RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTPAL (Homo sapiens)

Ensembl gene IDs: ENSG00000124120

Ensembl transcript IDs: ENST00000262605.9, ENST00000372904.7, ENST00000372906.2, ENST00000456317.1, ENST00000461134.1

Found 482 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTCTTGAGGTTCATGGGTTTGCCTCACCAGTGCGCTCCCCAGTGCTaGGTAAGGCTCACTGTGCTCCCTGGCTGGTCATTCCCCACCCTG +
Preference number: 1 (lower is better)
Translates to: FLRFMGLPHQCAPQC*VRLTVLPGWSFPTL
Trigger: CAGGGTGGGGAATGACCAGCCAGGGAGCACAGTGAGCCTTACTCAGCACTGGGGAGCGCACTGGTGAGGCAAACCCATGAACCTCAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR TCA 90 bp GCAATGGGCCAGAACTTCTCCCTGAAGGAACATACTCCCAGTTCTTaGGGTTCATGGGTTTGCCTCACCAGTGCGCTCCCCAGTGCTGAG +
Preference number: 1 (lower is better)
Translates to: AMGQNFSLKEHTPSS*GSWVCLTSALPSAE
Trigger: CTCAGCACTGGGGAGCGCACTGGTGAGGCAAACCCATGAACCTCAAGAACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGCCCATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR GCA 90 bp ACAAAGTGCTGCTTATGTCCTGATGCTTACATGATTCAGTTAAGGTaGTTTCCAAACCCGGTGACAACAGCTGGGGCCTTCATCTCCAGT +
Preference number: 1 (lower is better)
Translates to: TKCCLCPDAYMIQLR*FPNPVTTAGAFISS
Trigger: ACTGGAGATGAAGGCCCCAGCTGTTGTCACCGGGTTTGGAAAGCACCTTAACTGAATCATGTAAGCATCAGGACATAAGCAGCACTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR TCA 90 bp AAGTCTCCGGCTTCCACATTTGACCACAAAGTGCTGCTTATGTCCTaGTGCTTACATGATTCAGTTAAGGTGCTTTCCAAACCCGGTGAC +
Preference number: 1 (lower is better)
Translates to: KSPASTFDHKVLLMS*CLHDSVKVLSKPGD
Trigger: GTCACCGGGTTTGGAAAGCACCTTAACTGAATCATGTAAGCATCAGGACATAAGCAGCACTTTGTGGTCAAATGTGGAAGCCGGAGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR TCA 90 bp CCTATACTCAAAGCCAAACTGAATTTCAGTTTGAAGCAAGGAATGTaGCCAGTGGCTGAAACAGTGCCCCAAGCTGGTCAGAGAATTAGC +
Preference number: 1 (lower is better)
Translates to: PILKAKLNFSLKQGM*PVAETVPQAGQRIS
Trigger: GCTAATTCTCTGACCAGCTTGGGGCACTGTTTCAGCCACTGGTCACATTCCTTGCTTCAAACTGAAATTCAGTTTGGCTTTGAGTATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR GCA 90 bp ACCAGGGCTAAGGCTTTATGGATTTGGGAAAACTTAAGTTTCTATTaGAAACTTCAACCAGTGGGTCCCAGAGGTGCTTTGAAGTCTCCG +
Preference number: 1 (lower is better)
Translates to: TRAKALWIWENLSFY*KLQPVGPRGALKSP
Trigger: CGGAGACTTCAAAGCACCTCTGGGACCCACTGGTTGAAGTTTGCAATAGAAACTTAAGTTTTCCCAAATCCATAAAGCCTTAGCCCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR TCA 90 bp GTAAGTTTCCTGATGAGCAGCAGAGGTCTATACTTAGGGTTCCTGTaGAAAACACAAACTCCCAGTCTCACATTTGGTCACACTGAAGGT +
Preference number: 1 (lower is better)
Translates to: VSFLMSSRGLYLGFL*KTQTPSLTFGHTEG
Trigger: ACCTTCAGTGTGACCAAATGTGAGACTGGGAGTTTGTGTTTTTCACAGGAACCCTAAGTATAGACCTCTGCTGCTCATCAGGAAACTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR TCA 90 bp AAAGTTAATTTCCAAGTGTTTGTGCAATGGGCCAGAACTTCTCCCTaGAGGAACATACTCCCAGTTCTTGAGGTTCATGGGTTTGCCTCA +
Preference number: 1 (lower is better)
Translates to: KVNFQVFVQWARTSP*RNILPVLEVHGFAS
Trigger: TGAGGCAAACCCATGAACCTCAAGAACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGCCCATTGCACAAACACTTGGAAATTAACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR CCA 90 bp AACTACTGTAGCCAGGTTTACAATATAGTACCAGAGTCTCAGGGATaGAAGGAATTCATCATACAAGATCCTGGTCACCTTAACCTGGCC +
Preference number: 1 (lower is better)
Translates to: NYCSQVYNIVPESQG*KEFIIQDPGHLNLA
Trigger: GGCCAGGTTAAGGTGACCAGGATCTTGTATGATGAATTCCTTCCATCCCTGAGACTCTGGTACTATATTGTAAACCTGGCTACAGTAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR GCA 90 bp CCACACTATCTTGAATTTAGGGAAAAGTTAATTTCCAAGTGTTTGTaGAATGGGCCAGAACTTCTCCCTGAAGGAACATACTCCCAGTTC +
Preference number: 1 (lower is better)
Translates to: PHYLEFREKLISKCL*NGPELLPEGTYSQF
Trigger: GAACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGCCCATTGCACAAACACTTGGAAATTAACTTTTCCCTAAATTCAAGATAGTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR CCA 90 bp TTGGCCAAATTATTTCATACAAGTAGTTCTCACTGGCCAAACAGGTaGTTTTTCTCCTGGAAAAGTGGGATCAAAGTGACTTTGGTCCTG +
Preference number: 1 (lower is better)
Translates to: LAKLFHTSSSHWPNR*FFSWKSGIKVTLVL
Trigger: CAGGACCAAAGTCACTTTGATCCCACTTTTCCAGGAGAAAAACCACCTGTTTGGCCAGTGAGAACTACTTGTATGAAATAATTTGGCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR CCA 90 bp CACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCACTaGCCAAACAGGTGGTTTTTCTCCTGGAAAAGTGGGATCAAAGTG +
Preference number: 1 (lower is better)
Translates to: HTEGLAKLFHTSSSH*PNRWFFSWKSGIKV
Trigger: CACTTTGATCCCACTTTTCCAGGAGAAAAACCACCTGTTTGGCCAGTGAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR TCA 90 bp TTCAAATTTCAGAGTATTGTTTTCTCCCTAACTGAGCTGTCTGCTTaGCTGGTTAGTCTAATAAATGCACGGAGAAGGTGCACACACAAC +
Preference number: 1 (lower is better)
Translates to: FKFQSIVFSLTELSA*LVSLINARRRCTHN
Trigger: GTTGTGTGTGCACCTTCTCCGTGCATTTATTAGACTAACCAGTCAAGCAGACAGCTCAGTTAGGGAGAAAACAATACTCTGAAATTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR CCA 90 bp GAAAAACACAAACTCCCAGTCTCACATTTGGTCACACTGAAGGTTTaGCCAAATTATTTCATACAAGTAGTTCTCACTGGCCAAACAGGT +
Preference number: 1 (lower is better)
Translates to: EKHKLPVSHLVTLKV*PNYFIQVVLTGQTG
Trigger: ACCTGTTTGGCCAGTGAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGTGACCAAATGTGAGACTGGGAGTTTGTGTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR TCA 90 bp CCCAGGAATACACATAATAGTTTCTTTAAAGGCAGGGCTAATTGGTaGCACATCTCTCTTGGAAAGACACATGTACCACAAACAAAAACA +
Preference number: 1 (lower is better)
Translates to: PRNTHNSFFKGRANW*HISLGKTHVPQTKT
Trigger: TGTTTTTGTTTGTGGTACATGTGTCTTTCCAAGAGAGATGTGTCACCAATTAGCCCTGCCTTTAAAGAAACTATTATGTGTATTCCTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR TCA 90 bp GGAAAAGAATTAAAGATGGTGACCCTGGGGGACGGGCTAGTAGCAGGAGTACAGGTCACACTGTGCATCTaGGGTCAGGCCCTCGGGCAG +
Preference number: 2 (lower is better)
Translates to: GKELKMVTLGDGLVAGVQVTLCI*GQALGQ
Trigger: CTGCCCGAGGGCCTGACCTCAGATGCACAGTGTGAC...CTGTACTCCTGCTACTAGCCCGTCCCCCAGGGTCACCATCTTTAATTCTTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372906.2
3UTR-3UTR TCA 90 bp CAGCAGCATCTCACTGCCTCACTAAACCTGCTGCCCAGTGAGATGAAAAGAAAATGCGCTCCCCAGTGCTaGGTAAGGCTCACTGTGCTC +
Preference number: 2 (lower is better)
Translates to: QQHLTASLNLLPSEMKRKCAPQC*VRLTVL
Trigger: GAGCACAGTGAGCCTTACTCAGCACTGGGGAGCGCA...TTTTCTTTTCATCTCACTGGGCAGCAGGTTTAGTGAGGCAGTGAGATGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR TCA 90 bp CAGCAGCATCTCACTGCCTCACTAAACCTGCTGCCCAGTGAGATGAAAAGAAAAACTCCGGACTTCAGGTaGTACACCCACCTCAGCCGC +
Preference number: 2 (lower is better)
Translates to: QQHLTASLNLLPSEMKRKTPDFR*YTHLSR
Trigger: GCGGCTGAGGTGGGTGTATCACCTGAAGTCCGGAGT...TTTTCTTTTCATCTCACTGGGCAGCAGGTTTAGTGAGGCAGTGAGATGCTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR GCA 90 bp GGGCCAGAACTTCTCCCTGAAGGAACATACTCCCAGTTCTTGAGGTTCATGGGTAGTGGGTCCCAGAGGTaGTTTGAAGTCTCCGGCTTC +
Preference number: 2 (lower is better)
Translates to: GPELLPEGTYSQFLRFMGSGSQR*FEVSGF
Trigger: GAAGCCGGAGACTTCAAAGCACCTCTGGGACCCACT...ACCCATGAACCTCAAGAACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR GCA 90 bp AGGGATGTTAAGCCAGCTCATCAAAGGCCACGTAGTAAGGTAAAGGTGGAGCCCAGTGGGTCCCAGAGGTaGTTTGAAGTCTCCGGCTTC +
Preference number: 2 (lower is better)
Translates to: RDVKPAHQRPRSKVKVEPSGSQR*FEVSGF
Trigger: GAAGCCGGAGACTTCAAAGCACCTCTGGGACCCACT...GGGCTCCACCTTTACCTTACTACGTGGCCTTTGATGAGCTGGCTTAACATCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR GCA 90 bp GGGCCAGAACTTCTCCCTGAAGGAACATACTCCCAGTTCTTGAGGTTCATGGGTCCATCCCACTTGCCCTaGTTGGGCCTTTTCAGCAGT +
Preference number: 2 (lower is better)
Translates to: GPELLPEGTYSQFLRFMGPSHLP*LGLFSS
Trigger: ACTGCTGAAAAGGCCCAAGCAGGGCAAGTGGGATGG...ACCCATGAACCTCAAGAACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CCA 90 bp AAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTTCGGGCAGCAGCGTCTaGCCCAGGATGCTGTCACAG +
Preference number: 2 (lower is better)
Translates to: KVTKGLPQNGLMLISQAVSGSSV*PRMLSQ
Trigger: CTGTGACAGCATCCTGGGCCAGACGCTGCTGCCCGA...AACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372906.2
3UTR-3UTR TCA 90 bp AGGGATGTTAAGCCAGCTCATCAAAGGCCACGTAGTAAGGTAAAGGTGGAGCCCGGCAGGGCTAATTGGTaGCACATCTCTCTTGGAAAG +
Preference number: 2 (lower is better)
Translates to: RDVKPAHQRPRSKVKVEPGRANW*HISLGK
Trigger: CTTTCCAAGAGAGATGTGTCACCAATTAGCCCTGCC...GGGCTCCACCTTTACCTTACTACGTGGCCTTTGATGAGCTGGCTTAACATCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR TCA 90 bp GCCAGGAGTGCTTTTTGGCACTTCCAGCTCAGCCAGTACCGTAGAGGATCCAGGGAAAATTGGTGTCAGTaGGTCCCAGGAATACACATA +
Preference number: 2 (lower is better)
Translates to: ARSAFWHFQLSQYRRGSRENWCQ*VPGIHI
Trigger: TATGTGTATTCCTGGGACTCACTGACACCAATTTTC...CCTGGATCCTCTACGGTACTGGCTGAGCTGGAAGTGCCAAAAAGCACTCCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR TCA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTCAGGCCAGTGGGTTCTaGACCCCCTCCTTCCCTCCT +
Preference number: 2 (lower is better)
Translates to: QYREVLPELTSFLNSRHVQASGF*TPSFPP
Trigger: AGGAGGGAAGGAGGGGGTTCAGAACCCACTGGCCTG...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR GCA 90 bp GCCAGGAGTGCTTTTTGGCACTTCCAGCTCAGCCAGTACCGTAGAGGATCCAGGATGATTCAGTTAAGGTaGTTTCCAAACCCGGTGACA +
Preference number: 2 (lower is better)
Translates to: ARSAFWHFQLSQYRRGSRMIQLR*FPNPVT
Trigger: TGTCACCGGGTTTGGAAAGCACCTTAACTGAATCAT...CCTGGATCCTCTACGGTACTGGCTGAGCTGGAAGTGCCAAAAAGCACTCCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR GCA 90 bp GCCAGGAGTGCTTTTTGGCACTTCCAGCTCAGCCAGTACCGTAGAGGATCCAGGTTGACCACAAAGTGCTaGTTATGTCCTGATGCTTAC +
Preference number: 2 (lower is better)
Translates to: ARSAFWHFQLSQYRRGSRLTTKC*LCPDAY
Trigger: GTAAGCATCAGGACATAAGCAGCACTTTGTGGTCAA...CCTGGATCCTCTACGGTACTGGCTGAGCTGGAAGTGCCAAAAAGCACTCCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CCA 90 bp AAAGATGGTGACCCTGGGGGACGGGCTAGTAGCAGGAGTACAGCTGTGACTTCAAGGCTTACCCCAAAATaGGCTCATGCTCATATCTCA +
Preference number: 2 (lower is better)
Translates to: KDGDPGGRASSRSTAVTSRLTPK*AHAHIS
Trigger: TGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCT...TGAAGTCACAGCTGTACTCCTGCTACTAGCCCGTCCCCCAGGGTCACCATCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372906.2
3UTR-3UTR CCA 90 bp AGGGATGTTAAGCCAGCTCATCAAAGGCCACGTAGTAAGGTAAAGGTGGAGCCCCACGCAGGGAGGTCTTaGTTTCACAGCTTGGTTCAA +
Preference number: 2 (lower is better)
Translates to: RDVKPAHQRPRSKVKVEPHAGRS*FHSLVQ
Trigger: TTGAACCAAGCTGTGAAACCAAGACCTCCCTGCGTG...GGGCTCCACCTTTACCTTACTACGTGGCCTTTGATGAGCTGGCTTAACATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CCA 90 bp AGCTGTGACTTCACAGCTCGCAAGGAGTCGTCACACTGTGCATCTGAGGTCAGGCAGGCAGGAACAGGTTaGCAGAACTCTTTCACAAAA +
Preference number: 2 (lower is better)
Translates to: SCDFTARKESSHCASEVRQAGTG*QNSFTK
Trigger: TTTTGTGAAAGAGTTCTGCCAACCTGTTCCTGCCTG...CCTGACCTCAGATGCACAGTGTGACGACTCCTTGCGAGCTGTGAAGTCACAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372906.2
3UTR-3UTR TCA 90 bp AGGGATGTTAAGCCAGCTCATCAAAGGCCACGTAGTAAGGTAAAGGTGGAGCCCACTCCTTCTAGAAGCTaGGTGAAACCACTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: RDVKPAHQRPRSKVKVEPTPSRS*VKPLLP
Trigger: AGGAAGGAGTGGTTTCACTCAGCTTCTAGAAGGAGT...GGGCTCCACCTTTACCTTACTACGTGGCCTTTGATGAGCTGGCTTAACATCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR TCA 90 bp CAGCAGCATCTCACTGCCTCACTAAACCTGCTGCCCAGTGAGATGAAAAGAAAAACAAGGAGACCACCTTaGTTTTCACGCAGGGAGGTC +
Preference number: 2 (lower is better)
Translates to: QQHLTASLNLLPSEMKRKTRRPP*FSRREV
Trigger: GACCTCCCTGCGTGAAAATCAAGGTGGTCTCCTTGT...TTTTCTTTTCATCTCACTGGGCAGCAGGTTTAGTGAGGCAGTGAGATGCTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CCA 90 bp CAGCAGCATCTCACTGCCTCACTAAACCTGCTGCCCAGTGAGATGAAAAGAAAAATCTGTCTTCCCTCTTaGGGAAGCCTCCACCCAGTT +
Preference number: 2 (lower is better)
Translates to: QQHLTASLNLLPSEMKRKICLPS*GSLHPV
Trigger: AACTGGGTGGAGGCTTCCCCAAGAGGGAAGACAGAT...TTTTCTTTTCATCTCACTGGGCAGCAGGTTTAGTGAGGCAGTGAGATGCTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR TCA 90 bp AACCCGGTGACAACAGCTGGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGTACAAGGAGCAAGACTaGATCCATGGACCCTTAAAT +
Preference number: 2 (lower is better)
Translates to: NPVTTAGAFISSKFPDEQYKEQD*IHGPLN
Trigger: ATTTAAGGGTCCATGGATTCAGTCTTGCTCCTTGTA...CTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCCAGCTGTTGTCACCGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR TCA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTGCTTTCCAAACCCGGTaGCAACAGCTGGGGCCTTCA +
Preference number: 2 (lower is better)
Translates to: QYREVLPELTSFLNSRHVAFQTR*QQLGPS
Trigger: TGAAGGCCCCAGCTGTTGTCACCGGGTTTGGAAAGC...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR TCA 90 bp GGGCCAGAACTTCTCCCTGAAGGAACATACTCCCAGTTCTTGAGGTTCATGGGTGAGGTTCTAAAGTGCTaGAATGCAGAACATTCAGGC +
Preference number: 2 (lower is better)
Translates to: GPELLPEGTYSQFLRFMGEVLKC*NAEHSG
Trigger: GCCTGAATGTTCTGCATTTCAGCACTTTAGAACCTC...ACCCATGAACCTCAAGAACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR TCA 90 bp AGGGATGTTAAGCCAGCTCATCAAAGGCCACGTAGTAAGGTAAAGGTGGAGCCCGAGGTTCTAAAGTGCTaGAATGCAGAACATTCAGGC +
Preference number: 2 (lower is better)
Translates to: RDVKPAHQRPRSKVKVEPEVLKC*NAEHSG
Trigger: GCCTGAATGTTCTGCATTTCAGCACTTTAGAACCTC...GGGCTCCACCTTTACCTTACTACGTGGCCTTTGATGAGCTGGCTTAACATCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR TCA 90 bp ATTTACTGTCCCATTTCCTTCCGACACCACACTATCTTGAATTTAGGGAAAAGTCAGGCCAGTGGGTTCTaGACCCCCTCCTTCCCTCCT +
Preference number: 2 (lower is better)
Translates to: IYCPISFRHHTILNLGKSQASGF*TPSFPP
Trigger: AGGAGGGAAGGAGGGGGTTCAGAACCCACTGGCCTG...ACTTTTCCCTAAATTCAAGATAGTGTGGTGTCGGAAGGAAATGGGACAGTAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CCA 90 bp AGGGATGTTAAGCCAGCTCATCAAAGGCCACGTAGTAAGGTAAAGGTGGAGCCCCACTGGCCAAACAGGTaGTTTTTCTCCTGGAAAAGT +
Preference number: 2 (lower is better)
Translates to: RDVKPAHQRPRSKVKVEPHWPNR*FFSWKS
Trigger: ACTTTTCCAGGAGAAAAACCACCTGTTTGGCCAGTG...GGGCTCCACCTTTACCTTACTACGTGGCCTTTGATGAGCTGGCTTAACATCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR TCA 90 bp GCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCCTGCATACAAGGAGCAAGACTaGATCCATGGACCCTTAAAT +
Preference number: 2 (lower is better)
Translates to: AYPKMGSCSYLRLFLHPAYKEQD*IHGPLN
Trigger: ATTTAAGGGTCCATGGATTCAGTCTTGCTCCTTGTA...TGCAGGATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
3UTR-3UTR TCA 90 bp CAGCAGCATCTCACTGCCTCACTAAACCTGCTGCCCAGTGAGATGAAAAGAAAACTTCTAGAAGCTGAGTaGAACCACTCCTTCCTTGTC +
Preference number: 2 (lower is better)
Translates to: QQHLTASLNLLPSEMKRKLLEAE*NHSFLV
Trigger: GACAAGGAAGGAGTGGTTTCACTCAGCTTCTAGAAG...TTTTCTTTTCATCTCACTGGGCAGCAGGTTTAGTGAGGCAGTGAGATGCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR GCA 90 bp CAGCAGCATCTCACTGCCTCACTAAACCTGCTGCCCAGTGAGATGAAAAGAAAACCCAAAATGGGCTCATaGTCATATCTCAGGCTGTTC +
Preference number: 2 (lower is better)
Translates to: QQHLTASLNLLPSEMKRKPKMGS*SYLRLF
Trigger: GAACAGCCTGAGATATGAGCATGAGCCCATTTTGGG...TTTTCTTTTCATCTCACTGGGCAGCAGGTTTAGTGAGGCAGTGAGATGCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR GCA 90 bp GCCAGGAGTGCTTTTTGGCACTTCCAGCTCAGCCAGTACCGTAGAGGATCCAGGAACTTAAGTTTCTATTaGAAACTTCAACCAGTGGGT +
Preference number: 2 (lower is better)
Translates to: ARSAFWHFQLSQYRRGSRNLSFY*KLQPVG
Trigger: ACCCACTGGTTGAAGTTTGCAATAGAAACTTAAGTT...CCTGGATCCTCTACGGTACTGGCTGAGCTGGAAGTGCCAAAAAGCACTCCTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CCA 90 bp GGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGCAGAGGTCTATACTTAGGAGGCTTACCCCAAAATaGGCTCATGCTCATATCTCA +
Preference number: 2 (lower is better)
Translates to: GAFISSKFPDEQQRSILRRLTPK*AHAHIS
Trigger: TGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCT...CCTAAGTATAGACCTCTGCTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CCA 90 bp CTCATATCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTTGCCCCCATACTCCTTaGGGAGGATGCTTCTTGGAA +
Preference number: 2 (lower is better)
Translates to: LISQAVPPSCSLITRSKTCPHTP*GGCFLE
Trigger: TTCCAAGAAGCATCCTCCCCAAGGAGTATGGGGGCA...AGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGATATGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372906.2
3UTR-3UTR TCA 90 bp CCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATTACAAGGAGCAAGACTaGATCCATGGACCCTTAAAT +
Preference number: 2 (lower is better)
Translates to: PKAYPKMGSCSYLRLFLHYKEQD*IHGPLN
Trigger: ATTTAAGGGTCCATGGATTCAGTCTTGCTCCTTGTA...ATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
3UTR-3UTR TCA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTACACAAACATCCTGGTaGAGCCACAAGGAGACCACC +
Preference number: 2 (lower is better)
Translates to: QYREVLPELTSFLNSRHVTQTSW*SHKETT
Trigger: GGTGGTCTCCTTGTGGCTTCACCAGGATGTTTGTGT...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR TCA 90 bp GTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCAGGAGTACAGCTGTaGCTTCACAGCTCGCAAGGA +
Preference number: 2 (lower is better)
Translates to: VIKVTKGLPQNGLMLISQAGVQL*LHSSQG
Trigger: TCCTTGCGAGCTGTGAAGTCACAGCTGTACTCCTGC...CTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372906.2
3UTR-3UTR GCA 90 bp ACAGCTGTGACTTCACAGCTCGCAAGGAGTCGTCACACTGTGCATCTGAGGTCACTTAAATTCTCCTTGTaGCTCTCCAAAGAAAAGAAG +
Preference number: 2 (lower is better)
Translates to: TAVTSQLARSRHTVHLRSLKFSL*LSKEKK
Trigger: CTTCTTTTCTTTGGAGAGGCACAAGGAGAATTTAAG...TGACCTCAGATGCACAGTGTGACGACTCCTTGCGAGCTGTGAAGTCACAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372906.2
3UTR-3UTR GCA 90 bp GGGCCAGAACTTCTCCCTGAAGGAACATACTCCCAGTTCTTGAGGTTCATGGGTCTCCAGATTAATAGTTaGAGACTGGGATTCCAAATG +
Preference number: 2 (lower is better)
Translates to: GPELLPEGTYSQFLRFMGLQINS*RLGFQM
Trigger: CATTTGGAATCCCAGTCTGCAACTATTAATCTGGAG...ACCCATGAACCTCAAGAACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR GCA 90 bp ATTTACTGTCCCATTTCCTTCCGACACCACACTATCTTGAATTTAGGGAAAAGTGCGATCTTGGCTCACTaGCACTTCTGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: IYCPISFRHHTILNLGKSAILAH*HFCLLG
Trigger: ACCCAGGAGGCAGAAGTGGCAGTGAGCCAAGATCGC...ACTTTTCCCTAAATTCAAGATAGTGTGGTGTCGGAAGGAAATGGGACAGTAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CCA 90 bp GGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGCAGAGGTCTATACTTAGGACAAGTAGTTCTCACTaGCCAAACAGGTGGTTTTTC +
Preference number: 2 (lower is better)
Translates to: GAFISSKFPDEQQRSILRTSSSH*PNRWFF
Trigger: GAAAAACCACCTGTTTGGCCAGTGAGAACTACTTGT...CCTAAGTATAGACCTCTGCTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR CAA 90 bp TTAAGTTTCTATTGCAAACTTCAACCAGTGGGTCCCAGAGGTGCTTaGAAGTCTCCGGCTTCCACATTTGACCACAAAGTGCTGCTTATG +
Preference number: 2 (lower is better)
Translates to: LSFYCKLQPVGPRGA*KSPASTFDHKVLLM
Trigger: CATAAGCAGCACTTTGTGGTCAAATGTGGAAGCCGGAGACTTCAAAGCACCTCTGGGACCCACTGGTTGAAGTTTGCAATAGAAACTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR CAA 90 bp CAAGAGCAAGTTAGAAATTCAAGACATGAAGCCAGGGTGGCACTTTaGGCTGTTTTTGTAGATTTCATCCAGTCTCTCCCCCATGAAGGC +
Preference number: 2 (lower is better)
Translates to: QEQVRNSRHEARVAL*AVFVDFIQSLPHEG
Trigger: GCCTTCATGGGGGAGAGACTGGATGAAATCTACAAAAACAGCCAAAAGTGCCACCCTGGCTTCATGTCTTGAATTTCTAACTTGCTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR TCA 90 bp ATTTACTGTCCCATTTCCTTCCGACACCACACTATCTTGAATTTAGGGAAAAGTGCAGAACATTCAGGCTaGCTGGTTCACCCACACCAG +
Preference number: 2 (lower is better)
Translates to: IYCPISFRHHTILNLGKSAEHSG*LVHPHQ
Trigger: CTGGTGTGGGTGAACCAGTCAGCCTGAATGTTCTGC...ACTTTTCCCTAAATTCAAGATAGTGTGGTGTCGGAAGGAAATGGGACAGTAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR TCA 90 bp AGGGATGTTAAGCCAGCTCATCAAAGGCCACGTAGTAAGGTAAAGGTGGAGCCCGGTTACTATCCATGGTaGAAAGAACTTTCTCTAGAA +
Preference number: 2 (lower is better)
Translates to: RDVKPAHQRPRSKVKVEPGYYPW*KELSLE
Trigger: TTCTAGAGAAAGTTCTTTTCACCATGGATAGTAACC...GGGCTCCACCTTTACCTTACTACGTGGCCTTTGATGAGCTGGCTTAACATCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR GCA 90 bp TCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTGAATCCGCTGTTCCTCCATCCTaGAGTTTAATTACAAGGAGC +
Preference number: 2 (lower is better)
Translates to: SQAVPPSCSLITRSKTESAVPPS*SLITRS
Trigger: GCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGC...GGATTCAGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
3UTR-3UTR GCA 90 bp AAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCCAAAATGGGCTCATaGTCATATCTCAGGCTGTTC +
Preference number: 2 (lower is better)
Translates to: KVTKGLPQNGLMLISQAVPKMGS*SYLRLF
Trigger: GAACAGCCTGAGATATGAGCATGAGCCCATTTTGGG...AACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
3UTR-3UTR GCA 90 bp ATTTACTGTCCCATTTCCTTCCGACACCACACTATCTTGAATTTAGGGAAAAGTCCATCCCACTTGCCCTaGTTGGGCCTTTTCAGCAGT +
Preference number: 2 (lower is better)
Translates to: IYCPISFRHHTILNLGKSPSHLP*LGLFSS
Trigger: ACTGCTGAAAAGGCCCAAGCAGGGCAAGTGGGATGG...ACTTTTCCCTAAATTCAAGATAGTGTGGTGTCGGAAGGAAATGGGACAGTAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CCA 90 bp CAGCAGCATCTCACTGCCTCACTAAACCTGCTGCCCAGTGAGATGAAAAGAAAAAGGTGGTTTTTCTCCTaGAAAAGTGGGATCAAAGTG +
Preference number: 2 (lower is better)
Translates to: QQHLTASLNLLPSEMKRKRWFFS*KSGIKV
Trigger: CACTTTGATCCCACTTTTCCAGGAGAAAAACCACCT...TTTTCTTTTCATCTCACTGGGCAGCAGGTTTAGTGAGGCAGTGAGATGCTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR TCA 90 bp GTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGCACAAAATCGTCTTCTaGAGCCAGCAGTACCGCGTT +
Preference number: 2 (lower is better)
Translates to: VIKVTKGLPQNGLMLISQHKIVF*SQQYRV
Trigger: AACGCGGTACTGCTGGCTTCAGAAGACGATTTTGTG...CTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372906.2
3UTR-3UTR GCA 90 bp GGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGCAGAGGTCTATACTTAGGCTTAAATTCTCCTTGTaGCTCTCCAAAGAAAAGAAG +
Preference number: 2 (lower is better)
Translates to: GAFISSKFPDEQQRSILRLKFSL*LSKEKK
Trigger: CTTCTTTTCTTTGGAGAGGCACAAGGAGAATTTAAG...CCTAAGTATAGACCTCTGCTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CCA 90 bp AGGGATGTTAAGCCAGCTCATCAAAGGCCACGTAGTAAGGTAAAGGTGGAGCCCGTCACACTGAAGGTTTaGCCAAATTATTTCATACAA +
Preference number: 2 (lower is better)
Translates to: RDVKPAHQRPRSKVKVEPVTLKV*PNYFIQ
Trigger: TTGTATGAAATAATTTGGCCAAACCTTCAGTGTGAC...GGGCTCCACCTTTACCTTACTACGTGGCCTTTGATGAGCTGGCTTAACATCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CCA 90 bp CATGGAGTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATAGGGGAGGATGCTTCTTaGAAGGTTTGTGTGGAGAGA +
Preference number: 2 (lower is better)
Translates to: HGVIKVTKGLPQNGLMLIGEDAS*KVCVER
Trigger: TCTCTCCACACAAACCTTCCAAGAAGCATCCTCCCC...TATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTACTCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372906.2
3UTR CAA 90 bp CCAAACAGGTGGTTTTTCTCCTGGAAAAGTGGGATCAAAGTGACTTaGGTCCTGATTGTTCTTGCTTCCAAGATGTGTAAGAACCAGATC +
Preference number: 2 (lower is better)
Translates to: PNRWFFSWKSGIKVT*VLIVLASKMCKNQI
Trigger: GATCTGGTTCTTACACATCTTGGAAGCAAGAACAATCAGGACCAAAGTCACTTTGATCCCACTTTTCCAGGAGAAAAACCACCTGTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR TCA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTAACATCAGGGCTGAGTaGTTCATTCCTCTTTACCCA +
Preference number: 2 (lower is better)
Translates to: QYREVLPELTSFLNSRHVNIRAE*FIPLYP
Trigger: TGGGTAAAGAGGAATGAATCACTCAGCCCTGATGTT...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR TCA 90 bp CAGCAGCATCTCACTGCCTCACTAAACCTGCTGCCCAGTGAGATGAAAAGAAAAAAAAATTCCCAGGATTaGTCTGAGGGTCAAATACTA +
Preference number: 2 (lower is better)
Translates to: QQHLTASLNLLPSEMKRKKNSQD*SEGQIL
Trigger: TAGTATTTGACCCTCAGATCAATCCTGGGAATTTTT...TTTTCTTTTCATCTCACTGGGCAGCAGGTTTAGTGAGGCAGTGAGATGCTGCTG
43% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR GCA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTAGCTGTGGCCATGCCTaGATTAAAACAAATGCGACT +
Preference number: 2 (lower is better)
Translates to: QYREVLPELTSFLNSRHVSCGHA*IKTNAT
Trigger: AGTCGCATTTGTTTTAATGCAGGCATGGCCACAGCT...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CCA 90 bp CCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATATGTTTAAGAATCAGTaGGGACATTTTCCATGTCTT +
Preference number: 2 (lower is better)
Translates to: PKAYPKMGSCSYLRLFLHMFKNQ*GHFPCL
Trigger: AAGACATGGAAAATGTCCCCACTGATTCTTAAACAT...ATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
3UTR CAA 90 bp ACACCACACTATCTTGAATTTAGGGAAAAGTTAATTTCCAAGTGTTaGTGCAATGGGCCAGAACTTCTCCCTGAAGGAACATACTCCCAG +
Preference number: 2 (lower is better)
Translates to: TPHYLEFREKLISKC*CNGPELLPEGTYSQ
Trigger: CTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGCCCATTGCACAAACACTTGGAAATTAACTTTTCCCTAAATTCAAGATAGTGTGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR TCA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTGTGCTGCTTATGTCCTaGTGCTTACATGATTCAGTT +
Preference number: 2 (lower is better)
Translates to: QYREVLPELTSFLNSRHVVLLMS*CLHDSV
Trigger: AACTGAATCATGTAAGCATCAGGACATAAGCAGCAC...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR TCA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTGAAAATTGGTGTCAGTaGGTCCCAGGAATACACATA +
Preference number: 2 (lower is better)
Translates to: QYREVLPELTSFLNSRHVENWCQ*VPGIHI
Trigger: TATGTGTATTCCTGGGACTCACTGACACCAATTTTC...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR TCA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTCACATTTGGTCACACTaGAGGTTTGGCCAAATTATT +
Preference number: 2 (lower is better)
Translates to: QYREVLPELTSFLNSRHVHIWSH*RFGQII
Trigger: AATAATTTGGCCAAACCTTCAGTGTGACCAAATGTG...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR TCA 90 bp ATTTACTGTCCCATTTCCTTCCGACACCACACTATCTTGAATTTAGGGAAAAGTGTCCCTTCTGGTCTTTaGGATAATTCTCTAGGAGAG +
Preference number: 2 (lower is better)
Translates to: IYCPISFRHHTILNLGKSVPSGL*DNSLGE
Trigger: CTCTCCTAGAGAATTATCTCAAAGACCAGAAGGGAC...ACTTTTCCCTAAATTCAAGATAGTGTGGTGTCGGAAGGAAATGGGACAGTAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR TCA 90 bp ATTTACTGTCCCATTTCCTTCCGACACCACACTATCTTGAATTTAGGGAAAAGTGGTGTCAAAACTATCTaGTACCTCTTCGGAGCCAAA +
Preference number: 2 (lower is better)
Translates to: IYCPISFRHHTILNLGKSGVKTI*YLFGAK
Trigger: TTTGGCTCCGAAGAGGTATCAGATAGTTTTGACACC...ACTTTTCCCTAAATTCAAGATAGTGTGGTGTCGGAAGGAAATGGGACAGTAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR GCA 90 bp AAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCTTAAATTCTCCTTGTaGCTCTCCAAAGAAAAGAAG +
Preference number: 2 (lower is better)
Translates to: KVTKGLPQNGLMLISQAVLKFSL*LSKEKK
Trigger: CTTCTTTTCTTTGGAGAGGCACAAGGAGAATTTAAG...AACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
3UTR-3UTR GCA 90 bp ACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCACTGGCCAAACAGCTGTTCCTCCATCCTaGAGTTTAATTACAAGGAGC +
Preference number: 2 (lower is better)
Translates to: TLKVWPNYFIQVVLTGQTAVPPS*SLITRS
Trigger: GCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGC...TGTTTGGCCAGTGAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR GCA 90 bp TCACATTTGGTCACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCCCCAAAATGGGCTCATaGTCATATCTCAGGCTGTTC +
Preference number: 2 (lower is better)
Translates to: SHLVTLKVWPNYFIQVVLPKMGS*SYLRLF
Trigger: GAACAGCCTGAGATATGAGCATGAGCCCATTTTGGG...GAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGTGACCAAATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR GCA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTCTCCAGATTAATAGTTaGAGACTGGGATTCCAAATG +
Preference number: 2 (lower is better)
Translates to: QYREVLPELTSFLNSRHVLQINS*RLGFQM
Trigger: CATTTGGAATCCCAGTCTGCAACTATTAATCTGGAG...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CCA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTTTTCTCCTGGAAAAGTaGGATCAAAGTGACTTTGGT +
Preference number: 2 (lower is better)
Translates to: QYREVLPELTSFLNSRHVFLLEK*DQSDFG
Trigger: ACCAAAGTCACTTTGATCCCACTTTTCCAGGAGAAA...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CCA 90 bp GTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGAGGTGGTTTTTCTCCTaGAAAAGTGGGATCAAAGTG +
Preference number: 2 (lower is better)
Translates to: VIKVTKGLPQNGLMLISQRWFFS*KSGIKV
Trigger: CACTTTGATCCCACTTTTCCAGGAGAAAAACCACCT...CTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR TCA 90 bp ATTTACTGTCCCATTTCCTTCCGACACCACACTATCTTGAATTTAGGGAAAAGTTACTTAGGGTTCCTGTaGAAAACACAAACTCCCAGT +
Preference number: 2 (lower is better)
Translates to: IYCPISFRHHTILNLGKSYLGFL*KTQTPS
Trigger: ACTGGGAGTTTGTGTTTTTCACAGGAACCCTAAGTA...ACTTTTCCCTAAATTCAAGATAGTGTGGTGTCGGAAGGAAATGGGACAGTAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR TCA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTTCCAGCATTTTAGGTTaGGTAAAATCATTTCCTGCT +
Preference number: 2 (lower is better)
Translates to: QYREVLPELTSFLNSRHVSSILG*VKSFPA
Trigger: AGCAGGAAATGATTTTACTCAACCTAAAATGCTGGA...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR TCA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTAAAAATTCCCAGGATTaGTCTGAGGGTCAAATACTA +
Preference number: 2 (lower is better)
Translates to: QYREVLPELTSFLNSRHVKNSQD*SEGQIL
Trigger: TAGTATTTGACCCTCAGATCAATCCTGGGAATTTTT...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CCA 90 bp ATTTACTGTCCCATTTCCTTCCGACACCACACTATCTTGAATTTAGGGAAAAGTCCAGAGTCTCAGGGATaGAAGGAATTCATCATACAA +
Preference number: 2 (lower is better)
Translates to: IYCPISFRHHTILNLGKSPESQG*KEFIIQ
Trigger: TTGTATGATGAATTCCTTCCATCCCTGAGACTCTGG...ACTTTTCCCTAAATTCAAGATAGTGTGGTGTCGGAAGGAAATGGGACAGTAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR CAA 90 bp ATAATAGTTTCTTTAAAGGCAGGGCTAATTGGTGACACATCTCTCTaGGAAAGACACATGTACCACAAACAAAAACAGGATCCAACCACT +
Preference number: 2 (lower is better)
Translates to: IIVSLKAGLIGDTSL*ERHMYHKQKQDPTT
Trigger: AGTGGTTGGATCCTGTTTTTGTTTGTGGTACATGTGTCTTTCCAAGAGAGATGTGTCACCAATTAGCCCTGCCTTTAAAGAAACTATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CCA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTGTCACACTGAAGGTTTaGCCAAATTATTTCATACAA +
Preference number: 2 (lower is better)
Translates to: QYREVLPELTSFLNSRHVVTLKV*PNYFIQ
Trigger: TTGTATGAAATAATTTGGCCAAACCTTCAGTGTGAC...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR CAA 90 bp ATTAGAAAGGAAATAGGTCAAAAACCATCATGTGAACCGTCTAATTaGATGTTTGGGCTAAGGCTAAAATCTTCACAGGGAGGTTCTAAA +
Preference number: 2 (lower is better)
Translates to: IRKEIGQKPSCEPSN*MFGLRLKSSQGGSK
Trigger: TTTAGAACCTCCCTGTGAAGATTTTAGCCTTAGCCCAAACATCAAATTAGACGGTTCACATGATGGTTTTTGACCTATTTCCTTTCTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR GCA 90 bp ATTTACTGTCCCATTTCCTTCCGACACCACACTATCTTGAATTTAGGGAAAAGTAACTTAAGTTTCTATTaGAAACTTCAACCAGTGGGT +
Preference number: 2 (lower is better)
Translates to: IYCPISFRHHTILNLGKSNLSFY*KLQPVG
Trigger: ACCCACTGGTTGAAGTTTGCAATAGAAACTTAAGTT...ACTTTTCCCTAAATTCAAGATAGTGTGGTGTCGGAAGGAAATGGGACAGTAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CCA 90 bp TCACATTTGGTCACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCATGTTTAAGAATCAGTaGGGACATTTTCCATGTCTT +
Preference number: 2 (lower is better)
Translates to: SHLVTLKVWPNYFIQVVLMFKNQ*GHFPCL
Trigger: AAGACATGGAAAATGTCCCCACTGATTCTTAAACAT...GAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGTGACCAAATGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR CCA 72 bp AATCGTCTTCTGAAGCCAGCAGTACCGCGTTCCAGGTaGCAGTGTCCAGCTCCCCAGCCGTGCCCCCATACT +
Preference number: 3 (lower is better)
Translates to: NRLLKPAVPRSR*QCPAPQPCPHT
Trigger: AGTATGGGGGCACGGCTGGGGAGCTGGACACTGCCACCTGGAACGCGGTACTGCTGGCTTCAGAAGACGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372906.2
3UTR TCA 72 bp CCCTGGCTGGTCATTCCCCACCCTGCTGAGACAGCCTaGCACAAACATCCTGGTGAAGCCACAAGGAGACCA +
Preference number: 3 (lower is better)
Translates to: PWLVIPHPAETA*HKHPGEATRRP
Trigger: TGGTCTCCTTGTGGCTTCACCAGGATGTTTGTGTCAGGCTGTCTCAGCAGGGTGGGGAATGACCAGCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR TCA 72 bp TTCATGGGTTTGCCTCACCAGTGCGCTCCCCAGTGCTaGGTAAGGCTCACTGTGCTCCCTGGCTGGTCATTC +
Preference number: 3 (lower is better)
Translates to: FMGLPHQCAPQC*VRLTVLPGWSF
Trigger: GAATGACCAGCCAGGGAGCACAGTGAGCCTTACTCAGCACTGGGGAGCGCACTGGTGAGGCAAACCCATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR TCA 72 bp CAGAACTTCTCCCTGAAGGAACATACTCCCAGTTCTTaGGGTTCATGGGTTTGCCTCACCAGTGCGCTCCCC +
Preference number: 3 (lower is better)
Translates to: QNFSLKEHTPSS*GSWVCLTSALP
Trigger: GGGGAGCGCACTGGTGAGGCAAACCCATGAACCTCAAGAACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CAA 90 bp GGAAAAGAATTAAAGATGGTGACCCTGGGGGACGGGCTAGTAGCAGGAGTACAGTGGGGAGGATGCTTCTaGGAAGGTTTGTGTGGAGAG +
Preference number: 3 (lower is better)
Translates to: GKELKMVTLGDGLVAGVQWGGCF*EGLCGE
Trigger: CTCTCCACACAAACCTTCCAAGAAGCATCCTCCCCA...CTGTACTCCTGCTACTAGCCCGTCCCCCAGGGTCACCATCTTTAATTCTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372906.2
3UTR-3UTR CAA 90 bp GGGCCAGAACTTCTCCCTGAAGGAACATACTCCCAGTTCTTGAGGTTCATGGGTCTCCGGCTTCCACATTaGACCACAAAGTGCTGCTTA +
Preference number: 3 (lower is better)
Translates to: GPELLPEGTYSQFLRFMGLRLPH*TTKCCL
Trigger: TAAGCAGCACTTTGTGGTCAAATGTGGAAGCCGGAG...ACCCATGAACCTCAAGAACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CAA 90 bp AACCCGGTGACAACAGCTGGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGGGGATCAAAGTGACTTaGGTCCTGATTGTTCTTGCT +
Preference number: 3 (lower is better)
Translates to: NPVTTAGAFISSKFPDEQGIKVT*VLIVLA
Trigger: AGCAAGAACAATCAGGACCAAAGTCACTTTGATCCC...CTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCCAGCTGTTGTCACCGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CAA 90 bp GGGCCAGAACTTCTCCCTGAAGGAACATACTCCCAGTTCTTGAGGTTCATGGGTGGTGACACATCTCTCTaGGAAAGACACATGTACCAC +
Preference number: 3 (lower is better)
Translates to: GPELLPEGTYSQFLRFMGGDTSL*ERHMYH
Trigger: GTGGTACATGTGTCTTTCCAAGAGAGATGTGTCACC...ACCCATGAACCTCAAGAACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR TCA 72 bp ATTGCAAACTTCAACCAGTGGGTCCCAGAGGTGCTTTaGAGTCTCCGGCTTCCACATTTGACCACAAAGTGC +
Preference number: 3 (lower is better)
Translates to: IANFNQWVPEVL*SLRLPHLTTKC
Trigger: GCACTTTGTGGTCAAATGTGGAAGCCGGAGACTTCAAAGCACCTCTGGGACCCACTGGTTGAAGTTTGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR TCA 72 bp CACAAACATCCTGGTGAAGCCACAAGGAGACCACCTTaGTTTTCACGCAGGGAGGTCTTGGTTTCACAGCTT +
Preference number: 3 (lower is better)
Translates to: HKHPGEATRRPP*FSRREVLVSQL
Trigger: AAGCTGTGAAACCAAGACCTCCCTGCGTGAAAATCAAGGTGGTCTCCTTGTGGCTTCACCAGGATGTTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CAA 90 bp AACCCGGTGACAACAGCTGGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGACCCTTAAATTCTCCTaGTGCCTCTCCAAAGAAAAG +
Preference number: 3 (lower is better)
Translates to: NPVTTAGAFISSKFPDEQTLKFS*CLSKEK
Trigger: CTTTTCTTTGGAGAGGCACAAGGAGAATTTAAGGGT...CTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCCAGCTGTTGTCACCGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CAA 90 bp GGGCCAGAACTTCTCCCTGAAGGAACATACTCCCAGTTCTTGAGGTTCATGGGTGAAACCACTCCTTCCTaGTCCAACTGGAAAAACCTA +
Preference number: 3 (lower is better)
Translates to: GPELLPEGTYSQFLRFMGETTPS*SNWKNL
Trigger: TAGGTTTTTCCAGTTGGACAAGGAAGGAGTGGTTTC...ACCCATGAACCTCAAGAACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR TCA 72 bp TCCCAGAGGTGCTTTGAAGTCTCCGGCTTCCACATTTaGCCACAAAGTGCTGCTTATGTCCTGATGCTTACA +
Preference number: 3 (lower is better)
Translates to: SQRCFEVSGFHI*PQSAAYVLMLT
Trigger: TGTAAGCATCAGGACATAAGCAGCACTTTGTGGTCAAATGTGGAAGCCGGAGACTTCAAAGCACCTCTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR TCA 72 bp TTCCAAGTGTTTGTGCAATGGGCCAGAACTTCTCCCTaGAGGAACATACTCCCAGTTCTTGAGGTTCATGGG +
Preference number: 3 (lower is better)
Translates to: FQVFVQWARTSP*RNILPVLEVHG
Trigger: CCCATGAACCTCAAGAACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGCCCATTGCACAAACACTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR GCA 72 bp TGCTTATGTCCTGATGCTTACATGATTCAGTTAAGGTaGTTTCCAAACCCGGTGACAACAGCTGGGGCCTTC +
Preference number: 3 (lower is better)
Translates to: CLCPDAYMIQLR*FPNPVTTAGAF
Trigger: GAAGGCCCCAGCTGTTGTCACCGGGTTTGGAAAGCACCTTAACTGAATCATGTAAGCATCAGGACATAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CAA 90 bp GGGCCAGAACTTCTCCCTGAAGGAACATACTCCCAGTTCTTGAGGTTCATGGGTACCCTTAAATTCTCCTaGTGCCTCTCCAAAGAAAAG +
Preference number: 3 (lower is better)
Translates to: GPELLPEGTYSQFLRFMGTLKFS*CLSKEK
Trigger: CTTTTCTTTGGAGAGGCACAAGGAGAATTTAAGGGT...ACCCATGAACCTCAAGAACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CAA 90 bp CAGCAGCATCTCACTGCCTCACTAAACCTGCTGCCCAGTGAGATGAAAAGAAAAAGGAATAACCTGCCCTaGTGTTCATTTCCAGAGACC +
Preference number: 3 (lower is better)
Translates to: QQHLTASLNLLPSEMKRKRNNLP*CSFPET
Trigger: GGTCTCTGGAAATGAACACAAGGGCAGGTTATTCCT...TTTTCTTTTCATCTCACTGGGCAGCAGGTTTAGTGAGGCAGTGAGATGCTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CAA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTTCACGCAGGGAGGTCTaGGTTTCACAGCTTGGTTCA +
Preference number: 3 (lower is better)
Translates to: QYREVLPELTSFLNSRHVSRREV*VSQLGS
Trigger: TGAACCAAGCTGTGAAACCAAGACCTCCCTGCGTGA...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CAA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTCTCCCAGTCTCACATTaGGTCACACTGAAGGTTTGG +
Preference number: 3 (lower is better)
Translates to: QYREVLPELTSFLNSRHVLPVSH*VTLKVW
Trigger: CCAAACCTTCAGTGTGACCAAATGTGAGACTGGGAG...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CAA 90 bp AGGGATGTTAAGCCAGCTCATCAAAGGCCACGTAGTAAGGTAAAGGTGGAGCCCAAACTTAAGTTTCTATaGCAAACTTCAACCAGTGGG +
Preference number: 3 (lower is better)
Translates to: RDVKPAHQRPRSKVKVEPKLKFL*QTSTSG
Trigger: CCCACTGGTTGAAGTTTGCAATAGAAACTTAAGTTT...GGGCTCCACCTTTACCTTACTACGTGGCCTTTGATGAGCTGGCTTAACATCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CAA 90 bp CAGCAGCATCTCACTGCCTCACTAAACCTGCTGCCCAGTGAGATGAAAAGAAAATGTGAACCGTCTAATTaGATGTTTGGGCTAAGGCTA +
Preference number: 3 (lower is better)
Translates to: QQHLTASLNLLPSEMKRKCEPSN*MFGLRL
Trigger: TAGCCTTAGCCCAAACATCAAATTAGACGGTTCACA...TTTTCTTTTCATCTCACTGGGCAGCAGGTTTAGTGAGGCAGTGAGATGCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR TCA 72 bp CTGATGAGCAGCAGAGGTCTATACTTAGGGTTCCTGTaGAAAACACAAACTCCCAGTCTCACATTTGGTCAC +
Preference number: 3 (lower is better)
Translates to: LMSSRGLYLGFL*KTQTPSLTFGH
Trigger: GTGACCAAATGTGAGACTGGGAGTTTGTGTTTTTCACAGGAACCCTAAGTATAGACCTCTGCTGCTCATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR TCA 72 bp AAATCCCAGAGCCTCAGCAGCCAAAATGGCCCTAGCTaGCATTTCATCCAGCCTCATTTTATAGAGGAGAAA +
Preference number: 3 (lower is better)
Translates to: KSQSLSSQNGPS*HFIQPHFIEEK
Trigger: TTTCTCCTCTATAAAATGAGGCTGGATGAAATGTCAGCTAGGGCCATTTTGGCTGCTGAGGCTCTGGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CAA 90 bp CAGCAGCATCTCACTGCCTCACTAAACCTGCTGCCCAGTGAGATGAAAAGAAAAGGTCACACTGAAGGTTaGGCCAAATTATTTCATACA +
Preference number: 3 (lower is better)
Translates to: QQHLTASLNLLPSEMKRKGHTEG*AKLFHT
Trigger: TGTATGAAATAATTTGGCCAAACCTTCAGTGTGACC...TTTTCTTTTCATCTCACTGGGCAGCAGGTTTAGTGAGGCAGTGAGATGCTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CAA 90 bp ATTTACTGTCCCATTTCCTTCCGACACCACACTATCTTGAATTTAGGGAAAAGTCACAAGGAGACCACCTaGATTTTCACGCAGGGAGGT +
Preference number: 3 (lower is better)
Translates to: IYCPISFRHHTILNLGKSHKETT*IFTQGG
Trigger: ACCTCCCTGCGTGAAAATCAAGGTGGTCTCCTTGTG...ACTTTTCCCTAAATTCAAGATAGTGTGGTGTCGGAAGGAAATGGGACAGTAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR TCA 72 bp CAGAGTATTGTTTTCTCCCTAACTGAGCTGTCTGCTTaGCTGGTTAGTCTAATAAATGCACGGAGAAGGTGC +
Preference number: 3 (lower is better)
Translates to: QSIVFSLTELSA*LVSLINARRRC
Trigger: GCACCTTCTCCGTGCATTTATTAGACTAACCAGTCAAGCAGACAGCTCAGTTAGGGAGAAAACAATACTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CAA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTGAAACCACTCCTTCCTaGTCCAACTGGAAAAACCTA +
Preference number: 3 (lower is better)
Translates to: QYREVLPELTSFLNSRHVETTPS*SNWKNL
Trigger: TAGGTTTTTCCAGTTGGACAAGGAAGGAGTGGTTTC...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR CCA 72 bp AGCCAGGTTTACAATATAGTACCAGAGTCTCAGGGATaGAAGGAATTCATCATACAAGATCCTGGTCACCTT +
Preference number: 3 (lower is better)
Translates to: SQVYNIVPESQG*KEFIIQDPGHL
Trigger: AAGGTGACCAGGATCTTGTATGATGAATTCCTTCCATCCCTGAGACTCTGGTACTATATTGTAAACCTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CAA 90 bp ATTTACTGTCCCATTTCCTTCCGACACCACACTATCTTGAATTTAGGGAAAAGTGGTGACACATCTCTCTaGGAAAGACACATGTACCAC +
Preference number: 3 (lower is better)
Translates to: IYCPISFRHHTILNLGKSGDTSL*ERHMYH
Trigger: GTGGTACATGTGTCTTTCCAAGAGAGATGTGTCACC...ACTTTTCCCTAAATTCAAGATAGTGTGGTGTCGGAAGGAAATGGGACAGTAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR TCA 72 bp GCTTCCACATTTGACCACAAAGTGCTGCTTATGTCCTaGTGCTTACATGATTCAGTTAAGGTGCTTTCCAAA +
Preference number: 3 (lower is better)
Translates to: ASTFDHKVLLMS*CLHDSVKVLSK
Trigger: TTTGGAAAGCACCTTAACTGAATCATGTAAGCATCAGGACATAAGCAGCACTTTGTGGTCAAATGTGGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CAA 90 bp CATGGAGTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATAACCCTTAAATTCTCCTaGTGCCTCTCCAAAGAAAAG +
Preference number: 3 (lower is better)
Translates to: HGVIKVTKGLPQNGLMLITLKFS*CLSKEK
Trigger: CTTTTCTTTGGAGAGGCACAAGGAGAATTTAAGGGT...TATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTACTCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
3UTR-3UTR CAA 90 bp ACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCACTGGCCAAACAGGGATCAAAGTGACTTaGGTCCTGATTGTTCTTGCT +
Preference number: 3 (lower is better)
Translates to: TLKVWPNYFIQVVLTGQTGIKVT*VLIVLA
Trigger: AGCAAGAACAATCAGGACCAAAGTCACTTTGATCCC...TGTTTGGCCAGTGAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CAA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTGGTCACACTGAAGGTTaGGCCAAATTATTTCATACA +
Preference number: 3 (lower is better)
Translates to: QYREVLPELTSFLNSRHVGHTEG*AKLFHT
Trigger: TGTATGAAATAATTTGGCCAAACCTTCAGTGTGACC...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR GCA 72 bp CTTGAATTTAGGGAAAAGTTAATTTCCAAGTGTTTGTaGAATGGGCCAGAACTTCTCCCTGAAGGAACATAC +
Preference number: 3 (lower is better)
Translates to: LEFREKLISKCL*NGPELLPEGTY
Trigger: GTATGTTCCTTCAGGGAGAAGTTCTGGCCCATTGCACAAACACTTGGAAATTAACTTTTCCCTAAATTCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR TCA 72 bp ACACATAATAGTTTCTTTAAAGGCAGGGCTAATTGGTaGCACATCTCTCTTGGAAAGACACATGTACCACAA +
Preference number: 3 (lower is better)
Translates to: THNSFFKGRANW*HISLGKTHVPQ
Trigger: TTGTGGTACATGTGTCTTTCCAAGAGAGATGTGTCACCAATTAGCCCTGCCTTTAAAGAAACTATTATGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR-3UTR CAA 90 bp ATTTACTGTCCCATTTCCTTCCGACACCACACTATCTTGAATTTAGGGAAAAGTACAGGATCCAACCACTaGTATCTAGATAGTTATCTT +
Preference number: 3 (lower is better)
Translates to: IYCPISFRHHTILNLGKSTGSNH*YLDSYL
Trigger: AAGATAACTATCTAGATACAAGTGGTTGGATCCTGT...ACTTTTCCCTAAATTCAAGATAGTGTGGTGTCGGAAGGAAATGGGACAGTAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR CCA 72 bp AAAATAGATATAGCCTCCAGATTAATAGTTGCAGACTaGGATTCCAAATGTTTAAGAATCAGTGGGGACATT +
Preference number: 3 (lower is better)
Translates to: KIDIASRLIVAD*DSKCLRISGDI
Trigger: AATGTCCCCACTGATTCTTAAACATTTGGAATCCCAGTCTGCAACTATTAATCTGGAGGCTATATCTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR CCA 90 bp CGTCTTCTGAAGCCAGCAGTACCGCGTTCCAGGTGGCAGTGTCCAGCTCCCCAGCGGATGCAGACGACATaGCAGCCCCTGGGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: RLLKPAVPRSRWQCPAPQRMQTT*QPLGSV
Trigger: CACTGACCCCAGGGGCTGCCATGTCGTCTGCATCCG...CTGGGGAGCTGGACACTGCCACCTGGAACGCGGTACTGCTGGCTTCAGAAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372906.2
CDS-3UTR GCA 90 bp AGCTGTGACTTCACAGCTCGCAAGGAGTCGTCACACTGTGCATCTGAGGTCAGGAGCTACCAAGGTCCCTaGCAACAGAGAAGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: SCDFTARKESSHCASEVRSYQGP*QQRSPA
Trigger: GGCCGGGCTTCTCTGTTGGCAGGGACCTTGGTAGCT...CCTGACCTCAGATGCACAGTGTGACGACTCCTTGCGAGCTGTGAAGTCACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372906.2
CDS-3UTR CCA 90 bp GGGCCAGAACTTCTCCCTGAAGGAACATACTCCCAGTTCTTGAGGTTCATGGGTCGACATGGCAGCCCCTaGGGTCAGTGTGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GPELLPEGTYSQFLRFMGRHGSP*GQCGAA
Trigger: TGCTGCCCCACACTGACCCCAGGGGCTGCCATGTCG...ACCCATGAACCTCAAGAACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp GGAAAAGAATTAAAGATGGTGACCCTGGGGGACGGGCTAGTAGCAGGAGTACAGCGACATGGCAGCCCCTaGGGTCAGTGTGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GKELKMVTLGDGLVAGVQRHGSP*GQCGAA
Trigger: TGCTGCCCCACACTGACCCCAGGGGCTGCCATGTCG...CTGTACTCCTGCTACTAGCCCGTCCCCCAGGGTCACCATCTTTAATTCTTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000372906.2
CDS-3UTR TCA 90 bp TCACAAAATCGTCTTCTGAAGCCAGCAGTACCGCGTTCCAGGTGGCAGTGTCCATACAGCTGTGGTAGTTaGCGAGGAGCTGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: SQNRLLKPAVPRSRWQCPYSCGS*RGAAGP
Trigger: GGGCCCTGCAGCTCCTCGTCAACTACCACAGCTGTA...TGGACACTGCCACCTGGAACGCGGTACTGCTGGCTTCAGAAGACGATTTTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372906.2
CDS-3UTR TCA 90 bp AGGGATGTTAAGCCAGCTCATCAAAGGCCACGTAGTAAGGTAAAGGTGGAGCCCCAGGCCAGTGGGTTCTaGACCCCCTCCTTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: RDVKPAHQRPRSKVKVEPQASGF*TPSFPP
Trigger: AGGAGGGAAGGAGGGGGTTCAGAACCCACTGGCCTG...GGGCTCCACCTTTACCTTACTACGTGGCCTTTGATGAGCTGGCTTAACATCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp AACCCGGTGACAACAGCTGGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGACTCCGGACTTCAGGTaGTACACCCACCTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: NPVTTAGAFISSKFPDEQTPDFR*YTHLSR
Trigger: GCGGCTGAGGTGGGTGTATCACCTGAAGTCCGGAGT...CTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCCAGCTGTTGTCACCGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp GCCAGGAGTGCTTTTTGGCACTTCCAGCTCAGCCAGTACCGTAGAGGATCCAGGAATGTGACCAGTGGCTaGAACAGTGCCCCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: ARSAFWHFQLSQYRRGSRNVTSG*NSAPSW
Trigger: CCAGCTTGGGGCACTGTTTCAGCCACTGGTCACATT...CCTGGATCCTCTACGGTACTGGCTGAGCTGGAAGTGCCAAAAAGCACTCCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp GCCAGGAGTGCTTTTTGGCACTTCCAGCTCAGCCAGTACCGTAGAGGATCCAGGCATCGTCGAGGGATGTaGTCAGGTTGGGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: ARSAFWHFQLSQYRRGSRHRRGM*SGWGTP
Trigger: AGGAGTACCCCAACCTGAGCACATCCCTCGACGATG...CCTGGATCCTCTACGGTACTGGCTGAGCTGGAAGTGCCAAAAAGCACTCCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp GCCAGGAGTGCTTTTTGGCACTTCCAGCTCAGCCAGTACCGTAGAGGATCCAGGAGTGGGTCCCAGAGGTaGTTTGAAGTCTCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: ARSAFWHFQLSQYRRGSRSGSQR*FEVSGF
Trigger: GAAGCCGGAGACTTCAAAGCACCTCTGGGACCCACT...CCTGGATCCTCTACGGTACTGGCTGAGCTGGAAGTGCCAAAAAGCACTCCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp AACCCGGTGACAACAGCTGGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGTCACCCAGGCTGGAGTaGAATGGCGCGATGTCGGCT +
Preference number: 4 (lower is better)
Translates to: NPVTTAGAFISSKFPDEQSPRLE*NGAMSA
Trigger: AGCCGACATCGCGCCATTGCACTCCAGCCTGGGTGA...CTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCCAGCTGTTGTCACCGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp AGGGATGTTAAGCCAGCTCATCAAAGGCCACGTAGTAAGGTAAAGGTGGAGCCCTCGGGCAGCAGCGTCTaGCCCAGGATGCTGTCACAG +
Preference number: 4 (lower is better)
Translates to: RDVKPAHQRPRSKVKVEPSGSSV*PRMLSQ
Trigger: CTGTGACAGCATCCTGGGCCAGACGCTGCTGCCCGA...GGGCTCCACCTTTACCTTACTACGTGGCCTTTGATGAGCTGGCTTAACATCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp GCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCCTGCATCGGGCAGCAGCGTCTaGCCCAGGATGCTGTCACAG +
Preference number: 4 (lower is better)
Translates to: AYPKMGSCSYLRLFLHPASGSSV*PRMLSQ
Trigger: CTGTGACAGCATCCTGGGCCAGACGCTGCTGCCCGA...TGCAGGATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR CCA 90 bp AACCCGGTGACAACAGCTGGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGGCTCACTGTGCTCCCTaGCTGGTCATTCCCCACCCT +
Preference number: 4 (lower is better)
Translates to: NPVTTAGAFISSKFPDEQAHCAP*LVIPHP
Trigger: AGGGTGGGGAATGACCAGCCAGGGAGCACAGTGAGC...CTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCCAGCTGTTGTCACCGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp ACAGCTGTGACTTCACAGCTCGCAAGGAGTCGTCACACTGTGCATCTGAGGTCACAGGTCTTCTGTCAGTaGGCACACATAGCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: TAVTSQLARSRHTVHLRSQVFCQ*AHIARR
Trigger: CCTCCGGGCTATGTGTGCTCACTGACAGAAGACCTG...TGACCTCAGATGCACAGTGTGACGACTCCTTGCGAGCTGTGAAGTCACAGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372906.2
CDS-3UTR TCA 90 bp CCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATTGTGGGGCAGCACGGTaGGGAACCCGGAAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: PKAYPKMGSCSYLRLFLHCGAAR*GTRKQG
Trigger: TCCTTGCTTCCGGGTTCCTCACCGTGCTGCCCCACA...ATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR TCA 90 bp AACCCGGTGACAACAGCTGGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGCCAGTCTCTCCCCCATaGAGGCAGAACAGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: NPVTTAGAFISSKFPDEQPVSPP*RQNRGR
Trigger: TCTTCCCCTGTTCTGCCTTCATGGGGGAGAGACTGG...CTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCCAGCTGTTGTCACCGGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp CCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATGTACCGCGTTCCAGGTaGCAGTGTCCAGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: PKAYPKMGSCSYLRLFLHVPRSR*QCPAPQ
Trigger: CTGGGGAGCTGGACACTGCCACCTGGAACGCGGTAC...ATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR CCA 90 bp AGGGATGTTAAGCCAGCTCATCAAAGGCCACGTAGTAAGGTAAAGGTGGAGCCCGCTCACTGTGCTCCCTaGCTGGTCATTCCCCACCCT +
Preference number: 4 (lower is better)
Translates to: RDVKPAHQRPRSKVKVEPAHCAP*LVIPHP
Trigger: AGGGTGGGGAATGACCAGCCAGGGAGCACAGTGAGC...GGGCTCCACCTTTACCTTACTACGTGGCCTTTGATGAGCTGGCTTAACATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp CAGCAGCATCTCACTGCCTCACTAAACCTGCTGCCCAGTGAGATGAAAAGAAAATGTGGGGCAGCACGGTaGGGAACCCGGAAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: QQHLTASLNLLPSEMKRKCGAAR*GTRKQG
Trigger: TCCTTGCTTCCGGGTTCCTCACCGTGCTGCCCCACA...TTTTCTTTTCATCTCACTGGGCAGCAGGTTTAGTGAGGCAGTGAGATGCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp GCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCCTGCAGCTTTCCAAACCCGGTaGCAACAGCTGGGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: AYPKMGSCSYLRLFLHPAAFQTR*QQLGPS
Trigger: TGAAGGCCCCAGCTGTTGTCACCGGGTTTGGAAAGC...TGCAGGATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp GCCAGGAGTGCTTTTTGGCACTTCCAGCTCAGCCAGTACCGTAGAGGATCCAGGGGCAGGGCTAATTGGTaGCACATCTCTCTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: ARSAFWHFQLSQYRRGSRGRANW*HISLGK
Trigger: CTTTCCAAGAGAGATGTGTCACCAATTAGCCCTGCC...CCTGGATCCTCTACGGTACTGGCTGAGCTGGAAGTGCCAAAAAGCACTCCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp GGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGCAGAGGTCTATACTTAGGTGCGCTCCCCAGTGCTaGGTAAGGCTCACTGTGCTC +
Preference number: 4 (lower is better)
Translates to: GAFISSKFPDEQQRSILRCAPQC*VRLTVL
Trigger: GAGCACAGTGAGCCTTACTCAGCACTGGGGAGCGCA...CCTAAGTATAGACCTCTGCTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp AGGGATGTTAAGCCAGCTCATCAAAGGCCACGTAGTAAGGTAAAGGTGGAGCCCCCAGTCTCTCCCCCATaGAGGCAGAACAGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: RDVKPAHQRPRSKVKVEPPVSPP*RQNRGR
Trigger: TCTTCCCCTGTTCTGCCTTCATGGGGGAGAGACTGG...GGGCTCCACCTTTACCTTACTACGTGGCCTTTGATGAGCTGGCTTAACATCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp CAGCAGCATCTCACTGCCTCACTAAACCTGCTGCCCAGTGAGATGAAAAGAAAAGTACCGCGTTCCAGGTaGCAGTGTCCAGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: QQHLTASLNLLPSEMKRKVPRSR*QCPAPQ
Trigger: CTGGGGAGCTGGACACTGCCACCTGGAACGCGGTAC...TTTTCTTTTCATCTCACTGGGCAGCAGGTTTAGTGAGGCAGTGAGATGCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp GGGCCAGAACTTCTCCCTGAAGGAACATACTCCCAGTTCTTGAGGTTCATGGGTTCCCATCCAGGCCAGTaGGTTCTGAACCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GPELLPEGTYSQFLRFMGSHPGQ*VLNPLL
Trigger: AAGGAGGGGGTTCAGAACCCACTGGCCTGGATGGGA...ACCCATGAACCTCAAGAACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp CCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCAGGTCTTCTGTCAGTaGGCACACATAGCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: PKAYPKMGSCSYLRLFLHQVFCQ*AHIARR
Trigger: CCTCCGGGCTATGTGTGCTCACTGACAGAAGACCTG...ATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR TCA 90 bp TCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTGAATCCGTCACACTGTGCATCTaGGGTCAGGCCCTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: SQAVPPSCSLITRSKTESVTLCI*GQALGQ
Trigger: CTGCCCGAGGGCCTGACCTCAGATGCACAGTGTGAC...GGATTCAGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR TCA 90 bp GCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCCTGCAGTCCCAGAGGTGCTTTaGAGTCTCCGGCTTCCACAT +
Preference number: 4 (lower is better)
Translates to: AYPKMGSCSYLRLFLHPAVPEVL*SLRLPH
Trigger: ATGTGGAAGCCGGAGACTTCAAAGCACCTCTGGGAC...TGCAGGATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp GCCAGGAGTGCTTTTTGGCACTTCCAGCTCAGCCAGTACCGTAGAGGATCCAGGCTTCTAGAAGCTGAGTaGAACCACTCCTTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: ARSAFWHFQLSQYRRGSRLLEAE*NHSFLV
Trigger: GACAAGGAAGGAGTGGTTTCACTCAGCTTCTAGAAG...CCTGGATCCTCTACGGTACTGGCTGAGCTGGAAGTGCCAAAAAGCACTCCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp GCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCCTGCACATTCCGGCTTTTCCTaGAGCTCTTCCCGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: AYPKMGSCSYLRLFLHPAHSGFS*SSSRAL
Trigger: CAAAGCCCGGGAAGAGCTGCAGGAAAAGCCGGAATG...TGCAGGATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR CCA 90 bp AGCTGTGACTTCACAGCTCGCAAGGAGTCGTCACACTGTGCATCTGAGGTCAGGGGGGAGGATGCTTCTTaGAAGGTTTGTGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: SCDFTARKESSHCASEVRGEDAS*KVCVER
Trigger: TCTCTCCACACAAACCTTCCAAGAAGCATCCTCCCC...CCTGACCTCAGATGCACAGTGTGACGACTCCTTGCGAGCTGTGAAGTCACAGCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000372906.2
CDS-3UTR CCA 90 bp CAGCAGCATCTCACTGCCTCACTAAACCTGCTGCCCAGTGAGATGAAAAGAAAACAGGCTGGAGTGCAATaGCGCGATGTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: QQHLTASLNLLPSEMKRKQAGVQ*RDVGSL
Trigger: CAGTGAGCCGACATCGCGCCATTGCACTCCAGCCTG...TTTTCTTTTCATCTCACTGGGCAGCAGGTTTAGTGAGGCAGTGAGATGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp GCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCCTGCACTCATTTTCAGAGAGTaGGGCCACAGAAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: AYPKMGSCSYLRLFLHPALIFRE*GHRRAG
Trigger: ACCAGCCCTTCTGTGGCCTCACTCTCTGAAAATGAG...TGCAGGATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR TCA 90 bp CAGCAGCATCTCACTGCCTCACTAAACCTGCTGCCCAGTGAGATGAAAAGAAAACAGGTCTTCTGTCAGTaGGCACACATAGCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: QQHLTASLNLLPSEMKRKQVFCQ*AHIARR
Trigger: CCTCCGGGCTATGTGTGCTCACTGACAGAAGACCTG...TTTTCTTTTCATCTCACTGGGCAGCAGGTTTAGTGAGGCAGTGAGATGCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp AAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTGTCACACTGTGCATCTaGGGTCAGGCCCTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: KVTKGLPQNGLMLISQAVVTLCI*GQALGQ
Trigger: CTGCCCGAGGGCCTGACCTCAGATGCACAGTGTGAC...AACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR TCA 90 bp GGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGCAGAGGTCTATACTTAGGGCAGAACATTCAGGCTaGCTGGTTCACCCACACCAG +
Preference number: 4 (lower is better)
Translates to: GAFISSKFPDEQQRSILRAEHSG*LVHPHQ
Trigger: CTGGTGTGGGTGAACCAGTCAGCCTGAATGTTCTGC...CCTAAGTATAGACCTCTGCTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp GCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCCTGCAACACAAACATCCTGGTaGAGCCACAAGGAGACCACC +
Preference number: 4 (lower is better)
Translates to: AYPKMGSCSYLRLFLHPATQTSW*SHKETT
Trigger: GGTGGTCTCCTTGTGGCTTCACCAGGATGTTTGTGT...TGCAGGATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp AACCCGGTGACAACAGCTGGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGCATACTCCCAGTTCTTaGGGTTCATGGGTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: NPVTTAGAFISSKFPDEQHTPSS*GSWVCL
Trigger: GAGGCAAACCCATGAACCTCAAGAACTGGGAGTATG...CTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCCAGCTGTTGTCACCGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp AACCCGGTGACAACAGCTGGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGGCCAGAACTTCTCCCTaGAGGAACATACTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: NPVTTAGAFISSKFPDEQARTSP*RNILPV
Trigger: AACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGC...CTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCCAGCTGTTGTCACCGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp CCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATGGTCGTAATCAAACTTaGGGGCTCGGAGGAAGCGCA +
Preference number: 4 (lower is better)
Translates to: PKAYPKMGSCSYLRLFLHGRNQT*GLGGSA
Trigger: TGCGCTTCCTCCGAGCCCGCAAGTTTGATTACGACC...ATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR GCA 90 bp AAAGATGGTGACCCTGGGGGACGGGCTAGTAGCAGGAGTACAGCTGTGACTTCACCCAAAATGGGCTCATaGTCATATCTCAGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: KDGDPGGRASSRSTAVTSPKMGS*SYLRLF
Trigger: GAACAGCCTGAGATATGAGCATGAGCCCATTTTGGG...TGAAGTCACAGCTGTACTCCTGCTACTAGCCCGTCCCCCAGGGTCACCATCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372906.2
CDS-3UTR GCA 90 bp GGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGCAGAGGTCTATACTTAGGCCATCCCACTTGCCCTaGTTGGGCCTTTTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: GAFISSKFPDEQQRSILRPSHLP*LGLFSS
Trigger: ACTGCTGAAAAGGCCCAAGCAGGGCAAGTGGGATGG...CCTAAGTATAGACCTCTGCTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp GCCAGGAGTGCTTTTTGGCACTTCCAGCTCAGCCAGTACCGTAGAGGATCCAGGGCGACTGGCCAGGAATaGAGTGTAGAATTGAAACAT +
Preference number: 4 (lower is better)
Translates to: ARSAFWHFQLSQYRRGSRATGQE*SVELKH
Trigger: ATGTTTCAATTCTACACTGCATTCCTGGCCAGTCGC...CCTGGATCCTCTACGGTACTGGCTGAGCTGGAAGTGCCAAAAAGCACTCCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp GCCAGGAGTGCTTTTTGGCACTTCCAGCTCAGCCAGTACCGTAGAGGATCCAGGAGCTGTGGCCATGCCTaGATTAAAACAAATGCGACT +
Preference number: 4 (lower is better)
Translates to: ARSAFWHFQLSQYRRGSRSCGHA*IKTNAT
Trigger: AGTCGCATTTGTTTTAATGCAGGCATGGCCACAGCT...CCTGGATCCTCTACGGTACTGGCTGAGCTGGAAGTGCCAAAAAGCACTCCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp TCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTGAATCCTCACCCAGGCTGGAGTaGAATGGCGCGATGTCGGCT +
Preference number: 4 (lower is better)
Translates to: SQAVPPSCSLITRSKTESSPRLE*NGAMSA
Trigger: AGCCGACATCGCGCCATTGCACTCCAGCCTGGGTGA...GGATTCAGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp GGGCCAGAACTTCTCCCTGAAGGAACATACTCCCAGTTCTTGAGGTTCATGGGTCAGGGCATGAACTACTaGACCTGGCCAAGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: GPELLPEGTYSQFLRFMGQGMNY*TWPRAE
Trigger: TTCTGCTCTTGGCCAGGTGCAGTAGTTCATGCCCTG...ACCCATGAACCTCAAGAACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp AACCCGGTGACAACAGCTGGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGAGGCCACAGAAGGGCTaGTTCTCAGAGAGTCACTTT +
Preference number: 4 (lower is better)
Translates to: NPVTTAGAFISSKFPDEQRPQKG*FSESHF
Trigger: AAAGTGACTCTCTGAGAACCAGCCCTTCTGTGGCCT...CTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCCAGCTGTTGTCACCGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp CAGCAGCATCTCACTGCCTCACTAAACCTGCTGCCCAGTGAGATGAAAAGAAAAGGGATGTGCTCAGGTTaGGGTACTCCTTCCGCACCA +
Preference number: 4 (lower is better)
Translates to: QQHLTASLNLLPSEMKRKGMCSG*GTPSAP
Trigger: TGGTGCGGAAGGAGTACCCCAACCTGAGCACATCCC...TTTTCTTTTCATCTCACTGGGCAGCAGGTTTAGTGAGGCAGTGAGATGCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTCGACATGGCAGCCCCTaGGGTCAGTGTGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: QYREVLPELTSFLNSRHVRHGSP*GQCGAA
Trigger: TGCTGCCCCACACTGACCCCAGGGGCTGCCATGTCG...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp GCCAGGAGTGCTTTTTGGCACTTCCAGCTCAGCCAGTACCGTAGAGGATCCAGGAATTGGATAGTTGCTTaGTATCCATCTGTCTGGGCG +
Preference number: 4 (lower is better)
Translates to: ARSAFWHFQLSQYRRGSRNWIVA*YPSVWA
Trigger: CGCCCAGACAGATGGATACCAAGCAACTATCCAATT...CCTGGATCCTCTACGGTACTGGCTGAGCTGGAAGTGCCAAAAAGCACTCCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp GCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCCTGCATGCCCCCATACTCCTTaGGGAGGATGCTTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: AYPKMGSCSYLRLFLHPACPHTP*GGCFLE
Trigger: TTCCAAGAAGCATCCTCCCCAAGGAGTATGGGGGCA...TGCAGGATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR CCA 90 bp GGGCCAGAACTTCTCCCTGAAGGAACATACTCCCAGTTCTTGAGGTTCATGGGTGCCACTTCTGCCTCCTaGGTTCACGTGATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: GPELLPEGTYSQFLRFMGATSAS*VHVILL
Trigger: CAGAAGAATCACGTGAACCCAGGAGGCAGAAGTGGC...ACCCATGAACCTCAAGAACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp CCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCCCACTTGCCCTGCTTaGGCCTTTTCAGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: PKAYPKMGSCSYLRLFLHPTCPA*AFSAVC
Trigger: ACACACTGCTGAAAAGGCCCAAGCAGGGCAAGTGGG...ATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp GCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCCTGCAATCTGTCTTCCCTCTTaGGGAAGCCTCCACCCAGTT +
Preference number: 4 (lower is better)
Translates to: AYPKMGSCSYLRLFLHPAICLPS*GSLHPV
Trigger: AACTGGGTGGAGGCTTCCCCAAGAGGGAAGACAGAT...TGCAGGATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp GGGCCAGAACTTCTCCCTGAAGGAACATACTCCCAGTTCTTGAGGTTCATGGGTATCTGTCTTCCCTCTTaGGGAAGCCTCCACCCAGTT +
Preference number: 4 (lower is better)
Translates to: GPELLPEGTYSQFLRFMGICLPS*GSLHPV
Trigger: AACTGGGTGGAGGCTTCCCCAAGAGGGAAGACAGAT...ACCCATGAACCTCAAGAACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp CCCATACTCCTTGGGGAGGATGCTTCTTGGAAGGTTTGTGTGGAGAGAGTTCAACCATGGAGGAAGAACTaGGCGGATGCAGACGACATG +
Preference number: 4 (lower is better)
Translates to: PILLGEDASWKVCVERVQPWRKN*ADADDM
Trigger: CATGTCGTCTGCATCCGCCCAGTTCTTCCTCCATGG...TTGAACTCTCTCCACACAAACCTTCCAAGAAGCATCCTCCCCAAGGAGTATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372906.2
CDS-3UTR CCA 90 bp ACAGCTGTGACTTCACAGCTCGCAAGGAGTCGTCACACTGTGCATCTGAGGTCATTCAAGTCAGACCCATaGAGGAAGAACTGGGCGGAT +
Preference number: 4 (lower is better)
Translates to: TAVTSQLARSRHTVHLRSFKSDP*RKNWAD
Trigger: ATCCGCCCAGTTCTTCCTCCATGGGTCTGACTTGAA...TGACCTCAGATGCACAGTGTGACGACTCCTTGCGAGCTGTGAAGTCACAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372906.2
CDS-3UTR TCA 90 bp GCCAGGAGTGCTTTTTGGCACTTCCAGCTCAGCCAGTACCGTAGAGGATCCAGGGTGCTGCTTATGTCCTaGTGCTTACATGATTCAGTT +
Preference number: 4 (lower is better)
Translates to: ARSAFWHFQLSQYRRGSRVLLMS*CLHDSV
Trigger: AACTGAATCATGTAAGCATCAGGACATAAGCAGCAC...CCTGGATCCTCTACGGTACTGGCTGAGCTGGAAGTGCCAAAAAGCACTCCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp CCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCAGTGTCTGTGGCAGTaGAGCCAACTAGATACCAGG +
Preference number: 4 (lower is better)
Translates to: PKAYPKMGSCSYLRLFLHQCLWQ*SQLDTR
Trigger: CCTGGTATCTAGTTGGCTTCACTGCCACAGACACTG...ATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp GCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCCTGCACCACCTGGGTTTAAGTaGTTCTCCTGCTTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: AYPKMGSCSYLRLFLHPAPPGFK*FSCFSF
Trigger: GAAGCTGAAGCAGGAGAATCACTTAAACCCAGGTGG...TGCAGGATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp AACCCGGTGACAACAGCTGGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGTGCTGCCCAGTGAGATaGAAAGAAAAACAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: NPVTTAGAFISSKFPDEQCCPVR*KEKQPH
Trigger: ATGGGGCTGTTTTTCTTTTCATCTCACTGGGCAGCA...CTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCCAGCTGTTGTCACCGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp TCACAAAATCGTCTTCTGAAGCCAGCAGTACCGCGTTCCAGGTGGCAGTGTCCAACTCCTTGGGGAGGATaGTTCTTGGAAGGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: SQNRLLKPAVPRSRWQCPTPWGG*FLEGLC
Trigger: ACACAAACCTTCCAAGAAGCATCCTCCCCAAGGAGT...TGGACACTGCCACCTGGAACGCGGTACTGCTGGCTTCAGAAGACGATTTTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372906.2
CDS-3UTR GCA 90 bp GCCAGGAGTGCTTTTTGGCACTTCCAGCTCAGCCAGTACCGTAGAGGATCCAGGCATTTGACCACAAAGTaGTGCTTATGTCCTGATGCT +
Preference number: 4 (lower is better)
Translates to: ARSAFWHFQLSQYRRGSRHLTTK*CLCPDA
Trigger: AGCATCAGGACATAAGCAGCACTTTGTGGTCAAATG...CCTGGATCCTCTACGGTACTGGCTGAGCTGGAAGTGCCAAAAAGCACTCCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp TCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTGAATCCGCGATCTTGGCTCACTaGCACTTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SQAVPPSCSLITRSKTESAILAH*HFCLLG
Trigger: ACCCAGGAGGCAGAAGTGGCAGTGAGCCAAGATCGC...GGATTCAGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp GCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCCTGCAAGAAGCAGCCAGGAGTaGTTTTTGGCACTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: AYPKMGSCSYLRLFLHPARSSQE*FLALPA
Trigger: AGCTGGAAGTGCCAAAAAGCACTCCTGGCTGCTTCT...TGCAGGATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp GGGCCAGAACTTCTCCCTGAAGGAACATACTCCCAGTTCTTGAGGTTCATGGGTAGAAGCAGCCAGGAGTaGTTTTTGGCACTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GPELLPEGTYSQFLRFMGRSSQE*FLALPA
Trigger: AGCTGGAAGTGCCAAAAAGCACTCCTGGCTGCTTCT...ACCCATGAACCTCAAGAACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp CCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATTTCAGCCATCCCACTTaGCCTGCTTGGGCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: PKAYPKMGSCSYLRLFLHFSHPT*PAWAFS
Trigger: TGAAAAGGCCCAAGCAGGGCAAGTGGGATGGCTGAA...ATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp AAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTGAAGAACTGGGCGGATaGAGACGACATGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: KVTKGLPQNGLMLISQAVEELGG*RRHGSP
Trigger: GGGGCTGCCATGTCGTCTGCATCCGCCCAGTTCTTC...AACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372906.2
CDS-3UTR CCA 90 bp TCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTGAATCCGGGATGTGCTCAGGTTaGGGTACTCCTTCCGCACCA +
Preference number: 4 (lower is better)
Translates to: SQAVPPSCSLITRSKTESGMCSG*GTPSAP
Trigger: TGGTGCGGAAGGAGTACCCCAACCTGAGCACATCCC...GGATTCAGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR CCA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTCGGATGCAGACGACATaGCAGCCCCTGGGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: QYREVLPELTSFLNSRHVRMQTT*QPLGSV
Trigger: CACTGACCCCAGGGGCTGCCATGTCGTCTGCATCCG...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp AACCCGGTGACAACAGCTGGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGCTGGTCACCTTAACCTaGCCTCACAAAAGCCATCTT +
Preference number: 4 (lower is better)
Translates to: NPVTTAGAFISSKFPDEQLVTLT*PHKSHL
Trigger: AAGATGGCTTTTGTGAGGCCAGGTTAAGGTGACCAG...CTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCCAGCTGTTGTCACCGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp GGGCCAGAACTTCTCCCTGAAGGAACATACTCCCAGTTCTTGAGGTTCATGGGTAACATTCAGGCTGACTaGTTCACCCACACCAGAGAG +
Preference number: 4 (lower is better)
Translates to: GPELLPEGTYSQFLRFMGNIQAD*FTHTRE
Trigger: CTCTCTGGTGTGGGTGAACCAGTCAGCCTGAATGTT...ACCCATGAACCTCAAGAACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp GGGCCAGAACTTCTCCCTGAAGGAACATACTCCCAGTTCTTGAGGTTCATGGGTCACGCAGGGAGGTCTTaGTTTCACAGCTTGGTTCAA +
Preference number: 4 (lower is better)
Translates to: GPELLPEGTYSQFLRFMGHAGRS*FHSLVQ
Trigger: TTGAACCAAGCTGTGAAACCAAGACCTCCCTGCGTG...ACCCATGAACCTCAAGAACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp CAGCAGCATCTCACTGCCTCACTAAACCTGCTGCCCAGTGAGATGAAAAGAAAACAGGCGGGAGTGCAGTaGCATAGTCTTGGCTTACTG +
Preference number: 4 (lower is better)
Translates to: QQHLTASLNLLPSEMKRKQAGVQ*HSLGLL
Trigger: CAGTAAGCCAAGACTATGCCACTGCACTCCCGCCTG...TTTTCTTTTCATCTCACTGGGCAGCAGGTTTAGTGAGGCAGTGAGATGCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp GCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCCTGCAATGGCTTCAAGTTATTaGAGACTTCGGGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: AYPKMGSCSYLRLFLHPAMASSY*RLRASF
Trigger: GAAGCTGGCCCGAAGTCTTCAATAACTTGAAGCCAT...TGCAGGATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR TCA 90 bp CCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCACAAAATCGTCTTCTaGAGCCAGCAGTACCGCGTT +
Preference number: 4 (lower is better)
Translates to: PKAYPKMGSCSYLRLFLHHKIVF*SQQYRV
Trigger: AACGCGGTACTGCTGGCTTCAGAAGACGATTTTGTG...ATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR TCA 90 bp CATGGAGTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATAGTCACACTGTGCATCTaGGGTCAGGCCCTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: HGVIKVTKGLPQNGLMLIVTLCI*GQALGQ
Trigger: CTGCCCGAGGGCCTGACCTCAGATGCACAGTGTGAC...TATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTACTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR TCA 90 bp GGGCCAGAACTTCTCCCTGAAGGAACATACTCCCAGTTCTTGAGGTTCATGGGTTCCGGCTTCCACATTTaGCCACAAAGTGCTGCTTAT +
Preference number: 4 (lower is better)
Translates to: GPELLPEGTYSQFLRFMGSGFHI*PQSAAY
Trigger: ATAAGCAGCACTTTGTGGTCAAATGTGGAAGCCGGA...ACCCATGAACCTCAAGAACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp GTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGCAGGCCAGTGGGTTCTaGACCCCCTCCTTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: VIKVTKGLPQNGLMLISQQASGF*TPSFPP
Trigger: AGGAGGGAAGGAGGGGGTTCAGAACCCACTGGCCTG...CTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp GCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCCTGCAACTCCTTCTAGAAGCTaGGTGAAACCACTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: AYPKMGSCSYLRLFLHPATPSRS*VKPLLP
Trigger: AGGAAGGAGTGGTTTCACTCAGCTTCTAGAAGGAGT...TGCAGGATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp GGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGCAGAGGTCTATACTTAGGCATACTCCCAGTTCTTaGGGTTCATGGGTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: GAFISSKFPDEQQRSILRHTPSS*GSWVCL
Trigger: GAGGCAAACCCATGAACCTCAAGAACTGGGAGTATG...CCTAAGTATAGACCTCTGCTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp AGGGATGTTAAGCCAGCTCATCAAAGGCCACGTAGTAAGGTAAAGGTGGAGCCCTGCTGCCCAGTGAGATaGAAAGAAAAACAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: RDVKPAHQRPRSKVKVEPCCPVR*KEKQPH
Trigger: ATGGGGCTGTTTTTCTTTTCATCTCACTGGGCAGCA...GGGCTCCACCTTTACCTTACTACGTGGCCTTTGATGAGCTGGCTTAACATCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp TCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTGAATCCGGTCGTAATCAAACTTaGGGGCTCGGAGGAAGCGCA +
Preference number: 4 (lower is better)
Translates to: SQAVPPSCSLITRSKTESGRNQT*GLGGSA
Trigger: TGCGCTTCCTCCGAGCCCGCAAGTTTGATTACGACC...GGATTCAGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR GCA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTATCTGTCTGGGCGGATaGAGACGACATGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: QYREVLPELTSFLNSRHVICLGG*RRHGSP
Trigger: GGGGCTGCCATGTCGTCTGCATCCGCCCAGACAGAT...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp AACCCGGTGACAACAGCTGGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGAACCATCCTGGAGGATaGCAATCACCTTTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: NPVTTAGAFISSKFPDEQNHPGG*QSPFWL
Trigger: TAGCCAAAAAGGTGATTGGCATCCTCCAGGATGGTT...CTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCCAGCTGTTGTCACCGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp AAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTGCGATCTTGGCTCACTaGCACTTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: KVTKGLPQNGLMLISQAVAILAH*HFCLLG
Trigger: ACCCAGGAGGCAGAAGTGGCAGTGAGCCAAGATCGC...AACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp AACCCGGTGACAACAGCTGGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGAATGCACGGAGAAGGTaGACACACAACACAGTACTT +
Preference number: 4 (lower is better)
Translates to: NPVTTAGAFISSKFPDEQNARRR*THNTVL
Trigger: AAGTACTGTGTTGTGTGTGCACCTTCTCCGTGCATT...CTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCCAGCTGTTGTCACCGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp AACCCGGTGACAACAGCTGGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGGCGACTGGCCAGGAATaGAGTGTAGAATTGAAACAT +
Preference number: 4 (lower is better)
Translates to: NPVTTAGAFISSKFPDEQATGQE*SVELKH
Trigger: ATGTTTCAATTCTACACTGCATTCCTGGCCAGTCGC...CTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCCAGCTGTTGTCACCGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp GTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGCGGATGCAGACGACATaGCAGCCCCTGGGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: VIKVTKGLPQNGLMLISQRMQTT*QPLGSV
Trigger: CACTGACCCCAGGGGCTGCCATGTCGTCTGCATCCG...CTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR CCA 90 bp CATGGAGTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCGGGCAGCAGCGTCTaGCCCAGGATGCTGTCACAG +
Preference number: 4 (lower is better)
Translates to: HGVIKVTKGLPQNGLMLISGSSV*PRMLSQ
Trigger: CTGTGACAGCATCCTGGGCCAGACGCTGCTGCCCGA...TATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTACTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR CCA 90 bp AACCCGGTGACAACAGCTGGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGCACTGGCCAAACAGGTaGTTTTTCTCCTGGAAAAGT +
Preference number: 4 (lower is better)
Translates to: NPVTTAGAFISSKFPDEQHWPNR*FFSWKS
Trigger: ACTTTTCCAGGAGAAAAACCACCTGTTTGGCCAGTG...CTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCCAGCTGTTGTCACCGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp AAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTTCCCATCCAGGCCAGTaGGTTCTGAACCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: KVTKGLPQNGLMLISQAVSHPGQ*VLNPLL
Trigger: AAGGAGGGGGTTCAGAACCCACTGGCCTGGATGGGA...AACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp GCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCCTGCAGACATGAAGCCAGGGTaGCACTTTTGGCTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: AYPKMGSCSYLRLFLHPADMKPG*HFWLFL
Trigger: CAAAAACAGCCAAAAGTGCCACCCTGGCTTCATGTC...TGCAGGATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp AAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTACTCGTCACCCAGGCTaGAGTGCAATGGCGCGATGT +
Preference number: 4 (lower is better)
Translates to: KVTKGLPQNGLMLISQAVTRHPG*SAMARC
Trigger: ACATCGCGCCATTGCACTCCAGCCTGGGTGACGAGT...AACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp CCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATAAGGAATGTGACCAGTaGCTGAAACAGTGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: PKAYPKMGSCSYLRLFLHKECDQ*LKQCPK
Trigger: CTTGGGGCACTGTTTCAGCCACTGGTCACATTCCTT...ATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp TCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTGAATCCCTCATTTTCAGAGAGTaGGGCCACAGAAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: SQAVPPSCSLITRSKTESLIFRE*GHRRAG
Trigger: ACCAGCCCTTCTGTGGCCTCACTCTCTGAAAATGAG...GGATTCAGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR TCA 90 bp CATGGAGTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATACAGCTGTGGTAGTTaGCGAGGAGCTGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: HGVIKVTKGLPQNGLMLIYSCGS*RGAAGP
Trigger: GGGCCCTGCAGCTCCTCGTCAACTACCACAGCTGTA...TATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTACTCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR TCA 90 bp CTCATATCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTGCAGGAGTACAGCTGTaGCTTCACAGCTCGCAAGGA +
Preference number: 4 (lower is better)
Translates to: LISQAVPPSCSLITRSKTAGVQL*LHSSQG
Trigger: TCCTTGCGAGCTGTGAAGTCACAGCTGTACTCCTGC...AGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGATATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR TCA 90 bp AAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTGCAGGAGTACAGCTGTaGCTTCACAGCTCGCAAGGA +
Preference number: 4 (lower is better)
Translates to: KVTKGLPQNGLMLISQAVAGVQL*LHSSQG
Trigger: TCCTTGCGAGCTGTGAAGTCACAGCTGTACTCCTGC...AACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR TCA 90 bp CAGCAGCATCTCACTGCCTCACTAAACCTGCTGCCCAGTGAGATGAAAAGAAAAGGCAGGGCTAATTGGTaGCACATCTCTCTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: QQHLTASLNLLPSEMKRKGRANW*HISLGK
Trigger: CTTTCCAAGAGAGATGTGTCACCAATTAGCCCTGCC...TTTTCTTTTCATCTCACTGGGCAGCAGGTTTAGTGAGGCAGTGAGATGCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp AGGGATGTTAAGCCAGCTCATCAAAGGCCACGTAGTAAGGTAAAGGTGGAGCCCGTCCCTTCTGGTCTTTaGGATAATTCTCTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: RDVKPAHQRPRSKVKVEPVPSGL*DNSLGE
Trigger: CTCTCCTAGAGAATTATCTCAAAGACCAGAAGGGAC...GGGCTCCACCTTTACCTTACTACGTGGCCTTTGATGAGCTGGCTTAACATCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp GGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGCAGAGGTCTATACTTAGGACTCCTTCTAGAAGCTaGGTGAAACCACTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GAFISSKFPDEQQRSILRTPSRS*VKPLLP
Trigger: AGGAAGGAGTGGTTTCACTCAGCTTCTAGAAGGAGT...CCTAAGTATAGACCTCTGCTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp CATGGAGTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATGCGCTCCCCAGTGCTaGGTAAGGCTCACTGTGCTC +
Preference number: 4 (lower is better)
Translates to: HGVIKVTKGLPQNGLMLICAPQC*VRLTVL
Trigger: GAGCACAGTGAGCCTTACTCAGCACTGGGGAGCGCA...TATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTACTCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp GTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGACTCCGGACTTCAGGTaGTACACCCACCTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: VIKVTKGLPQNGLMLISQTPDFR*YTHLSR
Trigger: GCGGCTGAGGTGGGTGTATCACCTGAAGTCCGGAGT...CTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp AAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTAATGTGACCAGTGGCTaGAACAGTGCCCCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: KVTKGLPQNGLMLISQAVNVTSG*NSAPSW
Trigger: CCAGCTTGGGGCACTGTTTCAGCCACTGGTCACATT...AACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp CTCATATCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTCATTCCGGCTTTTCCTaGAGCTCTTCCCGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LISQAVPPSCSLITRSKTHSGFS*SSSRAL
Trigger: CAAAGCCCGGGAAGAGCTGCAGGAAAAGCCGGAATG...AGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGATATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR GCA 90 bp CTCATATCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTCATCGTCGAGGGATGTaGTCAGGTTGGGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: LISQAVPPSCSLITRSKTHRRGM*SGWGTP
Trigger: AGGAGTACCCCAACCTGAGCACATCCCTCGACGATG...AGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGATATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR GCA 90 bp AAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTGGTCGTAATCAAACTTaGGGGCTCGGAGGAAGCGCA +
Preference number: 4 (lower is better)
Translates to: KVTKGLPQNGLMLISQAVGRNQT*GLGGSA
Trigger: TGCGCTTCCTCCGAGCCCGCAAGTTTGATTACGACC...AACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR GCA 90 bp GGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGCAGAGGTCTATACTTAGGACTCCTTGGGGAGGATaGTTCTTGGAAGGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: GAFISSKFPDEQQRSILRTPWGG*FLEGLC
Trigger: ACACAAACCTTCCAAGAAGCATCCTCCCCAAGGAGT...CCTAAGTATAGACCTCTGCTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp GCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCCTGCAGCTGTTCCTCCATCCTaGAGTTTAATTACAAGGAGC +
Preference number: 4 (lower is better)
Translates to: AYPKMGSCSYLRLFLHPAAVPPS*SLITRS
Trigger: GCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGC...TGCAGGATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR GCA 90 bp GGGCCAGAACTTCTCCCTGAAGGAACATACTCCCAGTTCTTGAGGTTCATGGGTTTTGACACAGAATATTaGTTTGTCACCCAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: GPELLPEGTYSQFLRFMGFDTEY*FVTQAG
Trigger: TCCCGCCTGGGTGACAAAGCAATATTCTGTGTCAAA...ACCCATGAACCTCAAGAACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp AAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTGCAGCAGCATCTCACTaGCTCACTAAACCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: KVTKGLPQNGLMLISQAVAAASH*LTKPAA
Trigger: GGCAGCAGGTTTAGTGAGGCAGTGAGATGCTGCTGC...AACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTGGGATGTGCTCAGGTTaGGGTACTCCTTCCGCACCA +
Preference number: 4 (lower is better)
Translates to: QYREVLPELTSFLNSRHVGMCSG*GTPSAP
Trigger: TGGTGCGGAAGGAGTACCCCAACCTGAGCACATCCC...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp ATTTACTGTCCCATTTCCTTCCGACACCACACTATCTTGAATTTAGGGAAAAGTGTACCGCGTTCCAGGTaGCAGTGTCCAGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: IYCPISFRHHTILNLGKSVPRSR*QCPAPQ
Trigger: CTGGGGAGCTGGACACTGCCACCTGGAACGCGGTAC...ACTTTTCCCTAAATTCAAGATAGTGTGGTGTCGGAAGGAAATGGGACAGTAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp GGGCCAGAACTTCTCCCTGAAGGAACATACTCCCAGTTCTTGAGGTTCATGGGTAGGCTTACCCCAAAATaGGCTCATGCTCATATCTCA +
Preference number: 4 (lower is better)
Translates to: GPELLPEGTYSQFLRFMGRLTPK*AHAHIS
Trigger: TGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCT...ACCCATGAACCTCAAGAACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp AACCCGGTGACAACAGCTGGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGCCAGAGTCTCAGGGATaGAAGGAATTCATCATACAA +
Preference number: 4 (lower is better)
Translates to: NPVTTAGAFISSKFPDEQPESQG*KEFIIQ
Trigger: TTGTATGATGAATTCCTTCCATCCCTGAGACTCTGG...CTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCCAGCTGTTGTCACCGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp CTCATATCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTCCCACTTGCCCTGCTTaGGCCTTTTCAGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: LISQAVPPSCSLITRSKTPTCPA*AFSAVC
Trigger: ACACACTGCTGAAAAGGCCCAAGCAGGGCAAGTGGG...AGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGATATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp CAGCAGCATCTCACTGCCTCACTAAACCTGCTGCCCAGTGAGATGAAAAGAAAACACGCAGGGAGGTCTTaGTTTCACAGCTTGGTTCAA +
Preference number: 4 (lower is better)
Translates to: QQHLTASLNLLPSEMKRKHAGRS*FHSLVQ
Trigger: TTGAACCAAGCTGTGAAACCAAGACCTCCCTGCGTG...TTTTCTTTTCATCTCACTGGGCAGCAGGTTTAGTGAGGCAGTGAGATGCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp GCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCCTGCATCCATCAGAGGCTCTTaGTCAGAGAGGTTTCAAGTA +
Preference number: 4 (lower is better)
Translates to: AYPKMGSCSYLRLFLHPASIRGS*SERFQV
Trigger: TACTTGAAACCTCTCTGACCAAGAGCCTCTGATGGA...TGCAGGATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR CAA 72 bp TATTGCAAACTTCAACCAGTGGGTCCCAGAGGTGCTTaGAAGTCTCCGGCTTCCACATTTGACCACAAAGTG +
Preference number: 4 (lower is better)
Translates to: YCKLQPVGPRGA*KSPASTFDHKV
Trigger: CACTTTGTGGTCAAATGTGGAAGCCGGAGACTTCAAAGCACCTCTGGGACCCACTGGTTGAAGTTTGCAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTGCAGGAGTACAGCTGTaGCTTCACAGCTCGCAAGGA +
Preference number: 4 (lower is better)
Translates to: QYREVLPELTSFLNSRHVAGVQL*LHSSQG
Trigger: TCCTTGCGAGCTGTGAAGTCACAGCTGTACTCCTGC...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp GCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCCTGCATACTTAGGGTTCCTGTaGAAAACACAAACTCCCAGT +
Preference number: 4 (lower is better)
Translates to: AYPKMGSCSYLRLFLHPAYLGFL*KTQTPS
Trigger: ACTGGGAGTTTGTGTTTTTCACAGGAACCCTAAGTA...TGCAGGATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp GGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGCAGAGGTCTATACTTAGGGAGGTTCTAAAGTGCTaGAATGCAGAACATTCAGGC +
Preference number: 4 (lower is better)
Translates to: GAFISSKFPDEQQRSILREVLKC*NAEHSG
Trigger: GCCTGAATGTTCTGCATTTCAGCACTTTAGAACCTC...CCTAAGTATAGACCTCTGCTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp CCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATGGTGTCAAAACTATCTaGTACCTCTTCGGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: PKAYPKMGSCSYLRLFLHGVKTI*YLFGAK
Trigger: TTTGGCTCCGAAGAGGTATCAGATAGTTTTGACACC...ATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp CTCATATCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTCCTGCTGAGACAGCCTaGCACAAACATCCTGGTGAA +
Preference number: 4 (lower is better)
Translates to: LISQAVPPSCSLITRSKTPAETA*HKHPGE
Trigger: TTCACCAGGATGTTTGTGTCAGGCTGTCTCAGCAGG...AGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGATATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp TCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTGAATCCGCCAGAACTTCTCCCTaGAGGAACATACTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: SQAVPPSCSLITRSKTESARTSP*RNILPV
Trigger: AACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGC...GGATTCAGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp CAGCAGCATCTCACTGCCTCACTAAACCTGCTGCCCAGTGAGATGAAAAGAAAATTGAAGCAAGGAATGTaGCCAGTGGCTGAAACAGTG +
Preference number: 4 (lower is better)
Translates to: QQHLTASLNLLPSEMKRKLKQGM*PVAETV
Trigger: CACTGTTTCAGCCACTGGTCACATTCCTTGCTTCAA...TTTTCTTTTCATCTCACTGGGCAGCAGGTTTAGTGAGGCAGTGAGATGCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp TCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTGAATCCATGTCACGAAGGGCCTaGACATCTCGAAGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: SQAVPPSCSLITRSKTESMSRRA*TSRSLH
Trigger: ATGGAGACTTCGAGATGTGCAGGCCCTTCGTGACAT...GGATTCAGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR GCA 90 bp ATTTACTGTCCCATTTCCTTCCGACACCACACTATCTTGAATTTAGGGAAAAGTATCTGTCTGGGCGGATaGAGACGACATGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: IYCPISFRHHTILNLGKSICLGG*RRHGSP
Trigger: GGGGCTGCCATGTCGTCTGCATCCGCCCAGACAGAT...ACTTTTCCCTAAATTCAAGATAGTGTGGTGTCGGAAGGAAATGGGACAGTAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp GCCAGGAGTGCTTTTTGGCACTTCCAGCTCAGCCAGTACCGTAGAGGATCCAGGCACTCCTTTGTAGTCTaGAAGAATTACAATTCCATT +
Preference number: 4 (lower is better)
Translates to: ARSAFWHFQLSQYRRGSRHSFVV*KNYNSI
Trigger: AATGGAATTGTAATTCTTGCAGACTACAAAGGAGTG...CCTGGATCCTCTACGGTACTGGCTGAGCTGGAAGTGCCAAAAAGCACTCCTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp GGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGCAGAGGTCTATACTTAGGAACCATCCTGGAGGATaGCAATCACCTTTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: GAFISSKFPDEQQRSILRNHPGG*QSPFWL
Trigger: TAGCCAAAAAGGTGATTGGCATCCTCCAGGATGGTT...CCTAAGTATAGACCTCTGCTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp CAGCAGCATCTCACTGCCTCACTAAACCTGCTGCCCAGTGAGATGAAAAGAAAACTGCTTTTATCCGAATaGGGAAACCATCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: QQHLTASLNLLPSEMKRKLLLSE*GNHPGG
Trigger: TCCTCCAGGATGGTTTCCCCATTCGGATAAAAGCAG...TTTTCTTTTCATCTCACTGGGCAGCAGGTTTAGTGAGGCAGTGAGATGCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp GCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCCTGCAGGTTCATTCACCACATaGACTGCTTTTATCCGAATG +
Preference number: 4 (lower is better)
Translates to: AYPKMGSCSYLRLFLHPAGSFTT*TAFIRM
Trigger: CATTCGGATAAAAGCAGTCCATGTGGTGAATGAACC...TGCAGGATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp TCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTGAATCCGGGGAGGATGCTTCTTaGAAGGTTTGTGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: SQAVPPSCSLITRSKTESGEDAS*KVCVER
Trigger: TCTCTCCACACAAACCTTCCAAGAAGCATCCTCCCC...GGATTCAGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR CCA 90 bp AAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTTGCCCCCATACTCCTTaGGGAGGATGCTTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: KVTKGLPQNGLMLISQAVCPHTP*GGCFLE
Trigger: TTCCAAGAAGCATCCTCCCCAAGGAGTATGGGGGCA...AACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR CCA 90 bp CCCATACTCCTTGGGGAGGATGCTTCTTGGAAGGTTTGTGTGGAGAGAGTTCAACAGGCAGGAACAGGTTaGCAGAACTCTTTCACAAAA +
Preference number: 4 (lower is better)
Translates to: PILLGEDASWKVCVERVQQAGTG*QNSFTK
Trigger: TTTTGTGAAAGAGTTCTGCCAACCTGTTCCTGCCTG...TTGAACTCTCTCCACACAAACCTTCCAAGAAGCATCCTCCCCAAGGAGTATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372906.2
CDS-3UTR CCA 90 bp GCCAGGAGTGCTTTTTGGCACTTCCAGCTCAGCCAGTACCGTAGAGGATCCAGGATGTTTAAGAATCAGTaGGGACATTTTCCATGTCTT +
Preference number: 4 (lower is better)
Translates to: ARSAFWHFQLSQYRRGSRMFKNQ*GHFPCL
Trigger: AAGACATGGAAAATGTCCCCACTGATTCTTAAACAT...CCTGGATCCTCTACGGTACTGGCTGAGCTGGAAGTGCCAAAAAGCACTCCTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp AGGGATGTTAAGCCAGCTCATCAAAGGCCACGTAGTAAGGTAAAGGTGGAGCCCAGGTGGTTTTTCTCCTaGAAAAGTGGGATCAAAGTG +
Preference number: 4 (lower is better)
Translates to: RDVKPAHQRPRSKVKVEPRWFFS*KSGIKV
Trigger: CACTTTGATCCCACTTTTCCAGGAGAAAAACCACCT...GGGCTCCACCTTTACCTTACTACGTGGCCTTTGATGAGCTGGCTTAACATCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp GCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCCTGCAAGGTGGTTTTTCTCCTaGAAAAGTGGGATCAAAGTG +
Preference number: 4 (lower is better)
Translates to: AYPKMGSCSYLRLFLHPARWFFS*KSGIKV
Trigger: CACTTTGATCCCACTTTTCCAGGAGAAAAACCACCT...TGCAGGATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp GCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCCTGCAACAAGTAGTTCTCACTaGCCAAACAGGTGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: AYPKMGSCSYLRLFLHPATSSSH*PNRWFF
Trigger: GAAAAACCACCTGTTTGGCCAGTGAGAACTACTTGT...TGCAGGATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp CAGCAGCATCTCACTGCCTCACTAAACCTGCTGCCCAGTGAGATGAAAAGAAAACTGGTCACCTTAACCTaGCCTCACAAAAGCCATCTT +
Preference number: 4 (lower is better)
Translates to: QQHLTASLNLLPSEMKRKLVTLT*PHKSHL
Trigger: AAGATGGCTTTTGTGAGGCCAGGTTAAGGTGACCAG...TTTTCTTTTCATCTCACTGGGCAGCAGGTTTAGTGAGGCAGTGAGATGCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp AGGGATGTTAAGCCAGCTCATCAAAGGCCACGTAGTAAGGTAAAGGTGGAGCCCCCAGAGTCTCAGGGATaGAAGGAATTCATCATACAA +
Preference number: 4 (lower is better)
Translates to: RDVKPAHQRPRSKVKVEPPESQG*KEFIIQ
Trigger: TTGTATGATGAATTCCTTCCATCCCTGAGACTCTGG...GGGCTCCACCTTTACCTTACTACGTGGCCTTTGATGAGCTGGCTTAACATCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp AAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTGCCACTTCTGCCTCCTaGGTTCACGTGATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: KVTKGLPQNGLMLISQAVATSAS*VHVILL
Trigger: CAGAAGAATCACGTGAACCCAGGAGGCAGAAGTGGC...AACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTCAGGCGGGAGTGCAGTaGCATAGTCTTGGCTTACTG +
Preference number: 4 (lower is better)
Translates to: QYREVLPELTSFLNSRHVQAGVQ*HSLGLL
Trigger: CAGTAAGCCAAGACTATGCCACTGCACTCCCGCCTG...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp GGGCCAGAACTTCTCCCTGAAGGAACATACTCCCAGTTCTTGAGGTTCATGGGTCACATTTGGTCACACTaGAGGTTTGGCCAAATTATT +
Preference number: 4 (lower is better)
Translates to: GPELLPEGTYSQFLRFMGHIWSH*RFGQII
Trigger: AATAATTTGGCCAAACCTTCAGTGTGACCAAATGTG...ACCCATGAACCTCAAGAACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp GGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGCAGAGGTCTATACTTAGGTACTTAGGGTTCCTGTaGAAAACACAAACTCCCAGT +
Preference number: 4 (lower is better)
Translates to: GAFISSKFPDEQQRSILRYLGFL*KTQTPS
Trigger: ACTGGGAGTTTGTGTTTTTCACAGGAACCCTAAGTA...CCTAAGTATAGACCTCTGCTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp CCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATGTGCTGCTTATGTCCTaGTGCTTACATGATTCAGTT +
Preference number: 4 (lower is better)
Translates to: PKAYPKMGSCSYLRLFLHVLLMS*CLHDSV
Trigger: AACTGAATCATGTAAGCATCAGGACATAAGCAGCAC...ATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp AACCCGGTGACAACAGCTGGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGTCCAGCATTTTAGGTTaGGTAAAATCATTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: NPVTTAGAFISSKFPDEQSSILG*VKSFPA
Trigger: AGCAGGAAATGATTTTACTCAACCTAAAATGCTGGA...CTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCCAGCTGTTGTCACCGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp AACCCGGTGACAACAGCTGGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGGGTTACTATCCATGGTaGAAAGAACTTTCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: NPVTTAGAFISSKFPDEQGYYPW*KELSLE
Trigger: TTCTAGAGAAAGTTCTTTTCACCATGGATAGTAACC...CTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCCAGCTGTTGTCACCGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTACAAGGAGACCACCTTaGTTTTCACGCAGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: QYREVLPELTSFLNSRHVTRRPP*FSRREV
Trigger: GACCTCCCTGCGTGAAAATCAAGGTGGTCTCCTTGT...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTCCTGCTGAGACAGCCTaGCACAAACATCCTGGTGAA +
Preference number: 4 (lower is better)
Translates to: QYREVLPELTSFLNSRHVPAETA*HKHPGE
Trigger: TTCACCAGGATGTTTGTGTCAGGCTGTCTCAGCAGG...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp AAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCACCTGGGTTTAAGTaGTTCTCCTGCTTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KVTKGLPQNGLMLISQAVPPGFK*FSCFSF
Trigger: GAAGCTGAAGCAGGAGAATCACTTAAACCCAGGTGG...AACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp GGGCCAGAACTTCTCCCTGAAGGAACATACTCCCAGTTCTTGAGGTTCATGGGTAGAAAAACAGCCCCATaGAACAGGAATTTCATCACT +
Preference number: 4 (lower is better)
Translates to: GPELLPEGTYSQFLRFMGRKTAP*NRNFIT
Trigger: AGTGATGAAATTCCTGTTTCATGGGGCTGTTTTTCT...ACCCATGAACCTCAAGAACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp CATGGAGTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATACATTCCGGCTTTTCCTaGAGCTCTTCCCGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: HGVIKVTKGLPQNGLMLIHSGFS*SSSRAL
Trigger: CAAAGCCCGGGAAGAGCTGCAGGAAAAGCCGGAATG...TATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTACTCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR GCA 90 bp GTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGCATCGTCGAGGGATGTaGTCAGGTTGGGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: VIKVTKGLPQNGLMLISQHRRGM*SGWGTP
Trigger: AGGAGTACCCCAACCTGAGCACATCCCTCGACGATG...CTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR GCA 90 bp GGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGCAGAGGTCTATACTTAGGTTGACCACAAAGTGCTaGTTATGTCCTGATGCTTAC +
Preference number: 4 (lower is better)
Translates to: GAFISSKFPDEQQRSILRLTTKC*LCPDAY
Trigger: GTAAGCATCAGGACATAAGCAGCACTTTGTGGTCAA...CCTAAGTATAGACCTCTGCTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp GTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGCCATCCCACTTGCCCTaGTTGGGCCTTTTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: VIKVTKGLPQNGLMLISQPSHLP*LGLFSS
Trigger: ACTGCTGAAAAGGCCCAAGCAGGGCAAGTGGGATGG...CTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTTGGTATCCATCTGTCTaGGCGGATGCAGACGACATG +
Preference number: 4 (lower is better)
Translates to: QYREVLPELTSFLNSRHVWYPSV*ADADDM
Trigger: CATGTCGTCTGCATCCGCCCAGACAGATGGATACCA...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp TCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTGAATCCATGGGGAAACCATCCTaGAGGATGCCAATCACCTTT +
Preference number: 4 (lower is better)
Translates to: SQAVPPSCSLITRSKTESMGKPS*RMPITF
Trigger: AAAGGTGATTGGCATCCTCCAGGATGGTTTCCCCAT...GGATTCAGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp AAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTGGGGAGGATGCTTCTTaGAAGGTTTGTGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: KVTKGLPQNGLMLISQAVGEDAS*KVCVER
Trigger: TCTCTCCACACAAACCTTCCAAGAAGCATCCTCCCC...AACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR CCA 90 bp CAGCAGCATCTCACTGCCTCACTAAACCTGCTGCCCAGTGAGATGAAAAGAAAAAGGCTTACCCCAAAATaGGCTCATGCTCATATCTCA +
Preference number: 4 (lower is better)
Translates to: QQHLTASLNLLPSEMKRKRLTPK*AHAHIS
Trigger: TGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCT...TTTTCTTTTCATCTCACTGGGCAGCAGGTTTAGTGAGGCAGTGAGATGCTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp ATTTACTGTCCCATTTCCTTCCGACACCACACTATCTTGAATTTAGGGAAAAGTACTCGTCACCCAGGCTaGAGTGCAATGGCGCGATGT +
Preference number: 4 (lower is better)
Translates to: IYCPISFRHHTILNLGKSTRHPG*SAMARC
Trigger: ACATCGCGCCATTGCACTCCAGCCTGGGTGACGAGT...ACTTTTCCCTAAATTCAAGATAGTGTGGTGTCGGAAGGAAATGGGACAGTAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp CTCATATCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTAAGGAATGTGACCAGTaGCTGAAACAGTGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: LISQAVPPSCSLITRSKTKECDQ*LKQCPK
Trigger: CTTGGGGCACTGTTTCAGCCACTGGTCACATTCCTT...AGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGATATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp AAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTATGGCTTCAAGTTATTaGAGACTTCGGGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KVTKGLPQNGLMLISQAVMASSY*RLRASF
Trigger: GAAGCTGGCCCGAAGTCTTCAATAACTTGAAGCCAT...AACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR TCA 90 bp TCACATTTGGTCACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCGCTTTCCAAACCCGGTaGCAACAGCTGGGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: SHLVTLKVWPNYFIQVVLAFQTR*QQLGPS
Trigger: TGAAGGCCCCAGCTGTTGTCACCGGGTTTGGAAAGC...GAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGTGACCAAATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp GTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGACAAGGAGACCACCTTaGTTTTCACGCAGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: VIKVTKGLPQNGLMLISQTRRPP*FSRREV
Trigger: GACCTCCCTGCGTGAAAATCAAGGTGGTCTCCTTGT...CTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp CATGGAGTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATAACACAAACATCCTGGTaGAGCCACAAGGAGACCACC +
Preference number: 4 (lower is better)
Translates to: HGVIKVTKGLPQNGLMLITQTSW*SHKETT
Trigger: GGTGGTCTCCTTGTGGCTTCACCAGGATGTTTGTGT...TATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTACTCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp GTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGCAGTGTCTGTGGCAGTaGAGCCAACTAGATACCAGG +
Preference number: 4 (lower is better)
Translates to: VIKVTKGLPQNGLMLISQQCLWQ*SQLDTR
Trigger: CCTGGTATCTAGTTGGCTTCACTGCCACAGACACTG...CTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp GCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCCTGCAAAAAATTCCCAGGATTaGTCTGAGGGTCAAATACTA +
Preference number: 4 (lower is better)
Translates to: AYPKMGSCSYLRLFLHPAKNSQD*SEGQIL
Trigger: TAGTATTTGACCCTCAGATCAATCCTGGGAATTTTT...TGCAGGATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp AACCCGGTGACAACAGCTGGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGCACTCCTTTGTAGTCTaGAAGAATTACAATTCCATT +
Preference number: 4 (lower is better)
Translates to: NPVTTAGAFISSKFPDEQHSFVV*KNYNSI
Trigger: AATGGAATTGTAATTCTTGCAGACTACAAAGGAGTG...CTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCCAGCTGTTGTCACCGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp GGAAAAGAATTAAAGATGGTGACCCTGGGGGACGGGCTAGTAGCAGGAGTACAGCTTAAATTCTCCTTGTaGCTCTCCAAAGAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: GKELKMVTLGDGLVAGVQLKFSL*LSKEKK
Trigger: CTTCTTTTCTTTGGAGAGGCACAAGGAGAATTTAAG...CTGTACTCCTGCTACTAGCCCGTCCCCCAGGGTCACCATCTTTAATTCTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372906.2
CDS-3UTR GCA 90 bp CCCATACTCCTTGGGGAGGATGCTTCTTGGAAGGTTTGTGTGGAGAGAGTTCAACTCCAGATTAATAGTTaGAGACTGGGATTCCAAATG +
Preference number: 4 (lower is better)
Translates to: PILLGEDASWKVCVERVQLQINS*RLGFQM
Trigger: CATTTGGAATCCCAGTCTGCAACTATTAATCTGGAG...TTGAACTCTCTCCACACAAACCTTCCAAGAAGCATCCTCCCCAAGGAGTATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372906.2
CDS-3UTR GCA 90 bp CAGCAGCATCTCACTGCCTCACTAAACCTGCTGCCCAGTGAGATGAAAAGAAAACATTTGACCACAAAGTaGTGCTTATGTCCTGATGCT +
Preference number: 4 (lower is better)
Translates to: QQHLTASLNLLPSEMKRKHLTTK*CLCPDA
Trigger: AGCATCAGGACATAAGCAGCACTTTGTGGTCAAATG...TTTTCTTTTCATCTCACTGGGCAGCAGGTTTAGTGAGGCAGTGAGATGCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp ACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCACTGGCCAAACAAGTGGGTCCCAGAGGTaGTTTGAAGTCTCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: TLKVWPNYFIQVVLTGQTSGSQR*FEVSGF
Trigger: GAAGCCGGAGACTTCAAAGCACCTCTGGGACCCACT...TGTTTGGCCAGTGAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp CCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATTTTCTCCTGGAAAAGTaGGATCAAAGTGACTTTGGT +
Preference number: 4 (lower is better)
Translates to: PKAYPKMGSCSYLRLFLHFLLEK*DQSDFG
Trigger: ACCAAAGTCACTTTGATCCCACTTTTCCAGGAGAAA...ATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTAACATTCAGGCTGACTaGTTCACCCACACCAGAGAG +
Preference number: 4 (lower is better)
Translates to: QYREVLPELTSFLNSRHVNIQAD*FTHTRE
Trigger: CTCTCTGGTGTGGGTGAACCAGTCAGCCTGAATGTT...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp TCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTGAATCCTCCAGAATTCCATGTTaGGATATGGGGGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: SQAVPPSCSLITRSKTESSRIPC*DMGEEE
Trigger: CTCTTCTTCCCCCATATCCCAACATGGAATTCTGGA...GGATTCAGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp CTCATATCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTCCAATGGTTATCTCTTaGAACAGAACGGCCCGACTA +
Preference number: 4 (lower is better)
Translates to: LISQAVPPSCSLITRSKTPMVIS*NRTARL
Trigger: TAGTCGGGCCGTTCTGTTCCAAGAGATAACCATTGG...AGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGATATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372904.7
CDS-3UTR TCA 90 bp TCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTGAATCCTACAAGGAGCAAGACTaGATCCATGGACCCTTAAAT +
Preference number: 4 (lower is better)
Translates to: SQAVPPSCSLITRSKTESYKEQD*IHGPLN
Trigger: ATTTAAGGGTCCATGGATTCAGTCTTGCTCCTTGTA...GGATTCAGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR TCA 90 bp TCACATTTGGTCACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCGTCCCAGAGGTGCTTTaGAGTCTCCGGCTTCCACAT +
Preference number: 4 (lower is better)
Translates to: SHLVTLKVWPNYFIQVVLVPEVL*SLRLPH
Trigger: ATGTGGAAGCCGGAGACTTCAAAGCACCTCTGGGAC...GAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGTGACCAAATGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp TCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTGAATCCGAAAATTGGTGTCAGTaGGTCCCAGGAATACACATA +
Preference number: 4 (lower is better)
Translates to: SQAVPPSCSLITRSKTESENWCQ*VPGIHI
Trigger: TATGTGTATTCCTGGGACTCACTGACACCAATTTTC...GGATTCAGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp TCACATTTGGTCACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCGCAGAACATTCAGGCTaGCTGGTTCACCCACACCAG +
Preference number: 4 (lower is better)
Translates to: SHLVTLKVWPNYFIQVVLAEHSG*LVHPHQ
Trigger: CTGGTGTGGGTGAACCAGTCAGCCTGAATGTTCTGC...GAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGTGACCAAATGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp GGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGCAGAGGTCTATACTTAGGGGTTACTATCCATGGTaGAAAGAACTTTCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: GAFISSKFPDEQQRSILRGYYPW*KELSLE
Trigger: TTCTAGAGAAAGTTCTTTTCACCATGGATAGTAACC...CCTAAGTATAGACCTCTGCTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp CTCATATCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTGTCCCTTCTGGTCTTTaGGATAATTCTCTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: LISQAVPPSCSLITRSKTVPSGL*DNSLGE
Trigger: CTCTCCTAGAGAATTATCTCAAAGACCAGAAGGGAC...AGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGATATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp GGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGCAGAGGTCTATACTTAGGAAAAATTCCCAGGATTaGTCTGAGGGTCAAATACTA +
Preference number: 4 (lower is better)
Translates to: GAFISSKFPDEQQRSILRKNSQD*SEGQIL
Trigger: TAGTATTTGACCCTCAGATCAATCCTGGGAATTTTT...CCTAAGTATAGACCTCTGCTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTACTCCTTGGGGAGGATaGTTCTTGGAAGGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: QYREVLPELTSFLNSRHVTPWGG*FLEGLC
Trigger: ACACAAACCTTCCAAGAAGCATCCTCCCCAAGGAGT...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp AAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTGCTGTTCCTCCATCCTaGAGTTTAATTACAAGGAGC +
Preference number: 4 (lower is better)
Translates to: KVTKGLPQNGLMLISQAVAVPPS*SLITRS
Trigger: GCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGC...AACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR GCA 90 bp CAGCAGCATCTCACTGCCTCACTAAACCTGCTGCCCAGTGAGATGAAAAGAAAACTCCAGATTAATAGTTaGAGACTGGGATTCCAAATG +
Preference number: 4 (lower is better)
Translates to: QQHLTASLNLLPSEMKRKLQINS*RLGFQM
Trigger: CATTTGGAATCCCAGTCTGCAACTATTAATCTGGAG...TTTTCTTTTCATCTCACTGGGCAGCAGGTTTAGTGAGGCAGTGAGATGCTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp GGGCCAGAACTTCTCCCTGAAGGAACATACTCCCAGTTCTTGAGGTTCATGGGTAACTTAAGTTTCTATTaGAAACTTCAACCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: GPELLPEGTYSQFLRFMGNLSFY*KLQPVG
Trigger: ACCCACTGGTTGAAGTTTGCAATAGAAACTTAAGTT...ACCCATGAACCTCAAGAACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp ATTTACTGTCCCATTTCCTTCCGACACCACACTATCTTGAATTTAGGGAAAAGTCAGTGGCTGAAACAGTaGCCCAAGCTGGTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: IYCPISFRHHTILNLGKSQWLKQ*PKLVRE
Trigger: TTCTCTGACCAGCTTGGGGCACTGTTTCAGCCACTG...ACTTTTCCCTAAATTCAAGATAGTGTGGTGTCGGAAGGAAATGGGACAGTAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp GTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGAGGCCACAGAAGGGCTaGTTCTCAGAGAGTCACTTT +
Preference number: 4 (lower is better)
Translates to: VIKVTKGLPQNGLMLISQRPQKG*FSESHF
Trigger: AAAGTGACTCTCTGAGAACCAGCCCTTCTGTGGCCT...CTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR CCA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTATGGGGAAACCATCCTaGAGGATGCCAATCACCTTT +
Preference number: 4 (lower is better)
Translates to: QYREVLPELTSFLNSRHVMGKPS*RMPITF
Trigger: AAAGGTGATTGGCATCCTCCAGGATGGTTTCCCCAT...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTCTGCTTTTATCCGAATaGGGAAACCATCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: QYREVLPELTSFLNSRHVLLLSE*GNHPGG
Trigger: TCCTCCAGGATGGTTTCCCCATTCGGATAAAAGCAG...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp GGAAAAGAATTAAAGATGGTGACCCTGGGGGACGGGCTAGTAGCAGGAGTACAGATGTTTAAGAATCAGTaGGGACATTTTCCATGTCTT +
Preference number: 4 (lower is better)
Translates to: GKELKMVTLGDGLVAGVQMFKNQ*GHFPCL
Trigger: AAGACATGGAAAATGTCCCCACTGATTCTTAAACAT...CTGTACTCCTGCTACTAGCCCGTCCCCCAGGGTCACCATCTTTAATTCTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372906.2
CDS-3UTR CCA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTGACATGAAGCCAGGGTaGCACTTTTGGCTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: QYREVLPELTSFLNSRHVDMKPG*HFWLFL
Trigger: CAAAAACAGCCAAAAGTGCCACCCTGGCTTCATGTC...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp TCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTGAATCCATGAACTACTGCACCTaGCCAAGAGCAGAAGAATTT +
Preference number: 4 (lower is better)
Translates to: SQAVPPSCSLITRSKTESMNYCT*PRAEEF
Trigger: AAATTCTTCTGCTCTTGGCCAGGTGCAGTAGTTCAT...GGATTCAGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR CAA 72 bp GTTAGAAATTCAAGACATGAAGCCAGGGTGGCACTTTaGGCTGTTTTTGTAGATTTCATCCAGTCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: VRNSRHEARVAL*AVFVDFIQSLP
Trigger: GGGGAGAGACTGGATGAAATCTACAAAAACAGCCAAAAGTGCCACCCTGGCTTCATGTCTTGAATTTCTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp CATGGAGTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCCGGCTTCCACATTTaGCCACAAAGTGCTGCTTAT +
Preference number: 4 (lower is better)
Translates to: HGVIKVTKGLPQNGLMLISGFHI*PQSAAY
Trigger: ATAAGCAGCACTTTGTGGTCAAATGTGGAAGCCGGA...TATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTACTCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp TCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTGAATCCTTGAAACATCAGGGCTaGGTGATTCATTCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: SQAVPPSCSLITRSKTESLKHQG*VIHSSL
Trigger: TAAAGAGGAATGAATCACTCAGCCCTGATGTTTCAA...GGATTCAGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp CATGGAGTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATTGAAGCAAGGAATGTaGCCAGTGGCTGAAACAGTG +
Preference number: 4 (lower is better)
Translates to: HGVIKVTKGLPQNGLMLILKQGM*PVAETV
Trigger: CACTGTTTCAGCCACTGGTCACATTCCTTGCTTCAA...TATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTACTCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp ACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCACTGGCCAAACAATGTCACGAAGGGCCTaGACATCTCGAAGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: TLKVWPNYFIQVVLTGQTMSRRA*TSRSLH
Trigger: ATGGAGACTTCGAGATGTGCAGGCCCTTCGTGACAT...TGTTTGGCCAGTGAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp AAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTATTCACCACATGGACTaGTTTTATCCGAATGGGGAA +
Preference number: 4 (lower is better)
Translates to: KVTKGLPQNGLMLISQAVIHHMD*FYPNGE
Trigger: TTCCCCATTCGGATAAAAGCAGTCCATGTGGTGAAT...AACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp CATGGAGTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATACCCAAAATGGGCTCATaGTCATATCTCAGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: HGVIKVTKGLPQNGLMLIPKMGS*SYLRLF
Trigger: GAACAGCCTGAGATATGAGCATGAGCCCATTTTGGG...TATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTACTCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR GCA 90 bp CTCATATCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTATGATTCAGTTAAGGTaGTTTCCAAACCCGGTGACA +
Preference number: 4 (lower is better)
Translates to: LISQAVPPSCSLITRSKTMIQLR*FPNPVT
Trigger: TGTCACCGGGTTTGGAAAGCACCTTAACTGAATCAT...AGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGATATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp TCACATTTGGTCACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCTTCAGCCATCCCACTTaGCCTGCTTGGGCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: SHLVTLKVWPNYFIQVVLFSHPT*PAWAFS
Trigger: TGAAAAGGCCCAAGCAGGGCAAGTGGGATGGCTGAA...GAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGTGACCAAATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp TCACATTTGGTCACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCTGGTATCCATCTGTCTaGGCGGATGCAGACGACATG +
Preference number: 4 (lower is better)
Translates to: SHLVTLKVWPNYFIQVVLWYPSV*ADADDM
Trigger: CATGTCGTCTGCATCCGCCCAGACAGATGGATACCA...GAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGTGACCAAATGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp CTCATATCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTGGTTCATTCACCACATaGACTGCTTTTATCCGAATG +
Preference number: 4 (lower is better)
Translates to: LISQAVPPSCSLITRSKTGSFTT*TAFIRM
Trigger: CATTCGGATAAAAGCAGTCCATGTGGTGAATGAACC...AGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGATATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp GGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGCAGAGGTCTATACTTAGGGTCACACTGAAGGTTTaGCCAAATTATTTCATACAA +
Preference number: 4 (lower is better)
Translates to: GAFISSKFPDEQQRSILRVTLKV*PNYFIQ
Trigger: TTGTATGAAATAATTTGGCCAAACCTTCAGTGTGAC...CCTAAGTATAGACCTCTGCTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp GGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGCAGAGGTCTATACTTAGGTATAGATCTCTATCATaGAATCACTCAGGGATGTTA +
Preference number: 4 (lower is better)
Translates to: GAFISSKFPDEQQRSILRYRSLS*NHSGML
Trigger: TAACATCCCTGAGTGATTCCATGATAGAGATCTATA...CCTAAGTATAGACCTCTGCTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp GTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGAGGTTCTAAAGTGCTaGAATGCAGAACATTCAGGC +
Preference number: 4 (lower is better)
Translates to: VIKVTKGLPQNGLMLISQEVLKC*NAEHSG
Trigger: GCCTGAATGTTCTGCATTTCAGCACTTTAGAACCTC...CTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp GTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGAACATCAGGGCTGAGTaGTTCATTCCTCTTTACCCA +
Preference number: 4 (lower is better)
Translates to: VIKVTKGLPQNGLMLISQNIRAE*FIPLYP
Trigger: TGGGTAAAGAGGAATGAATCACTCAGCCCTGATGTT...CTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp TCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTGAATCCCTTGTGAAACCAGGATaGAATATGAAAGATCGAAAG +
Preference number: 4 (lower is better)
Translates to: SQAVPPSCSLITRSKTESLVKPG*NMKDRK
Trigger: CTTTCGATCTTTCATATTTCATCCTGGTTTCACAAG...GGATTCAGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTATTCACCACATGGACTaGTTTTATCCGAATGGGGAA +
Preference number: 4 (lower is better)
Translates to: QYREVLPELTSFLNSRHVIHHMD*FYPNGE
Trigger: TTCCCCATTCGGATAAAAGCAGTCCATGTGGTGAAT...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp CATGGAGTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATAGCTGTTCCTCCATCCTaGAGTTTAATTACAAGGAGC +
Preference number: 4 (lower is better)
Translates to: HGVIKVTKGLPQNGLMLIAVPPS*SLITRS
Trigger: GCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGC...TATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTACTCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR CCA 90 bp GTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGAGGCTTACCCCAAAATaGGCTCATGCTCATATCTCA +
Preference number: 4 (lower is better)
Translates to: VIKVTKGLPQNGLMLISQRLTPK*AHAHIS
Trigger: TGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCT...CTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR CCA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTGTGACACATCTCTCTTaGAAAGACACATGTACCACA +
Preference number: 4 (lower is better)
Translates to: QYREVLPELTSFLNSRHVVTHLS*KDTCTT
Trigger: TGTGGTACATGTGTCTTTCCAAGAGAGATGTGTCAC...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp CATGGAGTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCCAGAATTCCATGTTaGGATATGGGGGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: HGVIKVTKGLPQNGLMLISRIPC*DMGEEE
Trigger: CTCTTCTTCCCCCATATCCCAACATGGAATTCTGGA...TATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTACTCCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTATGAACTACTGCACCTaGCCAAGAGCAGAAGAATTT +
Preference number: 4 (lower is better)
Translates to: QYREVLPELTSFLNSRHVMNYCT*PRAEEF
Trigger: AAATTCTTCTGCTCTTGGCCAGGTGCAGTAGTTCAT...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp CATGGAGTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCCATCAGAGGCTCTTaGTCAGAGAGGTTTCAAGTA +
Preference number: 4 (lower is better)
Translates to: HGVIKVTKGLPQNGLMLISIRGS*SERFQV
Trigger: TACTTGAAACCTCTCTGACCAAGAGCCTCTGATGGA...TATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTACTCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR CAA 72 bp CAAACTCCCAGTCTCACATTTGGTCACACTGAAGGTTaGGCCAAATTATTTCATACAAGTAGTTCTCACTGG +
Preference number: 4 (lower is better)
Translates to: QTPSLTFGHTEG*AKLFHTSSSHW
Trigger: CCAGTGAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGTGACCAAATGTGAGACTGGGAGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp TCACATTTGGTCACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCCTTCTAGAAGCTGAGTaGAACCACTCCTTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: SHLVTLKVWPNYFIQVVLLLEAE*NHSFLV
Trigger: GACAAGGAAGGAGTGGTTTCACTCAGCTTCTAGAAG...GAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGTGACCAAATGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp AAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCTTGTGAAACCAGGATaGAATATGAAAGATCGAAAG +
Preference number: 4 (lower is better)
Translates to: KVTKGLPQNGLMLISQAVLVKPG*NMKDRK
Trigger: CTTTCGATCTTTCATATTTCATCCTGGTTTCACAAG...AACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp CTCATATCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTCTTAAATTCTCCTTGTaGCTCTCCAAAGAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: LISQAVPPSCSLITRSKTLKFSL*LSKEKK
Trigger: CTTCTTTTCTTTGGAGAGGCACAAGGAGAATTTAAG...AGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGATATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR GCA 90 bp ACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCACTGGCCAAACAAGCTGTGGCCATGCCTaGATTAAAACAAATGCGACT +
Preference number: 4 (lower is better)
Translates to: TLKVWPNYFIQVVLTGQTSCGHA*IKTNAT
Trigger: AGTCGCATTTGTTTTAATGCAGGCATGGCCACAGCT...TGTTTGGCCAGTGAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp ACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCACTGGCCAAACAAATTGGATAGTTGCTTaGTATCCATCTGTCTGGGCG +
Preference number: 4 (lower is better)
Translates to: TLKVWPNYFIQVVLTGQTNWIVA*YPSVWA
Trigger: CGCCCAGACAGATGGATACCAAGCAACTATCCAATT...TGTTTGGCCAGTGAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp CATGGAGTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATTCAAGTCAGACCCATaGAGGAAGAATCTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: HGVIKVTKGLPQNGLMLIFKSDP*RKNLFA
Trigger: AGCAAACAGATTCTTCCTCCATGGGTCTGACTTGAA...TATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTACTCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp GTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGTTCAAGTCAGACCCATaGAGGAAGAATCTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: VIKVTKGLPQNGLMLISQFKSDP*RKNLFA
Trigger: AGCAAACAGATTCTTCCTCCATGGGTCTGACTTGAA...CTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp ATTTACTGTCCCATTTCCTTCCGACACCACACTATCTTGAATTTAGGGAAAAGTCAGGCAGGAACAGGTTaGCAGAACTCTTTCACAAAA +
Preference number: 4 (lower is better)
Translates to: IYCPISFRHHTILNLGKSQAGTG*QNSFTK
Trigger: TTTTGTGAAAGAGTTCTGCCAACCTGTTCCTGCCTG...ACTTTTCCCTAAATTCAAGATAGTGTGGTGTCGGAAGGAAATGGGACAGTAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp TCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTGAATCCTATAGATCTCTATCATaGAATCACTCAGGGATGTTA +
Preference number: 4 (lower is better)
Translates to: SQAVPPSCSLITRSKTESYRSLS*NHSGML
Trigger: TAACATCCCTGAGTGATTCCATGATAGAGATCTATA...GGATTCAGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp CATGGAGTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATACTACCAAGGTCCCAATaGTTATCTCTTGGAACAGAA +
Preference number: 4 (lower is better)
Translates to: HGVIKVTKGLPQNGLMLILPRSQ*LSLGTE
Trigger: TTCTGTTCCAAGAGATAACCATTGGGACCTTGGTAG...TATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTACTCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372904.7
CDS-3UTR TCA 90 bp ATTTACTGTCCCATTTCCTTCCGACACCACACTATCTTGAATTTAGGGAAAAGTTACAAGGAGCAAGACTaGATCCATGGACCCTTAAAT +
Preference number: 4 (lower is better)
Translates to: IYCPISFRHHTILNLGKSYKEQD*IHGPLN
Trigger: ATTTAAGGGTCCATGGATTCAGTCTTGCTCCTTGTA...ACTTTTCCCTAAATTCAAGATAGTGTGGTGTCGGAAGGAAATGGGACAGTAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp GTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGCACATTTGGTCACACTaGAGGTTTGGCCAAATTATT +
Preference number: 4 (lower is better)
Translates to: VIKVTKGLPQNGLMLISQHIWSH*RFGQII
Trigger: AATAATTTGGCCAAACCTTCAGTGTGACCAAATGTG...CTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp TCACATTTGGTCACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCAACATCAGGGCTGAGTaGTTCATTCCTCTTTACCCA +
Preference number: 4 (lower is better)
Translates to: SHLVTLKVWPNYFIQVVLNIRAE*FIPLYP
Trigger: TGGGTAAAGAGGAATGAATCACTCAGCCCTGATGTT...GAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGTGACCAAATGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp CATGGAGTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATTGAAACATCAGGGCTaGGTGATTCATTCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: HGVIKVTKGLPQNGLMLILKHQG*VIHSSL
Trigger: TAAAGAGGAATGAATCACTCAGCCCTGATGTTTCAA...TATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTACTCCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp TCACATTTGGTCACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCGGTGTCAAAACTATCTaGTACCTCTTCGGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: SHLVTLKVWPNYFIQVVLGVKTI*YLFGAK
Trigger: TTTGGCTCCGAAGAGGTATCAGATAGTTTTGACACC...GAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGTGACCAAATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp ATTTACTGTCCCATTTCCTTCCGACACCACACTATCTTGAATTTAGGGAAAAGTACCCAGGGAGAATTCTaGAAGGCTCAATATAAAGGA +
Preference number: 4 (lower is better)
Translates to: IYCPISFRHHTILNLGKSTQGEF*KAQYKG
Trigger: TCCTTTATATTGAGCCTTTCAGAATTCTCCCTGGGT...ACTTTTCCCTAAATTCAAGATAGTGTGGTGTCGGAAGGAAATGGGACAGTAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp ACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCACTGGCCAAACAACCCAGGGAGAATTCTaGAAGGCTCAATATAAAGGA +
Preference number: 4 (lower is better)
Translates to: TLKVWPNYFIQVVLTGQTTQGEF*KAQYKG
Trigger: TCCTTTATATTGAGCCTTTCAGAATTCTCCCTGGGT...TGTTTGGCCAGTGAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp ATTTACTGTCCCATTTCCTTCCGACACCACACTATCTTGAATTTAGGGAAAAGTATGATTCAGTTAAGGTaGTTTCCAAACCCGGTGACA +
Preference number: 4 (lower is better)
Translates to: IYCPISFRHHTILNLGKSMIQLR*FPNPVT
Trigger: TGTCACCGGGTTTGGAAAGCACCTTAACTGAATCAT...ACTTTTCCCTAAATTCAAGATAGTGTGGTGTCGGAAGGAAATGGGACAGTAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp TCACATTTGGTCACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCAATGCACGGAGAAGGTaGACACACAACACAGTACTT +
Preference number: 4 (lower is better)
Translates to: SHLVTLKVWPNYFIQVVLNARRR*THNTVL
Trigger: AAGTACTGTGTTGTGTGTGCACCTTCTCCGTGCATT...GAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGTGACCAAATGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp TCACATTTGGTCACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCTTTGACACAGAATATTaGTTTGTCACCCAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: SHLVTLKVWPNYFIQVVLFDTEY*FVTQAG
Trigger: TCCCGCCTGGGTGACAAAGCAATATTCTGTGTCAAA...GAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGTGACCAAATGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp TCACATTTGGTCACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCCACTGGCCAAACAGGTaGTTTTTCTCCTGGAAAAGT +
Preference number: 4 (lower is better)
Translates to: SHLVTLKVWPNYFIQVVLHWPNR*FFSWKS
Trigger: ACTTTTCCAGGAGAAAAACCACCTGTTTGGCCAGTG...GAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGTGACCAAATGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp ATTTACTGTCCCATTTCCTTCCGACACCACACTATCTTGAATTTAGGGAAAAGTGTGACACATCTCTCTTaGAAAGACACATGTACCACA +
Preference number: 4 (lower is better)
Translates to: IYCPISFRHHTILNLGKSVTHLS*KDTCTT
Trigger: TGTGGTACATGTGTCTTTCCAAGAGAGATGTGTCAC...ACTTTTCCCTAAATTCAAGATAGTGTGGTGTCGGAAGGAAATGGGACAGTAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp GTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGATAAAAGGGCCAAAGTaGGATGCTTTTGATAAACTC +
Preference number: 4 (lower is better)
Translates to: VIKVTKGLPQNGLMLISQIKGPK*DAFDKL
Trigger: GAGTTTATCAAAAGCATCTCACTTTGGCCCTTTTAT...CTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp TCACATTTGGTCACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCGAAAATTGGTGTCAGTaGGTCCCAGGAATACACATA +
Preference number: 4 (lower is better)
Translates to: SHLVTLKVWPNYFIQVVLENWCQ*VPGIHI
Trigger: TATGTGTATTCCTGGGACTCACTGACACCAATTTTC...GAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGTGACCAAATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp ATTTACTGTCCCATTTCCTTCCGACACCACACTATCTTGAATTTAGGGAAAAGTACTGAGCTGTCTGCTTaGCTGGTTAGTCTAATAAAT +
Preference number: 4 (lower is better)
Translates to: IYCPISFRHHTILNLGKSTELSA*LVSLIN
Trigger: ATTTATTAGACTAACCAGTCAAGCAGACAGCTCAGT...ACTTTTCCCTAAATTCAAGATAGTGTGGTGTCGGAAGGAAATGGGACAGTAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp ACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCACTGGCCAAACAAGAAAAACAGCCCCATaGAACAGGAATTTCATCACT +
Preference number: 4 (lower is better)
Translates to: TLKVWPNYFIQVVLTGQTRKTAP*NRNFIT
Trigger: AGTGATGAAATTCCTGTTTCATGGGGCTGTTTTTCT...TGTTTGGCCAGTGAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp ATTTACTGTCCCATTTCCTTCCGACACCACACTATCTTGAATTTAGGGAAAAGTCTCCAGATTAATAGTTaGAGACTGGGATTCCAAATG +
Preference number: 4 (lower is better)
Translates to: IYCPISFRHHTILNLGKSLQINS*RLGFQM
Trigger: CATTTGGAATCCCAGTCTGCAACTATTAATCTGGAG...ACTTTTCCCTAAATTCAAGATAGTGTGGTGTCGGAAGGAAATGGGACAGTAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp ACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCACTGGCCAAACATTTCTCCTGGAAAAGTaGGATCAAAGTGACTTTGGT +
Preference number: 4 (lower is better)
Translates to: TLKVWPNYFIQVVLTGQTFLLEK*DQSDFG
Trigger: ACCAAAGTCACTTTGATCCCACTTTTCCAGGAGAAA...TGTTTGGCCAGTGAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp TCACATTTGGTCACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCACAAGTAGTTCTCACTaGCCAAACAGGTGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: SHLVTLKVWPNYFIQVVLTSSSH*PNRWFF
Trigger: GAAAAACCACCTGTTTGGCCAGTGAGAACTACTTGT...GAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGTGACCAAATGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR CAA 72 bp GAAATAGGTCAAAAACCATCATGTGAACCGTCTAATTaGATGTTTGGGCTAAGGCTAAAATCTTCACAGGGA +
Preference number: 4 (lower is better)
Translates to: EIGQKPSCEPSN*MFGLRLKSSQG
Trigger: TCCCTGTGAAGATTTTAGCCTTAGCCCAAACATCAAATTAGACGGTTCACATGATGGTTTTTGACCTATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
3UTR CAA 72 bp TATCTTGAATTTAGGGAAAAGTTAATTTCCAAGTGTTaGTGCAATGGGCCAGAACTTCTCCCTGAAGGAACA +
Preference number: 4 (lower is better)
Translates to: YLEFREKLISKC*CNGPELLPEGT
Trigger: TGTTCCTTCAGGGAGAAGTTCTGGCCCATTGCACAAACACTTGGAAATTAACTTTTCCCTAAATTCAAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp ACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCACTGGCCAAACAATAAAAGGGCCAAAGTaGGATGCTTTTGATAAACTC +
Preference number: 4 (lower is better)
Translates to: TLKVWPNYFIQVVLTGQTIKGPK*DAFDKL
Trigger: GAGTTTATCAAAAGCATCTCACTTTGGCCCTTTTAT...TGTTTGGCCAGTGAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp ACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCACTGGCCAAACATCCAGCATTTTAGGTTaGGTAAAATCATTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: TLKVWPNYFIQVVLTGQTSSILG*VKSFPA
Trigger: AGCAGGAAATGATTTTACTCAACCTAAAATGCTGGA...TGTTTGGCCAGTGAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR TCA 90 bp TCACATTTGGTCACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCACTGAGCTGTCTGCTTaGCTGGTTAGTCTAATAAAT +
Preference number: 4 (lower is better)
Translates to: SHLVTLKVWPNYFIQVVLTELSA*LVSLIN
Trigger: ATTTATTAGACTAACCAGTCAAGCAGACAGCTCAGT...GAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGTGACCAAATGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp ATTTACTGTCCCATTTCCTTCCGACACCACACTATCTTGAATTTAGGGAAAAGTATCGAAAGCTACTTTTaGCTTAATTTTTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: IYCPISFRHHTILNLGKSIESYF*LNFCSS
Trigger: GCTGCTGCAAAAATTAAGGCAAAAGTAGCTTTCGAT...ACTTTTCCCTAAATTCAAGATAGTGTGGTGTCGGAAGGAAATGGGACAGTAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CCA 90 bp GTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGATGTTTAAGAATCAGTaGGGACATTTTCCATGTCTT +
Preference number: 4 (lower is better)
Translates to: VIKVTKGLPQNGLMLISQMFKNQ*GHFPCL
Trigger: AAGACATGGAAAATGTCCCCACTGATTCTTAAACAT...CTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR GCA 90 bp TCACATTTGGTCACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCATCGAAAGCTACTTTTaGCTTAATTTTTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SHLVTLKVWPNYFIQVVLIESYF*LNFCSS
Trigger: GCTGCTGCAAAAATTAAGGCAAAAGTAGCTTTCGAT...GAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGTGACCAAATGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR GCA 90 bp TCACATTTGGTCACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCAACTTAAGTTTCTATTaGAAACTTCAACCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: SHLVTLKVWPNYFIQVVLNLSFY*KLQPVG
Trigger: ACCCACTGGTTGAAGTTTGCAATAGAAACTTAAGTT...GAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGTGACCAAATGTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS GCA 90 bp TGCGGGCTCGGAGGAAGCGCAGCAGGAAGGCATCGTCGAGGGATGTaGTCAGGTTGGGGTACTCCTTCCGCACCATGTCACGAAGGGCCT +
Preference number: 5 (lower is better)
Translates to: CGLGGSAAGRHRRGM*SGWGTPSAPCHEGP
Trigger: AGGCCCTTCGTGACATGGTGCGGAAGGAGTACCCCAACCTGAGCACATCCCTCGACGATGCCTTCCTGCTGCGCTTCCTCCGAGCCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
ENST00000456317.1
CDS CCA 90 bp GGAGGAAGCGCAGCAGGAAGGCATCGTCGAGGGATGTGCTCAGGTTaGGGTACTCCTTCCGCACCATGTCACGAAGGGCCTGCACATCTC +
Preference number: 5 (lower is better)
Translates to: GGSAAGRHRRGMCSG*GTPSAPCHEGPAHL
Trigger: GAGATGTGCAGGCCCTTCGTGACATGGTGCGGAAGGAGTACCCCAACCTGAGCACATCCCTCGACGATGCCTTCCTGCTGCGCTTCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
ENST00000456317.1
CDS-3UTR CAA 90 bp AGCTGTGACTTCACAGCTCGCAAGGAGTCGTCACACTGTGCATCTGAGGTCAGGAGGGATGTGCTCAGGTaGGGGTACTCCTTCCGCACC +
Preference number: 5 (lower is better)
Translates to: SCDFTARKESSHCASEVRRDVLR*GYSFRT
Trigger: GGTGCGGAAGGAGTACCCCAACCTGAGCACATCCCT...CCTGACCTCAGATGCACAGTGTGACGACTCCTTGCGAGCTGTGAAGTCACAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372906.2
CDS-3UTR CAA 90 bp GCCAGGAGTGCTTTTTGGCACTTCCAGCTCAGCCAGTACCGTAGAGGATCCAGGTGCAGTGGCATAGTCTaGGCTTACTGCAACCGCTGC +
Preference number: 5 (lower is better)
Translates to: ARSAFWHFQLSQYRRGSRCSGIV*AYCNRC
Trigger: GCAGCGGTTGCAGTAAGCCAAGACTATGCCACTGCA...CCTGGATCCTCTACGGTACTGGCTGAGCTGGAAGTGCCAAAAAGCACTCCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp AACCCGGTGACAACAGCTGGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGAGCTCTTCCCGGGCTTaGGTGACCAGGTCTTCTGTC +
Preference number: 5 (lower is better)
Translates to: NPVTTAGAFISSKFPDEQSSSRA*VTRSSV
Trigger: GACAGAAGACCTGGTCACCAAAGCCCGGGAAGAGCT...CTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCCAGCTGTTGTCACCGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp GCCAGGAGTGCTTTTTGGCACTTCCAGCTCAGCCAGTACCGTAGAGGATCCAGGCACAAGGAGACCACCTaGATTTTCACGCAGGGAGGT +
Preference number: 5 (lower is better)
Translates to: ARSAFWHFQLSQYRRGSRHKETT*IFTQGG
Trigger: ACCTCCCTGCGTGAAAATCAAGGTGGTCTCCTTGTG...CCTGGATCCTCTACGGTACTGGCTGAGCTGGAAGTGCCAAAAAGCACTCCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp AACCCGGTGACAACAGCTGGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGTTGAGGTTCATGGGTTaGCCTCACCAGTGCGCTCCC +
Preference number: 5 (lower is better)
Translates to: NPVTTAGAFISSKFPDEQLRFMG*PHQCAP
Trigger: GGGAGCGCACTGGTGAGGCAAACCCATGAACCTCAA...CTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCCAGCTGTTGTCACCGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp AGGGATGTTAAGCCAGCTCATCAAAGGCCACGTAGTAAGGTAAAGGTGGAGCCCAGCTCTTCCCGGGCTTaGGTGACCAGGTCTTCTGTC +
Preference number: 5 (lower is better)
Translates to: RDVKPAHQRPRSKVKVEPSSSRA*VTRSSV
Trigger: GACAGAAGACCTGGTCACCAAAGCCCGGGAAGAGCT...GGGCTCCACCTTTACCTTACTACGTGGCCTTTGATGAGCTGGCTTAACATCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp GCCAGGAGTGCTTTTTGGCACTTCCAGCTCAGCCAGTACCGTAGAGGATCCAGGCTCCCAGTCTCACATTaGGTCACACTGAAGGTTTGG +
Preference number: 5 (lower is better)
Translates to: ARSAFWHFQLSQYRRGSRLPVSH*VTLKVW
Trigger: CCAAACCTTCAGTGTGACCAAATGTGAGACTGGGAG...CCTGGATCCTCTACGGTACTGGCTGAGCTGGAAGTGCCAAAAAGCACTCCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp AACCCGGTGACAACAGCTGGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGTATCTGTCTTCCCTCTaGGGGAAGCCTCCACCCAGT +
Preference number: 5 (lower is better)
Translates to: NPVTTAGAFISSKFPDEQYLSSL*GKPPPS
Trigger: ACTGGGTGGAGGCTTCCCCAAGAGGGAAGACAGATA...CTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCCAGCTGTTGTCACCGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp TCACAAAATCGTCTTCTGAAGCCAGCAGTACCGCGTTCCAGGTGGCAGTGTCCATGGGGAGGATGCTTCTaGGAAGGTTTGTGTGGAGAG +
Preference number: 5 (lower is better)
Translates to: SQNRLLKPAVPRSRWQCPWGGCF*EGLCGE
Trigger: CTCTCCACACAAACCTTCCAAGAAGCATCCTCCCCA...TGGACACTGCCACCTGGAACGCGGTACTGCTGGCTTCAGAAGACGATTTTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372906.2
CDS-3UTR CAA 90 bp CCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATGGTCCCAGAGGTGCTTaGAAGTCTCCGGCTTCCACA +
Preference number: 5 (lower is better)
Translates to: PKAYPKMGSCSYLRLFLHGPRGA*KSPAST
Trigger: TGTGGAAGCCGGAGACTTCAAAGCACCTCTGGGACC...ATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp AGGGATGTTAAGCCAGCTCATCAAAGGCCACGTAGTAAGGTAAAGGTGGAGCCCAGCCAGGAGTGCTTTTaGGCACTTCCAGCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: RDVKPAHQRPRSKVKVEPSQECF*ALPAQP
Trigger: TGGCTGAGCTGGAAGTGCCAAAAAGCACTCCTGGCT...GGGCTCCACCTTTACCTTACTACGTGGCCTTTGATGAGCTGGCTTAACATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp GGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGCAGAGGTCTATACTTAGGCTTCAGCCATCCCACTaGCCCTGCTTGGGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: GAFISSKFPDEQQRSILRLQPSH*PCLGLF
Trigger: GAAAAGGCCCAAGCAGGGCAAGTGGGATGGCTGAAG...CCTAAGTATAGACCTCTGCTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp GGGCCAGAACTTCTCCCTGAAGGAACATACTCCCAGTTCTTGAGGTTCATGGGTCACAAGGAGACCACCTaGATTTTCACGCAGGGAGGT +
Preference number: 5 (lower is better)
Translates to: GPELLPEGTYSQFLRFMGHKETT*IFTQGG
Trigger: ACCTCCCTGCGTGAAAATCAAGGTGGTCTCCTTGTG...ACCCATGAACCTCAAGAACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp TCACAAAATCGTCTTCTGAAGCCAGCAGTACCGCGTTCCAGGTGGCAGTGTCCAACAGGCAGGAACAGGTaGGCAGAACTCTTTCACAAA +
Preference number: 5 (lower is better)
Translates to: SQNRLLKPAVPRSRWQCPTGRNR*AELFHK
Trigger: TTTGTGAAAGAGTTCTGCCAACCTGTTCCTGCCTGT...TGGACACTGCCACCTGGAACGCGGTACTGCTGGCTTCAGAAGACGATTTTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372906.2
CDS-3UTR CAA 90 bp GCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCCTGCACTCCCAGTCTCACATTaGGTCACACTGAAGGTTTGG +
Preference number: 5 (lower is better)
Translates to: AYPKMGSCSYLRLFLHPALPVSH*VTLKVW
Trigger: CCAAACCTTCAGTGTGACCAAATGTGAGACTGGGAG...TGCAGGATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp GCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCCTGCACTCCGGCTTCCACATTaGACCACAAAGTGCTGCTTA +
Preference number: 5 (lower is better)
Translates to: AYPKMGSCSYLRLFLHPALRLPH*TTKCCL
Trigger: TAAGCAGCACTTTGTGGTCAAATGTGGAAGCCGGAG...TGCAGGATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTAGGGATGTGCTCAGGTaGGGGTACTCCTTCCGCACC +
Preference number: 5 (lower is better)
Translates to: QYREVLPELTSFLNSRHVRDVLR*GYSFRT
Trigger: GGTGCGGAAGGAGTACCCCAACCTGAGCACATCCCT...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp AACCCGGTGACAACAGCTGGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGTGCTTCTTGGAAGGTTaGTGTGGAGAGAGTTCAAGT +
Preference number: 5 (lower is better)
Translates to: NPVTTAGAFISSKFPDEQCFLEG*CGESSS
Trigger: ACTTGAACTCTCTCCACACAAACCTTCCAAGAAGCA...CTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCCAGCTGTTGTCACCGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp CCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATAGGTCCCTGATTCTATaGAGAACCAGGGCTAAGGCT +
Preference number: 5 (lower is better)
Translates to: PKAYPKMGSCSYLRLFLHRSLIL*RTRAKA
Trigger: AGCCTTAGCCCTGGTTCTCAATAGAATCAGGGACCT...ATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp GCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCCTGCAAGGAATAACCTGCCCTaGTGTTCATTTCCAGAGACC +
Preference number: 5 (lower is better)
Translates to: AYPKMGSCSYLRLFLHPARNNLP*CSFPET
Trigger: GGTCTCTGGAAATGAACACAAGGGCAGGTTATTCCT...TGCAGGATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp AAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCTTCAGCCATCCCACTaGCCCTGCTTGGGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: KVTKGLPQNGLMLISQAVLQPSH*PCLGLF
Trigger: GAAAAGGCCCAAGCAGGGCAAGTGGGATGGCTGAAG...AACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp TCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTGAATCCTATCTGTCTTCCCTCTaGGGGAAGCCTCCACCCAGT +
Preference number: 5 (lower is better)
Translates to: SQAVPPSCSLITRSKTESYLSSL*GKPPPS
Trigger: ACTGGGTGGAGGCTTCCCCAAGAGGGAAGACAGATA...GGATTCAGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp CAGCAGCATCTCACTGCCTCACTAAACCTGCTGCCCAGTGAGATGAAAAGAAAATCACGCAGGGAGGTCTaGGTTTCACAGCTTGGTTCA +
Preference number: 5 (lower is better)
Translates to: QQHLTASLNLLPSEMKRKSRREV*VSQLGS
Trigger: TGAACCAAGCTGTGAAACCAAGACCTCCCTGCGTGA...TTTTCTTTTCATCTCACTGGGCAGCAGGTTTAGTGAGGCAGTGAGATGCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp GCCAGGAGTGCTTTTTGGCACTTCCAGCTCAGCCAGTACCGTAGAGGATCCAGGTTAATTTCCAAGTGTTaGTGCAATGGGCCAGAACTT +
Preference number: 5 (lower is better)
Translates to: ARSAFWHFQLSQYRRGSRLISKC*CNGPEL
Trigger: AAGTTCTGGCCCATTGCACAAACACTTGGAAATTAA...CCTGGATCCTCTACGGTACTGGCTGAGCTGGAAGTGCCAAAAAGCACTCCTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp AGGGATGTTAAGCCAGCTCATCAAAGGCCACGTAGTAAGGTAAAGGTGGAGCCCGCCAGGGTGGCACTTTaGGCTGTTTTTGTAGATTTC +
Preference number: 5 (lower is better)
Translates to: RDVKPAHQRPRSKVKVEPARVAL*AVFVDF
Trigger: GAAATCTACAAAAACAGCCAAAAGTGCCACCCTGGC...GGGCTCCACCTTTACCTTACTACGTGGCCTTTGATGAGCTGGCTTAACATCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp CCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATGATGGCTTCAAGTTATaGAAGACTTCGGGCCAGCTT +
Preference number: 5 (lower is better)
Translates to: PKAYPKMGSCSYLRLFLHDGFKL*KTSGQL
Trigger: AAGCTGGCCCGAAGTCTTCAATAACTTGAAGCCATC...ATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR CAA 90 bp GCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCCTGCATGCTTCTTGGAAGGTTaGTGTGGAGAGAGTTCAAGT +
Preference number: 5 (lower is better)
Translates to: AYPKMGSCSYLRLFLHPACFLEG*CGESSS
Trigger: ACTTGAACTCTCTCCACACAAACCTTCCAAGAAGCA...TGCAGGATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR CAA 90 bp GGAAAAGAATTAAAGATGGTGACCCTGGGGGACGGGCTAGTAGCAGGAGTACAGTGCTTCTTGGAAGGTTaGTGTGGAGAGAGTTCAAGT +
Preference number: 5 (lower is better)
Translates to: GKELKMVTLGDGLVAGVQCFLEG*CGESSS
Trigger: ACTTGAACTCTCTCCACACAAACCTTCCAAGAAGCA...CTGTACTCCTGCTACTAGCCCGTCCCCCAGGGTCACCATCTTTAATTCTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372906.2
CDS-3UTR CAA 90 bp AGGGATGTTAAGCCAGCTCATCAAAGGCCACGTAGTAAGGTAAAGGTGGAGCCCGGGATCAAAGTGACTTaGGTCCTGATTGTTCTTGCT +
Preference number: 5 (lower is better)
Translates to: RDVKPAHQRPRSKVKVEPGIKVT*VLIVLA
Trigger: AGCAAGAACAATCAGGACCAAAGTCACTTTGATCCC...GGGCTCCACCTTTACCTTACTACGTGGCCTTTGATGAGCTGGCTTAACATCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp CCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATGTAGAGGCCCATATCTaGTCCATAGTTGTACACCTG +
Preference number: 5 (lower is better)
Translates to: PKAYPKMGSCSYLRLFLHVEAHI*SIVVHL
Trigger: CAGGTGTACAACTATGGACAAGATATGGGCCTCTAC...ATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp GGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGCAGAGGTCTATACTTAGGGGTGACACATCTCTCTaGGAAAGACACATGTACCAC +
Preference number: 5 (lower is better)
Translates to: GAFISSKFPDEQQRSILRGDTSL*ERHMYH
Trigger: GTGGTACATGTGTCTTTCCAAGAGAGATGTGTCACC...CCTAAGTATAGACCTCTGCTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp GGGCCAGAACTTCTCCCTGAAGGAACATACTCCCAGTTCTTGAGGTTCATGGGTTTCCAGAATTCCATGTaGGGATATGGGGGAAGAAGA +
Preference number: 5 (lower is better)
Translates to: GPELLPEGTYSQFLRFMGFQNSM*GYGGRR
Trigger: TCTTCTTCCCCCATATCCCAACATGGAATTCTGGAA...ACCCATGAACCTCAAGAACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp CATGGAGTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATAAGCTCTTCCCGGGCTTaGGTGACCAGGTCTTCTGTC +
Preference number: 5 (lower is better)
Translates to: HGVIKVTKGLPQNGLMLISSSRA*VTRSSV
Trigger: GACAGAAGACCTGGTCACCAAAGCCCGGGAAGAGCT...TATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTACTCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR CAA 90 bp CAGCAGCATCTCACTGCCTCACTAAACCTGCTGCCCAGTGAGATGAAAAGAAAAGATGGCTTCAAGTTATaGAAGACTTCGGGCCAGCTT +
Preference number: 5 (lower is better)
Translates to: QQHLTASLNLLPSEMKRKDGFKL*KTSGQL
Trigger: AAGCTGGCCCGAAGTCTTCAATAACTTGAAGCCATC...TTTTCTTTTCATCTCACTGGGCAGCAGGTTTAGTGAGGCAGTGAGATGCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp GTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGTTGAGGTTCATGGGTTaGCCTCACCAGTGCGCTCCC +
Preference number: 5 (lower is better)
Translates to: VIKVTKGLPQNGLMLISQLRFMG*PHQCAP
Trigger: GGGAGCGCACTGGTGAGGCAAACCCATGAACCTCAA...CTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp GCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCCTGCACATCCACAAATCACATaGATCCTTCGCATGAAGCAA +
Preference number: 5 (lower is better)
Translates to: AYPKMGSCSYLRLFLHPAHPQIT*ILRMKQ
Trigger: TTGCTTCATGCGAAGGATCAATGTGATTTGTGGATG...TGCAGGATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp AACCCGGTGACAACAGCTGGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGCAAAGTGAGATGCTTTaGATAAACTCACTCCTTTGT +
Preference number: 5 (lower is better)
Translates to: NPVTTAGAFISSKFPDEQQSEML*INSLLC
Trigger: ACAAAGGAGTGAGTTTATCAAAAGCATCTCACTTTG...CTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCCAGCTGTTGTCACCGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp GGGCCAGAACTTCTCCCTGAAGGAACATACTCCCAGTTCTTGAGGTTCATGGGTGGTCACACTGAAGGTTaGGCCAAATTATTTCATACA +
Preference number: 5 (lower is better)
Translates to: GPELLPEGTYSQFLRFMGGHTEG*AKLFHT
Trigger: TGTATGAAATAATTTGGCCAAACCTTCAGTGTGACC...ACCCATGAACCTCAAGAACTGGGAGTATGTTCCTTCAGGGAGAAGTTCTGGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp AACCCGGTGACAACAGCTGGGGCCTTCATCTCCAGTAAGTTTCCTGATGAGCAGCTTAGTAACAACAGATaGGCCTTCAAATTTCAGAGT +
Preference number: 5 (lower is better)
Translates to: NPVTTAGAFISSKFPDEQLSNNR*AFKFQS
Trigger: ACTCTGAAATTTGAAGGCCAATCTGTTGTTACTAAG...CTGCTCATCAGGAAACTTACTGGAGATGAAGGCCCCAGCTGTTGTCACCGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp GTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGAGCCAGGAGTGCTTTTaGGCACTTCCAGCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: VIKVTKGLPQNGLMLISQSQECF*ALPAQP
Trigger: TGGCTGAGCTGGAAGTGCCAAAAAGCACTCCTGGCT...CTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp CCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTCCTCCATCATCCACAAATCACATaGATCCTTCGCATGAAGCAA +
Preference number: 5 (lower is better)
Translates to: PKAYPKMGSCSYLRLFLHHPQIT*ILRMKQ
Trigger: TTGCTTCATGCGAAGGATCAATGTGATTTGTGGATG...ATGGAGGAACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp CTCATATCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTCTCCATCAGAGGCTCTaGGTCAGAGAGGTTTCAAGT +
Preference number: 5 (lower is better)
Translates to: LISQAVPPSCSLITRSKTLHQRL*VREVSS
Trigger: ACTTGAAACCTCTCTGACCAAGAGCCTCTGATGGAG...AGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGATATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS CCA 90 bp GCTGCTCTTACAGCAGAAAACAGTCTGAGTCTACAGGGACAGATCTaGCAAATACCAGACCTTCCAGATCAGTGTTGCCCAAAGTATATT +
Preference number: 5 (lower is better)
Translates to: AALTAENSLSLQGQI*QIPDLPDQCCPKYI
Trigger: AATATACTTTGGGCAACACTGATCTGGAAGGTCTGGTATTTGCCAGATCTGTCCCTGTAGACTCAGACTGTTTTCTGCTGTAAGAGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461134.1
CDS-3UTR CAA 90 bp CATGGAGTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATGGGGAGGATGCTTCTaGGAAGGTTTGTGTGGAGAG +
Preference number: 5 (lower is better)
Translates to: HGVIKVTKGLPQNGLMLIWGGCF*EGLCGE
Trigger: CTCTCCACACAAACCTTCCAAGAAGCATCCTCCCCA...TATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTACTCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR CAA 90 bp AAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTACAGGCAGGAACAGGTaGGCAGAACTCTTTCACAAA +
Preference number: 5 (lower is better)
Translates to: KVTKGLPQNGLMLISQAVTGRNR*AELFHK
Trigger: TTTGTGAAAGAGTTCTGCCAACCTGTTCCTGCCTGT...AACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR CAA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTAGGTCCCTGATTCTATaGAGAACCAGGGCTAAGGCT +
Preference number: 5 (lower is better)
Translates to: QYREVLPELTSFLNSRHVRSLIL*RTRAKA
Trigger: AGCCTTAGCCCTGGTTCTCAATAGAATCAGGGACCT...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp CTCATATCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTGGTGACACATCTCTCTaGGAAAGACACATGTACCAC +
Preference number: 5 (lower is better)
Translates to: LISQAVPPSCSLITRSKTGDTSL*ERHMYH
Trigger: GTGGTACATGTGTCTTTCCAAGAGAGATGTGTCACC...AGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGATATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp ATTTACTGTCCCATTTCCTTCCGACACCACACTATCTTGAATTTAGGGAAAAGTTGCAGTGGCATAGTCTaGGCTTACTGCAACCGCTGC +
Preference number: 5 (lower is better)
Translates to: IYCPISFRHHTILNLGKSCSGIV*AYCNRC
Trigger: GCAGCGGTTGCAGTAAGCCAAGACTATGCCACTGCA...ACTTTTCCCTAAATTCAAGATAGTGTGGTGTCGGAAGGAAATGGGACAGTAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp ATTTACTGTCCCATTTCCTTCCGACACCACACTATCTTGAATTTAGGGAAAAGTTGGGGAGGATGCTTCTaGGAAGGTTTGTGTGGAGAG +
Preference number: 5 (lower is better)
Translates to: IYCPISFRHHTILNLGKSWGGCF*EGLCGE
Trigger: CTCTCCACACAAACCTTCCAAGAAGCATCCTCCCCA...ACTTTTCCCTAAATTCAAGATAGTGTGGTGTCGGAAGGAAATGGGACAGTAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp CTCATATCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTGGGATCAAAGTGACTTaGGTCCTGATTGTTCTTGCT +
Preference number: 5 (lower is better)
Translates to: LISQAVPPSCSLITRSKTGIKVT*VLIVLA
Trigger: AGCAAGAACAATCAGGACCAAAGTCACTTTGATCCC...AGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGATATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp CATGGAGTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATAGATGGCTTCAAGTTATaGAAGACTTCGGGCCAGCTT +
Preference number: 5 (lower is better)
Translates to: HGVIKVTKGLPQNGLMLIDGFKL*KTSGQL
Trigger: AAGCTGGCCCGAAGTCTTCAATAACTTGAAGCCATC...TATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTACTCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR CAA 90 bp AAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGGCTGTTACCCTTAAATTCTCCTaGTGCCTCTCCAAAGAAAAG +
Preference number: 5 (lower is better)
Translates to: KVTKGLPQNGLMLISQAVTLKFS*CLSKEK
Trigger: CTTTTCTTTGGAGAGGCACAAGGAGAATTTAAGGGT...AACAGCCTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
CDS-3UTR CAA 90 bp ACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCACTGGCCAAACACTCCGGCTTCCACATTaGACCACAAAGTGCTGCTTA +
Preference number: 5 (lower is better)
Translates to: TLKVWPNYFIQVVLTGQTLRLPH*TTKCCL
Trigger: TAAGCAGCACTTTGTGGTCAAATGTGGAAGCCGGAG...TGTTTGGCCAGTGAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp GTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGAGGAATAACCTGCCCTaGTGTTCATTTCCAGAGACC +
Preference number: 5 (lower is better)
Translates to: VIKVTKGLPQNGLMLISQRNNLP*CSFPET
Trigger: GGTCTCTGGAAATGAACACAAGGGCAGGTTATTCCT...CTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp ATTTACTGTCCCATTTCCTTCCGACACCACACTATCTTGAATTTAGGGAAAAGTACAGGCAGGAACAGGTaGGCAGAACTCTTTCACAAA +
Preference number: 5 (lower is better)
Translates to: IYCPISFRHHTILNLGKSTGRNR*AELFHK
Trigger: TTTGTGAAAGAGTTCTGCCAACCTGTTCCTGCCTGT...ACTTTTCCCTAAATTCAAGATAGTGTGGTGTCGGAAGGAAATGGGACAGTAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTACCCTTAAATTCTCCTaGTGCCTCTCCAAAGAAAAG +
Preference number: 5 (lower is better)
Translates to: QYREVLPELTSFLNSRHVTLKFS*CLSKEK
Trigger: CTTTTCTTTGGAGAGGCACAAGGAGAATTTAAGGGT...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp CTCATATCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTGGTCACACTGAAGGTTaGGCCAAATTATTTCATACA +
Preference number: 5 (lower is better)
Translates to: LISQAVPPSCSLITRSKTGHTEG*AKLFHT
Trigger: TGTATGAAATAATTTGGCCAAACCTTCAGTGTGACC...AGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGATATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp ACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCACTGGCCAAACAGTAGAGGCCCATATCTaGTCCATAGTTGTACACCTG +
Preference number: 5 (lower is better)
Translates to: TLKVWPNYFIQVVLTGQTVEAHI*SIVVHL
Trigger: CAGGTGTACAACTATGGACAAGATATGGGCCTCTAC...TGTTTGGCCAGTGAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp ATTTACTGTCCCATTTCCTTCCGACACCACACTATCTTGAATTTAGGGAAAAGTGCCAGGGTGGCACTTTaGGCTGTTTTTGTAGATTTC +
Preference number: 5 (lower is better)
Translates to: IYCPISFRHHTILNLGKSARVAL*AVFVDF
Trigger: GAAATCTACAAAAACAGCCAAAAGTGCCACCCTGGC...ACTTTTCCCTAAATTCAAGATAGTGTGGTGTCGGAAGGAAATGGGACAGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS GCA 90 bp CTACAGGGACAGATCTGGCAAATACCAGACCTTCCAGATCAGTGTTaGCCAAAGTATATTTCTCAGGCTATTAGAGGTTATATAAAACAG +
Preference number: 5 (lower is better)
Translates to: LQGQIWQIPDLPDQC*PKYISQAIRGYIKQ
Trigger: CTGTTTTATATAACCTCTAATAGCCTGAGAAATATACTTTGGGCAACACTGATCTGGAAGGTCTGGTATTTGCCAGATCTGTCCCTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461134.1
CDS-3UTR CAA 90 bp CTCATATCTCAGGCTGTTCCTCCATCCTGCAGTTTAATTACAAGGAGCAAGACTACAGGATCCAACCACTaGTATCTAGATAGTTATCTT +
Preference number: 5 (lower is better)
Translates to: LISQAVPPSCSLITRSKTTGSNH*YLDSYL
Trigger: AAGATAACTATCTAGATACAAGTGGTTGGATCCTGT...AGTCTTGCTCCTTGTAATTAAACTGCAGGATGGAGGAACAGCCTGAGATATGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp GTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGTGTGAACCGTCTAATTaGATGTTTGGGCTAAGGCTA +
Preference number: 5 (lower is better)
Translates to: VIKVTKGLPQNGLMLISQCEPSN*MFGLRL
Trigger: TAGCCTTAGCCCAAACATCAAATTAGACGGTTCACA...CTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp ACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCACTGGCCAAACAGAAACCACTCCTTCCTaGTCCAACTGGAAAAACCTA +
Preference number: 5 (lower is better)
Translates to: TLKVWPNYFIQVVLTGQTETTPS*SNWKNL
Trigger: TAGGTTTTTCCAGTTGGACAAGGAAGGAGTGGTTTC...TGTTTGGCCAGTGAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp ACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCACTGGCCAAACATTCCAGAATTCCATGTaGGGATATGGGGGAAGAAGA +
Preference number: 5 (lower is better)
Translates to: TLKVWPNYFIQVVLTGQTFQNSM*GYGGRR
Trigger: TCTTCTTCCCCCATATCCCAACATGGAATTCTGGAA...TGTTTGGCCAGTGAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp CAATACAGAGAGGTGTTACCAGAACTGACATCTTTCCTGAACAGTAGGCATGTTGGAGGAAGAATCTGTTaGCTATTTTCTCCTTTAGAA +
Preference number: 5 (lower is better)
Translates to: QYREVLPELTSFLNSRHVGGRIC*LFSPLE
Trigger: TTCTAAAGGAGAAAATAGCAAACAGATTCTTCCTCC...AACATGCCTACTGTTCAGGAAAGATGTCAGTTCTGGTAACACCTCTCTGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp ATTTACTGTCCCATTTCCTTCCGACACCACACTATCTTGAATTTAGGGAAAAGTTGTGAACCGTCTAATTaGATGTTTGGGCTAAGGCTA +
Preference number: 5 (lower is better)
Translates to: IYCPISFRHHTILNLGKSCEPSN*MFGLRL
Trigger: TAGCCTTAGCCCAAACATCAAATTAGACGGTTCACA...ACTTTTCCCTAAATTCAAGATAGTGTGGTGTCGGAAGGAAATGGGACAGTAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp TCACATTTGGTCACACTGAAGGTTTGGCCAAATTATTTCATACAAGTAGTTCTCGAAACCACTCCTTCCTaGTCCAACTGGAAAAACCTA +
Preference number: 5 (lower is better)
Translates to: SHLVTLKVWPNYFIQVVLETTPS*SNWKNL
Trigger: TAGGTTTTTCCAGTTGGACAAGGAAGGAGTGGTTTC...GAGAACTACTTGTATGAAATAATTTGGCCAAACCTTCAGTGTGACCAAATGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp GTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGTTAATTTCCAAGTGTTaGTGCAATGGGCCAGAACTT +
Preference number: 5 (lower is better)
Translates to: VIKVTKGLPQNGLMLISQLISKC*CNGPEL
Trigger: AAGTTCTGGCCCATTGCACAAACACTTGGAAATTAA...CTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp CATGGAGTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATAAAACTTAAGTTTCTATaGCAAACTTCAACCAGTGGG +
Preference number: 5 (lower is better)
Translates to: HGVIKVTKGLPQNGLMLIKLKFL*QTSTSG
Trigger: CCCACTGGTTGAAGTTTGCAATAGAAACTTAAGTTT...TATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTACTCCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp GTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGACAGGATCCAACCACTaGTATCTAGATAGTTATCTT +
Preference number: 5 (lower is better)
Translates to: VIKVTKGLPQNGLMLISQTGSNH*YLDSYL
Trigger: AAGATAACTATCTAGATACAAGTGGTTGGATCCTGT...CTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp GTAATTAAAGTAACCAAAGGCTTACCCCAAAATGGGCTCATGCTCATATCTCAGCTTAGTAACAACAGATaGGCCTTCAAATTTCAGAGT +
Preference number: 5 (lower is better)
Translates to: VIKVTKGLPQNGLMLISQLSNNR*AFKFQS
Trigger: ACTCTGAAATTTGAAGGCCAATCTGTTGTTACTAAG...CTGAGATATGAGCATGAGCCCATTTTGGGGTAAGCCTTTGGTTACTTTAATTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS-3UTR CAA 90 bp ATTTACTGTCCCATTTCCTTCCGACACCACACTATCTTGAATTTAGGGAAAAGTCAAAGTGAGATGCTTTaGATAAACTCACTCCTTTGT +
Preference number: 5 (lower is better)
Translates to: IYCPISFRHHTILNLGKSQSEML*INSLLC
Trigger: ACAAAGGAGTGAGTTTATCAAAAGCATCTCACTTTG...ACTTTTCCCTAAATTCAAGATAGTGTGGTGTCGGAAGGAAATGGGACAGTAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS GCA 72 bp CGTCCGGCAGCGCACGCAGAACCGACCCGCACTCCCTaGCCGGCCTGCCCGGCCTCTCGCGCCGGAAGTGAC +
Preference number: 6 (lower is better)
Translates to: RPAAHAEPTRTP*PACPASRAGSD
Trigger: GTCACTTCCGGCGCGAGAGGCCGGGCAGGCCGGGCAGGGAGTGCGGGTCGGTTCTGCGTGCGCTGCCGGACG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262605.9
CDS CAA 72 bp CGCAGCAGGAAGGCATCGTCGAGGGATGTGCTCAGGTaGGGGTACTCCTTCCGCACCATGTCACGAAGGGCC +
Preference number: 6 (lower is better)
Translates to: RSRKASSRDVLR*GYSFRTMSRRA
Trigger: GGCCCTTCGTGACATGGTGCGGAAGGAGTACCCCAACCTGAGCACATCCCTCGACGATGCCTTCCTGCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
ENST00000456317.1
CDS CAA 90 bp CGGAGGAAGCGCAGCAGGAAGGCATCGTCGAGGGATGTGCTCAGGTaGGGGTACTCCTTCCGCACCATGTCACGAAGGGCCTGCACATCT +
Preference number: 6 (lower is better)
Translates to: RRKRSRKASSRDVLR*GYSFRTMSRRACTS
Trigger: AGATGTGCAGGCCCTTCGTGACATGGTGCGGAAGGAGTACCCCAACCTGAGCACATCCCTCGACGATGCCTTCCTGCTGCGCTTCCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
ENST00000456317.1
CDS GCA 72 bp GGAGGAAGCGCAGCAGGAAGGCATCGTCGAGGGATGTaGTCAGGTTGGGGTACTCCTTCCGCACCATGTCAC +
Preference number: 6 (lower is better)
Translates to: GGSAAGRHRRGM*SGWGTPSAPCH
Trigger: GTGACATGGTGCGGAAGGAGTACCCCAACCTGAGCACATCCCTCGACGATGCCTTCCTGCTGCGCTTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
ENST00000456317.1
CDS CCA 72 bp GCAGCAGGAAGGCATCGTCGAGGGATGTGCTCAGGTTaGGGTACTCCTTCCGCACCATGTCACGAAGGGCCT +
Preference number: 6 (lower is better)
Translates to: AAGRHRRGMCSG*GTPSAPCHEGP
Trigger: AGGCCCTTCGTGACATGGTGCGGAAGGAGTACCCCAACCTGAGCACATCCCTCGACGATGCCTTCCTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
ENST00000456317.1
CDS GCA 72 bp GAGTCACTTTCTTCGGACATTAGCTACCAAGGTCCCTaGCAACAGAGAAGCCCGGCCCGACTACGGGCGGAG +
Preference number: 6 (lower is better)
Translates to: ESLSSDISYQGP*QQRSPARLRAE
Trigger: CTCCGCCCGTAGTCGGGCCGGGCTTCTCTGTTGGCAGGGACCTTGGTAGCTAATGTCCGAAGAAAGTGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372906.2
CDS CCA 72 bp CGGACATTAGCTACCAAGGTCCCAATGGTTATCTCTTaGAACAGAACGGCCCGACTACGGGCGGAGCGCGGG +
Preference number: 6 (lower is better)
Translates to: RTLATKVPMVIS*NRTARLRAERG
Trigger: CCCGCGCTCCGCCCGTAGTCGGGCCGTTCTGTTCCAAGAGATAACCATTGGGACCTTGGTAGCTAATGTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372904.7
CDS CAA 72 bp TCGGACATTAGCTACCAAGGTCCCAATGGTTATCTCTaGGAACAGAACGGCCCGACTACGGGCGGAGCGCGG +
Preference number: 6 (lower is better)
Translates to: SDISYQGPNGYL*EQNGPTTGGAR
Trigger: CCGCGCTCCGCCCGTAGTCGGGCCGTTCTGTTCCAAGAGATAACCATTGGGACCTTGGTAGCTAATGTCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372904.7
CDS GCA 72 bp TTGGGGTACTCCTTCCGCACCATGTCACGAAGGGCCTaGACATCTCGAAGTCTCCATTCCGGCTTTTCCTGC +
Preference number: 6 (lower is better)
Translates to: LGYSFRTMSRRA*TSRSLHSGFSC
Trigger: GCAGGAAAAGCCGGAATGGAGACTTCGAGATGTGCAGGCCCTTCGTGACATGGTGCGGAAGGAGTACCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
ENST00000456317.1
CDS TCA 72 bp AGACTTCGGGCCAGCTTCTTCTACAGCTGTGGTAGTTaGCGAGGAGCTGCAGGGCCCGGTCGTAATCAAACT +
Preference number: 6 (lower is better)
Translates to: RLRASFFYSCGS*RGAAGPGRNQT
Trigger: AGTTTGATTACGACCGGGCCCTGCAGCTCCTCGTCAACTACCACAGCTGTAGAAGAAGCTGGCCCGAAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
ENST00000456317.1
CDS GCA 72 bp AGGCTGGAGAACTGCTTGAACCCTGGAGGTGGAGGTTaGAGTGAGCCAAAATCGTGTCACTGTACTCCAGCC +
Preference number: 6 (lower is better)
Translates to: RLENCLNPGGGG*SEPKSCHCTPA
Trigger: GGCTGGAGTACAGTGACACGATTTTGGCTCACTGCAACCTCCACCTCCAGGGTTCAAGCAGTTCTCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461134.1
CDS CAA 72 bp CCCCATACTCCTTGGGGAGGATGCTTCTTGGAAGGTTaGTGTGGAGAGAGTTCAAGTCAGACCCATGGAGGA +
Preference number: 6 (lower is better)
Translates to: PHTPWGGCFLEG*CGESSSQTHGG
Trigger: TCCTCCATGGGTCTGACTTGAACTCTCTCCACACAAACCTTCCAAGAAGCATCCTCCCCAAGGAGTATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
ENST00000456317.1
ENST00000461134.1
CDS CCA 72 bp ACAGCAGAAAACAGTCTGAGTCTACAGGGACAGATCTaGCAAATACCAGACCTTCCAGATCAGTGTTGCCCA +
Preference number: 6 (lower is better)
Translates to: TAENSLSLQGQI*QIPDLPDQCCP
Trigger: TGGGCAACACTGATCTGGAAGGTCTGGTATTTGCCAGATCTGTCCCTGTAGACTCAGACTGTTTTCTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461134.1
CDS TCA 72 bp TATGAAGAGCTGCTGCTCTTACAGCAGAAAACAGTCTaGGTCTACAGGGACAGATCTGGCAAATACCAGACC +
Preference number: 6 (lower is better)
Translates to: YEELLLLQQKTV*VYRDRSGKYQT
Trigger: GGTCTGGTATTTGCCAGATCTGTCCCTGTAGACTCAGACTGTTTTCTGCTGTAAGAGCAGCAGCTCTTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461134.1
CDS CCA 72 bp TATGGCTCGGATGTTTTCAGTAATTGGATAGTTGCTTaGTATCCATCTGTCTGGGCGGATGCAGACGACATG +
Preference number: 6 (lower is better)
Translates to: YGSDVFSNWIVA*YPSVWADADDM
Trigger: CATGTCGTCTGCATCCGCCCAGACAGATGGATACCAAGCAACTATCCAATTACTGAAAACATCCGAGCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000456317.1
CDS CCA 72 bp GAGGTTCATTCACCACATGGACTGCTTTTATCCGAATaGGGAAACCATCCTGGAGGATGCCAATCACCTTTT +
Preference number: 6 (lower is better)
Translates to: EVHSPHGLLLSE*GNHPGGCQSPF
Trigger: AAAAGGTGATTGGCATCCTCCAGGATGGTTTCCCCATTCGGATAAAAGCAGTCCATGTGGTGAATGAACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS CAA 72 bp GCAAGGACATCTTTTAAGGCTGATGGCTTCAAGTTATaGAAGACTTCGGGCCAGCTTCTTCTACAGCTGTGG +
Preference number: 6 (lower is better)
Translates to: ARTSFKADGFKL*KTSGQLLLQLW
Trigger: CCACAGCTGTAGAAGAAGCTGGCCCGAAGTCTTCAATAACTTGAAGCCATCAGCCTTAAAAGATGTCCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262605.9
ENST00000372904.7
ENST00000372906.2
ENST00000456317.1
CDS GCA 72 bp GCCTTTAAATATTCGAGGTTCATTCACCACATGGACTaGTTTTATCCGAATGGGGAAACCATCCTGTGTGGG +
Preference number: 6 (lower is better)
Translates to: AFKYSRFIHHMD*FYPNGETILCG
Trigger: CCCACACAGGATGGTTTCCCCATTCGGATAAAAGCAGTCCATGTGGTGAATGAACCTCGAATATTTAAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461134.1
CDS GCA 72 bp GCCTTTAAATATTCGAGGTTCATTCACCACATGGACTaGTTTTATCCGAATGGGGAAACCATCCTGGAGGAT +
Preference number: 6 (lower is better)
Translates to: AFKYSRFIHHMD*FYPNGETILED
Trigger: ATCCTCCAGGATGGTTTCCCCATTCGGATAAAAGCAGTCCATGTGGTGAATGAACCTCGAATATTTAAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7
CDS GCA 72 bp GCCTTTAAATATTCGAGGTTCATTCACCACATGGACTaGTTTTATCCGAATGGGGAAACCATCCTGGGTTTC +
Preference number: 6 (lower is better)
Translates to: AFKYSRFIHHMD*FYPNGETILGF
Trigger: GAAACCCAGGATGGTTTCCCCATTCGGATAAAAGCAGTCCATGTGGTGAATGAACCTCGAATATTTAAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456317.1
CDS TCA 72 bp GAATGGGGAAACCATCCTGGGTTTCTTCAGACTGAATaGGTTTTTCTAAGGTCAAGTATATGGCTCGGATGT +
Preference number: 6 (lower is better)
Translates to: EWGNHPGFLQTE*VFLRSSIWLGC
Trigger: ACATCCGAGCCATATACTTGACCTTAGAAAAACTCATTCAGTCTGAAGAAACCCAGGATGGTTTCCCCATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456317.1
CDS TCA 72 bp TTACAATTCCATTCACCTGGGTTTCTTCAGACTGAATaGGTTTTTCTAAGGTCAAGTATATGGCTCGGATGT +
Preference number: 6 (lower is better)
Translates to: LQFHSPGFLQTE*VFLRSSIWLGC
Trigger: ACATCCGAGCCATATACTTGACCTTAGAAAAACTCATTCAGTCTGAAGAAACCCAGGTGAATGGAATTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262605.9
ENST00000372904.7