCAGTGTGCTTCCTCTCCCTCTATCTACTACCCCAAGGGTaGGAGTGTGTGTTGATCTCG +
Preference number: 2 (lower is better)
Translates to: LSGRLGHSSPAVCFLSLYLLPQG*ECVLIS
Trigger: CGAGATCAACACACACTCCCACCCTTGGGGTAGTAG...ATAGAGGGAGAGGAAGCACACTGCAGGGCTGCTGTGGCCCAGTCGTCCGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR TCA 90 bp TGGGGAGGGCATGCAGAATGGGCCCCCAGGAGGCCAGAGATACTAGTTTCTTGGCTCCCAGAACAACCCTaGTCCAGGGACCCTGTTCAT +
Preference number: 2 (lower is better)
Translates to: WGGHAEWAPRRPEILVSWLPEQP*SRDPVH
Trigger: ATGAACAGGGTCCCTGGATCAGGGTTGTTCTGGGAG...CCAAGAAACTAGTATCTCTGGCCTCCTGGGGGCCCATTCTGCATGCCCTCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR GCA 90 bp TTACAGTTCCCAAGCCTGCAGGGTGGATGGTGCCATCCAAGGAGAAATAGCGGTGGGCCACAGCAGCCCTaGAGTGTGCTTCCTCTCCCT +
Preference number: 2 (lower is better)
Translates to: LQFPSLQGGWCHPRRNSGGPQQP*SVLPLP
Trigger: AGGGAGAGGAAGCACACTGCAGGGCTGCTGTGGCCC...ACCGCTATTTCTCCTTGGATGGCACCATCCACCCTGCAGGCTTGGGAACTGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR GCA 90 bp TGGGGAGGGCATGCAGAATGGGCCCCCAGGAGGCCAGAGATACTAGTTTCTTGGCACTGTGCCCCTACCTaGTGGAGTACCCATTGCCAT +
Preference number: 2 (lower is better)
Translates to: WGGHAEWAPRRPEILVSWHCAPT*WSTHCH
Trigger: ATGGCAATGGGTACTCCAGCAGGTAGGGGCACAGTG...CCAAGAAACTAGTATCTCTGGCCTCCTGGGGGCCCATTCTGCATGCCCTCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CCA 90 bp CAGAGATGTACGGCCGAGGTGTGGGCAGATCCTGCTAGGACAGGTATGCCTTGCTGTGCCCCTACCTGCTaGAGTACCCATTGCCATCTG +
Preference number: 2 (lower is better)
Translates to: QRCTAEVWADPARTGMPCCAPTC*STHCHL
Trigger: CAGATGGCAATGGGTACTCCAGCAGGTAGGGGCACA...GCAAGGCATACCTGTCCTAGCAGGATCTGCCCACACCTCGGCCGTACATCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR TCA 90 bp CAGAGATGTACGGCCGAGGTGTGGGCAGATCCTGCTAGGACAGGTATGCCTTGCGGTGGGAGTGTGTGTTaGTCTCGTGGCATGGAAAGA +
Preference number: 2 (lower is better)
Translates to: QRCTAEVWADPARTGMPCGGSVC*SRGMER
Trigger: TCTTTCCATGCCACGAGATCAACACACACTCCCACC...GCAAGGCATACCTGTCCTAGCAGGATCTGCCCACACCTCGGCCGTACATCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR GCA 90 bp CAGGATTCCCAGGCATGCCTAGCTGTGTGCAGTCAGGCTGGTGACCTGGACCCCGGCCACCAAGCCCTTTaGTACATAAAGTTGATGTGG +
Preference number: 2 (lower is better)
Translates to: QDSQACLAVCSQAGDLDPGHQAL*YIKLMW
Trigger: CCACATCAACTTTATGTAGCAAAGGGCTTGGTGGCC...GGGGTCCAGGTCACCAGCCTGACTGCACACAGCTAGGCATGCCTGGGAATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR GCA 90 bp GACGCACAGACACACACATACACAGACGGACACAGAGCACCTTGGAGCCAGAAGGTTTCCTGGGGGTTGTaGTGGGCTGCTCAGCAGAGA +
Preference number: 2 (lower is better)
Translates to: DAQTHTYTDGHRAPWSQKVSWGL*WAAQQR
Trigger: TCTCTGCTGAGCAGCCCAGCACAACCCCCAGGAAAC...CTTCTGGCTCCAAGGTGCTCTGTGTCCGTCTGTGTATGTGTGTGTCTGTGCGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR TCA 90 bp TGGGGAGGGCATGCAGAATGGGCCCCCAGGAGGCCAGAGATACTAGTTTCTTGGTCTCTCAGGCTTGAGTaGGGCCTTCTGAAGTTGAAG +
Preference number: 2 (lower is better)
Translates to: WGGHAEWAPRRPEILVSWSLRLE*GLLKLK
Trigger: CTTCAACTTCAGAAGGCCTCACTCAAGCCTGAGAGA...CCAAGAAACTAGTATCTCTGGCCTCCTGGGGGCCCATTCTGCATGCCCTCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR TCA 90 bp AGAACCTTTATGCACTCTCTCCCACCTAGACCGAGAAGTGTGCAGCAGCCGTACGTGCAGTCAGGCTGGTaGCCTGGACCCCATTTGTGT +
Preference number: 2 (lower is better)
Translates to: RTFMHSLPPRPRSVQQPYVQSGW*PGPHLC
Trigger: ACACAAATGGGGTCCAGGTCACCAGCCTGACTGCAC...GTACGGCTGCTGCACACTTCTCGGTCTAGGTGGGAGAGAGTGCATAAAGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR GCA 90 bp GGGGAAGTGAACTTCACCACTCTGCAGAATTGTTCTGGGGCAGAGGGTGTAGAGAGCAGCCCTGCAGTGTaGTTCCTCTCCCTCTATGCC +
Preference number: 2 (lower is better)
Translates to: GEVNFTTLQNCSGAEGVESSPAV*FLSLYA
Trigger: GGCATAGAGGGAGAGGAAGCACACTGCAGGGCTGCT...CTCTACACCCTCTGCCCCAGAACAATTCTGCAGAGTGGTGAAGTTCACTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CCA 90 bp TGGGGAGGGCATGCAGAATGGGCCCCCAGGAGGCCAGAGATACTAGTTTCTTGGTCAAGGAGCATGCCATaGCTTGGGAATGGTTCTCTG +
Preference number: 2 (lower is better)
Translates to: WGGHAEWAPRRPEILVSWSRSMP*LGNGSL
Trigger: CAGAGAACCATTCCCAAGCCATGGCATGCTCCTTGA...CCAAGAAACTAGTATCTCTGGCCTCCTGGGGGCCCATTCTGCATGCCCTCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CAA 90 bp CCTCTATGCCTCTTGCGGCCTTCCCAGCTGAAGAGGTTGCTCAGCTaGGTAAGTACGACTACAACACACTACTACCCCAAGGGTGGGAGT +
Preference number: 2 (lower is better)
Translates to: PLCLLRPSQLKRLLS*VSTTTTHYYPKGGS
Trigger: ACTCCCACCCTTGGGGTAGTAGTGTGTTGTAGTCGTACTTACCAAGCTGAGCAACCTCTTCAGCTGGGAAGGCCGCAAGAGGCATAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR GCA 90 bp TGGGGAGGGCATGCAGAATGGGCCCCCAGGAGGCCAGAGATACTAGTTTCTTGGCCTGGAGAAATCAAATaGGCTAGAAACCTAGCCACC +
Preference number: 2 (lower is better)
Translates to: WGGHAEWAPRRPEILVSWPGEIK*ARNLAT
Trigger: GGTGGCTAGGTTTCTAGCGCATTTGATTTCTCCAGG...CCAAGAAACTAGTATCTCTGGCCTCCTGGGGGCCCATTCTGCATGCCCTCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR GCA 90 bp AAGCAAGGTACGACCCCTGCTTGCTTCCCACCAATTTCAGATCTCTATCTGGGCGCATGCCTAGCTGTGTaGAGTCAGGCTGGTGACCTG +
Preference number: 2 (lower is better)
Translates to: KQGTTPACFPPISDLYLGACLAV*SQAGDL
Trigger: CAGGTCACCAGCCTGACTGCACACAGCTAGGCATGC...GCCCAGATAGAGATCTGAAATTGGTGGGAAGCAAGCAGGGGTCGTACCTTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR GCA 90 bp TTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAGAGAAGGGAAGGCCAGTGCTAGACCGAGAAGTGTaGAGCAGCCGTACTAAGGCC +
Preference number: 2 (lower is better)
Translates to: LTQGCRSWGKELEKGRPVLDREV*SSRTKA
Trigger: GGCCTTAGTACGGCTGCTGCACACTTCTCGGTCTAG...CACTGGCCTTCCCTTCTCTAATTCCTTACCCCAGCTGCGGCATCCCTGTGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CCA 90 bp CATACACAGTCTAGGCATTGTGAAAACTGGCTGTGTTCCCAGCAAGAGATACTGCAGTTCCTGGCTGGCTaGGCCAGGGAGCCCACTGAG +
Preference number: 2 (lower is better)
Translates to: HTQSRHCENWLCSQQEILQFLAG*AREPTE
Trigger: CTCAGTGGGCTCCCTGGCCCAGCCAGCCAGGAACTG...CAGTATCTCTTGCTGGGAACACAGCCAGTTTTCACAATGCCTAGACTGTGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CCA 90 bp AGGGCTTTCTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACCTACTACCCCAAGGGTaGGAGTGTGTGTTGATCTCG +
Preference number: 2 (lower is better)
Translates to: RAFCSCLRARLGHQALCYLLPQG*ECVLIS
Trigger: CGAGATCAACACACACTCCCACCCTTGGGGTAGTAG...GTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAGAAAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CCA 90 bp GACGCACAGACACACACATACACAGACGGACACAGAGCACCTTGGAGCCAGAAGTTTAAGGGCCAGGCTTaGCCACCAAGCCCTTTGCTA +
Preference number: 2 (lower is better)
Translates to: DAQTHTYTDGHRAPWSQKFKGQA*PPSPLL
Trigger: TAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAA...CTTCTGGCTCCAAGGTGCTCTGTGTCCGTCTGTGTATGTGTGTGTCTGTGCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CCA 90 bp GACGCACAGACACACACATACACAGACGGACACAGAGCACCTTGGAGCCAGAAGGTCAGGCTGGTGACCTaGACCCCATTTGTGTTTCCT +
Preference number: 2 (lower is better)
Translates to: DAQTHTYTDGHRAPWSQKVRLVT*TPFVFP
Trigger: AGGAAACACAAATGGGGTCCAGGTCACCAGCCTGAC...CTTCTGGCTCCAAGGTGCTCTGTGTCCGTCTGTGTATGTGTGTGTCTGTGCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CCA 90 bp TTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAGAGAAGGGAAGGCCAGTGGAGCATGCCATGGCTTaGGAATGGTTCTCTGGCAGC +
Preference number: 2 (lower is better)
Translates to: LTQGCRSWGKELEKGRPVEHAMA*EWFSGS
Trigger: GCTGCCAGAGAACCATTCCCAAGCCATGGCATGCTC...CACTGGCCTTCCCTTCTCTAATTCCTTACCCCAGCTGCGGCATCCCTGTGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CCA 90 bp CATACACAGTCTAGGCATTGTGAAAACTGGCTGTGTTCCCAGCAAGAGATACTGGGAGGGCATGCAGAATaGGCCCCCAGGAGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: HTQSRHCENWLCSQQEILGGHAE*APRRPE
Trigger: CTCTGGCCTCCTGGGGGCCCATTCTGCATGCCCTCC...CAGTATCTCTTGCTGGGAACACAGCCAGTTTTCACAATGCCTAGACTGTGTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CAA 90 bp CCTCCTGACCGAGCAGTCAGGCTTCCCTTTCCTAGCCATCCTAAGTaGCGTTCTAGGAAACTCTGGATCTCAGCCTCATCTCCAGCTTTG +
Preference number: 2 (lower is better)
Translates to: PPDRAVRLPFPSHPK*RSRKLWISASSPAL
Trigger: CAAAGCTGGAGATGAGGCTGAGATCCAGAGTTTCCTAGAACGCAACTTAGGATGGCTAGGAAAGGGAAGCCTGACTGCTCGGTCAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR TCA 90 bp AGAACCTTTATGCACTCTCTCCCACCTAGACCGAGAAGTGTGCAGCAGCCGTACTTCCTACTGCCTCTGTaGGACACAGCAAACCTGGAG +
Preference number: 2 (lower is better)
Translates to: RTFMHSLPPRPRSVQQPYFLLPL*DTANLE
Trigger: CTCCAGGTTTGCTGTGTCTCACAGAGGCAGTAGGAA...GTACGGCTGCTGCACACTTCTCGGTCTAGGTGGGAGAGAGTGCATAAAGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR TCA 90 bp TTACAGTTCCCAAGCCTGCAGGGTGGATGGTGCCATCCAAGGAGAAATAGCGGTATGCTTCTAAGTCTCTaGATCGGGGGAAGTGGGGAG +
Preference number: 2 (lower is better)
Translates to: LQFPSLQGGWCHPRRNSGMLLSL*IGGSGE
Trigger: CTCCCCACTTCCCCCGATTCAGAGACTTAGAAGCAT...ACCGCTATTTCTCCTTGGATGGCACCATCCACCCTGCAGGCTTGGGAACTGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR TCA 90 bp GACGCACAGACACACACATACACAGACGGACACAGAGCACCTTGGAGCCAGAAGGAAGAGTTGGGGAAGTaGACTTCACCACTCTGCAGA +
Preference number: 2 (lower is better)
Translates to: DAQTHTYTDGHRAPWSQKEELGK*TSPLCR
Trigger: TCTGCAGAGTGGTGAAGTTCACTTCCCCAACTCTTC...CTTCTGGCTCCAAGGTGCTCTGTGTCCGTCTGTGTATGTGTGTGTCTGTGCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR GCA 90 bp TTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAGAGAAGGGAAGGCCAGTGCTGCAGGGTGGATGGTaGCATCCAAGGAGAAATAGC +
Preference number: 2 (lower is better)
Translates to: LTQGCRSWGKELEKGRPVLQGGW*HPRRNS
Trigger: GCTATTTCTCCTTGGATGGCACCATCCACCCTGCAG...CACTGGCCTTCCCTTCTCTAATTCCTTACCCCAGCTGCGGCATCCCTGTGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CCA 90 bp AGGGCTTTCTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACGGCCAAAGCTTCATCTaGCGGAAGGCCTATATACAG +
Preference number: 2 (lower is better)
Translates to: RAFCSCLRARLGHQALCYGQSFI*RKAYIQ
Trigger: CTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCC...GTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAGAAAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR TCA 90 bp TTACAGTTCCCAAGCCTGCAGGGTGGATGGTGCCATCCAAGGAGAAATAGCGGTTCTCTCAGGCTTGAGTaGGGCCTTCTGAAGTTGAAG +
Preference number: 2 (lower is better)
Translates to: LQFPSLQGGWCHPRRNSGSLRLE*GLLKLK
Trigger: CTTCAACTTCAGAAGGCCTCACTCAAGCCTGAGAGA...ACCGCTATTTCTCCTTGGATGGCACCATCCACCCTGCAGGCTTGGGAACTGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR GCA 90 bp GAAATTTGTGCTTGCATAACAGAGCCATGGAAATGGCTATCCCAGCATCTCCCCAGCAGCCCTGCAGTGTaGTTCCTCTCCCTCTATGCC +
Preference number: 2 (lower is better)
Translates to: EICACITEPWKWLSQHLPSSPAV*FLSLYA
Trigger: GGCATAGAGGGAGAGGAAGCACACTGCAGGGCTGCT...GGGGAGATGCTGGGATAGCCATTTCCATGGCTCTGTTATGCAAGCACAAATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CCA 90 bp GGGGAAGTGAACTTCACCACTCTGCAGAATTGTTCTGGGGCAGAGGGTGTAGAGCCTGACAGAGTTTTGTaGCTGAGGCTATCCTTCTCC +
Preference number: 2 (lower is better)
Translates to: GEVNFTTLQNCSGAEGVEPDRVL*LRLSFS
Trigger: GGAGAAGGATAGCCTCAGCCACAAAACTCTGTCAGG...CTCTACACCCTCTGCCCCAGAACAATTCTGCAGAGTGGTGAAGTTCACTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CCA 90 bp GACGCACAGACACACACATACACAGACGGACACAGAGCACCTTGGAGCCAGAAGCAAGAACTCTTATTGTaGGAGAGGCTGAACCCAGGT +
Preference number: 2 (lower is better)
Translates to: DAQTHTYTDGHRAPWSQKQELLL*ERLNPG
Trigger: ACCTGGGTTCAGCCTCTCCCACAATAAGAGTTCTTG...CTTCTGGCTCCAAGGTGCTCTGTGTCCGTCTGTGTATGTGTGTGTCTGTGCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CAA 90 bp CAGCGCTGGCACAAAGTTCTAGTGCCCTCTAGAAACTGGACCATGTaGCAAAAGCTAATCGTTGGAGGGGGTCTCTCACAGAGATGTACG +
Preference number: 2 (lower is better)
Translates to: QRWHKVLVPSRNWTM*QKLIVGGGLSQRCT
Trigger: CGTACATCTCTGTGAGAGACCCCCTCCAACGATTAGCTTTTGCAACATGGTCCAGTTTCTAGAGGGCACTAGAACTTTGTGCCAGCGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR GCA 90 bp GGGGAAGTGAACTTCACCACTCTGCAGAATTGTTCTGGGGCAGAGGGTGTAGAGCTGTTCATGCACTTCTaGATGCTGAGCCTGTGTCTT +
Preference number: 2 (lower is better)
Translates to: GEVNFTTLQNCSGAEGVELFMHF*MLSLCL
Trigger: AAGACACAGGCTCAGCATGCAGAAGTGCATGAACAG...CTCTACACCCTCTGCCCCAGAACAATTCTGCAGAGTGGTGAAGTTCACTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR GCA 90 bp CATACACAGTCTAGGCATTGTGAAAACTGGCTGTGTTCCCAGCAAGAGATACTGGTTTCCTGGGGGTTGTaGTGGGCTGCTCAGCAGAGA +
Preference number: 2 (lower is better)
Translates to: HTQSRHCENWLCSQQEILVSWGL*WAAQQR
Trigger: TCTCTGCTGAGCAGCCCAGCACAACCCCCAGGAAAC...CAGTATCTCTTGCTGGGAACACAGCCAGTTTTCACAATGCCTAGACTGTGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR GCA 90 bp GTTACAGAGAAGCTGCCTAAACTCACTCCCAACTGCCCAATACCATTAGGGACTTCTCCACTACTCCCCTaGCTCAGTAGCAGAGGCAAA +
Preference number: 2 (lower is better)
Translates to: VTEKLPKLTPNCPIPLGTSPLLP*LSSRGK
Trigger: TTTGCCTCTGCTACTGAGGCAGGGGAGTAGTGGAGA...AGTCCCTAATGGTATTGGGCAGTTGGGAGTGAGTTTAGGCAGCTTCTCTGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR GCA 90 bp CATACACAGTCTAGGCATTGTGAAAACTGGCTGTGTTCCCAGCAAGAGATACTGTACAGTTCCCAAGCCTaGAGGGTGGATGGTGCCATC +
Preference number: 2 (lower is better)
Translates to: HTQSRHCENWLCSQQEILYSSQA*RVDGAI
Trigger: GATGGCACCATCCACCCTGCAGGCTTGGGAACTGTA...CAGTATCTCTTGCTGGGAACACAGCCAGTTTTCACAATGCCTAGACTGTGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CCA 90 bp GTTACAGAGAAGCTGCCTAAACTCACTCCCAACTGCCCAATACCATTAGGGACTTTTAAGGGCCAGGCTTaGCCACCAAGCCCTTTGCTA +
Preference number: 2 (lower is better)
Translates to: VTEKLPKLTPNCPIPLGTFKGQA*PPSPLL
Trigger: TAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAA...AGTCCCTAATGGTATTGGGCAGTTGGGAGTGAGTTTAGGCAGCTTCTCTGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CAA 90 bp TGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACATAAAGTaGATGTGGCCTTCATACATACACACATTCACTGTGCCCCTACCT +
Preference number: 2 (lower is better)
Translates to: CLRARLGHQALCYIK*MWPSYIHTFTVPLP
Trigger: AGGTAGGGGCACAGTGAATGTGTGTATGTATGAAGGCCACATCAACTTTATGTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CCA 90 bp GAAATTTGTGCTTGCATAACAGAGCCATGGAAATGGCTATCCCAGCATCTCCCCGCAAAAGCTAATCGTTaGAGGGGGTCTCTCACAGAG +
Preference number: 2 (lower is better)
Translates to: EICACITEPWKWLSQHLPAKANR*RGSLTE
Trigger: CTCTGTGAGAGACCCCCTCCAACGATTAGCTTTTGC...GGGGAGATGCTGGGATAGCCATTTCCATGGCTCTGTTATGCAAGCACAAATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CAA 90 bp GGCTTTCTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTaGCTACATAAAGTTGATGTGGCCTTCATACATACACACATTCAC +
Preference number: 2 (lower is better)
Translates to: GFLQLFKGQAWPPSP*LHKVDVAFIHTHIH
Trigger: GTGAATGTGTGTATGTATGAAGGCCACATCAACTTTATGTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAGAAAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CAA 90 bp GTGCACTCAGCTACTGATGCTTGTCATTCAATGCCTGACAGAGTTTaGTGGCTGAGGCTATCCTTCTCCACACTTAGGCTAGAAAGCTCA +
Preference number: 2 (lower is better)
Translates to: VHSATDACHSMPDRV*WLRLSFSTLRLESS
Trigger: TGAGCTTTCTAGCCTAAGTGTGGAGAAGGATAGCCTCAGCCACAAAACTCTGTCAGGCATTGAATGACAAGCATCAGTAGCTGAGTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR TCA 90 bp TTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAGAGAAGGGAAGGCCAGTGTCCAGAGAAATAGCTTaGCCTAACATTAGAGACGAT +
Preference number: 2 (lower is better)
Translates to: LTQGCRSWGKELEKGRPVSREIA*PNIRDD
Trigger: ATCGTCTCTAATGTTAGGTCAAGCTATTTCTCTGGA...CACTGGCCTTCCCTTCTCTAATTCCTTACCCCAGCTGCGGCATCCCTGTGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR GCA 90 bp CATACACAGTCTAGGCATTGTGAAAACTGGCTGTGTTCCCAGCAAGAGATACTGTACACACATTCACTGTaGCCCTACCTGCTGGAGTAC +
Preference number: 2 (lower is better)
Translates to: HTQSRHCENWLCSQQEILYTHSL*PYLLEY
Trigger: GTACTCCAGCAGGTAGGGGCACAGTGAATGTGTGTA...CAGTATCTCTTGCTGGGAACACAGCCAGTTTTCACAATGCCTAGACTGTGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CCA 90 bp GACGCACAGACACACACATACACAGACGGACACAGAGCACCTTGGAGCCAGAAGTGTGTGTTGATCTCGTaGCATGGAAAGAATTATTCT +
Preference number: 2 (lower is better)
Translates to: DAQTHTYTDGHRAPWSQKCVLIS*HGKNYS
Trigger: AGAATAATTCTTTCCATGCCACGAGATCAACACACA...CTTCTGGCTCCAAGGTGCTCTGTGTCCGTCTGTGTATGTGTGTGTCTGTGCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CAA 90 bp TTAGCTTTTCCAAACATCTACTCTAAAGCAAGGTACGACCCCTGCTaGCTTCCCACCAATTTCAGATCTCTATCTGGGCAAGAAGCCTCC +
Preference number: 2 (lower is better)
Translates to: LAFPNIYSKARYDPC*LPTNFRSLSGQEAS
Trigger: GGAGGCTTCTTGCCCAGATAGAGATCTGAAATTGGTGGGAAGCAAGCAGGGGTCGTACCTTGCTTTAGAGTAGATGTTTGGAAAAGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR TCA 90 bp GAAATTTGTGCTTGCATAACAGAGCCATGGAAATGGCTATCCCAGCATCTCCCCCTCCACCAGGGTAAATaGCAAATGAGCAAAAGCTTG +
Preference number: 2 (lower is better)
Translates to: EICACITEPWKWLSQHLPLHQGK*QMSKSL
Trigger: CAAGCTTTTGCTCATTTGTCATTTACCCTGGTGGAG...GGGGAGATGCTGGGATAGCCATTTCCATGGCTCTGTTATGCAAGCACAAATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CCA 90 bp GACGCACAGACACACACATACACAGACGGACACAGAGCACCTTGGAGCCAGAAGTACATAAAGTTGATGTaGCCTTCATACATACACACA +
Preference number: 2 (lower is better)
Translates to: DAQTHTYTDGHRAPWSQKYIKLM*PSYIHT
Trigger: TGTGTGTATGTATGAAGGCCACATCAACTTTATGTA...CTTCTGGCTCCAAGGTGCTCTGTGTCCGTCTGTGTATGTGTGTGTCTGTGCGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CCA 90 bp GAAATTTGTGCTTGCATAACAGAGCCATGGAAATGGCTATCCCAGCATCTCCCCCCTGAGAGAAAAAGCTaGTATCTTCCCAGGTATACC +
Preference number: 2 (lower is better)
Translates to: EICACITEPWKWLSQHLPPERKS*YLPRYT
Trigger: GGTATACCTGGGAAGATACCAGCTTTTTCTCTCAGG...GGGGAGATGCTGGGATAGCCATTTCCATGGCTCTGTTATGCAAGCACAAATTTC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR TCA 90 bp GAAATTTGTGCTTGCATAACAGAGCCATGGAAATGGCTATCCCAGCATCTCCCCATGCAGAGCGGGAACTaGAAAGCTAACAACATTCTT +
Preference number: 2 (lower is better)
Translates to: EICACITEPWKWLSQHLPMQSGN*KANNIL
Trigger: AAGAATGTTGTTAGCTTTTCAGTTCCCGCTCTGCAT...GGGGAGATGCTGGGATAGCCATTTCCATGGCTCTGTTATGCAAGCACAAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CCA 90 bp GTTACAGAGAAGCTGCCTAAACTCACTCCCAACTGCCCAATACCATTAGGGACTTTTCTTGGGGGACAGTaGGAACAAAGAAATCAAGAG +
Preference number: 2 (lower is better)
Translates to: VTEKLPKLTPNCPIPLGTFLGGQ*EQRNQE
Trigger: CTCTTGATTTCTTTGTTCCCACTGTCCCCCAAGAAA...AGTCCCTAATGGTATTGGGCAGTTGGGAGTGAGTTTAGGCAGCTTCTCTGTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR GCA 90 bp GTTACAGAGAAGCTGCCTAAACTCACTCCCAACTGCCCAATACCATTAGGGACTTGGATCATACTCACGTaGAAAAAGCCAGACAACTTT +
Preference number: 2 (lower is better)
Translates to: VTEKLPKLTPNCPIPLGTWIILT*KKPDNF
Trigger: AAAGTTGTCTGGCTTTTTGCACGTGAGTATGATCCA...AGTCCCTAATGGTATTGGGCAGTTGGGAGTGAGTTTAGGCAGCTTCTCTGTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR GCA 90 bp CATACACAGTCTAGGCATTGTGAAAACTGGCTGTGTTCCCAGCAAGAGATACTGCTGCTAGGACAGGTATaGCTTGCTTTAAGCATTCAA +
Preference number: 2 (lower is better)
Translates to: HTQSRHCENWLCSQQEILLLGQV*LALSIQ
Trigger: TTGAATGCTTAAAGCAAGGCATACCTGTCCTAGCAG...CAGTATCTCTTGCTGGGAACACAGCCAGTTTTCACAATGCCTAGACTGTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CCA 90 bp CATACACAGTCTAGGCATTGTGAAAACTGGCTGTGTTCCCAGCAAGAGATACTGAGGGAAGGGCTAAACTaGAACTATAGAAAGGAGGAT +
Preference number: 2 (lower is better)
Translates to: HTQSRHCENWLCSQQEILREGLN*NYRKED
Trigger: ATCCTCCTTTCTATAGTTCCAGTTTAGCCCTTCCCT...CAGTATCTCTTGCTGGGAACACAGCCAGTTTTCACAATGCCTAGACTGTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR TCA 90 bp GAAATTTGTGCTTGCATAACAGAGCCATGGAAATGGCTATCCCAGCATCTCCCCTCTCAAATGTCACCATaGAGATCTCTTCTCCTTAAA +
Preference number: 2 (lower is better)
Translates to: EICACITEPWKWLSQHLPSQMSP*RSLLLK
Trigger: TTTAAGGAGAAGAGATCTTCATGGTGACATTTGAGA...GGGGAGATGCTGGGATAGCCATTTCCATGGCTCTGTTATGCAAGCACAAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR TCA 90 bp ATGAGAGCATATTACTTCTACTTAAGTCAAAACAAGTCCTTCACCTATAAAGCCTTCCTACTGCCTCTGTaGGACACAGCAAACCTGGAG +
Preference number: 2 (lower is better)
Translates to: MRAYYFYLSQNKSFTYKAFLLPL*DTANLE
Trigger: CTCCAGGTTTGCTGTGTCTCACAGAGGCAGTAGGAA...GGCTTTATAGGTGAAGGACTTGTTTTGACTTAAGTAGAAGTAATATGCTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CCA 90 bp GTTACAGAGAAGCTGCCTAAACTCACTCCCAACTGCCCAATACCATTAGGGACTTGCCTGATTTCCTACTaGAATGGTTTCAATCTAATT +
Preference number: 2 (lower is better)
Translates to: VTEKLPKLTPNCPIPLGTCLISY*NGFNLI
Trigger: AATTAGATTGAAACCATTCCAGTAGGAAATCAGGCA...AGTCCCTAATGGTATTGGGCAGTTGGGAGTGAGTTTAGGCAGCTTCTCTGTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR GCA 90 bp ATGAGAGCATATTACTTCTACTTAAGTCAAAACAAGTCCTTCACCTATAAAGCCTACACACATTCACTGTaGCCCTACCTGCTGGAGTAC +
Preference number: 2 (lower is better)
Translates to: MRAYYFYLSQNKSFTYKAYTHSL*PYLLEY
Trigger: GTACTCCAGCAGGTAGGGGCACAGTGAATGTGTGTA...GGCTTTATAGGTGAAGGACTTGTTTTGACTTAAGTAGAAGTAATATGCTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR TCA 90 bp ATGAGAGCATATTACTTCTACTTAAGTCAAAACAAGTCCTTCACCTATAAAGCCGAGAACTTGAAGTTCTaGATGCTGCCATTAACCAGC +
Preference number: 2 (lower is better)
Translates to: MRAYYFYLSQNKSFTYKAENLKF*MLPLTS
Trigger: GCTGGTTAATGGCAGCATTCAGAACTTCAAGTTCTC...GGCTTTATAGGTGAAGGACTTGTTTTGACTTAAGTAGAAGTAATATGCTCTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CCA 90 bp ATGAGAGCATATTACTTCTACTTAAGTCAAAACAAGTCCTTCACCTATAAAGCCTTACCAACCATGACTTaGCTGACAGCAGTGAGAAAG +
Preference number: 2 (lower is better)
Translates to: MRAYYFYLSQNKSFTYKALPTMT*LTAVRK
Trigger: CTTTCTCACTGCTGTCAGCCAAGTCATGGTTGGTAA...GGCTTTATAGGTGAAGGACTTGTTTTGACTTAAGTAGAAGTAATATGCTCTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CCA 90 bp ATGAGAGCATATTACTTCTACTTAAGTCAAAACAAGTCCTTCACCTATAAAGCCTGTGTGTTGATCTCGTaGCATGGAAAGAATTATTCT +
Preference number: 2 (lower is better)
Translates to: MRAYYFYLSQNKSFTYKACVLIS*HGKNYS
Trigger: AGAATAATTCTTTCCATGCCACGAGATCAACACACA...GGCTTTATAGGTGAAGGACTTGTTTTGACTTAAGTAGAAGTAATATGCTCTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 72 bp CTGAGCGGACGACTGGGCCACAGCAGCCCTGCAGTGTaGTTCCTCTCCCTCTATGCCTCTTGCGGCCTTCCC +
Preference number: 3 (lower is better)
Translates to: LSGRLGHSSPAV*FLSLYASCGLP
Trigger: GGGAAGGCCGCAAGAGGCATAGAGGGAGAGGAAGCACACTGCAGGGCTGCTGTGGCCCAGTCGTCCGCTCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 72 bp TCCTTGGCTGAGCGGACGACTGGGCCACAGCAGCCCTaGAGTGTGCTTCCTCTCCCTCTATGCCTCTTGCGG +
Preference number: 3 (lower is better)
Translates to: SLAERTTGPQQP*SVLPLPLCLLR
Trigger: CCGCAAGAGGCATAGAGGGAGAGGAAGCACACTGCAGGGCTGCTGTGGCCCAGTCGTCCGCTCAGCCAAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR TCA 72 bp AAGTGTGCAGCAGCCGTACTAAGGCCTGCTTACTGCTaGGTAGCCCTCGCGGAGGGGCCAGACACAGGCCAA +
Preference number: 3 (lower is better)
Translates to: KCAAAVLRPAYC*VALAEGPDTGQ
Trigger: TTGGCCTGTGTCTGGCCCCTCCGCGAGGGCTACTCAGCAGTAAGCAGGCCTTAGTACGGCTGCTGCACACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 72 bp CCACAGCAGCCCTGCAGTGTGCTTCCTCTCCCTCTATaGCTCTTGCGGCCTTCCCAGCTGAAGAGGTTGCTC +
Preference number: 3 (lower is better)
Translates to: PQQPCSVLPLPL*LLRPSQLKRLL
Trigger: GAGCAACCTCTTCAGCTGGGAAGGCCGCAAGAGGCATAGAGGGAGAGGAAGCACACTGCAGGGCTGCTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 72 bp CTAGACCGAGAAGTGTGCAGCAGCCGTACTAAGGCCTaGTTACTGCTGAGTAGCCCTCGCGGAGGGGCCAGA +
Preference number: 3 (lower is better)
Translates to: LDREVCSSRTKA*LLLSSPRGGAR
Trigger: TCTGGCCCCTCCGCGAGGGCTACTCAGCAGTAAGCAGGCCTTAGTACGGCTGCTGCACACTTCTCGGTCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 72 bp CACATTCACTGTGCCCCTACCTGCTGGAGTACCCATTaGCATCTGACTCCTTGGCTGAGCGGACGACTGGGC +
Preference number: 3 (lower is better)
Translates to: HIHCAPTCWSTH*HLTPWLSGRLG
Trigger: GCCCAGTCGTCCGCTCAGCCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGCACAGTGAATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 72 bp CCAGCTGATTCCCATAGCCACAGCAAGCCAGGCACCTaGAATCCTGACAGGGTCCTGCCACTTACCTGTCCC +
Preference number: 3 (lower is better)
Translates to: PADSHSHSKPGT*NPDRVLPLTCP
Trigger: GGGACAGGTAAGTGGCAGGACCCTGTCAGGATTGCAGGTGCCTGGCTTGCTGTGGCTATGGGAATCAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 72 bp TGGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTaGCGGAAGGCCTATATACAGAGGATAGGCAGGGCT +
Preference number: 3 (lower is better)
Translates to: WAREPTEGQSFI*RKAYIQRIGRA
Trigger: AGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
3UTR CCA 72 bp AGTCAGGCTGGTGACCTGGACCCCATTTGTGTTTCCTaGGGGTTGTGCTGGGCTGCTCAGCAGAGAGCTCCT +
Preference number: 3 (lower is better)
Translates to: SQAGDLDPICVS*GLCWAAQQRAP
Trigger: AGGAGCTCTCTGCTGAGCAGCCCAGCACAACCCCCAGGAAACACAAATGGGGTCCAGGTCACCAGCCTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR TCA 72 bp TTCCCAGGCATGCCTAGCTGTGTGCAGTCAGGCTGGTaGCCTGGACCCCATTTGTGTTTCCTGGGGGTTGTG +
Preference number: 3 (lower is better)
Translates to: FPGMPSCVQSGW*PGPHLCFLGVV
Trigger: CACAACCCCCAGGAAACACAAATGGGGTCCAGGTCACCAGCCTGACTGCACACAGCTAGGCATGCCTGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 72 bp CTCTGGCAGCAGGATTCCCAGGCATGCCTAGCTGTGTaGAGTCAGGCTGGTGACCTGGACCCCATTTGTGTT +
Preference number: 3 (lower is better)
Translates to: LWQQDSQACLAV*SQAGDLDPICV
Trigger: AACACAAATGGGGTCCAGGTCACCAGCCTGACTGCACACAGCTAGGCATGCCTGGGAATCCTGCTGCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 72 bp GGAGGGGGTCTCTCACAGAGATGTACGGCCGAGGTGTaGGCAGATCCTGCTAGGACAGGTATGCCTTGCTTT +
Preference number: 3 (lower is better)
Translates to: GGGLSQRCTAEV*ADPARTGMPCF
Trigger: AAAGCAAGGCATACCTGTCCTAGCAGGATCTGCCCACACCTCGGCCGTACATCTCTGTGAGAGACCCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 72 bp CAGACCAGAGCCCAGGGTAGTATAGAGTCCCAACTCTaGGCCCTGACTGCAGGTCATTCAGGTCCCAGTCAC +
Preference number: 3 (lower is better)
Translates to: QTRAQGSIESQL*ALTAGHSGPSH
Trigger: GTGACTGGGACCTGAATGACCTGCAGTCAGGGCCCAGAGTTGGGACTCTATACTACCCTGGGCTCTGGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CAA 90 bp AGAACCTTTATGCACTCTCTCCCACCTAGACCGAGAAGTGTGCAGCAGCCGTACCTCCCTCTATGCCTCTaGCGGCCTTCCCAGCTGAAG +
Preference number: 3 (lower is better)
Translates to: RTFMHSLPPRPRSVQQPYLPLCL*RPSQLK
Trigger: CTTCAGCTGGGAAGGCCGCAAGAGGCATAGAGGGAG...GTACGGCTGCTGCACACTTCTCGGTCTAGGTGGGAGAGAGTGCATAAAGGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR TCA 72 bp CTCCTGGGGAAGCTGACAGGACTCCCAGAACAACCCTaGTCCAGGGACCCTGTTCATGCACTTCTGCATGCT +
Preference number: 3 (lower is better)
Translates to: LLGKLTGLPEQP*SRDPVHALLHA
Trigger: AGCATGCAGAAGTGCATGAACAGGGTCCCTGGATCAGGGTTGTTCTGGGAGTCCTGTCAGCTTCCCCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 72 bp CTTCAAGGAGCATGCCATGGCTTGGGAATGGTTCTCTaGCAGCAGGATTCCCAGGCATGCCTAGCTGTGTGC +
Preference number: 3 (lower is better)
Translates to: LQGACHGLGMVL*QQDSQACLAVC
Trigger: GCACACAGCTAGGCATGCCTGGGAATCCTGCTGCCAGAGAACCATTCCCAAGCCATGGCATGCTCCTTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CAA 90 bp CACATTCACTGTGCCCCTACCTGCTGGAGTACCCATTGCCATCTGACTCCTTGGGGGTGGGAGTGTGTGTaGATCTCGTGGCATGGAAAG +
Preference number: 3 (lower is better)
Translates to: HIHCAPTCWSTHCHLTPWGWECV*ISWHGK
Trigger: CTTTCCATGCCACGAGATCAACACACACTCCCACCC...CCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGCACAGTGAATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 72 bp GTAGCCCTCGCGGAGGGGCCAGACACAGGCCAATCCTaGATCATACTCACGTGCAAAAAGCCAGACAACTTT +
Preference number: 3 (lower is better)
Translates to: VALAEGPDTGQS*IILTCKKPDNF
Trigger: AAAGTTGTCTGGCTTTTTGCACGTGAGTATGATCCAGGATTGGCCTGTGTCTGGCCCCTCCGCGAGGGCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 72 bp AGCTTGAGCTTACAGTTCCCAAGCCTGCAGGGTGGATaGTGCCATCCAAGGAGAAATAGCGGTAGTGGAGGG +
Preference number: 3 (lower is better)
Translates to: SLSLQFPSLQGG*CHPRRNSGSGG
Trigger: CCCTCCACTACCGCTATTTCTCCTTGGATGGCACCATCCACCCTGCAGGCTTGGGAACTGTAAGCTCAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CAA 90 bp AGGGCTTTCTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACTCCCAGCTGAAGAGGTaGCTCAGCTTGGTAAGTACG +
Preference number: 3 (lower is better)
Translates to: RAFCSCLRARLGHQALCYSQLKR*LSLVST
Trigger: CGTACTTACCAAGCTGAGCAACCTCTTCAGCTGGGA...GTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAGAAAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 72 bp CCTTTATGCACTCTCTCCCACCTAGACCGAGAAGTGTaGAGCAGCCGTACTAAGGCCTGCTTACTGCTGAGT +
Preference number: 3 (lower is better)
Translates to: PLCTLSHLDREV*SSRTKACLLLS
Trigger: ACTCAGCAGTAAGCAGGCCTTAGTACGGCTGCTGCACACTTCTCGGTCTAGGTGGGAGAGAGTGCATAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 72 bp TTGAGCTTACAGTTCCCAAGCCTGCAGGGTGGATGGTaGCATCCAAGGAGAAATAGCGGTAGTGGAGGGAGT +
Preference number: 3 (lower is better)
Translates to: LSLQFPSLQGGW*HPRRNSGSGGS
Trigger: ACTCCCTCCACTACCGCTATTTCTCCTTGGATGGCACCATCCACCCTGCAGGCTTGGGAACTGTAAGCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 72 bp AGAAAGGAGGATGGCACCATGGTATCTCGCCAGCGCTaGCACAAAGTTCTAGTGCCCTCTAGAAACTGGACC +
Preference number: 3 (lower is better)
Translates to: RKEDGTMVSRQR*HKVLVPSRNWT
Trigger: GGTCCAGTTTCTAGAGGGCACTAGAACTTTGTGCCAGCGCTGGCGAGATACCATGGTGCCATCCTCCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 72 bp GCCTTCATACATACACACATTCACTGTGCCCCTACCTaGTGGAGTACCCATTGCCATCTGACTCCTTGGCTG +
Preference number: 3 (lower is better)
Translates to: AFIHTHIHCAPT*WSTHCHLTPWL
Trigger: CAGCCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGCACAGTGAATGTGTGTATGTATGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 72 bp GGGCCAGACACAGGCCAATCCTGGATCATACTCACGTaGAAAAAGCCAGACAACTTTCAACAGGGAACTGCC +
Preference number: 3 (lower is better)
Translates to: GPDTGQSWIILT*KKPDNFQQGTA
Trigger: GGCAGTTCCCTGTTGAAAGTTGTCTGGCTTTTTGCACGTGAGTATGATCCAGGATTGGCCTGTGTCTGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 72 bp ATTGTGAAAACTGGCTGTGTTCCCAGCAAGAGATACTaGACCCTCCTGACCGAGCAGTCAGGCTTCCCTTTC +
Preference number: 3 (lower is better)
Translates to: IVKTGCVPSKRY*TLLTEQSGFPF
Trigger: GAAAGGGAAGCCTGACTGCTCGGTCAGGAGGGTGCAGTATCTCTTGCTGGGAACACAGCCAGTTTTCACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 72 bp GCAAGAACTCTTATTGTGGGAGAGGCTGAACCCAGGTaGTTTCTAGGGGCCCTAGCAGCTTTACGAGTCCAT +
Preference number: 3 (lower is better)
Translates to: ARTLIVGEAEPR*FLGALAALRVH
Trigger: ATGGACTCGTAAAGCTGCTAGGGCCCCTAGAAACCACCTGGGTTCAGCCTCTCCCACAATAAGAGTTCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 72 bp TTCAGCTATCTGGAGAAGTGTAATCTGAGGGCCACTTaGCATCCTGAGTTAACACAGGGATGCCGCAGCTGG +
Preference number: 3 (lower is better)
Translates to: FSYLEKCNLRAT*HPELTQGCRSW
Trigger: CCAGCTGCGGCATCCCTGTGTTAACTCAGGATGCCAAGTGGCCCTCAGATTACACTTCTCCAGATAGCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CAA 90 bp GTTACAGAGAAGCTGCCTAAACTCACTCCCAACTGCCCAATACCATTAGGGACTGGGTGGGAGTGTGTGTaGATCTCGTGGCATGGAAAG +
Preference number: 3 (lower is better)
Translates to: VTEKLPKLTPNCPIPLGTGWECV*ISWHGK
Trigger: CTTTCCATGCCACGAGATCAACACACACTCCCACCC...AGTCCCTAATGGTATTGGGCAGTTGGGAGTGAGTTTAGGCAGCTTCTCTGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR TCA 72 bp AAGACAGCCCTGAGAGCTGGGTTCCTACTGCCTCTGTaGGACACAGCAAACCTGGAGAAATCAAATGCGCTA +
Preference number: 3 (lower is better)
Translates to: KTALRAGFLLPL*DTANLEKSNAL
Trigger: TAGCGCATTTGATTTCTCCAGGTTTGCTGTGTCTCACAGAGGCAGTAGGAACCCAGCTCTCAGGGCTGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR TCA 72 bp GGCCCTGACTGCAGGTCATTCAGGTCCCAGTCACAGTaGAAGCAGACTCATTCAGCTATCTGGAGAAGTGTA +
Preference number: 3 (lower is better)
Translates to: GPDCRSFRSQSQ*KQTHSAIWRSV
Trigger: TACACTTCTCCAGATAGCTGAATGAGTCTGCTTTCACTGTGACTGGGACCTGAATGACCTGCAGTCAGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 72 bp TTCATACATACACACATTCACTGTGCCCCTACCTGCTaGAGTACCCATTGCCATCTGACTCCTTGGCTGAGC +
Preference number: 3 (lower is better)
Translates to: FIHTHIHCAPTC*STHCHLTPWLS
Trigger: GCTCAGCCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGCACAGTGAATGTGTGTATGTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR TCA 72 bp TCCACACTTAGGCTAGAAAGCTCAGCCTGTCTTTCCTaGCTCCACCAAAAGATCCAGCCAACTCCCTCTTTG +
Preference number: 3 (lower is better)
Translates to: STLRLESSACLS*LHQKIQPTPSL
Trigger: CAAAGAGGGAGTTGGCTGGATCTTTTGGTGGAGTCAGGAAAGACAGGCTGAGCTTTCTAGCCTAAGTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 72 bp GAATGGGCCCCCAGGAGGCCAGAGATACTAGTTTCTTaGGGGACAGTGGGAACAAAGAAATCAAGAGAACTT +
Preference number: 3 (lower is better)
Translates to: EWAPRRPEILVS*GTVGTKKSREL
Trigger: AAGTTCTCTTGATTTCTTTGTTCCCACTGTCCCCCAAGAAACTAGTATCTCTGGCCTCCTGGGGGCCCATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 72 bp CCAGGTGGCCATAAACTCAAACAAGAGCCTAGCCCTTaGCTTATTACCGGTGGCTACTACAAACCTACAGAC +
Preference number: 3 (lower is better)
Translates to: PGGHKLKQEPSP*LITGGYYKPTD
Trigger: GTCTGTAGGTTTGTAGTAGCCACCGGTAATAAGCCAAGGGCTAGGCTCTTGTTTGAGTTTATGGCCACCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 72 bp TTTCCTAGCCATCCTAAGTTGCGTTCTAGGAAACTCTaGATCTCAGCCTCATCTCCAGCTTTGCCTGGACCT +
Preference number: 3 (lower is better)
Translates to: FPSHPKLRSRKL*ISASSPALPGP
Trigger: AGGTCCAGGCAAAGCTGGAGATGAGGCTGAGATCCAGAGTTTCCTAGAACGCAACTTAGGATGGCTAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR TCA 72 bp GAAAGGAAAGCTAGACTTGGAGAAGAGTTGGGGAAGTaGACTTCACCACTCTGCAGAATTGTTCTGGGGCAG +
Preference number: 3 (lower is better)
Translates to: ERKARLGEELGK*TSPLCRIVLGQ
Trigger: CTGCCCCAGAACAATTCTGCAGAGTGGTGAAGTTCACTTCCCCAACTCTTCTCCAAGTCTAGCTTTCCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 72 bp GGTAAGTACGACTACAACACACTACTACCCCAAGGGTaGGAGTGTGTGTTGATCTCGTGGCATGGAAAGAAT +
Preference number: 3 (lower is better)
Translates to: GKYDYNTLLPQG*ECVLISWHGKN
Trigger: ATTCTTTCCATGCCACGAGATCAACACACACTCCCACCCTTGGGGTAGTAGTGTGTTGTAGTCGTACTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 72 bp TTGAAGGGCTTTCTGCAGTTGTTTAAGGGCCAGGCTTaGCCACCAAGCCCTTTGCTACATAAAGTTGATGTG +
Preference number: 3 (lower is better)
Translates to: LKGFLQLFKGQA*PPSPLLHKVDV
Trigger: CACATCAACTTTATGTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAGAAAGCCCTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CAA 90 bp CTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACATAAAGTTAAGAGGTTGCTCAGCTaGGTAAGTACGACTACAACA +
Preference number: 3 (lower is better)
Translates to: LQLFKGQAWPPSPLLHKVKRLLS*VSTTTT
Trigger: TGTTGTAGTCGTACTTACCAAGCTGAGCAACCTCTT...AACTTTATGTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CAA 90 bp ATTCCCTCCCAAGAACCTACATGGTTACCAACCATGACTTGGCTGACAGCAGTGAAGAGGTTGCTCAGCTaGGTAAGTACGACTACAACA +
Preference number: 3 (lower is better)
Translates to: IPSQEPTWLPTMTWLTAVKRLLS*VSTTTT
Trigger: TGTTGTAGTCGTACTTACCAAGCTGAGCAACCTCTT...CACTGCTGTCAGCCAAGTCATGGTTGGTAACCATGTAGGTTCTTGGGAGGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CAA 90 bp CATACACAGTCTAGGCATTGTGAAAACTGGCTGTGTTCCCAGCAAGAGATACTGATGCCTGACAGAGTTTaGTGGCTGAGGCTATCCTTC +
Preference number: 3 (lower is better)
Translates to: HTQSRHCENWLCSQQEILMPDRV*WLRLSF
Trigger: GAAGGATAGCCTCAGCCACAAAACTCTGTCAGGCAT...CAGTATCTCTTGCTGGGAACACAGCCAGTTTTCACAATGCCTAGACTGTGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 72 bp CAAACATCTACTCTAAAGCAAGGTACGACCCCTGCTTaGTTCCCACCAATTTCAGATCTCTATCTGGGCAAG +
Preference number: 3 (lower is better)
Translates to: QTSTLKQGTTPA*FPPISDLYLGK
Trigger: CTTGCCCAGATAGAGATCTGAAATTGGTGGGAAGCAAGCAGGGGTCGTACCTTGCTTTAGAGTAGATGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 72 bp GCAAATAGACATACACAGTCTAGGCATTGTGAAAACTaGCTGTGTTCCCAGCAAGAGATACTGCACCCTCCT +
Preference number: 3 (lower is better)
Translates to: ANRHTQSRHCEN*LCSQQEILHPP
Trigger: AGGAGGGTGCAGTATCTCTTGCTGGGAACACAGCCAGTTTTCACAATGCCTAGACTGTGTATGTCTATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CAA 90 bp ATGAGAGCATATTACTTCTACTTAAGTCAAAACAAGTCCTTCACCTATAAAGCCTTGCCATCTGACTCCTaGGCTGAGCGGACGACTGGG +
Preference number: 3 (lower is better)
Translates to: MRAYYFYLSQNKSFTYKALPSDS*AERTTG
Trigger: CCCAGTCGTCCGCTCAGCCAAGGAGTCAGATGGCAA...GGCTTTATAGGTGAAGGACTTGTTTTGACTTAAGTAGAAGTAATATGCTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CAA 90 bp GAAATTTGTGCTTGCATAACAGAGCCATGGAAATGGCTATCCCAGCATCTCCCCAGAAACTGGACCATGTaGCAAAAGCTAATCGTTGGA +
Preference number: 3 (lower is better)
Translates to: EICACITEPWKWLSQHLPRNWTM*QKLIVG
Trigger: TCCAACGATTAGCTTTTGCAACATGGTCCAGTTTCT...GGGGAGATGCTGGGATAGCCATTTCCATGGCTCTGTTATGCAAGCACAAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR TCA 72 bp ATCTCTATCTGGGCAAGAAGCCTCCACCAGGGTAAATaGCAAATGAGCAAAAGCTTGAGCTTACAGTTCCCA +
Preference number: 3 (lower is better)
Translates to: ISIWARSLHQGK*QMSKSLSLQFP
Trigger: TGGGAACTGTAAGCTCAAGCTTTTGCTCATTTGTCATTTACCCTGGTGGAGGCTTCTTGCCCAGATAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR TCA 72 bp TCTATCTGTTCTGCCCCTCCCGCCTGTATCATGAGATaGCTGAAAATTCCAGGTGGCCATAAACTCAAACAA +
Preference number: 3 (lower is better)
Translates to: SICSAPPACIMR*LKIPGGHKLKQ
Trigger: TTGTTTGAGTTTATGGCCACCTGGAATTTTCAGTCATCTCATGATACAGGCGGGAGGGGCAGAACAGATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 72 bp TTTCCAAACATCTACTCTAAAGCAAGGTACGACCCCTaGTTGCTTCCCACCAATTTCAGATCTCTATCTGGG +
Preference number: 3 (lower is better)
Translates to: FPNIYSKARYDP*LLPTNFRSLSG
Trigger: CCCAGATAGAGATCTGAAATTGGTGGGAAGCAAGCAGGGGTCGTACCTTGCTTTAGAGTAGATGTTTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CCA 72 bp ACTGATGCTTGTCATTCAATGCCTGACAGAGTTTTGTaGCTGAGGCTATCCTTCTCCACACTTAGGCTAGAA +
Preference number: 3 (lower is better)
Translates to: TDACHSMPDRVL*LRLSFSTLRLE
Trigger: TTCTAGCCTAAGTGTGGAGAAGGATAGCCTCAGCCACAAAACTCTGTCAGGCATTGAATGACAAGCATCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR TCA 72 bp GGTATCTTCCCAGGTATACCTTCTGTTCAGAGAGCATaGGATGAATGGACAAAATCCACAGGCGATCATAAC +
Preference number: 3 (lower is better)
Translates to: GIFPGIPSVQRA*DEWTKSTGDHN
Trigger: GTTATGATCGCCTGTGGATTTTGTCCATTCATCTCATGCTCTCTGAACAGAAGGTATACCTGGGAAGATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CAA 90 bp CATACACAGTCTAGGCATTGTGAAAACTGGCTGTGTTCCCAGCAAGAGATACTGCTTTGCTACATAAAGTaGATGTGGCCTTCATACATA +
Preference number: 3 (lower is better)
Translates to: HTQSRHCENWLCSQQEILLCYIK*MWPSYI
Trigger: TATGTATGAAGGCCACATCAACTTTATGTAGCAAAG...CAGTATCTCTTGCTGGGAACACAGCCAGTTTTCACAATGCCTAGACTGTGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR TCA 72 bp TGCAGTAAGAGAAAACCAGGAAGTCCATCTAGGAGATaGAATTTGTGCTTGCATAACAGAGCCATGGAAATG +
Preference number: 3 (lower is better)
Translates to: CSKRKPGSPSRR*NLCLHNRAMEM
Trigger: CATTTCCATGGCTCTGTTATGCAAGCACAAATTTCATCTCCTAGATGGACTTCCTGGTTTTCTCTTACTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 72 bp CACGTGCAAAAAGCCAGACAACTTTCAACAGGGAACTaGCTGATTTCCTACTGGAATGGTTTCAATCTAATT +
Preference number: 3 (lower is better)
Translates to: HVQKARQLSTGN*LISYWNGFNLI
Trigger: AATTAGATTGAAACCATTCCAGTAGGAAATCAGGCAGTTCCCTGTTGAAAGTTGTCTGGCTTTTTGCACGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR-3UTR CAA 90 bp ATGAGAGCATATTACTTCTACTTAAGTCAAAACAAGTCCTTCACCTATAAAGCCGTTACCAACCATGACTaGGCTGACAGCAGTGAGAAA +
Preference number: 3 (lower is better)
Translates to: MRAYYFYLSQNKSFTYKAVTNHD*ADSSEK
Trigger: TTTCTCACTGCTGTCAGCCAAGTCATGGTTGGTAAC...GGCTTTATAGGTGAAGGACTTGTTTTGACTTAAGTAGAAGTAATATGCTCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 72 bp AATTTAAAAACCAAACCTGTCGTAATCTATCTGTTCTaGCCCTCCCGCCTGTATCATGAGATGACTGAAAAT +
Preference number: 3 (lower is better)
Translates to: NLKTKPVVIYLF*PSRLYHEMTEN
Trigger: ATTTTCAGTCATCTCATGATACAGGCGGGAGGGGCAGAACAGATAGATTACGACAGGTTTGGTTTTTAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR GCA 72 bp CTACTAAGTGCAGTAGTGCTTTCTATAAGACCAACTTaGCTTTCCACTTGGTTGGAAAATTTAAAAACCAAA +
Preference number: 3 (lower is better)
Translates to: LLSAVVLSIRPT*LSTWLENLKTK
Trigger: TTTGGTTTTTAAATTTTCCAACCAAGTGGAAAGGCAAGTTGGTCTTATAGAAAGCACTACTGCACTTAGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR TCA 72 bp ATAATTTTCATTCACCCCAAATCCTACGGCAAGCTTTaGCAATGTAACATCTTTATCTTGTGGTTAGGAAAA +
Preference number: 3 (lower is better)
Translates to: IIFIHPKSYGKL*QCNIFILWLGK
Trigger: TTTTCCTAACCACAAGATAAAGATGTTACATTGTCAAAGCTTGCCGTAGGATTTGGGGTGAATGAAAATTAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp CAGAGATGTACGGCCGAGGTGTGGGCAGATCCTGCTAGGACAGGTATGCCTTGCGGGGGCTTGTTCCTCTaGCTGCCGGGCCCGCCGGCT +
Preference number: 4 (lower is better)
Translates to: QRCTAEVWADPARTGMPCGGLFL*LPGPPA
Trigger: AGCCGGCGGGCCCGGCAGTCAGAGGAACAAGCCCCC...GCAAGGCATACCTGTCCTAGCAGGATCTGCCCACACCTCGGCCGTACATCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CTGAGCGGACGACTGGGCCACAGCAGCCCTGCAGTGTGCTTCCTCTCCCTCTATGCCACCCTGGCCCCCTaGTGTAGCTGCCGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: LSGRLGHSSPAVCFLSLYATLAP*CSCRLG
Trigger: ACCAAGGCGGCAGCTACAGCAGGGGGCCAGGGTGGC...ATAGAGGGAGAGGAAGCACACTGCAGGGCTGCTGTGGCCCAGTCGTCCGCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACGGAGATCCTGCCCGCTaGGCCGTTCGCCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: GPGSPLRAKASSGGRPIYGDPAR*AVRPHQ
Trigger: CTGGTGGGGGCGAACGGCCCAGCGGGCAGGATCTCC...GTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp GGCTGGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATCAGTTCCTGGCTGGCTaGGCCAGGGAGCCCACTGAG +
Preference number: 4 (lower is better)
Translates to: GWAREPTEGQSFIWRKAYQFLAG*AREPTE
Trigger: CTCAGTGGGCTCCCTGGCCCAGCCAGCCAGGAACTG...ATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR TCA 90 bp GGCTGGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATTGCTGCCACTGCTGCTaGGGTAGGACTCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: GWAREPTEGQSFIWRKAYCCHCC*GRTPPG
Trigger: CCCTGGTGGAGTCCTACCTCAGCAGCAGTGGCAGCA...ATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp GGCTGGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATCTTGTCTTCTGCCAGTaGTGCTGGCCCGCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: GWAREPTEGQSFIWRKAYLVFCQ*CWPAGA
Trigger: GGCACCAGCGGGCCAGCAGCACTGGCAGAAGACAAG...ATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp GGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACTTCGCCCCCACCAGCTaGCGTCTCCCCTGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: GPGSPLRAKASSGGRPIYFAPTS*RLPCVL
Trigger: CAGGACGCAGGGGAGACGGCAGCTGGTGGGGGCGAA...GTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp GGCTGGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATGAAGTGGGGAGGGCATaGAGAATGGGCCCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GWAREPTEGQSFIWRKAYEVGRA*RMGPQE
Trigger: CTCCTGGGGGCCCATTCTGCATGCCCTCCCCACTTC...ATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CAA 72 bp CCCTACCTGCTGGAGTACCCATTGCCATCTGACTCCTaGGCTGAGCGGACGACTGGGCCACAGCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: PYLLEYPLPSDS*AERTTGPQQPC
Trigger: GCAGGGCTGCTGTGGCCCAGTCGTCCGCTCAGCCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp CACCTAGACCGAGAAGTGTGCAGCAGCCGTACTAAGGCCTGCTTACTGCTGAGTGGGGGCTTGTTCCTCTaGCTGCCGGGCCCGCCGGCT +
Preference number: 4 (lower is better)
Translates to: HLDREVCSSRTKACLLLSGGLFL*LPGPPA
Trigger: AGCCGGCGGGCCCGGCAGTCAGAGGAACAAGCCCCC...ACTCAGCAGTAAGCAGGCCTTAGTACGGCTGCTGCACACTTCTCGGTCTAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp CCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCGGGGGCTTGTTCCTCTaGCTGCCGGGCCCGCCGGCT +
Preference number: 4 (lower is better)
Translates to: PTEGQSFIWRKAYIQRIGGGLFL*LPGPPA
Trigger: AGCCGGCGGGCCCGGCAGTCAGAGGAACAAGCCCCC...GCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp CCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGCTTGTTCCTCTGACTaGCGGGCCCGCCGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: PGSPLRAKASSGGRPIYRACSSD*RARRLR
Trigger: CCGGAGCCGGCGGGCCCGGCAGTCAGAGGAACAAGC...TCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp CATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCTTGTTCCTCTGACTaGCGGGCCCGCCGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: HLAEGLYTEDRQGCLHRQACSSD*RARRLR
Trigger: CCGGAGCCGGCGGGCCCGGCAGTCAGAGGAACAAGC...CTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp CTGAGCGGACGACTGGGCCACAGCAGCCCTGCAGTGTGCTTCCTCTCCCTCTATGCCCCCTGCTGTAGCTaGCGCCTTGGTTCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: LSGRLGHSSPAVCFLSLYAPCCS*RLGSLG
Trigger: GCCAAGAGAACCAAGGCGGCAGCTACAGCAGGGGGC...ATAGAGGGAGAGGAAGCACACTGCAGGGCTGCTGTGGCCCAGTCGTCCGCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGTTCGCCCCCACCAGCTaGCGTCTCCCCTGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: AREPTEGQSFIWRKAYIQFAPTS*RLPCVL
Trigger: CAGGACGCAGGGGAGACGGCAGCTGGTGGGGGCGAA...CTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp CATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGTGGCACGGAGATCCTaGCCGCTGGGCCGTTCGCCC +
Preference number: 4 (lower is better)
Translates to: HLAEGLYTEDRQGCLHRQVARRS*PLGRSP
Trigger: GGGCGAACGGCCCAGCGGGCAGGATCTCCGTGCCAC...CTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp CCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGTGGCACGGAGATCCTaGCCGCTGGGCCGTTCGCCC +
Preference number: 4 (lower is better)
Translates to: PGSPLRAKASSGGRPIYRVARRS*PLGRSP
Trigger: GGGCGAACGGCCCAGCGGGCAGGATCTCCGTGCCAC...TCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp AGGGCTTTCTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACCAGGGCCCCGGCTGCTaGCTCTGCGAGCGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RAFCSCLRARLGHQALCYQGPGC*LCERLP
Trigger: AGGCAGCCGCTCGCAGAGCCAGCAGCCGGGGCCCTG...GTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAGAAAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299506.3
CDS-3UTR CCA 90 bp GCCCCTACCTGCTGGAGTACCCATTGCCATCTGACTCCTTGGCTGAGCGGACGAGTGCTGTTGGGCGCGTaGCTCCCAGCTGCACACTGG +
Preference number: 4 (lower is better)
Translates to: APTCWSTHCHLTPWLSGRVLLGA*LPAAHW
Trigger: CCAGTGTGCAGCTGGGAGCCACGCGCCCAACAGCAC...TCGTCCGCTCAGCCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGGTCTCCCCTGCGTCCTaGGCGTGGTCTGACTGGCCC +
Preference number: 4 (lower is better)
Translates to: AREPTEGQSFIWRKAYIQVSPAS*AWSDWP
Trigger: GGGCCAGTCAGACCACGCCCAGGACGCAGGGGAGAC...CTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp GGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACCAGTTCCTGGCTGGCTaGGCCAGGGAGCCCACTGAG +
Preference number: 4 (lower is better)
Translates to: GPGSPLRAKASSGGRPIYQFLAG*AREPTE
Trigger: CTCAGTGGGCTCCCTGGCCCAGCCAGCCAGGAACTG...GTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR TCA 90 bp GGCTGGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATCTGCACACTGGCGAGTaGGTCGGCCTCTTGAACTTG +
Preference number: 4 (lower is better)
Translates to: GWAREPTEGQSFIWRKAYLHTGE*VGLLNL
Trigger: CAAGTTCAAGAGGCCGACTCACTCGCCAGTGTGCAG...ATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR TCA 90 bp CTGAGCGGACGACTGGGCCACAGCAGCCCTGCAGTGTGCTTCCTCTCCCTCTATCCCAACTCTGGGCCCTaGCTGCAGGTCATTCAGGTC +
Preference number: 4 (lower is better)
Translates to: LSGRLGHSSPAVCFLSLYPNSGP*LQVIQV
Trigger: GACCTGAATGACCTGCAGTCAGGGCCCAGAGTTGGG...ATAGAGGGAGAGGAAGCACACTGCAGGGCTGCTGTGGCCCAGTCGTCCGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGCCACCCTGGCCCCCTaGTGTAGCTGCCGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: PGSPLRAKASSGGRPIYRATLAP*CSCRLG
Trigger: ACCAAGGCGGCAGCTACAGCAGGGGGCCAGGGTGGC...TCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp TTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCGTGGCACGGAGATCCTaGCCGCTGGGCCGTTCGCCC +
Preference number: 4 (lower is better)
Translates to: FIWRKAYIQRIGRAVSTGVARRS*PLGRSP
Trigger: GGGCGAACGGCCCAGCGGGCAGGATCTCCGTGCCAC...GCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp GGCTGGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATCCTGACAGGGTCCTaGCACTTACCTGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: GWAREPTEGQSFIWRKAYILTGS*HLPVPT
Trigger: GGTGGGGACAGGTAAGTGGCAGGACCCTGTCAGGAT...ATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GGCTGGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATGTTTCCTGGGGGTTGTaGTGGGCTGCTCAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: GWAREPTEGQSFIWRKAYVSWGL*WAAQQR
Trigger: TCTCTGCTGAGCAGCCCAGCACAACCCCCAGGAAAC...ATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCCGCGGCGAGGCGAGATaGGCGAAGCTCCGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: FIWRKAYIQRIGRAVSTGRGEAR*AKLREC
Trigger: GCACTCCCGGAGCTTCGCCCATCTCGCCTCGCCGCG...GCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299506.3
CDS-3UTR CCA 90 bp CCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCCTAGCGGCGCCACCCTaGCCCCCTGCTGTAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PTEGQSFIWRKAYIQRIGLAAPP*PPAVAA
Trigger: GGCAGCTACAGCAGGGGGCCAGGGTGGCGCCGCTAG...GCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp CACCTAGACCGAGAAGTGTGCAGCAGCCGTACTAAGGCCTGCTTACTGCTGAGTCTAGCGGCGCCACCCTaGCCCCCTGCTGTAGCTGCC +
Preference number: 4 (lower is better)
Translates to: HLDREVCSSRTKACLLLSLAAPP*PPAVAA
Trigger: GGCAGCTACAGCAGGGGGCCAGGGTGGCGCCGCTAG...ACTCAGCAGTAAGCAGGCCTTAGTACGGCTGCTGCACACTTCTCGGTCTAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCCTAGCGGCGCCACCCTaGCCCCCTGCTGTAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GQSFIWRKAYIQRIGRAVLAAPP*PPAVAA
Trigger: GGCAGCTACAGCAGGGGGCCAGGGTGGCGCCGCTAG...GACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp TGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCAGCCTGCGTCCTGGGCGTaGTCTGACTGGCCCACAGTC +
Preference number: 4 (lower is better)
Translates to: WRKAYIQRIGRAVSTGRQPASWA*SDWPTV
Trigger: GACTGTGGGCCAGTCAGACCACGCCCAGGACGCAGG...CTGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp CAGAGATGTACGGCCGAGGTGTGGGCAGATCCTGCTAGGACAGGTATGCCTTGCCCTGCGTCCTGGGCGTaGTCTGACTGGCCCACAGTC +
Preference number: 4 (lower is better)
Translates to: QRCTAEVWADPARTGMPCPASWA*SDWPTV
Trigger: GACTGTGGGCCAGTCAGACCACGCCCAGGACGCAGG...GCAAGGCATACCTGTCCTAGCAGGATCTGCCCACACCTCGGCCGTACATCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCGGAGATCCTGCCCGCTaGGCCGTTCGCCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: PTEGQSFIWRKAYIQRIGGDPAR*AVRPHQ
Trigger: CTGGTGGGGGCGAACGGCCCAGCGGGCAGGATCTCC...GCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR TCA 90 bp AGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGGTCCGGTGGCTGCTaGCTCCCTCCATCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: SFIWRKAYIQRIGRAVSTGSGGC*LPPSPP
Trigger: AGGCGGCGATGGAGGGAGTCAGCAGCCACCGGACCC...TGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534099.5
CDS-3UTR GCA 90 bp AGGGCTTTCTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACGCCACCCTGGCCCCCTaGTGTAGCTGCCGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: RAFCSCLRARLGHQALCYATLAP*CSCRLG
Trigger: ACCAAGGCGGCAGCTACAGCAGGGGGCCAGGGTGGC...GTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAGAAAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp TGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCAGCTTGTCTTCTGCCAGTaGTGCTGGCCCGCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: WRKAYIQRIGRAVSTGRQLVFCQ*CWPAGA
Trigger: GGCACCAGCGGGCCAGCAGCACTGGCAGAAGACAAG...CTGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp TTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCTTCGCCCCCACCAGCTaGCGTCTCCCCTGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: FIWRKAYIQRIGRAVSTGFAPTS*RLPCVL
Trigger: CAGGACGCAGGGGAGACGGCAGCTGGTGGGGGCGAA...GCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp TGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCAGGAAGTGGGGAGGGCATaGAGAATGGGCCCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: WRKAYIQRIGRAVSTGRQEVGRA*RMGPQE
Trigger: CTCCTGGGGGCCCATTCTGCATGCCCTCCCCACTTC...CTGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGGCCGCCCATCTGCATTaGCCTGCACCATCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: AREPTEGQSFIWRKAYIQAAHLH*PAPSGA
Trigger: AGCCCCTGATGGTGCAGGCCAATGCAGATGGGCGGC...CTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp CATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGAGCTCCGCTCCAGGCTaGGCAACCCCAAAGGGCACG +
Preference number: 4 (lower is better)
Translates to: HLAEGLYTEDRQGCLHRQSSAPG*ATPKGT
Trigger: CGTGCCCTTTGGGGTTGCCCAGCCTGGAGCGGAGCT...CTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp CATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGCAGTTCCTGGCTGGCTaGGCCAGGGAGCCCACTGAG +
Preference number: 4 (lower is better)
Translates to: HLAEGLYTEDRQGCLHRQQFLAG*AREPTE
Trigger: CTCAGTGGGCTCCCTGGCCCAGCCAGCCAGGAACTG...CTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp CTGAGCGGACGACTGGGCCACAGCAGCCCTGCAGTGTGCTTCCTCTCCCTCTATGAGGGTGTAGAGTTTTaGGGTGTGGCCCCAGAAGCG +
Preference number: 4 (lower is better)
Translates to: LSGRLGHSSPAVCFLSLYEGVEF*GVAPEA
Trigger: CGCTTCTGGGGCCACACCCCAAAACTCTACACCCTC...ATAGAGGGAGAGGAAGCACACTGCAGGGCTGCTGTGGCCCAGTCGTCCGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp GCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGGTCCTGGGCGTGGTCTaGCTGGCCCACAGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: AREPTEGQSFIWRKAYIQVLGVV*LAHSQN
Trigger: ATTCTGACTGTGGGCCAGTCAGACCACGCCCAGGAC...CTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR TCA 90 bp CCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCTGTTGGGCTAGGGGCTaGGGCTGCCTCCCTGACGGA +
Preference number: 4 (lower is better)
Translates to: PTEGQSFIWRKAYIQRIGCWARG*GCLPDG
Trigger: TCCGTCAGGGAGGCAGCCTCAGCCCCTAGCCCAACA...GCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR TCA 90 bp GGCTGGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATGAGGATGAGGCCTTCTaGGGGTTGACTCCATTGTCA +
Preference number: 4 (lower is better)
Translates to: GWAREPTEGQSFIWRKAYEDEAF*GLTPLS
Trigger: TGACAATGGAGTCAACCCTCAGAAGGCCTCATCCTC...ATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR TCA 90 bp GCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGCCACCAAGACAGCCCTaGGAGCTGGGTTCCTACTGC +
Preference number: 4 (lower is better)
Translates to: AREPTEGQSFIWRKAYIQPPRQP*ELGSYC
Trigger: GCAGTAGGAACCCAGCTCTCAGGGCTGTCTTGGTGG...CTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp CTGAGCGGACGACTGGGCCACAGCAGCCCTGCAGTGTGCTTCCTCTCCCTCTATCTCCCAGAACAACCCTaGTCCAGGGACCCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: LSGRLGHSSPAVCFLSLYLPEQP*SRDPVH
Trigger: ATGAACAGGGTCCCTGGATCAGGGTTGTTCTGGGAG...ATAGAGGGAGAGGAAGCACACTGCAGGGCTGCTGTGGCCCAGTCGTCCGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp GCCCCTACCTGCTGGAGTACCCATTGCCATCTGACTCCTTGGCTGAGCGGACGAGTGCAGTCAGGCTGGTaGCCTGGACCCCATTTGTGT +
Preference number: 4 (lower is better)
Translates to: APTCWSTHCHLTPWLSGRVQSGW*PGPHLC
Trigger: ACACAAATGGGGTCCAGGTCACCAGCCTGACTGCAC...TCGTCCGCTCAGCCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCCCGGGGCCGCCCATCTaGATTGGCCTGCACCATCAG +
Preference number: 4 (lower is better)
Translates to: GQSFIWRKAYIQRIGRAVPGPPI*IGLHHQ
Trigger: CTGATGGTGCAGGCCAATGCAGATGGGCGGCCCCGG...GACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp GGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCGCGTGGCTCCCAGCTaGACACTGGCGAGTGAGTCG +
Preference number: 4 (lower is better)
Translates to: GPKLHLAEGLYTEDRQGCRVAPS*TLASES
Trigger: CGACTCACTCGCCAGTGTGCAGCTGGGAGCCACGCG...ACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp CATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCCCCCTGCTGTAGCTaGCGCCTTGGTTCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: HLAEGLYTEDRQGCLHRQAPCCS*RLGSLG
Trigger: GCCAAGAGAACCAAGGCGGCAGCTACAGCAGGGGGC...CTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp GCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGGTCTTCTGCCAGTGCTaGTGGCCCGCTGGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: AREPTEGQSFIWRKAYIQVFCQC*WPAGAF
Trigger: AAAGGCACCAGCGGGCCAGCAGCACTGGCAGAAGAC...CTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp GGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACGAGATGCCCTTCCTCTaGATCGTGGCACGGAGATCC +
Preference number: 4 (lower is better)
Translates to: GPGSPLRAKASSGGRPIYEMPFL*IVARRS
Trigger: GGATCTCCGTGCCACGATGCAGAGGAAGGGCATCTC...GTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp CAGGATTCCCAGGCATGCCTAGCTGTGTGCAGTCAGGCTGGTGACCTGGACCCCTCATGCTGCTGGAGATaGCCTTCCTCTGCATCGTGG +
Preference number: 4 (lower is better)
Translates to: QDSQACLAVCSQAGDLDPSCCWR*PSSASW
Trigger: CCACGATGCAGAGGAAGGGCATCTCCAGCAGCATGA...GGGGTCCAGGTCACCAGCCTGACTGCACACAGCTAGGCATGCCTGGGAATCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GCCCCTACCTGCTGGAGTACCCATTGCCATCTGACTCCTTGGCTGAGCGGACGACCCAGCAAGAGATACTaGACCCTCCTGACCGAGCAG +
Preference number: 4 (lower is better)
Translates to: APTCWSTHCHLTPWLSGRPSKRY*TLLTEQ
Trigger: CTGCTCGGTCAGGAGGGTGCAGTATCTCTTGCTGGG...TCGTCCGCTCAGCCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCGTGCTGTTGGGCGCGTaGCTCCCAGCTGCACACTGG +
Preference number: 4 (lower is better)
Translates to: PTEGQSFIWRKAYIQRIGVLLGA*LPAAHW
Trigger: CCAGTGTGCAGCTGGGAGCCACGCGCCCAACAGCAC...GCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp TTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCCCTGCGTCCTGGGCGTaGTCTGACTGGCCCACAGTC +
Preference number: 4 (lower is better)
Translates to: FIWRKAYIQRIGRAVSTGPASWA*SDWPTV
Trigger: GACTGTGGGCCAGTCAGACCACGCCCAGGACGCAGG...GCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp AAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACGTCTCCCCTGCGTCCTaGGCGTGGTCTGACTGGCCC +
Preference number: 4 (lower is better)
Translates to: KLHLAEGLYTEDRQGCLHVSPAS*AWSDWP
Trigger: GGGCCAGTCAGACCACGCCCAGGACGCAGGGGAGAC...GTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp GGGGAAGTGAACTTCACCACTCTGCAGAATTGTTCTGGGGCAGAGGGTGTAGAGGTCTCCCCTGCGTCCTaGGCGTGGTCTGACTGGCCC +
Preference number: 4 (lower is better)
Translates to: GEVNFTTLQNCSGAEGVEVSPAS*AWSDWP
Trigger: GGGCCAGTCAGACCACGCCCAGGACGCAGGGGAGAC...CTCTACACCCTCTGCCCCAGAACAATTCTGCAGAGTGGTGAAGTTCACTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp GCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGCTTGGTTCTCTTGGCTaGAGCTGGTGCTGTTGGGCG +
Preference number: 4 (lower is better)
Translates to: AREPTEGQSFIWRKAYIQLGSLG*SWCCWA
Trigger: CGCCCAACAGCACCAGCTTCAGCCAAGAGAACCAAG...CTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR TCA 90 bp AAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACTGTTGGGCTAGGGGCTaGGGCTGCCTCCCTGACGGA +
Preference number: 4 (lower is better)
Translates to: KLHLAEGLYTEDRQGCLHCWARG*GCLPDG
Trigger: TCCGTCAGGGAGGCAGCCTCAGCCCCTAGCCCAACA...GTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR TCA 90 bp TTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAGAGAAGGGAAGGCCAGTGTGTTGGGCTAGGGGCTaGGGCTGCCTCCCTGACGGA +
Preference number: 4 (lower is better)
Translates to: LTQGCRSWGKELEKGRPVCWARG*GCLPDG
Trigger: TCCGTCAGGGAGGCAGCCTCAGCCCCTAGCCCAACA...CACTGGCCTTCCCTTCTCTAATTCCTTACCCCAGCTGCGGCATCCCTGTGTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp GCCCCTACCTGCTGGAGTACCCATTGCCATCTGACTCCTTGGCTGAGCGGACGAACAGCTGCCAGCTCCTaGCGTAAGGTTCCACTTTCC +
Preference number: 4 (lower is better)
Translates to: APTCWSTHCHLTPWLSGRTAASS*RKVPLS
Trigger: GGAAAGTGGAACCTTACGTCAGGAGCTGGCAGCTGT...TCGTCCGCTCAGCCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp CAGGATTCCCAGGCATGCCTAGCTGTGTGCAGTCAGGCTGGTGACCTGGACCCCGGTGGGAGTGTGTGTTaGTCTCGTGGCATGGAAAGA +
Preference number: 4 (lower is better)
Translates to: QDSQACLAVCSQAGDLDPGGSVC*SRGMER
Trigger: TCTTTCCATGCCACGAGATCAACACACACTCCCACC...GGGGTCCAGGTCACCAGCCTGACTGCACACAGCTAGGCATGCCTGGGAATCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp AAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCCTGCTTACTGCTaGGTAGCCCTCGCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: KLHLAEGLYTEDRQGCLHRPAYC*VALAEG
Trigger: CCCCTCCGCGAGGGCTACTCAGCAGTAAGCAGGCCT...GTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp GCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGGGCCACTTGGCATCCTaGGTTAACACAGGGATGCCG +
Preference number: 4 (lower is better)
Translates to: AREPTEGQSFIWRKAYIQGHLAS*VNTGMP
Trigger: CGGCATCCCTGTGTTAACTCAGGATGCCAAGTGGCC...CTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp GGCTGGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATAGACCTGGAGCCTGTTaGAATTCCCTGTATTCGCCT +
Preference number: 4 (lower is better)
Translates to: GWAREPTEGQSFIWRKAYRPGAC*NSLYSP
Trigger: AGGCGAATACAGGGAATTTCAACAGGCTCCAGGTCT...ATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305253.8
CDS-3UTR GCA 90 bp CTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCATTCTTCTTCTGCTTCTaGTCCAGCAGGGCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: LAEGLYTEDRQGCLHRQAFFFCF*SSRARC
Trigger: GCAGCGGGCCCTGCTGGAGCAGAAGCAGAAGAAGAA...TGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp AGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACACGCGTGGCTCCCAGCTaGACACTGGCGAGTGAGTCG +
Preference number: 4 (lower is better)
Translates to: SFIWRKAYIQRIGRAVSTRVAPS*TLASES
Trigger: CGACTCACTCGCCAGTGTGCAGCTGGGAGCCACGCG...TGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp GGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTGCCCCCTGCTGTAGCTaGCGCCTTGGTTCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: GPKLHLAEGLYTEDRQGCAPCCS*RLGSLG
Trigger: GCCAAGAGAACCAAGGCGGCAGCTACAGCAGGGGGC...ACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp CTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCACTGCTGGCCCGCTGGTaGCTTTGTGCTTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LAEGLYTEDRQGCLHRQALLARW*LCAFPS
Trigger: AGAAGGGAAAGCACAAAGGCACCAGCGGGCCAGCAG...TGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp CCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGTCTTCTGCCAGTGCTaGTGGCCCGCTGGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: PGSPLRAKASSGGRPIYRVFCQC*WPAGAF
Trigger: AAAGGCACCAGCGGGCCAGCAGCACTGGCAGAAGAC...TCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp GCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGCCCACAGTCAGAATCTaGACTGGGCCTTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: AREPTEGQSFIWRKAYIQPTVRI*TGPWAS
Trigger: TGAGGCCCAAGGCCCAGTGCAGATTCTGACTGTGGG...CTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp GGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGTAGGTGGGGTACATaGCCCGGTCCATCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: GPGSPLRAKASSGGRPIYSRWGT*PGPSLS
Trigger: AGAAAGGGATGGACCGGGGCATGTACCCCACCTACT...GTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp TGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCAGACTCTGGGCCCTGACTaGAGGTCATTCAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: WRKAYIQRIGRAVSTGRQTLGPD*RSFRSQ
Trigger: CTGGGACCTGAATGACCTGCAGTCAGGGCCCAGAGT...CTGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp TGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCAGCCATGGGCCAGGGAGTaGCTCCTGGGAACAAAATCC +
Preference number: 4 (lower is better)
Translates to: WRKAYIQRIGRAVSTGRQPWARE*LLGTKS
Trigger: GGATTTTGTTCCCAGGAGGCACTCCCTGGCCCATGG...CTGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305253.8
CDS-3UTR CCA 90 bp AGGGCTTTCTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACGCCGCCCATCTGCATTaGCCTGCACCATCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: RAFCSCLRARLGHQALCYAAHLH*PAPSGA
Trigger: AGCCCCTGATGGTGCAGGCCAATGCAGATGGGCGGC...GTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAGAAAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTGCCGCCCATCTGCATTaGCCTGCACCATCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: GPKLHLAEGLYTEDRQGCAAHLH*PAPSGA
Trigger: AGCCCCTGATGGTGCAGGCCAATGCAGATGGGCGGC...ACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp CATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGCTCCCAGCTGCACACTaGCGAGTGAGTCGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: HLAEGLYTEDRQGCLHRQLPAAH*RVSRPL
Trigger: AAGAGGCCGACTCACTCGCCAGTGTGCAGCTGGGAG...CTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp CAGGATTCCCAGGCATGCCTAGCTGTGTGCAGTCAGGCTGGTGACCTGGACCCCATCTGCACTGGGCCTTaGGCCTCAGACTTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: QDSQACLAVCSQAGDLDPICTGP*ASDLSS
Trigger: AGAAGACAAGTCTGAGGCCCAAGGCCCAGTGCAGAT...GGGGTCCAGGTCACCAGCCTGACTGCACACAGCTAGGCATGCCTGGGAATCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGTCCACTGGTTGCTCTaGAGCTGTTGGGCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: PGSPLRAKASSGGRPIYRVHWLL*SCWARG
Trigger: GCCCCTAGCCCAACAGCTCCAGAGCAACCAGTGGAC...TCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp AAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGCTCCGCTCCAGGCTaGGCAACCCCAAAGGGCACG +
Preference number: 4 (lower is better)
Translates to: KLHLAEGLYTEDRQGCLHSSAPG*ATPKGT
Trigger: CGTGCCCTTTGGGGTTGCCCAGCCTGGAGCGGAGCT...GTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp TTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAGAGAAGGGAAGGCCAGTGAGCTCCGCTCCAGGCTaGGCAACCCCAAAGGGCACG +
Preference number: 4 (lower is better)
Translates to: LTQGCRSWGKELEKGRPVSSAPG*ATPKGT
Trigger: CGTGCCCTTTGGGGTTGCCCAGCCTGGAGCGGAGCT...CACTGGCCTTCCCTTCTCTAATTCCTTACCCCAGCTGCGGCATCCCTGTGTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGATGCCATCTGACTCCTTaGCTGAGCGGACGACTGGGC +
Preference number: 4 (lower is better)
Translates to: PGSPLRAKASSGGRPIYRCHLTP*LSGRLG
Trigger: GCCCAGTCGTCCGCTCAGCCAAGGAGTCAGATGGCA...TCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TGGGGAGGGCATGCAGAATGGGCCCCCAGGAGGCCAGAGATACTAGTTTCTTGGGACAGCCCTGAGAGCTaGGTTCCTACTGCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: WGGHAEWAPRRPEILVSWDSPES*VPTASV
Trigger: CACAGAGGCAGTAGGAACCCAGCTCTCAGGGCTGTC...CCAAGAAACTAGTATCTCTGGCCTCCTGGGGGCCCATTCTGCATGCCCTCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACGAGCATGCCATGGCTTaGGAATGGTTCTCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: GPGSPLRAKASSGGRPIYEHAMA*EWFSGS
Trigger: GCTGCCAGAGAACCATTCCCAAGCCATGGCATGCTC...GTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp AGGGCTTTCTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACGAGTCCATGCACCCATaGCCCCAGGGCCAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: RAFCSCLRARLGHQALCYESMHP*PQGQWS
Trigger: TGACCACTGGCCCTGGGGCCATGGGTGCATGGACTC...GTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAGAAAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCAGAGGCTGAACCCAGGTaGTTTCTAGGGGCCCTAGCA +
Preference number: 4 (lower is better)
Translates to: LAEGLYTEDRQGCLHRQAEAEPR*FLGALA
Trigger: TGCTAGGGCCCCTAGAAACCACCTGGGTTCAGCCTC...TGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CTGAGCGGACGACTGGGCCACAGCAGCCCTGCAGTGTGCTTCCTCTCCCTCTATCAAGAGCCTAGCCCTTaGCTTATTACCGGTGGCTAC +
Preference number: 4 (lower is better)
Translates to: LSGRLGHSSPAVCFLSLYQEPSP*LITGGY
Trigger: GTAGCCACCGGTAATAAGCCAAGGGCTAGGCTCTTG...ATAGAGGGAGAGGAAGCACACTGCAGGGCTGCTGTGGCCCAGTCGTCCGCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCTCCTGGCCCCCATCGTaGCCACAGGATGGAGTGGGT +
Preference number: 4 (lower is better)
Translates to: PTEGQSFIWRKAYIQRIGSWPPS*PQDGVG
Trigger: ACCCACTCCATCCTGTGGCCACGATGGGGGCCAGGA...GCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305253.8
CDS-3UTR TCA 90 bp GGCTGGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATAGGCCTTCTGAGGGTTaGCTCCATTGTCATAAACAG +
Preference number: 4 (lower is better)
Translates to: GWAREPTEGQSFIWRKAYRPSEG*LHCHKQ
Trigger: CTGTTTATGACAATGGAGTCAACCCTCAGAAGGCCT...ATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR TCA 90 bp GCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGACAGCTGCCAGCTCCTaGCGTAAGGTTCCACTTTCC +
Preference number: 4 (lower is better)
Translates to: AREPTEGQSFIWRKAYIQTAASS*RKVPLS
Trigger: GGAAAGTGGAACCTTACGTCAGGAGCTGGCAGCTGT...CTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR TCA 90 bp CAGGATTCCCAGGCATGCCTAGCTGTGTGCAGTCAGGCTGGTGACCTGGACCCCACAGAGTTTTGTGGCTaGGGCTATCCTTCTCCACAC +
Preference number: 4 (lower is better)
Translates to: QDSQACLAVCSQAGDLDPTEFCG*GYPSPH
Trigger: GTGTGGAGAAGGATAGCCTCAGCCACAAAACTCTGT...GGGGTCCAGGTCACCAGCCTGACTGCACACAGCTAGGCATGCCTGGGAATCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp CAGGATTCCCAGGCATGCCTAGCTGTGTGCAGTCAGGCTGGTGACCTGGACCCCTTTCCTGTGCTGCTTTaGATGCTGAGATCCCATGGG +
Preference number: 4 (lower is better)
Translates to: QDSQACLAVCSQAGDLDPFPVLL*MLRSHG
Trigger: CCCATGGGATCTCAGCATTCAAAGCAGCACAGGAAA...GGGGTCCAGGTCACCAGCCTGACTGCACACAGCTAGGCATGCCTGGGAATCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305253.8
CDS-3UTR GCA 90 bp CATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGTTCTTCTTCTGCTTCTaGTCCAGCAGGGCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: HLAEGLYTEDRQGCLHRQFFFCF*SSRARC
Trigger: GCAGCGGGCCCTGCTGGAGCAGAAGCAGAAGAAGAA...CTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp AAGCAAGGTACGACCCCTGCTTGCTTCCCACCAATTTCAGATCTCTATCTGGGCCCGGGGCCGCCCATCTaGATTGGCCTGCACCATCAG +
Preference number: 4 (lower is better)
Translates to: KQGTTPACFPPISDLYLGPGPPI*IGLHHQ
Trigger: CTGATGGTGCAGGCCAATGCAGATGGGCGGCCCCGG...GCCCAGATAGAGATCTGAAATTGGTGGGAAGCAAGCAGGGGTCGTACCTTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGCTGCTGGCCCGCTGGTaGCTTTGTGCTTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: HLAEGLYTEDRQGCLHRQLLARW*LCAFPS
Trigger: AGAAGGGAAAGCACAAAGGCACCAGCGGGCCAGCAG...CTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp CACCTAGACCGAGAAGTGTGCAGCAGCCGTACTAAGGCCTGCTTACTGCTGAGTGGGGGCCGGCCTCAGTaGAAACTCCTCAAGATCCTG +
Preference number: 4 (lower is better)
Translates to: HLDREVCSSRTKACLLLSGGRPQ*KLLKIL
Trigger: CAGGATCTTGAGGAGTTTGCACTGAGGCCGGCCCCC...ACTCAGCAGTAAGCAGGCCTTAGTACGGCTGCTGCACACTTCTCGGTCTAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCGGGGGCCGGCCTCAGTaGAAACTCCTCAAGATCCTG +
Preference number: 4 (lower is better)
Translates to: PTEGQSFIWRKAYIQRIGGGRPQ*KLLKIL
Trigger: CAGGATCTTGAGGAGTTTGCACTGAGGCCGGCCCCC...GCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp GGGGAAGTGAACTTCACCACTCTGCAGAATTGTTCTGGGGCAGAGGGTGTAGAGGGGCCACAGCAGCCCTaGAGTGTGCTTCCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: GEVNFTTLQNCSGAEGVEGPQQP*SVLPLP
Trigger: AGGGAGAGGAAGCACACTGCAGGGCTGCTGTGGCCC...CTCTACACCCTCTGCCCCAGAACAATTCTGCAGAGTGGTGAAGTTCACTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCACACTGTGCCCCTACCTaGTGGAGTACCCATTGCCAT +
Preference number: 4 (lower is better)
Translates to: LAEGLYTEDRQGCLHRQAHCAPT*WSTHCH
Trigger: ATGGCAATGGGTACTCCAGCAGGTAGGGGCACAGTG...TGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CTGAGCGGACGACTGGGCCACAGCAGCCCTGCAGTGTGCTTCCTCTCCCTCTATTACACACATTCACTGTaGCCCTACCTGCTGGAGTAC +
Preference number: 4 (lower is better)
Translates to: LSGRLGHSSPAVCFLSLYYTHSL*PYLLEY
Trigger: GTACTCCAGCAGGTAGGGGCACAGTGAATGTGTGTA...ATAGAGGGAGAGGAAGCACACTGCAGGGCTGCTGTGGCCCAGTCGTCCGCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGATCCTGACAGGGTCCTaGCACTTACCTGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: HLAEGLYTEDRQGCLHRQILTGS*HLPVPT
Trigger: GGTGGGGACAGGTAAGTGGCAGGACCCTGTCAGGAT...CTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CAGAGATGTACGGCCGAGGTGTGGGCAGATCCTGCTAGGACAGGTATGCCTTGCTACAGTTCCCAAGCCTaGAGGGTGGATGGTGCCATC +
Preference number: 4 (lower is better)
Translates to: QRCTAEVWADPARTGMPCYSSQA*RVDGAI
Trigger: GATGGCACCATCCACCCTGCAGGCTTGGGAACTGTA...GCAAGGCATACCTGTCCTAGCAGGATCTGCCCACACCTCGGCCGTACATCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GCCCCTACCTGCTGGAGTACCCATTGCCATCTGACTCCTTGGCTGAGCGGACGAGAGTTAACACAGGGATaGCGCAGCTGGGGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: APTCWSTHCHLTPWLSGRELTQG*RSWGKE
Trigger: TTCCTTACCCCAGCTGCGGCATCCCTGTGTTAACTC...TCGTCCGCTCAGCCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TCACCCTGTCCCATTCCCTCCCAAGAACCTACATGGTTACCAACCATGACTTGGGTGCTGTTGGGCGCGTaGCTCCCAGCTGCACACTGG +
Preference number: 4 (lower is better)
Translates to: SPCPIPSQEPTWLPTMTWVLLGA*LPAAHW
Trigger: CCAGTGTGCAGCTGGGAGCCACGCGCCCAACAGCAC...CCAAGTCATGGTTGGTAACCATGTAGGTTCTTGGGAGGGAATGGGACAGGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCAGCCGCCTTGGTTCTCTTaGCTGAAGCTGGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: WRKAYIQRIGRAVSTGRQPPWFS*LKLVLL
Trigger: CAACAGCACCAGCTTCAGCCAAGAGAACCAAGGCGG...CTGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp GGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACATCTGCACTGGGCCTTaGGCCTCAGACTTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GPGSPLRAKASSGGRPIYICTGP*ASDLSS
Trigger: AGAAGACAAGTCTGAGGCCCAAGGCCCAGTGCAGAT...GTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp GCCCCTACCTGCTGGAGTACCCATTGCCATCTGACTCCTTGGCTGAGCGGACGAAGTCAGAATCTGCACTaGGCCTTGGGCCTCAGACTT +
Preference number: 4 (lower is better)
Translates to: APTCWSTHCHLTPWLSGRSQNLH*ALGLRL
Trigger: AAGTCTGAGGCCCAAGGCCCAGTGCAGATTCTGACT...TCGTCCGCTCAGCCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GTTACAGAGAAGCTGCCTAAACTCACTCCCAACTGCCCAATACCATTAGGGACTGGAGATCCTGCCCGCTaGGCCGTTCGCCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: VTEKLPKLTPNCPIPLGTGDPAR*AVRPHQ
Trigger: CTGGTGGGGGCGAACGGCCCAGCGGGCAGGATCTCC...AGTCCCTAATGGTATTGGGCAGTTGGGAGTGAGTTTAGGCAGCTTCTCTGTAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAGAGAAGGGAAGGCCAGTGCCTTCCTCTGCATCGTaGCACGGAGATCCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: LTQGCRSWGKELEKGRPVPSSAS*HGDPAR
Trigger: GCGGGCAGGATCTCCGTGCCACGATGCAGAGGAAGG...CACTGGCCTTCCCTTCTCTAATTCCTTACCCCAGCTGCGGCATCCCTGTGTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TTACAGTTCCCAAGCCTGCAGGGTGGATGGTGCCATCCAAGGAGAAATAGCGGTCCTTCCTCTGCATCGTaGCACGGAGATCCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: LQFPSLQGGWCHPRRNSGPSSAS*HGDPAR
Trigger: GCGGGCAGGATCTCCGTGCCACGATGCAGAGGAAGG...ACCGCTATTTCTCCTTGGATGGCACCATCCACCCTGCAGGCTTGGGAACTGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp AGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACACCTTCCTCTGCATCGTaGCACGGAGATCCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: SFIWRKAYIQRIGRAVSTPSSAS*HGDPAR
Trigger: GCGGGCAGGATCTCCGTGCCACGATGCAGAGGAAGG...TGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp CACATTCACTGTGCCCCTACCTGCTGGAGTACCCATTGCCATCTGACTCCTTGGGTCCACTGGTTGCTCTaGAGCTGTTGGGCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: HIHCAPTCWSTHCHLTPWVHWLL*SCWARG
Trigger: GCCCCTAGCCCAACAGCTCCAGAGCAACCAGTGGAC...CCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGCACAGTGAATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CAGGATTCCCAGGCATGCCTAGCTGTGTGCAGTCAGGCTGGTGACCTGGACCCCAACTCCTCAAGATCCTaGACCTCAACGTCCACTGGT +
Preference number: 4 (lower is better)
Translates to: QDSQACLAVCSQAGDLDPNSSRS*TSTSTG
Trigger: ACCAGTGGACGTTGAGGTCCAGGATCTTGAGGAGTT...GGGGTCCAGGTCACCAGCCTGACTGCACACAGCTAGGCATGCCTGGGAATCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CACCTAGACCGAGAAGTGTGCAGCAGCCGTACTAAGGCCTGCTTACTGCTGAGTTTGATGGTGATACCCTaGGGGGCCGGCCTCAGTGCA +
Preference number: 4 (lower is better)
Translates to: HLDREVCSSRTKACLLLSLMVIP*GAGLSA
Trigger: TGCACTGAGGCCGGCCCCCCAGGGTATCACCATCAA...ACTCAGCAGTAAGCAGGCCTTAGTACGGCTGCTGCACACTTCTCGGTCTAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GCCCCTACCTGCTGGAGTACCCATTGCCATCTGACTCCTTGGCTGAGCGGACGACTACTACCCCAAGGGTaGGAGTGTGTGTTGATCTCG +
Preference number: 4 (lower is better)
Translates to: APTCWSTHCHLTPWLSGRLLPQG*ECVLIS
Trigger: CGAGATCAACACACACTCCCACCCTTGGGGTAGTAG...TCGTCCGCTCAGCCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCATGTGCCCCTACCTGCTaGAGTACCCATTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: LAEGLYTEDRQGCLHRQACAPTC*STHCHL
Trigger: CAGATGGCAATGGGTACTCCAGCAGGTAGGGGCACA...TGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp AGGGCTTTCTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACAGGAGGATGGCACCATaGTATCTCGCCAGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: RAFCSCLRARLGHQALCYRRMAP*YLASAG
Trigger: GCCAGCGCTGGCGAGATACCATGGTGCCATCCTCCT...GTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAGAAAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CTGAGCGGACGACTGGGCCACAGCAGCCCTGCAGTGTGCTTCCTCTCCCTCTATCCTGACAGAGTTTTGTaGCTGAGGCTATCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LSGRLGHSSPAVCFLSLYPDRVL*LRLSFS
Trigger: GGAGAAGGATAGCCTCAGCCACAAAACTCTGTCAGG...ATAGAGGGAGAGGAAGCACACTGCAGGGCTGCTGTGGCCCAGTCGTCCGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp CCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCCTGCACACTGGCGAGTaGGTCGGCCTCTTGAACTTG +
Preference number: 4 (lower is better)
Translates to: PTEGQSFIWRKAYIQRIGLHTGE*VGLLNL
Trigger: CAAGTTCAAGAGGCCGACTCACTCGCCAGTGTGCAG...GCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR TCA 90 bp GGGGAAGTGAACTTCACCACTCTGCAGAATTGTTCTGGGGCAGAGGGTGTAGAGGTCCTGGGCGTGGTCTaGCTGGCCCACAGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: GEVNFTTLQNCSGAEGVEVLGVV*LAHSQN
Trigger: ATTCTGACTGTGGGCCAGTCAGACCACGCCCAGGAC...CTCTACACCCTCTGCCCCAGAACAATTCTGCAGAGTGGTGAAGTTCACTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp TGGGGAGGGCATGCAGAATGGGCCCCCAGGAGGCCAGAGATACTAGTTTCTTGGTTCCAAAGTGGAGGATaGGGCCTTCTGAGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: WGGHAEWAPRRPEILVSWFQSGG*GLLRVD
Trigger: GTCAACCCTCAGAAGGCCTCATCCTCCACTTTGGAA...CCAAGAAACTAGTATCTCTGGCCTCCTGGGGGCCCATTCTGCATGCCCTCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp TGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCAGTTCCTACTGCCTCTGTaGGACACAGCAAACCTGGAG +
Preference number: 4 (lower is better)
Translates to: WRKAYIQRIGRAVSTGRQFLLPL*DTANLE
Trigger: CTCCAGGTTTGCTGTGTCTCACAGAGGCAGTAGGAA...CTGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp GGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCGTGCAGTCAGGCTGGTaGCCTGGACCCCATTTGTGT +
Preference number: 4 (lower is better)
Translates to: GQSFIWRKAYIQRIGRAVVQSGW*PGPHLC
Trigger: ACACAAATGGGGTCCAGGTCACCAGCCTGACTGCAC...GACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp TGGGGAGGGCATGCAGAATGGGCCCCCAGGAGGCCAGAGATACTAGTTTCTTGGATGCTTCTAAGTCTCTaGATCGGGGGAAGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: WGGHAEWAPRRPEILVSWMLLSL*IGGSGE
Trigger: CTCCCCACTTCCCCCGATTCAGAGACTTAGAAGCAT...CCAAGAAACTAGTATCTCTGGCCTCCTGGGGGCCCATTCTGCATGCCCTCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp GGCTGGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATTCTGACTCAGAACCCTaGGAGAAAAAGCTGGTATCT +
Preference number: 4 (lower is better)
Translates to: GWAREPTEGQSFIWRKAYSDSEP*EKKLVS
Trigger: AGATACCAGCTTTTTCTCTCAGGGTTCTGAGTCAGA...ATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp GGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACTTGGATGGTGTCCTCTaGCTCAGAACCCTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: GPGSPLRAKASSGGRPIYLDGVL*LRTLRE
Trigger: TTCTCTCAGGGTTCTGAGTCAGAGGACACCATCCAA...GTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp TTACAGTTCCCAAGCCTGCAGGGTGGATGGTGCCATCCAAGGAGAAATAGCGGTCCCAACTCTGGGCCCTaGCTGCAGGTCATTCAGGTC +
Preference number: 4 (lower is better)
Translates to: LQFPSLQGGWCHPRRNSGPNSGP*LQVIQV
Trigger: GACCTGAATGACCTGCAGTCAGGGCCCAGAGTTGGG...ACCGCTATTTCTCCTTGGATGGCACCATCCACCCTGCAGGCTTGGGAACTGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp AGAACCTTTATGCACTCTCTCCCACCTAGACCGAGAAGTGTGCAGCAGCCGTACGATACTGCACCCTCCTaGCCGAGCAGTCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: RTFMHSLPPRPRSVQQPYDTAPS*PSSQAS
Trigger: GGAAGCCTGACTGCTCGGTCAGGAGGGTGCAGTATC...GTACGGCTGCTGCACACTTCTCGGTCTAGGTGGGAGAGAGTGCATAAAGGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTTCTTCTTCTGCTTCTaGTCCAGCAGGGCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GQSFIWRKAYIQRIGRAVFFFCF*SSRARC
Trigger: GCAGCGGGCCCTGCTGGAGCAGAAGCAGAAGAAGAA...GACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp ATTCCCTCCCAAGAACCTACATGGTTACCAACCATGACTTGGCTGACAGCAGTGCCGGGGCCGCCCATCTaGATTGGCCTGCACCATCAG +
Preference number: 4 (lower is better)
Translates to: IPSQEPTWLPTMTWLTAVPGPPI*IGLHHQ
Trigger: CTGATGGTGCAGGCCAATGCAGATGGGCGGCCCCGG...CACTGCTGTCAGCCAAGTCATGGTTGGTAACCATGTAGGTTCTTGGGAGGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCCTGCTGGCCCGCTGGTaGCTTTGTGCTTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GQSFIWRKAYIQRIGRAVLLARW*LCAFPS
Trigger: AGAAGGGAAAGCACAAAGGCACCAGCGGGCCAGCAG...GACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp TTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAGAGAAGGGAAGGCCAGTGGTCTTCTGCCAGTGCTaGTGGCCCGCTGGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: LTQGCRSWGKELEKGRPVVFCQC*WPAGAF
Trigger: AAAGGCACCAGCGGGCCAGCAGCACTGGCAGAAGAC...CACTGGCCTTCCCTTCTCTAATTCCTTACCCCAGCTGCGGCATCCCTGTGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCCCCACAGTCAGAATCTaGACTGGGCCTTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GQSFIWRKAYIQRIGRAVPTVRI*TGPWAS
Trigger: TGAGGCCCAAGGCCCAGTGCAGATTCTGACTGTGGG...GACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp CCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGATCATGCTGCTGGAGATaGCCTTCCTCTGCATCGTGG +
Preference number: 4 (lower is better)
Translates to: PGSPLRAKASSGGRPIYRSCCWR*PSSASW
Trigger: CCACGATGCAGAGGAAGGGCATCTCCAGCAGCATGA...TCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp CAGAGATGTACGGCCGAGGTGTGGGCAGATCCTGCTAGGACAGGTATGCCTTGCCGTCAAAGCTCATGCTaGTGGAGATGCCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: QRCTAEVWADPARTGMPCRQSSC*WRCPSS
Trigger: AGAGGAAGGGCATCTCCAGCAGCATGAGCTTTGACG...GCAAGGCATACCTGTCCTAGCAGGATCTGCCCACACCTCGGCCGTACATCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGTCAACGTCCACTGGTTaGTCTGGAGCTGTTGGGCTA +
Preference number: 4 (lower is better)
Translates to: AREPTEGQSFIWRKAYIQSTSTG*SGAVGL
Trigger: TAGCCCAACAGCTCCAGAGCAACCAGTGGACGTTGA...CTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp AGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGGGGCCGGCCTCAGTaGAAACTCCTCAAGATCCTG +
Preference number: 4 (lower is better)
Translates to: SFIWRKAYIQRIGRAVSTGGRPQ*KLLKIL
Trigger: CAGGATCTTGAGGAGTTTGCACTGAGGCCGGCCCCC...TGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp CATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGAGTAGGTGGGGTACATaGCCCGGTCCATCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: HLAEGLYTEDRQGCLHRQSRWGT*PGPSLS
Trigger: AGAAAGGGATGGACCGGGGCATGTACCCCACCTACT...CTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp GGCTGGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATACAGGTGTCTTGTTTTaGAGCTCGATGATACTCTCC +
Preference number: 4 (lower is better)
Translates to: GWAREPTEGQSFIWRKAYTGVLF*SSMILS
Trigger: GGAGAGTATCATCGAGCTGCAAAACAAGACACCTGT...ATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp GCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGGGTGAACACATCCTCTaGTACCCGGCCAAACTGCAT +
Preference number: 4 (lower is better)
Translates to: AREPTEGQSFIWRKAYIQGEHIL*YPAKLH
Trigger: ATGCAGTTTGGCCGGGTAGCAGAGGATGTGTTCACC...CTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp CCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGCAGCCCTGCAGTGTaGTTCCTCTCCCTCTATGCC +
Preference number: 4 (lower is better)
Translates to: PTEGQSFIWRKAYIQRIGSSPAV*FLSLYA
Trigger: GGCATAGAGGGAGAGGAAGCACACTGCAGGGCTGCT...GCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp TCACCCTGTCCCATTCCCTCCCAAGAACCTACATGGTTACCAACCATGACTTGGGGGCCACAGCAGCCCTaGAGTGTGCTTCCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SPCPIPSQEPTWLPTMTWGPQQP*SVLPLP
Trigger: AGGGAGAGGAAGCACACTGCAGGGCTGCTGTGGCCC...CCAAGTCATGGTTGGTAACCATGTAGGTTCTTGGGAGGGAATGGGACAGGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCATGCTGGAGTACCCATTaGCATCTGACTCCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: LAEGLYTEDRQGCLHRQACWSTH*HLTPWL
Trigger: CAGCCAAGGAGTCAGATGGCAATGGGTACTCCAGCA...TGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CTGAGCGGACGACTGGGCCACAGCAGCCCTGCAGTGTGCTTCCTCTCCCTCTATGGCCACCAAGCCCTTTaGTACATAAAGTTGATGTGG +
Preference number: 4 (lower is better)
Translates to: LSGRLGHSSPAVCFLSLYGHQAL*YIKLMW
Trigger: CCACATCAACTTTATGTAGCAAAGGGCTTGGTGGCC...ATAGAGGGAGAGGAAGCACACTGCAGGGCTGCTGTGGCCCAGTCGTCCGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCGCTGAGCCTGTGTCTTaGAGGGCCCATCCACCAAGA +
Preference number: 4 (lower is better)
Translates to: GQSFIWRKAYIQRIGRAVAEPVS*RAHPPR
Trigger: TCTTGGTGGATGGGCCCTGCAAGACACAGGCTCAGC...GACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCGTTTCCTGGGGGTTGTaGTGGGCTGCTCAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: PTEGQSFIWRKAYIQRIGVSWGL*WAAQQR
Trigger: TCTCTGCTGAGCAGCCCAGCACAACCCCCAGGAAAC...GCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCGCATGCCTAGCTGTGTaGAGTCAGGCTGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: GQSFIWRKAYIQRIGRAVACLAV*SQAGDL
Trigger: CAGGTCACCAGCCTGACTGCACACAGCTAGGCATGC...GACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp TGGGGAGGGCATGCAGAATGGGCCCCCAGGAGGCCAGAGATACTAGTTTCTTGGAGCCGTACTAAGGCCTaGTTACTGCTGAGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: WGGHAEWAPRRPEILVSWSRTKA*LLLSSP
Trigger: AGGGCTACTCAGCAGTAAGCAGGCCTTAGTACGGCT...CCAAGAAACTAGTATCTCTGGCCTCCTGGGGGCCCATTCTGCATGCCCTCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCAGCCCCAGAACCTTTATaGACTCTCTCCCACCTAGAC +
Preference number: 4 (lower is better)
Translates to: LAEGLYTEDRQGCLHRQAAPEPL*TLSHLD
Trigger: GTCTAGGTGGGAGAGAGTGCATAAAGGTTCTGGGGC...TGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACCCAACTCCCTCTTTGTaGTACAGGAGAAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GPGSPLRAKASSGGRPIYPTPSL*YRRKQR
Trigger: CCTCTGCTTTCTCCTGTAGCACAAAGAGGGAGTTGG...GTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CAGGATTCCCAGGCATGCCTAGCTGTGTGCAGTCAGGCTGGTGACCTGGACCCCCGGTTACAGAGAAGCTaGCTAAACTCACTCCCAACT +
Preference number: 4 (lower is better)
Translates to: QDSQACLAVCSQAGDLDPRLQRS*LNSLPT
Trigger: AGTTGGGAGTGAGTTTAGGCAGCTTCTCTGTAACCG...GGGGTCCAGGTCACCAGCCTGACTGCACACAGCTAGGCATGCCTGGGAATCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCCCAGCAAGAGATACTaGACCCTCCTGACCGAGCAG +
Preference number: 4 (lower is better)
Translates to: GPKLHLAEGLYTEDRQGCPSKRY*TLLTEQ
Trigger: CTGCTCGGTCAGGAGGGTGCAGTATCTCTTGCTGGG...ACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAGAGAAGGGAAGGCCAGTGCTCCCAGCTGCACACTaGCGAGTGAGTCGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: LTQGCRSWGKELEKGRPVLPAAH*RVSRPL
Trigger: AAGAGGCCGACTCACTCGCCAGTGTGCAGCTGGGAG...CACTGGCCTTCCCTTCTCTAATTCCTTACCCCAGCTGCGGCATCCCTGTGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp AGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACACTCCCAGCTGCACACTaGCGAGTGAGTCGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: SFIWRKAYIQRIGRAVSTLPAAH*RVSRPL
Trigger: AAGAGGCCGACTCACTCGCCAGTGTGCAGCTGGGAG...TGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp GCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGTCAGAATCTGCACTaGGCCTTGGGCCTCAGACTT +
Preference number: 4 (lower is better)
Translates to: AREPTEGQSFIWRKAYIQSQNLH*ALGLRL
Trigger: AAGTCTGAGGCCCAAGGCCCAGTGCAGATTCTGACT...CTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp GGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTTGGGCGTGGTCTGACTaGCCCACAGTCAGAATCTGC +
Preference number: 4 (lower is better)
Translates to: GPKLHLAEGLYTEDRQGCWAWSD*PTVRIC
Trigger: GCAGATTCTGACTGTGGGCCAGTCAGACCACGCCCA...ACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp GCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGCAAAGCTCATGCTGCTaGAGATGCCCTTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: AREPTEGQSFIWRKAYIQQSSCC*RCPSSA
Trigger: TGCAGAGGAAGGGCATCTCCAGCAGCATGAGCTTTG...CTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp GGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACTTAGCTGGGAGGAGCTaGAGCTATTCTCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: GPGSPLRAKASSGGRPIYLAGRS*SYSPPH
Trigger: ATGAGGAGGAGAATAGCTCCAGCTCCTCCCAGCTAA...GTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp TTACAGTTCCCAAGCCTGCAGGGTGGATGGTGCCATCCAAGGAGAAATAGCGGTTTGATGGTGATACCCTaGGGGGCCGGCCTCAGTGCA +
Preference number: 4 (lower is better)
Translates to: LQFPSLQGGWCHPRRNSGLMVIP*GAGLSA
Trigger: TGCACTGAGGCCGGCCCCCCAGGGTATCACCATCAA...ACCGCTATTTCTCCTTGGATGGCACCATCCACCCTGCAGGCTTGGGAACTGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp AGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACATTGATGGTGATACCCTaGGGGGCCGGCCTCAGTGCA +
Preference number: 4 (lower is better)
Translates to: SFIWRKAYIQRIGRAVSTLMVIP*GAGLSA
Trigger: TGCACTGAGGCCGGCCCCCCAGGGTATCACCATCAA...TGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp CACCTAGACCGAGAAGTGTGCAGCAGCCGTACTAAGGCCTGCTTACTGCTGAGTGACAGCCCTGAGAGCTaGGTTCCTACTGCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: HLDREVCSSRTKACLLLSDSPES*VPTASV
Trigger: CACAGAGGCAGTAGGAACCCAGCTCTCAGGGCTGTC...ACTCAGCAGTAAGCAGGCCTTAGTACGGCTGCTGCACACTTCTCGGTCTAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp AAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACTCCTGGGGGTTGTGCTaGGCTGCTCAGCAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: KLHLAEGLYTEDRQGCLHSWGLC*AAQQRA
Trigger: AGCTCTCTGCTGAGCAGCCCAGCACAACCCCCAGGA...GTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TGGGGAGGGCATGCAGAATGGGCCCCCAGGAGGCCAGAGATACTAGTTTCTTGGGTCAGGCTGGTGACCTaGACCCCATTTGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: WGGHAEWAPRRPEILVSWVRLVT*TPFVFP
Trigger: AGGAAACACAAATGGGGTCCAGGTCACCAGCCTGAC...CCAAGAAACTAGTATCTCTGGCCTCCTGGGGGCCCATTCTGCATGCCCTCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACATAAAGTTGGAGGGCATGCAGAATaGGCCCCCAGGAGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LQLFKGQAWPPSPLLHKVGGHAE*APRRPE
Trigger: CTCTGGCCTCCTGGGGGCCCATTCTGCATGCCCTCC...AACTTTATGTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CACCTAGACCGAGAAGTGTGCAGCAGCCGTACTAAGGCCTGCTTACTGCTGAGTCTGAATCGGGGGAAGTaGGGAGGGCATGCAGAATGG +
Preference number: 4 (lower is better)
Translates to: HLDREVCSSRTKACLLLSLNRGK*GGHAEW
Trigger: CCATTCTGCATGCCCTCCCCACTTCCCCCGATTCAG...ACTCAGCAGTAAGCAGGCCTTAGTACGGCTGCTGCACACTTCTCGGTCTAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCAACAGAGCCATGGAAATaGCTATCCCAGCATCTCCCC +
Preference number: 4 (lower is better)
Translates to: LAEGLYTEDRQGCLHRQATEPWK*LSQHLP
Trigger: GGGGAGATGCTGGGATAGCCATTTCCATGGCTCTGT...TGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGCAAGAGCCTAGCCCTTaGCTTATTACCGGTGGCTAC +
Preference number: 4 (lower is better)
Translates to: AREPTEGQSFIWRKAYIQQEPSP*LITGGY
Trigger: GTAGCCACCGGTAATAAGCCAAGGGCTAGGCTCTTG...CTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CACCTAGACCGAGAAGTGTGCAGCAGCCGTACTAAGGCCTGCTTACTGCTGAGTATCTCCAGCTTTGCCTaGACCTTGCTAGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: HLDREVCSSRTKACLLLSISSFA*TLLGGG
Trigger: CCCTCCCCCTAGCAAGGTCCAGGCAAAGCTGGAGAT...ACTCAGCAGTAAGCAGGCCTTAGTACGGCTGCTGCACACTTCTCGGTCTAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp ATTCCCTCCCAAGAACCTACATGGTTACCAACCATGACTTGGCTGACAGCAGTGTGCTGCCACTGCTGCTaGGGTAGGACTCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: IPSQEPTWLPTMTWLTAVCCHCC*GRTPPG
Trigger: CCCTGGTGGAGTCCTACCTCAGCAGCAGTGGCAGCA...CACTGCTGTCAGCCAAGTCATGGTTGGTAACCATGTAGGTTCTTGGGAGGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp TTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAGAGAAGGGAAGGCCAGTGCTGCACACTGGCGAGTaGGTCGGCCTCTTGAACTTG +
Preference number: 4 (lower is better)
Translates to: LTQGCRSWGKELEKGRPVLHTGE*VGLLNL
Trigger: CAAGTTCAAGAGGCCGACTCACTCGCCAGTGTGCAG...CACTGGCCTTCCCTTCTCTAATTCCTTACCCCAGCTGCGGCATCCCTGTGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp AGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACACTTGGTTCTCTTGGCTaGAGCTGGTGCTGTTGGGCG +
Preference number: 4 (lower is better)
Translates to: SFIWRKAYIQRIGRAVSTLGSLG*SWCCWA
Trigger: CGCCCAACAGCACCAGCTTCAGCCAAGAGAACCAAG...TGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR TCA 90 bp AGGGCTTTCTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACACAGCTGCCAGCTCCTaGCGTAAGGTTCCACTTTCC +
Preference number: 4 (lower is better)
Translates to: RAFCSCLRARLGHQALCYTAASS*RKVPLS
Trigger: GGAAAGTGGAACCTTACGTCAGGAGCTGGCAGCTGT...GTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAGAAAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp GCCCCTACCTGCTGGAGTACCCATTGCCATCTGACTCCTTGGCTGAGCGGACGAATAGAGACTCTCTCATaGACCATGTTCATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: APTCWSTHCHLTPWLSGRIETLS*TMFMPG
Trigger: CCCAGGCATGAACATGGTTCATGAGAGAGTCTCTAT...TCGTCCGCTCAGCCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp GGCTGGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATTGTTTTGCAGCTCGATaGTACTCTCCGTGTTCTTAT +
Preference number: 4 (lower is better)
Translates to: GWAREPTEGQSFIWRKAYCFAAR*YSPCSY
Trigger: ATAAGAACACGGAGAGTATCATCGAGCTGCAAAACA...ATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR TCA 90 bp GCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGGGTCATTGCCATGGATaGTCTGGAAGTTCTTCACGG +
Preference number: 4 (lower is better)
Translates to: AREPTEGQSFIWRKAYIQGHCHG*SGSSSR
Trigger: CCGTGAAGAACTTCCAGATCATCCATGGCAATGACC...CTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR TCA 90 bp AAGCAAGGTACGACCCCTGCTTGCTTCCCACCAATTTCAGATCTCTATCTGGGCCCACCAAGACAGCCCTaGGAGCTGGGTTCCTACTGC +
Preference number: 4 (lower is better)
Translates to: KQGTTPACFPPISDLYLGPPRQP*ELGSYC
Trigger: GCAGTAGGAACCCAGCTCTCAGGGCTGTCTTGGTGG...GCCCAGATAGAGATCTGAAATTGGTGGGAAGCAAGCAGGGGTCGTACCTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp GGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCCAGAACAACCCTaGTCCAGGGACCCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: GPKLHLAEGLYTEDRQGCLPEQP*SRDPVH
Trigger: ATGAACAGGGTCCCTGGATCAGGGTTGTTCTGGGAG...ACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp CTGAGCGGACGACTGGGCCACAGCAGCCCTGCAGTGTGCTTCCTCTCCCTCTATCTCCACCAGGGTAAATaGCAAATGAGCAAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: LSGRLGHSSPAVCFLSLYLHQGK*QMSKSL
Trigger: CAAGCTTTTGCTCATTTGTCATTTACCCTGGTGGAG...ATAGAGGGAGAGGAAGCACACTGCAGGGCTGCTGTGGCCCAGTCGTCCGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp TCACCCTGTCCCATTCCCTCCCAAGAACCTACATGGTTACCAACCATGACTTGGGATACTGCACCCTCCTaGCCGAGCAGTCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SPCPIPSQEPTWLPTMTWDTAPS*PSSQAS
Trigger: GGAAGCCTGACTGCTCGGTCAGGAGGGTGCAGTATC...CCAAGTCATGGTTGGTAACCATGTAGGTTCTTGGGAGGGAATGGGACAGGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CACATTCACTGTGCCCCTACCTGCTGGAGTACCCATTGCCATCTGACTCCTTGGTGCCGATCAAGCTTCTaGTGCCTCAGGTTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: HIHCAPTCWSTHCHLTPWCRSSF*CLRFLP
Trigger: GGGCAGAAACCTGAGGCAGCAGAAGCTTGATCGGCA...CCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGCACAGTGAATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTGCCGATCAAGCTTCTaGTGCCTCAGGTTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: GQSFIWRKAYIQRIGRAVCRSSF*CLRFLP
Trigger: GGGCAGAAACCTGAGGCAGCAGAAGCTTGATCGGCA...GACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp CACCTAGACCGAGAAGTGTGCAGCAGCCGTACTAAGGCCTGCTTACTGCTGAGTTCATGCTGCTGGAGATaGCCTTCCTCTGCATCGTGG +
Preference number: 4 (lower is better)
Translates to: HLDREVCSSRTKACLLLSSCCWR*PSSASW
Trigger: CCACGATGCAGAGGAAGGGCATCTCCAGCAGCATGA...ACTCAGCAGTAAGCAGGCCTTAGTACGGCTGCTGCACACTTCTCGGTCTAGGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GACGCACAGACACACACATACACAGACGGACACAGAGCACCTTGGAGCCAGAAGCCTCGTCAAAGCTCATaGTGCTGGAGATGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: DAQTHTYTDGHRAPWSQKPRQSS*CWRCPS
Trigger: GGAAGGGCATCTCCAGCAGCATGAGCTTTGACGAGG...CTTCTGGCTCCAAGGTGCTCTGTGTCCGTCTGTGTATGTGTGTGTCTGTGCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACCATGAACCATGTTCATaGCTGGGACAATCACGCTCA +
Preference number: 4 (lower is better)
Translates to: GPGSPLRAKASSGGRPIYHEPCS*LGQSRS
Trigger: TGAGCGTGATTGTCCCAGGCATGAACATGGTTCATG...GTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp CTGAGCGGACGACTGGGCCACAGCAGCCCTGCAGTGTGCTTCCTCTCCCTCTATACAGGTGTCTTGTTTTaGAGCTCGATGATACTCTCC +
Preference number: 4 (lower is better)
Translates to: LSGRLGHSSPAVCFLSLYTGVLF*SSMILS
Trigger: GGAGAGTATCATCGAGCTGCAAAACAAGACACCTGT...ATAGAGGGAGAGGAAGCACACTGCAGGGCTGCTGTGGCCCAGTCGTCCGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCCACTGTGCCCCTACCTaGTGGAGTACCCATTGCCAT +
Preference number: 4 (lower is better)
Translates to: GQSFIWRKAYIQRIGRAVHCAPT*WSTHCH
Trigger: ATGGCAATGGGTACTCCAGCAGGTAGGGGCACAGTG...GACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp AGAACCTTTATGCACTCTCTCCCACCTAGACCGAGAAGTGTGCAGCAGCCGTACGCTGAGCCTGTGTCTTaGAGGGCCCATCCACCAAGA +
Preference number: 4 (lower is better)
Translates to: RTFMHSLPPRPRSVQQPYAEPVS*RAHPPR
Trigger: TCTTGGTGGATGGGCCCTGCAAGACACAGGCTCAGC...GTACGGCTGCTGCACACTTCTCGGTCTAGGTGGGAGAGAGTGCATAAAGGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GGGGAAGTGAACTTCACCACTCTGCAGAATTGTTCTGGGGCAGAGGGTGTAGAGGCATGCCTAGCTGTGTaGAGTCAGGCTGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: GEVNFTTLQNCSGAEGVEACLAV*SQAGDL
Trigger: CAGGTCACCAGCCTGACTGCACACAGCTAGGCATGC...CTCTACACCCTCTGCCCCAGAACAATTCTGCAGAGTGGTGAAGTTCACTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp AGGGCTTTCTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACCTAGACCGAGAAGTGTaGAGCAGCCGTACTAAGGCC +
Preference number: 4 (lower is better)
Translates to: RAFCSCLRARLGHQALCYLDREV*SSRTKA
Trigger: GGCCTTAGTACGGCTGCTGCACACTTCTCGGTCTAG...GTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAGAAAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCCTAGACCGAGAAGTGTaGAGCAGCCGTACTAAGGCC +
Preference number: 4 (lower is better)
Translates to: PTEGQSFIWRKAYIQRIGLDREV*SSRTKA
Trigger: GGCCTTAGTACGGCTGCTGCACACTTCTCGGTCTAG...GCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGCCCCAGAACCTTTATaGACTCTCTCCCACCTAGAC +
Preference number: 4 (lower is better)
Translates to: PGSPLRAKASSGGRPIYRAPEPL*TLSHLD
Trigger: GTCTAGGTGGGAGAGAGTGCATAAAGGTTCTGGGGC...TCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CACCTAGACCGAGAAGTGTGCAGCAGCCGTACTAAGGCCTGCTTACTGCTGAGTTACAGTTCCCAAGCCTaGAGGGTGGATGGTGCCATC +
Preference number: 4 (lower is better)
Translates to: HLDREVCSSRTKACLLLSYSSQA*RVDGAI
Trigger: GATGGCACCATCCACCCTGCAGGCTTGGGAACTGTA...ACTCAGCAGTAAGCAGGCCTTAGTACGGCTGCTGCACACTTCTCGGTCTAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp TGGGGAGGGCATGCAGAATGGGCCCCCAGGAGGCCAGAGATACTAGTTTCTTGGGGTACGACCCCTGCTTaGTTCCCACCAATTTCAGAT +
Preference number: 4 (lower is better)
Translates to: WGGHAEWAPRRPEILVSWGTTPA*FPPISD
Trigger: ATCTGAAATTGGTGGGAAGCAAGCAGGGGTCGTACC...CCAAGAAACTAGTATCTCTGGCCTCCTGGGGGCCCATTCTGCATGCCCTCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GCCCCTACCTGCTGGAGTACCCATTGCCATCTGACTCCTTGGCTGAGCGGACGAAGCATCTCCCCTCACTaGAGACTCCATTGTAAGCAA +
Preference number: 4 (lower is better)
Translates to: APTCWSTHCHLTPWLSGRSISPH*RLHCKQ
Trigger: TTGCTTACAATGGAGTCTGCAGTGAGGGGAGATGCT...TCGTCCGCTCAGCCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GACGCACAGACACACACATACACAGACGGACACAGAGCACCTTGGAGCCAGAAGAGTCGGAATGCGGCTTaGAAGTCATGTCTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: DAQTHTYTDGHRAPWSQKSRNAA*KSCLSG
Trigger: CCCCGAGAGACATGACTTCCAAGCCGCATTCCGACT...CTTCTGGCTCCAAGGTGCTCTGTGTCCGTCTGTGTATGTGTGTGTCTGTGCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299506.3
CDS-3UTR CCA 90 bp AGGGCTTTCTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACACCATCAGGGGCTCCTaGCGCTTCTTCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RAFCSCLRARLGHQALCYTIRGS*RFFFCF
Trigger: GAAGCAGAAGAAGAAGCGCCAGGAGCCCCTGATGGT...GTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAGAAAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CAGAGATGTACGGCCGAGGTGTGGGCAGATCCTGCTAGGACAGGTATGCCTTGCTTAGCTGGGAGGAGCTaGAGCTATTCTCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: QRCTAEVWADPARTGMPCLAGRS*SYSPPH
Trigger: ATGAGGAGGAGAATAGCTCCAGCTCCTCCCAGCTAA...GCAAGGCATACCTGTCCTAGCAGGATCTGCCCACACCTCGGCCGTACATCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CACATTCACTGTGCCCCTACCTGCTGGAGTACCCATTGCCATCTGACTCCTTGGGACCTCAACGTCCACTaGTTGCTCTGGAGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: HIHCAPTCWSTHCHLTPWDLNVH*LLWSCW
Trigger: CCAACAGCTCCAGAGCAACCAGTGGACGTTGAGGTC...CCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGCACAGTGAATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GACGCACAGACACACACATACACAGACGGACACAGAGCACCTTGGAGCCAGAAGGACCTCAACGTCCACTaGTTGCTCTGGAGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: DAQTHTYTDGHRAPWSQKDLNVH*LLWSCW
Trigger: CCAACAGCTCCAGAGCAACCAGTGGACGTTGAGGTC...CTTCTGGCTCCAAGGTGCTCTGTGTCCGTCTGTGTATGTGTGTGTCTGTGCGTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCGACCTCAACGTCCACTaGTTGCTCTGGAGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: FIWRKAYIQRIGRAVSTGDLNVH*LLWSCW
Trigger: CCAACAGCTCCAGAGCAACCAGTGGACGTTGAGGTC...GCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp AAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACGGTGCAGAAAGTAGGTaGGGTACATGCCCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: KLHLAEGLYTEDRQGCLHGAESR*GTCPGP
Trigger: TGGACCGGGGCATGTACCCCACCTACTTTCTGCACC...GTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp CAGAGATGTACGGCCGAGGTGTGGGCAGATCCTGCTAGGACAGGTATGCCTTGCTTGCCATGGATGATCTaGAAGTTCTTCACGGAGGCC +
Preference number: 4 (lower is better)
Translates to: QRCTAEVWADPARTGMPCLPWMI*KFFTEA
Trigger: GGCCTCCGTGAAGAACTTCCAGATCATCCATGGCAA...GCAAGGCATACCTGTCCTAGCAGGATCTGCCCACACCTCGGCCGTACATCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCGCTTGCTGTCGAAGCTaGACAGGGCAATGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: FIWRKAYIQRIGRAVSTGACCRS*TGQWQR
Trigger: CCTTTGCCATTGCCCTGTCCAGCTTCGACAGCAAGC...GCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp CAGAGATGTACGGCCGAGGTGTGGGCAGATCCTGCTAGGACAGGTATGCCTTGCGGCCAAAGCTTCATCTaGCGGAAGGCCTATATACAG +
Preference number: 4 (lower is better)
Translates to: QRCTAEVWADPARTGMPCGQSFI*RKAYIQ
Trigger: CTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCC...GCAAGGCATACCTGTCCTAGCAGGATCTGCCCACACCTCGGCCGTACATCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp AGGGCTTTCTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACTGTGCCCCTACCTGCTaGAGTACCCATTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: RAFCSCLRARLGHQALCYCAPTC*STHCHL
Trigger: CAGATGGCAATGGGTACTCCAGCAGGTAGGGGCACA...GTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAGAAAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGATTGGGAATGGTTCTCTaGCAGCAGGATTCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: PGSPLRAKASSGGRPIYRLGMVL*QQDSQA
Trigger: TGCCTGGGAATCCTGCTGCCAGAGAACCATTCCCAA...TCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp AGGGCTTTCTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACGAGCATGCCATGGCTTaGGAATGGTTCTCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: RAFCSCLRARLGHQALCYEHAMA*EWFSGS
Trigger: GCTGCCAGAGAACCATTCCCAAGCCATGGCATGCTC...GTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAGAAAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp AGAACCTTTATGCACTCTCTCCCACCTAGACCGAGAAGTGTGCAGCAGCCGTACTGTACGGCCGAGGTGTaGGCAGATCCTGCTAGGACA +
Preference number: 4 (lower is better)
Translates to: RTFMHSLPPRPRSVQQPYCTAEV*ADPART
Trigger: TGTCCTAGCAGGATCTGCCCACACCTCGGCCGTACA...GTACGGCTGCTGCACACTTCTCGGTCTAGGTGGGAGAGAGTGCATAAAGGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCAGCAAAAGCTAATCGTTaGAGGGGGTCTCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: LAEGLYTEDRQGCLHRQAAKANR*RGSLTE
Trigger: CTCTGTGAGAGACCCCCTCCAACGATTAGCTTTTGC...TGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CACCTAGACCGAGAAGTGTGCAGCAGCCGTACTAAGGCCTGCTTACTGCTGAGTGTATCTCGCCAGCGCTaGCACAAAGTTCTAGTGCCC +
Preference number: 4 (lower is better)
Translates to: HLDREVCSSRTKACLLLSVSRQR*HKVLVP
Trigger: GGGCACTAGAACTTTGTGCCAGCGCTGGCGAGATAC...ACTCAGCAGTAAGCAGGCCTTAGTACGGCTGCTGCACACTTCTCGGTCTAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TCACCCTGTCCCATTCCCTCCCAAGAACCTACATGGTTACCAACCATGACTTGGAGGAGGATGGCACCATaGTATCTCGCCAGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: SPCPIPSQEPTWLPTMTWRRMAP*YLASAG
Trigger: GCCAGCGCTGGCGAGATACCATGGTGCCATCCTCCT...CCAAGTCATGGTTGGTAACCATGTAGGTTCTTGGGAGGGAATGGGACAGGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp AAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACGAGGCTGAACCCAGGTaGTTTCTAGGGGCCCTAGCA +
Preference number: 4 (lower is better)
Translates to: KLHLAEGLYTEDRQGCLHEAEPR*FLGALA
Trigger: TGCTAGGGCCCCTAGAAACCACCTGGGTTCAGCCTC...GTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp AGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGAGGGTGTAGAGTTTTaGGGTGTGGCCCCAGAAGCG +
Preference number: 4 (lower is better)
Translates to: SFIWRKAYIQRIGRAVSTEGVEF*GVAPEA
Trigger: CGCTTCTGGGGCCACACCCCAAAACTCTACACCCTC...TGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACGACTTGGAGAAGAGTTaGGGAAGTGAACTTCACCAC +
Preference number: 4 (lower is better)
Translates to: GPGSPLRAKASSGGRPIYDLEKS*GSELHH
Trigger: GTGGTGAAGTTCACTTCCCCAACTCTTCTCCAAGTC...GTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCCCAGGGAGTGCCTCCTaGGAACAAAATCCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: GQSFIWRKAYIQRIGRAVPGSAS*EQNPCL
Trigger: GAGACAGGGATTTTGTTCCCAGGAGGCACTCCCTGG...GACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305253.8
CDS-3UTR TCA 90 bp CTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACATAAAGTTGTCCTGGGCGTGGTCTaGCTGGCCCACAGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: LQLFKGQAWPPSPLLHKVVLGVV*LAHSQN
Trigger: ATTCTGACTGTGGGCCAGTCAGACCACGCCCAGGAC...AACTTTATGTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp CCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCTTCCAAAGTGGAGGATaGGGCCTTCTGAGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: PTEGQSFIWRKAYIQRIGFQSGG*GLLRVD
Trigger: GTCAACCCTCAGAAGGCCTCATCCTCCACTTTGGAA...GCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR TCA 90 bp GGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTTTCCAAAGTGGAGGATaGGGCCTTCTGAGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: GPKLHLAEGLYTEDRQGCFQSGG*GLLRVD
Trigger: GTCAACCCTCAGAAGGCCTCATCCTCCACTTTGGAA...ACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR TCA 90 bp TTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCTCTTCCGAGGCCCCTTaGAGCCTAAGACGTTTGTCT +
Preference number: 4 (lower is better)
Translates to: FIWRKAYIQRIGRAVSTGSSEAP*SLRRLS
Trigger: AGACAAACGTCTTAGGCTTCAAGGGGCCTCGGAAGA...GCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR TCA 90 bp TGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCAGATAGAGACTCTCTCATaGACCATGTTCATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: WRKAYIQRIGRAVSTGRQIETLS*TMFMPG
Trigger: CCCAGGCATGAACATGGTTCATGAGAGAGTCTCTAT...CTGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR TCA 90 bp GCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGTTGTAATCCATGGTaGACACATCCTCTGCTACCC +
Preference number: 4 (lower is better)
Translates to: AREPTEGQSFIWRKAYIQSCNPW*THPLLP
Trigger: GGGTAGCAGAGGATGTGTTCACCATGGATTACAACT...CTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR TCA 90 bp GACGCACAGACACACACATACACAGACGGACACAGAGCACCTTGGAGCCAGAAGGGTGGGAGTGTGTGTTaGTCTCGTGGCATGGAAAGA +
Preference number: 4 (lower is better)
Translates to: DAQTHTYTDGHRAPWSQKGGSVC*SRGMER
Trigger: TCTTTCCATGCCACGAGATCAACACACACTCCCACC...CTTCTGGCTCCAAGGTGCTCTGTGTCCGTCTGTGTATGTGTGTGTCTGTGCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp CAGAGATGTACGGCCGAGGTGTGGGCAGATCCTGCTAGGACAGGTATGCCTTGCAACTTCTCTCAGGCTTaGGTGAGGCCTTCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: QRCTAEVWADPARTGMPCNFSQA*VRPSEV
Trigger: AACTTCAGAAGGCCTCACTCAAGCCTGAGAGAAGTT...GCAAGGCATACCTGTCCTAGCAGGATCTGCCCACACCTCGGCCGTACATCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp AAGCAAGGTACGACCCCTGCTTGCTTCCCACCAATTTCAGATCTCTATCTGGGCTGCACTTCTGCATGCTaGGCCTGTGTCTTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: KQGTTPACFPPISDLYLGCTSAC*ACVLQG
Trigger: GCCCTGCAAGACACAGGCTCAGCATGCAGAAGTGCA...GCCCAGATAGAGATCTGAAATTGGTGGGAAGCAAGCAGGGGTCGTACCTTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp GACGCACAGACACACACATACACAGACGGACACAGAGCACCTTGGAGCCAGAAGATGCTTCTAAGTCTCTaGATCGGGGGAAGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: DAQTHTYTDGHRAPWSQKMLLSL*IGGSGE
Trigger: CTCCCCACTTCCCCCGATTCAGAGACTTAGAAGCAT...CTTCTGGCTCCAAGGTGCTCTGTGTCCGTCTGTGTATGTGTGTGTCTGTGCGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp GGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACCTCCACCAGGGTAAATaGCAAATGAGCAAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: GPGSPLRAKASSGGRPIYLHQGK*QMSKSL
Trigger: CAAGCTTTTGCTCATTTGTCATTTACCCTGGTGGAG...GTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp GGCTGGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATTTAAGAAACCTCAGTTaGTTGCTGATTGCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: GWAREPTEGQSFIWRKAYLRNLS*LLIALF
Trigger: GAAAAGGGCAATCAGCAATCAACTGAGGTTTCTTAA...ATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp GACGCACAGACACACACATACACAGACGGACACAGAGCACCTTGGAGCCAGAAGTGGAGAAGTGTAATCTaGGGGCCACTTGGCATCCTG +
Preference number: 4 (lower is better)
Translates to: DAQTHTYTDGHRAPWSQKWRSVI*GPLGIL
Trigger: CAGGATGCCAAGTGGCCCTCAGATTACACTTCTCCA...CTTCTGGCTCCAAGGTGCTCTGTGTCCGTCTGTGTATGTGTGTGTCTGTGCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp GGGGAAGTGAACTTCACCACTCTGCAGAATTGTTCTGGGGCAGAGGGTGTAGAGTGCTGCTTTGAATGCTaGGATCCCATGGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: GEVNFTTLQNCSGAEGVECCFEC*DPMGQG
Trigger: TCCCTGGCCCATGGGATCTCAGCATTCAAAGCAGCA...CTCTACACCCTCTGCCCCAGAACAATTCTGCAGAGTGGTGAAGTTCACTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305253.8
CDS-3UTR GCA 90 bp CATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGGAATCCAGTCGGAATaGGGCTTGGAAGTCATGTCT +
Preference number: 4 (lower is better)
Translates to: HLAEGLYTEDRQGCLHRQGIQSE*GLEVMS
Trigger: AGACATGACTTCCAAGCCGCATTCCGACTGGATTCC...CTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299506.3
CDS-3UTR GCA 90 bp CCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGCTGCCTCAGGTTTCTaGCCTCATCATCTAAGACAC +
Preference number: 4 (lower is better)
Translates to: PGSPLRAKASSGGRPIYRAASGF*PHHLRH
Trigger: GTGTCTTAGATGATGAGGGCAGAAACCTGAGGCAGC...TCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp AAGCAAGGTACGACCCCTGCTTGCTTCCCACCAATTTCAGATCTCTATCTGGGCGAGATGCCCTTCCTCTaGATCGTGGCACGGAGATCC +
Preference number: 4 (lower is better)
Translates to: KQGTTPACFPPISDLYLGEMPFL*IVARRS
Trigger: GGATCTCCGTGCCACGATGCAGAGGAAGGGCATCTC...GCCCAGATAGAGATCTGAAATTGGTGGGAAGCAAGCAGGGGTCGTACCTTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCCGTCAAAGCTCATGCTaGTGGAGATGCCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GQSFIWRKAYIQRIGRAVRQSSC*WRCPSS
Trigger: AGAGGAAGGGCATCTCCAGCAGCATGAGCTTTGACG...GACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp TTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCCGTCAAAGCTCATGCTaGTGGAGATGCCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: FIWRKAYIQRIGRAVSTGRQSSC*WRCPSS
Trigger: AGAGGAAGGGCATCTCCAGCAGCATGAGCTTTGACG...GCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp AAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACCCTCGTCAAAGCTCATaGTGCTGGAGATGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: KLHLAEGLYTEDRQGCLHPRQSS*CWRCPS
Trigger: GGAAGGGCATCTCCAGCAGCATGAGCTTTGACGAGG...GTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp GGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCAACGTCCACTGGTTaGTCTGGAGCTGTTGGGCTA +
Preference number: 4 (lower is better)
Translates to: GQSFIWRKAYIQRIGRAVSTSTG*SGAVGL
Trigger: TAGCCCAACAGCTCCAGAGCAACCAGTGGACGTTGA...GACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp AGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAAGTAGGTGGGGTACATaGCCCGGTCCATCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: SFIWRKAYIQRIGRAVSTSRWGT*PGPSLS
Trigger: AGAAAGGGATGGACCGGGGCATGTACCCCACCTACT...TGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp CACATTCACTGTGCCCCTACCTGCTGGAGTACCCATTGCCATCTGACTCCTTGGGGTGAACACATCCTCTaGTACCCGGCCAAACTGCAT +
Preference number: 4 (lower is better)
Translates to: HIHCAPTCWSTHCHLTPWGEHIL*YPAKLH
Trigger: ATGCAGTTTGGCCGGGTAGCAGAGGATGTGTTCACC...CCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGCACAGTGAATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCTCCACTACTCCCCTaGCTCAGTAGCAGAGGCAAA +
Preference number: 4 (lower is better)
Translates to: GQSFIWRKAYIQRIGRAVSPLLP*LSSRGK
Trigger: TTTGCCTCTGCTACTGAGGCAGGGGAGTAGTGGAGA...GACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp AAGCAAGGTACGACCCCTGCTTGCTTCCCACCAATTTCAGATCTCTATCTGGGCAGCAGCCCTGCAGTGTaGTTCCTCTCCCTCTATGCC +
Preference number: 4 (lower is better)
Translates to: KQGTTPACFPPISDLYLGSSPAV*FLSLYA
Trigger: GGCATAGAGGGAGAGGAAGCACACTGCAGGGCTGCT...GCCCAGATAGAGATCTGAAATTGGTGGGAAGCAAGCAGGGGTCGTACCTTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CACCTAGACCGAGAAGTGTGCAGCAGCCGTACTAAGGCCTGCTTACTGCTGAGTTGCTGGAGTACCCATTaGCATCTGACTCCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: HLDREVCSSRTKACLLLSCWSTH*HLTPWL
Trigger: CAGCCAAGGAGTCAGATGGCAATGGGTACTCCAGCA...ACTCAGCAGTAAGCAGGCCTTAGTACGGCTGCTGCACACTTCTCGGTCTAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGCCGTACTAAGGCCTaGTTACTGCTGAGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: PTEGQSFIWRKAYIQRIGSRTKA*LLLSSP
Trigger: AGGGCTACTCAGCAGTAAGCAGGCCTTAGTACGGCT...GCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCGCAAGGTACGACCCCTaGTTGCTTCCCACCAATTTC +
Preference number: 4 (lower is better)
Translates to: PTEGQSFIWRKAYIQRIGARYDP*LLPTNF
Trigger: GAAATTGGTGGGAAGCAAGCAGGGGTCGTACCTTGC...GCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCGCAAGGTACGACCCCTaGTTGCTTCCCACCAATTTC +
Preference number: 4 (lower is better)
Translates to: GQSFIWRKAYIQRIGRAVARYDP*LLPTNF
Trigger: GAAATTGGTGGGAAGCAAGCAGGGGTCGTACCTTGC...GACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CAGGATTCCCAGGCATGCCTAGCTGTGTGCAGTCAGGCTGGTGACCTGGACCCCCTGCTAGGACAGGTATaGCTTGCTTTAAGCATTCAA +
Preference number: 4 (lower is better)
Translates to: QDSQACLAVCSQAGDLDPLLGQV*LALSIQ
Trigger: TTGAATGCTTAAAGCAAGGCATACCTGTCCTAGCAG...GGGGTCCAGGTCACCAGCCTGACTGCACACAGCTAGGCATGCCTGGGAATCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp TGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCAGCGGTTACAGAGAAGCTaGCTAAACTCACTCCCAACT +
Preference number: 4 (lower is better)
Translates to: WRKAYIQRIGRAVSTGRQRLQRS*LNSLPT
Trigger: AGTTGGGAGTGAGTTTAGGCAGCTTCTCTGTAACCG...CTGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GGCTGGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATCAGTTGATTGCTGATTaGCCTTTTCCCCAAATAAAC +
Preference number: 4 (lower is better)
Translates to: GWAREPTEGQSFIWRKAYQLIAD*PFPQIN
Trigger: GTTTATTTGGGGAAAAGGGCAATCAGCAATCAACTG...ATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp AAGCAAGGTACGACCCCTGCTTGCTTCCCACCAATTTCAGATCTCTATCTGGGCACTCTGGGCCCTGACTaGAGGTCATTCAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: KQGTTPACFPPISDLYLGTLGPD*RSFRSQ
Trigger: CTGGGACCTGAATGACCTGCAGTCAGGGCCCAGAGT...GCCCAGATAGAGATCTGAAATTGGTGGGAAGCAAGCAGGGGTCGTACCTTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp AGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACACCGCCTTGGTTCTCTTaGCTGAAGCTGGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: SFIWRKAYIQRIGRAVSTPPWFS*LKLVLL
Trigger: CAACAGCACCAGCTTCAGCCAAGAGAACCAAGGCGG...TGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp TTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGTCAGAATCTGCACTaGGCCTTGGGCCTCAGACTT +
Preference number: 4 (lower is better)
Translates to: FIWRKAYIQRIGRAVSTGSQNLH*ALGLRL
Trigger: AAGTCTGAGGCCCAAGGCCCAGTGCAGATTCTGACT...GCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp ATTCCCTCCCAAGAACCTACATGGTTACCAACCATGACTTGGCTGACAGCAGTGGTCCACTGGTTGCTCTaGAGCTGTTGGGCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: IPSQEPTWLPTMTWLTAVVHWLL*SCWARG
Trigger: GCCCCTAGCCCAACAGCTCCAGAGCAACCAGTGGAC...CACTGCTGTCAGCCAAGTCATGGTTGGTAACCATGTAGGTTCTTGGGAGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGAACTCCTCAAGATCCTaGACCTCAACGTCCACTGGT +
Preference number: 4 (lower is better)
Translates to: HLAEGLYTEDRQGCLHRQNSSRS*TSTSTG
Trigger: ACCAGTGGACGTTGAGGTCCAGGATCTTGAGGAGTT...CTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp TCACCCTGTCCCATTCCCTCCCAAGAACCTACATGGTTACCAACCATGACTTGGGGTGCAGAAAGTAGGTaGGGTACATGCCCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: SPCPIPSQEPTWLPTMTWGAESR*GTCPGP
Trigger: TGGACCGGGGCATGTACCCCACCTACTTTCTGCACC...CCAAGTCATGGTTGGTAACCATGTAGGTTCTTGGGAGGGAATGGGACAGGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCAGTCGAGACAAGTCTGTTaGGTCCACAGAGATGAGGTA +
Preference number: 4 (lower is better)
Translates to: WRKAYIQRIGRAVSTGRQSRQVC*VHRDEV
Trigger: TACCTCATCTCTGTGGACCCAACAGACTTGTCTCGA...CTGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp GCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGTCGAGACAAGTCTGTTaGGTCCACAGAGATGAGGTA +
Preference number: 4 (lower is better)
Translates to: AREPTEGQSFIWRKAYIQSRQVC*VHRDEV
Trigger: TACCTCATCTCTGTGGACCCAACAGACTTGTCTCGA...CTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp CATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGTTGCCATGGATGATCTaGAAGTTCTTCACGGAGGCC +
Preference number: 4 (lower is better)
Translates to: HLAEGLYTEDRQGCLHRQLPWMI*KFFTEA
Trigger: GGCCTCCGTGAAGAACTTCCAGATCATCCATGGCAA...CTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp CTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCATCCGGGTCATTGCCATaGATGATCTGGAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: LAEGLYTEDRQGCLHRQASGSLP*MIWKFF
Trigger: GAAGAACTTCCAGATCATCCATGGCAATGACCCGGA...TGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp GGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTACTACCCCAAGGGTaGGAGTGTGTGTTGATCTCG +
Preference number: 4 (lower is better)
Translates to: GPKLHLAEGLYTEDRQGCLLPQG*ECVLIS
Trigger: CGAGATCAACACACACTCCCACCCTTGGGGTAGTAG...ACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACATAAAGTTTGCCATCTGACTCCTTaGCTGAGCGGACGACTGGGC +
Preference number: 4 (lower is better)
Translates to: LQLFKGQAWPPSPLLHKVCHLTP*LSGRLG
Trigger: GCCCAGTCGTCCGCTCAGCCAAGGAGTCAGATGGCA...AACTTTATGTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GACGCACAGACACACACATACACAGACGGACACAGAGCACCTTGGAGCCAGAAGGCCATGGCTTGGGAATaGTTCTCTGGCAGCAGGATT +
Preference number: 4 (lower is better)
Translates to: DAQTHTYTDGHRAPWSQKAMAWE*FSGSRI
Trigger: AATCCTGCTGCCAGAGAACCATTCCCAAGCCATGGC...CTTCTGGCTCCAAGGTGCTCTGTGTCCGTCTGTGTATGTGTGTGTCTGTGCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TCACCCTGTCCCATTCCCTCCCAAGAACCTACATGGTTACCAACCATGACTTGGCTGAATCGGGGGAAGTaGGGAGGGCATGCAGAATGG +
Preference number: 4 (lower is better)
Translates to: SPCPIPSQEPTWLPTMTWLNRGK*GGHAEW
Trigger: CCATTCTGCATGCCCTCCCCACTTCCCCCGATTCAG...CCAAGTCATGGTTGGTAACCATGTAGGTTCTTGGGAGGGAATGGGACAGGGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GACGCACAGACACACACATACACAGACGGACACAGAGCACCTTGGAGCCAGAAGAGCCTGCAGGGTGGATaGTGCCATCCAAGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: DAQTHTYTDGHRAPWSQKSLQGG*CHPRRN
Trigger: ATTTCTCCTTGGATGGCACCATCCACCCTGCAGGCT...CTTCTGGCTCCAAGGTGCTCTGTGTCCGTCTGTGTATGTGTGTGTCTGTGCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GAAATTTGTGCTTGCATAACAGAGCCATGGAAATGGCTATCCCAGCATCTCCCCGAGTCCATGCACCCATaGCCCCAGGGCCAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: EICACITEPWKWLSQHLPESMHP*PQGQWS
Trigger: TGACCACTGGCCCTGGGGCCATGGGTGCATGGACTC...GGGGAGATGCTGGGATAGCCATTTCCATGGCTCTGTTATGCAAGCACAAATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CACCTAGACCGAGAAGTGTGCAGCAGCCGTACTAAGGCCTGCTTACTGCTGAGTACAGAGCCATGGAAATaGCTATCCCAGCATCTCCCC +
Preference number: 4 (lower is better)
Translates to: HLDREVCSSRTKACLLLSTEPWK*LSQHLP
Trigger: GGGGAGATGCTGGGATAGCCATTTCCATGGCTCTGT...ACTCAGCAGTAAGCAGGCCTTAGTACGGCTGCTGCACACTTCTCGGTCTAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TGGGGAGGGCATGCAGAATGGGCCCCCAGGAGGCCAGAGATACTAGTTTCTTGGAGGCATTGTGAAAACTaGCTGTGTTCCCAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: WGGHAEWAPRRPEILVSWRHCEN*LCSQQE
Trigger: CTCTTGCTGGGAACACAGCCAGTTTTCACAATGCCT...CCAAGAAACTAGTATCTCTGGCCTCCTGGGGGCCCATTCTGCATGCCCTCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCAGAGGCATTGTGAAAACTaGCTGTGTTCCCAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: WRKAYIQRIGRAVSTGRQRHCEN*LCSQQE
Trigger: CTCTTGCTGGGAACACAGCCAGTTTTCACAATGCCT...CTGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CAGAGATGTACGGCCGAGGTGTGGGCAGATCCTGCTAGGACAGGTATGCCTTGCACTGAAACCAGCACTTaGATGTCTCCCTTCATCACC +
Preference number: 4 (lower is better)
Translates to: QRCTAEVWADPARTGMPCTETST*MSPFIT
Trigger: GGTGATGAAGGGAGACATCCAAGTGCTGGTTTCAGT...GCAAGGCATACCTGTCCTAGCAGGATCTGCCCACACCTCGGCCGTACATCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305253.8
CDS-3UTR TCA 90 bp GGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACTGTTTTGCAGCTCGATaGTACTCTCCGTGTTCTTAT +
Preference number: 4 (lower is better)
Translates to: GPGSPLRAKASSGGRPIYCFAAR*YSPCSY
Trigger: ATAAGAACACGGAGAGTATCATCGAGCTGCAAAACA...GTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR TCA 90 bp GGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCTCTCAGGCTTGAGTaGGGCCTTCTGAAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: GQSFIWRKAYIQRIGRAVSLRLE*GLLKLK
Trigger: CTTCAACTTCAGAAGGCCTCACTCAAGCCTGAGAGA...GACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp AAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACTTCCTACTGCCTCTGTaGGACACAGCAAACCTGGAG +
Preference number: 4 (lower is better)
Translates to: KLHLAEGLYTEDRQGCLHFLLPL*DTANLE
Trigger: CTCCAGGTTTGCTGTGTCTCACAGAGGCAGTAGGAA...GTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp CCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAAGTGCACTCAGCTACTaGTGCTTGTCATTCAATGCC +
Preference number: 4 (lower is better)
Translates to: PGSPLRAKASSGGRPIYRSALSY*CLSFNA
Trigger: GGCATTGAATGACAAGCATCAGTAGCTGAGTGCACT...TCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp CCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCTTGGATGGTGTCCTCTaGCTCAGAACCCTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: PTEGQSFIWRKAYIQRIGLDGVL*LRTLRE
Trigger: TTCTCTCAGGGTTCTGAGTCAGAGGACACCATCCAA...GCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp ATTCCCTCCCAAGAACCTACATGGTTACCAACCATGACTTGGCTGACAGCAGTGGGCCACTTGGCATCCTaGGTTAACACAGGGATGCCG +
Preference number: 4 (lower is better)
Translates to: IPSQEPTWLPTMTWLTAVGHLAS*VNTGMP
Trigger: CGGCATCCCTGTGTTAACTCAGGATGCCAAGTGGCC...CACTGCTGTCAGCCAAGTCATGGTTGGTAACCATGTAGGTTCTTGGGAGGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp AAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACTGGAGAAGTGTAATCTaGGGGCCACTTGGCATCCTG +
Preference number: 4 (lower is better)
Translates to: KLHLAEGLYTEDRQGCLHWRSVI*GPLGIL
Trigger: CAGGATGCCAAGTGGCCCTCAGATTACACTTCTCCA...GTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CACATTCACTGTGCCCCTACCTGCTGGAGTACCCATTGCCATCTGACTCCTTGGGCTGCCTCAGGTTTCTaGCCTCATCATCTAAGACAC +
Preference number: 4 (lower is better)
Translates to: HIHCAPTCWSTHCHLTPWAASGF*PHHLRH
Trigger: GTGTCTTAGATGATGAGGGCAGAAACCTGAGGCAGC...CCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGCACAGTGAATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTGCTGCCTCAGGTTTCTaGCCTCATCATCTAAGACAC +
Preference number: 4 (lower is better)
Translates to: GPKLHLAEGLYTEDRQGCAASGF*PHHLRH
Trigger: GTGTCTTAGATGATGAGGGCAGAAACCTGAGGCAGC...ACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp TTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAGAGAAGGGAAGGCCAGTGCGATCAAGCTTCTGCTaGCTCAGGTTTCTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: LTQGCRSWGKELEKGRPVRSSFC*LRFLPS
Trigger: TGAGGGCAGAAACCTGAGGCAGCAGAAGCTTGATCG...CACTGGCCTTCCCTTCTCTAATTCCTTACCCCAGCTGCGGCATCCCTGTGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CATACACAGTCTAGGCATTGTGAAAACTGGCTGTGTTCCCAGCAAGAGATACTGCTTGTCTTCTGCCAGTaGTGCTGGCCCGCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: HTQSRHCENWLCSQQEILLVFCQ*CWPAGA
Trigger: GGCACCAGCGGGCCAGCAGCACTGGCAGAAGACAAG...CAGTATCTCTTGCTGGGAACACAGCCAGTTTTCACAATGCCTAGACTGTGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACATAAAGTTCCCACAGTCAGAATCTaGACTGGGCCTTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: LQLFKGQAWPPSPLLHKVPTVRI*TGPWAS
Trigger: TGAGGCCCAAGGCCCAGTGCAGATTCTGACTGTGGG...AACTTTATGTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACATAAAGTTGAGATGCCCTTCCTCTaGATCGTGGCACGGAGATCC +
Preference number: 4 (lower is better)
Translates to: LQLFKGQAWPPSPLLHKVEMPFL*IVARRS
Trigger: GGATCTCCGTGCCACGATGCAGAGGAAGGGCATCTC...AACTTTATGTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp TCACCCTGTCCCATTCCCTCCCAAGAACCTACATGGTTACCAACCATGACTTGGCCTCGTCAAAGCTCATaGTGCTGGAGATGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: SPCPIPSQEPTWLPTMTWPRQSS*CWRCPS
Trigger: GGAAGGGCATCTCCAGCAGCATGAGCTTTGACGAGG...CCAAGTCATGGTTGGTAACCATGTAGGTTCTTGGGAGGGAATGGGACAGGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp AGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACATCAACGTCCACTGGTTaGTCTGGAGCTGTTGGGCTA +
Preference number: 4 (lower is better)
Translates to: SFIWRKAYIQRIGRAVSTSTSTG*SGAVGL
Trigger: TAGCCCAACAGCTCCAGAGCAACCAGTGGACGTTGA...TGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp TTACAGTTCCCAAGCCTGCAGGGTGGATGGTGCCATCCAAGGAGAAATAGCGGTTCTCCACTACTCCCCTaGCTCAGTAGCAGAGGCAAA +
Preference number: 4 (lower is better)
Translates to: LQFPSLQGGWCHPRRNSGSPLLP*LSSRGK
Trigger: TTTGCCTCTGCTACTGAGGCAGGGGAGTAGTGGAGA...ACCGCTATTTCTCCTTGGATGGCACCATCCACCCTGCAGGCTTGGGAACTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GCCCCTACCTGCTGGAGTACCCATTGCCATCTGACTCCTTGGCTGAGCGGACGACTTTCAACAGGGAACTaGCTGATTTCCTACTGGAAT +
Preference number: 4 (lower is better)
Translates to: APTCWSTHCHLTPWLSGRLSTGN*LISYWN
Trigger: ATTCCAGTAGGAAATCAGGCAGTTCCCTGTTGAAAG...TCGTCCGCTCAGCCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp AGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACACTGCAGGGTGGATGGTaGCATCCAAGGAGAAATAGC +
Preference number: 4 (lower is better)
Translates to: SFIWRKAYIQRIGRAVSTLQGGW*HPRRNS
Trigger: GCTATTTCTCCTTGGATGGCACCATCCACCCTGCAG...TGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp TGGGGAGGGCATGCAGAATGGGCCCCCAGGAGGCCAGAGATACTAGTTTCTTGGAAACTCACTCCCAACTaGCCAATACCATTAGGGACT +
Preference number: 4 (lower is better)
Translates to: WGGHAEWAPRRPEILVSWKLTPN*PIPLGT
Trigger: AGTCCCTAATGGTATTGGGCAGTTGGGAGTGAGTTT...CCAAGAAACTAGTATCTCTGGCCTCCTGGGGGCCCATTCTGCATGCCCTCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp TTACAGTTCCCAAGCCTGCAGGGTGGATGGTGCCATCCAAGGAGAAATAGCGGTGAGTTAACACAGGGATaGCGCAGCTGGGGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: LQFPSLQGGWCHPRRNSGELTQG*RSWGKE
Trigger: TTCCTTACCCCAGCTGCGGCATCCCTGTGTTAACTC...ACCGCTATTTCTCCTTGGATGGCACCATCCACCCTGCAGGCTTGGGAACTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGTAATCTATCTGTTCTaGCCCTCCCGCCTGTATCAT +
Preference number: 4 (lower is better)
Translates to: PGSPLRAKASSGGRPIYRVIYLF*PSRLYH
Trigger: ATGATACAGGCGGGAGGGGCAGAACAGATAGATTAC...TCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp AGAACCTTTATGCACTCTCTCCCACCTAGACCGAGAAGTGTGCAGCAGCCGTACATCTGCACTGGGCCTTaGGCCTCAGACTTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: RTFMHSLPPRPRSVQQPYICTGP*ASDLSS
Trigger: AGAAGACAAGTCTGAGGCCCAAGGCCCAGTGCAGAT...GTACGGCTGCTGCACACTTCTCGGTCTAGGTGGGAGAGAGTGCATAAAGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACATAAAGTTTGGGCGTGGTCTGACTaGCCCACAGTCAGAATCTGC +
Preference number: 4 (lower is better)
Translates to: LQLFKGQAWPPSPLLHKVWAWSD*PTVRIC
Trigger: GCAGATTCTGACTGTGGGCCAGTCAGACCACGCCCA...AACTTTATGTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGTTCCACTTTCCAAAGTaGAGGATGAGGCCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: HLAEGLYTEDRQGCLHRQFHFPK*RMRPSE
Trigger: CTCAGAAGGCCTCATCCTCCACTTTGGAAAGTGGAA...CTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp TGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCAGAACCATGTTCATGCCTaGGACAATCACGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: WRKAYIQRIGRAVSTGRQNHVHA*DNHAHL
Trigger: AAGATGAGCGTGATTGTCCCAGGCATGAACATGGTT...CTGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp GGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTGGCCAAAGCTTCATCTaGCGGAAGGCCTATATACAG +
Preference number: 4 (lower is better)
Translates to: GPKLHLAEGLYTEDRQGCGQSFI*RKAYIQ
Trigger: CTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCC...ACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp AAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACTTTAAGGGCCAGGCTTaGCCACCAAGCCCTTTGCTA +
Preference number: 4 (lower is better)
Translates to: KLHLAEGLYTEDRQGCLHFKGQA*PPSPLL
Trigger: TAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAA...GTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GAAATTTGTGCTTGCATAACAGAGCCATGGAAATGGCTATCCCAGCATCTCCCCTCCTGGGGGTTGTGCTaGGCTGCTCAGCAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: EICACITEPWKWLSQHLPSWGLC*AAQQRA
Trigger: AGCTCTCTGCTGAGCAGCCCAGCACAACCCCCAGGA...GGGGAGATGCTGGGATAGCCATTTCCATGGCTCTGTTATGCAAGCACAAATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp AGGGCTTTCTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACTCAAGGAGCATGCCATaGCTTGGGAATGGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: RAFCSCLRARLGHQALCYSRSMP*LGNGSL
Trigger: CAGAGAACCATTCCCAAGCCATGGCATGCTCCTTGA...GTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAGAAAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp AAGCAAGGTACGACCCCTGCTTGCTTCCCACCAATTTCAGATCTCTATCTGGGCGTATCTCGCCAGCGCTaGCACAAAGTTCTAGTGCCC +
Preference number: 4 (lower is better)
Translates to: KQGTTPACFPPISDLYLGVSRQR*HKVLVP
Trigger: GGGCACTAGAACTTTGTGCCAGCGCTGGCGAGATAC...GCCCAGATAGAGATCTGAAATTGGTGGGAAGCAAGCAGGGGTCGTACCTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCCCTGACAGAGTTTTGTaGCTGAGGCTATCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PTEGQSFIWRKAYIQRIGPDRVL*LRLSFS
Trigger: GGAGAAGGATAGCCTCAGCCACAAAACTCTGTCAGG...GCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGACTTGGAGAAGAGTTaGGGAAGTGAACTTCACCAC +
Preference number: 4 (lower is better)
Translates to: PGSPLRAKASSGGRPIYRDLEKS*GSELHH
Trigger: GTGGTGAAGTTCACTTCCCCAACTCTTCTCCAAGTC...TCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CAGAGATGTACGGCCGAGGTGTGGGCAGATCCTGCTAGGACAGGTATGCCTTGCCCTGAGAGAAAAAGCTaGTATCTTCCCAGGTATACC +
Preference number: 4 (lower is better)
Translates to: QRCTAEVWADPARTGMPCPERKS*YLPRYT
Trigger: GGTATACCTGGGAAGATACCAGCTTTTTCTCTCAGG...GCAAGGCATACCTGTCCTAGCAGGATCTGCCCACACCTCGGCCGTACATCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCATGCATAACAGAGCCATaGAAATGGCTATCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: LAEGLYTEDRQGCLHRQACITEP*KWLSQH
Trigger: ATGCTGGGATAGCCATTTCCATGGCTCTGTTATGCA...TGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp AAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACCAGGGATGCCGCAGCTaGGGTAAGGAATTAGAGAAG +
Preference number: 4 (lower is better)
Translates to: KLHLAEGLYTEDRQGCLHQGCRS*GKELEK
Trigger: CTTCTCTAATTCCTTACCCCAGCTGCGGCATCCCTG...GTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp AGAACCTTTATGCACTCTCTCCCACCTAGACCGAGAAGTGTGCAGCAGCCGTACCAGGGATGCCGCAGCTaGGGTAAGGAATTAGAGAAG +
Preference number: 4 (lower is better)
Translates to: RTFMHSLPPRPRSVQQPYQGCRS*GKELEK
Trigger: CTTCTCTAATTCCTTACCCCAGCTGCGGCATCCCTG...GTACGGCTGCTGCACACTTCTCGGTCTAGGTGGGAGAGAGTGCATAAAGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAGAGAAGGGAAGGCCAGTGATAGAGTCCCAACTCTaGGCCCTGACTGCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: LTQGCRSWGKELEKGRPVIESQL*ALTAGH
Trigger: ATGACCTGCAGTCAGGGCCCAGAGTTGGGACTCTAT...CACTGGCCTTCCCTTCTCTAATTCCTTACCCCAGCTGCGGCATCCCTGTGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GAAATTTGTGCTTGCATAACAGAGCCATGGAAATGGCTATCCCAGCATCTCCCCAAGGCAAAGGTGTCCTaGCCCCCATCGTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: EICACITEPWKWLSQHLPKAKVS*PPSWPQ
Trigger: CTGTGGCCACGATGGGGGCCAGGACACCTTTGCCTT...GGGGAGATGCTGGGATAGCCATTTCCATGGCTCTGTTATGCAAGCACAAATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305253.8
3UTR CAA 72 bp CTCTTGCGGCCTTCCCAGCTGAAGAGGTTGCTCAGCTaGGTAAGTACGACTACAACACACTACTACCCCAAG +
Preference number: 4 (lower is better)
Translates to: LLRPSQLKRLLS*VSTTTTHYYPK
Trigger: CTTGGGGTAGTAGTGTGTTGTAGTCGTACTTACCAAGCTGAGCAACCTCTTCAGCTGGGAAGGCCGCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp TGGGGAGGGCATGCAGAATGGGCCCCCAGGAGGCCAGAGATACTAGTTTCTTGGCATTGTCATAAACAGTaGACTTGGTGCCCATCAAGT +
Preference number: 4 (lower is better)
Translates to: WGGHAEWAPRRPEILVSWHCHKQ*TWCPSS
Trigger: ACTTGATGGGCACCAAGTTCACTGTTTATGACAATG...CCAAGAAACTAGTATCTCTGGCCTCCTGGGGGCCCATTCTGCATGCCCTCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp AAGCAAGGTACGACCCCTGCTTGCTTCCCACCAATTTCAGATCTCTATCTGGGCGAGGATGAGGCCTTCTaGGGGTTGACTCCATTGTCA +
Preference number: 4 (lower is better)
Translates to: KQGTTPACFPPISDLYLGEDEAF*GLTPLS
Trigger: TGACAATGGAGTCAACCCTCAGAAGGCCTCATCCTC...GCCCAGATAGAGATCTGAAATTGGTGGGAAGCAAGCAGGGGTCGTACCTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp AAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACGGTCATTGCCATGGATaGTCTGGAAGTTCTTCACGG +
Preference number: 4 (lower is better)
Translates to: KLHLAEGLYTEDRQGCLHGHCHG*SGSSSR
Trigger: CCGTGAAGAACTTCCAGATCATCCATGGCAATGACC...GTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR TCA 90 bp GGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCAGTTGTAATCCATGGTaGACACATCCTCTGCTACCC +
Preference number: 4 (lower is better)
Translates to: GQSFIWRKAYIQRIGRAVSCNPW*THPLLP
Trigger: GGGTAGCAGAGGATGTGTTCACCATGGATTACAACT...GACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR TCA 90 bp TTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAGAGAAGGGAAGGCCAGTGTCTCTCAGGCTTGAGTaGGGCCTTCTGAAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: LTQGCRSWGKELEKGRPVSLRLE*GLLKLK
Trigger: CTTCAACTTCAGAAGGCCTCACTCAAGCCTGAGAGA...CACTGGCCTTCCCTTCTCTAATTCCTTACCCCAGCTGCGGCATCCCTGTGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp GTTACAGAGAAGCTGCCTAAACTCACTCCCAACTGCCCAATACCATTAGGGACTTGCACTTCTGCATGCTaGGCCTGTGTCTTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: VTEKLPKLTPNCPIPLGTCTSAC*ACVLQG
Trigger: GCCCTGCAAGACACAGGCTCAGCATGCAGAAGTGCA...AGTCCCTAATGGTATTGGGCAGTTGGGAGTGAGTTTAGGCAGCTTCTCTGTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp CATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGAGAACTTGAAGTTCTaGATGCTGCCATTAACCAGC +
Preference number: 4 (lower is better)
Translates to: HLAEGLYTEDRQGCLHRQENLKF*MLPLTS
Trigger: GCTGGTTAATGGCAGCATTCAGAACTTCAAGTTCTC...CTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp TGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCAGATGCAGAGCGGGAACTaGAAAGCTAACAACATTCTT +
Preference number: 4 (lower is better)
Translates to: WRKAYIQRIGRAVSTGRQMQSGN*KANNIL
Trigger: AAGAATGTTGTTAGCTTTTCAGTTCCCGCTCTGCAT...CTGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp GACGCACAGACACACACATACACAGACGGACACAGAGCACCTTGGAGCCAGAAGGCCTGTATCATGAGATaGCTGAAAATTCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: DAQTHTYTDGHRAPWSQKACIMR*LKIPGG
Trigger: GCCACCTGGAATTTTCAGTCATCTCATGATACAGGC...CTTCTGGCTCCAAGGTGCTCTGTGTCCGTCTGTGTATGTGTGTGTCTGTGCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp CACCTAGACCGAGAAGTGTGCAGCAGCCGTACTAAGGCCTGCTTACTGCTGAGTGCCTGTATCATGAGATaGCTGAAAATTCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: HLDREVCSSRTKACLLLSACIMR*LKIPGG
Trigger: GCCACCTGGAATTTTCAGTCATCTCATGATACAGGC...ACTCAGCAGTAAGCAGGCCTTAGTACGGCTGCTGCACACTTCTCGGTCTAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CACCTAGACCGAGAAGTGTGCAGCAGCCGTACTAAGGCCTGCTTACTGCTGAGTCATGAACCATGTTCATaGCTGGGACAATCACGCTCA +
Preference number: 4 (lower is better)
Translates to: HLDREVCSSRTKACLLLSHEPCS*LGQSRS
Trigger: TGAGCGTGATTGTCCCAGGCATGAACATGGTTCATG...ACTCAGCAGTAAGCAGGCCTTAGTACGGCTGCTGCACACTTCTCGGTCTAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGACAGGTGTCTTGTTTTaGAGCTCGATGATACTCTCC +
Preference number: 4 (lower is better)
Translates to: HLAEGLYTEDRQGCLHRQTGVLF*SSMILS
Trigger: GGAGAGTATCATCGAGCTGCAAAACAAGACACCTGT...CTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR GCA 90 bp GGGGAAGTGAACTTCACCACTCTGCAGAATTGTTCTGGGGCAGAGGGTGTAGAGTACACACATTCACTGTaGCCCTACCTGCTGGAGTAC +
Preference number: 4 (lower is better)
Translates to: GEVNFTTLQNCSGAEGVEYTHSL*PYLLEY
Trigger: GTACTCCAGCAGGTAGGGGCACAGTGAATGTGTGTA...CTCTACACCCTCTGCCCCAGAACAATTCTGCAGAGTGGTGAAGTTCACTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp AGGGCTTTCTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACGGCCACCAAGCCCTTTaGTACATAAAGTTGATGTGG +
Preference number: 4 (lower is better)
Translates to: RAFCSCLRARLGHQALCYGHQAL*YIKLMW
Trigger: CCACATCAACTTTATGTAGCAAAGGGCTTGGTGGCC...GTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAGAAAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CACCTAGACCGAGAAGTGTGCAGCAGCCGTACTAAGGCCTGCTTACTGCTGAGTCTGTTCATGCACTTCTaGATGCTGAGCCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: HLDREVCSSRTKACLLLSLFMHF*MLSLCL
Trigger: AAGACACAGGCTCAGCATGCAGAAGTGCATGAACAG...ACTCAGCAGTAAGCAGGCCTTAGTACGGCTGCTGCACACTTCTCGGTCTAGGTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp TTACAGTTCCCAAGCCTGCAGGGTGGATGGTGCCATCCAAGGAGAAATAGCGGTGGTACGACCCCTGCTTaGTTCCCACCAATTTCAGAT +
Preference number: 4 (lower is better)
Translates to: LQFPSLQGGWCHPRRNSGGTTPA*FPPISD
Trigger: ATCTGAAATTGGTGGGAAGCAAGCAGGGGTCGTACC...ACCGCTATTTCTCCTTGGATGGCACCATCCACCCTGCAGGCTTGGGAACTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGCTGCTAGGACAGGTATaGCTTGCTTTAAGCATTCAA +
Preference number: 4 (lower is better)
Translates to: AREPTEGQSFIWRKAYIQLLGQV*LALSIQ
Trigger: TTGAATGCTTAAAGCAAGGCATACCTGTCCTAGCAG...CTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp TGGGGAGGGCATGCAGAATGGGCCCCCAGGAGGCCAGAGATACTAGTTTCTTGGATGCTTGTCATTCAATaGCTGACAGAGTTTTGTGGC +
Preference number: 4 (lower is better)
Translates to: WGGHAEWAPRRPEILVSWMLVIQ*LTEFCG
Trigger: GCCACAAAACTCTGTCAGGCATTGAATGACAAGCAT...CCAAGAAACTAGTATCTCTGGCCTCCTGGGGGCCCATTCTGCATGCCCTCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGAAACTCACTCCCAACTaGCCAATACCATTAGGGACT +
Preference number: 4 (lower is better)
Translates to: HLAEGLYTEDRQGCLHRQKLTPN*PIPLGT
Trigger: AGTCCCTAATGGTATTGGGCAGTTGGGAGTGAGTTT...CTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGCATCTCCCCTCACTaGAGACTCCATTGTAAGCAA +
Preference number: 4 (lower is better)
Translates to: PTEGQSFIWRKAYIQRIGSISPH*RLHCKQ
Trigger: TTGCTTACAATGGAGTCTGCAGTGAGGGGAGATGCT...GCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp ATTCCCTCCCAAGAACCTACATGGTTACCAACCATGACTTGGCTGACAGCAGTGGGTCCCACTTCAGGCTaGATAGTAAGACCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: IPSQEPTWLPTMTWLTAVGPTSG*IVRPGA
Trigger: GGCTCCAGGTCTTACTATGCAGCCTGAAGTGGGACC...CACTGCTGTCAGCCAAGTCATGGTTGGTAACCATGTAGGTTCTTGGGAGGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305253.8
CDS-3UTR CCA 90 bp GAAATTTGTGCTTGCATAACAGAGCCATGGAAATGGCTATCCCAGCATCTCCCCTGGGCGTGGTCTGACTaGCCCACAGTCAGAATCTGC +
Preference number: 4 (lower is better)
Translates to: EICACITEPWKWLSQHLPWAWSD*PTVRIC
Trigger: GCAGATTCTGACTGTGGGCCAGTCAGACCACGCCCA...GGGGAGATGCTGGGATAGCCATTTCCATGGCTCTGTTATGCAAGCACAAATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TCACCCTGTCCCATTCCCTCCCAAGAACCTACATGGTTACCAACCATGACTTGGCAAAGCTCATGCTGCTaGAGATGCCCTTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SPCPIPSQEPTWLPTMTWQSSCC*RCPSSA
Trigger: TGCAGAGGAAGGGCATCTCCAGCAGCATGAGCTTTG...CCAAGTCATGGTTGGTAACCATGTAGGTTCTTGGGAGGGAATGGGACAGGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAGAGAAGGGAAGGCCAGTGAACTCCTCAAGATCCTaGACCTCAACGTCCACTGGT +
Preference number: 4 (lower is better)
Translates to: LTQGCRSWGKELEKGRPVNSSRS*TSTSTG
Trigger: ACCAGTGGACGTTGAGGTCCAGGATCTTGAGGAGTT...CACTGGCCTTCCCTTCTCTAATTCCTTACCCCAGCTGCGGCATCCCTGTGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCTTCCACTTTCCAAAGTaGAGGATGAGGCCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: PTEGQSFIWRKAYIQRIGFHFPK*RMRPSE
Trigger: CTCAGAAGGCCTCATCCTCCACTTTGGAAAGTGGAA...GCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp GGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACGTTGATCTCGTGGCATaGAAAGAATTATTCTCATCC +
Preference number: 4 (lower is better)
Translates to: GPGSPLRAKASSGGRPIYVDLVA*KELFSS
Trigger: GGATGAGAATAATTCTTTCCATGCCACGAGATCAAC...GTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTGACACAGGCCAATCCTaGATCATACTCACGTGCAAA +
Preference number: 4 (lower is better)
Translates to: GPKLHLAEGLYTEDRQGCDTGQS*IILTCK
Trigger: TTTGCACGTGAGTATGATCCAGGATTGGCCTGTGTC...ACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCGACACAGGCCAATCCTaGATCATACTCACGTGCAAA +
Preference number: 4 (lower is better)
Translates to: FIWRKAYIQRIGRAVSTGDTGQS*IILTCK
Trigger: TTTGCACGTGAGTATGATCCAGGATTGGCCTGTGTC...GCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GGGGAAGTGAACTTCACCACTCTGCAGAATTGTTCTGGGGCAGAGGGTGTAGAGGCAAAAGCTAATCGTTaGAGGGGGTCTCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: GEVNFTTLQNCSGAEGVEAKANR*RGSLTE
Trigger: CTCTGTGAGAGACCCCCTCCAACGATTAGCTTTTGC...CTCTACACCCTCTGCCCCAGAACAATTCTGCAGAGTGGTGAAGTTCACTTCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCAAACAACATTCTTGGATaGTGTCCTCTGACTCAGAAC +
Preference number: 4 (lower is better)
Translates to: LAEGLYTEDRQGCLHRQANNILG*CPLTQN
Trigger: GTTCTGAGTCAGAGGACACCATCCAAGAATGTTGTT...TGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CAGAGATGTACGGCCGAGGTGTGGGCAGATCCTGCTAGGACAGGTATGCCTTGCAACAACATTCTTGGATaGTGTCCTCTGACTCAGAAC +
Preference number: 4 (lower is better)
Translates to: QRCTAEVWADPARTGMPCNNILG*CPLTQN
Trigger: GTTCTGAGTCAGAGGACACCATCCAAGAATGTTGTT...GCAAGGCATACCTGTCCTAGCAGGATCTGCCCACACCTCGGCCGTACATCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TGGGGAGGGCATGCAGAATGGGCCCCCAGGAGGCCAGAGATACTAGTTTCTTGGTTGGCTTATTACCGGTaGCTACTACAAACCTACAGA +
Preference number: 4 (lower is better)
Translates to: WGGHAEWAPRRPEILVSWLAYYR*LLQTYR
Trigger: TCTGTAGGTTTGTAGTAGCCACCGGTAATAAGCCAA...CCAAGAAACTAGTATCTCTGGCCTCCTGGGGGCCCATTCTGCATGCCCTCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAGAGAAGGGAAGGCCAGTGAGTGGGTTTAAGGGATaGTCCCACTTCAGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: LTQGCRSWGKELEKGRPVSGFKG*SHFRLH
Trigger: ATGCAGCCTGAAGTGGGACCATCCCTTAAACCCACT...CACTGGCCTTCCCTTCTCTAATTCCTTACCCCAGCTGCGGCATCCCTGTGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305253.8
CDS-3UTR TCA 90 bp ATTCCCTCCCAAGAACCTACATGGTTACCAACCATGACTTGGCTGACAGCAGTGTCTTCCGAGGCCCCTTaGAGCCTAAGACGTTTGTCT +
Preference number: 4 (lower is better)
Translates to: IPSQEPTWLPTMTWLTAVSSEAP*SLRRLS
Trigger: AGACAAACGTCTTAGGCTTCAAGGGGCCTCGGAAGA...CACTGCTGTCAGCCAAGTCATGGTTGGTAACCATGTAGGTTCTTGGGAGGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp AGAACCTTTATGCACTCTCTCCCACCTAGACCGAGAAGTGTGCAGCAGCCGTACAGTTGTAATCCATGGTaGACACATCCTCTGCTACCC +
Preference number: 4 (lower is better)
Translates to: RTFMHSLPPRPRSVQQPYSCNPW*THPLLP
Trigger: GGGTAGCAGAGGATGTGTTCACCATGGATTACAACT...GTACGGCTGCTGCACACTTCTCGGTCTAGGTGGGAGAGAGTGCATAAAGGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp GGGGAAGTGAACTTCACCACTCTGCAGAATTGTTCTGGGGCAGAGGGTGTAGAGAACTTCTCTCAGGCTTaGGTGAGGCCTTCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: GEVNFTTLQNCSGAEGVENFSQA*VRPSEV
Trigger: AACTTCAGAAGGCCTCACTCAAGCCTGAGAGAAGTT...CTCTACACCCTCTGCCCCAGAACAATTCTGCAGAGTGGTGAAGTTCACTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp CACCTAGACCGAGAAGTGTGCAGCAGCCGTACTAAGGCCTGCTTACTGCTGAGTGAGAACTTGAAGTTCTaGATGCTGCCATTAACCAGC +
Preference number: 4 (lower is better)
Translates to: HLDREVCSSRTKACLLLSENLKF*MLPLTS
Trigger: GCTGGTTAATGGCAGCATTCAGAACTTCAAGTTCTC...ACTCAGCAGTAAGCAGGCCTTAGTACGGCTGCTGCACACTTCTCGGTCTAGGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp CCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCTTGTCATTCAATGCCTaGCAGAGTTTTGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PTEGQSFIWRKAYIQRIGLSFNA*QSFVAE
Trigger: CTCAGCCACAAAACTCTGTCAGGCATTGAATGACAA...GCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp GGGGAAGTGAACTTCACCACTCTGCAGAATTGTTCTGGGGCAGAGGGTGTAGAGAGTGCACTCAGCTACTaGTGCTTGTCATTCAATGCC +
Preference number: 4 (lower is better)
Translates to: GEVNFTTLQNCSGAEGVESALSY*CLSFNA
Trigger: GGCATTGAATGACAAGCATCAGTAGCTGAGTGCACT...CTCTACACCCTCTGCCCCAGAACAATTCTGCAGAGTGGTGAAGTTCACTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GAAATTTGTGCTTGCATAACAGAGCCATGGAAATGGCTATCCCAGCATCTCCCCTGCCGATCAAGCTTCTaGTGCCTCAGGTTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: EICACITEPWKWLSQHLPCRSSF*CLRFLP
Trigger: GGGCAGAAACCTGAGGCAGCAGAAGCTTGATCGGCA...GGGGAGATGCTGGGATAGCCATTTCCATGGCTCTGTTATGCAAGCACAAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp TTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAGAGAAGGGAAGGCCAGTGCATGAACCATGTTCATaGCTGGGACAATCACGCTCA +
Preference number: 4 (lower is better)
Translates to: LTQGCRSWGKELEKGRPVHEPCS*LGQSRS
Trigger: TGAGCGTGATTGTCCCAGGCATGAACATGGTTCATG...CACTGGCCTTCCCTTCTCTAATTCCTTACCCCAGCTGCGGCATCCCTGTGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp AAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACCCTGGAGAAATCAAATaGGCTAGAAACCTAGCCACC +
Preference number: 4 (lower is better)
Translates to: KLHLAEGLYTEDRQGCLHPGEIK*ARNLAT
Trigger: GGTGGCTAGGTTTCTAGCGCATTTGATTTCTCCAGG...GTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp TTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAGAGAAGGGAAGGCCAGTGCTGTTCATGCACTTCTaGATGCTGAGCCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: LTQGCRSWGKELEKGRPVLFMHF*MLSLCL
Trigger: AAGACACAGGCTCAGCATGCAGAAGTGCATGAACAG...CACTGGCCTTCCCTTCTCTAATTCCTTACCCCAGCTGCGGCATCCCTGTGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp TGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCAGTGGATCATACTCACGTaGAAAAAGCCAGACAACTTT +
Preference number: 4 (lower is better)
Translates to: WRKAYIQRIGRAVSTGRQWIILT*KKPDNF
Trigger: AAAGTTGTCTGGCTTTTTGCACGTGAGTATGATCCA...CTGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACATAAAGTTCTGCAGGGTGGATGGTaGCATCCAAGGAGAAATAGC +
Preference number: 4 (lower is better)
Translates to: LQLFKGQAWPPSPLLHKVLQGGW*HPRRNS
Trigger: GCTATTTCTCCTTGGATGGCACCATCCACCCTGCAG...AACTTTATGTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCCTGTCATTAATTCCCTaGCCAAAGACCATCCATCCA +
Preference number: 4 (lower is better)
Translates to: PTEGQSFIWRKAYIQRIGLSLIP*PKTIHP
Trigger: TGGATGGATGGTCTTTGGGCAGGGAATTAATGACAG...GCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GACGCACAGACACACACATACACAGACGGACACAGAGCACCTTGGAGCCAGAAGCTGTCATTAATTCCCTaGCCAAAGACCATCCATCCA +
Preference number: 4 (lower is better)
Translates to: DAQTHTYTDGHRAPWSQKLSLIP*PKTIHP
Trigger: TGGATGGATGGTCTTTGGGCAGGGAATTAATGACAG...CTTCTGGCTCCAAGGTGCTCTGTGTCCGTCTGTGTATGTGTGTGTCTGTGCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CACATTCACTGTGCCCCTACCTGCTGGAGTACCCATTGCCATCTGACTCCTTGGGAAGGCCAGTGTTACTaGAGTAAGAGAAAACCAGGA +
Preference number: 4 (lower is better)
Translates to: HIHCAPTCWSTHCHLTPWEGQCY*SKRKPG
Trigger: TCCTGGTTTTCTCTTACTGCAGTAACACTGGCCTTC...CCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGCACAGTGAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GGGGAAGTGAACTTCACCACTCTGCAGAATTGTTCTGGGGCAGAGGGTGTAGAGGTAATCTATCTGTTCTaGCCCTCCCGCCTGTATCAT +
Preference number: 4 (lower is better)
Translates to: GEVNFTTLQNCSGAEGVEVIYLF*PSRLYH
Trigger: ATGATACAGGCGGGAGGGGCAGAACAGATAGATTAC...CTCTACACCCTCTGCCCCAGAACAATTCTGCAGAGTGGTGAAGTTCACTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTAGCCATCCTAAGTTaGGTTCTAGGAAACTCTGGA +
Preference number: 4 (lower is better)
Translates to: GPKLHLAEGLYTEDRQGCLAILS*VLGNSG
Trigger: TCCAGAGTTTCCTAGAACGCAACTTAGGATGGCTAG...ACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GAAATTTGTGCTTGCATAACAGAGCCATGGAAATGGCTATCCCAGCATCTCCCCACCATCAGGGGCTCCTaGCGCTTCTTCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: EICACITEPWKWLSQHLPTIRGS*RFFFCF
Trigger: GAAGCAGAAGAAGAAGCGCCAGGAGCCCCTGATGGT...GGGGAGATGCTGGGATAGCCATTTCCATGGCTCTGTTATGCAAGCACAAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TTACAGTTCCCAAGCCTGCAGGGTGGATGGTGCCATCCAAGGAGAAATAGCGGTTCGAGACAAGTCTGTTaGGTCCACAGAGATGAGGTA +
Preference number: 4 (lower is better)
Translates to: LQFPSLQGGWCHPRRNSGSRQVC*VHRDEV
Trigger: TACCTCATCTCTGTGGACCCAACAGACTTGTCTCGA...ACCGCTATTTCTCCTTGGATGGCACCATCCACCCTGCAGGCTTGGGAACTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp AGAACCTTTATGCACTCTCTCCCACCTAGACCGAGAAGTGTGCAGCAGCCGTACTTCCACTTTCCAAAGTaGAGGATGAGGCCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: RTFMHSLPPRPRSVQQPYFHFPK*RMRPSE
Trigger: CTCAGAAGGCCTCATCCTCCACTTTGGAAAGTGGAA...GTACGGCTGCTGCACACTTCTCGGTCTAGGTGGGAGAGAGTGCATAAAGGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GACGCACAGACACACACATACACAGACGGACACAGAGCACCTTGGAGCCAGAAGAACCATGTTCATGCCTaGGACAATCACGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: DAQTHTYTDGHRAPWSQKNHVHA*DNHAHL
Trigger: AAGATGAGCGTGATTGTCCCAGGCATGAACATGGTT...CTTCTGGCTCCAAGGTGCTCTGTGTCCGTCTGTGTATGTGTGTGTCTGTGCGTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp AGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACATCCGGGTCATTGCCATaGATGATCTGGAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: SFIWRKAYIQRIGRAVSTSGSLP*MIWKFF
Trigger: GAAGAACTTCCAGATCATCCATGGCAATGACCCGGA...TGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CCA 90 bp GTTACAGAGAAGCTGCCTAAACTCACTCCCAACTGCCCAATACCATTAGGGACTGCTTGCTGTCGAAGCTaGACAGGGCAATGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: VTEKLPKLTPNCPIPLGTACCRS*TGQWQR
Trigger: CCTTTGCCATTGCCCTGTCCAGCTTCGACAGCAAGC...AGTCCCTAATGGTATTGGGCAGTTGGGAGTGAGTTTAGGCAGCTTCTCTGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACATAAAGTTGTCAGGCTGGTGACCTaGACCCCATTTGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LQLFKGQAWPPSPLLHKVVRLVT*TPFVFP
Trigger: AGGAAACACAAATGGGGTCCAGGTCACCAGCCTGAC...AACTTTATGTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCTTACCAACCATGACTTaGCTGACAGCAGTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: PTEGQSFIWRKAYIQRIGLPTMT*LTAVRK
Trigger: CTTTCTCACTGCTGTCAGCCAAGTCATGGTTGGTAA...GCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCTCCCAAGAACCTACATaGTTACCAACCATGACTTGG +
Preference number: 4 (lower is better)
Translates to: FIWRKAYIQRIGRAVSTGSQEPT*LPTMTW
Trigger: CCAAGTCATGGTTGGTAACCATGTAGGTTCTTGGGA...GCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp ATTCCCTCCCAAGAACCTACATGGTTACCAACCATGACTTGGCTGACAGCAGTGAGCCTGCAGGGTGGATaGTGCCATCCAAGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: IPSQEPTWLPTMTWLTAVSLQGG*CHPRRN
Trigger: ATTTCTCCTTGGATGGCACCATCCACCCTGCAGGCT...CACTGCTGTCAGCCAAGTCATGGTTGGTAACCATGTAGGTTCTTGGGAGGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp AGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACACAAGAACTCTTATTGTaGGAGAGGCTGAACCCAGGT +
Preference number: 4 (lower is better)
Translates to: SFIWRKAYIQRIGRAVSTQELLL*ERLNPG
Trigger: ACCTGGGTTCAGCCTCTCCCACAATAAGAGTTCTTG...TGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GGGGAAGTGAACTTCACCACTCTGCAGAATTGTTCTGGGGCAGAGGGTGTAGAGTCTGCAGAATTGTTCTaGGGCAGAGGGTGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: GEVNFTTLQNCSGAEGVESAELF*GRGCRV
Trigger: AACTCTACACCCTCTGCCCCAGAACAATTCTGCAGA...CTCTACACCCTCTGCCCCAGAACAATTCTGCAGAGTGGTGAAGTTCACTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp AAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACTCTGCAGAATTGTTCTaGGGCAGAGGGTGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: KLHLAEGLYTEDRQGCLHSAELF*GRGCRV
Trigger: AACTCTACACCCTCTGCCCCAGAACAATTCTGCAGA...GTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp AGGGCTTTCTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACCCTGAGAGAAAAAGCTaGTATCTTCCCAGGTATACC +
Preference number: 4 (lower is better)
Translates to: RAFCSCLRARLGHQALCYPERKS*YLPRYT
Trigger: GGTATACCTGGGAAGATACCAGCTTTTTCTCTCAGG...GTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAGAAAGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CTGAGCGGACGACTGGGCCACAGCAGCCCTGCAGTGTGCTTCCTCTCCCTCTATCCTAGAGAGATTATGTaGTTTGCTCAAAATCACATA +
Preference number: 4 (lower is better)
Translates to: LSGRLGHSSPAVCFLSLYPREIM*FAQNHI
Trigger: TATGTGATTTTGAGCAAACCACATAATCTCTCTAGG...ATAGAGGGAGAGGAAGCACACTGCAGGGCTGCTGTGGCCCAGTCGTCCGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp AAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACCGTTCTAGGAAACTCTaGATCTCAGCCTCATCTCCA +
Preference number: 4 (lower is better)
Translates to: KLHLAEGLYTEDRQGCLHRSRKL*ISASSP
Trigger: TGGAGATGAGGCTGAGATCCAGAGTTTCCTAGAACG...GTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCCTGCATAGTAAGACCTaGAGCCTGTTGAAATTCCCT +
Preference number: 4 (lower is better)
Translates to: FIWRKAYIQRIGRAVSTGLHSKT*SLLKFP
Trigger: AGGGAATTTCAACAGGCTCCAGGTCTTACTATGCAG...GCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305253.8
CDS-3UTR TCA 90 bp CACATTCACTGTGCCCCTACCTGCTGGAGTACCCATTGCCATCTGACTCCTTGGTTGGGTCCACAGAGATaGGGTAATTGGAAGTTTTAC +
Preference number: 4 (lower is better)
Translates to: HIHCAPTCWSTHCHLTPWLGPQR*GNWKFY
Trigger: GTAAAACTTCCAATTACCTCATCTCTGTGGACCCAA...CCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGCACAGTGAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp GGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTTGGGTCCACAGAGATaGGGTAATTGGAAGTTTTAC +
Preference number: 4 (lower is better)
Translates to: GQSFIWRKAYIQRIGRAVLGPQR*GNWKFY
Trigger: GTAAAACTTCCAATTACCTCATCTCTGTGGACCCAA...GACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR TCA 90 bp CCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCCATTGTCATAAACAGTaGACTTGGTGCCCATCAAGT +
Preference number: 4 (lower is better)
Translates to: PTEGQSFIWRKAYIQRIGHCHKQ*TWCPSS
Trigger: ACTTGATGGGCACCAAGTTCACTGTTTATGACAATG...GCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR TCA 90 bp GGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCATTGTCATAAACAGTaGACTTGGTGCCCATCAAGT +
Preference number: 4 (lower is better)
Translates to: GPKLHLAEGLYTEDRQGCHCHKQ*TWCPSS
Trigger: ACTTGATGGGCACCAAGTTCACTGTTTATGACAATG...ACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR TCA 90 bp GAAATTTGTGCTTGCATAACAGAGCCATGGAAATGGCTATCCCAGCATCTCCCCGAGGATGAGGCCTTCTaGGGGTTGACTCCATTGTCA +
Preference number: 4 (lower is better)
Translates to: EICACITEPWKWLSQHLPEDEAF*GLTPLS
Trigger: TGACAATGGAGTCAACCCTCAGAAGGCCTCATCCTC...GGGGAGATGCTGGGATAGCCATTTCCATGGCTCTGTTATGCAAGCACAAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp TCACCCTGTCCCATTCCCTCCCAAGAACCTACATGGTTACCAACCATGACTTGGATAGAGACTCTCTCATaGACCATGTTCATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SPCPIPSQEPTWLPTMTWIETLS*TMFMPG
Trigger: CCCAGGCATGAACATGGTTCATGAGAGAGTCTCTAT...CCAAGTCATGGTTGGTAACCATGTAGGTTCTTGGGAGGGAATGGGACAGGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp CACCTAGACCGAGAAGTGTGCAGCAGCCGTACTAAGGCCTGCTTACTGCTGAGTTGTTTTGCAGCTCGATaGTACTCTCCGTGTTCTTAT +
Preference number: 4 (lower is better)
Translates to: HLDREVCSSRTKACLLLSCFAAR*YSPCSY
Trigger: ATAAGAACACGGAGAGTATCATCGAGCTGCAAAACA...ACTCAGCAGTAAGCAGGCCTTAGTACGGCTGCTGCACACTTCTCGGTCTAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp CTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCATCTCAAATGTCACCATaGAGATCTCTTCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: LAEGLYTEDRQGCLHRQASQMSP*RSLLLK
Trigger: TTTAAGGAGAAGAGATCTTCATGGTGACATTTGAGA...TGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp CTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACATAAAGTTACAGAGTTTTGTGGCTaGGGCTATCCTTCTCCACAC +
Preference number: 4 (lower is better)
Translates to: LQLFKGQAWPPSPLLHKVTEFCG*GYPSPH
Trigger: GTGTGGAGAAGGATAGCCTCAGCCACAAAACTCTGT...AACTTTATGTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp AAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACTTGTCATTCAATGCCTaGCAGAGTTTTGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: KLHLAEGLYTEDRQGCLHLSFNA*QSFVAE
Trigger: CTCAGCCACAAAACTCTGTCAGGCATTGAATGACAA...GTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp CTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACATAAAGTTGAAGAGTTGGGGAAGTaGACTTCACCACTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LQLFKGQAWPPSPLLHKVEELGK*TSPLCR
Trigger: TCTGCAGAGTGGTGAAGTTCACTTCCCCAACTCTTC...AACTTTATGTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp CATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGTTAAGAAACCTCAGTTaGTTGCTGATTGCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: HLAEGLYTEDRQGCLHRQLRNLS*LLIALF
Trigger: GAAAAGGGCAATCAGCAATCAACTGAGGTTTCTTAA...CTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp AGGGCTTTCTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACTCTGTTCAGAGAGCATaGGATGAATGGACAAAATCC +
Preference number: 4 (lower is better)
Translates to: RAFCSCLRARLGHQALCYSVQRA*DEWTKS
Trigger: GGATTTTGTCCATTCATCTCATGCTCTCTGAACAGA...GTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAGAAAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp GGGGAAGTGAACTTCACCACTCTGCAGAATTGTTCTGGGGCAGAGGGTGTAGAGTCTGACTCAGAACCCTaGGAGAAAAAGCTGGTATCT +
Preference number: 4 (lower is better)
Translates to: GEVNFTTLQNCSGAEGVESDSEP*EKKLVS
Trigger: AGATACCAGCTTTTTCTCTCAGGGTTCTGAGTCAGA...CTCTACACCCTCTGCCCCAGAACAATTCTGCAGAGTGGTGAAGTTCACTTCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GTTACAGAGAAGCTGCCTAAACTCACTCCCAACTGCCCAATACCATTAGGGACTGGTGAACACATCCTCTaGTACCCGGCCAAACTGCAT +
Preference number: 4 (lower is better)
Translates to: VTEKLPKLTPNCPIPLGTGEHIL*YPAKLH
Trigger: ATGCAGTTTGGCCGGGTAGCAGAGGATGTGTTCACC...AGTCCCTAATGGTATTGGGCAGTTGGGAGTGAGTTTAGGCAGCTTCTCTGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp AGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAATTCTTCAAGGAGCATaGCATGGCTTGGGAATGGTT +
Preference number: 4 (lower is better)
Translates to: SFIWRKAYIQRIGRAVSTILQGA*HGLGMV
Trigger: AACCATTCCCAAGCCATGGCATGCTCCTTGAAGAAT...TGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGACAGTTGATTGCTGATTaGCCTTTTCCCCAAATAAAC +
Preference number: 4 (lower is better)
Translates to: PGSPLRAKASSGGRPIYRQLIAD*PFPQIN
Trigger: GTTTATTTGGGGAAAAGGGCAATCAGCAATCAACTG...TCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp TTACAGTTCCCAAGCCTGCAGGGTGGATGGTGCCATCCAAGGAGAAATAGCGGTGAAGGCCAGTGTTACTaGAGTAAGAGAAAACCAGGA +
Preference number: 4 (lower is better)
Translates to: LQFPSLQGGWCHPRRNSGEGQCY*SKRKPG
Trigger: TCCTGGTTTTCTCTTACTGCAGTAACACTGGCCTTC...ACCGCTATTTCTCCTTGGATGGCACCATCCACCCTGCAGGCTTGGGAACTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TTACAGTTCCCAAGCCTGCAGGGTGGATGGTGCCATCCAAGGAGAAATAGCGGTAACCATGTTCATGCCTaGGACAATCACGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: LQFPSLQGGWCHPRRNSGNHVHA*DNHAHL
Trigger: AAGATGAGCGTGATTGTCCCAGGCATGAACATGGTT...ACCGCTATTTCTCCTTGGATGGCACCATCCACCCTGCAGGCTTGGGAACTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GAAATTTGTGCTTGCATAACAGAGCCATGGAAATGGCTATCCCAGCATCTCCCCTTTAAGGGCCAGGCTTaGCCACCAAGCCCTTTGCTA +
Preference number: 4 (lower is better)
Translates to: EICACITEPWKWLSQHLPFKGQA*PPSPLL
Trigger: TAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAA...GGGGAGATGCTGGGATAGCCATTTCCATGGCTCTGTTATGCAAGCACAAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GGGGAAGTGAACTTCACCACTCTGCAGAATTGTTCTGGGGCAGAGGGTGTAGAGGAGATACTAGTTTCTTaGGGGACAGTGGGAACAAAG +
Preference number: 4 (lower is better)
Translates to: GEVNFTTLQNCSGAEGVEEILVS*GTVGTK
Trigger: CTTTGTTCCCACTGTCCCCCAAGAAACTAGTATCTC...CTCTACACCCTCTGCCCCAGAACAATTCTGCAGAGTGGTGAAGTTCACTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GCCCCTACCTGCTGGAGTACCCATTGCCATCTGACTCCTTGGCTGAGCGGACGATGCCTGATTTCCTACTaGAATGGTTTCAATCTAATT +
Preference number: 4 (lower is better)
Translates to: APTCWSTHCHLTPWLSGRCLISY*NGFNLI
Trigger: AATTAGATTGAAACCATTCCAGTAGGAAATCAGGCA...TCGTCCGCTCAGCCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAGAGAAGGGAAGGCCAGTGGTGCCCTCTAGAAACTaGACCATGTTGCAAAAGCTA +
Preference number: 4 (lower is better)
Translates to: LTQGCRSWGKELEKGRPVVPSRN*TMLQKL
Trigger: TAGCTTTTGCAACATGGTCCAGTTTCTAGAGGGCAC...CACTGGCCTTCCCTTCTCTAATTCCTTACCCCAGCTGCGGCATCCCTGTGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TTACAGTTCCCAAGCCTGCAGGGTGGATGGTGCCATCCAAGGAGAAATAGCGGTGTGCCCTCTAGAAACTaGACCATGTTGCAAAAGCTA +
Preference number: 4 (lower is better)
Translates to: LQFPSLQGGWCHPRRNSGVPSRN*TMLQKL
Trigger: TAGCTTTTGCAACATGGTCCAGTTTCTAGAGGGCAC...ACCGCTATTTCTCCTTGGATGGCACCATCCACCCTGCAGGCTTGGGAACTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GGGGAAGTGAACTTCACCACTCTGCAGAATTGTTCTGGGGCAGAGGGTGTAGAGTGCATAACAGAGCCATaGAAATGGCTATCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: GEVNFTTLQNCSGAEGVECITEP*KWLSQH
Trigger: ATGCTGGGATAGCCATTTCCATGGCTCTGTTATGCA...CTCTACACCCTCTGCCCCAGAACAATTCTGCAGAGTGGTGAAGTTCACTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTTTGGCTTATTACCGGTaGCTACTACAAACCTACAGA +
Preference number: 4 (lower is better)
Translates to: GPKLHLAEGLYTEDRQGCLAYYR*LLQTYR
Trigger: TCTGTAGGTTTGTAGTAGCCACCGGTAATAAGCCAA...ACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp CTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACATAAAGTTAGGCCTTCTGAGGGTTaGCTCCATTGTCATAAACAG +
Preference number: 4 (lower is better)
Translates to: LQLFKGQAWPPSPLLHKVRPSEG*LHCHKQ
Trigger: CTGTTTATGACAATGGAGTCAACCCTCAGAAGGCCT...AACTTTATGTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp GAAATTTGTGCTTGCATAACAGAGCCATGGAAATGGCTATCCCAGCATCTCCCCGGTCATTGCCATGGATaGTCTGGAAGTTCTTCACGG +
Preference number: 4 (lower is better)
Translates to: EICACITEPWKWLSQHLPGHCHG*SGSSSR
Trigger: CCGTGAAGAACTTCCAGATCATCCATGGCAATGACC...GGGGAGATGCTGGGATAGCCATTTCCATGGCTCTGTTATGCAAGCACAAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp CCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCTCCAGAGAAATAGCTTaGCCTAACATTAGAGACGAT +
Preference number: 4 (lower is better)
Translates to: PTEGQSFIWRKAYIQRIGSREIA*PNIRDD
Trigger: ATCGTCTCTAATGTTAGGTCAAGCTATTTCTCTGGA...GCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp GTTACAGAGAAGCTGCCTAAACTCACTCCCAACTGCCCAATACCATTAGGGACTGAAGAGTTGGGGAAGTaGACTTCACCACTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: VTEKLPKLTPNCPIPLGTEELGK*TSPLCR
Trigger: TCTGCAGAGTGGTGAAGTTCACTTCCCCAACTCTTC...AGTCCCTAATGGTATTGGGCAGTTGGGAGTGAGTTTAGGCAGCTTCTCTGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp TTACAGTTCCCAAGCCTGCAGGGTGGATGGTGCCATCCAAGGAGAAATAGCGGTTCTGTTCAGAGAGCATaGGATGAATGGACAAAATCC +
Preference number: 4 (lower is better)
Translates to: LQFPSLQGGWCHPRRNSGSVQRA*DEWTKS
Trigger: GGATTTTGTCCATTCATCTCATGCTCTCTGAACAGA...ACCGCTATTTCTCCTTGGATGGCACCATCCACCCTGCAGGCTTGGGAACTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp AGGGCTTTCTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACAGTCCATCTAGGAGATaGAATTTGTGCTTGCATAAC +
Preference number: 4 (lower is better)
Translates to: RAFCSCLRARLGHQALCYSPSRR*NLCLHN
Trigger: GTTATGCAAGCACAAATTTCATCTCCTAGATGGACT...GTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAGAAAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp GAAATTTGTGCTTGCATAACAGAGCCATGGAAATGGCTATCCCAGCATCTCCCCAGGTCCCAGTCACAGTaGAAGCAGACTCATTCAGCT +
Preference number: 4 (lower is better)
Translates to: EICACITEPWKWLSQHLPRSQSQ*KQTHSA
Trigger: AGCTGAATGAGTCTGCTTTCACTGTGACTGGGACCT...GGGGAGATGCTGGGATAGCCATTTCCATGGCTCTGTTATGCAAGCACAAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp AAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACCTTTCAACAGGGAACTaGCTGATTTCCTACTGGAAT +
Preference number: 4 (lower is better)
Translates to: KLHLAEGLYTEDRQGCLHLSTGN*LISYWN
Trigger: ATTCCAGTAGGAAATCAGGCAGTTCCCTGTTGAAAG...GTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GAAATTTGTGCTTGCATAACAGAGCCATGGAAATGGCTATCCCAGCATCTCCCCCCAACTCCCTCTTTGTaGTACAGGAGAAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: EICACITEPWKWLSQHLPPTPSL*YRRKQR
Trigger: CCTCTGCTTTCTCCTGTAGCACAAAGAGGGAGTTGG...GGGGAGATGCTGGGATAGCCATTTCCATGGCTCTGTTATGCAAGCACAAATTTC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp AGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAATGCTTGTCATTCAATaGCTGACAGAGTTTTGTGGC +
Preference number: 4 (lower is better)
Translates to: SFIWRKAYIQRIGRAVSTMLVIQ*LTEFCG
Trigger: GCCACAAAACTCTGTCAGGCATTGAATGACAAGCAT...TGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCTCTATAAGACCAACTTaGCTTTCCACTTGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: PTEGQSFIWRKAYIQRIGSIRPT*LSTWLE
Trigger: TTCCAACCAAGTGGAAAGGCAAGTTGGTCTTATAGA...GCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGACACATAGCTACTAAGTaGAGTAGTGCTTTCTATAAG +
Preference number: 4 (lower is better)
Translates to: PGSPLRAKASSGGRPIYRHIATK*SSAFYK
Trigger: CTTATAGAAAGCACTACTGCACTTAGTAGCTATGTG...TCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCAAGAGATTATGTGGTTTaGTCAAAATCACATAGCTAC +
Preference number: 4 (lower is better)
Translates to: LAEGLYTEDRQGCLHRQARDYVV*SKSHSY
Trigger: GTAGCTATGTGATTTTGAGCAAACCACATAATCTCT...TGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GAAATTTGTGCTTGCATAACAGAGCCATGGAAATGGCTATCCCAGCATCTCCCCTTAGCTGGGAGGAGCTaGAGCTATTCTCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: EICACITEPWKWLSQHLPLAGRS*SYSPPH
Trigger: ATGAGGAGGAGAATAGCTCCAGCTCCTCCCAGCTAA...GGGGAGATGCTGGGATAGCCATTTCCATGGCTCTGTTATGCAAGCACAAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TGGGGAGGGCATGCAGAATGGGCCCCCAGGAGGCCAGAGATACTAGTTTCTTGGTACATAAAGTTGATGTaGCCTTCATACATACACACA +
Preference number: 4 (lower is better)
Translates to: WGGHAEWAPRRPEILVSWYIKLM*PSYIHT
Trigger: TGTGTGTATGTATGAAGGCCACATCAACTTTATGTA...CCAAGAAACTAGTATCTCTGGCCTCCTGGGGGCCCATTCTGCATGCCCTCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCAGTACATAAAGTTGATGTaGCCTTCATACATACACACA +
Preference number: 4 (lower is better)
Translates to: WRKAYIQRIGRAVSTGRQYIKLM*PSYIHT
Trigger: TGTGTGTATGTATGAAGGCCACATCAACTTTATGTA...CTGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CATACACAGTCTAGGCATTGTGAAAACTGGCTGTGTTCCCAGCAAGAGATACTGTTGGGAATGGTTCTCTaGCAGCAGGATTCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: HTQSRHCENWLCSQQEILLGMVL*QQDSQA
Trigger: TGCCTGGGAATCCTGCTGCCAGAGAACCATTCCCAA...CAGTATCTCTTGCTGGGAACACAGCCAGTTTTCACAATGCCTAGACTGTGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp AAGCAAGGTACGACCCCTGCTTGCTTCCCACCAATTTCAGATCTCTATCTGGGCTTACCAACCATGACTTaGCTGACAGCAGTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: KQGTTPACFPPISDLYLGLPTMT*LTAVRK
Trigger: CTTTCTCACTGCTGTCAGCCAAGTCATGGTTGGTAA...GCCCAGATAGAGATCTGAAATTGGTGGGAAGCAAGCAGGGGTCGTACCTTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TTACAGTTCCCAAGCCTGCAGGGTGGATGGTGCCATCCAAGGAGAAATAGCGGTTTTCTTGGGGGACAGTaGGAACAAAGAAATCAAGAG +
Preference number: 4 (lower is better)
Translates to: LQFPSLQGGWCHPRRNSGFLGGQ*EQRNQE
Trigger: CTCTTGATTTCTTTGTTCCCACTGTCCCCCAAGAAA...ACCGCTATTTCTCCTTGGATGGCACCATCCACCCTGCAGGCTTGGGAACTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CATACACAGTCTAGGCATTGTGAAAACTGGCTGTGTTCCCAGCAAGAGATACTGATAGAGTCCCAACTCTaGGCCCTGACTGCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: HTQSRHCENWLCSQQEILIESQL*ALTAGH
Trigger: ATGACCTGCAGTCAGGGCCCAGAGTTGGGACTCTAT...CAGTATCTCTTGCTGGGAACACAGCCAGTTTTCACAATGCCTAGACTGTGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCAGCCTAGAGAGATTATGTaGTTTGCTCAAAATCACATA +
Preference number: 4 (lower is better)
Translates to: WRKAYIQRIGRAVSTGRQPREIM*FAQNHI
Trigger: TATGTGATTTTGAGCAAACCACATAATCTCTCTAGG...CTGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CAA 72 bp GCCAGGCTTGGCCACCAAGCCCTTTGCTACATAAAGTaGATGTGGCCTTCATACATACACACATTCACTGTG +
Preference number: 4 (lower is better)
Translates to: ARLGHQALCYIK*MWPSYIHTFTV
Trigger: CACAGTGAATGTGTGTATGTATGAAGGCCACATCAACTTTATGTAGCAAAGGGCTTGGTGGCCAAGCCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CAA 72 bp CACAAAGTTCTAGTGCCCTCTAGAAACTGGACCATGTaGCAAAAGCTAATCGTTGGAGGGGGTCTCTCACAG +
Preference number: 4 (lower is better)
Translates to: HKVLVPSRNWTM*QKLIVGGGLSQ
Trigger: CTGTGAGAGACCCCCTCCAACGATTAGCTTTTGCAACATGGTCCAGTTTCTAGAGGGCACTAGAACTTTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp ATGAGAGCATATTACTTCTACTTAAGTCAAAACAAGTCCTTCACCTATAAAGCCAGGCCTGCTTACTGCTaGGTAGCCCTCGCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: MRAYYFYLSQNKSFTYKARPAYC*VALAEG
Trigger: CCCCTCCGCGAGGGCTACTCAGCAGTAAGCAGGCCT...GGCTTTATAGGTGAAGGACTTGTTTTGACTTAAGTAGAAGTAATATGCTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp CACATTCACTGTGCCCCTACCTGCTGGAGTACCCATTGCCATCTGACTCCTTGGTCTCAAATGTCACCATaGAGATCTCTTCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: HIHCAPTCWSTHCHLTPWSQMSP*RSLLLK
Trigger: TTTAAGGAGAAGAGATCTTCATGGTGACATTTGAGA...CCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGCACAGTGAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp TCACCCTGTCCCATTCCCTCCCAAGAACCTACATGGTTACCAACCATGACTTGGATGCAGAGCGGGAACTaGAAAGCTAACAACATTCTT +
Preference number: 4 (lower is better)
Translates to: SPCPIPSQEPTWLPTMTWMQSGN*KANNIL
Trigger: AAGAATGTTGTTAGCTTTTCAGTTCCCGCTCTGCAT...CCAAGTCATGGTTGGTAACCATGTAGGTTCTTGGGAGGGAATGGGACAGGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp TTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAGAGAAGGGAAGGCCAGTGAGTCCATCTAGGAGATaGAATTTGTGCTTGCATAAC +
Preference number: 4 (lower is better)
Translates to: LTQGCRSWGKELEKGRPVSPSRR*NLCLHN
Trigger: GTTATGCAAGCACAAATTTCATCTCCTAGATGGACT...CACTGGCCTTCCCTTCTCTAATTCCTTACCCCAGCTGCGGCATCCCTGTGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GAAATTTGTGCTTGCATAACAGAGCCATGGAAATGGCTATCCCAGCATCTCCCCCCTGGAGAAATCAAATaGGCTAGAAACCTAGCCACC +
Preference number: 4 (lower is better)
Translates to: EICACITEPWKWLSQHLPPGEIK*ARNLAT
Trigger: GGTGGCTAGGTTTCTAGCGCATTTGATTTCTCCAGG...GGGGAGATGCTGGGATAGCCATTTCCATGGCTCTGTTATGCAAGCACAAATTTC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp CTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACATAAAGTTATTCTTCAAGGAGCATaGCATGGCTTGGGAATGGTT +
Preference number: 4 (lower is better)
Translates to: LQLFKGQAWPPSPLLHKVILQGA*HGLGMV
Trigger: AACCATTCCCAAGCCATGGCATGCTCCTTGAAGAAT...AACTTTATGTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp AGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACATGGATCATACTCACGTaGAAAAAGCCAGACAACTTT +
Preference number: 4 (lower is better)
Translates to: SFIWRKAYIQRIGRAVSTWIILT*KKPDNF
Trigger: AAAGTTGTCTGGCTTTTTGCACGTGAGTATGATCCA...TGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp AAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACTCTATAAGACCAACTTaGCTTTCCACTTGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: KLHLAEGLYTEDRQGCLHSIRPT*LSTWLE
Trigger: TTCCAACCAAGTGGAAAGGCAAGTTGGTCTTATAGA...GTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp ATTCCCTCCCAAGAACCTACATGGTTACCAACCATGACTTGGCTGACAGCAGTGCTAGCCATCCTAAGTTaGGTTCTAGGAAACTCTGGA +
Preference number: 4 (lower is better)
Translates to: IPSQEPTWLPTMTWLTAVLAILS*VLGNSG
Trigger: TCCAGAGTTTCCTAGAACGCAACTTAGGATGGCTAG...CACTGCTGTCAGCCAAGTCATGGTTGGTAACCATGTAGGTTCTTGGGAGGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GGGGAAGTGAACTTCACCACTCTGCAGAATTGTTCTGGGGCAGAGGGTGTAGAGGTTGATCTCGTGGCATaGAAAGAATTATTCTCATCC +
Preference number: 4 (lower is better)
Translates to: GEVNFTTLQNCSGAEGVEVDLVA*KELFSS
Trigger: GGATGAGAATAATTCTTTCCATGCCACGAGATCAAC...CTCTACACCCTCTGCCCCAGAACAATTCTGCAGAGTGGTGAAGTTCACTTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CATACACAGTCTAGGCATTGTGAAAACTGGCTGTGTTCCCAGCAAGAGATACTGTCAAGGAGCATGCCATaGCTTGGGAATGGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: HTQSRHCENWLCSQQEILSRSMP*LGNGSL
Trigger: CAGAGAACCATTCCCAAGCCATGGCATGCTCCTTGA...CAGTATCTCTTGCTGGGAACACAGCCAGTTTTCACAATGCCTAGACTGTGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp CTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACATAAAGTTTCCCAAGAACCTACATaGTTACCAACCATGACTTGG +
Preference number: 4 (lower is better)
Translates to: LQLFKGQAWPPSPLLHKVSQEPT*LPTMTW
Trigger: CCAAGTCATGGTTGGTAACCATGTAGGTTCTTGGGA...AACTTTATGTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp CATACACAGTCTAGGCATTGTGAAAACTGGCTGTGTTCCCAGCAAGAGATACTGAGGCCTTCTGAGGGTTaGCTCCATTGTCATAAACAG +
Preference number: 4 (lower is better)
Translates to: HTQSRHCENWLCSQQEILRPSEG*LHCHKQ
Trigger: CTGTTTATGACAATGGAGTCAACCCTCAGAAGGCCT...CAGTATCTCTTGCTGGGAACACAGCCAGTTTTCACAATGCCTAGACTGTGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp GGGGAAGTGAACTTCACCACTCTGCAGAATTGTTCTGGGGCAGAGGGTGTAGAGTCTGAACTAGTGTCTTaGTTTTTAAGGCACATTCAC +
Preference number: 4 (lower is better)
Translates to: GEVNFTTLQNCSGAEGVESELVS*FLRHIH
Trigger: GTGAATGTGCCTTAAAAATCAAGACACTAGTTCAGA...CTCTACACCCTCTGCCCCAGAACAATTCTGCAGAGTGGTGAAGTTCACTTCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp GGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTAGAGATTATGTGGTTTaGTCAAAATCACATAGCTAC +
Preference number: 4 (lower is better)
Translates to: GPKLHLAEGLYTEDRQGCRDYVV*SKSHSY
Trigger: GTAGCTATGTGATTTTGAGCAAACCACATAATCTCT...ACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp AAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACTGTGTGTTGATCTCGTaGCATGGAAAGAATTATTCT +
Preference number: 4 (lower is better)
Translates to: KLHLAEGLYTEDRQGCLHCVLIS*HGKNYS
Trigger: AGAATAATTCTTTCCATGCCACGAGATCAACACACA...GTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp TTACAGTTCCCAAGCCTGCAGGGTGGATGGTGCCATCCAAGGAGAAATAGCGGTTGTGTGTTGATCTCGTaGCATGGAAAGAATTATTCT +
Preference number: 4 (lower is better)
Translates to: LQFPSLQGGWCHPRRNSGCVLIS*HGKNYS
Trigger: AGAATAATTCTTTCCATGCCACGAGATCAACACACA...ACCGCTATTTCTCCTTGGATGGCACCATCCACCCTGCAGGCTTGGGAACTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp ATTCCCTCCCAAGAACCTACATGGTTACCAACCATGACTTGGCTGACAGCAGTGTTTCTTGGGGGACAGTaGGAACAAAGAAATCAAGAG +
Preference number: 4 (lower is better)
Translates to: IPSQEPTWLPTMTWLTAVFLGGQ*EQRNQE
Trigger: CTCTTGATTTCTTTGTTCCCACTGTCCCCCAAGAAA...CACTGCTGTCAGCCAAGTCATGGTTGGTAACCATGTAGGTTCTTGGGAGGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp AGGGCTTTCTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACTGCCTGATTTCCTACTaGAATGGTTTCAATCTAATT +
Preference number: 4 (lower is better)
Translates to: RAFCSCLRARLGHQALCYCLISY*NGFNLI
Trigger: AATTAGATTGAAACCATTCCAGTAGGAAATCAGGCA...GTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAGAAAGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CAA 72 bp CAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTaGCTACATAAAGTTGATGTGGCCTTCATACATACA +
Preference number: 4 (lower is better)
Translates to: QLFKGQAWPPSP*LHKVDVAFIHT
Trigger: TGTATGTATGAAGGCCACATCAACTTTATGTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CAA 72 bp CCAAACATCTACTCTAAAGCAAGGTACGACCCCTGCTaGCTTCCCACCAATTTCAGATCTCTATCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: PNIYSKARYDPC*LPTNFRSLSGQ
Trigger: TTGCCCAGATAGAGATCTGAAATTGGTGGGAAGCAAGCAGGGGTCGTACCTTGCTTTAGAGTAGATGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CAA 72 bp GCTACTGATGCTTGTCATTCAATGCCTGACAGAGTTTaGTGGCTGAGGCTATCCTTCTCCACACTTAGGCTA +
Preference number: 4 (lower is better)
Translates to: ATDACHSMPDRV*WLRLSFSTLRL
Trigger: TAGCCTAAGTGTGGAGAAGGATAGCCTCAGCCACAAAACTCTGTCAGGCATTGAATGACAAGCATCAGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR GCA 90 bp AAGCAAGGTACGACCCCTGCTTGCTTCCCACCAATTTCAGATCTCTATCTGGGCCACATAGCTACTAAGTaGAGTAGTGCTTTCTATAAG +
Preference number: 4 (lower is better)
Translates to: KQGTTPACFPPISDLYLGHIATK*SSAFYK
Trigger: CTTATAGAAAGCACTACTGCACTTAGTAGCTATGTG...GCCCAGATAGAGATCTGAAATTGGTGGGAAGCAAGCAGGGGTCGTACCTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp GTTACAGAGAAGCTGCCTAAACTCACTCCCAACTGCCCAATACCATTAGGGACTAGGGAAGGGCTAAACTaGAACTATAGAAAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: VTEKLPKLTPNCPIPLGTREGLN*NYRKED
Trigger: ATCCTCCTTTCTATAGTTCCAGTTTAGCCCTTCCCT...AGTCCCTAATGGTATTGGGCAGTTGGGAGTGAGTTTAGGCAGCTTCTCTGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp ATGAGAGCATATTACTTCTACTTAAGTCAAAACAAGTCCTTCACCTATAAAGCCGGTGCAGAAAGTAGGTaGGGTACATGCCCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: MRAYYFYLSQNKSFTYKAGAESR*GTCPGP
Trigger: TGGACCGGGGCATGTACCCCACCTACTTTCTGCACC...GGCTTTATAGGTGAAGGACTTGTTTTGACTTAAGTAGAAGTAATATGCTCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp ATGAGAGCATATTACTTCTACTTAAGTCAAAACAAGTCCTTCACCTATAAAGCCTGTACGGCCGAGGTGTaGGCAGATCCTGCTAGGACA +
Preference number: 4 (lower is better)
Translates to: MRAYYFYLSQNKSFTYKACTAEV*ADPART
Trigger: TGTCCTAGCAGGATCTGCCCACACCTCGGCCGTACA...GGCTTTATAGGTGAAGGACTTGTTTTGACTTAAGTAGAAGTAATATGCTCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp CATACACAGTCTAGGCATTGTGAAAACTGGCTGTGTTCCCAGCAAGAGATACTGTCCAGAGAAATAGCTTaGCCTAACATTAGAGACGAT +
Preference number: 4 (lower is better)
Translates to: HTQSRHCENWLCSQQEILSREIA*PNIRDD
Trigger: ATCGTCTCTAATGTTAGGTCAAGCTATTTCTCTGGA...CAGTATCTCTTGCTGGGAACACAGCCAGTTTTCACAATGCCTAGACTGTGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp ATGAGAGCATATTACTTCTACTTAAGTCAAAACAAGTCCTTCACCTATAAAGCCCCGCCTTGGTTCTCTTaGCTGAAGCTGGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: MRAYYFYLSQNKSFTYKAPPWFS*LKLVLL
Trigger: CAACAGCACCAGCTTCAGCCAAGAGAACCAAGGCGG...GGCTTTATAGGTGAAGGACTTGTTTTGACTTAAGTAGAAGTAATATGCTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp ATGAGAGCATATTACTTCTACTTAAGTCAAAACAAGTCCTTCACCTATAAAGCCGCTTGCTGTCGAAGCTaGACAGGGCAATGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: MRAYYFYLSQNKSFTYKAACCRS*TGQWQR
Trigger: CCTTTGCCATTGCCCTGTCCAGCTTCGACAGCAAGC...GGCTTTATAGGTGAAGGACTTGTTTTGACTTAAGTAGAAGTAATATGCTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp ATGAGAGCATATTACTTCTACTTAAGTCAAAACAAGTCCTTCACCTATAAAGCCTTGCCATGGATGATCTaGAAGTTCTTCACGGAGGCC +
Preference number: 4 (lower is better)
Translates to: MRAYYFYLSQNKSFTYKALPWMI*KFFTEA
Trigger: GGCCTCCGTGAAGAACTTCCAGATCATCCATGGCAA...GGCTTTATAGGTGAAGGACTTGTTTTGACTTAAGTAGAAGTAATATGCTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp ATGAGAGCATATTACTTCTACTTAAGTCAAAACAAGTCCTTCACCTATAAAGCCGGCCAAAGCTTCATCTaGCGGAAGGCCTATATACAG +
Preference number: 4 (lower is better)
Translates to: MRAYYFYLSQNKSFTYKAGQSFI*RKAYIQ
Trigger: CTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCC...GGCTTTATAGGTGAAGGACTTGTTTTGACTTAAGTAGAAGTAATATGCTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp ATGAGAGCATATTACTTCTACTTAAGTCAAAACAAGTCCTTCACCTATAAAGCCTCCGGGTCATTGCCATaGATGATCTGGAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: MRAYYFYLSQNKSFTYKASGSLP*MIWKFF
Trigger: GAAGAACTTCCAGATCATCCATGGCAATGACCCGGA...GGCTTTATAGGTGAAGGACTTGTTTTGACTTAAGTAGAAGTAATATGCTCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp ATGAGAGCATATTACTTCTACTTAAGTCAAAACAAGTCCTTCACCTATAAAGCCCAAGAACTCTTATTGTaGGAGAGGCTGAACCCAGGT +
Preference number: 4 (lower is better)
Translates to: MRAYYFYLSQNKSFTYKAQELLL*ERLNPG
Trigger: ACCTGGGTTCAGCCTCTCCCACAATAAGAGTTCTTG...GGCTTTATAGGTGAAGGACTTGTTTTGACTTAAGTAGAAGTAATATGCTCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp ATGAGAGCATATTACTTCTACTTAAGTCAAAACAAGTCCTTCACCTATAAAGCCTTGGGTCCACAGAGATaGGGTAATTGGAAGTTTTAC +
Preference number: 4 (lower is better)
Translates to: MRAYYFYLSQNKSFTYKALGPQR*GNWKFY
Trigger: GTAAAACTTCCAATTACCTCATCTCTGTGGACCCAA...GGCTTTATAGGTGAAGGACTTGTTTTGACTTAAGTAGAAGTAATATGCTCTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CCA 90 bp ATGAGAGCATATTACTTCTACTTAAGTCAAAACAAGTCCTTCACCTATAAAGCCAGGGAAGGGCTAAACTaGAACTATAGAAAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: MRAYYFYLSQNKSFTYKAREGLN*NYRKED
Trigger: ATCCTCCTTTCTATAGTTCCAGTTTAGCCCTTCCCT...GGCTTTATAGGTGAAGGACTTGTTTTGACTTAAGTAGAAGTAATATGCTCTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR TCA 90 bp ATGAGAGCATATTACTTCTACTTAAGTCAAAACAAGTCCTTCACCTATAAAGCCTCTGAACTAGTGTCTTaGTTTTTAAGGCACATTCAC +
Preference number: 4 (lower is better)
Translates to: MRAYYFYLSQNKSFTYKASELVS*FLRHIH
Trigger: GTGAATGTGCCTTAAAAATCAAGACACTAGTTCAGA...GGCTTTATAGGTGAAGGACTTGTTTTGACTTAAGTAGAAGTAATATGCTCTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
3UTR CAA 72 bp GTGCTTTCTATAAGACCAACTTGCCTTTCCACTTGGTaGGAAAATTTAAAAACCAAACCTGTCGTAATCTAT +
Preference number: 4 (lower is better)
Translates to: VLSIRPTCLSTW*ENLKTKPVVIY
Trigger: ATAGATTACGACAGGTTTGGTTTTTAAATTTTCCAACCAAGTGGAAAGGCAAGTTGGTCTTATAGAAAGCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS GCA 90 bp CTGCCTGCGCGGCGCGGCGAGGCGAGATGGGCGAAGCTCCGGGAGTaGGCGGGTCGTGCGCGCGCGTGGAGGCGGGGAGGCCGACCGCAC +
Preference number: 5 (lower is better)
Translates to: LPARRGEARWAKLRE*AGRARAWRRGGRPH
Trigger: GTGCGGTCGGCCTCCCCGCCTCCACGCGCGCGCACGACCCGCGCACTCCCGGAGCTTCGCCCATCTCGCCTCGCCGCGCCGCGCAGGCAG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299506.3
CDS GCA 90 bp CGCTGCACGCCAGGGCCCCGGCTGCTGGCTCTGCGAGCGGCTGCCTaGGCGGCGCGGCGAGGCGAGATGGGCGAAGCTCCGGGAGTGCGC +
Preference number: 5 (lower is better)
Translates to: RCTPGPRLLALRAAA*AARRGEMGEAPGVR
Trigger: GCGCACTCCCGGAGCTTCGCCCATCTCGCCTCGCCGCGCCGCGCAGGCAGCCGCTCGCAGAGCCAGCAGCCGGGGCCCTGGCGTGCAGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299506.3
CDS GCA 90 bp CCCGCGCTGCACGCCAGGGCCCCGGCTGCTGGCTCTGCGAGCGGCTaGCTGCGCGGCGCGGCGAGGCGAGATGGGCGAAGCTCCGGGAGT +
Preference number: 5 (lower is better)
Translates to: PALHARAPAAGSASG*LRGAARRDGRSSGS
Trigger: ACTCCCGGAGCTTCGCCCATCTCGCCTCGCCGCGCCGCGCAGGCAGCCGCTCGCAGAGCCAGCAGCCGGGGCCCTGGCGTGCAGCGCGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299506.3
CDS CCA 90 bp TGCTGGCTCTGCGAGCGGCTGCCTGCGCGGCGCGGCGAGGCGAGATaGGCGAAGCTCCGGGAGTGCGCGGGTCGTGCGCGCGCGTGGAGG +
Preference number: 5 (lower is better)
Translates to: CWLCERLPARRGEAR*AKLRECAGRARAWR
Trigger: CCTCCACGCGCGCGCACGACCCGCGCACTCCCGGAGCTTCGCCCATCTCGCCTCGCCGCGCCGCGCAGGCAGCCGCTCGCAGAGCCAGCA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299506.3
CDS CCA 90 bp GGCCGTTCGCCCCCACCAGCTGCCGTCTCCCCTGCGTCCTGGGCGTaGTCTGACTGGCCCACAGTCAGAATCTGCACTGGGCCTTGGGCC +
Preference number: 5 (lower is better)
Translates to: GRSPPPAAVSPASWA*SDWPTVRICTGPWA
Trigger: GGCCCAAGGCCCAGTGCAGATTCTGACTGTGGGCCAGTCAGACCACGCCCAGGACGCAGGGGAGACGGCAGCTGGTGGGGGCGAACGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS CCA 90 bp CCGCTGGGCCGTTCGCCCCCACCAGCTGCCGTCTCCCCTGCGTCCTaGGCGTGGTCTGACTGGCCCACAGTCAGAATCTGCACTGGGCCT +
Preference number: 5 (lower is better)
Translates to: PLGRSPPPAAVSPAS*AWSDWPTVRICTGP
Trigger: AGGCCCAGTGCAGATTCTGACTGTGGGCCAGTCAGACCACGCCCAGGACGCAGGGGAGACGGCAGCTGGTGGGGGCGAACGGCCCAGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS CCA 90 bp TGGAGATGCCCTTCCTCTGCATCGTGGCACGGAGATCCTGCCCGCTaGGCCGTTCGCCCCCACCAGCTGCCGTCTCCCCTGCGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: WRCPSSASWHGDPAR*AVRPHQLPSPLRPG
Trigger: CCCAGGACGCAGGGGAGACGGCAGCTGGTGGGGGCGAACGGCCCAGCGGGCAGGATCTCCGTGCCACGATGCAGAGGAAGGGCATCTCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS GCA 90 bp ATGCTGCTGGAGATGCCCTTCCTCTGCATCGTGGCACGGAGATCCTaGCCGCTGGGCCGTTCGCCCCCACCAGCTGCCGTCTCCCCTGCG +
Preference number: 5 (lower is better)
Translates to: MLLEMPFLCIVARRS*PLGRSPPPAAVSPA
Trigger: CGCAGGGGAGACGGCAGCTGGTGGGGGCGAACGGCCCAGCGGGCAGGATCTCCGTGCCACGATGCAGAGGAAGGGCATCTCCAGCAGCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS TCA 90 bp GCCACCCTGGCCCCCTGCTGTAGCTGCCGCCTTGGTTCTCTTGGCTaGAGCTGGTGCTGTTGGGCGCGTGGCTCCCAGCTGCACACTGGC +
Preference number: 5 (lower is better)
Translates to: ATLAPCCSCRLGSLG*SWCCWARGSQLHTG
Trigger: GCCAGTGTGCAGCTGGGAGCCACGCGCCCAACAGCACCAGCTTCAGCCAAGAGAACCAAGGCGGCAGCTACAGCAGGGGGCCAGGGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS TCA 90 bp TTCGCCCCCACCAGCTGCCGTCTCCCCTGCGTCCTGGGCGTGGTCTaGCTGGCCCACAGTCAGAATCTGCACTGGGCCTTGGGCCTCAGA +
Preference number: 5 (lower is better)
Translates to: FAPTSCRLPCVLGVV*LAHSQNLHWALGLR
Trigger: TCTGAGGCCCAAGGCCCAGTGCAGATTCTGACTGTGGGCCAGTCAGACCACGCCCAGGACGCAGGGGAGACGGCAGCTGGTGGGGGCGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS CCA 90 bp CCCCCACCAGCTGCCGTCTCCCCTGCGTCCTGGGCGTGGTCTGACTaGCCCACAGTCAGAATCTGCACTGGGCCTTGGGCCTCAGACTTG +
Preference number: 5 (lower is better)
Translates to: PPPAAVSPASWAWSD*PTVRICTGPWASDL
Trigger: CAAGTCTGAGGCCCAAGGCCCAGTGCAGATTCTGACTGTGGGCCAGTCAGACCACGCCCAGGACGCAGGGGAGACGGCAGCTGGTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS CCA 90 bp CCTCGTCAAAGCTCATGCTGCTGGAGATGCCCTTCCTCTGCATCGTaGCACGGAGATCCTGCCCGCTGGGCCGTTCGCCCCCACCAGCTG +
Preference number: 5 (lower is better)
Translates to: PRQSSCCWRCPSSAS*HGDPARWAVRPHQL
Trigger: CAGCTGGTGGGGGCGAACGGCCCAGCGGGCAGGATCTCCGTGCCACGATGCAGAGGAAGGGCATCTCCAGCAGCATGAGCTTTGACGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS GCA 90 bp TCCTCATCCTCGTCAAAGCTCATGCTGCTGGAGATGCCCTTCCTCTaGATCGTGGCACGGAGATCCTGCCCGCTGGGCCGTTCGCCCCCA +
Preference number: 5 (lower is better)
Translates to: SSSSSKLMLLEMPFL*IVARRSCPLGRSPP
Trigger: TGGGGGCGAACGGCCCAGCGGGCAGGATCTCCGTGCCACGATGCAGAGGAAGGGCATCTCCAGCAGCATGAGCTTTGACGAGGATGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS CCA 90 bp TGGCTGAAGCTGGTGCTGTTGGGCGCGTGGCTCCCAGCTGCACACTaGCGAGTGAGTCGGCCTCTTGAACTTGGTAGCTGGTGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: WLKLVLLGAWLPAAH*RVSRPLELGSWCCH
Trigger: GTGGCAGCACCAGCTACCAAGTTCAAGAGGCCGACTCACTCGCCAGTGTGCAGCTGGGAGCCACGCGCCCAACAGCACCAGCTTCAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CAA 90 bp CATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGGCCGCCCATCTGCATaGGCCTGCACCATCAGGGGC +
Preference number: 5 (lower is better)
Translates to: HLAEGLYTEDRQGCLHRQGRPSA*ACTIRG
Trigger: GCCCCTGATGGTGCAGGCCAATGCAGATGGGCGGCC...CTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CAA 90 bp CAGAGATGTACGGCCGAGGTGTGGGCAGATCCTGCTAGGACAGGTATGCCTTGCCTGAAGCTGGTGCTGTaGGGCGCGTGGCTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: QRCTAEVWADPARTGMPCLKLVL*GAWLPA
Trigger: AGCTGGGAGCCACGCGCCCAACAGCACCAGCTTCAG...GCAAGGCATACCTGTCCTAGCAGGATCTGCCCACACCTCGGCCGTACATCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp CAGGATTCCCAGGCATGCCTAGCTGTGTGCAGTCAGGCTGGTGACCTGGACCCCCTCCCTCTATGCCTCTaGCGGCCTTCCCAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: QDSQACLAVCSQAGDLDPLPLCL*RPSQLK
Trigger: CTTCAGCTGGGAAGGCCGCAAGAGGCATAGAGGGAG...GGGGTCCAGGTCACCAGCCTGACTGCACACAGCTAGGCATGCCTGGGAATCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS CCA 90 bp CCTCATCATCTAAGACACTGTAGGGAATCCAGTCGGAATGCGGCTTaGAAGTCATGTCTCTCGGGGGCGGGGCGGTGGCTGCGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: PHHLRHCRESSRNAA*KSCLSGAGRWLRLW
Trigger: CCAGAGCCGCAGCCACCGCCCCGCCCCCGAGAGACATGACTTCCAAGCCGCATTCCGACTGGATTCCCTACAGTGTCTTAGATGATGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299506.3
CDS CCA 90 bp GTGCCTTTGTGCTTTCCCTTCTTCTCCTTCCTAGCGGCGCCACCCTaGCCCCCTGCTGTAGCTGCCGCCTTGGTTCTCTTGGCTGAAGCT +
Preference number: 5 (lower is better)
Translates to: VPLCFPFFSFLAAPP*PPAVAAALVLLAEA
Trigger: AGCTTCAGCCAAGAGAACCAAGGCGGCAGCTACAGCAGGGGGCCAGGGTGGCGCCGCTAGGAAGGAGAAGAAGGGAAAGCACAAAGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CAA 90 bp CAGGATTCCCAGGCATGCCTAGCTGTGTGCAGTCAGGCTGGTGACCTGGACCCCGCTGTAGCTGCCGCCTaGGTTCTCTTGGCTGAAGCT +
Preference number: 5 (lower is better)
Translates to: QDSQACLAVCSQAGDLDPAVAAA*VLLAEA
Trigger: AGCTTCAGCCAAGAGAACCAAGGCGGCAGCTACAGC...GGGGTCCAGGTCACCAGCCTGACTGCACACAGCTAGGCATGCCTGGGAATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp CTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCAAGCTTTGCCTGGACCTaGCTAGGGGGAGGGAGGGAC +
Preference number: 5 (lower is better)
Translates to: LAEGLYTEDRQGCLHRQASFAWT*LGGGRD
Trigger: GTCCCTCCCTCCCCCTAGCAAGGTCCAGGCAAAGCT...TGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp AAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACGGCCGCCCATCTGCATaGGCCTGCACCATCAGGGGC +
Preference number: 5 (lower is better)
Translates to: KLHLAEGLYTEDRQGCLHGRPSA*ACTIRG
Trigger: GCCCCTGATGGTGCAGGCCAATGCAGATGGGCGGCC...GTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CAA 90 bp TTACAGTTCCCAAGCCTGCAGGGTGGATGGTGCCATCCAAGGAGAAATAGCGGTGGCCGCCCATCTGCATaGGCCTGCACCATCAGGGGC +
Preference number: 5 (lower is better)
Translates to: LQFPSLQGGWCHPRRNSGGRPSA*ACTIRG
Trigger: GCCCCTGATGGTGCAGGCCAATGCAGATGGGCGGCC...ACCGCTATTTCTCCTTGGATGGCACCATCCACCCTGCAGGCTTGGGAACTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp GCCCCTACCTGCTGGAGTACCCATTGCCATCTGACTCCTTGGCTGAGCGGACGAGTCGGCCTCTTGAACTaGGTAGCTGGTGCTGCCACT +
Preference number: 5 (lower is better)
Translates to: APTCWSTHCHLTPWLSGRVGLLN*VAGAAT
Trigger: AGTGGCAGCACCAGCTACCAAGTTCAAGAGGCCGAC...TCGTCCGCTCAGCCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp CCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCCTGAAGCTGGTGCTGTaGGGCGCGTGGCTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: PTEGQSFIWRKAYIQRIGLKLVL*GAWLPA
Trigger: AGCTGGGAGCCACGCGCCCAACAGCACCAGCTTCAG...GCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CAA 90 bp CAGAGATGTACGGCCGAGGTGTGGGCAGATCCTGCTAGGACAGGTATGCCTTGCGGCCCGCTGGTGCCTTaGTGCTTTCCCTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: QRCTAEVWADPARTGMPCGPLVP*CFPFFS
Trigger: GGAGAAGAAGGGAAAGCACAAAGGCACCAGCGGGCC...GCAAGGCATACCTGTCCTAGCAGGATCTGCCCACACCTCGGCCGTACATCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp GGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACCTCAACGTCCACTGGTaGCTCTGGAGCTGTTGGGCT +
Preference number: 5 (lower is better)
Translates to: GPGSPLRAKASSGGRPIYLNVHW*LWSCWA
Trigger: AGCCCAACAGCTCCAGAGCAACCAGTGGACGTTGAG...GTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CAA 90 bp GGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACCGAGTGATGCGGCATTaGATGGTGATACCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: GPGSPLRAKASSGGRPIYRVMRH*MVIPWG
Trigger: CCCCCAGGGTATCACCATCAAATGCCGCATCACTCG...GTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CAA 90 bp TGGGGAGGGCATGCAGAATGGGCCCCCAGGAGGCCAGAGATACTAGTTTCTTGGTACTCGCACGCCAGCTaGCTGTCGAAGCTGGACAGG +
Preference number: 5 (lower is better)
Translates to: WGGHAEWAPRRPEILVSWYSHAS*LSKLDR
Trigger: CCTGTCCAGCTTCGACAGCAAGCTGGCGTGCGAGTA...CCAAGAAACTAGTATCTCTGGCCTCCTGGGGGCCCATTCTGCATGCCCTCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp CTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCATACTCGCACGCCAGCTaGCTGTCGAAGCTGGACAGG +
Preference number: 5 (lower is better)
Translates to: LAEGLYTEDRQGCLHRQAYSHAS*LSKLDR
Trigger: CCTGTCCAGCTTCGACAGCAAGCTGGCGTGCGAGTA...TGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS GCA 90 bp CCAGCAGGGCCCGCTGCCGATCAAGCTTCTGCTGCCTCAGGTTTCTaGCCTCATCATCTAAGACACGAGCGATCTCCCTTCCTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: PAGPAADQASAASGF*PHHLRHERSPFLPS
Trigger: GGAAGGAAGGAAGGGAGATCGCTCGTGTCTTAGATGATGAGGGCAGAAACCTGAGGCAGCAGAAGCTTGATCGGCAGCGGGCCCTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305253.8
CDS-3UTR CAA 90 bp CTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCACGGTCCATCCCTTTCTaGTCCCGAGTGATGCGGCAT +
Preference number: 5 (lower is better)
Translates to: LAEGLYTEDRQGCLHRQARSIPF*SRVMRH
Trigger: ATGCCGCATCACTCGGGACAAGAAAGGGATGGACCG...TGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CAA 90 bp GGGCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACCTGCTGGAGTACCCATaGCCATCTGACTCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: GPGSPLRAKASSGGRPIYLLEYP*PSDSLA
Trigger: AGCCAAGGAGTCAGATGGCAATGGGTACTCCAGCAG...GTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp GCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGAGGGTGTAGAGTTTaGGGGTGTGGCCCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: AREPTEGQSFIWRKAYIQRGCRV*GCGPRS
Trigger: GCTTCTGGGGCCACACCCCAAAACTCTACACCCTCT...CTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS CCA 90 bp CTAAGACACGAGCGATCTCCCTTCCTTCCTTCCAGTACTTCCTCCTaGTTGTTCTCCGATCTCTTCGGTGGCCCCGTTTCAGGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: LRHERSPFLPSSTSS*LFSDLFGGPVSGAQ
Trigger: CTGGGCCCCTGAAACGGGGCCACCGAAGAGATCGGAGAACAACCAGGAGGAAGTACTGGAAGGAAGGAAGGGAGATCGCTCGTGTCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305253.8
CDS-3UTR CAA 90 bp CCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGACAGTCGGAATGCGGCTaGGAAGTCATGTCTCTCGGG +
Preference number: 5 (lower is better)
Translates to: PGSPLRAKASSGGRPIYRQSECG*EVMSLG
Trigger: CCCGAGAGACATGACTTCCAAGCCGCATTCCGACTG...TCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299506.3
CDS-3UTR CAA 90 bp CACCTAGACCGAGAAGTGTGCAGCAGCCGTACTAAGGCCTGCTTACTGCTGAGTGGCCCGCTGGTGCCTTaGTGCTTTCCCTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: HLDREVCSSRTKACLLLSGPLVP*CFPFFS
Trigger: GGAGAAGAAGGGAAAGCACAAAGGCACCAGCGGGCC...ACTCAGCAGTAAGCAGGCCTTAGTACGGCTGCTGCACACTTCTCGGTCTAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp TTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCGGCCCGCTGGTGCCTTaGTGCTTTCCCTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: FIWRKAYIQRIGRAVSTGGPLVP*CFPFFS
Trigger: GGAGAAGAAGGGAAAGCACAAAGGCACCAGCGGGCC...GCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CAA 90 bp TGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCAGAATCTGCACTGGGCCTaGGGCCTCAGACTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: WRKAYIQRIGRAVSTGRQNLHWA*GLRLVF
Trigger: GAAGACAAGTCTGAGGCCCAAGGCCCAGTGCAGATT...CTGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CAA 90 bp CCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGACGGTCCATCCCTTTCTaGTCCCGAGTGATGCGGCAT +
Preference number: 5 (lower is better)
Translates to: PGSPLRAKASSGGRPIYRRSIPF*SRVMRH
Trigger: ATGCCGCATCACTCGGGACAAGAAAGGGATGGACCG...TCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CAA 90 bp CCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAAGTGTCTCATGCTCGTaGCGGGGGCGGATAGAGACT +
Preference number: 5 (lower is better)
Translates to: PGSPLRAKASSGGRPIYRSVSCS*RGRIET
Trigger: AGTCTCTATCCGCCCCCGCAACGAGCATGAGACACT...TCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CAA 90 bp CACATTCACTGTGCCCCTACCTGCTGGAGTACCCATTGCCATCTGACTCCTTGGTACTCGCACGCCAGCTaGCTGTCGAAGCTGGACAGG +
Preference number: 5 (lower is better)
Translates to: HIHCAPTCWSTHCHLTPWYSHAS*LSKLDR
Trigger: CCTGTCCAGCTTCGACAGCAAGCTGGCGTGCGAGTA...CCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGCACAGTGAATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp GCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGGGGTGGGAGTGTGTGTaGATCTCGTGGCATGGAAAG +
Preference number: 5 (lower is better)
Translates to: AREPTEGQSFIWRKAYIQGWECV*ISWHGK
Trigger: CTTTCCATGCCACGAGATCAACACACACTCCCACCC...CTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp CACCTAGACCGAGAAGTGTGCAGCAGCCGTACTAAGGCCTGCTTACTGCTGAGTCTCCCTCTATGCCTCTaGCGGCCTTCCCAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: HLDREVCSSRTKACLLLSLPLCL*RPSQLK
Trigger: CTTCAGCTGGGAAGGCCGCAAGAGGCATAGAGGGAG...ACTCAGCAGTAAGCAGGCCTTAGTACGGCTGCTGCACACTTCTCGGTCTAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp GGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTTGCCATCTGACTCCTaGGCTGAGCGGACGACTGGG +
Preference number: 5 (lower is better)
Translates to: GQSFIWRKAYIQRIGRAVLPSDS*AERTTG
Trigger: CCCAGTCGTCCGCTCAGCCAAGGAGTCAGATGGCAA...GACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp TGGGGAGGGCATGCAGAATGGGCCCCCAGGAGGCCAGAGATACTAGTTTCTTGGCTGCTGGAGTACCCATaGCCATCTGACTCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: WGGHAEWAPRRPEILVSWLLEYP*PSDSLA
Trigger: AGCCAAGGAGTCAGATGGCAATGGGTACTCCAGCAG...CCAAGAAACTAGTATCTCTGGCCTCCTGGGGGCCCATTCTGCATGCCCTCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS CCA 90 bp ATCCCTTTCTTGTCCCGAGTGATGCGGCATTTGATGGTGATACCCTaGGGGGCCGGCCTCAGTGCAAACTCCTCAAGATCCTGGACCTCA +
Preference number: 5 (lower is better)
Translates to: IPFLSRVMRHLMVIP*GAGLSANSSRSWTS
Trigger: TGAGGTCCAGGATCTTGAGGAGTTTGCACTGAGGCCGGCCCCCCAGGGTATCACCATCAAATGCCGCATCACTCGGGACAAGAAAGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS CCA 90 bp GTCCTGGCCCCCATCGTGGCCACAGGATGGAGTGGGTTTAAGGGATaGTCCCACTTCAGGCTGCATAGTAAGACCTGGAGCCTGTTGAAA +
Preference number: 5 (lower is better)
Translates to: VLAPIVATGWSGFKG*SHFRLHSKTWSLLK
Trigger: TTTCAACAGGCTCCAGGTCTTACTATGCAGCCTGAAGTGGGACCATCCCTTAAACCCACTCCATCCTGTGGCCACGATGGGGGCCAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305253.8
CDS-3UTR CAA 90 bp GGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTGCTGTAGCTGCCGCCTaGGTTCTCTTGGCTGAAGCT +
Preference number: 5 (lower is better)
Translates to: GPKLHLAEGLYTEDRQGCAVAAA*VLLAEA
Trigger: AGCTTCAGCCAAGAGAACCAAGGCGGCAGCTACAGC...ACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CAA 90 bp CACATTCACTGTGCCCCTACCTGCTGGAGTACCCATTGCCATCTGACTCCTTGGCTCAACGTCCACTGGTaGCTCTGGAGCTGTTGGGCT +
Preference number: 5 (lower is better)
Translates to: HIHCAPTCWSTHCHLTPWLNVHW*LWSCWA
Trigger: AGCCCAACAGCTCCAGAGCAACCAGTGGACGTTGAG...CCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGCACAGTGAATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp TGGGGAGGGCATGCAGAATGGGCCCCCAGGAGGCCAGAGATACTAGTTTCTTGGTTGGTGCCCATCAAGTaGGACCGCAGTTTCCCGATA +
Preference number: 5 (lower is better)
Translates to: WGGHAEWAPRRPEILVSWLVPIK*DRSFPI
Trigger: TATCGGGAAACTGCGGTCCAACTTGATGGGCACCAA...CCAAGAAACTAGTATCTCTGGCCTCCTGGGGGCCCATTCTGCATGCCCTCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp GGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTAGTGTCTCATGCTCGTaGCGGGGGCGGATAGAGACT +
Preference number: 5 (lower is better)
Translates to: GPKLHLAEGLYTEDRQGCSVSCS*RGRIET
Trigger: AGTCTCTATCCGCCCCCGCAACGAGCATGAGACACT...ACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CAA 90 bp AGGGCTTTCTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACGGAGCATGCCATGGCTaGGGAATGGTTCTCTGGCAG +
Preference number: 5 (lower is better)
Translates to: RAFCSCLRARLGHQALCYGACHG*GMVLWQ
Trigger: CTGCCAGAGAACCATTCCCAAGCCATGGCATGCTCC...GTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAGAAAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp CTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCACAGCCAACTCCCTCTTaGTGCTACAGGAGAAAGCAG +
Preference number: 5 (lower is better)
Translates to: LAEGLYTEDRQGCLHRQAQPTPS*CYRRKQ
Trigger: CTGCTTTCTCCTGTAGCACAAAGAGGGAGTTGGCTG...TGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp GGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCAGAGGGTGTAGAGTTTaGGGGTGTGGCCCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: GQSFIWRKAYIQRIGRAVRGCRV*GCGPRS
Trigger: GCTTCTGGGGCCACACCCCAAAACTCTACACCCTCT...GACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp CCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGACACCACTCTGCAGAATaGTTCTGGGGCAGAGGGTGT +
Preference number: 5 (lower is better)
Translates to: PGSPLRAKASSGGRPIYRHHSAE*FWGRGC
Trigger: ACACCCTCTGCCCCAGAACAATTCTGCAGAGTGGTG...TCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS TCA 90 bp AGCAGTGTCTCATGCTCGTTGCGGGGGCGGATAGAGACTCTCTCATaGACCATGTTCATGCCTGGGACAATCACGCTCATCTTCCGAGGC +
Preference number: 5 (lower is better)
Translates to: SSVSCSLRGRIETLS*TMFMPGTITLIFRG
Trigger: GCCTCGGAAGATGAGCGTGATTGTCCCAGGCATGAACATGGTTCATGAGAGAGTCTCTATCCGCCCCCGCAACGAGCATGAGACACTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS CCA 90 bp GACTTCCTGCTAGTAGCAGAGCTGGGGCGGGTGTTACTATTTAGCTaGGAGGAGCTGGAGCTATTCTCCTCCTCATCCTCCTCATCCTCG +
Preference number: 5 (lower is better)
Translates to: DFLLVAELGRVLLFS*EELELFSSSSSSSS
Trigger: CGAGGATGAGGAGGATGAGGAGGAGAATAGCTCCAGCTCCTCCCAGCTAAATAGTAACACCCGCCCCAGCTCTGCTACTAGCAGGAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS CCA 90 bp CAGAAAGAAGGCAAAGGTGTCCTGGCCCCCATCGTGGCCACAGGATaGAGTGGGTTTAAGGGATGGTCCCACTTCAGGCTGCATAGTAAG +
Preference number: 5 (lower is better)
Translates to: QKEGKGVLAPIVATG*SGFKGWSHFRLHSK
Trigger: CTTACTATGCAGCCTGAAGTGGGACCATCCCTTAAACCCACTCCATCCTGTGGCCACGATGGGGGCCAGGACACCTTTGCCTTCTTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305253.8
CDS CCA 90 bp AGAAAGAAACCCAGAAAGAAGGCAAAGGTGTCCTGGCCCCCATCGTaGCCACAGGATGGAGTGGGTTTAAGGGATGGTCCCACTTCAGGC +
Preference number: 5 (lower is better)
Translates to: RKKPRKKAKVSWPPS*PQDGVGLRDGPTSG
Trigger: GCCTGAAGTGGGACCATCCCTTAAACCCACTCCATCCTGTGGCCACGATGGGGGCCAGGACACCTTTGCCTTCTTTCTGGGTTTCTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305253.8
CDS-3UTR CAA 90 bp TTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAGAGAAGGGAAGGCCAGTGGCTGTAGCTGCCGCCTaGGTTCTCTTGGCTGAAGCT +
Preference number: 5 (lower is better)
Translates to: LTQGCRSWGKELEKGRPVAVAAA*VLLAEA
Trigger: AGCTTCAGCCAAGAGAACCAAGGCGGCAGCTACAGC...CACTGGCCTTCCCTTCTCTAATTCCTTACCCCAGCTGCGGCATCCCTGTGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp AAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACCGGTCCATCCCTTTCTaGTCCCGAGTGATGCGGCAT +
Preference number: 5 (lower is better)
Translates to: KLHLAEGLYTEDRQGCLHRSIPF*SRVMRH
Trigger: ATGCCGCATCACTCGGGACAAGAAAGGGATGGACCG...GTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CAA 90 bp GGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCGGGTGGGAGTGTGTGTaGATCTCGTGGCATGGAAAG +
Preference number: 5 (lower is better)
Translates to: GQSFIWRKAYIQRIGRAVGWECV*ISWHGK
Trigger: CTTTCCATGCCACGAGATCAACACACACTCCCACCC...GACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp TGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCAGATGCCTGACAGAGTTTaGTGGCTGAGGCTATCCTTC +
Preference number: 5 (lower is better)
Translates to: WRKAYIQRIGRAVSTGRQMPDRV*WLRLSF
Trigger: GAAGGATAGCCTCAGCCACAAAACTCTGTCAGGCAT...CTGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp CATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGGGCAAGAACTCTTATaGTGGGAGAGGCTGAACCCA +
Preference number: 5 (lower is better)
Translates to: HLAEGLYTEDRQGCLHRQGQELL*WERLNP
Trigger: TGGGTTCAGCCTCTCCCACAATAAGAGTTCTTGCCC...CTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp CTGAGCGGACGACTGGGCCACAGCAGCCCTGCAGTGTGCTTCCTCTCCCTCTATAAAGGAAAGCTAGACTaGGAGAAGAGTTGGGGAAGT +
Preference number: 5 (lower is better)
Translates to: LSGRLGHSSPAVCFLSLYKGKLD*EKSWGS
Trigger: ACTTCCCCAACTCTTCTCCAAGTCTAGCTTTCCTTT...ATAGAGGGAGAGGAAGCACACTGCAGGGCTGCTGTGGCCCAGTCGTCCGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp GCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGCCTAGCCATCCTAAGTaGCGTTCTAGGAAACTCTGG +
Preference number: 5 (lower is better)
Translates to: AREPTEGQSFIWRKAYIQPSHPK*RSRKLW
Trigger: CCAGAGTTTCCTAGAACGCAACTTAGGATGGCTAGG...CTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp CATACACAGTCTAGGCATTGTGAAAACTGGCTGTGTTCCCAGCAAGAGATACTGCTGAAGCTGGTGCTGTaGGGCGCGTGGCTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: HTQSRHCENWLCSQQEILLKLVL*GAWLPA
Trigger: AGCTGGGAGCCACGCGCCCAACAGCACCAGCTTCAG...CAGTATCTCTTGCTGGGAACACAGCCAGTTTTCACAATGCCTAGACTGTGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp GGGGAAGTGAACTTCACCACTCTGCAGAATTGTTCTGGGGCAGAGGGTGTAGAGAATCTGCACTGGGCCTaGGGCCTCAGACTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: GEVNFTTLQNCSGAEGVENLHWA*GLRLVF
Trigger: GAAGACAAGTCTGAGGCCCAAGGCCCAGTGCAGATT...CTCTACACCCTCTGCCCCAGAACAATTCTGCAGAGTGGTGAAGTTCACTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp TTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCTTGGTGCCCATCAAGTaGGACCGCAGTTTCCCGATA +
Preference number: 5 (lower is better)
Translates to: FIWRKAYIQRIGRAVSTGLVPIK*DRSFPI
Trigger: TATCGGGAAACTGCGGTCCAACTTGATGGGCACCAA...GCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CAA 90 bp GACGCACAGACACACACATACACAGACGGACACAGAGCACCTTGGAGCCAGAAGTCCCAGCTGAAGAGGTaGCTCAGCTTGGTAAGTACG +
Preference number: 5 (lower is better)
Translates to: DAQTHTYTDGHRAPWSQKSQLKR*LSLVST
Trigger: CGTACTTACCAAGCTGAGCAACCTCTTCAGCTGGGA...CTTCTGGCTCCAAGGTGCTCTGTGTCCGTCTGTGTATGTGTGTGTCTGTGCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp CAGGATTCCCAGGCATGCCTAGCTGTGTGCAGTCAGGCTGGTGACCTGGACCCCAGAAACTGGACCATGTaGCAAAAGCTAATCGTTGGA +
Preference number: 5 (lower is better)
Translates to: QDSQACLAVCSQAGDLDPRNWTM*QKLIVG
Trigger: TCCAACGATTAGCTTTTGCAACATGGTCCAGTTTCT...GGGGTCCAGGTCACCAGCCTGACTGCACACAGCTAGGCATGCCTGGGAATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp GACGCACAGACACACACATACACAGACGGACACAGAGCACCTTGGAGCCAGAAGCAGCCAACTCCCTCTTaGTGCTACAGGAGAAAGCAG +
Preference number: 5 (lower is better)
Translates to: DAQTHTYTDGHRAPWSQKQPTPS*CYRRKQ
Trigger: CTGCTTTCTCCTGTAGCACAAAGAGGGAGTTGGCTG...CTTCTGGCTCCAAGGTGCTCTGTGTCCGTCTGTGTATGTGTGTGTCTGTGCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp AGAACCTTTATGCACTCTCTCCCACCTAGACCGAGAAGTGTGCAGCAGCCGTACCACCACTCTGCAGAATaGTTCTGGGGCAGAGGGTGT +
Preference number: 5 (lower is better)
Translates to: RTFMHSLPPRPRSVQQPYHHSAE*FWGRGC
Trigger: ACACCCTCTGCCCCAGAACAATTCTGCAGAGTGGTG...GTACGGCTGCTGCACACTTCTCGGTCTAGGTGGGAGAGAGTGCATAAAGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS GCA 90 bp GGTGTCTTGTTTTGCAGCTCGATGATACTCTCCGTGTTCTTATTCTaGCAGCGTGCTAGCAGTGTCTCATGCTCGTTGCGGGGGCGGATA +
Preference number: 5 (lower is better)
Translates to: GVLFCSSMILSVFLF*QRASSVSCSLRGRI
Trigger: TATCCGCCCCCGCAACGAGCATGAGACACTGCTAGCACGCTGGCAGAATAAGAACACGGAGAGTATCATCGAGCTGCAAAACAAGACACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CAA 90 bp CTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACATAAAGTTCTCAACGTCCACTGGTaGCTCTGGAGCTGTTGGGCT +
Preference number: 5 (lower is better)
Translates to: LQLFKGQAWPPSPLLHKVLNVHW*LWSCWA
Trigger: AGCCCAACAGCTCCAGAGCAACCAGTGGACGTTGAG...AACTTTATGTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp AGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACATTGGTGCCCATCAAGTaGGACCGCAGTTTCCCGATA +
Preference number: 5 (lower is better)
Translates to: SFIWRKAYIQRIGRAVSTLVPIK*DRSFPI
Trigger: TATCGGGAAACTGCGGTCCAACTTGATGGGCACCAA...TGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS-3UTR CAA 90 bp TGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCAGAAGAGGTTGCTCAGCTaGGTAAGTACGACTACAACA +
Preference number: 5 (lower is better)
Translates to: WRKAYIQRIGRAVSTGRQKRLLS*VSTTTT
Trigger: TGTTGTAGTCGTACTTACCAAGCTGAGCAACCTCTT...CTGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp CATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGTTACCAACCATGACTaGGCTGACAGCAGTGAGAAA +
Preference number: 5 (lower is better)
Translates to: HLAEGLYTEDRQGCLHRQVTNHD*ADSSEK
Trigger: TTTCTCACTGCTGTCAGCCAAGTCATGGTTGGTAAC...CTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp AGAACCTTTATGCACTCTCTCCCACCTAGACCGAGAAGTGTGCAGCAGCCGTACAGGTACGACCCCTGCTaGCTTCCCACCAATTTCAGA +
Preference number: 5 (lower is better)
Translates to: RTFMHSLPPRPRSVQQPYRYDPC*LPTNFR
Trigger: TCTGAAATTGGTGGGAAGCAAGCAGGGGTCGTACCT...GTACGGCTGCTGCACACTTCTCGGTCTAGGTGGGAGAGAGTGCATAAAGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp GCCCCTACCTGCTGGAGTACCCATTGCCATCTGACTCCTTGGCTGAGCGGACGATTCTATAAGACCAACTaGCCTTTCCACTTGGTTGGA +
Preference number: 5 (lower is better)
Translates to: APTCWSTHCHLTPWLSGRFYKTN*PFHLVG
Trigger: TCCAACCAAGTGGAAAGGCAAGTTGGTCTTATAGAA...TCGTCCGCTCAGCCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp AGGGCTTTCTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACAAGACCTGGAGCCTGTaGAAATTCCCTGTATTCGCC +
Preference number: 5 (lower is better)
Translates to: RAFCSCLRARLGHQALCYKTWSL*KFPVFA
Trigger: GGCGAATACAGGGAATTTCAACAGGCTCCAGGTCTT...GTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAGAAAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305253.8
CDS-3UTR CAA 90 bp CCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCGTTTCCTGTGCTGCTTaGAATGCTGAGATCCCATGG +
Preference number: 5 (lower is better)
Translates to: PTEGQSFIWRKAYIQRIGVSCAA*NAEIPW
Trigger: CCATGGGATCTCAGCATTCAAAGCAGCACAGGAAAC...GCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305253.8
CDS-3UTR CAA 90 bp ATTCCCTCCCAAGAACCTACATGGTTACCAACCATGACTTGGCTGACAGCAGTGAATCTGCACTGGGCCTaGGGCCTCAGACTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: IPSQEPTWLPTMTWLTAVNLHWA*GLRLVF
Trigger: GAAGACAAGTCTGAGGCCCAAGGCCCAGTGCAGATT...CACTGCTGTCAGCCAAGTCATGGTTGGTAACCATGTAGGTTCTTGGGAGGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp GAAATTTGTGCTTGCATAACAGAGCCATGGAAATGGCTATCCCAGCATCTCCCCCGAGTGATGCGGCATTaGATGGTGATACCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: EICACITEPWKWLSQHLPRVMRH*MVIPWG
Trigger: CCCCCAGGGTATCACCATCAAATGCCGCATCACTCG...GGGGAGATGCTGGGATAGCCATTTCCATGGCTCTGTTATGCAAGCACAAATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp GTTACAGAGAAGCTGCCTAAACTCACTCCCAACTGCCCAATACCATTAGGGACTAGTGTCTCATGCTCGTaGCGGGGGCGGATAGAGACT +
Preference number: 5 (lower is better)
Translates to: VTEKLPKLTPNCPIPLGTSVSCS*RGRIET
Trigger: AGTCTCTATCCGCCCCCGCAACGAGCATGAGACACT...AGTCCCTAATGGTATTGGGCAGTTGGGAGTGAGTTTAGGCAGCTTCTCTGTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp AGGGCTTTCTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACTGGCCACCAAGCCCTTaGCTACATAAAGTTGATGTG +
Preference number: 5 (lower is better)
Translates to: RAFCSCLRARLGHQALCYWPPSP*LHKVDV
Trigger: CACATCAACTTTATGTAGCAAAGGGCTTGGTGGCCA...GTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAGAAAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp GAAATTTGTGCTTGCATAACAGAGCCATGGAAATGGCTATCCCAGCATCTCCCCGGAGCATGCCATGGCTaGGGAATGGTTCTCTGGCAG +
Preference number: 5 (lower is better)
Translates to: EICACITEPWKWLSQHLPGACHG*GMVLWQ
Trigger: CTGCCAGAGAACCATTCCCAAGCCATGGCATGCTCC...GGGGAGATGCTGGGATAGCCATTTCCATGGCTCTGTTATGCAAGCACAAATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp GGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTGTTACCAACCATGACTaGGCTGACAGCAGTGAGAAA +
Preference number: 5 (lower is better)
Translates to: GPKLHLAEGLYTEDRQGCVTNHD*ADSSEK
Trigger: TTTCTCACTGCTGTCAGCCAAGTCATGGTTGGTAAC...ACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp GCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGCATGGACCTTTTTCTTaGAAACCAACCCTGTCACTT +
Preference number: 5 (lower is better)
Translates to: AREPTEGQSFIWRKAYIQHGPFS*KPTLSL
Trigger: AAGTGACAGGGTTGGTTTCAAAGAAAAAGGTCCATG...CTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp GGGGAAGTGAACTTCACCACTCTGCAGAATTGTTCTGGGGCAGAGGGTGTAGAGCCTAGCCATCCTAAGTaGCGTTCTAGGAAACTCTGG +
Preference number: 5 (lower is better)
Translates to: GEVNFTTLQNCSGAEGVEPSHPK*RSRKLW
Trigger: CCAGAGTTTCCTAGAACGCAACTTAGGATGGCTAGG...CTCTACACCCTCTGCCCCAGAACAATTCTGCAGAGTGGTGAAGTTCACTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp CTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACATAAAGTTTCCCAGCTGAAGAGGTaGCTCAGCTTGGTAAGTACG +
Preference number: 5 (lower is better)
Translates to: LQLFKGQAWPPSPLLHKVSQLKR*LSLVST
Trigger: CGTACTTACCAAGCTGAGCAACCTCTTCAGCTGGGA...AACTTTATGTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp GGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCAAATGAGCAAAAGCTaGAGCTTACAGTTCCCAAGC +
Preference number: 5 (lower is better)
Translates to: GPKLHLAEGLYTEDRQGCQMSKS*SLQFPS
Trigger: GCTTGGGAACTGTAAGCTCAAGCTTTTGCTCATTTG...ACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp CACATTCACTGTGCCCCTACCTGCTGGAGTACCCATTGCCATCTGACTCCTTGGAAAGGAAAGCTAGACTaGGAGAAGAGTTGGGGAAGT +
Preference number: 5 (lower is better)
Translates to: HIHCAPTCWSTHCHLTPWKGKLD*EKSWGS
Trigger: ACTTCCCCAACTCTTCTCCAAGTCTAGCTTTCCTTT...CCAAGGAGTCAGATGGCAATGGGTACTCCAGCAGGTAGGGGCACAGTGAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp GCCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGCTTTGCTACATAAAGTaGATGTGGCCTTCATACATA +
Preference number: 5 (lower is better)
Translates to: AREPTEGQSFIWRKAYIQLCYIK*MWPSYI
Trigger: TATGTATGAAGGCCACATCAACTTTATGTAGCAAAG...CTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp AGAACCTTTATGCACTCTCTCCCACCTAGACCGAGAAGTGTGCAGCAGCCGTACAGAGATACTAGTTTCTaGGGGGACAGTGGGAACAAA +
Preference number: 5 (lower is better)
Translates to: RTFMHSLPPRPRSVQQPYRDTSF*GDSGNK
Trigger: TTTGTTCCCACTGTCCCCCAAGAAACTAGTATCTCT...GTACGGCTGCTGCACACTTCTCGGTCTAGGTGGGAGAGAGTGCATAAAGGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp GGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTAGAAACTGGACCATGTaGCAAAAGCTAATCGTTGGA +
Preference number: 5 (lower is better)
Translates to: GPKLHLAEGLYTEDRQGCRNWTM*QKLIVG
Trigger: TCCAACGATTAGCTTTTGCAACATGGTCCAGTTTCT...ACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp CTGCAGTTGTTTAAGGGCCAGGCTTGGCCACCAAGCCCTTTGCTACATAAAGTTATGCCTGACAGAGTTTaGTGGCTGAGGCTATCCTTC +
Preference number: 5 (lower is better)
Translates to: LQLFKGQAWPPSPLLHKVMPDRV*WLRLSF
Trigger: GAAGGATAGCCTCAGCCACAAAACTCTGTCAGGCAT...AACTTTATGTAGCAAAGGGCTTGGTGGCCAAGCCTGGCCCTTAAACAACTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp GTTACAGAGAAGCTGCCTAAACTCACTCCCAACTGCCCAATACCATTAGGGACTGGGCAAGAACTCTTATaGTGGGAGAGGCTGAACCCA +
Preference number: 5 (lower is better)
Translates to: VTEKLPKLTPNCPIPLGTGQELL*WERLNP
Trigger: TGGGTTCAGCCTCTCCCACAATAAGAGTTCTTGCCC...AGTCCCTAATGGTATTGGGCAGTTGGGAGTGAGTTTAGGCAGCTTCTCTGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp TGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCAGATTAAGAAACCTCAGTaGATTGCTGATTGCCCTTTT +
Preference number: 5 (lower is better)
Translates to: WRKAYIQRIGRAVSTGRQIKKPQ*IADCPF
Trigger: AAAAGGGCAATCAGCAATCAACTGAGGTTTCTTAAT...CTGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp TGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTCTCCACAGGCAGGCAGTGTAACATCTTTATCTaGTGGTTAGGAAAATGGACC +
Preference number: 5 (lower is better)
Translates to: WRKAYIQRIGRAVSTGRQCNIFI*WLGKWT
Trigger: GGTCCATTTTCCTAACCACAAGATAAAGATGTTACA...CTGCCTGCCTGTGGAGACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS CCA 90 bp CCTGTTGAAATTCCCTGTATTCGCCTCAGTACTGAAACCAGCACTTaGATGTCTCCCTTCATCACCGTGGCAACAGTCAGACTAACAACC +
Preference number: 5 (lower is better)
Translates to: PVEIPCIRLSTETST*MSPFITVATVRLTT
Trigger: GGTTGTTAGTCTGACTGTTGCCACGGTGATGAAGGGAGACATCCAAGTGCTGGTTTCAGTACTGAGGCGAATACAGGGAATTTCAACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305253.8
CDS CCA 90 bp AGTGGGTTTAAGGGATGGTCCCACTTCAGGCTGCATAGTAAGACCTaGAGCCTGTTGAAATTCCCTGTATTCGCCTCAGTACTGAAACCA +
Preference number: 5 (lower is better)
Translates to: SGFKGWSHFRLHSKT*SLLKFPVFASVLKP
Trigger: TGGTTTCAGTACTGAGGCGAATACAGGGAATTTCAACAGGCTCCAGGTCTTACTATGCAGCCTGAAGTGGGACCATCCCTTAAACCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305253.8
CDS-3UTR CAA 90 bp TCACCCTGTCCCATTCCCTCCCAAGAACCTACATGGTTACCAACCATGACTTGGCAAATGAGCAAAAGCTaGAGCTTACAGTTCCCAAGC +
Preference number: 5 (lower is better)
Translates to: SPCPIPSQEPTWLPTMTWQMSKS*SLQFPS
Trigger: GCTTGGGAACTGTAAGCTCAAGCTTTTGCTCATTTG...CCAAGTCATGGTTGGTAACCATGTAGGTTCTTGGGAGGGAATGGGACAGGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp TTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAGAGAAGGGAAGGCCAGTGCATGGACCTTTTTCTTaGAAACCAACCCTGTCACTT +
Preference number: 5 (lower is better)
Translates to: LTQGCRSWGKELEKGRPVHGPFS*KPTLSL
Trigger: AAGTGACAGGGTTGGTTTCAAAGAAAAAGGTCCATG...CACTGGCCTTCCCTTCTCTAATTCCTTACCCCAGCTGCGGCATCCCTGTGTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp CCAGGGAGCCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGATGTAACATCTTTATCTaGTGGTTAGGAAAATGGACC +
Preference number: 5 (lower is better)
Translates to: PGSPLRAKASSGGRPIYRCNIFI*WLGKWT
Trigger: GGTCCATTTTCCTAACCACAAGATAAAGATGTTACA...TCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGGCTCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp CCCACTGAGGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCCTTTGCTACATAAAGTaGATGTGGCCTTCATACATA +
Preference number: 5 (lower is better)
Translates to: PTEGQSFIWRKAYIQRIGLCYIK*MWPSYI
Trigger: TATGTATGAAGGCCACATCAACTTTATGTAGCAAAG...GCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCCTCAGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp GGGCCAAAGCTTCATCTGGCGGAAGGCCTATATACAGAGGATAGGCAGGGCTGTATTAAGAAACCTCAGTaGATTGCTGATTGCCCTTTT +
Preference number: 5 (lower is better)
Translates to: GPKLHLAEGLYTEDRQGCIKKPQ*IADCPF
Trigger: AAAAGGGCAATCAGCAATCAACTGAGGTTTCTTAAT...ACAGCCCTGCCTATCCTCTGTATATAGGCCTTCCGCCAGATGAAGCTTTGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp AAGCAAGGTACGACCCCTGCTTGCTTCCCACCAATTTCAGATCTCTATCTGGGCTTCTATAAGACCAACTaGCCTTTCCACTTGGTTGGA +
Preference number: 5 (lower is better)
Translates to: KQGTTPACFPPISDLYLGFYKTN*PFHLVG
Trigger: TCCAACCAAGTGGAAAGGCAAGTTGGTCTTATAGAA...GCCCAGATAGAGATCTGAAATTGGTGGGAAGCAAGCAGGGGTCGTACCTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp CATACACAGTCTAGGCATTGTGAAAACTGGCTGTGTTCCCAGCAAGAGATACTGAAGAGGTTGCTCAGCTaGGTAAGTACGACTACAACA +
Preference number: 5 (lower is better)
Translates to: HTQSRHCENWLCSQQEILKRLLS*VSTTTT
Trigger: TGTTGTAGTCGTACTTACCAAGCTGAGCAACCTCTT...CAGTATCTCTTGCTGGGAACACAGCCAGTTTTCACAATGCCTAGACTGTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp ATGAGAGCATATTACTTCTACTTAAGTCAAAACAAGTCCTTCACCTATAAAGCCCGAGTGATGCGGCATTaGATGGTGATACCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: MRAYYFYLSQNKSFTYKARVMRH*MVIPWG
Trigger: CCCCCAGGGTATCACCATCAAATGCCGCATCACTCG...GGCTTTATAGGTGAAGGACTTGTTTTGACTTAAGTAGAAGTAATATGCTCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp ATGAGAGCATATTACTTCTACTTAAGTCAAAACAAGTCCTTCACCTATAAAGCCAGGTACGACCCCTGCTaGCTTCCCACCAATTTCAGA +
Preference number: 5 (lower is better)
Translates to: MRAYYFYLSQNKSFTYKARYDPC*LPTNFR
Trigger: TCTGAAATTGGTGGGAAGCAAGCAGGGGTCGTACCT...GGCTTTATAGGTGAAGGACTTGTTTTGACTTAAGTAGAAGTAATATGCTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp ATGAGAGCATATTACTTCTACTTAAGTCAAAACAAGTCCTTCACCTATAAAGCCTGGCCACCAAGCCCTTaGCTACATAAAGTTGATGTG +
Preference number: 5 (lower is better)
Translates to: MRAYYFYLSQNKSFTYKAWPPSP*LHKVDV
Trigger: CACATCAACTTTATGTAGCAAAGGGCTTGGTGGCCA...GGCTTTATAGGTGAAGGACTTGTTTTGACTTAAGTAGAAGTAATATGCTCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS-3UTR CAA 90 bp ATGAGAGCATATTACTTCTACTTAAGTCAAAACAAGTCCTTCACCTATAAAGCCAGAGATACTAGTTTCTaGGGGGACAGTGGGAACAAA +
Preference number: 5 (lower is better)
Translates to: MRAYYFYLSQNKSFTYKARDTSF*GDSGNK
Trigger: TTTGTTCCCACTGTCCCCCAAGAAACTAGTATCTCT...GGCTTTATAGGTGAAGGACTTGTTTTGACTTAAGTAGAAGTAATATGCTCTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299506.3
ENST00000305253.8
CDS GCA 72 bp GGCGAGATGGGCGAAGCTCCGGGAGTGCGCGGGTCGTaGGCGCGCGTGGAGGCGGGGAGGCCGACCGCACCG +
Preference number: 6 (lower is better)
Translates to: GEMGEAPGVRGS*ARVEAGRPTAP
Trigger: CGGTGCGGTCGGCCTCCCCGCCTCCACGCGCGCGCACGACCCGCGCACTCCCGGAGCTTCGCCCATCTCGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299506.3
CDS CCA 72 bp TGCGAGCGGCTGCCTGCGCGGCGCGGCGAGGCGAGATaGGCGAAGCTCCGGGAGTGCGCGGGTCGTGCGCGC +
Preference number: 6 (lower is better)
Translates to: CERLPARRGEAR*AKLRECAGRAR
Trigger: GCGCGCACGACCCGCGCACTCCCGGAGCTTCGCCCATCTCGCCTCGCCGCGCCGCGCAGGCAGCCGCTCGCA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299506.3
CDS TCA 72 bp AGCTCCAGCGGCTGTAAGACAGGGTCCGGTGGCTGCTaGCTCCCTCCATCGCCGCCTCCGGCTCCGCTCGGG +
Preference number: 6 (lower is better)
Translates to: SSSGCKTGSGGC*LPPSPPPAPLG
Trigger: CCCGAGCGGAGCCGGAGGCGGCGATGGAGGGAGTCAGCAGCCACCGGACCCTGTCTTACAGCCGCTGGAGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534099.5
CDS CCA 72 bp CCTTCCTCTGCATCGTGGCACGGAGATCCTGCCCGCTaGGCCGTTCGCCCCCACCAGCTGCCGTCTCCCCTG +
Preference number: 6 (lower is better)
Translates to: PSSASWHGDPAR*AVRPHQLPSPL
Trigger: CAGGGGAGACGGCAGCTGGTGGGGGCGAACGGCCCAGCGGGCAGGATCTCCGTGCCACGATGCAGAGGAAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS CAA 90 bp GCGGCGCCACCCTGGCCCCCTGCTGTAGCTGCCGCCTTGGTTCTCTaGGCTGAAGCTGGTGCTGTTGGGCGCGTGGCTCCCAGCTGCACA +
Preference number: 6 (lower is better)
Translates to: AAPPWPPAVAAALVL*AEAGAVGRVAPSCT
Trigger: TGTGCAGCTGGGAGCCACGCGCCCAACAGCACCAGCTTCAGCCAAGAGAACCAAGGCGGCAGCTACAGCAGGGGGCCAGGGTGGCGCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS GCA 72 bp GAGATGCCCTTCCTCTGCATCGTGGCACGGAGATCCTaGCCGCTGGGCCGTTCGCCCCCACCAGCTGCCGTC +
Preference number: 6 (lower is better)
Translates to: EMPFLCIVARRS*PLGRSPPPAAV
Trigger: GACGGCAGCTGGTGGGGGCGAACGGCCCAGCGGGCAGGATCTCCGTGCCACGATGCAGAGGAAGGGCATCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS CAA 72 bp GCGGCGCCACCCTGGCCCCCTGCTGTAGCTGCCGCCTaGGTTCTCTTGGCTGAAGCTGGTGCTGTTGGGCGC +
Preference number: 6 (lower is better)
Translates to: AAPPWPPAVAAA*VLLAEAGAVGR
Trigger: GCGCCCAACAGCACCAGCTTCAGCCAAGAGAACCAAGGCGGCAGCTACAGCAGGGGGCCAGGGTGGCGCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS CAA 90 bp TCCTTCCTAGCGGCGCCACCCTGGCCCCCTGCTGTAGCTGCCGCCTaGGTTCTCTTGGCTGAAGCTGGTGCTGTTGGGCGCGTGGCTCCC +
Preference number: 6 (lower is better)
Translates to: SFLAAPPWPPAVAAA*VLLAEAGAVGRVAP
Trigger: GGGAGCCACGCGCCCAACAGCACCAGCTTCAGCCAAGAGAACCAAGGCGGCAGCTACAGCAGGGGGCCAGGGTGGCGCCGCTAGGAAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS CCA 72 bp GCTGCCGTCTCCCCTGCGTCCTGGGCGTGGTCTGACTaGCCCACAGTCAGAATCTGCACTGGGCCTTGGGCC +
Preference number: 6 (lower is better)
Translates to: AAVSPASWAWSD*PTVRICTGPWA
Trigger: GGCCCAAGGCCCAGTGCAGATTCTGACTGTGGGCCAGTCAGACCACGCCCAGGACGCAGGGGAGACGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS CCA 72 bp CCCCCACCAGCTGCCGTCTCCCCTGCGTCCTGGGCGTaGTCTGACTGGCCCACAGTCAGAATCTGCACTGGG +
Preference number: 6 (lower is better)
Translates to: PPPAAVSPASWA*SDWPTVRICTG
Trigger: CCCAGTGCAGATTCTGACTGTGGGCCAGTCAGACCACGCCCAGGACGCAGGGGAGACGGCAGCTGGTGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS CCA 72 bp CGTTCGCCCCCACCAGCTGCCGTCTCCCCTGCGTCCTaGGCGTGGTCTGACTGGCCCACAGTCAGAATCTGC +
Preference number: 6 (lower is better)
Translates to: RSPPPAAVSPAS*AWSDWPTVRIC
Trigger: GCAGATTCTGACTGTGGGCCAGTCAGACCACGCCCAGGACGCAGGGGAGACGGCAGCTGGTGGGGGCGAACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS CAA 72 bp CCCTGGCCCCCTGCTGTAGCTGCCGCCTTGGTTCTCTaGGCTGAAGCTGGTGCTGTTGGGCGCGTGGCTCCC +
Preference number: 6 (lower is better)
Translates to: PWPPAVAAALVL*AEAGAVGRVAP
Trigger: GGGAGCCACGCGCCCAACAGCACCAGCTTCAGCCAAGAGAACCAAGGCGGCAGCTACAGCAGGGGGCCAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS TCA 72 bp GCCCCCTGCTGTAGCTGCCGCCTTGGTTCTCTTGGCTaGAGCTGGTGCTGTTGGGCGCGTGGCTCCCAGCTG +
Preference number: 6 (lower is better)
Translates to: APCCSCRLGSLG*SWCCWARGSQL
Trigger: CAGCTGGGAGCCACGCGCCCAACAGCACCAGCTTCAGCCAAGAGAACCAAGGCGGCAGCTACAGCAGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS CCA 72 bp AGCTCATGCTGCTGGAGATGCCCTTCCTCTGCATCGTaGCACGGAGATCCTGCCCGCTGGGCCGTTCGCCCC +
Preference number: 6 (lower is better)
Translates to: SSCCWRCPSSAS*HGDPARWAVRP
Trigger: GGGGCGAACGGCCCAGCGGGCAGGATCTCCGTGCCACGATGCAGAGGAAGGGCATCTCCAGCAGCATGAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS TCA 72 bp ACCAGCTGCCGTCTCCCCTGCGTCCTGGGCGTGGTCTaGCTGGCCCACAGTCAGAATCTGCACTGGGCCTTG +
Preference number: 6 (lower is better)
Translates to: TSCRLPCVLGVV*LAHSQNLHWAL
Trigger: CAAGGCCCAGTGCAGATTCTGACTGTGGGCCAGTCAGACCACGCCCAGGACGCAGGGGAGACGGCAGCTGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS TCA 72 bp TGTTGGGCGCGTGGCTCCCAGCTGCACACTGGCGAGTaGGTCGGCCTCTTGAACTTGGTAGCTGGTGCTGCC +
Preference number: 6 (lower is better)
Translates to: CWARGSQLHTGE*VGLLNLVAGAA
Trigger: GGCAGCACCAGCTACCAAGTTCAAGAGGCCGACTCACTCGCCAGTGTGCAGCTGGGAGCCACGCGCCCAACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS GCA 72 bp TCGTCAAAGCTCATGCTGCTGGAGATGCCCTTCCTCTaGATCGTGGCACGGAGATCCTGCCCGCTGGGCCGT +
Preference number: 6 (lower is better)
Translates to: SSKLMLLEMPFL*IVARRSCPLGR
Trigger: ACGGCCCAGCGGGCAGGATCTCCGTGCCACGATGCAGAGGAAGGGCATCTCCAGCAGCATGAGCTTTGACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS CCA 72 bp TGCTTTCCCTTCTTCTCCTTCCTAGCGGCGCCACCCTaGCCCCCTGCTGTAGCTGCCGCCTTGGTTCTCTTG +
Preference number: 6 (lower is better)
Translates to: CFPFFSFLAAPP*PPAVAAALVLL
Trigger: CAAGAGAACCAAGGCGGCAGCTACAGCAGGGGGCCAGGGTGGCGCCGCTAGGAAGGAGAAGAAGGGAAAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS CAA 72 bp CAAAGGGCACGAAGAGGCCTCTACTCGCACGCCAGCTaGCTGTCGAAGCTGGACAGGGCAATGGCAAAGGCC +
Preference number: 6 (lower is better)
Translates to: QRARRGLYSHAS*LSKLDRAMAKA
Trigger: GGCCTTTGCCATTGCCCTGTCCAGCTTCGACAGCAAGCTGGCGTGCGAGTAGAGGCCTCTTCGTGCCCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS CCA 72 bp CCCAGAAAGAAGGCAAAGGTGTCCTGGCCCCCATCGTaGCCACAGGATGGAGTGGGTTTAAGGGATGGTCCC +
Preference number: 6 (lower is better)
Translates to: PRKKAKVSWPPS*PQDGVGLRDGP
Trigger: GGGACCATCCCTTAAACCCACTCCATCCTGTGGCCACGATGGGGGCCAGGACACCTTTGCCTTCTTTCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305253.8
CDS CAA 90 bp AGACACGAGCGATCTCCCTTCCTTCCTTCCAGTACTTCCTCCTGGTaGTTCTCCGATCTCTTCGGTGGCCCCGTTTCAGGGGCCCAGGTT +
Preference number: 6 (lower is better)
Translates to: RHERSPFLPSSTSSW*FSDLFGGPVSGAQV
Trigger: AACCTGGGCCCCTGAAACGGGGCCACCGAAGAGATCGGAGAACAACCAGGAGGAAGTACTGGAAGGAAGGAAGGGAGATCGCTCGTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305253.8
CDS CCA 72 bp TTGTCCCGAGTGATGCGGCATTTGATGGTGATACCCTaGGGGGCCGGCCTCAGTGCAAACTCCTCAAGATCC +
Preference number: 6 (lower is better)
Translates to: LSRVMRHLMVIP*GAGLSANSSRS
Trigger: GGATCTTGAGGAGTTTGCACTGAGGCCGGCCCCCCAGGGTATCACCATCAAATGCCGCATCACTCGGGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS GCA 72 bp TTCTGCTCCAGCAGGGCCCGCTGCCGATCAAGCTTCTaGTGCCTCAGGTTTCTGCCCTCATCATCTAAGACA +
Preference number: 6 (lower is better)
Translates to: FCSSRARCRSSF*CLRFLPSSSKT
Trigger: TGTCTTAGATGATGAGGGCAGAAACCTGAGGCAGCAGAAGCTTGATCGGCAGCGGGCCCTGCTGGAGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS GCA 72 bp CCCGCTGCCGATCAAGCTTCTGCTGCCTCAGGTTTCTaGCCTCATCATCTAAGACACGAGCGATCTCCCTTC +
Preference number: 6 (lower is better)
Translates to: PAADQASAASGF*PHHLRHERSPF
Trigger: GAAGGGAGATCGCTCGTGTCTTAGATGATGAGGGCAGAAACCTGAGGCAGCAGAAGCTTGATCGGCAGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305253.8
CDS CCA 72 bp CCTCATCCTCCTCATCCTCGTCAAAGCTCATGCTGCTaGAGATGCCCTTCCTCTGCATCGTGGCACGGAGAT +
Preference number: 6 (lower is better)
Translates to: PHPPHPRQSSCC*RCPSSASWHGD
Trigger: ATCTCCGTGCCACGATGCAGAGGAAGGGCATCTCCAGCAGCATGAGCTTTGACGAGGATGAGGAGGATGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS CCA 72 bp CCCATCGTGGCCACAGGATGGAGTGGGTTTAAGGGATaGTCCCACTTCAGGCTGCATAGTAAGACCTGGAGC +
Preference number: 6 (lower is better)
Translates to: PIVATGWSGFKG*SHFRLHSKTWS
Trigger: GCTCCAGGTCTTACTATGCAGCCTGAAGTGGGACCATCCCTTAAACCCACTCCATCCTGTGGCCACGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305253.8
CDS GCA 72 bp CCCGCTGCCGATCAAGCTTCTGCTGCCTCAGGTTTCTaGCCTCATCATCTAAGACACTGTCATAGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: PAADQASAASGF*PHHLRHCHSSS
Trigger: GCTGGAGCTATGACAGTGTCTTAGATGATGAGGGCAGAAACCTGAGGCAGCAGAAGCTTGATCGGCAGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534099.5
CDS CCA 72 bp CTAGTAGCAGAGCTGGGGCGGGTGTTACTATTTAGCTaGGAGGAGCTGGAGCTATTCTCCTCCTCATCCTCC +
Preference number: 6 (lower is better)
Translates to: LVAELGRVLLFS*EELELFSSSSS
Trigger: GGAGGATGAGGAGGAGAATAGCTCCAGCTCCTCCCAGCTAAATAGTAACACCCGCCCCAGCTCTGCTACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS CCA 72 bp GAGCGATCTCCCTTCCTTCCTTCCAGTACTTCCTCCTaGTTGTTCTCCGATCTCTTCGGTGGCCCCGTTTCA +
Preference number: 6 (lower is better)
Translates to: ERSPFLPSSTSS*LFSDLFGGPVS
Trigger: TGAAACGGGGCCACCGAAGAGATCGGAGAACAACCAGGAGGAAGTACTGGAAGGAAGGAAGGGAGATCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305253.8
CDS GCA 72 bp CCCGCTGCCGATCAAGCTTCTGCTGCCTCAGGTTTCTaGCCTCATCATCTAAGACACTGTAGGGAATCCAGT +
Preference number: 6 (lower is better)
Translates to: PAADQASAASGF*PHHLRHCRESS
Trigger: ACTGGATTCCCTACAGTGTCTTAGATGATGAGGGCAGAAACCTGAGGCAGCAGAAGCTTGATCGGCAGCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299506.3
CDS GCA 72 bp TTTTGCAGCTCGATGATACTCTCCGTGTTCTTATTCTaGCAGCGTGCTAGCAGTGTCTCATGCTCGTTGCGG +
Preference number: 6 (lower is better)
Translates to: FCSSMILSVFLF*QRASSVSCSLR
Trigger: CCGCAACGAGCATGAGACACTGCTAGCACGCTGGCAGAATAAGAACACGGAGAGTATCATCGAGCTGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299506.3
ENST00000305253.8
ENST00000534099.5
CDS CAA 90 bp AAGGGATGGTCCCACTTCAGGCTGCATAGTAAGACCTGGAGCCTGTaGAAATTCCCTGTATTCGCCTCAGTACTGAAACCAGCACTTGGA +
Preference number: 6 (lower is better)
Translates to: KGWSHFRLHSKTWSL*KFPVFASVLKPALG
Trigger: TCCAAGTGCTGGTTTCAGTACTGAGGCGAATACAGGGAATTTCAACAGGCTCCAGGTCTTACTATGCAGCCTGAAGTGGGACCATCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305253.8
CDS CCA 72 bp ATTCCCTGTATTCGCCTCAGTACTGAAACCAGCACTTaGATGTCTCCCTTCATCACCGTGGCAACAGTCAGA +
Preference number: 6 (lower is better)
Translates to: IPCIRLSTETST*MSPFITVATVR
Trigger: TCTGACTGTTGCCACGGTGATGAAGGGAGACATCCAAGTGCTGGTTTCAGTACTGAGGCGAATACAGGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305253.8
CDS CCA 72 bp AAGGGATGGTCCCACTTCAGGCTGCATAGTAAGACCTaGAGCCTGTTGAAATTCCCTGTATTCGCCTCAGTA +
Preference number: 6 (lower is better)
Translates to: KGWSHFRLHSKT*SLLKFPVFASV
Trigger: TACTGAGGCGAATACAGGGAATTTCAACAGGCTCCAGGTCTTACTATGCAGCCTGAAGTGGGACCATCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305253.8
CDS CAA 72 bp TCCCACTTCAGGCTGCATAGTAAGACCTGGAGCCTGTaGAAATTCCCTGTATTCGCCTCAGTACTGAAACCA +
Preference number: 6 (lower is better)
Translates to: SHFRLHSKTWSL*KFPVFASVLKP
Trigger: TGGTTTCAGTACTGAGGCGAATACAGGGAATTTCAACAGGCTCCAGGTCTTACTATGCAGCCTGAAGTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305253.8