Pregenerated sensors for TTTY13 (Homo sapiens)
Ensembl gene IDs: ENSG00000184991, ENSG00000285001Ensembl transcript IDs: ENST00000330337.2, ENST00000647246.1, ENST00000650849.1, ENST00000652128.1
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AATAGCTGTCATCACGGGCCTCATAGCGGTCACAGCTATAGCTGCTaGTGCTGTTGTAGCTTTGGATTCTTCTATTCAAACTGTGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: NSCHHGPHSGHSYSC*CCCSFGFFYSNCEL Trigger: GAGCTCACAGTTTGAATAGAAGAATCCAAAGCTACAACAGCAGCAGCAGCTATAGCTGTGACCGCTATGAGGCCCGTGATGACAGCTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000330337.2 ENST00000647246.1 ENST00000650849.1 ENST00000652128.1 |
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| CDS CCA 72 bp | TGGGTTCCTCAACTTTACCAAGCAACTCCACCGACCTaGGGGCGGATGAAGAGACTAGCTCGCACTGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: WVPQLYQATPPT*GRMKRLARTEE Trigger: TTCTTCAGTGCGAGCTAGTCTCTTCATCCGCCCCCAGGTCGGTGGAGTTGCTTGGTAAAGTTGAGGAACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000650849.1 ENST00000652128.1 |
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| CDS CAA 90 bp | GGCCTCATAGCGGTCACAGCTATAGCTGCTGCTGCTGTTGTAGCTTaGGATTCTTCTATTCAAACTGTGAGCTCTCGAATTTGGTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: GLIAVTAIAAAAVVA*DSSIQTVSSRIWFP Trigger: TGGGAACCAAATTCGAGAGCTCACAGTTTGAATAGAAGAATCCAAAGCTACAACAGCAGCAGCAGCTATAGCTGTGACCGCTATGAGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000330337.2 ENST00000647246.1 ENST00000650849.1 ENST00000652128.1 |
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| CDS CAA 72 bp | GCGGTCACAGCTATAGCTGCTGCTGCTGTTGTAGCTTaGGATTCTTCTATTCAAACTGTGAGCTCTCGAATT | + |
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Preference number: 6 (lower is better) Translates to: AVTAIAAAAVVA*DSSIQTVSSRI Trigger: AATTCGAGAGCTCACAGTTTGAATAGAAGAATCCAAAGCTACAACAGCAGCAGCAGCTATAGCTGTGACCGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000330337.2 ENST00000647246.1 ENST00000650849.1 ENST00000652128.1 |
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