RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTYH3 (Homo sapiens)

Ensembl gene IDs: ENSG00000136295

Ensembl transcript IDs: ENST00000258796.12, ENST00000400376.2, ENST00000403167.5, ENST00000407643.5, ENST00000429448.1, ENST00000477439.1, ENST00000498454.1

Found 761 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCCTGGCCTTGGCACAGGCATCGAGCCTCGAGGGCTGGGCTGGCTaGGCCAGGGCCGGGACCGGGAGGGGTAGCACGTCCGATCCTGAT +
Preference number: 1 (lower is better)
Translates to: PLALAQASSLEGWAG*ARAGTGRGSTSDPD
Trigger: ATCAGGATCGGACGTGCTACCCCTCCCGGTCCCGGCCCTGGCCCAGCCAGCCCAGCCCTCGAGGCTCGATGCCTGTGCCAAGGCCAGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR TCA 90 bp GTGGCGTGCAGGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTaGCCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACT +
Preference number: 1 (lower is better)
Translates to: VACRAGASAGSSVQV*PELAVRAQSPCVST
Trigger: AGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCCTGCACGCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR CCA 90 bp GAGCGTGCCGGGATAGTGGGTGGCGTGCAGGGCTGGGGCATCGGCTaGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACGGGCCCA +
Preference number: 1 (lower is better)
Translates to: ERAGIVGGVQGWGIG*QQRSGVTRVGGTGP
Trigger: TGGGCCCGTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCCTGCACGCCACCCACTATCCCGGCACGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR CCA 90 bp GCACGTGGGGTGGGTGGCTGCCGGGCGCGGTCTAGTGGCTGCCGCTaGAGTCAGGGCGAGGCTGGCTCGTGGCGAGGTATTTGGCTCTCA +
Preference number: 1 (lower is better)
Translates to: ARGVGGCRARSSGCR*SQGEAGSWRGIWLS
Trigger: TGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCCCTGACTCCAGCGGCAGCCACTAGACCGCGCCCGGCAGCCACCCACCCCACGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429448.1
3UTR GCA 90 bp GCCGGGCGGCAACAACACAGGTTGGGTGCGGCCAGGGCTTGTAGGTaGGGCGACCATCTGCAGAGGGAGCGTGCCGGGATAGTGGGTGGC +
Preference number: 1 (lower is better)
Translates to: AGRQQHRLGAARACR*GDHLQRERAGIVGG
Trigger: GCCACCCACTATCCCGGCACGCTCCCTCTGCAGATGGTCGCCGCACCTACAAGCCCTGGCCGCACCCAACCTGTGTTGTTGCCGCCCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR GCA 90 bp AGCGGCCCCAGCCGTGCCTGTGAACTAAGAAGGGGTCCACAGAAGTaGCGGGCGGGAGGAAGGAGAGCTGTGGAGGGAAGGGCCGGGCGG +
Preference number: 1 (lower is better)
Translates to: SGPSRACELRRGPQK*RAGGRRAVEGRAGR
Trigger: CCGCCCGGCCCTTCCCTCCACAGCTCTCCTTCCTCCCGCCCGGCACTTCTGTGGACCCCTTCTTAGTTCACAGGCACGGCTGGGGCCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR CCA 90 bp CGAACCAGACACAGCTGCCCAGTCTCTGGGTGGGGGAAGGGGGTTTaGCACCAAGAAGGCGGCCAGCACTGGGTGGCGGGTGAGCGGCCC +
Preference number: 1 (lower is better)
Translates to: RTRHSCPVSGWGKGV*HQEGGQHWVAGERP
Trigger: GGGCCGCTCACCCGCCACCCAGTGCTGGCCGCCTTCTTGGTGCCAAACCCCCTTCCCCCACCCAGAGACTGGGCAGCTGTGTCTGGTTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR TCA 90 bp CAGTGGCCAGCAGGCGCCAGCACAGAGCGGCCCCAGCCGTGCCTGTaGACTAAGAAGGGGTCCACAGAAGTGCCGGGCGGGAGGAAGGAG +
Preference number: 1 (lower is better)
Translates to: QWPAGASTERPQPCL*TKKGSTEVPGGRKE
Trigger: CTCCTTCCTCCCGCCCGGCACTTCTGTGGACCCCTTCTTAGTTCACAGGCACGGCTGGGGCCGCTCTGTGCTGGCGCCTGCTGGCCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR CCA 90 bp AGGGCCGGGACCGGGAGGGGTAGCACGTCCGATCCTGATGTGGGGTaGCTCTGCCCTCCACGGCGGGAAGCACAGCAAACATCGTACACT +
Preference number: 1 (lower is better)
Translates to: RAGTGRGSTSDPDVG*LCPPRREAQQTSYT
Trigger: AGTGTACGATGTTTGCTGTGCTTCCCGCCGTGGAGGGCAGAGCCACCCCACATCAGGATCGGACGTGCTACCCCTCCCGGTCCCGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR TCA 90 bp CCCTTGGGCTGCCTGTCGGTCTGTGGCACCCCCTGGAGCACCCCATaGAGAAACGCTACTGCAGCCTTGACTCCCAGACAGCTGCTCCGG +
Preference number: 1 (lower is better)
Translates to: PLGCLSVCGTPWSTP*RNATAALTPRQLLR
Trigger: CCGGAGCAGCTGTCTGGGAGTCAAGGCTGCAGTAGCGTTTCTTCATGGGGTGCTCCAGGGGGTGCCACAGACCGACAGGCAGCCCAAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR CCA 90 bp CACACCACGGTCAGGAGTCCCGAGACAGCACGAGGCTGGAAGCCCTaGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAG +
Preference number: 1 (lower is better)
Translates to: HTTVRSPETARGWKP*PHRLSRYVHSPGRQ
Trigger: CTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAGGGCTTCCAGCCTCGTGCTGTCTCGGGACTCCTGACCGTGGTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR GCA 90 bp GGGACCGGGAGGGGTAGCACGTCCGATCCTGATGTGGGGTGGCTCTaGCCTCCACGGCGGGAAGCACAGCAAACATCGTACACTAAAGCC +
Preference number: 1 (lower is better)
Translates to: GTGRGSTSDPDVGWL*PPRREAQQTSYTKA
Trigger: GGCTTTAGTGTACGATGTTTGCTGTGCTTCCCGCCGTGGAGGGCAGAGCCACCCCACATCAGGATCGGACGTGCTACCCCTCCCGGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR GCA 90 bp CCCAGGGAGGGGATGAGGACATTTCCGGTCCAGGTAGCTGCCGGCTaGTCTGGGAGGAAGAGCCATGCGTCTGTAAACTGCTGGGGCTGG +
Preference number: 1 (lower is better)
Translates to: PREGMRTFPVQVAAG*SGRKSHASVNCWGW
Trigger: CCAGCCCCAGCAGTTTACAGACGCATGGCTCTTCCTCCCAGAGCAGCCGGCAGCTACCTGGACCGGAAATGTCCTCATCCCCTCCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR GCA 90 bp GCCTGGCCCCAGGGAGGGGATGAGGACATTTCCGGTCCAGGTAGCTaGCGGCTGCTCTGGGAGGAAGAGCCATGCGTCTGTAAACTGCTG +
Preference number: 1 (lower is better)
Translates to: AWPQGGDEDISGPGS*RLLWEEEPCVCKLL
Trigger: CAGCAGTTTACAGACGCATGGCTCTTCCTCCCAGAGCAGCCGGCAGCTACCTGGACCGGAAATGTCCTCATCCCCTCCCTGGGGCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR CCA 90 bp GCACACACGCACACCACGGTCAGGAGTCCCGAGACAGCACGAGGCTaGAAGCCCTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCT +
Preference number: 1 (lower is better)
Translates to: AHTHTTVRSPETARG*KPWPHRLSRYVHSP
Trigger: AGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAGGGCTTCCAGCCTCGTGCTGTCTCGGGACTCCTGACCGTGGTGTGCGTGTGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR GCA 90 bp TTCACAGCCGGCTCGGGTCCAGCCCCTCAGGCCGGGCTCCTGGGATaGTGTACCTGTCATGGATGGAAATGGAACCAAGAAGGGAGGGAA +
Preference number: 1 (lower is better)
Translates to: FTAGSGPAPQAGLLG*CTCHGWKWNQEGRE
Trigger: TTCCCTCCCTTCTTGGTTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCTGGACCCGAGCCGGCTGTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR CCA 90 bp GGATGTTCACAGCCGGCTCGGGTCCAGCCCCTCAGGCCGGGCTCCTaGGATGCTGTACCTGTCATGGATGGAAATGGAACCAAGAAGGGA +
Preference number: 1 (lower is better)
Translates to: GCSQPARVQPLRPGS*DAVPVMDGNGTKKG
Trigger: TCCCTTCTTGGTTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCTGGACCCGAGCCGGCTGTGAACATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR CCA 90 bp ACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACTTCATaGGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCG +
Preference number: 1 (lower is better)
Translates to: TLKPKAPLGSLAPTS*GGDRGHRDLSPKPA
Trigger: CGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR CCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATaGGATGGAGTAGTTAGGAACACGGCACCGAAAACTCAGAACAAA +
Preference number: 1 (lower is better)
Translates to: GSRHQPDAPVGVARS*DGVVRNTAPKTQNK
Trigger: TTTGTTCTGAGTTTTCGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR CCA 90 bp AGCAAATGTTGCTTGGAACTCGAATTGCATAGTGAGATGGGTGGGTaGGCAATGGGCCAGGGGCTGCTCCCAACCAGGCCCATTCACTAC +
Preference number: 1 (lower is better)
Translates to: SKCCLELELHSEMGG*AMGQGLLPTRPIHY
Trigger: GTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTGGCCCATTGCCCACCCACCCATCTCACTATGCAATTCGAGTTCCAAGCAACATTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp CGTCTGGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTGGGTGGCCCAGGTGGAGTTGGCACGTGGGGTaGGTGGCTGCCGGGCGCGGT +
Preference number: 2 (lower is better)
Translates to: RLGQAWHGVRGSGGWPRWSWHVG*VAAGRG
Trigger: ACCGCGCCCGGCAGCCACCCACCCCACGTGCCAACT...CCACCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGCGTCTGGGGCAGGCCTaGCACGGCGTGCGAGGGTCC +
Preference number: 2 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWRLGQA*HGVRGS
Trigger: GGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGGCCTGCAGACGCGTCTaGGGCAGGCCTGGCACGGCG +
Preference number: 2 (lower is better)
Translates to: ASAPARTWAHTAGSGPARACRRV*GRPGTA
Trigger: CGCCGTGCCAGGCCTGCCCCAGACGCGTCTGCAGGC...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGGGTGGCGTGCAGGGCTaGGGCATCGGCTGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWGGVQG*GIGWQQ
Trigger: CTGCTGCCAGCCGATGCCCCAGCCCTGCACGCCACC...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR TCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGTGCAGGGCCCAGCCTTaGCCCCTGCACGTGGCCATC +
Preference number: 2 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWCRAQP*PLHVAI
Trigger: GATGGCCACGTGCAGGGGTCAAGGCTGGGCCCTGCA...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGAGTTGGCACGTGGGGTaGGTGGCTGCCGGGCGCGGT +
Preference number: 2 (lower is better)
Translates to: ASAPARTWAHTAGSGPARSWHVG*VAAGRG
Trigger: ACCGCGCCCGGCAGCCACCCACCCCACGTGCCAACT...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGCGTGCGAGGGTCCGGTaGGTGGCCCAGGTGGAAGCG +
Preference number: 2 (lower is better)
Translates to: ASAPARTWAHTAGSGPARRARVR*VAQVEA
Trigger: CGCTTCCACCTGGGCCACCCACCGGACCCTCGCACG...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp GGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACAGGCCTGGCACGGCGTaGGAGGGTCCGGTGGGTGGC +
Preference number: 2 (lower is better)
Translates to: GLGHRLAAAFRCDPSWRYRPGTA*EGPVGG
Trigger: GCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCT...GTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGCCCAGCCTTGACCCCTaGACGTGGCCATCCAGCTGC +
Preference number: 2 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWPSLDP*TWPSSC
Trigger: GCAGCTGGATGGCCACGTGCAGGGGTCAAGGCTGGG...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGGGTGGGTGGCCCAGGTaGAAGCGGCAGTGCTGGCAC +
Preference number: 2 (lower is better)
Translates to: ASAPARTWAHTAGSGPARGGWPR*KRQCWH
Trigger: GTGCCAGCACTGCCGCTTCCACCTGGGCCACCCACC...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACGCCTGCAGACGCGTCTaGGGCAGGCCTGGCACGGCG +
Preference number: 2 (lower is better)
Translates to: GLGHRLAAAFRCDPSWRYACRRV*GRPGTA
Trigger: CGCCGTGCCAGGCCTGCCCCAGACGCGTCTGCAGGC...GTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTAGGCCTGGCACGGCGTaGGAGGGTCCGGTGGGTGGC +
Preference number: 2 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSRPGTA*EGPVGG
Trigger: GCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCT...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp TCAGGTGTGACCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTGTCGTCTGGGGCAGGCCTaGCACGGCGTGCGAGGGTCC +
Preference number: 2 (lower is better)
Translates to: SGVTRVGGTGPEPLRLHCRLGQA*HGVRGS
Trigger: GGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG...ACAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGCAGCTGCCCAGTCTCTaGGTGGGGGAAGGGGGTTTG +
Preference number: 2 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWQLPSL*VGEGGL
Trigger: CAAACCCCCTTCCCCCACCCAGAGACTGGGCAGCTG...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGCCTGGAGAACTCCCCTaGCGGGTCAAGCCCAGAGGA +
Preference number: 2 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWPGELP*RVKPRG
Trigger: TCCTCTGGGCTTGACCCGCCAGGGGAGTTCTCCAGG...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGTCTGCAGAGGGAGCGTaGCGGGATAGTGGGTGGCGT +
Preference number: 2 (lower is better)
Translates to: ASAPARTWAHTAGSGPARSAEGA*RDSGWR
Trigger: ACGCCACCCACTATCCCGGCACGCTCCCTCTGCAGA...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGGCCAGGGCTTGTAGGTaGGGCGACCATCTGCAGAGG +
Preference number: 2 (lower is better)
Translates to: ASAPARTWAHTAGSGPARARACR*GDHLQR
Trigger: CCTCTGCAGATGGTCGCCGCACCTACAAGCCCTGGC...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGCGAACCAGACACAGCTaGCCAGTCTCTGGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: ASAPARTWAHTAGSGPARRTRHS*PVSGWG
Trigger: CCCCCACCCAGAGACTGGGCAGCTGTGTCTGGTTCG...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTGGAGAGAGGCCCTGCTaGAGGGGGCCTCTGGCAGCC +
Preference number: 2 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSGERPC*RGPLAA
Trigger: GGCTGCCAGAGGCCCCCTCCAGCAGGGCCTCTCTCC...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGGCCCGGGCTCCACGTaGCCCCTGCTGTCCACGGAG +
Preference number: 2 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGGPGST*PLLSTE
Trigger: CTCCGTGGACAGCAGGGGCCACGTGGAGCCCGGGCC...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTGAAGGCGGCCAGCACTaGGTGGCGGGTGAGCGGCCC +
Preference number: 2 (lower is better)
Translates to: GRRPRPQGPQSKARGRFIEGGQH*VAGERP
Trigger: GGGCCGCTCACCCGCCACCCAGTGCTGGCCGCCTTC...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGCTCAGGCCGGGCTCCTaGGATGCTGTACCTGTCATG +
Preference number: 2 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWLRPGS*DAVPVM
Trigger: CATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAG...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGGGTGCGGCGACCATCTaGAGAGGGAGCGTGCCGGGA +
Preference number: 2 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLGAATI*RGSVPG
Trigger: TCCCGGCACGCTCCCTCTGCAGATGGTCGCCGCACC...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTGCTCCACGTGGCCCCTaGTGTCCACGGAGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: GRRPRPQGPQSKARGRFIAPRGP*CPRRAG
Trigger: CCCAGCCCTCCGTGGACAGCAGGGGCCACGTGGAGC...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGGGGAAGTTGGCACGTaGGGTGGGTGGCTGCCGGGC +
Preference number: 2 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGGEVGT*GGWLPG
Trigger: GCCCGGCAGCCACCCACCCCACGTGCCAACTTCCCC...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGGTGGCGTGCAGGGCTaGGGCATCGGCTGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGGGVQG*GIGWQQ
Trigger: CTGCTGCCAGCCGATGCCCCAGCCCTGCACGCCACC...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTGAGGAAGGAGAGCTGTaGAGGGAAGGGCCGGGCGGC +
Preference number: 2 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSEEGEL*REGPGG
Trigger: GCCGCCCGGCCCTTCCCTCCACAGCTCTCCTTCCTC...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGGCAGAGATGAGCAGGTaGCACGTGTCCCTGTCCCTC +
Preference number: 2 (lower is better)
Translates to: ASAPARTWAHTAGSGPARAEMSR*HVSLSL
Trigger: GAGGGACAGGGACACGTGCCACCTGCTCATCTCTGC...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGCCCTCCACTGAGGTTTaGTCATGCCTGGGGAGCTCA +
Preference number: 2 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWPSTEV*SCLGSS
Trigger: TGAGCTCCCCAGGCATGACCAAACCTCAGTGGAGGG...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR TCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGAGCCGGCAGGAGGGGTaGGCCTGTGGGTGGGCGGGC +
Preference number: 2 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWSRQEG*ACGWAG
Trigger: GCCCGCCCACCCACAGGCTCACCCCTCCTGCCGGCT...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTGGTGCGGCGACCATCTaGAGAGGGAGCGTGCCGGGA +
Preference number: 2 (lower is better)
Translates to: GRRPRPQGPQSKARGRFIGAATI*RGSVPG
Trigger: TCCCGGCACGCTCCCTCTGCAGATGGTCGCCGCACC...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGCCCGCAGCCCCAGCCTaGCCTAGAGATGACAAATGT +
Preference number: 2 (lower is better)
Translates to: ASAPARTWAHTAGSGPARPAAPA*PRDDKC
Trigger: ACATTTGTCATCTCTAGGGCAGGCTGGGGCTGCGGG...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTTGCCGGGATAGTGGGTaGCGTGCAGGGCTGGGGCAT +
Preference number: 2 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSCRDSG*RAGLGH
Trigger: ATGCCCCAGCCCTGCACGCCACCCACTATCCCGGCA...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTGTCCCTGTCCCTCAGTaGCCAGCAGGCGCCAGCACA +
Preference number: 2 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSVPVPQ*PAGAST
Trigger: TGTGCTGGCGCCTGCTGGCCACTGAGGGACAGGGAC...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTCTGCCTGTCGGTCTGTaGCACCCCCTGGAGCACCCC +
Preference number: 2 (lower is better)
Translates to: GRRPRPQGPQSKARGRFILPVGL*HPLEHP
Trigger: GGGGTGCTCCAGGGGGTGCCACAGACCGACAGGCAG...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTGGGTGTCCAGGCCCTTaGGCTGCCTGTCGGTCTGTG +
Preference number: 2 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSGCPGP*AACRSV
Trigger: CACAGACCGACAGGCAGCCCAAGGGCCTGGACACCC...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGGCTGCCCCTGGCCTTaGCACAGGCATCGAGCCTCG +
Preference number: 2 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGGCPWP*HRHRAS
Trigger: CGAGGCTCGATGCCTGTGCCAAGGCCAGGGGCAGCC...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGCGGTCGCAGGGCGTTTaGCGGGCACCCACGCCAGGG +
Preference number: 2 (lower is better)
Translates to: APVGVARSWDGVVRNTAPRSQGV*RAPTPG
Trigger: CCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGACCG...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR TCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTAGCAGCGTTCAGGTGTaGCCCGAGTTGGCGGTACGG +
Preference number: 2 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSSSVQV*PELAVR
Trigger: CCGTACCGCCAACTCGGGTCACACCTGAACGCTGCT...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR TCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGAGCAGCGTTCAGGTGTaGCCCGAGTTGGCGGTACGG +
Preference number: 2 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLSSVQV*PELAVR
Trigger: CCGTACCGCCAACTCGGGTCACACCTGAACGCTGCT...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR TCA 90 bp ACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGGAGGCACTGGGTGGCGGGTaGGCGGCCCGGGCTCCACGT +
Preference number: 2 (lower is better)
Translates to: TLVSRKSQTGTHAHHGQEALGGG*AARAPR
Trigger: ACGTGGAGCCCGGGCCGCTCACCCGCCACCCAGTGC...CTCCTGACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAAGGTGGAAGCGGCAGTaGTGGCACGGGGAGGGGAAG +
Preference number: 2 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGRWKRQ*WHGEGK
Trigger: CTTCCCCTCCCCGTGCCAGCACTGCCGCTTCCACCT...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTTCTGCAGAGGGAGCGTaGCGGGATAGTGGGTGGCGT +
Preference number: 2 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSSAEGA*RDSGWR
Trigger: ACGCCACCCACTATCCCGGCACGCTCCCTCTGCAGA...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGGCTCCACGTGGCCCCTaGTGTCCACGGAGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: APVGVARSWDGVVRNTAPAPRGP*CPRRAG
Trigger: CCCAGCCCTCCGTGGACAGCAGGGGCCACGTGGAGC...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGCGAACCAGACACAGCTaGCCAGTCTCTGGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLRTRHS*PVSGWG
Trigger: CCCCCACCCAGAGACTGGGCAGCTGTGTCTGGTTCG...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGCCCAGCCTTGACCCCTaGACGTGGCCATCCAGCTGC +
Preference number: 2 (lower is better)
Translates to: LASPPLTLCPFTWQAASRPSLDP*TWPSSC
Trigger: GCAGCTGGATGGCCACGTGCAGGGGTCAAGGCTGGG...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp GGGGTGGGTGGCTGCCGGGCGCGGTCTAGTGGCTGCCGCTGGAGTCAGGGCGAGGGTATTTGGCTCTCATaGTGGAGGTGTACTGTCGCT +
Preference number: 2 (lower is better)
Translates to: GVGGCRARSSGCRWSQGEGIWLS*WRCTVA
Trigger: AGCGACAGTACACCTCCAGCATGAGAGCCAAATACC...CTCGCCCTGACTCCAGCGGCAGCCACTAGACCGCGCCCGGCAGCCACCCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429448.1
3UTR-3UTR CCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGTGGAAGCGGCAGTGCTaGCACGGGGAGGGGAAGTTG +
Preference number: 2 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLWKRQC*HGEGKL
Trigger: CAACTTCCCCTCCCCGTGCCAGCACTGCCGCTTCCA...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGCGTGCGAGGGTCCGGTaGGTGGCCCAGGTGGAAGCG +
Preference number: 2 (lower is better)
Translates to: APVGVARSWDGVVRNTAPRARVR*VAQVEA
Trigger: CGCTTCCACCTGGGCCACCCACCGGACCCTCGCACG...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAACGTCTGGGGCAGGCCTaGCACGGCGTGCGAGGGTCC +
Preference number: 2 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMERLGQA*HGVRGS
Trigger: GGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAAGGTGTGACCCGAGTTaGCGGTACGGGCCCAGAGCC +
Preference number: 2 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGRCDPS*RYGPRA
Trigger: GGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCT...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTGGCTGGGGCATCGGCTaGCAGCAGCGTTCAGGTGTG +
Preference number: 2 (lower is better)
Translates to: GRRPRPQGPQSKARGRFIGWGIG*QQRSGV
Trigger: CACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCC...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTCCCTGTCCCTCAGTaGCCAGCAGGCGCCAGCACA +
Preference number: 2 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGVPVPQ*PAGAST
Trigger: TGTGCTGGCGCCTGCTGGCCACTGAGGGACAGGGAC...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGGGCACTGCAGAGAGATaGGCACGTGGAGGGACCACG +
Preference number: 2 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLGTAER*ARGGTT
Trigger: CGTGGTCCCTCCACGTGCCCATCTCTCTGCAGTGCC...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGGGAGAGAGGCCCTGCTaGAGGGGGCCTCTGGCAGCC +
Preference number: 2 (lower is better)
Translates to: APVGVARSWDGVVRNTAPGERPC*RGPLAA
Trigger: GGCTGCCAGAGGCCCCCTCCAGCAGGGCCTCTCTCC...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAAGGCCCGGGCTCCACGTaGCCCCTGCTGTCCACGGAG +
Preference number: 2 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMEGPGST*PLLSTE
Trigger: CTCCGTGGACAGCAGGGGCCACGTGGAGCCCGGGCC...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTTGGGGGAAGGGGGTTTaGCACCAAGAAGGCGGCCAG +
Preference number: 2 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSWGKGV*HQEGGQ
Trigger: CTGGCCGCCTTCTTGGTGCCAAACCCCCTTCCCCCA...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTCAGCTGCCCAGTCTCTaGGTGGGGGAAGGGGGTTTG +
Preference number: 2 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSQLPSL*VGEGGL
Trigger: CAAACCCCCTTCCCCCACCCAGAGACTGGGCAGCTG...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGGGGGCAGCACCTGCCTaGGGAGGGGTGTCCAGGCCC +
Preference number: 2 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWGAAPA*GGVSRP
Trigger: GGGCCTGGACACCCCTCCCCAGGCAGGTGCTGCCCC...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR TCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTACCTCAGGGCAGAGATaGGCAGGTGGCACGTGTCCC +
Preference number: 2 (lower is better)
Translates to: GRRPRPQGPQSKARGRFITSGQR*AGGTCP
Trigger: GGGACACGTGCCACCTGCTCATCTCTGCCCTGAGGT...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR TCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGTGCAGGGCCCAGCCTTaGCCCCTGCACGTGGCCATC +
Preference number: 2 (lower is better)
Translates to: APVGVARSWDGVVRNTAPCRAQP*PLHVAI
Trigger: GATGGCCACGTGCAGGGGTCAAGGCTGGGCCCTGCA...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAACGGGCCCAGAGCCCCTaGGTCTCCACTGTGCCCCTG +
Preference number: 2 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMERAQSP*VSTVPL
Trigger: CAGGGGCACAGTGGAGACGCAGGGGCTCTGGGCCCG...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGCGGGCCCAGAGCCCCTaGGTCTCCACTGTGCCCCTG +
Preference number: 2 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWRAQSP*VSTVPL
Trigger: CAGGGGCACAGTGGAGACGCAGGGGCTCTGGGCCCG...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGGGTGCGGCGACCATCTaGAGAGGGAGCGTGCCGGGA +
Preference number: 2 (lower is better)
Translates to: APVGVARSWDGVVRNTAPGAATI*RGSVPG
Trigger: TCCCGGCACGCTCCCTCTGCAGATGGTCGCCGCACC...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGGCCAGGGCTTGTAGGTaGGGCGACCATCTGCAGAGG +
Preference number: 2 (lower is better)
Translates to: LASPPLTLCPFTWQAASRARACR*GDHLQR
Trigger: CCTCTGCAGATGGTCGCCGCACCTACAAGCCCTGGC...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTAGGCGAGGAGGGCACTaGAGAGAGATGGGCACGTGG +
Preference number: 2 (lower is better)
Translates to: GRRPRPQGPQSKARGRFIRRGGH*REMGTW
Trigger: CCACGTGCCCATCTCTCTGCAGTGCCCTCCTCGCCT...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGAGGCGAGGAGGGCACTaGAGAGAGATGGGCACGTGG +
Preference number: 2 (lower is better)
Translates to: LASPPLTLCPFTWQAASRRRGGH*REMGTW
Trigger: CCACGTGCCCATCTCTCTGCAGTGCCCTCCTCGCCT...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGGCCGGGCTCCTGGGATaGTGTACCTGTCATGGATGG +
Preference number: 2 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLAGLLG*CTCHGW
Trigger: CCATCCATGACAGGTACAGCATCCCAGGAGCCCGGC...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGACGTGGCCATCCAGCTaGCCTCTGGCTGCCCCTGGC +
Preference number: 2 (lower is better)
Translates to: APVGVARSWDGVVRNTAPTWPSS*PLAAPG
Trigger: GCCAGGGGCAGCCAGAGGGCAGCTGGATGGCCACGT...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAAAGTTGGCACGTGGGGTaGGTGGCTGCCGGGCGCGGT +
Preference number: 2 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMESWHVG*VAAGRG
Trigger: ACCGCGCCCGGCAGCCACCCACCCCACGTGCCAACT...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAAGGGGAAGTTGGCACGTaGGGTGGGTGGCTGCCGGGC +
Preference number: 2 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMEGEVGT*GGWLPG
Trigger: GCCCGGCAGCCACCCACCCCACGTGCCAACTTCCCC...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGGGAGAGAGGCCCTGCTaGAGGGGGCCTCTGGCAGCC +
Preference number: 2 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWGERPC*RGPLAA
Trigger: GGCTGCCAGAGGCCCCCTCCAGCAGGGCCTCTCTCC...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTCTCAGGCCGGGCTCCTaGGATGCTGTACCTGTCATG +
Preference number: 2 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSLRPGS*DAVPVM
Trigger: CATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAG...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGCTCGCTCCCACTTCATaGGGAGGAGACCGAGGCCAC +
Preference number: 2 (lower is better)
Translates to: LASPPLTLCPFTWQAASRLAPTS*GGDRGH
Trigger: GTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAG...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR TCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTGCACTGGGTGGCGGGTaGGCGGCCCGGGCTCCACGT +
Preference number: 2 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGALGGG*AARAPR
Trigger: ACGTGGAGCCCGGGCCGCTCACCCGCCACCCAGTGC...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR TCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTACGCTACTGCAGCCTTaGCTCCCAGACAGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: GRRPRPQGPQSKARGRFITLLQP*LPDSCS
Trigger: GGAGCAGCTGTCTGGGAGTCAAGGCTGCAGTAGCGT...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR TCA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGCCCTGGAGCACCCCATaGAGAAACGCTACTGCAGCC +
Preference number: 2 (lower is better)
Translates to: LASPPLTLCPFTWQAASRPWSTP*RNATAA
Trigger: GGCTGCAGTAGCGTTTCTTCATGGGGTGCTCCAGGG...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR TCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGACCCTGGAGCACCCCATaGAGAAACGCTACTGCAGCC +
Preference number: 2 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGPWSTP*RNATAA
Trigger: GGCTGCAGTAGCGTTTCTTCATGGGGTGCTCCAGGG...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAAGGTGGGTGGCCCAGGTaGAAGCGGCAGTGCTGGCAC +
Preference number: 2 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMEGGWPR*KRQCWH
Trigger: GTGCCAGCACTGCCGCTTCCACCTGGGCCACCCACC...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGAGGTGTGACCCGAGTTaGCGGTACGGGCCCAGAGCC +
Preference number: 2 (lower is better)
Translates to: APVGVARSWDGVVRNTAPRCDPS*RYGPRA
Trigger: GGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCT...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGGAGGAAGGAGAGCTGTaGAGGGAAGGGCCGGGCGGC +
Preference number: 2 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWEEGEL*REGPGG
Trigger: GCCGCCCGGCCCTTCCCTCCACAGCTCTCCTTCCTC...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGGGGTGTCCAGGCCCTTaGGCTGCCTGTCGGTCTGTG +
Preference number: 2 (lower is better)
Translates to: APVGVARSWDGVVRNTAPGCPGP*AACRSV
Trigger: CACAGACCGACAGGCAGCCCAAGGGCCTGGACACCC...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR TCA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGCAGCATTTGTGCTTCTaGGCGGTCGCAGGGCGTTTG +
Preference number: 2 (lower is better)
Translates to: LASPPLTLCPFTWQAASRQHLCF*AVAGRL
Trigger: CAAACGCCCTGCGACCGCTCAGAAGCACAAATGCTG...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAAAGGTGGAAGCGGCAGTaGTGGCACGGGGAGGGGAAG +
Preference number: 2 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMERWKRQ*WHGEGK
Trigger: CTTCCCCTCCCCGTGCCAGCACTGCCGCTTCCACCT...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGGATGTGGGGTGGCTCTaGCCTCCACGGCGGGAAGCA +
Preference number: 2 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWDVGWL*PPRREA
Trigger: TGCTTCCCGCCGTGGAGGGCAGAGCCACCCCACATC...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGCCCAGCCTTGACCCCTaGACGTGGCCATCCAGCTGC +
Preference number: 2 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWPSLDP*TWPSSC
Trigger: GCAGCTGGATGGCCACGTGCAGGGGTCAAGGCTGGG...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp ACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGGAGGGTGGGTGGCCCAGGTaGAAGCGGCAGTGCTGGCAC +
Preference number: 2 (lower is better)
Translates to: TLVSRKSQTGTHAHHGQEGGWPR*KRQCWH
Trigger: GTGCCAGCACTGCCGCTTCCACCTGGGCCACCCACC...CTCCTGACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTGAAGGCGGCCAGCACTaGGTGGCGGGTGAGCGGCCC +
Preference number: 2 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGEGGQH*VAGERP
Trigger: GGGCCGCTCACCCGCCACCCAGTGCTGGCCGCCTTC...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGGATCCTGATGTGGGGTaGCTCTGCCCTCCACGGCGG +
Preference number: 2 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWDPDVG*LCPPRR
Trigger: CCGCCGTGGAGGGCAGAGCCACCCCACATCAGGATC...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCGGTCGCAGGGCGTTTaGCGGGCACCCACGCCAGGG +
Preference number: 2 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGRSQGV*RAPTPG
Trigger: CCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGACCG...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGACTATGTCCATTCACCTaGCAGGCAGCCTCACGGCCA +
Preference number: 2 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGLCPFT*QAASRP
Trigger: TGGCCGTGAGGCTGCCTGCCAGGTGAATGGACATAG...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp ACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGGAGCGAGGCTGGAAGCCCTaGCCTCACCGCCTCTCACGC +
Preference number: 2 (lower is better)
Translates to: TLVSRKSQTGTHAHHGQERGWKP*PHRLSR
Trigger: GCGTGAGAGGCGGTGAGGCCAGGGCTTCCAGCCTCG...CTCCTGACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR TCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGACCTCAGGGCAGAGATaGGCAGGTGGCACGTGTCCC +
Preference number: 2 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWTSGQR*AGGTCP
Trigger: GGGACACGTGCCACCTGCTCATCTCTGCCCTGAGGT...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR TCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAAACCTCAGGGCAGAGATaGGCAGGTGGCACGTGTCCC +
Preference number: 2 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMETSGQR*AGGTCP
Trigger: GGGACACGTGCCACCTGCTCATCTCTGCCCTGAGGT...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTGGAGGGCAAGCGGCCTaGAGACGCGTCTGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGGGQAA*RRVWGR
Trigger: CCTGCCCCAGACGCGTCTGCAGGCCGCTTGCCCTCC...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCGGGCCCAGAGCCCCTaGGTCTCCACTGTGCCCCTG +
Preference number: 2 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGRAQSP*VSTVPL
Trigger: CAGGGGCACAGTGGAGACGCAGGGGCTCTGGGCCCG...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTGCTCCACGTGGCCCCTaGTGTCCACGGAGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGAPRGP*CPRRAG
Trigger: CCCAGCCCTCCGTGGACAGCAGGGGCCACGTGGAGC...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGATGGGAGGAAGAGCCATaGGTCTGTAAACTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGWEEEP*VCKLLG
Trigger: CCCCAGCAGTTTACAGACGCATGGCTCTTCCTCCCA...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGCCCTGGGGTAGTGGATaGCTGCTGGGGAGCACTCTC +
Preference number: 2 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWPWGSG*LLGSTL
Trigger: GAGAGTGCTCCCCAGCAGGCATCCACTACCCCAGGG...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp ACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGGAGGGCTGGGGCATCGGCTaGCAGCAGCGTTCAGGTGTG +
Preference number: 2 (lower is better)
Translates to: TLVSRKSQTGTHAHHGQEGWGIG*QQRSGV
Trigger: CACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCC...CTCCTGACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp ACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGGAGTGCCGGGATAGTGGGTaGCGTGCAGGGCTGGGGCAT +
Preference number: 2 (lower is better)
Translates to: TLVSRKSQTGTHAHHGQECRDSG*RAGLGH
Trigger: ATGCCCCAGCCCTGCACGCCACCCACTATCCCGGCA...CTCCTGACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR TCA 90 bp ACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGGAGAGCAGCGTTCAGGTGTaGCCCGAGTTGGCGGTACGG +
Preference number: 2 (lower is better)
Translates to: TLVSRKSQTGTHAHHGQESSVQV*PELAVR
Trigger: CCGTACCGCCAACTCGGGTCACACCTGAACGCTGCT...CTCCTGACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp ACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGGAGCGAACCAGACACAGCTaGCCAGTCTCTGGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: TLVSRKSQTGTHAHHGQERTRHS*PVSGWG
Trigger: CCCCCACCCAGAGACTGGGCAGCTGTGTCTGGTTCG...CTCCTGACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGCCCGCAGCCCCAGCCTaGCCTAGAGATGACAAATGT +
Preference number: 2 (lower is better)
Translates to: APVGVARSWDGVVRNTAPPAAPA*PRDDKC
Trigger: ACATTTGTCATCTCTAGGGCAGGCTGGGGCTGCGGG...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGACTGAGGTTTGGTCATaGCTGGGGAGCTCAGACGCC +
Preference number: 2 (lower is better)
Translates to: APVGVARSWDGVVRNTAPTEVWS*LGSSDA
Trigger: GGCGTCTGAGCTCCCCAGGCATGACCAAACCTCAGT...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGGGCAACAACACAGGTTaGGTGCGGCCAGGGCTTGTA +
Preference number: 2 (lower is better)
Translates to: APVGVARSWDGVVRNTAPGNNTG*VRPGLV
Trigger: TACAAGCCCTGGCCGCACCCAACCTGTGTTGTTGCC...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCTGCCTGTCGGTCTGTaGCACCCCCTGGAGCACCCC +
Preference number: 2 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGLPVGL*HPLEHP
Trigger: GGGGTGCTCCAGGGGGTGCCACAGACCGACAGGCAG...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp ACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGGAGCGTCCGATCCTGATGTaGGGTGGCTCTGCCCTCCAC +
Preference number: 2 (lower is better)
Translates to: TLVSRKSQTGTHAHHGQERPILM*GGSALH
Trigger: GTGGAGGGCAGAGCCACCCCACATCAGGATCGGACG...CTCCTGACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTGGCTGCCCCTGGCCTTaGCACAGGCATCGAGCCTCG +
Preference number: 2 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGGCPWP*HRHRAS
Trigger: CGAGGCTCGATGCCTGTGCCAAGGCCAGGGGCAGCC...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp ACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGGAGGCCCAGAGGAAAGACTaGGCAGGTTGGCTGTGGCGG +
Preference number: 2 (lower is better)
Translates to: TLVSRKSQTGTHAHHGQEAQRKD*AGWLWR
Trigger: CCGCCACAGCCAACCTGCCCAGTCTTTCCTCTGGGC...CTCCTGACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR TCA 90 bp ACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGGAGCCCCAGCCGTGCCTGTaGACTAAGAAGGGGTCCACA +
Preference number: 2 (lower is better)
Translates to: TLVSRKSQTGTHAHHGQEPQPCL*TKKGST
Trigger: TGTGGACCCCTTCTTAGTTCACAGGCACGGCTGGGG...CTCCTGACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACAGGTGGAAGCGGCAGTaGTGGCACGGGGAGGGGAAG +
Preference number: 2 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHRWKRQ*WHGEGK
Trigger: CTTCCCCTCCCCGTGCCAGCACTGCCGCTTCCACCT...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACAACGGAGAGAGGCCCTaGTGGAGGGGGCCTCTGGCA +
Preference number: 2 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHNGERP*WRGPLA
Trigger: TGCCAGAGGCCCCCTCCAGCAGGGCCTCTCTCCGTT...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGCCCGCAGCCCCAGCCTaGCCTAGAGATGACAAATGT +
Preference number: 2 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWPAAPA*PRDDKC
Trigger: ACATTTGTCATCTCTAGGGCAGGCTGGGGCTGCGGG...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAAGGCAACAACACAGGTTaGGTGCGGCCAGGGCTTGTA +
Preference number: 2 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMEGNNTG*VRPGLV
Trigger: TACAAGCCCTGGCCGCACCCAACCTGTGTTGTTGCC...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACGTCCCTGTCCCTCAGTaGCCAGCAGGCGCCAGCACA +
Preference number: 2 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHVPVPQ*PAGAST
Trigger: TGTGCTGGCGCCTGCTGGCCACTGAGGGACAGGGAC...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACGGGTGTCCAGGCCCTTaGGCTGCCTGTCGGTCTGTG +
Preference number: 2 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHGCPGP*AACRSV
Trigger: CACAGACCGACAGGCAGCCCAAGGGCCTGGACACCC...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGCCCTCCACTGAGGTTTaGTCATGCCTGGGGAGCTCA +
Preference number: 2 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWPSTEV*SCLGSS
Trigger: TGAGCTCCCCAGGCATGACCAAACCTCAGTGGAGGG...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGCTATGTCCATTCACCTaGCAGGCAGCCTCACGGCCA +
Preference number: 2 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWLCPFT*QAASRP
Trigger: TGGCCGTGAGGCTGCCTGCCAGGTGAATGGACATAG...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR TCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGAGGCCCCTCCACTaGGGTTTGGTCATGCCTGGG +
Preference number: 2 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGQRPLH*GLVMPG
Trigger: CCCAGGCATGACCAAACCTCAGTGGAGGGGCCTCTG...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACTGGAAGCGGCAGTGCTaGCACGGGGAGGGGAAGTTG +
Preference number: 2 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHWKRQC*HGEGKL
Trigger: CAACTTCCCCTCCCCGTGCCAGCACTGCCGCTTCCA...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTTGGGGGAAGGGGGTTTaGCACCAAGAAGGCGGCCAG +
Preference number: 2 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGWGKGV*HQEGGQ
Trigger: CTGGCCGCCTTCTTGGTGCCAAACCCCCTTCCCCCA...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGCTGCCCAGTCTCTaGGTGGGGGAAGGGGGTTTG +
Preference number: 2 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGQLPSL*VGEGGL
Trigger: CAAACCCCCTTCCCCCACCCAGAGACTGGGCAGCTG...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGTGTCATGGATGGAAATaGAACCAAGAAGGGAGGGAA +
Preference number: 2 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLCHGWK*NQEGRE
Trigger: TTCCCTCCCTTCTTGGTTCCATTTCCATCCATGACA...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCCTGGAGAACTCCCCTaGCGGGTCAAGCCCAGAGGA +
Preference number: 2 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGPGELP*RVKPRG
Trigger: TCCTCTGGGCTTGACCCGCCAGGGGAGTTCTCCAGG...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR TCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCCCCAGCCGTGCCTGTaGACTAAGAAGGGGTCCACA +
Preference number: 2 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGPQPCL*TKKGST
Trigger: TGTGGACCCCTTCTTAGTTCACAGGCACGGCTGGGG...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR TCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTACGCTACTGCAGCCTTaGCTCCCAGACAGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGTLLQP*LPDSCS
Trigger: GGAGCAGCTGTCTGGGAGTCAAGGCTGCAGTAGCGT...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACGCAGAGATGAGCAGGTaGCACGTGTCCCTGTCCCTC +
Preference number: 2 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHAEMSR*HVSLSL
Trigger: GAGGGACAGGGACACGTGCCACCTGCTCATCTCTGC...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTGCAGAGATGAGCAGGTaGCACGTGTCCCTGTCCCTC +
Preference number: 2 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGAEMSR*HVSLSL
Trigger: GAGGGACAGGGACACGTGCCACCTGCTCATCTCTGC...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGATGTACCTGTCATGGATaGAAATGGAACCAAGAAGGG +
Preference number: 2 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGCTCHG*KWNQEG
Trigger: CCCTTCTTGGTTCCATTTCCATCCATGACAGGTACA...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR TCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGCATTTGTGCTTCTaGGCGGTCGCAGGGCGTTTG +
Preference number: 2 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGQHLCF*AVAGRL
Trigger: CAAACGCCCTGCGACCGCTCAGAAGCACAAATGCTG...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGATGAAGAAACGCTACTaGAGCCTTGACTCCCAGACA +
Preference number: 2 (lower is better)
Translates to: APVGVARSWDGVVRNTAPMKKRY*SLDSQT
Trigger: TGTCTGGGAGTCAAGGCTGCAGTAGCGTTTCTTCAT...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCCCTCCACTGAGGTTTaGTCATGCCTGGGGAGCTCA +
Preference number: 2 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGPSTEV*SCLGSS
Trigger: TGAGCTCCCCAGGCATGACCAAACCTCAGTGGAGGG...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTAGCCAAAAGCACCATTaGGGAGCCTCGCTCCCACTT +
Preference number: 2 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGSQKHH*GASLPL
Trigger: AAGTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCT...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGTGTCATGGATGGAAATaGAACCAAGAAGGGAGGGAA +
Preference number: 2 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWCHGWK*NQEGRE
Trigger: TTCCCTCCCTTCTTGGTTCCATTTCCATCCATGACA...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp ACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGGAGTGTACCTGTCATGGATaGAAATGGAACCAAGAAGGG +
Preference number: 2 (lower is better)
Translates to: TLVSRKSQTGTHAHHGQECTCHG*KWNQEG
Trigger: CCCTTCTTGGTTCCATTTCCATCCATGACAGGTACA...CTCCTGACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR GCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACATGAAGAAACGCTACTaGAGCCTTGACTCCCAGACA +
Preference number: 2 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHMKKRY*SLDSQT
Trigger: TGTCTGGGAGTCAAGGCTGCAGTAGCGTTTCTTCAT...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCATATTCCCCCTTTTTaGTCCCAGACACCAGCACAA +
Preference number: 2 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGHIPPF*SQTPAQ
Trigger: TTGTGCTGGTGTCTGGGACCAAAAAGGGGGAATATG...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTTGTACCTGTCATGGATaGAAATGGAACCAAGAAGGG +
Preference number: 2 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGCTCHG*KWNQEG
Trigger: CCCTTCTTGGTTCCATTTCCATCCATGACAGGTACA...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR CCA 72 bp AGGGCAAGCGGCCTGCAGACGCGTCTGGGGCAGGCCTaGCACGGCGTGCGAGGGTCCGGTGGGTGGCCCAGG +
Preference number: 3 (lower is better)
Translates to: RASGLQTRLGQA*HGVRGSGGWPR
Trigger: CCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACGCGTCTGCAGGCCGCTTGCCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR CCA 72 bp TCTGGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTaGGTGGCCCAGGTGGAAGCGGCAGTGCTGGCACGG +
Preference number: 3 (lower is better)
Translates to: SGAGLARRARVR*VAQVEAAVLAR
Trigger: CCGTGCCAGCACTGCCGCTTCCACCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR CCA 72 bp GAGGGGACAGGAGGGCAAGCGGCCTGCAGACGCGTCTaGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTG +
Preference number: 3 (lower is better)
Translates to: EGTGGQAACRRV*GRPGTACEGPV
Trigger: CACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACGCGTCTGCAGGCCGCTTGCCCTCCTGTCCCCTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR CCA 72 bp AGGGGGTTTGGCACCAAGAAGGCGGCCAGCACTGGGTaGCGGGTGAGCGGCCCGGGCTCCACGTGGCCCCTG +
Preference number: 3 (lower is better)
Translates to: RGFGTKKAASTG*RVSGPGSTWPL
Trigger: CAGGGGCCACGTGGAGCCCGGGCCGCTCACCCGCCACCCAGTGCTGGCCGCCTTCTTGGTGCCAAACCCCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR CCA 72 bp TTGGCACAGGCATCGAGCCTCGAGGGCTGGGCTGGCTaGGCCAGGGCCGGGACCGGGAGGGGTAGCACGTCC +
Preference number: 3 (lower is better)
Translates to: LAQASSLEGWAG*ARAGTGRGSTS
Trigger: GGACGTGCTACCCCTCCCGGTCCCGGCCCTGGCCCAGCCAGCCCAGCCCTCGAGGCTCGATGCCTGTGCCAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR TCA 72 bp TTGGCACCAAGAAGGCGGCCAGCACTGGGTGGCGGGTaGGCGGCCCGGGCTCCACGTGGCCCCTGCTGTCCA +
Preference number: 3 (lower is better)
Translates to: LAPRRRPALGGG*AARAPRGPCCP
Trigger: TGGACAGCAGGGGCCACGTGGAGCCCGGGCCGCTCACCCGCCACCCAGTGCTGGCCGCCTTCTTGGTGCCAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CAA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGGTGGGGGAAGGGGGTTaGGCACCAAGAAGGCGGCCA +
Preference number: 3 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWVGEGG*APRRRP
Trigger: TGGCCGCCTTCTTGGTGCCAAACCCCCTTCCCCCAC...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR TCA 72 bp AGGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTaGCCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGC +
Preference number: 3 (lower is better)
Translates to: RAGASAGSSVQV*PELAVRAQSPC
Trigger: GCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR CCA 72 bp GTGGGTGGCTGCCGGGCGCGGTCTAGTGGCTGCCGCTaGAGTCAGGGCGAGGCTGGCTCGTGGCGAGGTATT +
Preference number: 3 (lower is better)
Translates to: VGGCRARSSGCR*SQGEAGSWRGI
Trigger: AATACCTCGCCACGAGCCAGCCTCGCCCTGACTCCAGCGGCAGCCACTAGACCGCGCCCGGCAGCCACCCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429448.1
3UTR-3UTR CAA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGCGGTCGCAGGGCGTTaGGCGGGCACCCACGCCAGG +
Preference number: 3 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGAVAGR*AGTHAR
Trigger: CCTGGCGTGGGTGCCCGCCAAACGCCCTGCGACCGC...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR TCA 72 bp GCAGGCGCCAGCACAGAGCGGCCCCAGCCGTGCCTGTaGACTAAGAAGGGGTCCACAGAAGTGCCGGGCGGG +
Preference number: 3 (lower is better)
Translates to: AGASTERPQPCL*TKKGSTEVPGG
Trigger: CCCGCCCGGCACTTCTGTGGACCCCTTCTTAGTTCACAGGCACGGCTGGGGCCGCTCTGTGCTGGCGCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR GCA 72 bp GGCTGCTCTGGGAGGAAGAGCCATGCGTCTGTAAACTaGTGGGGCTGGCGGCCCGCCCCACTGCAGGGCCCA +
Preference number: 3 (lower is better)
Translates to: GCSGRKSHASVN*WGWRPAPLQGP
Trigger: TGGGCCCTGCAGTGGGGCGGGCCGCCAGCCCCAGCAGTTTACAGACGCATGGCTCTTCCTCCCAGAGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR CCA 72 bp AGAGATGAGCAGGTGGCACGTGTCCCTGTCCCTCAGTaGCCAGCAGGCGCCAGCACAGAGCGGCCCCAGCCG +
Preference number: 3 (lower is better)
Translates to: RDEQVARVPVPQ*PAGASTERPQP
Trigger: CGGCTGGGGCCGCTCTGTGCTGGCGCCTGCTGGCCACTGAGGGACAGGGACACGTGCCACCTGCTCATCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR CCA 72 bp CATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTaGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTG +
Preference number: 3 (lower is better)
Translates to: HRLAAAFRCDPS*RYGPRAPASPL
Trigger: CAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CAA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGGGGTGTCCAGGCCCTaGGGCTGCCTGTCGGTCTGT +
Preference number: 3 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGGVSRP*GCLSVC
Trigger: ACAGACCGACAGGCAGCCCAAGGGCCTGGACACCCC...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CAA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGTGGCTGCCCCTGGCCTaGGCACAGGCATCGAGCCTC +
Preference number: 3 (lower is better)
Translates to: LASPPLTLCPFTWQAASRWLPLA*AQASSL
Trigger: GAGGCTCGATGCCTGTGCCAAGGCCAGGGGCAGCCA...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR CCA 72 bp GACAGCATTTGTGCTTCTGAGCGGTCGCAGGGCGTTTaGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCT +
Preference number: 3 (lower is better)
Translates to: DSICASERSQGV*RAPTPGCQGLS
Trigger: AGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGACCGCTCAGAAGCACAAATGCTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CAA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGCGGCAACAACACAGGTaGGGTGCGGCCAGGGCTTGT +
Preference number: 3 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLRQQHR*GAARAC
Trigger: ACAAGCCCTGGCCGCACCCAACCTGTGTTGTTGCCG...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CAA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTGTGGGGGAAGGGGGTTaGGCACCAAGAAGGCGGCCA +
Preference number: 3 (lower is better)
Translates to: GRRPRPQGPQSKARGRFIVGEGG*APRRRP
Trigger: TGGCCGCCTTCTTGGTGCCAAACCCCCTTCCCCCAC...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CAA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGCCATATTCCCCCTTTTaGGTCCCAGACACCAGCACA +
Preference number: 3 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWPYSPF*VPDTST
Trigger: TGTGCTGGTGTCTGGGACCAAAAAGGGGGAATATGG...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR CCA 72 bp CAGCCGGCTCGGGTCCAGCCCCTCAGGCCGGGCTCCTaGGATGCTGTACCTGTCATGGATGGAAATGGAACC +
Preference number: 3 (lower is better)
Translates to: QPARVQPLRPGS*DAVPVMDGNGT
Trigger: GGTTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCTGGACCCGAGCCGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR CCA 72 bp ACCGGGAGGGGTAGCACGTCCGATCCTGATGTGGGGTaGCTCTGCCCTCCACGGCGGGAAGCACAGCAAACA +
Preference number: 3 (lower is better)
Translates to: TGRGSTSDPDVG*LCPPRREAQQT
Trigger: TGTTTGCTGTGCTTCCCGCCGTGGAGGGCAGAGCCACCCCACATCAGGATCGGACGTGCTACCCCTCCCGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR CCA 72 bp CACACCACGGTCAGGAGTCCCGAGACAGCACGAGGCTaGAAGCCCTGGCCTCACCGCCTCTCACGCTATGTC +
Preference number: 3 (lower is better)
Translates to: HTTVRSPETARG*KPWPHRLSRYV
Trigger: GACATAGCGTGAGAGGCGGTGAGGCCAGGGCTTCCAGCCTCGTGCTGTCTCGGGACTCCTGACCGTGGTGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CAA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTGGGCACCCGTGGAGTTaGGGGGTGAGGTTAGTGGTT +
Preference number: 3 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSGHPWS*GVRLVV
Trigger: AACCACTAACCTCACCCCCAAACTCCACGGGTGCCC...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CAA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGGGGGTGTCCAGGCCCTaGGGCTGCCTGTCGGTCTGT +
Preference number: 3 (lower is better)
Translates to: APVGVARSWDGVVRNTAPGVSRP*GCLSVC
Trigger: ACAGACCGACAGGCAGCCCAAGGGCCTGGACACCCC...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR GCA 72 bp CAACAACACAGGTTGGGTGCGGCCAGGGCTTGTAGGTaGGGCGACCATCTGCAGAGGGAGCGTGCCGGGATA +
Preference number: 3 (lower is better)
Translates to: QQHRLGAARACR*GDHLQRERAGI
Trigger: TATCCCGGCACGCTCCCTCTGCAGATGGTCGCCGCACCTACAAGCCCTGGCCGCACCCAACCTGTGTTGTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CAA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGCTGGGCTCCTCCCTCTaGTCCCCAGGGCCACCCTGT +
Preference number: 3 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWLGSSL*SPGPPC
Trigger: ACAGGGTGGCCCTGGGGACAAGAGGGAGGAGCCCAG...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CAA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGAACGCTACTGCAGCCTaGACTCCCAGACAGCTGCTC +
Preference number: 3 (lower is better)
Translates to: LASPPLTLCPFTWQAASRNATAA*TPRQLL
Trigger: GAGCAGCTGTCTGGGAGTCAAGGCTGCAGTAGCGTT...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CAA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAAAGCCAAAAGCACCATaGGGGAGCCTCGCTCCCACT +
Preference number: 3 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGKPKAP*GSLAPT
Trigger: AGTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTT...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR GCA 72 bp AGGGGTAGCACGTCCGATCCTGATGTGGGGTGGCTCTaGCCTCCACGGCGGGAAGCACAGCAAACATCGTAC +
Preference number: 3 (lower is better)
Translates to: RGSTSDPDVGWL*PPRREAQQTSY
Trigger: GTACGATGTTTGCTGTGCTTCCCGCCGTGGAGGGCAGAGCCACCCCACATCAGGATCGGACGTGCTACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR CCA 72 bp CCAAAAGCACCATTGGGGAGCCTCGCTCCCACTTCATaGGGAGGAGACCGAGGCCACAGGGACCTCAGTCCA +
Preference number: 3 (lower is better)
Translates to: PKAPLGSLAPTS*GGDRGHRDLSP
Trigger: TGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCCCAATGGTGCTTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR CCA 72 bp GTCAGGAGTCCCGAGACAGCACGAGGCTGGAAGCCCTaGCCTCACCGCCTCTCACGCTATGTCCATTCACCT +
Preference number: 3 (lower is better)
Translates to: VRSPETARGWKP*PHRLSRYVHSP
Trigger: AGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAGGGCTTCCAGCCTCGTGCTGTCTCGGGACTCCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR TCA 72 bp TGCCTGTCGGTCTGTGGCACCCCCTGGAGCACCCCATaGAGAAACGCTACTGCAGCCTTGACTCCCAGACAG +
Preference number: 3 (lower is better)
Translates to: CLSVCGTPWSTP*RNATAALTPRQ
Trigger: CTGTCTGGGAGTCAAGGCTGCAGTAGCGTTTCTTCATGGGGTGCTCCAGGGGGTGCCACAGACCGACAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR CCA 72 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTaGCAGGCAGCCTCACGGCCATGGACAGCATTTGTG +
Preference number: 3 (lower is better)
Translates to: LASPPLTLCPFT*QAASRPWTAFV
Trigger: CACAAATGCTGTCCATGGCCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR CCA 72 bp TGGAGTCAGGGCGAGGCTGGCTCGTGGCGAGGTATTTaGCTCTCATGCTGGAGGTGTACTGTCGCTCTGAGG +
Preference number: 3 (lower is better)
Translates to: WSQGEAGSWRGI*LSCWRCTVALR
Trigger: CCTCAGAGCGACAGTACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCCCTGACTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429448.1
3UTR-3UTR CAA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACGGGGTGTCCAGGCCCTaGGGCTGCCTGTCGGTCTGT +
Preference number: 3 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHGVSRP*GCLSVC
Trigger: ACAGACCGACAGGCAGCCCAAGGGCCTGGACACCCC...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CAA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTTGGCTGCCCCTGGCCTaGGCACAGGCATCGAGCCTC +
Preference number: 3 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGWLPLA*AQASSL
Trigger: GAGGCTCGATGCCTGTGCCAAGGCCAGGGGCAGCCA...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR GCA 72 bp GGGATGAGGACATTTCCGGTCCAGGTAGCTGCCGGCTaGTCTGGGAGGAAGAGCCATGCGTCTGTAAACTGC +
Preference number: 3 (lower is better)
Translates to: GMRTFPVQVAAG*SGRKSHASVNC
Trigger: GCAGTTTACAGACGCATGGCTCTTCCTCCCAGAGCAGCCGGCAGCTACCTGGACCGGAAATGTCCTCATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR CCA 72 bp CACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATaGGATGGAGTAGTTAGGAACACGGCACCGAAAACT +
Preference number: 3 (lower is better)
Translates to: HQPDAPVGVARS*DGVVRNTAPKT
Trigger: AGTTTTCGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CAA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTAAGCCAAAAGCACCATaGGGGAGCCTCGCTCCCACT +
Preference number: 3 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGKPKAP*GSLAPT
Trigger: AGTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTT...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CAA 90 bp ACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGGAGCCATATTCCCCCTTTTaGGTCCCAGACACCAGCACA +
Preference number: 3 (lower is better)
Translates to: TLVSRKSQTGTHAHHGQEPYSPF*VPDTST
Trigger: TGTGCTGGTGTCTGGGACCAAAAAGGGGGAATATGG...CTCCTGACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
3UTR-3UTR CAA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGTTCCTTTCTTCAACCTaGGTGAGTAGAAAGTCACAG +
Preference number: 3 (lower is better)
Translates to: APVGVARSWDGVVRNTAPFLSST*VSRKSQ
Trigger: CTGTGACTTTCTACTCACCAAGGTTGAAGAAAGGAA...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CGTCTGGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTGGGTGGCCCAGGTGGGCCTGCAGACGCGTCTaGGGCAGGCCTGGCACGGCG +
Preference number: 4 (lower is better)
Translates to: RLGQAWHGVRGSGGWPRWACRRV*GRPGTA
Trigger: CGCCGTGCCAGGCCTGCCCCAGACGCGTCTGCAGGC...CCACCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CGTCTGGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTGGGTGGCCCAGGTGGCGGGCCCAGAGCCCCTaGGTCTCCACTGTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: RLGQAWHGVRGSGGWPRWRAQSP*VSTVPL
Trigger: CAGGGGCACAGTGGAGACGCAGGGGCTCTGGGCCCG...CCACCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CGTCTGGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTGGGTGGCCCAGGTGGGGTGGCGTGCAGGGCTaGGGCATCGGCTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RLGQAWHGVRGSGGWPRWGGVQG*GIGWQQ
Trigger: CTGCTGCCAGCCGATGCCCCAGCCCTGCACGCCACC...CCACCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CGTCTGGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTGGGTGGCCCAGGTGGGGAGAGAGGCCCTGCTaGAGGGGGCCTCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RLGQAWHGVRGSGGWPRWGERPC*RGPLAA
Trigger: GGCTGCCAGAGGCCCCCTCCAGCAGGGCCTCTCTCC...CCACCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CGTCTGGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTGGGTGGCCCAGGTGGTCAGACGCCCCGGCTTaGGGCCCCAGGCCCATGGAC +
Preference number: 4 (lower is better)
Translates to: RLGQAWHGVRGSGGWPRWSDAPA*GPRPMD
Trigger: GTCCATGGGCCTGGGGCCCCAAGCCGGGGCGTCTGA...CCACCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGAGCCGGCAGGAGGGGTaGGCCTGTGGGTGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: ASAPARTWAHTAGSGPARSRQEG*ACGWAG
Trigger: GCCCGCCCACCCACAGGCTCACCCCTCCTGCCGGCT...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp CGTCTGGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTGGGTGGCCCAGGTGGTGCAGGGCCCAGCCTTaGCCCCTGCACGTGGCCATC +
Preference number: 4 (lower is better)
Translates to: RLGQAWHGVRGSGGWPRWCRAQP*PLHVAI
Trigger: GATGGCCACGTGCAGGGGTCAAGGCTGGGCCCTGCA...CCACCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGCGTGGGGTGGGTGGCTaGCGGGCGCGGTCTAGTGGC +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWRGVGG*RARSSG
Trigger: GCCACTAGACCGCGCCCGGCAGCCACCCACCCCACG...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CGTCTGGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTGGGTGGCCCAGGTGGGGTGCGGCGACCATCTaGAGAGGGAGCGTGCCGGGA +
Preference number: 4 (lower is better)
Translates to: RLGQAWHGVRGSGGWPRWGAATI*RGSVPG
Trigger: TCCCGGCACGCTCCCTCTGCAGATGGTCGCCGCACC...CCACCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CGTCTGGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTGGGTGGCCCAGGTGGGGCTGCCCCTGGCCTTaGCACAGGCATCGAGCCTCG +
Preference number: 4 (lower is better)
Translates to: RLGQAWHGVRGSGGWPRWGCPWP*HRHRAS
Trigger: CGAGGCTCGATGCCTGTGCCAAGGCCAGGGGCAGCC...CCACCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CGTCTGGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTGGGTGGCCCAGGTGGGCGTCTGTAAACTGCTaGGGCTGGCGGCCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: RLGQAWHGVRGSGGWPRWASVNC*GWRPAP
Trigger: TGGGGCGGGCCGCCAGCCCCAGCAGTTTACAGACGC...CCACCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGGGTGCTCCTCGCTCTTaGGCCGCCGGCAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWGAPRS*AAGSTA
Trigger: GGCTGTGCTGCCGGCGGCGCAAGAGCGAGGAGCACC...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR GCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGGGGCCGCGGCCGGGATaGTGGTCTCACTGCCGTAGC +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWGPRPG*WSHCRS
Trigger: GCTACGGCAGTGAGACCAGCATCCCGGCCGCGGCCC...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp AGTTGGCACGTGGGGTGGGTGGCTGCCGGGCGCGGTCTAGTGGCTGCCGCTGGACGTGGGGTGGGTGGCTaGCGGGCGCGGTCTAGTGGC +
Preference number: 4 (lower is better)
Translates to: SWHVGWVAAGRGLVAAAGRGVGG*RARSSG
Trigger: GCCACTAGACCGCGCCCGGCAGCCACCCACCCCACG...TCCAGCGGCAGCCACTAGACCGCGCCCGGCAGCCACCCACCCCACGTGCCAACT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR GCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGCGGGCCCAGAGCCCCTaGGTCTCCACTGTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWRAQSP*VSTVPL
Trigger: CAGGGGCACAGTGGAGACGCAGGGGCTCTGGGCCCG...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGGCACCCACGCCAGGGTaGCAGGGCCTCTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWAPTPG*QGLSPG
Trigger: GCCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGC...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGCTGGGCTCCGCCGTGTaGTTCAGCCCCACCGCCGTG +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWLGSAV*FSPTAV
Trigger: CACGGCGGTGGGGCTGAACCACACGGCGGAGCCCAG...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR CCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGGCGTTGCTGACGGTGTaGGCCGCGGCCGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWALLTV*AAAGML
Trigger: CAGCATCCCGGCCGCGGCCCACACCGTCAGCAACGC...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGGAAGGCGGCCAGCACTaGGTGGCGGGTGAGCGGCCC +
Preference number: 4 (lower is better)
Translates to: ASAPARTWAHTAGSGPAREGGQH*VAGERP
Trigger: GGGCCGCTCACCCGCCACCCAGTGCTGGCCGCCTTC...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CGTCTGGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTGGGTGGCCCAGGTGGGGTGAGAGTGGGGGCTaGCCATGGCAGCAGGCACCA +
Preference number: 4 (lower is better)
Translates to: RLGQAWHGVRGSGGWPRWGESGG*PWQQAP
Trigger: TGGTGCCTGCTGCCATGGCCAGCCCCCACTCTCACC...CCACCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp CGTCTGGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTGGGTGGCCCAGGTGGAGTCCACCAGGGCGGTaGGGTGCTGCAGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: RLGQAWHGVRGSGGWPRWSPPGR*GAAGSP
Trigger: AGGTGAACCTGCAGCACCTCACCGCCCTGGTGGACT...CCACCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp GGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACGCACTGGGTGGCGGGTaGGCGGCCCGGGCTCCACGT +
Preference number: 4 (lower is better)
Translates to: GLGHRLAAAFRCDPSWRYALGGG*AARAPR
Trigger: ACGTGGAGCCCGGGCCGCTCACCCGCCACCCAGTGC...GTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGCAGTCGGCGTCCAGGTaGTCCTCGCTCTTGCGCCGC +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWQSASR*SSLLRR
Trigger: GCGGCGCAAGAGCGAGGAGCACCTGGACGCCGACTG...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR GCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGGGTGCGGCGACCATCTaGAGAGGGAGCGTGCCGGGA +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWGAATI*RGSVPG
Trigger: TCCCGGCACGCTCCCTCTGCAGATGGTCGCCGCACC...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGGCTCCACGTGGCCCCTaGTGTCCACGGAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ASAPARTWAHTAGSGPARAPRGP*CPRRAG
Trigger: CCCAGCCCTCCGTGGACAGCAGGGGCCACGTGGAGC...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGACGTGGCCATCCAGCTaGCCTCTGGCTGCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWTWPSS*PLAAPG
Trigger: GCCAGGGGCAGCCAGAGGGCAGCTGGATGGCCACGT...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGCTGGGCTCCGCCGTGTaGTTCAGCCCCACCGCCGTG +
Preference number: 4 (lower is better)
Translates to: ASAPARTWAHTAGSGPARLGSAV*FSPTAV
Trigger: CACGGCGGTGGGGCTGAACCACACGGCGGAGCCCAG...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR CCA 90 bp AGTTGGCACGTGGGGTGGGTGGCTGCCGGGCGCGGTCTAGTGGCTGCCGCTGGAAGTTGGCACGTGGGGTaGGTGGCTGCCGGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: SWHVGWVAAGRGLVAAAGSWHVG*VAAGRG
Trigger: ACCGCGCCCGGCAGCCACCCACCCCACGTGCCAACT...TCCAGCGGCAGCCACTAGACCGCGCCCGGCAGCCACCCACCCCACGTGCCAACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR CCA 90 bp CGTCTGGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTGGGTGGCCCAGGTGGTGGAAGCGGCAGTGCTaGCACGGGGAGGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: RLGQAWHGVRGSGGWPRWWKRQC*HGEGKL
Trigger: CAACTTCCCCTCCCCGTGCCAGCACTGCCGCTTCCA...CCACCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGGGTGGGTGGCCCAGGTaGAAGCGGCAGTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWGGWPR*KRQCWH
Trigger: GTGCCAGCACTGCCGCTTCCACCTGGGCCACCCACC...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp AGTTGGCACGTGGGGTGGGTGGCTGCCGGGCGCGGTCTAGTGGCTGCCGCTGGACGTGCGAGGGTCCGGTaGGTGGCCCAGGTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: SWHVGWVAAGRGLVAAAGRARVR*VAQVEA
Trigger: CGCTTCCACCTGGGCCACCCACCGGACCCTCGCACG...TCCAGCGGCAGCCACTAGACCGCGCCCGGCAGCCACCCACCCCACGTGCCAACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR CCA 90 bp CGTCTGGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTGGGTGGCCCAGGTGGGGCACTGCAGAGAGATaGGCACGTGGAGGGACCACG +
Preference number: 4 (lower is better)
Translates to: RLGQAWHGVRGSGGWPRWGTAER*ARGGTT
Trigger: CGTGGTCCCTCCACGTGCCCATCTCTCTGCAGTGCC...CCACCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CGTCTGGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTGGGTGGCCCAGGTGGAGGTTTGGTCATGCCTaGGGAGCTCAGACGCCCCGG +
Preference number: 4 (lower is better)
Translates to: RLGQAWHGVRGSGGWPRWRFGHA*GAQTPR
Trigger: CCGGGGCGTCTGAGCTCCCCAGGCATGACCAAACCT...CCACCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CGTCTGGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTGGGTGGCCCAGGTGGCCTGGAGAACTCCCCTaGCGGGTCAAGCCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: RLGQAWHGVRGSGGWPRWPGELP*RVKPRG
Trigger: TCCTCTGGGCTTGACCCGCCAGGGGAGTTCTCCAGG...CCACCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTAGCCGGCAGGAGGGGTaGGCCTGTGGGTGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSSRQEG*ACGWAG
Trigger: GCCCGCCCACCCACAGGCTCACCCCTCCTGCCGGCT...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGAGCCGGCAGGAGGGGTaGGCCTGTGGGTGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLSRQEG*ACGWAG
Trigger: GCCCGCCCACCCACAGGCTCACCCCTCCTGCCGGCT...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGGCCCCAGGGAGGGGATaGGGACATTTCCGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWAPGRG*GHFRSR
Trigger: CCTGGACCGGAAATGTCCTCATCCCCTCCCTGGGGC...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGCTGCCCGACAGCTTCTaGTGGAAGGGGTTGGCGGCG +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWLPDSF*WKGLAA
Trigger: CGCCGCCAACCCCTTCCAGCAGAAGCTGTCGGGCAG...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGAGTCCAGATGCAGGCTaGGGCAGTCCACCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWSPDAG*GSPPGR
Trigger: CCGCCCTGGTGGACTGCCGCAGCCTGCATCTGGACT...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CGTCTGGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTGGGTGGCCCAGGTGGTCAGGGCCTCTCTTTTaGTGCCAGGTGTGCGGGACG +
Preference number: 4 (lower is better)
Translates to: RLGQAWHGVRGSGGWPRWSGPLF*CQVCGT
Trigger: CGTCCCGCACACCTGGCAGCAAAAGAGAGGCCCTGA...CCACCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGAGGTGGAAGCGGCAGTaGTGGCACGGGGAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWRWKRQ*WHGEGK
Trigger: CTTCCCCTCCCCGTGCCAGCACTGCCGCTTCCACCT...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGGGTGCGGCGACCATCTaGAGAGGGAGCGTGCCGGGA +
Preference number: 4 (lower is better)
Translates to: ASAPARTWAHTAGSGPARGAATI*RGSVPG
Trigger: TCCCGGCACGCTCCCTCTGCAGATGGTCGCCGCACC...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGAACGGAGAGAGGCCCTaGTGGAGGGGGCCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWNGERP*WRGPLA
Trigger: TGCCAGAGGCCCCCTCCAGCAGGGCCTCTCTCCGTT...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CGTCTGGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTGGGTGGCCCAGGTGGGCCGGGCTCCTGGGATaGTGTACCTGTCATGGATGG +
Preference number: 4 (lower is better)
Translates to: RLGQAWHGVRGSGGWPRWAGLLG*CTCHGW
Trigger: CCATCCATGACAGGTACAGCATCCCAGGAGCCCGGC...CCACCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGCATGCGTCTGTAAACTaGTGGGGCTGGCGGCCCGCC +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWHASVN*WGWRPA
Trigger: GGCGGGCCGCCAGCCCCAGCAGTTTACAGACGCATG...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CGTCTGGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTGGGTGGCCCAGGTGGCAGGTAGCTGCCGGCTaGTCTGGGAGGAAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: RLGQAWHGVRGSGGWPRWQVAAG*SGRKSH
Trigger: ATGGCTCTTCCTCCCAGAGCAGCCGGCAGCTACCTG...CCACCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CGTCTGGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTGGGTGGCCCAGGTGGGGGGTAGTGGATGCCTaGTGGGGAGCACTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: RLGQAWHGVRGSGGWPRWGVVDA*WGALSV
Trigger: CACTGAGAGTGCTCCCCAGCAGGCATCCACTACCCC...CCACCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG
71% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CGTCTGGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTGGGTGGCCCAGGTGGTCCTCCAAAAGGGGATaGCGGCCGTGTAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: RLGQAWHGVRGSGGWPRWSSKRG*RPCSPA
Trigger: TGCTGGGCTACACGGCCGCCATCCCCTTTTGGAGGA...CCACCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR CCA 90 bp AGTTGGCACGTGGGGTGGGTGGCTGCCGGGCGCGGTCTAGTGGCTGCCGCTGGACCGCGGCCGGGATGCTaGTCTCACTGCCGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: SWHVGWVAAGRGLVAAAGPRPGC*SHCRSC
Trigger: GCAGCTACGGCAGTGAGACCAGCATCCCGGCCGCGG...TCCAGCGGCAGCCACTAGACCGCGCCCGGCAGCCACCCACCCCACGTGCCAACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR CCA 90 bp CGTCTGGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTGGGTGGCCCAGGTGGGGCGAGGCTGGCTCGTaGCGAGGTATTTGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: RLGQAWHGVRGSGGWPRWGEAGS*RGIWLS
Trigger: TGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCC...CCACCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp TGGCACGTGGGGTGGGTGGCTGCCGGGCGCGGTCTAGTGGCTGCCGCTGGAGTCTCTAGTGGCTGCCGCTaGAGTCAGGGCGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: WHVGWVAAGRGLVAAAGVSSGCR*SQGEAG
Trigger: GCCAGCCTCGCCCTGACTCCAGCGGCAGCCACTAGA...GACTCCAGCGGCAGCCACTAGACCGCGCCCGGCAGCCACCCACCCCACGTGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR CCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGAGGTGTGACCCGAGTTaGCGGTACGGGCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWRCDPS*RYGPRA
Trigger: GGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCT...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGGATCCTGATGTGGGGTaGCTCTGCCCTCCACGGCGG +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWDPDVG*LCPPRR
Trigger: CCGCCGTGGAGGGCAGAGCCACCCCACATCAGGATC...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGAGAGGGCCAGGTAGATaGGGCCCTCCACGCCGTCAT +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWRGPGR*GPPRRH
Trigger: ATGACGGCGTGGAGGGCCTCATCTACCTGGCCCTCT...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGCAGAGGCCCCTCCACTaGGGTTTGGTCATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWQRPLH*GLVMPG
Trigger: CCCAGGCATGACCAAACCTCAGTGGAGGGGCCTCTG...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp TGGGTGGCTGCCGGGCGCGGTCTAGTGGCTGCCGCTGGAGTCAGGGCGAGGCTGAGGGCGGTGAGGTGCTaGAGGTTCACCTCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: WVAAGRGLVAAAGVRARLRAVRC*RFTSVP
Trigger: TGGCACGGAGGTGAACCTGCAGCACCTCACCGCCCT...CAGCCTCGCCCTGACTCCAGCGGCAGCCACTAGACCGCGCCCGGCAGCCACCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR GCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGACCAGGGCGGTGAGGTaGTGCAGGTTCACCTCCGTG +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWTRAVR*CRFTSV
Trigger: CACGGAGGTGAACCTGCAGCACCTCACCGCCCTGGT...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp TTGGCACGTGGGGTGGGTGGCTGCCGGGCGCGGTCTAGTGGCTGCCGCTGGAGTAGTCCAGATGCAGGCTaGGGCAGTCCACCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: LARGVGGCRARSSGCRWSSPDAG*GSPPGR
Trigger: CCGCCCTGGTGGACTGCCGCAGCCTGCATCTGGACT...ACTCCAGCGGCAGCCACTAGACCGCGCCCGGCAGCCACCCACCCCACGTGCCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR GCA 90 bp CGTCTGGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTGGGTGGCCCAGGTGGTTTTGCTGCCAGGTGTaGGGGACGCTGCAGACGATG +
Preference number: 4 (lower is better)
Translates to: RLGQAWHGVRGSGGWPRWFCCQV*GTLQTM
Trigger: CATCGTCTGCAGCGTCCCGCACACCTGGCAGCAAAA...CCACCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp TGGGTGGCTGCCGGGCGCGGTCTAGTGGCTGCCGCTGGAGTCAGGGCGAGGCTGGGGCCTCTCTTTTGCTaGCAGGTGTGCGGGACGCTG +
Preference number: 4 (lower is better)
Translates to: WVAAGRGLVAAAGVRARLGPLFC*QVCGTL
Trigger: CAGCGTCCCGCACACCTGGCAGCAAAAGAGAGGCCC...CAGCCTCGCCCTGACTCCAGCGGCAGCCACTAGACCGCGCCCGGCAGCCACCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR GCA 90 bp GGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACGGGCCGCGGCCGGGATaGTGGTCTCACTGCCGTAGC +
Preference number: 4 (lower is better)
Translates to: GLGHRLAAAFRCDPSWRYGPRPG*WSHCRS
Trigger: GCTACGGCAGTGAGACCAGCATCCCGGCCGCGGCCC...GTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTCGTGGGGTGGGTGGCTaGCGGGCGCGGTCTAGTGGC +
Preference number: 4 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSRGVGG*RARSSG
Trigger: GCCACTAGACCGCGCCCGGCAGCCACCCACCCCACG...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGAACGGAGAGAGGCCCTaGTGGAGGGGGCCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: ASAPARTWAHTAGSGPARNGERP*WRGPLA
Trigger: TGCCAGAGGCCCCCTCCAGCAGGGCCTCTCTCCGTT...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGCGAACCAGACACAGCTaGCCAGTCTCTGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWRTRHS*PVSGWG
Trigger: CCCCCACCCAGAGACTGGGCAGCTGTGTCTGGTTCG...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGCAGGCACCAGCCAGATaGCCCAGTAGGTGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWQAPAR*PSRCGE
Trigger: CTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTG...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGGGTAGCCCAGCCACCTaGAGGCAAACCTGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWGSPAT*RQTWEC
Trigger: GCACTCCCAGGTTTGCCTGCAGGTGGCTGGGCTACC...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403167.5
CDS-3UTR CCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGTCCTCGGGCCGGAACTaGCTGCTAGTGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: ASAPARTWAHTAGSGPARSSGRN*LLVASQ
Trigger: CTGGGAGGCCACTAGCAGCCAGTTCCGGCCCGAGGA...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR CCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGCCATTCAGCACCTCCTaGACGCGGAGGAGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: ASAPARTWAHTAGSGPARPFSTS*TRRRGS
Trigger: GGACCCCCTCCTCCGCGTCCAGGAGGTGCTGAATGG...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGTCTAGTGGCTGCCGCTaGAGTCAGGGCGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ASAPARTWAHTAGSGPARSSGCR*SQGEAG
Trigger: GCCAGCCTCGCCCTGACTCCAGCGGCAGCCACTAGA...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACAGTTGGCACGTGGGGTaGGTGGCTGCCGGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: GLGHRLAAAFRCDPSWRYSWHVG*VAAGRG
Trigger: ACCGCGCCCGGCAGCCACCCACCCCACGTGCCAACT...GTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACGGAGAGAGGCCCTGCTaGAGGGGGCCTCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GLGHRLAAAFRCDPSWRYGERPC*RGPLAA
Trigger: GGCTGCCAGAGGCCCCCTCCAGCAGGGCCTCTCTCC...GTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTGGCCCGGGCTCCACGTaGCCCCTGCTGTCCACGGAG +
Preference number: 4 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSGPGST*PLLSTE
Trigger: CTCCGTGGACAGCAGGGGCCACGTGGAGCCCGGGCC...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGGGGGCAGCACCTGCCTaGGGAGGGGTGTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLGAAPA*GGVSRP
Trigger: GGGCCTGGACACCCCTCCCCAGGCAGGTGCTGCCCC...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGGAGACAGCACGAGGCTaGAAGCCCTGGCCTCACCGC +
Preference number: 4 (lower is better)
Translates to: ASAPARTWAHTAGSGPARETARG*KPWPHR
Trigger: GCGGTGAGGCCAGGGCTTCCAGCCTCGTGCTGTCTC...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGCTCCCAACGAGGCTGTaGGCCTGGGGGCTGCAAGAC +
Preference number: 4 (lower is better)
Translates to: ASAPARTWAHTAGSGPARLPTRL*AWGLQD
Trigger: GTCTTGCAGCCCCCAGGCCCACAGCCTCGTTGGGAG...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGTGGGTGGGTGGGCAATaGGCCAGGGGCTGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: ASAPARTWAHTAGSGPARWVGGQ*ARGCSQ
Trigger: TTGGGAGCAGCCCCTGGCCCATTGCCCACCCACCCA...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACCCACAGGAGAGGCCCTaGTCCCCCGCCTGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: GLGHRLAAAFRCDPSWRYPQERP*SPACPL
Trigger: AAGGGGGCAGGCGGGGGACCAGGGCCTCTCCTGTGG...GTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CGTCTGGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTGGGTGGCCCAGGTGGGGCATTCAGAGCGTCTaGGTCATGGGGACTGGTGTC +
Preference number: 4 (lower is better)
Translates to: RLGQAWHGVRGSGGWPRWGIQSV*VMGTGV
Trigger: GACACCAGTCCCCATGACCCAGACGCTCTGAATGCC...CCACCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403167.5
CDS-3UTR TCA 90 bp AGTTGGCACGTGGGGTGGGTGGCTGCCGGGCGCGGTCTAGTGGCTGCCGCTGGAGGGACTCGCGCCCAATaGGTGGGGTGTTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: SWHVGWVAAGRGLVAAAGGTRAQ*VGCSHS
Trigger: GCTGTGAGAACACCCCACTCATTGGGCGCGAGTCCC...TCCAGCGGCAGCCACTAGACCGCGCCCGGCAGCCACCCACCCCACGTGCCAACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR TCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGACCTCAGGGCAGAGATaGGCAGGTGGCACGTGTCCC +
Preference number: 4 (lower is better)
Translates to: ASAPARTWAHTAGSGPARTSGQR*AGGTCP
Trigger: GGGACACGTGCCACCTGCTCATCTCTGCCCTGAGGT...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGCAGCCAGGCGGGGCCTaGAGCAGAGGCCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLQPGGA*SRGPST
Trigger: AGTGGAGGGGCCTCTGCTTCAGGCCCCGCCTGGCTG...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGGCCGTAGAATCCCACTaGGATGCCGGCGCTGCACAC +
Preference number: 4 (lower is better)
Translates to: ASAPARTWAHTAGSGPARAVESH*DAGAAH
Trigger: GTGTGCAGCGCCGGCATCGCAGTGGGATTCTACGGC...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR GCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGTGCCGCTCCAGGGTCTaGAGGCTGGGCTCCGCCGTG +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLCRSRV*RLGSAV
Trigger: CACGGCGGAGCCCAGCCTGCAGACCCTGGAGCGGCA...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR GCA 90 bp AGTTGGCACGTGGGGTGGGTGGCTGCCGGGCGCGGTCTAGTGGCTGCCGCTGGAACCAGGGCGGTGAGGTaGTGCAGGTTCACCTCCGTG +
Preference number: 4 (lower is better)
Translates to: SWHVGWVAAGRGLVAAAGTRAVR*CRFTSV
Trigger: CACGGAGGTGAACCTGCAGCACCTCACCGCCCTGGT...TCCAGCGGCAGCCACTAGACCGCGCCCGGCAGCCACCCACCCCACGTGCCAACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR GCA 90 bp GGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACGCGCGGTCTAGTGGCTaGCGCTGGAGTCAGGGCGAG +
Preference number: 4 (lower is better)
Translates to: GLGHRLAAAFRCDPSWRYARSSG*RWSQGE
Trigger: CTCGCCCTGACTCCAGCGGCAGCCACTAGACCGCGC...GTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTCGTGGGGTGGGTGGCTaGCGGGCGCGGTCTAGTGGC +
Preference number: 4 (lower is better)
Translates to: GRRPRPQGPQSKARGRFIRGVGG*RARSSG
Trigger: GCCACTAGACCGCGCCCGGCAGCCACCCACCCCACG...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGGGAGGGCAAGCGGCCTaGAGACGCGTCTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLGGQAA*RRVWGR
Trigger: CCTGCCCCAGACGCGTCTGCAGGCCGCTTGCCCTCC...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTGCTCCACGTGGCCCCTaGTGTCCACGGAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSAPRGP*CPRRAG
Trigger: CCCAGCCCTCCGTGGACAGCAGGGGCCACGTGGAGC...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTGCACCCACGCCAGGGTaGCAGGGCCTCTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSAPTPG*QGLSPG
Trigger: GCCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGC...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGCGGCCACCGTGCGGTTaGCGTGGCGGAGCGAGTAGG +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLRPPCG*RGGASR
Trigger: CCTACTCGCTCCGCCACGCCAACCGCACGGTGGCCG...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR CCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGATCCCACACGCGGTCCTaGACCCCGGCCACCGTGCGG +
Preference number: 4 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGSHTRS*TPATVR
Trigger: CCGCACGGTGGCCGGGGTCCAGGACCGCGTGTGGGA...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR CCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGCCACACAGAAGTCGCTaGAGCCCACGGACACAGCCA +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWPHRSR*SPRTQP
Trigger: TGGCTGTGTCCGTGGGCTCCAGCGACTTCTGTGTGG...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp TCAGGTGTGACCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTGTTCTGCTGGAAGGGGTTaGCGGCGCGGGGCGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SGVTRVGGTGPEPLRLHCSAGRG*RRGASR
Trigger: CCTGCTCGCCCCGCGCCGCCAACCCCTTCCAGCAGA...ACAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTGCGTTGCTGACGGTGTaGGCCGCGGCCGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSALLTV*AAAGML
Trigger: CAGCATCCCGGCCGCGGCCCACACCGTCAGCAACGC...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp TTGGCACGTGGGGTGGGTGGCTGCCGGGCGCGGTCTAGTGGCTGCCGCTGGAGTCTCGCGCCCAATGAGTaGGGTGTTCTCACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: LARGVGGCRARSSGCRWSLAPNE*GVLTAG
Trigger: CCCCGCTGTGAGAACACCCCACTCATTGGGCGCGAG...ACTCCAGCGGCAGCCACTAGACCGCGCCCGGCAGCCACCCACCCCACGTGCCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR CCA 90 bp TCAGGTGTGACCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTGTAGTTGGCACGTGGGGTaGGTGGCTGCCGGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: SGVTRVGGTGPEPLRLHCSWHVG*VAAGRG
Trigger: ACCGCGCCCGGCAGCCACCCACCCCACGTGCCAACT...ACAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp TCAGGTGTGACCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTGTCGTGCGAGGGTCCGGTaGGTGGCCCAGGTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: SGVTRVGGTGPEPLRLHCRARVR*VAQVEA
Trigger: CGCTTCCACCTGGGCCACCCACCGGACCCTCGCACG...ACAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGCGTCTGGGGCAGGCCTaGCACGGCGTGCGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: LASPPLTLCPFTWQAASRRLGQA*HGVRGS
Trigger: GGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGCCTGCAGACGCGTCTaGGGCAGGCCTGGCACGGCG +
Preference number: 4 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGACRRV*GRPGTA
Trigger: CGCCGTGCCAGGCCTGCCCCAGACGCGTCTGCAGGC...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGGGAGAGAGGCCCTGCTaGAGGGGGCCTCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLGERPC*RGPLAA
Trigger: GGCTGCCAGAGGCCCCCTCCAGCAGGGCCTCTCTCC...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTGGCCCGGGCTCCACGTaGCCCCTGCTGTCCACGGAG +
Preference number: 4 (lower is better)
Translates to: GRRPRPQGPQSKARGRFIGPGST*PLLSTE
Trigger: CTCCGTGGACAGCAGGGGCCACGTGGAGCCCGGGCC...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGAAGGCGGCCAGCACTaGGTGGCGGGTGAGCGGCCC +
Preference number: 4 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGEGGQH*VAGERP
Trigger: GGGCCGCTCACCCGCCACCCAGTGCTGGCCGCCTTC...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CGTCTGGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTGGGTGGCCCAGGTGGAGCCAAAAGCACCATTaGGGAGCCTCGCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: RLGQAWHGVRGSGGWPRWSQKHH*GASLPL
Trigger: AAGTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCT...CCACCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACGTAAACTGCTGGGGCTaGCGGCCCGCCCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: GLGHRLAAAFRCDPSWRYVNCWG*RPAPLQ
Trigger: CTGCAGTGGGGCGGGCCGCCAGCCCCAGCAGTTTAC...GTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACGCGTCTGTAAACTGCTaGGGCTGGCGGCCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: GLGHRLAAAFRCDPSWRYASVNC*GWRPAP
Trigger: TGGGGCGGGCCGCCAGCCCCAGCAGTTTACAGACGC...GTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGACGGTCGCAGGGCGTTTaGCGGGCACCCACGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGRSQGV*RAPTPG
Trigger: CCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGACCG...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp TCAGGTGTGACCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTGTCCACAGGAGAGGCCCTaGTCCCCCGCCTGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: SGVTRVGGTGPEPLRLHCPQERP*SPACPL
Trigger: AAGGGGGCAGGCGGGGGACCAGGGCCTCTCCTGTGG...ACAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGCCCCAGCCGTGCCTGTaGACTAAGAAGGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: ASAPARTWAHTAGSGPARPQPCL*TKKGST
Trigger: TGTGGACCCCTTCTTAGTTCACAGGCACGGCTGGGG...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGCAGCCAGGCGGGGCCTaGAGCAGAGGCCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: LASPPLTLCPFTWQAASRQPGGA*SRGPST
Trigger: AGTGGAGGGGCCTCTGCTTCAGGCCCCGCCTGGCTG...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp TGGGTGGCTGCCGGGCGCGGTCTAGTGGCTGCCGCTGGAGTCAGGGCGAGGCTGGGTGTACTGTCGCTCTaGGGGAACAGCTACCACAGC +
Preference number: 4 (lower is better)
Translates to: WVAAGRGLVAAAGVRARLGVLSL*GNSYHS
Trigger: GCTGTGGTAGCTGTTCCCTCAGAGCGACAGTACACC...CAGCCTCGCCCTGACTCCAGCGGCAGCCACTAGACCGCGCCCGGCAGCCACCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR GCA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGTGCCGCTCCAGGGTCTaGAGGCTGGGCTCCGCCGTG +
Preference number: 4 (lower is better)
Translates to: LASPPLTLCPFTWQAASRCRSRV*RLGSAV
Trigger: CACGGCGGAGCCCAGCCTGCAGACCCTGGAGCGGCA...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR GCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGCTGCATCTCCACCAGTaGCTTGTGGCTGCCCGACAG +
Preference number: 4 (lower is better)
Translates to: ASAPARTWAHTAGSGPARLHLHQ*LVAARQ
Trigger: CTGTCGGGCAGCCACAAGGCACTGGTGGAGATGCAG...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACTCCTTAGTGGCCGGCTaGTCCCAGGGGACGGTCCTC +
Preference number: 4 (lower is better)
Translates to: GLGHRLAAAFRCDPSWRYSLVAG*SQGTVL
Trigger: GAGGACCGTCCCCTGGGAGCAGCCGGCCACTAAGGA...GTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGGGATGCTGGTCTCACTaGCGTAGCTGCTGCCACAGC +
Preference number: 4 (lower is better)
Translates to: ASAPARTWAHTAGSGPARGCWSH*RSCCHS
Trigger: GCTGTGGCAGCAGCTACGGCAGTGAGACCAGCATCC...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp TTGGCACGTGGGGTGGGTGGCTGCCGGGCGCGGTCTAGTGGCTGCCGCTGGAGTGGATGCTGGTCTCACTaGCGTAGCTGCTGCCACAGC +
Preference number: 4 (lower is better)
Translates to: LARGVGGCRARSSGCRWSGCWSH*RSCCHS
Trigger: GCTGTGGCAGCAGCTACGGCAGTGAGACCAGCATCC...ACTCCAGCGGCAGCCACTAGACCGCGCCCGGCAGCCACCCACCCCACGTGCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR GCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTGCGCGGTCTAGTGGCTaGCGCTGGAGTCAGGGCGAG +
Preference number: 4 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSARSSG*RWSQGE
Trigger: CTCGCCCTGACTCCAGCGGCAGCCACTAGACCGCGC...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGGGAGGGCAAGCGGCCTaGAGACGCGTCTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LASPPLTLCPFTWQAASRGGQAA*RRVWGR
Trigger: CCTGCCCCAGACGCGTCTGCAGGCCGCTTGCCCTCC...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGCTCCACGTGGCCCCTaGTGTCCACGGAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGAPRGP*CPRRAG
Trigger: CCCAGCCCTCCGTGGACAGCAGGGGCCACGTGGAGC...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACGATGTGGGGTGGCTCTaGCCTCCACGGCGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: GLGHRLAAAFRCDPSWRYDVGWL*PPRREA
Trigger: TGCTTCCCGCCGTGGAGGGCAGAGCCACCCCACATC...GTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGACGTGGCCATCCAGCTaGCCTCTGGCTGCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLTWPSS*PLAAPG
Trigger: GCCAGGGGCAGCCAGAGGGCAGCTGGATGGCCACGT...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGTCTGCTGGAAGGGGTTaGCGGCGCGGGGCGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LASPPLTLCPFTWQAASRSAGRG*RRGASR
Trigger: CCTGCTCGCCCCGCGCCGCCAACCCCTTCCAGCAGA...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTCCCGACAGCTTCTGCTaGAAGGGGTTGGCGGCGCGG +
Preference number: 4 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSPDSFC*KGLAAR
Trigger: CCGCGCCGCCAACCCCTTCCAGCAGAAGCTGTCGGG...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGCACAGCTGTACAGGCTaGGCATGTGGACGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWHSCTG*ACGRGR
Trigger: TCTACCGCGTCCACATGCCCAGCCTGTACAGCTGTG...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp TCAGGTGTGACCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTGTCCGCGGCCGGGATGCTaGTCTCACTGCCGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: SGVTRVGGTGPEPLRLHCPRPGC*SHCRSC
Trigger: GCAGCTACGGCAGTGAGACCAGCATCCCGGCCGCGG...ACAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTGCGTTGCTGACGGTGTaGGCCGCGGCCGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: GRRPRPQGPQSKARGRFIALLTV*AAAGML
Trigger: CAGCATCCCGGCCGCGGCCCACACCGTCAGCAACGC...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp AGTTGGCACGTGGGGTGGGTGGCTGCCGGGCGCGGTCTAGTGGCTGCCGCTGGAGGCGAGGCTGGCTCGTaGCGAGGTATTTGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: SWHVGWVAAGRGLVAAAGGEAGS*RGIWLS
Trigger: TGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCC...TCCAGCGGCAGCCACTAGACCGCGCCCGGCAGCCACCCACCCCACGTGCCAACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR CCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGGAGTCAGGGCGAGGCTaGCTCGTGGCGAGGTATTTG +
Preference number: 4 (lower is better)
Translates to: ASAPARTWAHTAGSGPARESGRG*LVARYL
Trigger: CAAATACCTCGCCACGAGCCAGCCTCGCCCTGACTC...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp AGTTGGCACGTGGGGTGGGTGGCTGCCGGGCGCGGTCTAGTGGCTGCCGCTGGAGAGTCAGGGCGAGGCTaGCTCGTGGCGAGGTATTTG +
Preference number: 4 (lower is better)
Translates to: SWHVGWVAAGRGLVAAAGESGRG*LVARYL
Trigger: CAAATACCTCGCCACGAGCCAGCCTCGCCCTGACTC...TCCAGCGGCAGCCACTAGACCGCGCCCGGCAGCCACCCACCCCACGTGCCAACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR CCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGCTCAGGCCGGGCTCCTaGGATGCTGTACCTGTCATG +
Preference number: 4 (lower is better)
Translates to: ASAPARTWAHTAGSGPARLRPGS*DAVPVM
Trigger: CATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAG...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp TCAGGTGTGACCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTGTGGCTGCCCCTGGCCTTaGCACAGGCATCGAGCCTCG +
Preference number: 4 (lower is better)
Translates to: SGVTRVGGTGPEPLRLHCGCPWP*HRHRAS
Trigger: CGAGGCTCGATGCCTGTGCCAAGGCCAGGGGCAGCC...ACAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGTCAGACGCCCCGGCTTaGGGCCCCAGGCCCATGGAC +
Preference number: 4 (lower is better)
Translates to: LASPPLTLCPFTWQAASRSDAPA*GPRPMD
Trigger: GTCCATGGGCCTGGGGCCCCAAGCCGGGGCGTCTGA...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACGGTGAGAGTGGGGGCTaGCCATGGCAGCAGGCACCA +
Preference number: 4 (lower is better)
Translates to: GLGHRLAAAFRCDPSWRYGESGG*PWQQAP
Trigger: TGGTGCCTGCTGCCATGGCCAGCCCCCACTCTCACC...GTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CGTCTGGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTGGGTGGCCCAGGTGGAATTGCATAGTGAGATaGGTGGGTGGGCAATGGGCC +
Preference number: 4 (lower is better)
Translates to: RLGQAWHGVRGSGGWPRWNCIVR*VGGQWA
Trigger: GGCCCATTGCCCACCCACCCATCTCACTATGCAATT...CCACCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTCCACAGGAGAGGCCCTaGTCCCCCGCCTGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: GRRPRPQGPQSKARGRFIPQERP*SPACPL
Trigger: AAGGGGGCAGGCGGGGGACCAGGGCCTCTCCTGTGG...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGGCACTGGGTGGCGGGTaGGCGGCCCGGGCTCCACGT +
Preference number: 4 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWALGGG*AARAPR
Trigger: ACGTGGAGCCCGGGCCGCTCACCCGCCACCCAGTGC...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGTGCAGGGCCCAGCCTTaGCCCCTGCACGTGGCCATC +
Preference number: 4 (lower is better)
Translates to: LASPPLTLCPFTWQAASRCRAQP*PLHVAI
Trigger: GATGGCCACGTGCAGGGGTCAAGGCTGGGCCCTGCA...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp TCAGGTGTGACCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTGTGCCCCAGGGAGGGGATaGGGACATTTCCGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SGVTRVGGTGPEPLRLHCAPGRG*GHFRSR
Trigger: CCTGGACCGGAAATGTCCTCATCCCCTCCCTGGGGC...ACAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp GGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACCAGAGGCCCCTCCACTaGGGTTTGGTCATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GLGHRLAAAFRCDPSWRYQRPLH*GLVMPG
Trigger: CCCAGGCATGACCAAACCTCAGTGGAGGGGCCTCTG...GTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGGGGGAGCACTCTCAGTaGGGTAAGCCCCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLGEHSQ*GKPLGS
Trigger: GGAGCCCAGGGGCTTACCTCACTGAGAGTGCTCCCC...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp TCAGGTGTGACCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTGTAAGTGGGGCAGCCGGTaGAGGAGGCTCACCCACCAG +
Preference number: 4 (lower is better)
Translates to: SGVTRVGGTGPEPLRLHCKWGSR*RRLTHQ
Trigger: CTGGTGGGTGAGCCTCCTGCACCGGCTGCCCCACTT...ACAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR GCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTTCCTTAGTGGCCGGCTaGTCCCAGGGGACGGTCCTC +
Preference number: 4 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSSLVAG*SQGTVL
Trigger: GAGGACCGTCCCCTGGGAGCAGCCGGCCACTAAGGA...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp AGTTGGCACGTGGGGTGGGTGGCTGCCGGGCGCGGTCTAGTGGCTGCCGCTGGAGCAGGTTCACCTCCGTaGCATTCAGCACCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SWHVGWVAAGRGLVAAAGAGSPP*HSAPPG
Trigger: TCCAGGAGGTGCTGAATGGCACGGAGGTGAACCTGC...TCCAGCGGCAGCCACTAGACCGCGCCCGGCAGCCACCCACCCCACGTGCCAACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR GCA 90 bp TTGGCACGTGGGGTGGGTGGCTGCCGGGCGCGGTCTAGTGGCTGCCGCTGGAGTTTTTGCTGCCAGGTGTaGGGGACGCTGCAGACGATG +
Preference number: 4 (lower is better)
Translates to: LARGVGGCRARSSGCRWSFCCQV*GTLQTM
Trigger: CATCGTCTGCAGCGTCCCGCACACCTGGCAGCAAAA...ACTCCAGCGGCAGCCACTAGACCGCGCCCGGCAGCCACCCACCCCACGTGCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR GCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGAGGTGGAAGCGGCAGTaGTGGCACGGGGAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLRWKRQ*WHGEGK
Trigger: CTTCCCCTCCCCGTGCCAGCACTGCCGCTTCCACCT...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACGCCAGGGCTTGTAGGTaGGGCGACCATCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GLGHRLAAAFRCDPSWRYARACR*GDHLQR
Trigger: CCTCTGCAGATGGTCGCCGCACCTACAAGCCCTGGC...GTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACAGGGGTCCACAGAAGTaGCGGGCGGGAGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: GLGHRLAAAFRCDPSWRYRGPQK*RAGGRR
Trigger: TCTCCTTCCTCCCGCCCGGCACTTCTGTGGACCCCT...GTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACAGGCGAGGAGGGCACTaGAGAGAGATGGGCACGTGG +
Preference number: 4 (lower is better)
Translates to: GLGHRLAAAFRCDPSWRYRRGGH*REMGTW
Trigger: CCACGTGCCCATCTCTCTGCAGTGCCCTCCTCGCCT...GTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTAACGGAGAGAGGCCCTaGTGGAGGGGGCCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSNGERP*WRGPLA
Trigger: TGCCAGAGGCCCCCTCCAGCAGGGCCTCTCTCCGTT...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp TCAGGTGTGACCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTGTTCCAGGCCCTTGGGCTaGCTGTCGGTCTGTGGCACC +
Preference number: 4 (lower is better)
Translates to: SGVTRVGGTGPEPLRLHCSRPLG*LSVCGT
Trigger: GGTGCCACAGACCGACAGGCAGCCCAAGGGCCTGGA...ACAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGTCCAGGCCCTTGGGCTaGCTGTCGGTCTGTGGCACC +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLSRPLG*LSVCGT
Trigger: GGTGCCACAGACCGACAGGCAGCCCAAGGGCCTGGA...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTACGTGGCCATCCAGCTaGCCTCTGGCTGCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: GRRPRPQGPQSKARGRFITWPSS*PLAAPG
Trigger: GCCAGGGGCAGCCAGAGGGCAGCTGGATGGCCACGT...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACCCCTGGGGTAGTGGATaGCTGCTGGGGAGCACTCTC +
Preference number: 4 (lower is better)
Translates to: GLGHRLAAAFRCDPSWRYPWGSG*LLGSTL
Trigger: GAGAGTGCTCCCCAGCAGGCATCCACTACCCCAGGG...GTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGTCTAGTGGCTGCCGCTaGAGTCAGGGCGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLSSGCR*SQGEAG
Trigger: GCCAGCCTCGCCCTGACTCCAGCGGCAGCCACTAGA...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGAGTCAGGGCGAGGCTGGCTCGTGGCGAGGTATTTGGCTCTCATGCTGGAGGTGGGGAAGTTGGCACGTaGGGTGGGTGGCTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: GVRARLARGEVFGSHAGGGEVGT*GGWLPG
Trigger: GCCCGGCAGCCACCCACCCCACGTGCCAACTTCCCC...ACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCCCTGACTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR CCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGGTGGGTGGCCCAGGTaGAAGCGGCAGTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGGGWPR*KRQCWH
Trigger: GTGCCAGCACTGCCGCTTCCACCTGGGCCACCCACC...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGCGTCTGGGGCAGGCCTaGCACGGCGTGCGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: APVGVARSWDGVVRNTAPRLGQA*HGVRGS
Trigger: GGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGAGGTGTGACCCGAGTTaGCGGTACGGGCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLRCDPS*RYGPRA
Trigger: GGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCT...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTGGCTGGGGCATCGGCTaGCAGCAGCGTTCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSGWGIG*QQRSGV
Trigger: CACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCC...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp TCAGGTGTGACCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTGTTGCCGGGATAGTGGGTaGCGTGCAGGGCTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: SGVTRVGGTGPEPLRLHCCRDSG*RAGLGH
Trigger: ATGCCCCAGCCCTGCACGCCACCCACTATCCCGGCA...ACAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTGAGGAAGGAGAGCTGTaGAGGGAAGGGCCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: GRRPRPQGPQSKARGRFIEEGEL*REGPGG
Trigger: GCCGCCCGGCCCTTCCCTCCACAGCTCTCCTTCCTC...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGGTAAACTGCTGGGGCTaGCGGCCCGCCCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: LASPPLTLCPFTWQAASRVNCWG*RPAPLQ
Trigger: CTGCAGTGGGGCGGGCCGCCAGCCCCAGCAGTTTAC...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAAACTGCTGGGGCTaGCGGCCCGCCCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGVNCWG*RPAPLQ
Trigger: CTGCAGTGGGGCGGGCCGCCAGCCCCAGCAGTTTAC...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGCGAGGCTGGAAGCCCTaGCCTCACCGCCTCTCACGC +
Preference number: 4 (lower is better)
Translates to: LASPPLTLCPFTWQAASRRGWKP*PHRLSR
Trigger: GCGTGAGAGGCGGTGAGGCCAGGGCTTCCAGCCTCG...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGCTCCCAACGAGGCTGTaGGCCTGGGGGCTGCAAGAC +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLLPTRL*AWGLQD
Trigger: GTCTTGCAGCCCCCAGGCCCACAGCCTCGTTGGGAG...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGCAGTACATACAGCCATaGCCCTACAGAGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWQYIQP*PYRGWR
Trigger: CCTCCAGCCTCTGTAGGGCCATGGCTGTATGTACTG...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp TCAGGTGTGACCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTGTAGAGGGCCAGGTAGATaGGGCCCTCCACGCCGTCAT +
Preference number: 4 (lower is better)
Translates to: SGVTRVGGTGPEPLRLHCRGPGR*GPPRRH
Trigger: ATGACGGCGTGGAGGGCCTCATCTACCTGGCCCTCT...ACAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGACCTCAGGGCAGAGATaGGCAGGTGGCACGTGTCCC +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLTSGQR*AGGTCP
Trigger: GGGACACGTGCCACCTGCTCATCTCTGCCCTGAGGT...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGGGGGAGCACTCTCAGTaGGGTAAGCCCCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LASPPLTLCPFTWQAASRGEHSQ*GKPLGS
Trigger: GGAGCCCAGGGGCTTACCTCACTGAGAGTGCTCCCC...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTAAGTGGGGCAGCCGGTaGAGGAGGCTCACCCACCAG +
Preference number: 4 (lower is better)
Translates to: GRRPRPQGPQSKARGRFIKWGSR*RRLTHQ
Trigger: CTGGTGGGTGAGCCTCCTGCACCGGCTGCCCCACTT...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR GCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGACTGCCCGACAGCTTCTaGTGGAAGGGGTTGGCGGCG +
Preference number: 4 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGLPDSF*WKGLAA
Trigger: CGCCGCCAACCCCTTCCAGCAGAAGCTGTCGGGCAG...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAAGTCCAGATGCAGGCTaGGGCAGTCCACCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGSPDAG*GSPPGR
Trigger: CCGCCCTGGTGGACTGCCGCAGCCTGCATCTGGACT...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GGAGTCAGGGCGAGGCTGGCTCGTGGCGAGGTATTTGGCTCTCATGCTGGAGGTGCGCGGTCTAGTGGCTaGCGCTGGAGTCAGGGCGAG +
Preference number: 4 (lower is better)
Translates to: GVRARLARGEVFGSHAGGARSSG*RWSQGE
Trigger: CTCGCCCTGACTCCAGCGGCAGCCACTAGACCGCGC...ACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCCCTGACTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR GCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGGGAGGGCAAGCGGCCTaGAGACGCGTCTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: APVGVARSWDGVVRNTAPGGQAA*RRVWGR
Trigger: CCTGCCCCAGACGCGTCTGCAGGCCGCTTGCCCTCC...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp TCAGGTGTGACCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTGTTCTGCAGAGGGAGCGTaGCGGGATAGTGGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: SGVTRVGGTGPEPLRLHCSAEGA*RDSGWR
Trigger: ACGCCACCCACTATCCCGGCACGCTCCCTCTGCAGA...ACAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTAGGGGTCCACAGAAGTaGCGGGCGGGAGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSRGPQK*RAGGRR
Trigger: TCTCCTTCCTCCCGCCCGGCACTTCTGTGGACCCCT...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp TCAGGTGTGACCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTGTAGGCGAGGAGGGCACTaGAGAGAGATGGGCACGTGG +
Preference number: 4 (lower is better)
Translates to: SGVTRVGGTGPEPLRLHCRRGGH*REMGTW
Trigger: CCACGTGCCCATCTCTCTGCAGTGCCCTCCTCGCCT...ACAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACGCCGGGCTCCTGGGATaGTGTACCTGTCATGGATGG +
Preference number: 4 (lower is better)
Translates to: GLGHRLAAAFRCDPSWRYAGLLG*CTCHGW
Trigger: CCATCCATGACAGGTACAGCATCCCAGGAGCCCGGC...GTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGGATGTGGGGTGGCTCTaGCCTCCACGGCGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: LASPPLTLCPFTWQAASRDVGWL*PPRREA
Trigger: TGCTTCCCGCCGTGGAGGGCAGAGCCACCCCACATC...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGACCCAGCCTTGACCCCTaGACGTGGCCATCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGPSLDP*TWPSSC
Trigger: GCAGCTGGATGGCCACGTGCAGGGGTCAAGGCTGGG...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGACATGCGTCTGTAAACTaGTGGGGCTGGCGGCCCGCC +
Preference number: 4 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGHASVN*WGWRPA
Trigger: GGCGGGCCGCCAGCCCCAGCAGTTTACAGACGCATG...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACCAGGTAGCTGCCGGCTaGTCTGGGAGGAAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: GLGHRLAAAFRCDPSWRYQVAAG*SGRKSH
Trigger: ATGGCTCTTCCTCCCAGAGCAGCCGGCAGCTACCTG...GTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GTCAGGGCGAGGCTGGCTCGTGGCGAGGTATTTGGCTCTCATGCTGGAGGTGTAGCCAGCCCGCGTGGCTaGCAGAGTCCAGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: VRARLARGEVFGSHAGGVASPRG*QSPGQP
Trigger: TGGCTGCCCTGGACTCTGGCAGCCACGCGGGCTGGC...TACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCCCTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR CCA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGCAGCTCAGGTCGAAGTaGGGCAGCCGGTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LASPPLTLCPFTWQAASRQLRSK*GSRCRR
Trigger: CCTCCTGCACCGGCTGCCCCACTTCGACCTGAGCTG...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTCAGCTCAGGTCGAAGTaGGGCAGCCGGTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GRRPRPQGPQSKARGRFIQLRSK*GSRCRR
Trigger: CCTCCTGCACCGGCTGCCCCACTTCGACCTGAGCTG...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR CCA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGTCCTCGGGCCGGAACTaGCTGCTAGTGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LASPPLTLCPFTWQAASRSSGRN*LLVASQ
Trigger: CTGGGAGGCCACTAGCAGCCAGTTCCGGCCCGAGGA...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACGGCGGAGCGAGTAGGTaGCCCTATGGATGCCATCAC +
Preference number: 4 (lower is better)
Translates to: GLGHRLAAAFRCDPSWRYGGASR*PYGCHH
Trigger: GTGATGGCATCCATAGGGCCACCTACTCGCTCCGCC...GTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR CCA 90 bp GCGAGGCTGGCTCGTGGCGAGGTATTTGGCTCTCATGCTGGAGGTGTACTGTCGGCGTTGCTGACGGTGTaGGCCGCGGCCGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: ARLARGEVFGSHAGGVLSALLTV*AAAGML
Trigger: CAGCATCCCGGCCGCGGCCCACACCGTCAGCAACGC...CGACAGTACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR CCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGTCACAGCGGGGGTTCTaGAAATTAGCGTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWSQRGF*KLAFWL
Trigger: GAGCCAGAACGCTAATTTCCAGAACCCCCGCTGTGA...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTCTCGCGCCCAATGAGTaGGGTGTTCTCACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSLAPNE*GVLTAG
Trigger: CCCCGCTGTGAGAACACCCCACTCATTGGGCGCGAG...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGAGTTGGCACGTGGGGTaGGTGGCTGCCGGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: APVGVARSWDGVVRNTAPSWHVG*VAAGRG
Trigger: ACCGCGCCCGGCAGCCACCCACCCCACGTGCCAACT...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGGGTGGCGTGCAGGGCTaGGGCATCGGCTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: APVGVARSWDGVVRNTAPGGVQG*GIGWQQ
Trigger: CTGCTGCCAGCCGATGCCCCAGCCCTGCACGCCACC...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACGCAGAGATGAGCAGGTaGCACGTGTCCCTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: GLGHRLAAAFRCDPSWRYAEMSR*HVSLSL
Trigger: GAGGGACAGGGACACGTGCCACCTGCTCATCTCTGC...GTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGGGCCCGGGCTCCACGTaGCCCCTGCTGTCCACGGAG +
Preference number: 4 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWGPGST*PLLSTE
Trigger: CTCCGTGGACAGCAGGGGCCACGTGGAGCCCGGGCC...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGGAAGGCGGCCAGCACTaGGTGGCGGGTGAGCGGCCC +
Preference number: 4 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWEGGQH*VAGERP
Trigger: GGGCCGCTCACCCGCCACCCAGTGCTGGCCGCCTTC...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp TCAGGTGTGACCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTGTCAGCTGCCCAGTCTCTaGGTGGGGGAAGGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: SGVTRVGGTGPEPLRLHCQLPSL*VGEGGL
Trigger: CAAACCCCCTTCCCCCACCCAGAGACTGGGCAGCTG...ACAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGGGGTGTCCAGGCCCTTaGGCTGCCTGTCGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LASPPLTLCPFTWQAASRGCPGP*AACRSV
Trigger: CACAGACCGACAGGCAGCCCAAGGGCCTGGACACCC...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAAGGGGCAGCACCTGCCTaGGGAGGGGTGTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMEGAAPA*GGVSRP
Trigger: GGGCCTGGACACCCCTCCCCAGGCAGGTGCTGCCCC...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGGATCCTGATGTGGGGTaGCTCTGCCCTCCACGGCGG +
Preference number: 4 (lower is better)
Translates to: LASPPLTLCPFTWQAASRDPDVG*LCPPRR
Trigger: CCGCCGTGGAGGGCAGAGCCACCCCACATCAGGATC...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGCGTCCGATCCTGATGTaGGGTGGCTCTGCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLRPILM*GGSALH
Trigger: GTGGAGGGCAGAGCCACCCCACATCAGGATCGGACG...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CGTCTGGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTGGGTGGCCCAGGTGGCATATTCCCCCTTTTTaGTCCCAGACACCAGCACAA +
Preference number: 4 (lower is better)
Translates to: RLGQAWHGVRGSGGWPRWHIPPF*SQTPAQ
Trigger: TTGTGCTGGTGTCTGGGACCAAAAAGGGGGAATATG...CCACCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGTCAGACGCCCCGGCTTaGGGCCCCAGGCCCATGGAC +
Preference number: 4 (lower is better)
Translates to: APVGVARSWDGVVRNTAPSDAPA*GPRPMD
Trigger: GTCCATGGGCCTGGGGCCCCAAGCCGGGGCGTCTGA...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGGCCCAGAGGAAAGACTaGGCAGGTTGGCTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLAQRKD*AGWLWR
Trigger: CCGCCACAGCCAACCTGCCCAGTCTTTCCTCTGGGC...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGGGTGTGGCGAGGTCATaGGATGGAGTAGTTAGGAAC +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWGVARS*DGVVRN
Trigger: GTTCCTAACTACTCCATCCCATGACCTCGCCACACC...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGACCTGCAGGCAAACCTaGGAGTGCGCCAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLTCRQT*ECARAQ
Trigger: CTGTGCCCTGGCGCACTCCCAGGTTTGCCTGCAGGT...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403167.5
CDS-3UTR TCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTCCTTGGAGCTGCGGATaGGGCCAACCAGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: GRRPRPQGPQSKARGRFIPWSCG*GQPAPG
Trigger: TCCTGGTGCTGGTTGGCCTCATCCGCAGCTCCAAGG...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000403167.5
CDS-3UTR TCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTAGTCCACCAGGGCGGTaGGGTGCTGCAGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: GRRPRPQGPQSKARGRFISPPGR*GAAGSP
Trigger: AGGTGAACCTGCAGCACCTCACCGCCCTGGTGGACT...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAAGAGGGCCAGGTAGATaGGGCCCTCCACGCCGTCAT +
Preference number: 4 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGRGPGR*GPPRRH
Trigger: ATGACGGCGTGGAGGGCCTCATCTACCTGGCCCTCT...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGGGACTCGCGCCCAATaGGTGGGGTGTTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGGTRAQ*VGCSHS
Trigger: GCTGTGAGAACACCCCACTCATTGGGCGCGAGTCCC...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTGGGACTCGCGCCCAATaGGTGGGGTGTTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: GRRPRPQGPQSKARGRFIGTRAQ*VGCSHS
Trigger: GCTGTGAGAACACCCCACTCATTGGGCGCGAGTCCC...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTACGCTACTGCAGCCTTaGCTCCCAGACAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSTLLQP*LPDSCS
Trigger: GGAGCAGCTGTCTGGGAGTCAAGGCTGCAGTAGCGT...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGCAGCCAGGCGGGGCCTaGAGCAGAGGCCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWQPGGA*SRGPST
Trigger: AGTGGAGGGGCCTCTGCTTCAGGCCCCGCCTGGCTG...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGGGTGCTCCTCGCTCTTaGGCCGCCGGCAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWGAPRS*AAGSTA
Trigger: GGCTGTGCTGCCGGCGGCGCAAGAGCGAGGAGCACC...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR GCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTAGAATCCCACTGCGATaGCGGCGCTGCACACCAGCG +
Preference number: 4 (lower is better)
Translates to: GRRPRPQGPQSKARGRFIRIPLR*RRCTPA
Trigger: CGCTGGTGTGCAGCGCCGGCATCGCAGTGGGATTCT...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR GCA 90 bp GGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACCACTGGTCTCCCCGTTaGCGTAGAATCCCACTGCGA +
Preference number: 4 (lower is better)
Translates to: GLGHRLAAAFRCDPSWRYHWSPR*RRIPLR
Trigger: TCGCAGTGGGATTCTACGGCAACGGGGAGACCAGTG...GTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR GCA 90 bp TCAGGTGTGACCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTGTCCAGTGCCTTGTGGCTaGCCGACAGCTTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SGVTRVGGTGPEPLRLHCPVPCG*PTASAG
Trigger: TCCAGCAGAAGCTGTCGGGCAGCCACAAGGCACTGG...ACAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTCTGCATCTCCACCAGTaGCTTGTGGCTGCCCGACAG +
Preference number: 4 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSLHLHQ*LVAARQ
Trigger: CTGTCGGGCAGCCACAAGGCACTGGTGGAGATGCAG...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGAGGGCGGTGAGGTGCTaGAGGTTCACCTCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: LASPPLTLCPFTWQAASRRAVRC*RFTSVP
Trigger: TGGCACGGAGGTGAACCTGCAGCACCTCACCGCCCT...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp TCAGGTGTGACCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTGTTCAGGGCCTCTCTTTTaGTGCCAGGTGTGCGGGACG +
Preference number: 4 (lower is better)
Translates to: SGVTRVGGTGPEPLRLHCSGPLF*CQVCGT
Trigger: CGTCCCGCACACCTGGCAGCAAAAGAGAGGCCCTGA...ACAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp TCAGGTGTGACCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTGTCACTGCCGTAGCTGCTaGCACAGCTGTACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SGVTRVGGTGPEPLRLHCHCRSC*HSCTGW
Trigger: CCAGCCTGTACAGCTGTGGCAGCAGCTACGGCAGTG...ACAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGGGATGCTGGTCTCACTaGCGTAGCTGCTGCCACAGC +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLGCWSH*RSCCHS
Trigger: GCTGTGGCAGCAGCTACGGCAGTGAGACCAGCATCC...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAAGGGCCGCGGCCGGGATaGTGGTCTCACTGCCGTAGC +
Preference number: 4 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMEGPRPG*WSHCRS
Trigger: GCTACGGCAGTGAGACCAGCATCCCGGCCGCGGCCC...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGTCTGCAGAGGGAGCGTaGCGGGATAGTGGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: LASPPLTLCPFTWQAASRSAEGA*RDSGWR
Trigger: ACGCCACCCACTATCCCGGCACGCTCCCTCTGCAGA...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTGCCAGGGCTTGTAGGTaGGGCGACCATCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GRRPRPQGPQSKARGRFIARACR*GDHLQR
Trigger: CCTCTGCAGATGGTCGCCGCACCTACAAGCCCTGGC...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTAGGGGTCCACAGAAGTaGCGGGCGGGAGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: GRRPRPQGPQSKARGRFIRGPQK*RAGGRR
Trigger: TCTCCTTCCTCCCGCCCGGCACTTCTGTGGACCCCT...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAAGGCGAGGAGGGCACTaGAGAGAGATGGGCACGTGG +
Preference number: 4 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGRRGGH*REMGTW
Trigger: CCACGTGCCCATCTCTCTGCAGTGCCCTCCTCGCCT...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGCAGGCACCAGCCAGATaGCCCAGTAGGTGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: LASPPLTLCPFTWQAASRQAPAR*PSRCGE
Trigger: CTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTG...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGGGGGTAGTGGATGCCTaGTGGGGAGCACTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLGVVDA*WGALSV
Trigger: CACTGAGAGTGCTCCCCAGCAGGCATCCACTACCCC...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGACCCTGGGGTAGTGGATaGCTGCTGGGGAGCACTCTC +
Preference number: 4 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGPWGSG*LLGSTL
Trigger: GAGAGTGCTCCCCAGCAGGCATCCACTACCCCAGGG...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGGGCGGAGCGAGTAGGTaGCCCTATGGATGCCATCAC +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLGGASR*PYGCHH
Trigger: GTGATGGCATCCATAGGGCCACCTACTCGCTCCGCC...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGCGGCCACCGTGCGGTTaGCGTGGCGGAGCGAGTAGG +
Preference number: 4 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWRPPCG*RGGASR
Trigger: CCTACTCGCTCCGCCACGCCAACCGCACGGTGGCCG...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR CCA 90 bp ACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGGAGTCCCACACGCGGTCCTaGACCCCGGCCACCGTGCGG +
Preference number: 4 (lower is better)
Translates to: TLVSRKSQTGTHAHHGQESHTRS*TPATVR
Trigger: CCGCACGGTGGCCGGGGTCCAGGACCGCGTGTGGGA...CTCCTGACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR CCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGTCCTCCAAAAGGGGATaGCGGCCGTGTAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLSSKRG*RPCSPA
Trigger: TGCTGGGCTACACGGCCGCCATCCCCTTTTGGAGGA...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTCCACACAGAAGTCGCTaGAGCCCACGGACACAGCCA +
Preference number: 4 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSPHRSR*SPRTQP
Trigger: TGGCTGTGTCCGTGGGCTCCAGCGACTTCTGTGTGG...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGTCTGCTGGAAGGGGTTaGCGGCGCGGGGCGAGCAGG +
Preference number: 4 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWSAGRG*RRGASR
Trigger: CCTGCTCGCCCCGCGCCGCCAACCCCTTCCAGCAGA...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGCCCGACAGCTTCTGCTaGAAGGGGTTGGCGGCGCGG +
Preference number: 4 (lower is better)
Translates to: APVGVARSWDGVVRNTAPPDSFC*KGLAAR
Trigger: CCGCGCCGCCAACCCCTTCCAGCAGAAGCTGTCGGG...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp TCAGGTGTGACCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTGTTCCACCAGTGCCTTGTaGCTGCCCGACAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SGVTRVGGTGPEPLRLHCSTSAL*LPDSFC
Trigger: GCAGAAGCTGTCGGGCAGCCACAAGGCACTGGTGGA...ACAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGTCCACCAGTGCCTTGTaGCTGCCCGACAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLSTSAL*LPDSFC
Trigger: GCAGAAGCTGTCGGGCAGCCACAAGGCACTGGTGGA...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGGGCGAGGCTGGCTCGTaGCGAGGTATTTGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLGEAGS*RGIWLS
Trigger: TGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCC...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGGGGGAAGTTGGCACGTaGGGTGGGTGGCTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWGEVGT*GGWLPG
Trigger: GCCCGGCAGCCACCCACCCCACGTGCCAACTTCCCC...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGATGGAAGCGGCAGTGCTaGCACGGGGAGGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGWKRQC*HGEGKL
Trigger: CAACTTCCCCTCCCCGTGCCAGCACTGCCGCTTCCA...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGCGTGCGAGGGTCCGGTaGGTGGCCCAGGTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWRARVR*VAQVEA
Trigger: CGCTTCCACCTGGGCCACCCACCGGACCCTCGCACG...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACGGCAACAACACAGGTTaGGTGCGGCCAGGGCTTGTA +
Preference number: 4 (lower is better)
Translates to: GLGHRLAAAFRCDPSWRYGNNTG*VRPGLV
Trigger: TACAAGCCCTGGCCGCACCCAACCTGTGTTGTTGCC...GTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGCTCAGGCCGGGCTCCTaGGATGCTGTACCTGTCATG +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLLRPGS*DAVPVM
Trigger: CATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAG...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGCTGCCTGTCGGTCTGTaGCACCCCCTGGAGCACCCC +
Preference number: 4 (lower is better)
Translates to: APVGVARSWDGVVRNTAPLPVGL*HPLEHP
Trigger: GGGGTGCTCCAGGGGGTGCCACAGACCGACAGGCAG...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTCTCGCTCCCACTTCATaGGGAGGAGACCGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GRRPRPQGPQSKARGRFILAPTS*GGDRGH
Trigger: GTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAG...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTCGTCCGATCCTGATGTaGGGTGGCTCTGCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: GRRPRPQGPQSKARGRFIRPILM*GGSALH
Trigger: GTGGAGGGCAGAGCCACCCCACATCAGGATCGGACG...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGAGGTTTGGTCATGCCTaGGGAGCTCAGACGCCCCGG +
Preference number: 4 (lower is better)
Translates to: LASPPLTLCPFTWQAASRRFGHA*GAQTPR
Trigger: CCGGGGCGTCTGAGCTCCCCAGGCATGACCAAACCT...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp ACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGGAGCGGTCGCAGGGCGTTTaGCGGGCACCCACGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TLVSRKSQTGTHAHHGQERSQGV*RAPTPG
Trigger: CCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGACCG...CTCCTGACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGAGAGCGTCTGGGTCATaGGGACTGGTGTCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: ASAPARTWAHTAGSGPARRASGS*GLVSVL
Trigger: AAGAACTGACACCAGTCCCCATGACCCAGACGCTCT...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403167.5
CDS-3UTR TCA 90 bp GGAGTCAGGGCGAGGCTGGCTCGTGGCGAGGTATTTGGCTCTCATGCTGGAGGTAGAGGGCCAGGTAGATaGGGCCCTCCACGCCGTCAT +
Preference number: 4 (lower is better)
Translates to: GVRARLARGEVFGSHAGGRGPGR*GPPRRH
Trigger: ATGACGGCGTGGAGGGCCTCATCTACCTGGCCCTCT...ACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCCCTGACTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR TCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTCCCCAGCCGTGCCTGTaGACTAAGAAGGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: GRRPRPQGPQSKARGRFIPQPCL*TKKGST
Trigger: TGTGGACCCCTTCTTAGTTCACAGGCACGGCTGGGG...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGGGGGAGCACTCTCAGTaGGGTAAGCCCCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: APVGVARSWDGVVRNTAPGEHSQ*GKPLGS
Trigger: GGAGCCCAGGGGCTTACCTCACTGAGAGTGCTCCCC...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTCACTGGTCTCCCCGTTaGCGTAGAATCCCACTGCGA +
Preference number: 4 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSHWSPR*RRIPLR
Trigger: TCGCAGTGGGATTCTACGGCAACGGGGAGACCAGTG...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR GCA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGCCAGTGCCTTGTGGCTaGCCGACAGCTTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LASPPLTLCPFTWQAASRPVPCG*PTASAG
Trigger: TCCAGCAGAAGCTGTCGGGCAGCCACAAGGCACTGG...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTCCAGTGCCTTGTGGCTaGCCGACAGCTTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: GRRPRPQGPQSKARGRFIPVPCG*PTASAG
Trigger: TCCAGCAGAAGCTGTCGGGCAGCCACAAGGCACTGG...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGTTTTGCTGCCAGGTGTaGGGGACGCTGCAGACGATG +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLFCCQV*GTLQTM
Trigger: CATCGTCTGCAGCGTCCCGCACACCTGGCAGCAAAA...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGTCTCACTGCCGTAGCTaGTGCCACAGCTGTACAGGC +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLSHCRS*CHSCTG
Trigger: GCCTGTACAGCTGTGGCAGCAGCTACGGCAGTGAGA...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGGATGCTGGTCTCACTaGCGTAGCTGCTGCCACAGC +
Preference number: 4 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGGCWSH*RSCCHS
Trigger: GCTGTGGCAGCAGCTACGGCAGTGAGACCAGCATCC...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp TGGCTCGTGGCGAGGTATTTGGCTCTCATGCTGGAGGTGTACTGTCGCTCTGAGGGGCCGCGGCCGGGATaGTGGTCTCACTGCCGTAGC +
Preference number: 4 (lower is better)
Translates to: WLVARYLALMLEVYCRSEGPRPG*WSHCRS
Trigger: GCTACGGCAGTGAGACCAGCATCCCGGCCGCGGCCC...CTCAGAGCGACAGTACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR GCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAAGCGCGGTCTAGTGGCTaGCGCTGGAGTCAGGGCGAG +
Preference number: 4 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMEARSSG*RWSQGE
Trigger: CTCGCCCTGACTCCAGCGGCAGCCACTAGACCGCGC...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CGAGGCTGGCTCGTGGCGAGGTATTTGGCTCTCATGCTGGAGGTGTACTGTCGCAGGTGGAAGCGGCAGTaGTGGCACGGGGAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: RGWLVARYLALMLEVYCRRWKRQ*WHGEGK
Trigger: CTTCCCCTCCCCGTGCCAGCACTGCCGCTTCCACCT...GCGACAGTACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR GCA 90 bp ACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGGAGCGGGCCCAGAGCCCCTaGGTCTCCACTGTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: TLVSRKSQTGTHAHHGQERAQSP*VSTVPL
Trigger: CAGGGGCACAGTGGAGACGCAGGGGCTCTGGGCCCG...CTCCTGACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp TCAGGTGTGACCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTGTCCCGCAGCCCCAGCCTaGCCTAGAGATGACAAATGT +
Preference number: 4 (lower is better)
Translates to: SGVTRVGGTGPEPLRLHCPAAPA*PRDDKC
Trigger: ACATTTGTCATCTCTAGGGCAGGCTGGGGCTGCGGG...ACAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGACTGAGGTTTGGTCATaGCTGGGGAGCTCAGACGCC +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLTEVWS*LGSSDA
Trigger: GGCGTCTGAGCTCCCCAGGCATGACCAAACCTCAGT...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGGCTTGGAACTCGAATTaGATAGTGAGATGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWAWNSN*IVRWVG
Trigger: ACCCACCCATCTCACTATGCAATTCGAGTTCCAAGC...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGCCATTCAGCACCTCCTaGACGCGGAGGAGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: APVGVARSWDGVVRNTAPPFSTS*TRRRGS
Trigger: GGACCCCCTCCTCCGCGTCCAGGAGGTGCTGAATGG...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGTGCCGGGATAGTGGGTaGCGTGCAGGGCTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: APVGVARSWDGVVRNTAPCRDSG*RAGLGH
Trigger: ATGCCCCAGCCCTGCACGCCACCCACTATCCCGGCA...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGCAGAGATGAGCAGGTaGCACGTGTCCCTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGAEMSR*HVSLSL
Trigger: GAGGGACAGGGACACGTGCCACCTGCTCATCTCTGC...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGGATCCTGATGTGGGGTaGCTCTGCCCTCCACGGCGG +
Preference number: 4 (lower is better)
Translates to: APVGVARSWDGVVRNTAPDPDVG*LCPPRR
Trigger: CCGCCGTGGAGGGCAGAGCCACCCCACATCAGGATC...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGCTATGTCCATTCACCTaGCAGGCAGCCTCACGGCCA +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLLCPFT*QAASRP
Trigger: TGGCCGTGAGGCTGCCTGCCAGGTGAATGGACATAG...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGGAGACAGCACGAGGCTaGAAGCCCTGGCCTCACCGC +
Preference number: 4 (lower is better)
Translates to: APVGVARSWDGVVRNTAPETARG*KPWPHR
Trigger: GCGGTGAGGCCAGGGCTTCCAGCCTCGTGCTGTCTC...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTGTAGTGGATGCCTGCTaGGGAGCACTCTCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSVVDAC*GALSVR
Trigger: CCTCACTGAGAGTGCTCCCCAGCAGGCATCCACTAC...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGGGGGGAAATGCAAAATaGTTCAGGCCTCAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: ASAPARTWAHTAGSGPARGGNAK*FRPQFL
Trigger: CAGGAACTGAGGCCTGAACCATTTTGCATTTCCCCC...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGGGGACTCGCGCCCAATaGGTGGGGTGTTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: APVGVARSWDGVVRNTAPGTRAQ*VGCSHS
Trigger: GCTGTGAGAACACCCCACTCATTGGGCGCGAGTCCC...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGACCTCAGGGCAGAGATaGGCAGGTGGCACGTGTCCC +
Preference number: 4 (lower is better)
Translates to: APVGVARSWDGVVRNTAPTSGQR*AGGTCP
Trigger: GGGACACGTGCCACCTGCTCATCTCTGCCCTGAGGT...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGACAGCATTTGTGCTTCTaGGCGGTCGCAGGGCGTTTG +
Preference number: 4 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGQHLCF*AVAGRL
Trigger: CAAACGCCCTGCGACCGCTCAGAAGCACAAATGCTG...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGGCCGTAGAATCCCACTaGGATGCCGGCGCTGCACAC +
Preference number: 4 (lower is better)
Translates to: APVGVARSWDGVVRNTAPAVESH*DAGAAH
Trigger: GTGTGCAGCGCCGGCATCGCAGTGGGATTCTACGGC...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR GCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGCTGCCCGACAGCTTCTaGTGGAAGGGGTTGGCGGCG +
Preference number: 4 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWLPDSF*WKGLAA
Trigger: CGCCGCCAACCCCTTCCAGCAGAAGCTGTCGGGCAG...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAATCCTTAGTGGCCGGCTaGTCCCAGGGGACGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMESLVAG*SQGTVL
Trigger: GAGGACCGTCCCCTGGGAGCAGCCGGCCACTAAGGA...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGAGGGCGGTGAGGTGCTaGAGGTTCACCTCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: APVGVARSWDGVVRNTAPRAVRC*RFTSVP
Trigger: TGGCACGGAGGTGAACCTGCAGCACCTCACCGCCCT...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGGGGCCTCTCTTTTGCTaGCAGGTGTGCGGGACGCTG +
Preference number: 4 (lower is better)
Translates to: APVGVARSWDGVVRNTAPGPLFC*QVCGTL
Trigger: CAGCGTCCCGCACACCTGGCAGCAAAAGAGAGGCCC...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GGAGTCAGGGCGAGGCTGGCTCGTGGCGAGGTATTTGGCTCTCATGCTGGAGGTCACTGCCGTAGCTGCTaGCACAGCTGTACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GVRARLARGEVFGSHAGGHCRSC*HSCTGW
Trigger: CCAGCCTGTACAGCTGTGGCAGCAGCTACGGCAGTG...ACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCCCTGACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR GCA 90 bp GGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACGGTATTTGGCTCTCATaGTGGAGGTGTATGAGGGCG +
Preference number: 4 (lower is better)
Translates to: GLGHRLAAAFRCDPSWRYGIWLS*WRCMRA
Trigger: CGCCCTCATACACCTCCAGCATGAGAGCCAAATACC...GTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGAGGTGGAAGCGGCAGTaGTGGCACGGGGAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWRWKRQ*WHGEGK
Trigger: CTTCCCCTCCCCGTGCCAGCACTGCCGCTTCCACCT...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGATGAAGAAACGCTACTaGAGCCTTGACTCCCAGACA +
Preference number: 4 (lower is better)
Translates to: ASAPARTWAHTAGSGPARMKKRY*SLDSQT
Trigger: TGTCTGGGAGTCAAGGCTGCAGTAGCGTTTCTTCAT...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp TCAGGTGTGACCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTGTTGGGAGGAAGAGCCATaGGTCTGTAAACTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SGVTRVGGTGPEPLRLHCWEEEP*VCKLLG
Trigger: CCCCAGCAGTTTACAGACGCATGGCTCTTCCTCCCA...ACAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAACCAGGGTCTGCAGGCTaGGCTCCGCCGTGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMEPGSAG*APPCGS
Trigger: TGAACCACACGGCGGAGCCCAGCCTGCAGACCCTGG...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTCACAGCTGTACAGGCTaGGCATGTGGACGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: GRRPRPQGPQSKARGRFIHSCTG*ACGRGR
Trigger: TCTACCGCGTCCACATGCCCAGCCTGTACAGCTGTG...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTATTTGGCTCTCATGCTaGAGGTGTATGAGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSIWLSC*RCMRAA
Trigger: CGCCGCCCTCATACACCTCCAGCATGAGAGCCAAAT...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GTCAGGGCGAGGCTGGCTCGTGGCGAGGTATTTGGCTCTCATGCTGGAGGTGTATGGAAGCGGCAGTGCTaGCACGGGGAGGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: VRARLARGEVFGSHAGGVWKRQC*HGEGKL
Trigger: CAACTTCCCCTCCCCGTGCCAGCACTGCCGCTTCCA...TACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCCCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR CCA 90 bp TGGCTCGTGGCGAGGTATTTGGCTCTCATGCTGGAGGTGTACTGTCGCTCTGAGGGTGGGTGGCCCAGGTaGAAGCGGCAGTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: WLVARYLALMLEVYCRSEGGWPR*KRQCWH
Trigger: GTGCCAGCACTGCCGCTTCCACCTGGGCCACCCACC...CTCAGAGCGACAGTACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR CCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTGCCTGCAGACGCGTCTaGGGCAGGCCTGGCACGGCG +
Preference number: 4 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGACRRV*GRPGTA
Trigger: CGCCGTGCCAGGCCTGCCCCAGACGCGTCTGCAGGC...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAAGGCTGGGGCATCGGCTaGCAGCAGCGTTCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMEGWGIG*QQRSGV
Trigger: CACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCC...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTGGCAACAACACAGGTTaGGTGCGGCCAGGGCTTGTA +
Preference number: 4 (lower is better)
Translates to: GRRPRPQGPQSKARGRFIGNNTG*VRPGLV
Trigger: TACAAGCCCTGGCCGCACCCAACCTGTGTTGTTGCC...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGGGCACTGCAGAGAGATaGGCACGTGGAGGGACCACG +
Preference number: 4 (lower is better)
Translates to: APVGVARSWDGVVRNTAPGTAER*ARGGTT
Trigger: CGTGGTCCCTCCACGTGCCCATCTCTCTGCAGTGCC...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGAGCCAAAAGCACCATTaGGGAGCCTCGCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLSQKHH*GASLPL
Trigger: AAGTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCT...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGGCCCAGAGGAAAGACTaGGCAGGTTGGCTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: APVGVARSWDGVVRNTAPAQRKD*AGWLWR
Trigger: CCGCCACAGCCAACCTGCCCAGTCTTTCCTCTGGGC...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACCGGTCGCAGGGCGTTTaGCGGGCACCCACGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHRSQGV*RAPTPG
Trigger: CCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGACCG...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGGAGACAGCACGAGGCTaGAAGCCCTGGCCTCACCGC +
Preference number: 4 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWETARG*KPWPHR
Trigger: GCGGTGAGGCCAGGGCTTCCAGCCTCGTGCTGTCTC...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGTGGGTGGGTGGGCAATaGGCCAGGGGCTGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWWVGGQ*ARGCSQ
Trigger: TTGGGAGCAGCCCCTGGCCCATTGCCCACCCACCCA...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAAGACCTCCAGTGGCCCTaGGCCACACCCTGCCCATCA +
Preference number: 4 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMEDLQWP*ATPCPS
Trigger: TGATGGGCAGGGTGTGGCCCAGGGCCACTGGAGGTC...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403167.5
CDS-3UTR TCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGCCTTGGAGCTGCGGATaGGGCCAACCAGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWPWSCG*GQPAPG
Trigger: TCCTGGTGCTGGTTGGCCTCATCCGCAGCTCCAAGG...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000403167.5
CDS-3UTR TCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAAAGTCCACCAGGGCGGTaGGGTGCTGCAGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMESPPGR*GAAGSP
Trigger: AGGTGAACCTGCAGCACCTCACCGCCCTGGTGGACT...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGAGCAGCGTTCAGGTGTaGCCCGAGTTGGCGGTACGG +
Preference number: 4 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWSSVQV*PELAVR
Trigger: CCGTACCGCCAACTCGGGTCACACCTGAACGCTGCT...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGCCCCAGCCGTGCCTGTaGACTAAGAAGGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: APVGVARSWDGVVRNTAPPQPCL*TKKGST
Trigger: TGTGGACCCCTTCTTAGTTCACAGGCACGGCTGGGG...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAACAGAGGCCCCTCCACTaGGGTTTGGTCATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMEQRPLH*GLVMPG
Trigger: CCCAGGCATGACCAAACCTCAGTGGAGGGGCCTCTG...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGAGAATCCCACTGCGATaGCGGCGCTGCACACCAGCG +
Preference number: 4 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWRIPLR*RRCTPA
Trigger: CGCTGGTGTGCAGCGCCGGCATCGCAGTGGGATTCT...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR GCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGAGGGCGGTGAGGTGCTaGAGGTTCACCTCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWRAVRC*RFTSVP
Trigger: TGGCACGGAGGTGAACCTGCAGCACCTCACCGCCCT...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAAACCAGGGCGGTGAGGTaGTGCAGGTTCACCTCCGTG +
Preference number: 4 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMETRAVR*CRFTSV
Trigger: CACGGAGGTGAACCTGCAGCACCTCACCGCCCTGGT...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GCGAGGCTGGCTCGTGGCGAGGTATTTGGCTCTCATGCTGGAGGTGTACTGTCGTCAGGGCCTCTCTTTTaGTGCCAGGTGTGCGGGACG +
Preference number: 4 (lower is better)
Translates to: ARLARGEVFGSHAGGVLSSGPLF*CQVCGT
Trigger: CGTCCCGCACACCTGGCAGCAAAAGAGAGGCCCTGA...CGACAGTACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR GCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTGGTATTTGGCTCTCATaGTGGAGGTGTATGAGGGCG +
Preference number: 4 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSGIWLS*WRCMRA
Trigger: CGCCCTCATACACCTCCAGCATGAGAGCCAAATACC...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGGCCAGGGCTTGTAGGTaGGGCGACCATCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWARACR*GDHLQR
Trigger: CCTCTGCAGATGGTCGCCGCACCTACAAGCCCTGGC...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAACGAACCAGACACAGCTaGCCAGTCTCTGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMERTRHS*PVSGWG
Trigger: CCCCCACCCAGAGACTGGGCAGCTGTGTCTGGTTCG...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAACAGGCACCAGCCAGATaGCCCAGTAGGTGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMEQAPAR*PSRCGE
Trigger: CTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTG...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTACTCCTCCACCATTTTaGTCACGTAGGCGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSTPPPF*SRRRQG
Trigger: ACCCTGACGCCTACGTGACCAAAATGGTGGAGGAGT...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGAGTCAGGGCGAGGCTGGCTCGTGGCGAGGTATTTGGCTCTCATGCTGGAGGTCACAGCTGTACAGGCTaGGCATGTGGACGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: GVRARLARGEVFGSHAGGHSCTG*ACGRGR
Trigger: TCTACCGCGTCCACATGCCCAGCCTGTACAGCTGTG...ACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCCCTGACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR CCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTATTTGGCTCTCATGCTaGAGGTGTATGAGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: GRRPRPQGPQSKARGRFIIWLSC*RCMRAA
Trigger: CGCCGCCCTCATACACCTCCAGCATGAGAGCCAAAT...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGGGCGAGGCTGGCTCGTaGCGAGGTATTTGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: APVGVARSWDGVVRNTAPGEAGS*RGIWLS
Trigger: TGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCC...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp ACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGGAGTCTAGTGGCTGCCGCTaGAGTCAGGGCGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TLVSRKSQTGTHAHHGQESSGCR*SQGEAG
Trigger: GCCAGCCTCGCCCTGACTCCAGCGGCAGCCACTAGA...CTCCTGACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTGGGGAAGTTGGCACGTaGGGTGGGTGGCTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGGEVGT*GGWLPG
Trigger: GCCCGGCAGCCACCCACCCCACGTGCCAACTTCCCC...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACCGTGCGAGGGTCCGGTaGGTGGCCCAGGTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHRARVR*VAQVEA
Trigger: CGCTTCCACCTGGGCCACCCACCGGACCCTCGCACG...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTGGTGGCGTGCAGGGCTaGGGCATCGGCTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGGGVQG*GIGWQQ
Trigger: CTGCTGCCAGCCGATGCCCCAGCCCTGCACGCCACC...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGGCAGAGATGAGCAGGTaGCACGTGTCCCTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: APVGVARSWDGVVRNTAPAEMSR*HVSLSL
Trigger: GAGGGACAGGGACACGTGCCACCTGCTCATCTCTGC...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGTGGGGGAAGGGGGTTTaGCACCAAGAAGGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWWGKGV*HQEGGQ
Trigger: CTGGCCGCCTTCTTGGTGCCAAACCCCCTTCCCCCA...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAATGGGGGAAGGGGGTTTaGCACCAAGAAGGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMEWGKGV*HQEGGQ
Trigger: CTGGCCGCCTTCTTGGTGCCAAACCCCCTTCCCCCA...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAACGTCCGATCCTGATGTaGGGTGGCTCTGCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMERPILM*GGSALH
Trigger: GTGGAGGGCAGAGCCACCCCACATCAGGATCGGACG...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGCCTGGAGAACTCCCCTaGCGGGTCAAGCCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWPGELP*RVKPRG
Trigger: TCCTCTGGGCTTGACCCGCCAGGGGAGTTCTCCAGG...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp TCAGGTGTGACCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTGTCAAAAATACAACCAATaGCAGGCGCTCCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: SGVTRVGGTGPEPLRLHCQKYNQ*QALPST
Trigger: GGTGGAGGGGAGCGCCTGCCATTGGTTGTATTTTTG...ACAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTGGTGTGGCGAGGTCATaGGATGGAGTAGTTAGGAAC +
Preference number: 4 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSGVARS*DGVVRN
Trigger: GTTCCTAACTACTCCATCCCATGACCTCGCCACACC...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp TCAGGTGTGACCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTGTAATTGCATAGTGAGATaGGTGGGTGGGCAATGGGCC +
Preference number: 4 (lower is better)
Translates to: SGVTRVGGTGPEPLRLHCNCIVR*VGGQWA
Trigger: GGCCCATTGCCCACCCACCCATCTCACTATGCAATT...ACAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp TGGCTCGTGGCGAGGTATTTGGCTCTCATGCTGGAGGTGTACTGTCGCTCTGAGAACTGCCAGCCCGCGTaGCTGCCAGAGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: WLVARYLALMLEVYCRSENCQPA*LPESRA
Trigger: TGCCCTGGACTCTGGCAGCCACGCGGGCTGGCAGTT...CTCAGAGCGACAGTACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429448.1
3UTR CAA 72 bp CTGGAGTCAGGGCGAGGCTGGCTCGTGGCGAGGTATTaGGCTCTCATGCTGGAGGTGTACTGTCGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LESGRGWLVARY*ALMLEVYCRSE
Trigger: CTCAGAGCGACAGTACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCCCTGACTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR TCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAAACGCTACTGCAGCCTTaGCTCCCAGACAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMETLLQP*LPDSCS
Trigger: GGAGCAGCTGTCTGGGAGTCAAGGCTGCAGTAGCGT...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGCCCTGGAGCACCCCATaGAGAAACGCTACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWPWSTP*RNATAA
Trigger: GGCTGCAGTAGCGTTTCTTCATGGGGTGCTCCAGGG...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACTGCAGGGCCCAGCCTTaGCCCCTGCACGTGGCCATC +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHCRAQP*PLHVAI
Trigger: GATGGCCACGTGCAGGGGTCAAGGCTGGGCCCTGCA...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGCAGCATTTGTGCTTCTaGGCGGTCGCAGGGCGTTTG +
Preference number: 4 (lower is better)
Translates to: APVGVARSWDGVVRNTAPQHLCF*AVAGRL
Trigger: CAAACGCCCTGCGACCGCTCAGAAGCACAAATGCTG...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGGCAGGTTCACCTCCGTaGCATTCAGCACCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: APVGVARSWDGVVRNTAPAGSPP*HSAPPG
Trigger: TCCAGGAGGTGCTGAATGGCACGGAGGTGAACCTGC...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp ACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGGAGACCAGGGCGGTGAGGTaGTGCAGGTTCACCTCCGTG +
Preference number: 4 (lower is better)
Translates to: TLVSRKSQTGTHAHHGQETRAVR*CRFTSV
Trigger: CACGGAGGTGAACCTGCAGCACCTCACCGCCCTGGT...CTCCTGACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGTCTCACTGCCGTAGCTaGTGCCACAGCTGTACAGGC +
Preference number: 4 (lower is better)
Translates to: APVGVARSWDGVVRNTAPSHCRS*CHSCTG
Trigger: GCCTGTACAGCTGTGGCAGCAGCTACGGCAGTGAGA...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp GTCAGGGCGAGGCTGGCTCGTGGCGAGGTATTTGGCTCTCATGCTGGAGGTGTATCTCACTGCCGTAGCTaGTGCCACAGCTGTACAGGC +
Preference number: 4 (lower is better)
Translates to: VRARLARGEVFGSHAGGVSHCRS*CHSCTG
Trigger: GCCTGTACAGCTGTGGCAGCAGCTACGGCAGTGAGA...TACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCCCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR GCA 90 bp GGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACATGAAGAAACGCTACTaGAGCCTTGACTCCCAGACA +
Preference number: 4 (lower is better)
Translates to: GLGHRLAAAFRCDPSWRYMKKRY*SLDSQT
Trigger: TGTCTGGGAGTCAAGGCTGCAGTAGCGTTTCTTCAT...GTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGCAGGTAGCTGCCGGCTaGTCTGGGAGGAAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWQVAAG*SGRKSH
Trigger: ATGGCTCTTCCTCCCAGAGCAGCCGGCAGCTACCTG...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTTATGGATGCCATCACTaGTCTCCCCGTTGCCGTAGA +
Preference number: 4 (lower is better)
Translates to: GRRPRPQGPQSKARGRFIYGCHH*SPRCRR
Trigger: TCTACGGCAACGGGGAGACCAGTGATGGCATCCATA...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTACTCCTCCACCATTTTaGTCACGTAGGCGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: GRRPRPQGPQSKARGRFITPPPF*SRRRQG
Trigger: ACCCTGACGCCTACGTGACCAAAATGGTGGAGGAGT...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGACTCCTCCACCATTTTaGTCACGTAGGCGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: LASPPLTLCPFTWQAASRTPPPF*SRRRQG
Trigger: ACCCTGACGCCTACGTGACCAAAATGGTGGAGGAGT...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCCCGACAGCTTCTGCTaGAAGGGGTTGGCGGCGCGG +
Preference number: 4 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGPDSFC*KGLAAR
Trigger: CCGCGCCGCCAACCCCTTCCAGCAGAAGCTGTCGGG...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCCGCGGCCGGGATGCTaGTCTCACTGCCGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGPRPGC*SHCRSC
Trigger: GCAGCTACGGCAGTGAGACCAGCATCCCGGCCGCGG...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGTCGTGGCGAGGTATTTaGCTCTCATGCTGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: LASPPLTLCPFTWQAASRSWRGI*LSCWRC
Trigger: ACACCTCCAGCATGAGAGCCAAATACCTCGCCACGA...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAAGAGTCAGGGCGAGGCTaGCTCGTGGCGAGGTATTTG +
Preference number: 4 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMEESGRG*LVARYL
Trigger: CAAATACCTCGCCACGAGCCAGCCTCGCCCTGACTC...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTGAGGAAGGAGAGCTGTaGAGGGAAGGGCCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGEEGEL*REGPGG
Trigger: GCCGCCCGGCCCTTCCCTCCACAGCTCTCCTTCCTC...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACCTGCCTGTCGGTCTGTaGCACCCCCTGGAGCACCCC +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHLPVGL*HPLEHP
Trigger: GGGGTGCTCCAGGGGGTGCCACAGACCGACAGGCAG...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp ACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGGAGCTCGCTCCCACTTCATaGGGAGGAGACCGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: TLVSRKSQTGTHAHHGQELAPTS*GGDRGH
Trigger: GTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAG...CTCCTGACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACGCGTCTGTAAACTGCTaGGGCTGGCGGCCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHASVNC*GWRPAP
Trigger: TGGGGCGGGCCGCCAGCCCCAGCAGTTTACAGACGC...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp ACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGGAGCCTGGAGAACTCCCCTaGCGGGTCAAGCCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: TLVSRKSQTGTHAHHGQEPGELP*RVKPRG
Trigger: TCCTCTGGGCTTGACCCGCCAGGGGAGTTCTCCAGG...CTCCTGACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACCGAGGCTGGAAGCCCTaGCCTCACCGCCTCTCACGC +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHRGWKP*PHRLSR
Trigger: GCGTGAGAGGCGGTGAGGCCAGGGCTTCCAGCCTCG...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGGATGTTAAATCACACTaGGGTGGGGGAGGTCAGATG +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLDVKSH*GGGGQM
Trigger: CATCTGACCTCCCCCACCCCAGTGTGATTTAACATC...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTGATGTTAAATCACACTaGGGTGGGGGAGGTCAGATG +
Preference number: 4 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSDVKSH*GGGGQM
Trigger: CATCTGACCTCCCCCACCCCAGTGTGATTTAACATC...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACTCAGGCCTCAGTTCCTaGATGTTAAATCACACTGGG +
Preference number: 4 (lower is better)
Translates to: GLGHRLAAAFRCDPSWRYSGLSS*MLNHTG
Trigger: CCCAGTGTGATTTAACATCCAGGAACTGAGGCCTGA...GTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTGGGGGAAATGCAAAATaGTTCAGGCCTCAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSGGNAK*FRPQFL
Trigger: CAGGAACTGAGGCCTGAACCATTTTGCATTTCCCCC...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACGCCCCAGGGAGGGGATaGGGACATTTCCGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHAPGRG*GHFRSR
Trigger: CCTGGACCGGAAATGTCCTCATCCCCTCCCTGGGGC...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGGCAGGTTCACCTCCGTaGCATTCAGCACCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWAGSPP*HSAPPG
Trigger: TCCAGGAGGTGCTGAATGGCACGGAGGTGAACCTGC...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACAGTCCAGATGCAGGCTaGGGCAGTCCACCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHSPDAG*GSPPGR
Trigger: CCGCCCTGGTGGACTGCCGCAGCCTGCATCTGGACT...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAATCTCACTGCCGTAGCTaGTGCCACAGCTGTACAGGC +
Preference number: 4 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMESHCRS*CHSCTG
Trigger: GCCTGTACAGCTGTGGCAGCAGCTACGGCAGTGAGA...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAACCCGCAGCCCCAGCCTaGCCTAGAGATGACAAATGT +
Preference number: 4 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMEPAAPA*PRDDKC
Trigger: ACATTTGTCATCTCTAGGGCAGGCTGGGGCTGCGGG...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACTCCAGGCCCTTGGGCTaGCTGTCGGTCTGTGGCACC +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHSRPLG*LSVCGT
Trigger: GGTGCCACAGACCGACAGGCAGCCCAAGGGCCTGGA...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACGATGTGGGGTGGCTCTaGCCTCCACGGCGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHDVGWL*PPRREA
Trigger: TGCTTCCCGCCGTGGAGGGCAGAGCCACCCCACATC...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCCCAGCCTTGACCCCTaGACGTGGCCATCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGPSLDP*TWPSSC
Trigger: GCAGCTGGATGGCCACGTGCAGGGGTCAAGGCTGGG...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCATGCGTCTGTAAACTaGTGGGGCTGGCGGCCCGCC +
Preference number: 4 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGHASVN*WGWRPA
Trigger: GGCGGGCCGCCAGCCCCAGCAGTTTACAGACGCATG...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGACTGAGGTTTGGTCATaGCTGGGGAGCTCAGACGCC +
Preference number: 4 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWTEVWS*LGSSDA
Trigger: GGCGTCTGAGCTCCCCAGGCATGACCAAACCTCAGT...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp ACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGGAGGGGGTAGTGGATGCCTaGTGGGGAGCACTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: TLVSRKSQTGTHAHHGQEGVVDA*WGALSV
Trigger: CACTGAGAGTGCTCCCCAGCAGGCATCCACTACCCC...CTCCTGACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGGCTTGGAACTCGAATTaGATAGTGAGATGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLAWNSN*IVRWVG
Trigger: ACCCACCCATCTCACTATGCAATTCGAGTTCCAAGC...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp ACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGGAGCCACACAGAAGTCGCTaGAGCCCACGGACACAGCCA +
Preference number: 4 (lower is better)
Translates to: TLVSRKSQTGTHAHHGQEPHRSR*SPRTQP
Trigger: TGGCTGTGTCCGTGGGCTCCAGCGACTTCTGTGTGG...CTCCTGACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp ACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGGAGTCCACCAGTGCCTTGTaGCTGCCCGACAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: TLVSRKSQTGTHAHHGQESTSAL*LPDSFC
Trigger: GCAGAAGCTGTCGGGCAGCCACAAGGCACTGGTGGA...CTCCTGACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTAGGTGTGACCCGAGTTaGCGGTACGGGCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGRCDPS*RYGPRA
Trigger: GGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCT...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTGGCTGGGGCATCGGCTaGCAGCAGCGTTCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGGWGIG*QQRSGV
Trigger: CACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCC...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp ACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGGAGCTCAGGCCGGGCTCCTaGGATGCTGTACCTGTCATG +
Preference number: 4 (lower is better)
Translates to: TLVSRKSQTGTHAHHGQELRPGS*DAVPVM
Trigger: CATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAG...CTCCTGACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGAGCCAAAAGCACCATTaGGGAGCCTCGCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: APVGVARSWDGVVRNTAPSQKHH*GASLPL
Trigger: AAGTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCT...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGCATATTCCCCCTTTTTaGTCCCAGACACCAGCACAA +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLHIPPF*SQTPAQ
Trigger: TTGTGCTGGTGTCTGGGACCAAAAAGGGGGAATATG...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTGGTGAGAGTGGGGGCTaGCCATGGCAGCAGGCACCA +
Preference number: 4 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGGESGG*PWQQAP
Trigger: TGGTGCCTGCTGCCATGGCCAGCCCCCACTCTCACC...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACCTCCCAACGAGGCTGTaGGCCTGGGGGCTGCAAGAC +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHLPTRL*AWGLQD
Trigger: GTCTTGCAGCCCCCAGGCCCACAGCCTCGTTGGGAG...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAAGTAGTGGATGCCTGCTaGGGAGCACTCTCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMEVVDAC*GALSVR
Trigger: CCTCACTGAGAGTGCTCCCCAGCAGGCATCCACTAC...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACTGGGTGGGTGGGCAATaGGCCAGGGGCTGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHWVGGQ*ARGCSQ
Trigger: TTGGGAGCAGCCCCTGGCCCATTGCCCACCCACCCA...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTAGCAGCGTTCAGGTGTaGCCCGAGTTGGCGGTACGG +
Preference number: 4 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGSSVQV*PELAVR
Trigger: CCGTACCGCCAACTCGGGTCACACCTGAACGCTGCT...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp ACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGGAGCAGCATTTGTGCTTCTaGGCGGTCGCAGGGCGTTTG +
Preference number: 4 (lower is better)
Translates to: TLVSRKSQTGTHAHHGQEQHLCF*AVAGRL
Trigger: CAAACGCCCTGCGACCGCTCAGAAGCACAAATGCTG...CTCCTGACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGTCAGCCACGACATCCTaGATCTCCACCAGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWSATTS*ISTSAL
Trigger: CAAGGCACTGGTGGAGATGCAGGATGTCGTGGCTGA...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp ACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGGAGGCAGGTTCACCTCCGTaGCATTCAGCACCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: TLVSRKSQTGTHAHHGQEAGSPP*HSAPPG
Trigger: TCCAGGAGGTGCTGAATGGCACGGAGGTGAACCTGC...CTCCTGACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTGGGCCTCTCTTTTGCTaGCAGGTGTGCGGGACGCTG +
Preference number: 4 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGGPLFC*QVCGTL
Trigger: CAGCGTCCCGCACACCTGGCAGCAAAAGAGAGGCCC...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTTCTGCAGAGGGAGCGTaGCGGGATAGTGGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGSAEGA*RDSGWR
Trigger: ACGCCACCCACTATCCCGGCACGCTCCCTCTGCAGA...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACCGAACCAGACACAGCTaGCCAGTCTCTGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHRTRHS*PVSGWG
Trigger: CCCCCACCCAGAGACTGGGCAGCTGTGTCTGGTTCG...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGGCTTGGAACTCGAATTaGATAGTGAGATGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: LASPPLTLCPFTWQAASRAWNSN*IVRWVG
Trigger: ACCCACCCATCTCACTATGCAATTCGAGTTCCAAGC...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp TCGTGGCGAGGTATTTGGCTCTCATGCTGGAGGTGTACTGTCGCTCTGAGGGAATCCATGGGCTTAAACTaGCAGCCCGCGTGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SWRGIWLSCWRCTVALRESMGLN*QPAWLP
Trigger: TGGCAGCCACGCGGGCTGGCAGTTTAAGCCCATGGA...TTCCCTCAGAGCGACAGTACACCTCCAGCATGAGAGCCAAATACCTCGCCACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR CCA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGTGGAAATTAGCGTTCTaGCTCATGTACTCAGTGACC +
Preference number: 4 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLWKLAF*LMYSVT
Trigger: GGTCACTGAGTACATGAGCCAGAACGCTAATTTCCA...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp TCAGGTGTGACCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTGTTGGAAATTAGCGTTCTaGCTCATGTACTCAGTGACC +
Preference number: 4 (lower is better)
Translates to: SGVTRVGGTGPEPLRLHCWKLAF*LMYSVT
Trigger: GGTCACTGAGTACATGAGCCAGAACGCTAATTTCCA...ACAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GCGAGGCTGGCTCGTGGCGAGGTATTTGGCTCTCATGCTGGAGGTGTACTGTCGTCACAGCGGGGGTTCTaGAAATTAGCGTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: ARLARGEVFGSHAGGVLSSQRGF*KLAFWL
Trigger: GAGCCAGAACGCTAATTTCCAGAACCCCCGCTGTGA...CGACAGTACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR CCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCTCGCGCCCAATGAGTaGGGTGTTCTCACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGLAPNE*GVLTAG
Trigger: CCCCGCTGTGAGAACACCCCACTCATTGGGCGCGAG...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CGAGGCTGGCTCGTGGCGAGGTATTTGGCTCTCATGCTGGAGGTGTACTGTCGCTCGTGGCGAGGTATTTaGCTCTCATGCTGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: RGWLVARYLALMLEVYCRSWRGI*LSCWRC
Trigger: ACACCTCCAGCATGAGAGCCAAATACCTCGCCACGA...GCGACAGTACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR CCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTGGCACTGCAGAGAGATaGGCACGTGGAGGGACCACG +
Preference number: 4 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGGTAER*ARGGTT
Trigger: CGTGGTCCCTCCACGTGCCCATCTCTCTGCAGTGCC...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACCAGCTGCCCAGTCTCTaGGTGGGGGAAGGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHQLPSL*VGEGGL
Trigger: CAAACCCCCTTCCCCCACCCAGAGACTGGGCAGCTG...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTTGTCATGGATGGAAATaGAACCAAGAAGGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSCHGWK*NQEGRE
Trigger: TTCCCTCCCTTCTTGGTTCCATTTCCATCCATGACA...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp TCAGGTGTGACCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTGTTGTACCTGTCATGGATaGAAATGGAACCAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: SGVTRVGGTGPEPLRLHCCTCHG*KWNQEG
Trigger: CCCTTCTTGGTTCCATTTCCATCCATGACAGGTACA...ACAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTTGTACCTGTCATGGATaGAAATGGAACCAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSCTCHG*KWNQEG
Trigger: CCCTTCTTGGTTCCATTTCCATCCATGACAGGTACA...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACCTCGCTCCCACTTCATaGGGAGGAGACCGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHLAPTS*GGDRGH
Trigger: GTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAG...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACAGGTTTGGTCATGCCTaGGGAGCTCAGACGCCCCGG +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHRFGHA*GAQTPR
Trigger: CCGGGGCGTCTGAGCTCCCCAGGCATGACCAAACCT...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGGGTGTGGCGAGGTCATaGGATGGAGTAGTTAGGAAC +
Preference number: 4 (lower is better)
Translates to: APVGVARSWDGVVRNTAPGVARS*DGVVRN
Trigger: GTTCCTAACTACTCCATCCCATGACCTCGCCACACC...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACGGAGCAAATGTTGCTTaGAACTCGAATTGCATAGTG +
Preference number: 4 (lower is better)
Translates to: GLGHRLAAAFRCDPSWRYGANVA*NSNCIV
Trigger: CACTATGCAATTCGAGTTCCAAGCAACATTTGCTCC...GTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTTCAGGCCTCAGTTCCTaGATGTTAAATCACACTGGG +
Preference number: 4 (lower is better)
Translates to: GRRPRPQGPQSKARGRFISGLSS*MLNHTG
Trigger: CCCAGTGTGATTTAACATCCAGGAACTGAGGCCTGA...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAACAGTACATACAGCCATaGCCCTACAGAGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMEQYIQP*PYRGWR
Trigger: CCTCCAGCCTCTGTAGGGCCATGGCTGTATGTACTG...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACACGCTACTGCAGCCTTaGCTCCCAGACAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHTLLQP*LPDSCS
Trigger: GGAGCAGCTGTCTGGGAGTCAAGGCTGCAGTAGCGT...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACCTGCATCTCCACCAGTaGCTTGTGGCTGCCCGACAG +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHLHLHQ*LVAARQ
Trigger: CTGTCGGGCAGCCACAAGGCACTGGTGGAGATGCAG...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTTCAGGGCCTCTCTTTTaGTGCCAGGTGTGCGGGACG +
Preference number: 4 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGSGPLF*CQVCGT
Trigger: CGTCCCGCACACCTGGCAGCAAAAGAGAGGCCCTGA...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCACTGCCGTAGCTGCTaGCACAGCTGTACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGHCRSC*HSCTGW
Trigger: CCAGCCTGTACAGCTGTGGCAGCAGCTACGGCAGTG...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAAGGTATTTGGCTCTCATaGTGGAGGTGTATGAGGGCG +
Preference number: 4 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMEGIWLS*WRCMRA
Trigger: CGCCCTCATACACCTCCAGCATGAGAGCCAAATACC...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTGCCGGGCTCCTGGGATaGTGTACCTGTCATGGATGG +
Preference number: 4 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGAGLLG*CTCHGW
Trigger: CCATCCATGACAGGTACAGCATCCCAGGAGCCCGGC...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp ACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGGAGATTTGGCTCTCATGCTaGAGGTGTATGAGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: TLVSRKSQTGTHAHHGQEIWLSC*RCMRAA
Trigger: CGCCGCCCTCATACACCTCCAGCATGAGAGCCAAAT...CTCCTGACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAATCGTGGCGAGGTATTTaGCTCTCATGCTGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMESWRGI*LSCWRC
Trigger: ACACCTCCAGCATGAGAGCCAAATACCTCGCCACGA...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAACAAAAATACAACCAATaGCAGGCGCTCCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMEQKYNQ*QALPST
Trigger: GGTGGAGGGGAGCGCCTGCCATTGGTTGTATTTTTG...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GTCAGGGCGAGGCTGGCTCGTGGCGAGGTATTTGGCTCTCATGCTGGAGGTGTAATTTGGCTCTCATGCTaGAGGTGTACTGTCGCTCTG +
Preference number: 4 (lower is better)
Translates to: VRARLARGEVFGSHAGGVIWLSC*RCTVAL
Trigger: CAGAGCGACAGTACACCTCCAGCATGAGAGCCAAAT...TACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCCCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR GCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACAGGTGGCCCTATGGATaGCATCACTGGTCTCCCCGT +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHRWPYG*HHWSPR
Trigger: ACGGGGAGACCAGTGATGGCATCCATAGGGCCACCT...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR GCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTTTTTGCTGCCAGGTGTaGGGGACGCTGCAGACGATG +
Preference number: 4 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGFCCQV*GTLQTM
Trigger: CATCGTCTGCAGCGTCCCGCACACCTGGCAGCAAAA...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACACTGAGGTTTGGTCATaGCTGGGGAGCTCAGACGCC +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHTEVWS*LGSSDA
Trigger: GGCGTCTGAGCTCCCCAGGCATGACCAAACCTCAGT...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTGGCAACAACACAGGTTaGGTGCGGCCAGGGCTTGTA +
Preference number: 4 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGGNNTG*VRPGLV
Trigger: TACAAGCCCTGGCCGCACCCAACCTGTGTTGTTGCC...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACCCCTCCACTGAGGTTTaGTCATGCCTGGGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHPSTEV*SCLGSS
Trigger: TGAGCTCCCCAGGCATGACCAAACCTCAGTGGAGGG...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACCTATGTCCATTCACCTaGCAGGCAGCCTCACGGCCA +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHLCPFT*QAASRP
Trigger: TGGCCGTGAGGCTGCCTGCCAGGTGAATGGACATAG...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACGTAGTGGATGCCTGCTaGGGAGCACTCTCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHVVDAC*GALSVR
Trigger: CCTCACTGAGAGTGCTCCCCAGCAGGCATCCACTAC...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTGGAGCAAATGTTGCTTaGAACTCGAATTGCATAGTG +
Preference number: 4 (lower is better)
Translates to: GRRPRPQGPQSKARGRFIGANVA*NSNCIV
Trigger: CACTATGCAATTCGAGTTCCAAGCAACATTTGCTCC...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGGATGTTAAATCACACTaGGGTGGGGGAGGTCAGATG +
Preference number: 4 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWDVKSH*GGGGQM
Trigger: CATCTGACCTCCCCCACCCCAGTGTGATTTAACATC...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp ACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGGAGACTGGTGTCAGTTCTTaGGAAAGGCTCCCATTAGGG +
Preference number: 4 (lower is better)
Translates to: TLVSRKSQTGTHAHHGQETGVSS*ERLPLG
Trigger: CCCTAATGGGAGCCTTTCTCAAGAACTGACACCAGT...CTCCTGACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403167.5
CDS-3UTR GCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTTCAGCCACGACATCCTaGATCTCCACCAGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGSATTS*ISTSAL
Trigger: CAAGGCACTGGTGGAGATGCAGGATGTCGTGGCTGA...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR GCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACTGGGAGGAAGAGCCATaGGTCTGTAAACTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHWEEEP*VCKLLG
Trigger: CCCCAGCAGTTTACAGACGCATGGCTCTTCCTCCCA...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CGAGGCTGGCTCGTGGCGAGGTATTTGGCTCTCATGCTGGAGGTGTACTGTCGCTGGAAATTAGCGTTCTaGCTCATGTACTCAGTGACC +
Preference number: 4 (lower is better)
Translates to: RGWLVARYLALMLEVYCRWKLAF*LMYSVT
Trigger: GGTCACTGAGTACATGAGCCAGAACGCTAATTTCCA...GCGACAGTACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR TCA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGTTTCTTCAACCTTGGTaGGTAGAAAGTCACAGACGG +
Preference number: 4 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWFLQPW*VESHRR
Trigger: CCGTCTGTGACTTTCTACTCACCAAGGTTGAAGAAA...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACTCACAGCGGGGGTTCTaGAAATTAGCGTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHSQRGF*KLAFWL
Trigger: GAGCCAGAACGCTAATTTCCAGAACCCCCGCTGTGA...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTTCACAGCGGGGGTTCTaGAAATTAGCGTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGSQRGF*KLAFWL
Trigger: GAGCCAGAACGCTAATTTCCAGAACCCCCGCTGTGA...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACTCGTGGCGAGGTATTTaGCTCTCATGCTGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHSWRGI*LSCWRC
Trigger: ACACCTCCAGCATGAGAGCCAAATACCTCGCCACGA...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACCAAAAATACAACCAATaGCAGGCGCTCCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHQKYNQ*QALPST
Trigger: GGTGGAGGGGAGCGCCTGCCATTGGTTGTATTTTTG...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR TCA 90 bp ACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGGAGTTTCTTCAACCTTGGTaGGTAGAAAGTCACAGACGG +
Preference number: 4 (lower is better)
Translates to: TLVSRKSQTGTHAHHGQEFLQPW*VESHRR
Trigger: CCGTCTGTGACTTTCTACTCACCAAGGTTGAAGAAA...CTCCTGACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACGGGGGAAATGCAAAATaGTTCAGGCCTCAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHGGNAK*FRPQFL
Trigger: CAGGAACTGAGGCCTGAACCATTTTGCATTTCCCCC...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCTGGGTCATGGGGACTaGTGTCAGTTCTTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGLGHGD*CQFLRK
Trigger: CTTTCTCAAGAACTGACACCAGTCCCCATGACCCAG...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403167.5
CDS-3UTR TCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACTTTCTTCAACCTTGGTaGGTAGAAAGTCACAGACGG +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHFLQPW*VESHRR
Trigger: CCGTCTGTGACTTTCTACTCACCAAGGTTGAAGAAA...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACTGGAAATTAGCGTTCTaGCTCATGTACTCAGTGACC +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHWKLAF*LMYSVT
Trigger: GGTCACTGAGTACATGAGCCAGAACGCTAATTTCCA...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACTGTCATGGATGGAAATaGAACCAAGAAGGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHCHGWK*NQEGRE
Trigger: TTCCCTCCCTTCTTGGTTCCATTTCCATCCATGACA...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CCA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACGGAGCAAATGTTGCTTaGAACTCGAATTGCATAGTG +
Preference number: 4 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHGANVA*NSNCIV
Trigger: CACTATGCAATTCGAGTTCCAAGCAACATTTGCTCC...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGGCGGTCGCAGGGCGTTaGGCGGGCACCCACGCCAGG +
Preference number: 5 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWAVAGR*AGTHAR
Trigger: CCTGGCGTGGGTGCCCGCCAAACGCCCTGCGACCGC...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS GCA 90 bp TGCAGCCTCTGTACGGCTCGCAGGGGCTCGGGCCGCCCGGCCAGCTaGCGCTCCAGGGTCTGCAGGCTGGGCTCCGCCGTGTGGTTCAGC +
Preference number: 5 (lower is better)
Translates to: CSLCTARRGSGRPAS*RSRVCRLGSAVWFS
Trigger: GCTGAACCACACGGCGGAGCCCAGCCTGCAGACCCTGGAGCGGCAGCTGGCCGGGCGGCCCGAGCCCCTGCGAGCCGTACAGAGGCTGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR CAA 90 bp CGTCTGGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTGGGTGGCCCAGGTGGCTGGGCTCCTCCCTCTaGTCCCCAGGGCCACCCTGT +
Preference number: 5 (lower is better)
Translates to: RLGQAWHGVRGSGGWPRWLGSSL*SPGPPC
Trigger: ACAGGGTGGCCCTGGGGACAAGAGGGAGGAGCCCAG...CCACCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGTTCTGCTGGAAGGGGTaGGCGGCGCGGGGCGAGCAG +
Preference number: 5 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWFCWKG*AARGEQ
Trigger: CTGCTCGCCCCGCGCCGCCAACCCCTTCCAGCAGAA...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp TGGGTGGCTGCCGGGCGCGGTCTAGTGGCTGCCGCTGGAGTCAGGGCGAGGCTGTCAGTGACCGGGGCGTaGCTGACGGTGTGGGCCGCG +
Preference number: 5 (lower is better)
Translates to: WVAAGRGLVAAAGVRARLSVTGA*LTVWAA
Trigger: CGCGGCCCACACCGTCAGCAACGCCCCGGTCACTGA...CAGCCTCGCCCTGACTCCAGCGGCAGCCACTAGACCGCGCCCGGCAGCCACCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS GCA 90 bp GCCCCACCGCCGTGTCCCACACGCGGTCCTGGACCCCGGCCACCGTaGGGTTGGCGTGGCGGAGCGAGTAGGTGGCCCTATGGATGCCAT +
Preference number: 5 (lower is better)
Translates to: APPPCPTRGPGPRPP*GWRGGASRWPYGCH
Trigger: ATGGCATCCATAGGGCCACCTACTCGCTCCGCCACGCCAACCGCACGGTGGCCGGGGTCCAGGACCGCGTGTGGGACACGGCGGTGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS CCA 90 bp CCGCCGTGTCCCACACGCGGTCCTGGACCCCGGCCACCGTGCGGTTaGCGTGGCGGAGCGAGTAGGTGGCCCTATGGATGCCATCACTGG +
Preference number: 5 (lower is better)
Translates to: PPCPTRGPGPRPPCG*RGGASRWPYGCHHW
Trigger: CCAGTGATGGCATCCATAGGGCCACCTACTCGCTCCGCCACGCCAACCGCACGGTGGCCGGGGTCCAGGACCGCGTGTGGGACACGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR CAA 90 bp CGTCTGGGGCAGGCCTGGCACGGCGTGCGAGGGTCCGGTGGGTGGCCCAGGTGGATCAGGGCCTCTCTTTaGCTGCCAGGTGTGCGGGAC +
Preference number: 5 (lower is better)
Translates to: RLGQAWHGVRGSGGWPRWIRASL*LPGVRD
Trigger: GTCCCGCACACCTGGCAGCAAAAGAGAGGCCCTGAT...CCACCTGGGCCACCCACCGGACCCTCGCACGCCGTGCCAGGCCTGCCCCAGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGGGGGTGTCCAGGCCCTaGGGCTGCCTGTCGGTCTGT +
Preference number: 5 (lower is better)
Translates to: ASAPARTWAHTAGSGPARGVSRP*GCLSVC
Trigger: ACAGACCGACAGGCAGCCCAAGGGCCTGGACACCCC...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
71% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGGCGGTCGCAGGGCGTTaGGCGGGCACCCACGCCAGG +
Preference number: 5 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLAVAGR*AGTHAR
Trigger: CCTGGCGTGGGTGCCCGCCAAACGCCCTGCGACCGC...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGCTGGGCTCCTCCCTCTaGTCCCCAGGGCCACCCTGT +
Preference number: 5 (lower is better)
Translates to: ASAPARTWAHTAGSGPARLGSSL*SPGPPC
Trigger: ACAGGGTGGCCCTGGGGACAAGAGGGAGGAGCCCAG...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS CCA 90 bp CCGCCAGCACCTCCAGCGACACCGCCGTGTTCCTCCAAAAGGGGATaGCGGCCGTGTAGCCCAGCAGCGTCTCCAGCAGGCCCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: PPAPPATPPCSSKRG*RPCSPAASPAGPAA
Trigger: GGCTGCAGGGCCTGCTGGAGACGCTGCTGGGCTACACGGCCGCCATCCCCTTTTGGAGGAACACGGCGGTGTCGCTGGAGGTGCTGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR CAA 90 bp GGGGTGGGTGGCTGCCGGGCGCGGTCTAGTGGCTGCCGCTGGAGTCAGGGCGAGGAAGCCGGTCAGCGCTaGCACGTAGTCCAGATGCAG +
Preference number: 5 (lower is better)
Translates to: GVGGCRARSSGCRWSQGEEAGQR*HVVQMQ
Trigger: CTGCATCTGGACTACGTGCAAGCGCTGACCGGCTTC...CTCGCCCTGACTCCAGCGGCAGCCACTAGACCGCGCCCGGCAGCCACCCACCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR CAA 90 bp GGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACTCAGTGACCGGGGCGTaGCTGACGGTGTGGGCCGCG +
Preference number: 5 (lower is better)
Translates to: GLGHRLAAAFRCDPSWRYSVTGA*LTVWAA
Trigger: CGCGGCCCACACCGTCAGCAACGCCCCGGTCACTGA...GTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp GTCGCAGGGCGTTTGGCGGGCACCCACGCCAGGGTGCCAGGGCCTCTCTCCTGGCGGCAACAACACAGGTaGGGTGCGGCCAGGGCTTGT +
Preference number: 5 (lower is better)
Translates to: VAGRLAGTHARVPGPLSWRQQHR*GAARAC
Trigger: ACAAGCCCTGGCCGCACCCAACCTGTGTTGTTGCCG...CCAGGAGAGAGGCCCTGGCACCCTGGCGTGGGTGCCCGCCAAACGCCCTGCGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp TCAGGTGTGACCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTGTAGGTGCTCCTCGCTCTaGCGCCGCCGGCAGCACAGC +
Preference number: 5 (lower is better)
Translates to: SGVTRVGGTGPEPLRLHCRCSSL*RRRQHS
Trigger: GCTGTGCTGCCGGCGGCGCAAGAGCGAGGAGCACCT...ACAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR CAA 90 bp TGGGTGGCTGCCGGGCGCGGTCTAGTGGCTGCCGCTGGAGTCAGGGCGAGGCTGATCAGGGCCTCTCTTTaGCTGCCAGGTGTGCGGGAC +
Preference number: 5 (lower is better)
Translates to: WVAAGRGLVAAAGVRARLIRASL*LPGVRD
Trigger: GTCCCGCACACCTGGCAGCAAAAGAGAGGCCCTGAT...CAGCCTCGCCCTGACTCCAGCGGCAGCCACTAGACCGCGCCCGGCAGCCACCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS-3UTR CAA 90 bp TCAGGTGTGACCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTGTTCAGTGACCGGGGCGTaGCTGACGGTGTGGGCCGCG +
Preference number: 5 (lower is better)
Translates to: SGVTRVGGTGPEPLRLHCSVTGA*LTVWAA
Trigger: CGCGGCCCACACCGTCAGCAACGCCCCGGTCACTGA...ACAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp GGGGTGGGTGGCTGCCGGGCGCGGTCTAGTGGCTGCCGCTGGAGTCAGGGCGAGCTCGTGGCGAGGTATTaGGCTCTCATGCTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: GVGGCRARSSGCRWSQGELVARY*ALMLEV
Trigger: CACCTCCAGCATGAGAGCCAAATACCTCGCCACGAG...CTCGCCCTGACTCCAGCGGCAGCCACTAGACCGCGCCCGGCAGCCACCCACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS GCA 90 bp CGGTGTGGGCCGCGGCCGGGATGCTGGTCTCACTGCCGTAGCTGCTaGCACAGCTGTACAGGCTGGGCATGTGGACGCGGTAGAGGCTGT +
Preference number: 5 (lower is better)
Translates to: RCGPRPGCWSHCRSC*HSCTGWACGRGRGC
Trigger: ACAGCCTCTACCGCGTCCACATGCCCAGCCTGTACAGCTGTGGCAGCAGCTACGGCAGTGAGACCAGCATCCCGGCCGCGGCCCACACCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
ENST00000429448.1
ENST00000498454.1
CDS CCA 90 bp GGATGCTGGTCTCACTGCCGTAGCTGCTGCCACAGCTGTACAGGCTaGGCATGTGGACGCGGTAGAGGCTGTCGTGCGCCTGCCGCGGCC +
Preference number: 5 (lower is better)
Translates to: GCWSHCRSCCHSCTG*ACGRGRGCRAPAAA
Trigger: GGCCGCGGCAGGCGCACGACAGCCTCTACCGCGTCCACATGCCCAGCCTGTACAGCTGTGGCAGCAGCTACGGCAGTGAGACCAGCATCC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
ENST00000429448.1
ENST00000498454.1
CDS-3UTR CAA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTAGGTGCTCCTCGCTCTaGCGCCGCCGGCAGCACAGC +
Preference number: 5 (lower is better)
Translates to: GRRPRPQGPQSKARGRFIRCSSL*RRRQHS
Trigger: GCTGTGCTGCCGGCGGCGCAAGAGCGAGGAGCACCT...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR CAA 90 bp GCCTCGGCTCCAGCCCGGACTTGGGCTCACACTGCCGGCTCTGGGCCAGCTAGGATCAGGGCCTCTCTTTaGCTGCCAGGTGTGCGGGAC +
Preference number: 5 (lower is better)
Translates to: ASAPARTWAHTAGSGPARIRASL*LPGVRD
Trigger: GTCCCGCACACCTGGCAGCAAAAGAGAGGCCCTGAT...CCTAGCTGGCCCAGAGCCGGCAGTGTGAGCCCAAGTCCGGGCTGGAGCCGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGATCAGTGACCGGGGCGTaGCTGACGGTGTGGGCCGCG +
Preference number: 5 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGSVTGA*LTVWAA
Trigger: CGCGGCCCACACCGTCAGCAACGCCCCGGTCACTGA...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGGGGGTGTCCAGGCCCTaGGGCTGCCTGTCGGTCTGT +
Preference number: 5 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLGVSRP*GCLSVC
Trigger: ACAGACCGACAGGCAGCCCAAGGGCCTGGACACCCC...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTTGGCTGCCCCTGGCCTaGGCACAGGCATCGAGCCTC +
Preference number: 5 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSWLPLA*AQASSL
Trigger: GAGGCTCGATGCCTGTGCCAAGGCCAGGGGCAGCCA...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp TCAGGTGTGACCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTGTGTGGGGGAAGGGGGTTaGGCACCAAGAAGGCGGCCA +
Preference number: 5 (lower is better)
Translates to: SGVTRVGGTGPEPLRLHCVGEGG*APRRRP
Trigger: TGGCCGCCTTCTTGGTGCCAAACCCCCTTCCCCCAC...ACAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTGTGGGGGAAGGGGGTTaGGCACCAAGAAGGCGGCCA +
Preference number: 5 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSVGEGG*APRRRP
Trigger: TGGCCGCCTTCTTGGTGCCAAACCCCCTTCCCCCAC...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGATGGCTGCCCCTGGCCTaGGCACAGGCATCGAGCCTC +
Preference number: 5 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGWLPLA*AQASSL
Trigger: GAGGCTCGATGCCTGTGCCAAGGCCAGGGGCAGCCA...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS GCA 90 bp GCCTGGTCTCTGGGTGGCCCCAGGCACTCGGAGACCTGGGCAGGTTaGTTCAGGTCCTGGGCTACAAGTGCCCCACGTGCAGACTCTTGC +
Preference number: 5 (lower is better)
Translates to: AWSLGGPRHSETWAG*FRSWATSAPRADSC
Trigger: GCAAGAGTCTGCACGTGGGGCACTTGTAGCCCAGGACCTGAAGCAACCTGCCCAGGTCTCCGAGTGCCTGGGGCCACCCAGAGACCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477439.1
CDS CCA 90 bp GGTTGGCGTGGCGGAGCGAGTAGGTGGCCCTATGGATGCCATCACTaGTCTCCCCGTTGCCGTAGAATCCCACTGCGATGCCGGCGCTGC +
Preference number: 5 (lower is better)
Translates to: GWRGGASRWPYGCHH*SPRCRRIPLRCRRC
Trigger: GCAGCGCCGGCATCGCAGTGGGATTCTACGGCAACGGGGAGACCAGTGATGGCATCCATAGGGCCACCTACTCGCTCCGCCACGCCAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR CAA 90 bp GGGCTGGGGCATCGGCTGGCAGCAGCGTTCAGGTGTGACCCGAGTTGGCGGTACGAAGCCGGTCAGCGCTaGCACGTAGTCCAGATGCAG +
Preference number: 5 (lower is better)
Translates to: GLGHRLAAAFRCDPSWRYEAGQR*HVVQMQ
Trigger: CTGCATCTGGACTACGTGCAAGCGCTGACCGGCTTC...GTACCGCCAACTCGGGTCACACCTGAACGCTGCTGCCAGCCGATGCCCCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTGGGGGAAGGGGGTTaGGCACCAAGAAGGCGGCCA +
Preference number: 5 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGVGEGG*APRRRP
Trigger: TGGCCGCCTTCTTGGTGCCAAACCCCCTTCCCCCAC...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS GCA 90 bp GGAGCGAGTAGGTGGCCCTATGGATGCCATCACTGGTCTCCCCGTTaGCGTAGAATCCCACTGCGATGCCGGCGCTGCACACCAGCGTGG +
Preference number: 5 (lower is better)
Translates to: GASRWPYGCHHWSPR*RRIPLRCRRCTPAW
Trigger: CCACGCTGGTGTGCAGCGCCGGCATCGCAGTGGGATTCTACGGCAACGGGGAGACCAGTGATGGCATCCATAGGGCCACCTACTCGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS-3UTR CAA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGCGGCAACAACACAGGTaGGGTGCGGCCAGGGCTTGT +
Preference number: 5 (lower is better)
Translates to: LASPPLTLCPFTWQAASRRQQHR*GAARAC
Trigger: ACAAGCCCTGGCCGCACCCAACCTGTGTTGTTGCCG...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS TCA 90 bp CTTGCACGTAGTCCAGATGCAGGCTGCGGCAGTCCACCAGGGCGGTaGGGTGCTGCAGGTTCACCTCCGTGCCATTCAGCACCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: LARSPDAGCGSPPGR*GAAGSPPCHSAPPG
Trigger: TCCAGGAGGTGCTGAATGGCACGGAGGTGAACCTGCAGCACCTCACCGCCCTGGTGGACTGCCGCAGCCTGCATCTGGACTACGTGCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
ENST00000429448.1
ENST00000498454.1
CDS GCA 90 bp GACGGTCCTCAGAAGCTCAGCCACGACATCCTGCATCTCCACCAGTaGCTTGTGGCTGCCCGACAGCTTCTGCTGGAAGGGGTTGGCGGC +
Preference number: 5 (lower is better)
Translates to: DGPQKLSHDILHLHQ*LVAARQLLLEGVGG
Trigger: GCCGCCAACCCCTTCCAGCAGAAGCTGTCGGGCAGCCACAAGGCACTGGTGGAGATGCAGGATGTCGTGGCTGAGCTTCTGAGGACCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS GCA 90 bp CCCACGTGCAGACTCTTGCAGGAAATCAAGGGCTGGGGGCAAGTGTaGTGGGATGCTGGCCACAGGGGCACAGGCCACAGGCACAGAAGG +
Preference number: 5 (lower is better)
Translates to: PTCRLLQEIKGWGQV*WDAGHRGTGHRHRR
Trigger: CCTTCTGTGCCTGTGGCCTGTGCCCCTGTGGCCAGCATCCCAGCACACTTGCCCCCAGCCCTTGATTTCCTGCAAGAGTCTGCACGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477439.1
CDS GCA 90 bp ACATCCTGCATCTCCACCAGTGCCTTGTGGCTGCCCGACAGCTTCTaGTCCAGAGAGGAGACCAAGTCCATGGGCGCTGCTGGGTCCGCC +
Preference number: 5 (lower is better)
Translates to: TSCISTSALWLPDSF*SREETKSMGAAGSA
Trigger: GGCGGACCCAGCAGCGCCCATGGACTTGGTCTCCTCTCTGGAGCAGAAGCTGTCGGGCAGCCACAAGGCACTGGTGGAGATGCAGGATGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498454.1
CDS-3UTR CAA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGCCCACCAGGATGCCCTaGGAGCTGCGGATGAGGCCA +
Preference number: 5 (lower is better)
Translates to: APVGVARSWDGVVRNTAPPTRMP*ELRMRP
Trigger: TGGCCTCATCCGCAGCTCCAAGGGCATCCTGGTGGG...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000403167.5
CDS-3UTR CAA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAATCTCCACCAGTGCCTaGTGGCTGCCCGACAGCTTC +
Preference number: 5 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGISTSA*WLPDSF
Trigger: GAAGCTGTCGGGCAGCCACAAGGCACTGGTGGAGAT...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTGAAGCCGGTCAGCGCTaGCACGTAGTCCAGATGCAG +
Preference number: 5 (lower is better)
Translates to: GRRPRPQGPQSKARGRFIEAGQR*HVVQMQ
Trigger: CTGCATCTGGACTACGTGCAAGCGCTGACCGGCTTC...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTATCAGGGCCTCTCTTTaGCTGCCAGGTGTGCGGGAC +
Preference number: 5 (lower is better)
Translates to: GRRPRPQGPQSKARGRFIIRASL*LPGVRD
Trigger: GTCCCGCACACCTGGCAGCAAAAGAGAGGCCCTGAT...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp TCAGGTGTGACCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTGTAACGCTACTGCAGCCTaGACTCCCAGACAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: SGVTRVGGTGPEPLRLHCNATAA*TPRQLL
Trigger: GAGCAGCTGTCTGGGAGTCAAGGCTGCAGTAGCGTT...ACAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTAACGCTACTGCAGCCTaGACTCCCAGACAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: GRRPRPQGPQSKARGRFINATAA*TPRQLL
Trigger: GAGCAGCTGTCTGGGAGTCAAGGCTGCAGTAGCGTT...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGAAGCCAAAAGCACCATaGGGGAGCCTCGCTCCCACT +
Preference number: 5 (lower is better)
Translates to: LASPPLTLCPFTWQAASRKPKAP*GSLAPT
Trigger: AGTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTT...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS GCA 90 bp GGTTGCTTCAGGTCCTGGGCTACAAGTGCCCCACGTGCAGACTCTTaGAGGAAATCAAGGGCTGGGGGCAAGTGTGCTGGGATGCTGGCC +
Preference number: 5 (lower is better)
Translates to: GCFRSWATSAPRADS*RKSRAGGKCAGMLA
Trigger: GGCCAGCATCCCAGCACACTTGCCCCCAGCCCTTGATTTCCTGCAAGAGTCTGCACGTGGGGCACTTGTAGCCCAGGACCTGAAGCAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477439.1
CDS GCA 90 bp GCACTCGGAGACCTGGGCAGGTTGCTTCAGGTCCTGGGCTACAAGTaGCCCACGTGCAGACTCTTGCAGGAAATCAAGGGCTGGGGGCAA +
Preference number: 5 (lower is better)
Translates to: ALGDLGRLLQVLGYK*PTCRLLQEIKGWGQ
Trigger: TTGCCCCCAGCCCTTGATTTCCTGCAAGAGTCTGCACGTGGGGCACTTGTAGCCCAGGACCTGAAGCAACCTGCCCAGGTCTCCGAGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477439.1
CDS-3UTR CAA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGCGGCAACAACACAGGTaGGGTGCGGCCAGGGCTTGT +
Preference number: 5 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWRQQHR*GAARAC
Trigger: ACAAGCCCTGGCCGCACCCAACCTGTGTTGTTGCCG...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTCCATATTCCCCCTTTTaGGTCCCAGACACCAGCACA +
Preference number: 5 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSPYSPF*VPDTST
Trigger: TGTGCTGGTGTCTGGGACCAAAAAGGGGGAATATGG...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS GCA 90 bp GACGGTCCTCAGAAGCTCAGCCACGACATCCTGCATCTCCACCAGTaGCTTGTGGCTGCCCGACAGCTTCTGCTCCAGAGAGGAGACCAA +
Preference number: 5 (lower is better)
Translates to: DGPQKLSHDILHLHQ*LVAARQLLLQRGDQ
Trigger: TTGGTCTCCTCTCTGGAGCAGAAGCTGTCGGGCAGCCACAAGGCACTGGTGGAGATGCAGGATGTCGTGGCTGAGCTTCTGAGGACCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498454.1
CDS-3UTR CAA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGGAAGCCGGTCAGCGCTaGCACGTAGTCCAGATGCAG +
Preference number: 5 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWEAGQR*HVVQMQ
Trigger: CTGCATCTGGACTACGTGCAAGCGCTGACCGGCTTC...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGCTCGTGGCGAGGTATTaGGCTCTCATGCTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: APVGVARSWDGVVRNTAPLVARY*ALMLEV
Trigger: CACCTCCAGCATGAGAGCCAAATACCTCGCCACGAG...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp AGCCCCTCAGGCCGGGCTCCTGGGATGCTGTACCTGTCATGGATGGAAATGGAAGGGCACCCGTGGAGTTaGGGGGTGAGGTTAGTGGTT +
Preference number: 5 (lower is better)
Translates to: SPSGRAPGMLYLSWMEMEGHPWS*GVRLVV
Trigger: AACCACTAACCTCACCCCCAAACTCCACGGGTGCCC...TTCCATTTCCATCCATGACAGGTACAGCATCCCAGGAGCCCGGCCTGAGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGAAGCCAAAAGCACCATaGGGGAGCCTCGCTCCCACT +
Preference number: 5 (lower is better)
Translates to: APVGVARSWDGVVRNTAPKPKAP*GSLAPT
Trigger: AGTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTT...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCTGGGCTCCTCCCTCTaGTCCCCAGGGCCACCCTGT +
Preference number: 5 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGLGSSL*SPGPPC
Trigger: ACAGGGTGGCCCTGGGGACAAGAGGGAGGAGCCCAG...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp GGGAGCCTCGCTCCCACTTCATGGGGAGGAGACCGAGGCCACAGGGACCTCAGTTGCTTGGAACTCGAATaGCATAGTGAGATGGGTGGG +
Preference number: 5 (lower is better)
Translates to: GSLAPTSWGGDRGHRDLSCLELE*HSEMGG
Trigger: CCCACCCATCTCACTATGCAATTCGAGTTCCAAGCA...ACTGAGGTCCCTGTGGCCTCGGTCTCCTCCCCATGAAGTGGGAGCGAGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGGGGCAGGAGCAAATGTaGCTTGGAACTCGAATTGCA +
Preference number: 5 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLGQEQM*LGTRIA
Trigger: TGCAATTCGAGTTCCAAGCAACATTTGCTCCTGCCC...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGGACTGGTGTCAGTTCTaGAGAAAGGCTCCCATTAGG +
Preference number: 5 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLDWCQF*RKAPIR
Trigger: CCTAATGGGAGCCTTTCTCAAGAACTGACACCAGTC...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403167.5
CDS CCA 90 bp ACTGCAGGATGTCCCCACTCAGCACCGAGTACTCCTCCACCATTTTaGTCACGTAGGCGTCAGGGTCCACACAGAAGTCGCTGGAGCCCA +
Preference number: 5 (lower is better)
Translates to: TAGCPHSAPSTPPPF*SRRRQGPHRSRWSP
Trigger: TGGGCTCCAGCGACTTCTGTGTGGACCCTGACGCCTACGTGACCAAAATGGTGGAGGAGTACTCGGTGCTGAGTGGGGACATCCTGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACCCCACCAGGATGCCCTaGGAGCTGCGGATGAGGCCA +
Preference number: 5 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHPTRMP*ELRMRP
Trigger: TGGCCTCATCCGCAGCTCCAAGGGCATCCTGGTGGG...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000403167.5
CDS-3UTR CAA 90 bp CAGGGGCTGCTCCCAACCAGGCCCATTCACTACCAACCTTGCCATGACATGTGGAAGCCAAAAGCACCATaGGGGAGCCTCGCTCCCACT +
Preference number: 5 (lower is better)
Translates to: QGLLPTRPIHYQPCHDMWKPKAP*GSLAPT
Trigger: AGTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTT...CCACATGTCATGGCAAGGTTGGTAGTGAATGGGCCTGGTTGGGAGCAGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp GGGAGGAGACCGAGGCCACAGGGACCTCAGTCCAAAGCCCGCGGGAGGTTCATTTGCTTGGAACTCGAATaGCATAGTGAGATGGGTGGG +
Preference number: 5 (lower is better)
Translates to: GRRPRPQGPQSKARGRFICLELE*HSEMGG
Trigger: CCCACCCATCTCACTATGCAATTCGAGTTCCAAGCA...AATGAACCTCCCGCGGGCTTTGGACTGAGGTCCCTGTGGCCTCGGTCTCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp GGCAGCAGGCACCAGCCAGATGCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGGGCAGGAGCAAATGTaGCTTGGAACTCGAATTGCA +
Preference number: 5 (lower is better)
Translates to: GSRHQPDAPVGVARSWDGGQEQM*LGTRIA
Trigger: TGCAATTCGAGTTCCAAGCAACATTTGCTCCTGCCC...TCCATCCCATGACCTCGCCACACCTACTGGGGCATCTGGCTGGTGCCTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp ACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTCAGGAGAACGCTACTGCAGCCTaGACTCCCAGACAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: TLVSRKSQTGTHAHHGQENATAA*TPRQLL
Trigger: GAGCAGCTGTCTGGGAGTCAAGGCTGCAGTAGCGTT...CTCCTGACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGCCATATTCCCCCTTTTaGGTCCCAGACACCAGCACA +
Preference number: 5 (lower is better)
Translates to: APVGVARSWDGVVRNTAPPYSPF*VPDTST
Trigger: TGTGCTGGTGTCTGGGACCAAAAAGGGGGAATATGG...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp TCTTCAACCTTGGTGAGTAGAAAGTCACAGACGGGCACACACGCACACCACGGTATCTCCACCAGTGCCTaGTGGCTGCCCGACAGCTTC +
Preference number: 5 (lower is better)
Translates to: SSTLVSRKSQTGTHAHHGISTSA*WLPDSF
Trigger: GAAGCTGTCGGGCAGCCACAAGGCACTGGTGGAGAT...ACCGTGGTGTGCGTGTGTGCCCGTCTGTGACTTTCTACTCACCAAGGTTGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp CAGCAAACATCGTACACTAAAGCCAAAAGCACCATTGGGGAGCCTCGCTCCCACGGGCACCCGTGGAGTTaGGGGGTGAGGTTAGTGGTT +
Preference number: 5 (lower is better)
Translates to: QQTSYTKAKSTIGEPRSHGHPWS*GVRLVV
Trigger: AACCACTAACCTCACCCCCAAACTCCACGGGTGCCC...GTGGGAGCGAGGCTCCCCAATGGTGCTTTTGGCTTTAGTGTACGATGTTTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp TCAGGTGTGACCCGAGTTGGCGGTACGGGCCCAGAGCCCCTGCGTCTCCACTGTTTCCTTTCTTCAACCTaGGTGAGTAGAAAGTCACAG +
Preference number: 5 (lower is better)
Translates to: SGVTRVGGTGPEPLRLHCFLSST*VSRKSQ
Trigger: CTGTGACTTTCTACTCACCAAGGTTGAAGAAAGGAA...ACAGTGGAGACGCAGGGGCTCTGGGCCCGTACCGCCAACTCGGGTCACACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGTTCCTTTCTTCAACCTaGGTGAGTAGAAAGTCACAG +
Preference number: 5 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLFLSST*VSRKSQ
Trigger: CTGTGACTTTCTACTCACCAAGGTTGAAGAAAGGAA...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGTGCTTGGAACTCGAATaGCATAGTGAGATGGGTGGG +
Preference number: 5 (lower is better)
Translates to: APVGVARSWDGVVRNTAPCLELE*HSEMGG
Trigger: CCCACCCATCTCACTATGCAATTCGAGTTCCAAGCA...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp CCAAAGCCCGCGGGAGGTTCATTCCCGAGGACAGTCCTCCTGGGGCAGCACCTGAGGAGCAAATGTTGCTaGGAACTCGAATTGCATAGT +
Preference number: 5 (lower is better)
Translates to: PKPAGGSFPRTVLLGQHLRSKCC*ELELHS
Trigger: ACTATGCAATTCGAGTTCCAAGCAACATTTGCTCCT...CAGGTGCTGCCCCAGGAGGACTGTCCTCGGGAATGAACCTCCCGCGGGCTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGTTCCTTTCTTCAACCTaGGTGAGTAGAAAGTCACAG +
Preference number: 5 (lower is better)
Translates to: LASPPLTLCPFTWQAASRFLSST*VSRKSQ
Trigger: CTGTGACTTTCTACTCACCAAGGTTGAAGAAAGGAA...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp CTGGCCTCACCGCCTCTCACGCTATGTCCATTCACCTGGCAGGCAGCCTCACGGAGGAGCAAATGTTGCTaGGAACTCGAATTGCATAGT +
Preference number: 5 (lower is better)
Translates to: LASPPLTLCPFTWQAASRRSKCC*ELELHS
Trigger: ACTATGCAATTCGAGTTCCAAGCAACATTTGCTCCT...CCGTGAGGCTGCCTGCCAGGTGAATGGACATAGCGTGAGAGGCGGTGAGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS-3UTR CAA 90 bp GCCCCAGTAGGTGTGGCGAGGTCATGGGATGGAGTAGTTAGGAACACGGCACCGAGGAGCAAATGTTGCTaGGAACTCGAATTGCATAGT +
Preference number: 5 (lower is better)
Translates to: APVGVARSWDGVVRNTAPRSKCC*ELELHS
Trigger: ACTATGCAATTCGAGTTCCAAGCAACATTTGCTCCT...CGGTGCCGTGTTCCTAACTACTCCATCCCATGACCTCGCCACACCTACTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS TCA 72 bp GGTGCAGGAGGCTCACCCACCAGGGCGCCGCGTAGCTaGCCCCGGCCATGGCGGGGCCCGGCCGCCTCCGGA +
Preference number: 6 (lower is better)
Translates to: GAGGSPTRAPRS*PRPWRGPAASG
Trigger: TCCGGAGGCGGCCGGGCCCCGCCATGGCCGGGGTCAGCTACGCGGCGCCCTGGTGGGTGAGCCTCCTGCACC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258796.12
CDS GCA 72 bp GGCTCGGGCCGCCCGGCCAGCTGCCGCTCCAGGGTCTaGAGGCTGGGCTCCGCCGTGTGGTTCAGCCCCACC +
Preference number: 6 (lower is better)
Translates to: GSGRPASCRSRV*RLGSAVWFSPT
Trigger: GGTGGGGCTGAACCACACGGCGGAGCCCAGCCTGCAGACCCTGGAGCGGCAGCTGGCCGGGCGGCCCGAGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS CCA 72 bp TGCCGCTCCAGGGTCTGCAGGCTGGGCTCCGCCGTGTaGTTCAGCCCCACCGCCGTGTCCCACACGCGGTCC +
Preference number: 6 (lower is better)
Translates to: CRSRVCRLGSAV*FSPTAVSHTRS
Trigger: GGACCGCGTGTGGGACACGGCGGTGGGGCTGAACCACACGGCGGAGCCCAGCCTGCAGACCCTGGAGCGGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS GCA 72 bp CCGTGTCCCACACGCGGTCCTGGACCCCGGCCACCGTaGGGTTGGCGTGGCGGAGCGAGTAGGTGGCCCTAT +
Preference number: 6 (lower is better)
Translates to: PCPTRGPGPRPP*GWRGGASRWPY
Trigger: ATAGGGCCACCTACTCGCTCCGCCACGCCAACCGCACGGTGGCCGGGGTCCAGGACCGCGTGTGGGACACGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS GCA 72 bp CCAGGTAGCCCAGCCACCTGCAGGCAAACCTGGGAGTaGGCCAGGGCACAGGGACCCGGGGCCTGGGAGTGG +
Preference number: 6 (lower is better)
Translates to: PGSPATCRQTWE*ARAQGPGAWEW
Trigger: CCACTCCCAGGCCCCGGGTCCCTGTGCCCTGGCGCACTCCCAGGTTTGCCTGCAGGTGGCTGGGCTACCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403167.5
CDS CCA 72 bp CCCACACGCGGTCCTGGACCCCGGCCACCGTGCGGTTaGCGTGGCGGAGCGAGTAGGTGGCCCTATGGATGC +
Preference number: 6 (lower is better)
Translates to: PTRGPGPRPPCG*RGGASRWPYGC
Trigger: GCATCCATAGGGCCACCTACTCGCTCCGCCACGCCAACCGCACGGTGGCCGGGGTCCAGGACCGCGTGTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS GCA 72 bp GGGCCGCGGCCGGGATGCTGGTCTCACTGCCGTAGCTaGTGCCACAGCTGTACAGGCTGGGCATGTGGACGC +
Preference number: 6 (lower is better)
Translates to: GPRPGCWSHCRS*CHSCTGWACGR
Trigger: GCGTCCACATGCCCAGCCTGTACAGCTGTGGCAGCAGCTACGGCAGTGAGACCAGCATCCCGGCCGCGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
ENST00000429448.1
ENST00000498454.1
CDS GCA 72 bp CCGCGGCCGGGATGCTGGTCTCACTGCCGTAGCTGCTaGCACAGCTGTACAGGCTGGGCATGTGGACGCGGT +
Preference number: 6 (lower is better)
Translates to: PRPGCWSHCRSC*HSCTGWACGRG
Trigger: ACCGCGTCCACATGCCCAGCCTGTACAGCTGTGGCAGCAGCTACGGCAGTGAGACCAGCATCCCGGCCGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
ENST00000429448.1
ENST00000498454.1
CDS GCA 72 bp GGCGAGGCTGGCTCGTGGCGAGGTATTTGGCTCTCATaGTGGAGGTGTATGAGGGCGGCGGGGACTCGCGCC +
Preference number: 6 (lower is better)
Translates to: GEAGSWRGIWLS*WRCMRAAGTRA
Trigger: GGCGCGAGTCCCCGCCGCCCTCATACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS CCA 72 bp CGGCCACCGTGCGGTTGGCGTGGCGGAGCGAGTAGGTaGCCCTATGGATGCCATCACTGGTCTCCCCGTTGC +
Preference number: 6 (lower is better)
Translates to: RPPCGWRGGASR*PYGCHHWSPRC
Trigger: GCAACGGGGAGACCAGTGATGGCATCCATAGGGCCACCTACTCGCTCCGCCACGCCAACCGCACGGTGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS CCA 72 bp CCTCCAGCGACACCGCCGTGTTCCTCCAAAAGGGGATaGCGGCCGTGTAGCCCAGCAGCGTCTCCAGCAGGC +
Preference number: 6 (lower is better)
Translates to: PPATPPCSSKRG*RPCSPAASPAG
Trigger: GCCTGCTGGAGACGCTGCTGGGCTACACGGCCGCCATCCCCTTTTGGAGGAACACGGCGGTGTCGCTGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS CCA 72 bp TGCTGCAGGTTCACCTCCGTGCCATTCAGCACCTCCTaGACGCGGAGGAGGGGGTCCTTAGTGGCCGGCTGC +
Preference number: 6 (lower is better)
Translates to: CCRFTSVPFSTS*TRRRGSLVAGC
Trigger: GCAGCCGGCCACTAAGGACCCCCTCCTCCGCGTCCAGGAGGTGCTGAATGGCACGGAGGTGAACCTGCAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
ENST00000498454.1
CDS CCA 72 bp GCCTGGTCTCTGGGTGGCCCCAGGCACTCGGAGACCTaGGCAGGTTGCTTCAGGTCCTGGGCTACAAGTGCC +
Preference number: 6 (lower is better)
Translates to: AWSLGGPRHSET*AGCFRSWATSA
Trigger: GGCACTTGTAGCCCAGGACCTGAAGCAACCTGCCCAGGTCTCCGAGTGCCTGGGGCCACCCAGAGACCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477439.1
CDS GCA 72 bp CCACGACATCCTGCATCTCCACCAGTGCCTTGTGGCTaGCCGACAGCTTCTGCTGGAAGGGGTTGGCGGCGC +
Preference number: 6 (lower is better)
Translates to: PRHPASPPVPCG*PTASAGRGWRR
Trigger: GCGCCGCCAACCCCTTCCAGCAGAAGCTGTCGGGCAGCCACAAGGCACTGGTGGAGATGCAGGATGTCGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS GCA 72 bp AGTCTGATCCTGTCTGGGGTCTGTGCACCGAGAAGCTaGACTCAGGGGTGGGCACCGTCCATGGCGTGCCCC +
Preference number: 6 (lower is better)
Translates to: SLILSGVCAPRS*TQGWAPSMACP
Trigger: GGGGCACGCCATGGACGGTGCCCACCCCTGAGTGCAGCTTCTCGGTGCACAGACCCCAGACAGGATCAGACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400376.2
CDS GCA 72 bp TACCACAGCGTTCGGGCACTGTCCATGGGCTTAAACTaGCAGCCCGCGTGGCTGCCAGAGTCCAGGGCAGCC +
Preference number: 6 (lower is better)
Translates to: YHSVRALSMGLN*QPAWLPESRAA
Trigger: GGCTGCCCTGGACTCTGGCAGCCACGCGGGCTGGCAGTTTAAGCCCATGGACAGTGCCCGAACGCTGTGGTA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS CCA 72 bp TGGAGTCAGGGCGAGGCTGGCTCGTGGCGAGGTATTTaGCTCTCATGCTGGAGGTGTATGAGGGCGGCGGGG +
Preference number: 6 (lower is better)
Translates to: WSQGEAGSWRGI*LSCWRCMRAAG
Trigger: CCCCGCCGCCCTCATACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCCCTGACTCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS CCA 72 bp ACCGTCCATGGCGTGCCCCCACGCTGGATGAGATGGTaGGGCTGGCCCCACACTGCTACAGGCTGCATACAG +
Preference number: 6 (lower is better)
Translates to: TVHGVPPRWMRW*GWPHTATGCIQ
Trigger: CTGTATGCAGCCTGTAGCAGTGTGGGGCCAGCCCCACCATCTCATCCAGCGTGGGGGCACGCCATGGACGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400376.2
CDS CAA 72 bp CTGGAGTCAGGGCGAGGCTGGCTCGTGGCGAGGTATTaGGCTCTCATGCTGGAGGTGTATGAGGGCGGCGGG +
Preference number: 6 (lower is better)
Translates to: LESGRGWLVARY*ALMLEVYEGGG
Trigger: CCCGCCGCCCTCATACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCCCTGACTCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS TCA 72 bp AGTCCAGATGCAGGCTGCGGCAGTCCACCAGGGCGGTaGGGTGCTGCAGGTTCACCTCCGTGCCATTCAGCA +
Preference number: 6 (lower is better)
Translates to: SPDAGCGSPPGR*GAAGSPPCHSA
Trigger: TGCTGAATGGCACGGAGGTGAACCTGCAGCACCTCACCGCCCTGGTGGACTGCCGCAGCCTGCATCTGGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
ENST00000429448.1
ENST00000498454.1
CDS CCA 72 bp TCTCACTGCCGTAGCTGCTGCCACAGCTGTACAGGCTaGGCATGTGGACGCGGTAGAGGCTGTCGTGCGCCT +
Preference number: 6 (lower is better)
Translates to: SHCRSCCHSCTG*ACGRGRGCRAP
Trigger: AGGCGCACGACAGCCTCTACCGCGTCCACATGCCCAGCCTGTACAGCTGTGGCAGCAGCTACGGCAGTGAGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
ENST00000429448.1
ENST00000498454.1
CDS CCA 72 bp CTCTTGCAGGAAATCAAGGGCTGGGGGCAAGTGTGCTaGGATGCTGGCCACAGGGGCACAGGCCACAGGCAC +
Preference number: 6 (lower is better)
Translates to: LLQEIKGWGQVC*DAGHRGTGHRH
Trigger: GTGCCTGTGGCCTGTGCCCCTGTGGCCAGCATCCCAGCACACTTGCCCCCAGCCCTTGATTTCCTGCAAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477439.1
CDS GCA 72 bp AGGTGGCCCTATGGATGCCATCACTGGTCTCCCCGTTaGCGTAGAATCCCACTGCGATGCCGGCGCTGCACA +
Preference number: 6 (lower is better)
Translates to: RWPYGCHHWSPR*RRIPLRCRRCT
Trigger: TGTGCAGCGCCGGCATCGCAGTGGGATTCTACGGCAACGGGGAGACCAGTGATGGCATCCATAGGGCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS CCA 72 bp GGCGGAGCGAGTAGGTGGCCCTATGGATGCCATCACTaGTCTCCCCGTTGCCGTAGAATCCCACTGCGATGC +
Preference number: 6 (lower is better)
Translates to: GGASRWPYGCHH*SPRCRRIPLRC
Trigger: GCATCGCAGTGGGATTCTACGGCAACGGGGAGACCAGTGATGGCATCCATAGGGCCACCTACTCGCTCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258796.12
ENST00000407643.5
CDS CCA 72 bp TCAGCCACGACATCCTGCATCTCCACCAGTGCCTTGTaGCTGCCCGACAGCTTCTGCTGGAAGGGGTTGGCG +
Preference number: 6 (lower is better)
Translates to: SATTSCISTSAL*LPDSFCWKGLA
Trigger: CGCCAACCCCTTCCAGCAGAAGCTGTCGGGCAGCCACAAGGCACTGGTGGAGATGCAGGATGTCGTGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS GCA 72 bp CAGAAGCTCAGCCACGACATCCTGCATCTCCACCAGTaGCTTGTGGCTGCCCGACAGCTTCTGCTGGAAGGG +
Preference number: 6 (lower is better)
Translates to: QKLSHDILHLHQ*LVAARQLLLEG
Trigger: CCCTTCCAGCAGAAGCTGTCGGGCAGCCACAAGGCACTGGTGGAGATGCAGGATGTCGTGGCTGAGCTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS GCA 72 bp CCGTCCTCATCAGGGCCTCTCTTTTGCTGCCAGGTGTaGGGGACGCTGCAGACGATGGAGCTGAACATGAGG +
Preference number: 6 (lower is better)
Translates to: PSSSGPLFCCQV*GTLQTMELNMR
Trigger: CCTCATGTTCAGCTCCATCGTCTGCAGCGTCCCGCACACCTGGCAGCAAAAGAGAGGCCCTGATGAGGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
ENST00000429448.1
ENST00000498454.1
CDS GCA 72 bp AGGTCCTGGGCTACAAGTGCCCCACGTGCAGACTCTTaGAGGAAATCAAGGGCTGGGGGCAAGTGTGCTGGG +
Preference number: 6 (lower is better)
Translates to: RSWATSAPRADS*RKSRAGGKCAG
Trigger: CCCAGCACACTTGCCCCCAGCCCTTGATTTCCTGCAAGAGTCTGCACGTGGGGCACTTGTAGCCCAGGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477439.1
CDS GCA 72 bp AGGCAGACCCTCCCACAGAGGAGCTGCCGCTCTCTCTaGCTTCCAAACGAGGAGACCAAGGCCCAGCAACAA +
Preference number: 6 (lower is better)
Translates to: RQTLPQRSCRSL*LPNEETKAQQQ
Trigger: TTGTTGCTGGGCCTTGGTCTCCTCGTTTGGAAGGCAGAGAGAGCGGCAGCTCCTCTGTGGGAGGGTCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477439.1
CDS CCA 72 bp TCAGCCACGACATCCTGCATCTCCACCAGTGCCTTGTaGCTGCCCGACAGCTTCTGCTCCAGAGAGGAGACC +
Preference number: 6 (lower is better)
Translates to: SATTSCISTSAL*LPDSFCSREET
Trigger: GGTCTCCTCTCTGGAGCAGAAGCTGTCGGGCAGCCACAAGGCACTGGTGGAGATGCAGGATGTCGTGGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498454.1
CDS CAA 72 bp AGCTCAGCCACGACATCCTGCATCTCCACCAGTGCCTaGTGGCTGCCCGACAGCTTCTGCTGGAAGGGGTTG +
Preference number: 6 (lower is better)
Translates to: SSATTSCISTSA*WLPDSFCWKGL
Trigger: CAACCCCTTCCAGCAGAAGCTGTCGGGCAGCCACAAGGCACTGGTGGAGATGCAGGATGTCGTGGCTGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS CAA 72 bp CAGGTCCTGGGCTACAAGTGCCCCACGTGCAGACTCTaGCAGGAAATCAAGGGCTGGGGGCAAGTGTGCTGG +
Preference number: 6 (lower is better)
Translates to: QVLGYKCPTCRL*QEIKGWGQVCW
Trigger: CCAGCACACTTGCCCCCAGCCCTTGATTTCCTGCAAGAGTCTGCACGTGGGGCACTTGTAGCCCAGGACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477439.1
CDS CAA 72 bp AGCTCAGCCACGACATCCTGCATCTCCACCAGTGCCTaGTGGCTGCCCGACAGCTTCTGCTCCAGAGAGGAG +
Preference number: 6 (lower is better)
Translates to: SSATTSCISTSA*WLPDSFCSREE
Trigger: CTCCTCTCTGGAGCAGAAGCTGTCGGGCAGCCACAAGGCACTGGTGGAGATGCAGGATGTCGTGGCTGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498454.1
CDS CAA 90 bp AGGTTGCTTCAGGTCCTGGGCTACAAGTGCCCCACGTGCAGACTCTaGCAGGAAATCAAGGGCTGGGGGCAAGTGTGCTGGGATGCTGGC +
Preference number: 6 (lower is better)
Translates to: RLLQVLGYKCPTCRL*QEIKGWGQVCWDAG
Trigger: GCCAGCATCCCAGCACACTTGCCCCCAGCCCTTGATTTCCTGCAAGAGTCTGCACGTGGGGCACTTGTAGCCCAGGACCTGAAGCAACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477439.1
CDS CAA 90 bp GTCCTCAGAAGCTCAGCCACGACATCCTGCATCTCCACCAGTGCCTaGTGGCTGCCCGACAGCTTCTGCTCCAGAGAGGAGACCAAGTCC +
Preference number: 6 (lower is better)
Translates to: VLRSSATTSCISTSA*WLPDSFCSREETKS
Trigger: GGACTTGGTCTCCTCTCTGGAGCAGAAGCTGTCGGGCAGCCACAAGGCACTGGTGGAGATGCAGGATGTCGTGGCTGAGCTTCTGAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498454.1
CDS GCA 72 bp GGCGAGGCTGGCTCGTGGCGAGGTATTTGGCTCTCATaGTGGAGGTGTACTGTCGCTCTGAGGGAACAGCTA +
Preference number: 6 (lower is better)
Translates to: GEAGSWRGIWLS*WRCTVALREQL
Trigger: TAGCTGTTCCCTCAGAGCGACAGTACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCCAGCCTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429448.1
CDS GCA 72 bp GACCTGGGCAGGTTGCTTCAGGTCCTGGGCTACAAGTaGCCCACGTGCAGACTCTTGCAGGAAATCAAGGGC +
Preference number: 6 (lower is better)
Translates to: DLGRLLQVLGYK*PTCRLLQEIKG
Trigger: GCCCTTGATTTCCTGCAAGAGTCTGCACGTGGGGCACTTGTAGCCCAGGACCTGAAGCAACCTGCCCAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477439.1
CDS GCA 72 bp CAGAAGCTCAGCCACGACATCCTGCATCTCCACCAGTaGCTTGTGGCTGCCCGACAGCTTCTGCTCCAGAGA +
Preference number: 6 (lower is better)
Translates to: QKLSHDILHLHQ*LVAARQLLLQR
Trigger: TCTCTGGAGCAGAAGCTGTCGGGCAGCCACAAGGCACTGGTGGAGATGCAGGATGTCGTGGCTGAGCTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498454.1
CDS CCA 72 bp ACATGGAAGAGGCCCCATCAGGAGTCTGATCCTGTCTaGGGTCTGTGCACCGAGAAGCTGCACTCAGGGGTG +
Preference number: 6 (lower is better)
Translates to: TWKRPHQESDPV*GLCTEKLHSGV
Trigger: CACCCCTGAGTGCAGCTTCTCGGTGCACAGACCCCAGACAGGATCAGACTCCTGATGGGGCCTCTTCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400376.2
CDS CCA 72 bp TGTCCCCACTCAGCACCGAGTACTCCTCCACCATTTTaGTCACGTAGGCGTCAGGGTCCACACAGAAGTCGC +
Preference number: 6 (lower is better)
Translates to: CPHSAPSTPPPF*SRRRQGPHRSR
Trigger: GCGACTTCTGTGTGGACCCTGACGCCTACGTGACCAAAATGGTGGAGGAGTACTCGGTGCTGAGTGGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
CDS CCA 72 bp CTGGCACCCCAGAGGGCATTCAGAGCGTCTGGGTCATaGGGACTGGTGTCAGTTCTTGAGAAAGGCTCCCAT +
Preference number: 6 (lower is better)
Translates to: LAPQRAFRASGS*GLVSVLEKGSH
Trigger: ATGGGAGCCTTTCTCAAGAACTGACACCAGTCCCCATGACCCAGACGCTCTGAATGCCCTCTGGGGTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403167.5
CDS CCA 72 bp CCCAGAGGGCATTCAGAGCGTCTGGGTCATGGGGACTaGTGTCAGTTCTTGAGAAAGGCTCCCATTAGGGGA +
Preference number: 6 (lower is better)
Translates to: PRGHSERLGHGD*CQFLRKAPIRG
Trigger: TCCCCTAATGGGAGCCTTTCTCAAGAACTGACACCAGTCCCCATGACCCAGACGCTCTGAATGCCCTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403167.5
CDS CCA 72 bp CGCCCAATGAGTGGGGTGTTCTCACAGCGGGGGTTCTaGAAATTAGCGTTCTGGCTCATGTACTCAGTGACC +
Preference number: 6 (lower is better)
Translates to: RPMSGVFSQRGF*KLAFWLMYSVT
Trigger: GGTCACTGAGTACATGAGCCAGAACGCTAATTTCCAGAACCCCCGCTGTGAGAACACCCCACTCATTGGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258796.12
ENST00000403167.5
ENST00000407643.5
ENST00000429448.1