Pregenerated sensors for TTTY4B (Homo sapiens)
Ensembl gene IDs: ENSG00000235412Ensembl transcript IDs: ENST00000420149.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 72 bp | TCGCATAATGCCTCTTGTGGACAATGTCCAGGCAGGTaGGGAGAGTCATATCACCAAAATGATGGGCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: SHNASCGQCPGR*GESYHQNDGLR Trigger: TCTGAGCCCATCATTTTGGTGATATGACTCTCCTCACCTGCCTGGACATTGTCCACAAGAGGCATTATGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420149.1 |
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| CDS CCA 72 bp | TGTCAGCAGGGCACTAACCGAAAAGTCAGAAAACTTTaGTGCCAGTCCCAGCTCTATCGCATAATGCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: CQQGTNRKVRKL*CQSQLYRIMPL Trigger: AAGAGGCATTATGCGATAGAGCTGGGACTGGCACCAAAGTTTTCTGACTTTTCGGTTAGTGCCCTGCTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000420149.1 |
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| CDS CCA 72 bp | ATGCCACACTCTTCACTGAAAGGAGGTTCAGACAAATaGGGAACATCACATTACCTAGATGATGGGCCCATA | + |
|
Preference number: 6 (lower is better) Translates to: MPHSSLKGGSDK*GTSHYLDDGPI Trigger: TATGGGCCCATCATCTAGGTAATGTGATGTTCCCCATTTGTCTGAACCTCCTTTCAGTGAAGAGTGTGGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420149.1 |
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| CDS TCA 72 bp | ATTCCAGAGAGGAAAGTTACATCACTGATTAGTCACTaGCTTCACCACGTGAATTCTTTTTCCACCTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: IPERKVTSLISH*LHHVNSFSTFA Trigger: AGCAAAGGTGGAAAAAGAATTCACGTGGTGAAGTCAGTGACTAATCAGTGATGTAACTTTCCTCTCTGGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420149.1 |
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| CDS CCA 72 bp | AACCTAGTTATAAGAGGCAACATTTCTTCTATTGGCTaGGTCCACATAAGAGAGTCATTATCATGCCTATTA | + |
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Preference number: 6 (lower is better) Translates to: NLVIRGNISSIG*VHIRESLSCLL Trigger: TAATAGGCATGATAATGACTCTCTTATGTGGACCCAGCCAATAGAAGAAATGTTGCCTCTTATAACTAGGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420149.1 |
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