RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTLL5 (Homo sapiens)

Ensembl gene IDs: ENSG00000119685

Ensembl transcript IDs: ENST00000286650.9, ENST00000298832.14, ENST00000554132.1, ENST00000554148.5, ENST00000554185.1, ENST00000554487.1, ENST00000554510.5, ENST00000554878.1, ENST00000554935.5, ENST00000554972.1, ENST00000555018.3, ENST00000555290.5, ENST00000555422.5, ENST00000556173.5, ENST00000556265.5, ENST00000556685.1, ENST00000556893.5, ENST00000556976.1, ENST00000556977.5, ENST00000557219.1, ENST00000557636.5, ENST00000608522.2

Found 876 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGCTAATCCCTGGCAGCCTTAACAGACACCACTGTCCTGGGTGCTaGCACAGAACAGTCGTTACCACCAACTTCCACTCAGGTCACCCT +
Preference number: 1 (lower is better)
Translates to: LLIPGSLNRHHCPGC*HRTVVTTNFHSGHP
Trigger: AGGGTGACCTGAGTGGAAGTTGGTGGTAACGACTGTTCTGTGTCAGCACCCAGGACAGTGGTGTCTGTTAAGGCTGCCAGGGATTAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
3UTR TCA 90 bp CAGAAGATCTGCTTTCTTGTTGTCCCAGTGAAAGTCTGCATTGGCTaGTTGGCAACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGG +
Preference number: 1 (lower is better)
Translates to: QKICFLVVPVKVCIG*LATIYCHFCSKALG
Trigger: CCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCCAATCAGCCAATGCAGACTTTCACTGGGACAACAAGAAAGCAGATCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298832.14
3UTR CCA 90 bp AACCCAGAAGATCTGCTTTCTTGTTGTCCCAGTGAAAGTCTGCATTaGCTGATTGGCAACCATCTACTGCCACTTCTGCTCGAAGGCTTT +
Preference number: 1 (lower is better)
Translates to: NPEDLLSCCPSESLH*LIGNHLLPLLLEGF
Trigger: AAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCCAATCAGCCAATGCAGACTTTCACTGGGACAACAAGAAAGCAGATCTTCTGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298832.14
3UTR CCA 90 bp TTTCATCATACGGCTGACCTCACCACATGTTCAGGTAACATTAATTaGGATTTGGTGCTACCAGGCTACCCAGTCCTGATGGCTTTCCTC +
Preference number: 1 (lower is better)
Translates to: FHHTADLTTCSGNIN*DLVLPGYPVLMAFL
Trigger: GAGGAAAGCCATCAGGACTGGGTAGCCTGGTAGCACCAAATCCCAATTAATGTTACCTGAACATGTGGTGAGGTCAGCCGTATGATGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
3UTR TCA 90 bp CAGGTTACAACATCTTTGGCCCCACCCTTTCAAATTCATTCAGTCTaGGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTT +
Preference number: 1 (lower is better)
Translates to: QVTTSLAPPFQIHSV*VLPLCLANFNLLRF
Trigger: AAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGAATTTGAAAGGGTGGGGCCAAAGATGTTGTAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556893.5
3UTR GCA 90 bp CAACATCTTTGGCCCCACCCTTTCAAATTCATTCAGTCTGAGTTTTaGCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTC +
Preference number: 1 (lower is better)
Translates to: QHLWPHPFKFIQSEF*PCAWQTSISSGFFL
Trigger: GAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGAATTTGAAAGGGTGGGGCCAAAGATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556893.5
3UTR CCA 90 bp CCCCACCCTTTCAAATTCATTCAGTCTGAGTTTTGCCCTTGTGCCTaGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGG +
Preference number: 1 (lower is better)
Translates to: PHPFKFIQSEFCPCA*QTSISSGFFLHISW
Trigger: CCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGAATTTGAAAGGGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
3UTR GCA 90 bp AAAGTGTTCATTCATGCTCAGGGATATGAACACAACAGTTTGATTTaGAGAGTGCTGTTCCGTACCAGAAAAATTTCTTCTTCTGGCCGG +
Preference number: 1 (lower is better)
Translates to: KVFIHAQGYEHNSLI*RVLFRTRKISSSGR
Trigger: CCGGCCAGAAGAAGAAATTTTTCTGGTACGGAACAGCACTCTGCAAATCAAACTGTTGTGTTCATATCCCTGAGCATGAATGAACACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556977.5
3UTR TCA 90 bp CGTGTGTCTACAAATATTATCGACAATTTCTTTCCTATAAAAACCTaGTTAGAGCTAGTAGTCAGCTCATGTTCAGATGCCTGGTCCAGC +
Preference number: 1 (lower is better)
Translates to: RVSTNIIDNFFPIKT*LELVVSSCSDAWSS
Trigger: GCTGGACCAGGCATCTGAACATGAGCTGACTACTAGCTCTAATCAGGTTTTTATAGGAAAGAAATTGTCGATAATATTTGTAGACACACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286650.9
3UTR TCA 90 bp CTTAGAAAGTGTTCATTCATGCTCAGGGATATGAACACAACAGTTTaGTTTGCAGAGTGCTGTTCCGTACCAGAAAAATTTCTTCTTCTG +
Preference number: 1 (lower is better)
Translates to: LRKCSFMLRDMNTTV*FAECCSVPEKFLLL
Trigger: CAGAAGAAGAAATTTTTCTGGTACGGAACAGCACTCTGCAAATCAAACTGTTGTGTTCATATCCCTGAGCATGAATGAACACTTTCTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556977.5
3UTR-3UTR TCA 90 bp ATTTGCAGAGTGCTGTTCCGTACCAGAAAAATTTCTTCTTCTGGCCGGGCGTGGGCACTCCAGCCTGGGTaGCAGAGCGATACTCATCTC +
Preference number: 2 (lower is better)
Translates to: ICRVLFRTRKISSSGRAWALQPG*QSDTHL
Trigger: GAGATGAGTATCGCTCTGTCACCCAGGCTGGAGTGC...CCACGCCCGGCCAGAAGAAGAAATTTTTCTGGTACGGAACAGCACTCTGCAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556977.5
3UTR-3UTR TCA 90 bp GCAGCAGTAAAGGGACAGAGAAGACCTAAGCAGTTTGGGGGCATGGGGCAAAGGAAAGTCTGCATTGGCTaGTTGGCAACCATCTACTGC +
Preference number: 2 (lower is better)
Translates to: AAVKGQRRPKQFGGMGQRKVCIG*LATIYC
Trigger: GCAGTAGATGGTTGCCAATCAGCCAATGCAGACTTT...CCTTTGCCCCATGCCCCCAAACTGCTTAGGTCTTCTCTGTCCCTTTACTGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
3UTR-3UTR TCA 90 bp AGAACATTCCCAGCATGCCAGAAAAGCCTCCCTCAGACTGCCACACAGACACTATTGAGGTCAGGAGTTTaGGACCAGCCTGGCCTACAT +
Preference number: 2 (lower is better)
Translates to: RTFPACQKSLPQTATQTLLRSGV*DQPGLH
Trigger: ATGTAGGCCAGGCTGGTCTCAAACTCCTGACCTCAA...TAGTGTCTGTGTGGCAGTCTGAGGGAGGCTTTTCTGGCATGCTGGGAATGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556977.5
3UTR-3UTR TCA 90 bp GCCTCCCTCAGACTGCCACACAGACACTATCCCCCAGTCACTCTTGTTTTTAATGCAAACCCATCCTCATaGGGTACTCCCAAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: ASLRLPHRHYPPVTLVFNANPSS*GTPKQL
Trigger: GAGCTGCTTGGGAGTACCTCATGAGGATGGGTTTGC...ATTAAAAACAAGAGTGACTGGGGGATAGTGTCTGTGTGGCAGTCTGAGGGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556977.5
3UTR CAA 90 bp CTGCCACCTAGAGGCGAACGGAACACAGAGCTCCACCAGCGAGGTTaGGTTAGTCTGCTCTCACTGATTTCAAGTCATAGGATACATGTG +
Preference number: 2 (lower is better)
Translates to: LPPRGERNTELHQRG*VSLLSLISSHRIHV
Trigger: CACATGTATCCTATGACTTGAAATCAGTGAGAGCAGACTAACCAAACCTCGCTGGTGGAGCTCTGTGTTCCGTTCGCCTCTAGGTGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286650.9
3UTR-3UTR TCA 90 bp AACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCAGCAAAATGCACCCAGGAGTGGTaGACAGGTTGTTTCTCTGTG +
Preference number: 2 (lower is better)
Translates to: NHLLPLLLEGFGDFEAAKCTQEW*TGCFSV
Trigger: CACAGAGAAACAACCTGTTCACCACTCCTGGGTGCA...TTTTGCTGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
3UTR-3UTR CCA 90 bp AACATTCCCAGCATGCCAGAAAAGCCTCCCTCAGACTGCCACACAGACACTATCATTAGCCGGGCATGGTaGTGCAAGCTTGTATTCCCA +
Preference number: 2 (lower is better)
Translates to: NIPSMPEKPPSDCHTDTIISRAW*CKLVFP
Trigger: TGGGAATACAAGCTTGCACCACCATGCCCGGCTAAT...GATAGTGTCTGTGTGGCAGTCTGAGGGAGGCTTTTCTGGCATGCTGGGAATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556977.5
3UTR-3UTR TCA 90 bp CTCAGACTGCCACACAGACACTATCCCCCAGTCACTCTTGTTTTTAATTCTTTCGGCAGGCAGATCAATTaGGGTCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: LRLPHRHYPPVTLVFNSFGRQIN*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAATTGATCTGCCTGCC...GAAAGAATTAAAAACAAGAGTGACTGGGGGATAGTGTCTGTGTGGCAGTCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556977.5
3UTR-3UTR GCA 90 bp TTCTGTATAGAACATTCCCAGCATGCCAGAAAAGCCTCCCTCAGACTGCCACACCACAACAGTTTGATTTaGAGAGTGCTGTTCCGTACC +
Preference number: 2 (lower is better)
Translates to: FCIEHSQHARKASLRLPHHNSLI*RVLFRT
Trigger: GGTACGGAACAGCACTCTGCAAATCAAACTGTTGTG...GTGTGGCAGTCTGAGGGAGGCTTTTCTGGCATGCTGGGAATGTTCTATACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556977.5
3UTR-3UTR CCA 90 bp GCCTCCCTCAGACTGCCACACAGACACTATCCCCCAGTCACTCTTGTTTTTAATAAAATTAGCCGGGCATaGTGGTGCAAGCTTGTATTC +
Preference number: 2 (lower is better)
Translates to: ASLRLPHRHYPPVTLVFNKISRA*WCKLVF
Trigger: GAATACAAGCTTGCACCACCATGCCCGGCTAATTTT...ATTAAAAACAAGAGTGACTGGGGGATAGTGTCTGTGTGGCAGTCTGAGGGAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000556977.5
3UTR-3UTR TCA 90 bp TTCTGTATAGAACATTCCCAGCATGCCAGAAAAGCCTCCCTCAGACTGCCACACATGAACACAACAGTTTaGTTTGCAGAGTGCTGTTCC +
Preference number: 2 (lower is better)
Translates to: FCIEHSQHARKASLRLPHMNTTV*FAECCS
Trigger: GGAACAGCACTCTGCAAATCAAACTGTTGTGTTCAT...GTGTGGCAGTCTGAGGGAGGCTTTTCTGGCATGCTGGGAATGTTCTATACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556977.5
3UTR-3UTR GCA 90 bp CTGATTAGAGCTAGTAGTCAGCTCATGTTCAGATGCCTGGTCCAGCCCTTTATCGACAGGACTTATAAATaGTGTGACTGCCACCTAGAG +
Preference number: 2 (lower is better)
Translates to: LIRASSQLMFRCLVQPFIDRTYK*CDCHLE
Trigger: CTCTAGGTGGCAGTCACAGCATTTATAAGTCCTGTC...GATAAAGGGCTGGACCAGGCATCTGAACATGAGCTGACTACTAGCTCTAATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286650.9
3UTR-3UTR GCA 90 bp GGGCAAAGGGAAGGTAAAAGATACAAGTGTGCTCTGACGGGGTATATAATGCATTTGGCAACCATCTACTaGCACTTCTGCTCGAAGGCT +
Preference number: 2 (lower is better)
Translates to: GQREGKRYKCALTGYIMHLATIY*HFCSKA
Trigger: AGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCCAA...ATGCATTATATACCCCGTCAGAGCACACTTGTATCTTTTACCTTCCCTTTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
3UTR-3UTR TCA 90 bp AACATTCCCAGCATGCCAGAAAAGCCTCCCTCAGACTGCCACACAGACACTATCTCATGTACCTTTAAATaGAGCAAAGCAGCTACAAAG +
Preference number: 2 (lower is better)
Translates to: NIPSMPEKPPSDCHTDTISCTFK*SKAATK
Trigger: CTTTGTAGCTGCTTTGCTTCATTTAAAGGTACATGA...GATAGTGTCTGTGTGGCAGTCTGAGGGAGGCTTTTCTGGCATGCTGGGAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556977.5
3UTR-3UTR TCA 90 bp GCCTCCCTCAGACTGCCACACAGACACTATCCCCCAGTCACTCTTGTTTTTAATCTTTCTTTGGAACCCTaGAAATTTCTACACCTAAGG +
Preference number: 2 (lower is better)
Translates to: ASLRLPHRHYPPVTLVFNLSLEP*KFLHLR
Trigger: CCTTAGGTGTAGAAATTTTCAGGGTTCCAAAGAAAG...ATTAAAAACAAGAGTGACTGGGGGATAGTGTCTGTGTGGCAGTCTGAGGGAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556977.5
3UTR-3UTR CCA 90 bp GAAACTTGTGATGAATGCTCCTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAAAGTGAAAGTCTGCATTaGCTGATTGGCAACCATCTA +
Preference number: 2 (lower is better)
Translates to: ETCDECSSFPLDPPKREESESLH*LIGNHL
Trigger: TAGATGGTTGCCAATCAGCCAATGCAGACTTTCACT...TTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAGGAGCATTCATCACAAGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
3UTR-3UTR TCA 90 bp TATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCCATCAAAACCCAGAATTCTTGTTGTCCCAGTaGAAGTCTGCATTGGCTGAT +
Preference number: 2 (lower is better)
Translates to: YIMHQLNVPTAKFHQNPEFLLSQ*KSALAD
Trigger: ATCAGCCAATGCAGACTTTCACTGGGACAACAAGAA...TTCTGGGTTTTGATGGAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
3UTR-3UTR TCA 90 bp GCTGCTTACATTATTGCCAGAAGCTACGTGGATTTTATCTTTAGCCACATCTCTTTCCCACTTCCCAAATaGGCATTGTTCAGCGAGGTT +
Preference number: 2 (lower is better)
Translates to: AAYIIARSYVDFIFSHISFPLPK*ALFSEV
Trigger: AACCTCGCTGAACAATGCTCATTTGGGAAGTGGGAA...AGAGATGTGGCTAAAGATAAAATCCACGTAGCTTCTGGCAATAATGTAAGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555018.3
3UTR-3UTR GCA 90 bp AGTTTTGGTAGTCTCCAATGTTCCCAGGGCTCAAACTCAAAATCTCAGTTAAGATATAAATGCTGTGACTaGCACCTAGAGGCGAACGGA +
Preference number: 2 (lower is better)
Translates to: SFGSLQCSQGSNSKSQLRYKCCD*HLEANG
Trigger: TCCGTTCGCCTCTAGGTGGCAGTCACAGCATTTATA...TCTTAACTGAGATTTTGAGTTTGAGCCCTGGGAACATTGGAGACTACCAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286650.9
3UTR-3UTR CCA 90 bp ACTTGTGATGAATGCTCCTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAACAACTTCATACTGTAATCTaGAAAAGAAGAGGAAGCAAA +
Preference number: 2 (lower is better)
Translates to: TCDECSSFPLDPPKREEQLHTVI*KRRGSK
Trigger: TTTGCTTCCTCTTCTTTTCCAGATTACAGTATGAAG...TTGTTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAGGAGCATTCATCACAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298832.14
3UTR-3UTR CCA 90 bp ACTATCCCCCAGTCACTCTTGTTTTTAATTCTTTCATTTCCCACAAACAACAGGACTAATTACCTTTGCTaGCTACATGCCCCAATGTCA +
Preference number: 2 (lower is better)
Translates to: TIPQSLLFLILSFPTNNRTNYLC*LHAPMS
Trigger: TGACATTGGGGCATGTAGCCAGCAAAGGTAATTAGT...CCTGTTGTTTGTGGGAAATGAAAGAATTAAAAACAAGAGTGACTGGGGGATAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000556977.5
3UTR-3UTR CAA 90 bp GTAGTCAGCTCATGTTCAGATGCCTGGTCCAGCCCTTTATCTAATAACTGCGAGCTCCACCAGCGAGGTTaGGTTAGTCTGCTCTCACTG +
Preference number: 3 (lower is better)
Translates to: VVSSCSDAWSSPLSNNCELHQRG*VSLLSL
Trigger: CAGTGAGAGCAGACTAACCAAACCTCGCTGGTGGAG...CTCGCAGTTATTAGATAAAGGGCTGGACCAGGCATCTGAACATGAGCTGACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286650.9
3UTR-3UTR CAA 90 bp GTCCTGGGTGCTGACACAGAACAGTCGTTACCACCAACTTCCACTCAGGTCACCCAGGTTACAACATCTTaGGCCCCACCCTTTCAAATT +
Preference number: 3 (lower is better)
Translates to: VLGADTEQSLPPTSTQVTQVTTS*APPFQI
Trigger: AATTTGAAAGGGTGGGGCCAAAGATGTTGTAACCTG...GGTGACCTGAGTGGAAGTTGGTGGTAACGACTGTTCTGTGTCAGCACCCAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556893.5
3UTR GCA 72 bp AACATTCCCAGCATGCCAGAAAAGCCTCCCTCAGACTaGCACACAGACACTATCCCCCAGTCACTCTTGTTT +
Preference number: 3 (lower is better)
Translates to: NIPSMPEKPPSD*HTDTIPQSLLF
Trigger: AAACAAGAGTGACTGGGGGATAGTGTCTGTGTGGCAGTCTGAGGGAGGCTTTTCTGGCATGCTGGGAATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556977.5
3UTR GCA 72 bp GCCACCACTCAAGTTCTGTATAGAACATTCCCAGCATaGCAGAAAAGCCTCCCTCAGACTGCCACACAGACA +
Preference number: 3 (lower is better)
Translates to: ATTQVLYRTFPA*QKSLPQTATQT
Trigger: TGTCTGTGTGGCAGTCTGAGGGAGGCTTTTCTGGCATGCTGGGAATGTTCTATACAGAACTTGAGTGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556977.5
3UTR-3UTR CAA 90 bp GAAACTTGTGATGAATGCTCCTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAATTCTGCTCGAAGGCTTaGGGGACTTTGAGGCAGCAA +
Preference number: 3 (lower is better)
Translates to: ETCDECSSFPLDPPKREEFCSKA*GTLRQQ
Trigger: TTGCTGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAA...TTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAGGAGCATTCATCACAAGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298832.14
3UTR-3UTR CAA 90 bp AACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCAGCAAAAAATACTATGGACCCCTaGAAGTGCTGGTGGATGCTT +
Preference number: 3 (lower is better)
Translates to: NHLLPLLLEGFGDFEAAKNTMDP*KCWWML
Trigger: AAGCATCCACCAGCACTTCAAGGGGTCCATAGTATT...TTTTGCTGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000298832.14
3UTR GCA 72 bp TGGCCCCACCCTTTCAAATTCATTCAGTCTGAGTTTTaGCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGT +
Preference number: 3 (lower is better)
Translates to: WPHPFKFIQSEF*PCAWQTSISSG
Trigger: ACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGAATTTGAAAGGGTGGGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556893.5
3UTR CCA 72 bp GATCTGCTTTCTTGTTGTCCCAGTGAAAGTCTGCATTaGCTGATTGGCAACCATCTACTGCCACTTCTGCTC +
Preference number: 3 (lower is better)
Translates to: DLLSCCPSESLH*LIGNHLLPLLL
Trigger: GAGCAGAAGTGGCAGTAGATGGTTGCCAATCAGCCAATGCAGACTTTCACTGGGACAACAAGAAAGCAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298832.14
3UTR-3UTR CAA 90 bp TCCCTCAGACTGCCACACAGACACTATCCCCCAGTCACTCTTGTTTTTAATTCTACACAACAGTTTGATTaGCAGAGTGCTGTTCCGTAC +
Preference number: 3 (lower is better)
Translates to: SLRLPHRHYPPVTLVFNSTQQFD*QSAVPY
Trigger: GTACGGAACAGCACTCTGCAAATCAAACTGTTGTGT...AGAATTAAAAACAAGAGTGACTGGGGGATAGTGTCTGTGTGGCAGTCTGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556977.5
3UTR TCA 72 bp ACATCTTTGGCCCCACCCTTTCAAATTCATTCAGTCTaGGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTC +
Preference number: 3 (lower is better)
Translates to: TSLAPPFQIHSV*VLPLCLANFNL
Trigger: GAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGAATTTGAAAGGGTGGGGCCAAAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556893.5
3UTR CCA 72 bp TTCAAATTCATTCAGTCTGAGTTTTGCCCTTGTGCCTaGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCAT +
Preference number: 3 (lower is better)
Translates to: FKFIQSEFCPCA*QTSISSGFFLH
Trigger: ATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGAATTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
3UTR TCA 72 bp TGTTCATTCATGCTCAGGGATATGAACACAACAGTTTaGTTTGCAGAGTGCTGTTCCGTACCAGAAAAATTT +
Preference number: 3 (lower is better)
Translates to: CSFMLRDMNTTV*FAECCSVPEKF
Trigger: AAATTTTTCTGGTACGGAACAGCACTCTGCAAATCAAACTGTTGTGTTCATATCCCTGAGCATGAATGAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556977.5
3UTR GCA 72 bp ATTCATGCTCAGGGATATGAACACAACAGTTTGATTTaGAGAGTGCTGTTCCGTACCAGAAAAATTTCTTCT +
Preference number: 3 (lower is better)
Translates to: IHAQGYEHNSLI*RVLFRTRKISS
Trigger: AGAAGAAATTTTTCTGGTACGGAACAGCACTCTGCAAATCAAACTGTTGTGTTCATATCCCTGAGCATGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556977.5
3UTR TCA 72 bp ACAAATATTATCGACAATTTCTTTCCTATAAAAACCTaGTTAGAGCTAGTAGTCAGCTCATGTTCAGATGCC +
Preference number: 3 (lower is better)
Translates to: TNIIDNFFPIKT*LELVVSSCSDA
Trigger: GGCATCTGAACATGAGCTGACTACTAGCTCTAATCAGGTTTTTATAGGAAAGAAATTGTCGATAATATTTGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR TCA 90 bp ATGGACCCCTTGAAGTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGCTGCCTGCTGTGGGGTaGTACTTGTGCTGGGGGACC +
Preference number: 4 (lower is better)
Translates to: MDPLKCWWMLHPQSCTQELPAVG*YLCWGT
Trigger: GGTCCCCCAGCACAAGTATCACCCCACAGCAGGCAG...CTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCACTTCAAGGGGTCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp AACATTCCCAGCATGCCAGAAAAGCCTCCCTCAGACTGCCACACAGACACTATCGCGTGGACCGCGCTCTaGGCCTACCTCCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: NIPSMPEKPPSDCHTDTIAWTAL*AYLPPP
Trigger: AGGAGGAGGGAGGTAGGCGCAGAGCGCGGTCCACGC...GATAGTGTCTGTGTGGCAGTCTGAGGGAGGCTTTTCTGGCATGCTGGGAATGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR CCA 90 bp CCTAGAGGCGAACGGAACACAGAGCTCCACCAGCGAGGTTTGGTTAGTCTGCTCTTCCGCGTACTCAGCTaGCAGGAGGAAGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: PRGERNTELHQRGLVSLLFRVLS*QEEGLG
Trigger: CCCCAGACCTTCCTCCTGCCAGCTGAGTACGCGGAA...GAGCAGACTAACCAAACCTCGCTGGTGGAGCTCTGTGTTCCGTTCGCCTCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR GCA 90 bp CTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAACAACTTTGGCGGATGATGATGCGTGGACCGCGCTCTaGGCCTACCTCCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LFPPRSSEKGGTTLADDDAWTAL*AYLPPP
Trigger: AGGAGGAGGGAGGTAGGCGCAGAGCGCGGTCCACGC...ATCATCATCCGCCAAAGTTGTTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp TGTGCTCTGACGGGGTATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCTGCCGGGCTCGACTCTaGTCCAGGAGCTGCCGGGAC +
Preference number: 4 (lower is better)
Translates to: CALTGYIMHQLNVPTAKFCRARL*SRSCRD
Trigger: GTCCCGGCAGCTCCTGGACCAGAGTCGAGCCCGGCA...GAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATACCCCGTCAGAGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp GTCCTGGGTGCTGACACAGAACAGTCGTTACCACCAACTTCCACTCAGGTCACCCTGCCAAAGATTGCCTaGTGCCGGGCTCGACTCTGG +
Preference number: 4 (lower is better)
Translates to: VLGADTEQSLPPTSTQVTLPKIA*CRARLW
Trigger: CCAGAGTCGAGCCCGGCACCAGGCAATCTTTGGCAG...GGTGACCTGAGTGGAAGTTGGTGGTAACGACTGTTCTGTGTCAGCACCCAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR TCA 90 bp GTCCTGGGTGCTGACACAGAACAGTCGTTACCACCAACTTCCACTCAGGTCACCAATGGTGTGACTTCCTaGTCGACAGCGTGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: VLGADTEQSLPPTSTQVTNGVTS*STAWQA
Trigger: GGCCTGCCACGCTGTCGATCAGGAAGTCACACCATT...GGTGACCTGAGTGGAAGTTGGTGGTAACGACTGTTCTGTGTCAGCACCCAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR GCA 90 bp GTAGTCAGCTCATGTTCAGATGCCTGGTCCAGCCCTTTATCTAATAACTGCGAGGCGTGGACCGCGCTCTaGGCCTACCTCCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VVSSCSDAWSSPLSNNCEAWTAL*AYLPPP
Trigger: AGGAGGAGGGAGGTAGGCGCAGAGCGCGGTCCACGC...CTCGCAGTTATTAGATAAAGGGCTGGACCAGGCATCTGAACATGAGCTGACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR GCA 90 bp CCACTGTCCTGGGTGCTGACACAGAACAGTCGTTACCACCAACTTCCACTCAGGGCAAATCCCCCTGTCTaGAGGCTCCTGCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PLSWVLTQNSRYHQLPLRANPPV*RLLLPG
Trigger: TCCTGGAAGCAGGAGCCTGCAGACAGGGGGATTTGC...CCTGAGTGGAAGTTGGTGGTAACGACTGTTCTGTGTCAGCACCCAGGACAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CCA 90 bp ATGCCTGGTCCAGCCCTTTATCTAATAACTGCGAGATGTTTCAGTTCTTCCCTTCGGGGCGAGCAGGCGTaGACCGCGCTCTGCGCCTAC +
Preference number: 4 (lower is better)
Translates to: MPGPALYLITARCFSSSLRGEQA*TALCAY
Trigger: GTAGGCGCAGAGCGCGGTCCACGCCTGCTCGCCCCG...AAGGGAAGAACTGAAACATCTCGCAGTTATTAGATAAAGGGCTGGACCAGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR CCA 90 bp CTCAGACTGCCACACAGACACTATCCCCCAGTCACTCTTGTTTTTAATTCTTTCCGGGGCGAGCAGGCGTaGACCGCGCTCTGCGCCTAC +
Preference number: 4 (lower is better)
Translates to: LRLPHRHYPPVTLVFNSFRGEQA*TALCAY
Trigger: GTAGGCGCAGAGCGCGGTCCACGCCTGCTCGCCCCG...GAAAGAATTAAAAACAAGAGTGACTGGGGGATAGTGTCTGTGTGGCAGTCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR CCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCCGGGGCGAGCAGGCGTaGACCGCGCTCTGCGCCTAC +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSRGEQA*TALCAY
Trigger: GTAGGCGCAGAGCGCGGTCCACGCCTGCTCGCCCCG...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CCA 90 bp GGCAACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCAGCACGAGTTGATGCCCGCTaGGCAGGATCTTGGCACACA +
Preference number: 4 (lower is better)
Translates to: GNHLLPLLLEGFGDFEAARVDAR*AGSWHT
Trigger: TGTGTGCCAAGATCCTGCCCAGCGGGCATCAACTCG...TGCTGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp TGCTCTGACGGGGTATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCCACCAGGAGAGCTGGAGTaGTTCTCGGGAGCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: CSDGVYNASAECPHCQVPPGELE*FSGAWG
Trigger: CCCCCAAGCTCCCGAGAATCACTCCAGCTCTCCTGG...TGGAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATACCCCGTCAGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp TGCTCTGACGGGGTATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCCAGCAGCCGCCGACGGCTaGTTCCCCGGTTACTACAAC +
Preference number: 4 (lower is better)
Translates to: CSDGVYNASAECPHCQVPAAADG*FPGYYN
Trigger: GTTGTAGTAACCGGGGAAGCAGCCGTCGGCGGCTGC...TGGAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATACCCCGTCAGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp TGGCCTACATGGCGAAACCTCGTCTCTCCCAAAGATACAAAAATTAGCCGGGCAGCAGCCGCCGACGGCTaGTTCCCCGGTTACTACAAC +
Preference number: 4 (lower is better)
Translates to: WPTWRNLVSPKDTKISRAAAADG*FPGYYN
Trigger: GTTGTAGTAACCGGGGAAGCAGCCGTCGGCGGCTGC...TGCCCGGCTAATTTTTGTATCTTTGGGAGAGACGAGGTTTCGCCATGTAGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR GCA 90 bp AGTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTGAACAGGTTGGGCTGTCAGAATGCTaGGTACTAGGCGACTGTCCG +
Preference number: 4 (lower is better)
Translates to: SAGGCFTLNHAPRSGEQVGLSEC*VLGDCP
Trigger: CGGACAGTCGCCTAGTACGCAGCATTCTGACAGCCC...AACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp TATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCCATCAAAACCCAGAACGGGGCGAGCAGGCGTaGACCGCGCTCTGCGCCTAC +
Preference number: 4 (lower is better)
Translates to: YIMHQLNVPTAKFHQNPERGEQA*TALCAY
Trigger: GTAGGCGCAGAGCGCGGTCCACGCCTGCTCGCCCCG...TTCTGGGTTTTGATGGAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp CCACTGTCCTGGGTGCTGACACAGAACAGTCGTTACCACCAACTTCCACTCAGGATGGTGGCAAGGCCCTaGAGAGAGGTCAGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: PLSWVLTQNSRYHQLPLRMVARP*REVRGC
Trigger: ACAACCTCTGACCTCTCTCCAGGGCCTTGCCACCAT...CCTGAGTGGAAGTTGGTGGTAACGACTGTTCTGTGTCAGCACCCAGGACAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CCA 90 bp AATACTATGGACCCCTTGAAGTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGCCAGTAGGGCTTaGGATGTTCTGTGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: NTMDPLKCWWMLHPQSCTQASRA*DVLCPG
Trigger: CCCGGGGCACAGAACATCCCAAGCCCTACTGGCCTG...GGTGCATGATTGAGGGTGAAGCATCCACCAGCACTTCAAGGGGTCCATAGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp TTCATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTGCCGGGCTCGACTCTaGTCCAGGAGCTGCCGGGAC +
Preference number: 4 (lower is better)
Translates to: FIQSEFCPCAWQTSISSGCRARL*SRSCRD
Trigger: GTCCCGGCAGCTCCTGGACCAGAGTCGAGCCCGGCA...ACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp GTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGTGCCGGGCTCGACTCTaGTCCAGGAGCTGCCGGGAC +
Preference number: 4 (lower is better)
Translates to: VPGKLQSPQVSFSIFPGECRARL*SRSCRD
Trigger: GTCCCGGCAGCTCCTGGACCAGAGTCGAGCCCGGCA...CTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp GCAGCAGTAAAGGGACAGAGAAGACCTAAGCAGTTTGGGGGCATGGGGCAAAGGGCACTTGTTCGTGGTTaGGTGGGGGTTTGGGAACCA +
Preference number: 4 (lower is better)
Translates to: AAVKGQRRPKQFGGMGQRALVRG*VGVWEP
Trigger: TGGTTCCCAAACCCCCACCCAACCACGAACAAGTGC...CCTTTGCCCCATGCCCCCAAACTGCTTAGGTCTTCTCTGTCCCTTTACTGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp AACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCAGCAAAACAGCCCAACTGGCACTaGACGTCTGACCGCCACTGT +
Preference number: 4 (lower is better)
Translates to: NHLLPLLLEGFGDFEAAKQPNWH*TSDRHC
Trigger: ACAGTGGCGGTCAGACGTTCAGTGCCAGTTGGGCTG...TTTTGCTGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp ATGGACCCCTTGAAGTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGAAGGGACCAATGGTGTaGCTTCCTGATCGACAGCGT +
Preference number: 4 (lower is better)
Translates to: MDPLKCWWMLHPQSCTQEKGPMV*LPDRQR
Trigger: ACGCTGTCGATCAGGAAGTCACACCATTGGTCCCTT...CTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCACTTCAAGGGGTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp GTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTGAACAGGTTGGGGCCAGGATTCTTCTaGGTTCCAGAAGTGCCAATC +
Preference number: 4 (lower is better)
Translates to: VLVDASPSIMHPGVVNRLGPGFF*VPEVPI
Trigger: GATTGGCACTTCTGGAACGCAGAAGAATCCTGGCCC...CAACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp GTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTGAACAGGTTGTTTCTCCTGTCTGCAGGCTCCTaGTTCCAGGAGAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: VDASPSIMHPGVVNRLFLLSAGS*FQESWS
Trigger: ACTCCAGCTCTCCTGGAAGCAGGAGCCTGCAGACAG...GAGAAACAACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGAAGCATCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp TGTGCTCTGACGGGGTATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCCTGGCTGCCAAAGATTaGCTGGTGCCGGGCTCGACT +
Preference number: 4 (lower is better)
Translates to: CALTGYIMHQLNVPTAKFLAAKD*LVPGST
Trigger: AGTCGAGCCCGGCACCAGGCAATCTTTGGCAGCCAG...GAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATACCCCGTCAGAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp AACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCAGCAAAATGGAGTCCATTCAGCTaGCCTTCCGCGGAGGACCCT +
Preference number: 4 (lower is better)
Translates to: NHLLPLLLEGFGDFEAAKWSPFS*PSAEDP
Trigger: AGGGTCCTCCGCGGAAGGGCAGCTGAATGGACTCCA...TTTTGCTGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp AATACTATGGACCCCTTGAAGTGCTGGTGGATGCTTCACCCTCAATCATGCACCTTCCGCGTACTCAGCTaGCAGGAGGAAGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: NTMDPLKCWWMLHPQSCTFRVLS*QEEGLG
Trigger: CCCCAGACCTTCCTCCTGCCAGCTGAGTACGCGGAA...GGTGCATGATTGAGGGTGAAGCATCCACCAGCACTTCAAGGGGTCCATAGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp GGCAACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCAGCATCATTTCCGCATCACTaGCAGAGAGTGGACGGCAAC +
Preference number: 4 (lower is better)
Translates to: GNHLLPLLLEGFGDFEAASFPHH*QRVDGN
Trigger: GTTGCCGTCCACTCTCTGCCAGTGATGCGGAAATGA...TGCTGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp TGCTCCTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAACAACTTTGGCGGATGAAGTCACCCAGCTGGTaGGCCAGGATTCTTCTGCGT +
Preference number: 4 (lower is better)
Translates to: CSSFPLDPPKREEQLWRMKSPSW*ARILLR
Trigger: ACGCAGAAGAATCCTGGCCCACCAGCTGGGTGACTT...CATCCGCCAAAGTTGTTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAGGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp ATGGACCCCTTGAAGTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGCTTCCAGGAGAGCTaGAGTGATTCTCGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: MDPLKCWWMLHPQSCTQECFQES*SDSREL
Trigger: AAGCTCCCGAGAATCACTCCAGCTCTCCTGGAAGCA...CTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCACTTCAAGGGGTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp ATGGACCCCTTGAAGTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGGATCCTCTTGACTTATaGCCTCCTCATCCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: MDPLKCWWMLHPQSCTQEDPLDL*PPHPLR
Trigger: CCTCAGAGGATGAGGAGGTCATAAGTCAAGAGGATC...CTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCACTTCAAGGGGTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp AAGTCTGCATTGGCTGATTGGCAACCATCTACTGCCACTTCTGCTCGAAGGCTTCCCTTTCTCCCGGGCTaGGCCCACGAGGTTTTTCAT +
Preference number: 4 (lower is better)
Translates to: KSALADWQPSTATSARRLPFLPG*AHEVFH
Trigger: ATGAAAAACCTCGTGGGCTCAGCCCGGGAGAAAGGG...AAGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCCAATCAGCCAATGCAGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp CCACTGTCCTGGGTGCTGACACAGAACAGTCGTTACCACCAACTTCCACTCAGGTTAGGCTCTAGCTCCTaGGTCTCAAGTTTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PLSWVLTQNSRYHQLPLRLGSSS*VSSLQQ
Trigger: CTGCTGCAAACTTGAGACTCAGGAGCTAGAGCCTAA...CCTGAGTGGAAGTTGGTGGTAACGACTGTTCTGTGTCAGCACCCAGGACAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR TCA 90 bp ATGGACCCCTTGAAGTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGAAAATTGTTGGCTGGTaGGGCATGCTGGGGATAGCT +
Preference number: 4 (lower is better)
Translates to: MDPLKCWWMLHPQSCTQEKIVGW*GMLGIA
Trigger: AGCTATCCCCAGCATGCCTCACCAGCCAACAATTTT...CTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCACTTCAAGGGGTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp TCATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTCCAGGAGAGCTGGAGTaGTTCTCGGGAGCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: SFSLSFALVPGKLQSPQVPGELE*FSGAWG
Trigger: CCCCCAAGCTCCCGAGAATCACTCCAGCTCTCCTGG...AACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR TCA 90 bp TGTTCAGGTAACATTAATTGGGATTTGGTGCTACCAGGCTACCCAGTCCTGATGCCAGGAGAGCTGGAGTaGTTCTCGGGAGCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: CSGNINWDLVLPGYPVLMPGELE*FSGAWG
Trigger: CCCCCAAGCTCCCGAGAATCACTCCAGCTCTCCTGG...CATCAGGACTGGGTAGCCTGGTAGCACCAAATCCCAATTAATGTTACCTGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR GCA 90 bp TGGCCTACATGGCGAAACCTCGTCTCTCCCAAAGATACAAAAATTAGCCGGGCAGGGCTGTCAGAATGCTaGGTACTAGGCGACTGTCCG +
Preference number: 4 (lower is better)
Translates to: WPTWRNLVSPKDTKISRAGLSEC*VLGDCP
Trigger: CGGACAGTCGCCTAGTACGCAGCATTCTGACAGCCC...TGCCCGGCTAATTTTTGTATCTTTGGGAGAGACGAGGTTTCGCCATGTAGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR GCA 90 bp CCACTGTCCTGGGTGCTGACACAGAACAGTCGTTACCACCAACTTCCACTCAGGAAGCTGATAGCTGCCTaGTGTGGGGTGATACTTGTG +
Preference number: 4 (lower is better)
Translates to: PLSWVLTQNSRYHQLPLRKLIAA*CGVILV
Trigger: CACAAGTATCACCCCACAGCAGGCAGCTATCAGCTT...CCTGAGTGGAAGTTGGTGGTAACGACTGTTCTGTGTCAGCACCCAGGACAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CCA 90 bp GTCCTGGGTGCTGACACAGAACAGTCGTTACCACCAACTTCCACTCAGGTCACCATAAAGTCACCCAGCTaGTGGGCCAGGATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: VLGADTEQSLPPTSTQVTIKSPS*WARILL
Trigger: CAGAAGAATCCTGGCCCACCAGCTGGGTGACTTTAT...GGTGACCTGAGTGGAAGTTGGTGGTAACGACTGTTCTGTGTCAGCACCCAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CCA 90 bp GTCCTGGGTGCTGACACAGAACAGTCGTTACCACCAACTTCCACTCAGGTCACCGATAAAGAAGAATGGTaGCAAGGCCCTGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: VLGADTEQSLPPTSTQVTDKEEW*QGPGER
Trigger: CCTCTCTCCAGGGCCTTGCCACCATTCTTCTTTATC...GGTGACCTGAGTGGAAGTTGGTGGTAACGACTGTTCTGTGTCAGCACCCAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CCA 90 bp ATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCCAGGCCAGTAGGGCTTaGGATGTTCTGTGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: IQSEFCPCAWQTSISSGFQASRA*DVLCPG
Trigger: CCCGGGGCACAGAACATCCCAAGCCCTACTGGCCTG...GAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp TTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTCAGGCCAGTAGGGCTTaGGATGTTCTGTGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: FSLSFALVPGKLQSPQVSQASRA*DVLCPG
Trigger: CCCGGGGCACAGAACATCCCAAGCCCTACTGGCCTG...AGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp GCAGCAGTAAAGGGACAGAGAAGACCTAAGCAGTTTGGGGGCATGGGGCAAAGGACCACCCCTGTAGCCTaGCTGTACACGTTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: AAVKGQRRPKQFGGMGQRTTPVA*LYTLFS
Trigger: AGAAAACAACGTGTACAGCCAGGCTACAGGGGTGGT...CCTTTGCCCCATGCCCCCAAACTGCTTAGGTCTTCTCTGTCCCTTTACTGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp GCAGCAGTAAAGGGACAGAGAAGACCTAAGCAGTTTGGGGGCATGGGGCAAAGGGAGTTAGGTAGTGTCTaGCTGCCAAAGATTGCCTGG +
Preference number: 4 (lower is better)
Translates to: AAVKGQRRPKQFGGMGQRELGSV*LPKIAW
Trigger: CCAGGCAATCTTTGGCAGCCAGACACTACCTAACTC...CCTTTGCCCCATGCCCCCAAACTGCTTAGGTCTTCTCTGTCCCTTTACTGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp GTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTGAACAGGTTGTTTCTCCCGCGGAGGACCCTTTaGAAGCTTTCTGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: VDASPSIMHPGVVNRLFLPRRTL*KLSGML
Trigger: CAACATCCCAGAAAGCTTCCAAAGGGTCCTCCGCGG...GAGAAACAACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGAAGCATCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp AAGTCTGCATTGGCTGATTGGCAACCATCTACTGCCACTTCTGCTCGAAGGCTTTCTGGTTTGGATTGTTaGTCAGGTAGACGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: KSALADWQPSTATSARRLSGLDC*SGRRPA
Trigger: GGCGGGGCGTCTACCTGATCAACAATCCAAACCAGA...AAGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCCAATCAGCCAATGCAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp AACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCAGCAAAAATAAATTGGCCGAGTTaGTGCCCGCTGGGCAGGATC +
Preference number: 4 (lower is better)
Translates to: NHLLPLLLEGFGDFEAAKINWPS*CPLGRI
Trigger: GATCCTGCCCAGCGGGCATCAACTCGGCCAATTTAT...TTTTGCTGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp TGTGCTCTGACGGGGTATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCCTGGCACTGAACGTCTaGCCGCCACTGTCTTTCATC +
Preference number: 4 (lower is better)
Translates to: CALTGYIMHQLNVPTAKFLALNV*PPLSFI
Trigger: GATGAAAGACAGTGGCGGTCAGACGTTCAGTGCCAG...GAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATACCCCGTCAGAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp TTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTCAGCCCAACTGGCACTaGACGTCTGACCGCCACTGT +
Preference number: 4 (lower is better)
Translates to: FSLSFALVPGKLQSPQVSQPNWH*TSDRHC
Trigger: ACAGTGGCGGTCAGACGTTCAGTGCCAGTTGGGCTG...AGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR TCA 90 bp ATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCCAGCCCAACTGGCACTaGACGTCTGACCGCCACTGT +
Preference number: 4 (lower is better)
Translates to: IQSEFCPCAWQTSISSGFQPNWH*TSDRHC
Trigger: ACAGTGGCGGTCAGACGTTCAGTGCCAGTTGGGCTG...GAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR TCA 90 bp GTCCTGGGTGCTGACACAGAACAGTCGTTACCACCAACTTCCACTCAGGTCACCATGCTGGAGGTTATTTaGTGCTCGCTTGAGGAAACG +
Preference number: 4 (lower is better)
Translates to: VLGADTEQSLPPTSTQVTMLEVI*CSLEET
Trigger: CGTTTCCTCAAGCGAGCATCAAATAACCTCCAGCAT...GGTGACCTGAGTGGAAGTTGGTGGTAACGACTGTTCTGTGTCAGCACCCAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR TCA 90 bp CATACGGCTGACCTCACCACATGTTCAGGTAACATTAATTGGGATTTGGTGCTACTGCCTGCTGTGGGGTaGTACTTGTGCTGGGGGACC +
Preference number: 4 (lower is better)
Translates to: HTADLTTCSGNINWDLVLLPAVG*YLCWGT
Trigger: GGTCCCCCAGCACAAGTATCACCCCACAGCAGGCAG...TAGCACCAAATCCCAATTAATGTTACCTGAACATGTGGTGAGGTCAGCCGTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR TCA 90 bp AAGTCTGCATTGGCTGATTGGCAACCATCTACTGCCACTTCTGCTCGAAGGCTTGGGATGTTGCCCTTCTaGGCACTTGTTCGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: KSALADWQPSTATSARRLGMLPF*ALVRGW
Trigger: CCAACCACGAACAAGTGCTCAGAAGGGCAACATCCC...AAGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCCAATCAGCCAATGCAGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp ATTTGCAGAGTGCTGTTCCGTACCAGAAAAATTTCTTCTTCTGGCCGGGCGTGGGCAAACCCATCCTCATaGGGTACTCCCAAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: ICRVLFRTRKISSSGRAWANPSS*GTPKQL
Trigger: GAGCTGCTTGGGAGTACCTCATGAGGATGGGTTTGC...CCACGCCCGGCCAGAAGAAGAAATTTTTCTGGTACGGAACAGCACTCTGCAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR GCA 90 bp GCAGCAGTAAAGGGACAGAGAAGACCTAAGCAGTTTGGGGGCATGGGGCAAAGGTCATTGCCCTCAATCTaGTACTCCGTCGTCTACGTT +
Preference number: 4 (lower is better)
Translates to: AAVKGQRRPKQFGGMGQRSLPSI*YSVVYV
Trigger: AACGTAGACGACGGAGTAGCAGATTGAGGGCAATGA...CCTTTGCCCCATGCCCCCAAACTGCTTAGGTCTTCTCTGTCCCTTTACTGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp ACTTGTGATGAATGCTCCTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAACAAGCAAATCCCCCTGTCTaGAGGCTCCTGCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TCDECSSFPLDPPKREEQANPPV*RLLLPG
Trigger: TCCTGGAAGCAGGAGCCTGCAGACAGGGGGATTTGC...TTGTTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAGGAGCATTCATCACAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp GTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGCCAAAGATTGCCTGGTaGCGGGCTCGACTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: VPGKLQSPQVSFSIFPGEPKIAW*RARLWS
Trigger: GGACCAGAGTCGAGCCCGGCACCAGGCAATCTTTGG...CTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR GCA 90 bp TTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTCTGGCTGCCAAAGATTaGCTGGTGCCGGGCTCGACT +
Preference number: 4 (lower is better)
Translates to: FSLSFALVPGKLQSPQVSLAAKD*LVPGST
Trigger: AGTCGAGCCCGGCACCAGGCAATCTTTGGCAGCCAG...AGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR GCA 90 bp AGTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTGAACAGGTTTTGGCAACCATCTACTaGCACTTCTGCTCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: SAGGCFTLNHAPRSGEQVLATIY*HFCSKA
Trigger: AGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCCAA...AACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp GCCTCCCTCAGACTGCCACACAGACACTATCCCCCAGTCACTCTTGTTTTTAATAAGCCTCCCTCAGACTaGCACACAGACACTATCCCC +
Preference number: 4 (lower is better)
Translates to: ASLRLPHRHYPPVTLVFNKPPSD*HTDTIP
Trigger: GGGGATAGTGTCTGTGTGGCAGTCTGAGGGAGGCTT...ATTAAAAACAAGAGTGACTGGGGGATAGTGTCTGTGTGGCAGTCTGAGGGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR CCA 90 bp TATGACAGGACTTATAAATGCTGTGACTGCCACCTAGAGGCGAACGGAACACAGTGTCTCATCTTCCCATaGTTCGGGGCGAGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: YDRTYKCCDCHLEANGTQCLIFP*FGASRR
Trigger: ACGCCTGCTCGCCCCGAACCATGGGAAGATGAGACA...CTGTGTTCCGTTCGCCTCTAGGTGGCAGTCACAGCATTTATAAGTCCTGTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR CCA 90 bp TGCTCTGACGGGGTATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCCACCTGCAGACTCCTCCTaGGAAGCCTCCTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: CSDGVYNASAECPHCQVPPADSS*EASCSS
Trigger: TGAAGAACAGGAGGCTTCCCAGGAGGAGTCTGCAGG...TGGAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATACCCCGTCAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp AATACTATGGACCCCTTGAAGTGCTGGTGGATGCTTCACCCTCAATCATGCACCATGGTGGCAAGGCCCTaGAGAGAGGTCAGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: NTMDPLKCWWMLHPQSCTMVARP*REVRGC
Trigger: ACAACCTCTGACCTCTCTCCAGGGCCTTGCCACCAT...GGTGCATGATTGAGGGTGAAGCATCCACCAGCACTTCAAGGGGTCCATAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp TGCTCCTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAACAACTTTGGCGGATGGTTGATGTGGCTGGATaGAGAATACTGTCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: CSSFPLDPPKREEQLWRMVDVAG*RILSRC
Trigger: GCAGCGAGACAGTATTCTCCATCCAGCCACATCAAC...CATCCGCCAAAGTTGTTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAGGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTGCCGGGCTCGACTCTaGTCCAGGAGCTGCCGGGAC +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSCRARL*SRSCRD
Trigger: GTCCCGGCAGCTCCTGGACCAGAGTCGAGCCCGGCA...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp AAGTCTGCATTGGCTGATTGGCAACCATCTACTGCCACTTCTGCTCGAAGGCTTTTGTTCGTGGTTGGGTaGGGGTTTGGGAACCAGGGA +
Preference number: 4 (lower is better)
Translates to: KSALADWQPSTATSARRLLFVVG*GFGNQG
Trigger: TCCCTGGTTCCCAAACCCCCACCCAACCACGAACAA...AAGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCCAATCAGCCAATGCAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp AATACTATGGACCCCTTGAAGTGCTGGTGGATGCTTCACCCTCAATCATGCACCCTGAGCACTTGTTCGTaGTTGGGTGGGGGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: NTMDPLKCWWMLHPQSCTLSTCS*LGGGLG
Trigger: TCCCAAACCCCCACCCAACCACGAACAAGTGCTCAG...GGTGCATGATTGAGGGTGAAGCATCCACCAGCACTTCAAGGGGTCCATAGTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp AGTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTGAACAGGTTCCTTTGGAAGCTTTCTaGGATGTTGCCCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: SAGGCFTLNHAPRSGEQVPLEAF*DVALLS
Trigger: GCTCAGAAGGGCAACATCCCAGAAAGCTTCCAAAGG...AACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp GTCCTGGGTGCTGACACAGAACAGTCGTTACCACCAACTTCCACTCAGGTCACCGTATTGGAAGCTTTCTaGGATGTTGCCCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: VLGADTEQSLPPTSTQVTVLEAF*DVALLS
Trigger: GCTCAGAAGGGCAACATCCCAGAAAGCTTCCAATAC...GGTGACCTGAGTGGAAGTTGGTGGTAACGACTGTTCTGTGTCAGCACCCAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CCA 90 bp ATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCGGGTTTCCCCTGTCCTaGAAGAGGCGTGTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: IQSEFCPCAWQTSISSGFGFPLS*KRRVAS
Trigger: GCTGGCAACACGCCTCTTCCAGGACAGGGGAAACCC...GAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR TCA 90 bp AGAACATTCCCAGCATGCCAGAAAAGCCTCCCTCAGACTGCCACACAGACACTAGATCCTCTTGACTTATaGCCTCCTCATCCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: RTFPACQKSLPQTATQTLDPLDL*PPHPLR
Trigger: CCTCAGAGGATGAGGAGGTCATAAGTCAAGAGGATC...TAGTGTCTGTGTGGCAGTCTGAGGGAGGCTTTTCTGGCATGCTGGGAATGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR TCA 90 bp TTCATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTAATGGTGTGACTTCCTaGTCGACAGCGTGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: FIQSEFCPCAWQTSISSGNGVTS*STAWQA
Trigger: GGCCTGCCACGCTGTCGATCAGGAAGTCACACCATT...ACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR TCA 90 bp AATACTATGGACCCCTTGAAGTGCTGGTGGATGCTTCACCCTCAATCATGCACCCGATCCTGCCTTTGCTaGAGAGGGACGAGACAGTTT +
Preference number: 4 (lower is better)
Translates to: NTMDPLKCWWMLHPQSCTRSCLC*RGTRQF
Trigger: AAACTGTCTCGTCCCTCTTCAGCAAAGGCAGGATCG...GGTGCATGATTGAGGGTGAAGCATCCACCAGCACTTCAAGGGGTCCATAGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCACTGCCTGCTGTGGGGTaGTACTTGTGCTGGGGGACC +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSLPAVG*YLCWGT
Trigger: GGTCCCCCAGCACAAGTATCACCCCACAGCAGGCAG...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR TCA 90 bp AGTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTGAACAGGTTAAAGTCTGCATTGGCTaGTTGGCAACCATCTACTGC +
Preference number: 4 (lower is better)
Translates to: SAGGCFTLNHAPRSGEQVKVCIG*LATIYC
Trigger: GCAGTAGATGGTTGCCAATCAGCCAATGCAGACTTT...AACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp ATTTGCAGAGTGCTGTTCCGTACCAGAAAAATTTCTTCTTCTGGCCGGGCGTGGTTGAGGTCAGGAGTTTaGGACCAGCCTGGCCTACAT +
Preference number: 4 (lower is better)
Translates to: ICRVLFRTRKISSSGRAWLRSGV*DQPGLH
Trigger: ATGTAGGCCAGGCTGGTCTCAAACTCCTGACCTCAA...CCACGCCCGGCCAGAAGAAGAAATTTTTCTGGTACGGAACAGCACTCTGCAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR TCA 90 bp TTCTGTATAGAACATTCCCAGCATGCCAGAAAAGCCTCCCTCAGACTGCCACACGGCAGGCAGATCAATTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: FCIEHSQHARKASLRLPHGRQIN*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAATTGATCTGCCTGCC...GTGTGGCAGTCTGAGGGAGGCTTTTCTGGCATGCTGGGAATGTTCTATACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR TCA 90 bp GACCTCACCACATGTTCAGGTAACATTAATTGGGATTTGGTGCTACCAGGCTACCAGGCTACCCAGTCCTaGTGGCTTTCCTCCCTGCTA +
Preference number: 4 (lower is better)
Translates to: DLTTCSGNINWDLVLPGYQATQS*WLSSLL
Trigger: TAGCAGGGAGGAAAGCCATCAGGACTGGGTAGCCTG...GTAGCCTGGTAGCACCAAATCCCAATTAATGTTACCTGAACATGTGGTGAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR GCA 90 bp GCAGCAGTAAAGGGACAGAGAAGACCTAAGCAGTTTGGGGGCATGGGGCAAAGGATGCGGTTGTATCTCTaGCTTCTTGTTTCAGGTACC +
Preference number: 4 (lower is better)
Translates to: AAVKGQRRPKQFGGMGQRMRLYL*LLVSGT
Trigger: GGTACCTGAAACAAGAAGGCAGAGATACAACCGCAT...CCTTTGCCCCATGCCCCCAAACTGCTTAGGTCTTCTCTGTCCCTTTACTGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp ATTGGCAACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCACTTCCTCTCGTAAAGTaGAGCATGCAGCTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: IGNHLLPLLLEGFGDFEALPLVK*SMQLGL
Trigger: AAGGCCAAGCTGCATGCTGCACTTTACGAGAGGAAG...TGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp TGCTCCTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAACAACTTTGGCGGATGGTATTTTGGCCTCATTaGCCTCAATCTGCTACTCCG +
Preference number: 4 (lower is better)
Translates to: CSSFPLDPPKREEQLWRMVFWPH*PQSATP
Trigger: CGGAGTAGCAGATTGAGGGCAATGAGGCCAAAATAC...CATCCGCCAAAGTTGTTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAGGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp GGCAACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCAGCACCTGAGTCTCAAGTTTaGAGCAGTGTCCACCTTTAT +
Preference number: 4 (lower is better)
Translates to: GNHLLPLLLEGFGDFEAAPESQV*SSVHLY
Trigger: ATAAAGGTGGACACTGCTGCAAACTTGAGACTCAGG...TGCTGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp GGCAACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCAGCAGAGATAGGCAGAGAATaGTATTCGGGCCTGCATTTT +
Preference number: 4 (lower is better)
Translates to: GNHLLPLLLEGFGDFEAAEIGRE*YSGLHF
Trigger: AAAATGCAGGCCCGAATAGCATTCTCTGCCTATCTC...TGCTGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp ACAGTCGTTACCACCAACTTCCACTCAGGTCACCCTGATGAGAATCACCTAAGCGGGCCAGGATTCTTCTaGGTTCCAGAAGTGCCAATC +
Preference number: 4 (lower is better)
Translates to: TVVTTNFHSGHPDENHLSGPGFF*VPEVPI
Trigger: GATTGGCACTTCTGGAACGCAGAAGAATCCTGGCCC...GCTTAGGTGATTCTCATCAGGGTGACCTGAGTGGAAGTTGGTGGTAACGACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR GCA 90 bp GCAGCAGTAAAGGGACAGAGAAGACCTAAGCAGTTTGGGGGCATGGGGCAAAGGCTGGCTATAGATGTGTaGAGCACTTTGGAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: AAVKGQRRPKQFGGMGQRLAIDV*STLEGR
Trigger: TCTTCCTTCCAAAGTGCTGCACACATCTATAGCCAG...CCTTTGCCCCATGCCCCCAAACTGCTTAGGTCTTCTCTGTCCCTTTACTGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp TGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGTCTGGCTGCCAAAGATTaGCTGGTGCCGGGCTCGACT +
Preference number: 4 (lower is better)
Translates to: CLANFNLLRFLSPYFLESLAAKD*LVPGST
Trigger: AGTCGAGCCCGGCACCAGGCAATCTTTGGCAGCCAG...ACTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR GCA 90 bp AGGACTTATAAATGCTGTGACTGCCACCTAGAGGCGAACGGAACACAGAGCTCCCAGCTCATGTTCAGATaGCTGGTCCAGCCCTTTATC +
Preference number: 4 (lower is better)
Translates to: RTYKCCDCHLEANGTQSSQLMFR*LVQPFI
Trigger: GATAAAGGGCTGGACCAGGCATCTGAACATGAGCTG...GGAGCTCTGTGTTCCGTTCGCCTCTAGGTGGCAGTCACAGCATTTATAAGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR GCA 90 bp AGAACATTCCCAGCATGCCAGAAAAGCCTCCCTCAGACTGCCACACAGACACTAAGAACATTCCCAGCATaGCAGAAAAGCCTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: RTFPACQKSLPQTATQTLRTFPA*QKSLPQ
Trigger: CTGAGGGAGGCTTTTCTGGCATGCTGGGAATGTTCT...TAGTGTCTGTGTGGCAGTCTGAGGGAGGCTTTTCTGGCATGCTGGGAATGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR CCA 90 bp GCAGCAGTAAAGGGACAGAGAAGACCTAAGCAGTTTGGGGGCATGGGGCAAAGGATGGAATACCAAAACTaGAATTCTCCTGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: AAVKGQRRPKQFGGMGQRMEYQN*NSPAAS
Trigger: GGAGGCTGCAGGAGAATTCCAGTTTTGGTATTCCAT...CCTTTGCCCCATGCCCCCAAACTGCTTAGGTCTTCTCTGTCCCTTTACTGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp ATTGGCAACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCAAAGAAGGGCTTCAGGTaGGATCCTGTCCACATTAGG +
Preference number: 4 (lower is better)
Translates to: IGNHLLPLLLEGFGDFEAKKGFR*DPVHIR
Trigger: CCTAATGTGGACAGGATCCCACCTGAAGCCCTTCTT...TGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp GTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTGAACAGGTTGCAGGGAGATCTGGTTTaGATTGTTGATCAGGTAGAC +
Preference number: 4 (lower is better)
Translates to: VLVDASPSIMHPGVVNRLQGDLV*IVDQVD
Trigger: GTCTACCTGATCAACAATCCAAACCAGATCTCCCTG...CAACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp GGCAACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCAGCATGGAAGACTCAAAGGTaGGATAAATTGGCCGAGTTG +
Preference number: 4 (lower is better)
Translates to: GNHLLPLLLEGFGDFEAAWKTQR*DKLAEL
Trigger: CAACTCGGCCAATTTATCCCACCTTTGAGTCTTCCA...TGCTGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp AAGTCTGCATTGGCTGATTGGCAACCATCTACTGCCACTTCTGCTCGAAGGCTTATCACTGGCAGAGAGTaGACGGCAACGCTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: KSALADWQPSTATSARRLITGRE*TATLRF
Trigger: AAACCTCAGCGTTGCCGTCCACTCTCTGCCAGTGAT...AAGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCCAATCAGCCAATGCAGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp GAAACTTGTGATGAATGCTCCTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAAGCAGTCATTCTGTCCTaGAAGAGGCGTGTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: ETCDECSSFPLDPPKREEAVILS*KRRVAS
Trigger: GCTGGCAACACGCCTCTTCCAGGACAGAATGACTGC...TTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAGGAGCATTCATCACAAGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp ATGGACCCCTTGAAGTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTTGGGTAATCACTaGGTATTTTGGCCTCATTGC +
Preference number: 4 (lower is better)
Translates to: MDPLKCWWMLHPQSCTQEWLGNH*VFWPHC
Trigger: GCAATGAGGCCAAAATACCCAGTGATTACCCAACCA...CTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCACTTCAAGGGGTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp GTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTGAACAGGTTGTTTCTCGATAAAGAAGAATGGTaGCAAGGCCCTGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: VDASPSIMHPGVVNRLFLDKEEW*QGPGER
Trigger: CCTCTCTCCAGGGCCTTGCCACCATTCTTCTTTATC...GAGAAACAACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGAAGCATCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp AATACTATGGACCCCTTGAAGTGCTGGTGGATGCTTCACCCTCAATCATGCACCGGCAGGGAGAAGCACTaGCAGAGACTGTGTTCAGTA +
Preference number: 4 (lower is better)
Translates to: NTMDPLKCWWMLHPQSCTGREKH*QRLCSV
Trigger: TACTGAACACAGTCTCTGCCAGTGCTTCTCCCTGCC...GGTGCATGATTGAGGGTGAAGCATCCACCAGCACTTCAAGGGGTCCATAGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp GTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTGAACAGGTTGATGTGTGCAGCACTTTaGAAGGAAGAAAAGGGACCA +
Preference number: 4 (lower is better)
Translates to: VLVDASPSIMHPGVVNRLMCAAL*KEEKGP
Trigger: TGGTCCCTTTTCTTCCTTCCAAAGTGCTGCACACAT...CAACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp AGTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTGAACAGGTTGTGAGGAGGTTGATGTaGCTGGATGGAGAATACTGT +
Preference number: 4 (lower is better)
Translates to: SAGGCFTLNHAPRSGEQVVRRLM*LDGEYC
Trigger: ACAGTATTCTCCATCCAGCCACATCAACCTCCTCAC...AACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCCTGCCAAAGATTGCCTaGTGCCGGGCTCGACTCTGG +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSLPKIA*CRARLW
Trigger: CCAGAGTCGAGCCCGGCACCAGGCAATCTTTGGCAG...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp TGTGCTCTGACGGGGTATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCTTGTGGCAGAGTGGTTaGCTTCTGGCCACTAGCTGT +
Preference number: 4 (lower is better)
Translates to: CALTGYIMHQLNVPTAKFLWQSG*LLATSC
Trigger: ACAGCTAGTGGCCAGAAGCCAACCACTCTGCCACAA...GAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATACCCCGTCAGAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp CTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAACAACTTTGGCGGATGATGATGACCCCTTGAAGTGCTaGTGGATGCTTCACCCTCAA +
Preference number: 4 (lower is better)
Translates to: LFPPRSSEKGGTTLADDDDPLKC*WMLHPQ
Trigger: TTGAGGGTGAAGCATCCACCAGCACTTCAAGGGGTC...ATCATCATCCGCCAAAGTTGTTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp TGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGTGGGTTTCCCCTGTCCTaGAAGAGGCGTGTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: CLANFNLLRFLSPYFLESGFPLS*KRRVAS
Trigger: GCTGGCAACACGCCTCTTCCAGGACAGGGGAAACCC...ACTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
3UTR CAA 72 bp AGAGGCGAACGGAACACAGAGCTCCACCAGCGAGGTTaGGTTAGTCTGCTCTCACTGATTTCAAGTCATAGG +
Preference number: 4 (lower is better)
Translates to: RGERNTELHQRG*VSLLSLISSHR
Trigger: CCTATGACTTGAAATCAGTGAGAGCAGACTAACCAAACCTCGCTGGTGGAGCTCTGTGTTCCGTTCGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR TCA 90 bp AGTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTGAACAGGTTGGATGTGAAAAGCCTTaGATCCATGTGTATGCTGCA +
Preference number: 4 (lower is better)
Translates to: SAGGCFTLNHAPRSGEQVGCEKP*IHVYAA
Trigger: TGCAGCATACACATGGATTCAAGGCTTTTCACATCC...AACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp GCAGCAGTAAAGGGACAGAGAAGACCTAAGCAGTTTGGGGGCATGGGGCAAAGGCAGCATATAGTTCATTaGGGTCTTATGCTCGAGGTA +
Preference number: 4 (lower is better)
Translates to: AAVKGQRRPKQFGGMGQRQHIVH*GLMLEV
Trigger: TACCTCGAGCATAAGACCTCAATGAACTATATGCTG...CCTTTGCCCCATGCCCCCAAACTGCTTAGGTCTTCTCTGTCCCTTTACTGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp ATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCCTGGCACTGAACGTCTaGCCGCCACTGTCTTTCATC +
Preference number: 4 (lower is better)
Translates to: IQSEFCPCAWQTSISSGFLALNV*PPLSFI
Trigger: GATGAAAGACAGTGGCGGTCAGACGTTCAGTGCCAG...GAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR TCA 90 bp TGTTCAGGTAACATTAATTGGGATTTGGTGCTACCAGGCTACCCAGTCCTGATGCTGGCACTGAACGTCTaGCCGCCACTGTCTTTCATC +
Preference number: 4 (lower is better)
Translates to: CSGNINWDLVLPGYPVLMLALNV*PPLSFI
Trigger: GATGAAAGACAGTGGCGGTCAGACGTTCAGTGCCAG...CATCAGGACTGGGTAGCCTGGTAGCACCAAATCCCAATTAATGTTACCTGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR TCA 90 bp GGGCAAAGGGAAGGTAAAAGATACAAGTGTGCTCTGACGGGGTATATAATGCATAATGGTGTGACTTCCTaGTCGACAGCGTGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: GQREGKRYKCALTGYIMHNGVTS*STAWQA
Trigger: GGCCTGCCACGCTGTCGATCAGGAAGTCACACCATT...ATGCATTATATACCCCGTCAGAGCACACTTGTATCTTTTACCTTCCCTTTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp ATGGACCCCTTGAAGTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGCACTGCTTCTGTTTATaGTGCCAGTTGCCAAATTCA +
Preference number: 4 (lower is better)
Translates to: MDPLKCWWMLHPQSCTQEHCFCL*CQLPNS
Trigger: TGAATTTGGCAACTGGCATCATAAACAGAAGCAGTG...CTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCACTTCAAGGGGTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGCCAGGAGAGCTGGAGTaGTTCTCGGGAGCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSPGELE*FSGAWG
Trigger: CCCCCAAGCTCCCGAGAATCACTCCAGCTCTCCTGG...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR TCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGCTGCCTGCTGTGGGGTaGTACTTGTGCTGGGGGACC +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSLPAVG*YLCWGT
Trigger: GGTCCCCCAGCACAAGTATCACCCCACAGCAGGCAG...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR TCA 90 bp GCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGGATGTTGCCCTTCTaGGCACTTGTTCGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: ALVPGKLQSPQVSFSIFPGMLPF*ALVRGW
Trigger: CCAACCACGAACAAGTGCTCAGAAGGGCAACATCCC...AGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR TCA 90 bp ACTTGTGATGAATGCTCCTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAACAATGCACCCAGGAGTGGTaGACAGGTTGTTTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: TCDECSSFPLDPPKREEQCTQEW*TGCFSV
Trigger: CACAGAGAAACAACCTGTTCACCACTCCTGGGTGCA...TTGTTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAGGAGCATTCATCACAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp AACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCAGCAAAAATACTATGGACCCCTTaGAGTGCTGGTGGATGCTTC +
Preference number: 4 (lower is better)
Translates to: NHLLPLLLEGFGDFEAAKILWTP*SAGGCF
Trigger: GAAGCATCCACCAGCACTTCAAGGGGTCCATAGTAT...TTTTGCTGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp GACCTCACCACATGTTCAGGTAACATTAATTGGGATTTGGTGCTACCAGGCTACCACTGTCCTGGGTGCTaGCACAGAACAGTCGTTACC +
Preference number: 4 (lower is better)
Translates to: DLTTCSGNINWDLVLPGYHCPGC*HRTVVT
Trigger: GGTAACGACTGTTCTGTGTCAGCACCCAGGACAGTG...GTAGCCTGGTAGCACCAAATCCCAATTAATGTTACCTGAACATGTGGTGAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR GCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCGGGCTGTCAGAATGCTaGGTACTAGGCGACTGTCCG +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSGLSEC*VLGDCP
Trigger: CGGACAGTCGCCTAGTACGCAGCATTCTGACAGCCC...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR GCA 90 bp AACACAGAGCTCCACCAGCGAGGTTTGGTTAGTCTGCTCTCACTGATTTCAAGTCATGGGCTGTCAGAATaGTGCGTACTAGGCGACTGT +
Preference number: 4 (lower is better)
Translates to: NTELHQRGLVSLLSLISSHGLSE*CVLGDC
Trigger: ACAGTCGCCTAGTACGCAGCATTCTGACAGCCCATG...ACTTGAAATCAGTGAGAGCAGACTAACCAAACCTCGCTGGTGGAGCTCTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR GCA 90 bp TTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGCTGTCTGCAGGCTCCTaGTTCCAGGAGAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LCLANFNLLRFLSPYFLELSAGS*FQESWS
Trigger: ACTCCAGCTCTCCTGGAAGCAGGAGCCTGCAGACAG...CTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR GCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCCTGTCTGCAGGCTCCTaGTTCCAGGAGAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSLSAGS*FQESWS
Trigger: ACTCCAGCTCTCCTGGAAGCAGGAGCCTGCAGACAG...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp TGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGTGCAAATCCCCCTGTCTaGAGGCTCCTGCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: CLANFNLLRFLSPYFLESANPPV*RLLLPG
Trigger: TCCTGGAAGCAGGAGCCTGCAGACAGGGGGATTTGC...ACTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR GCA 90 bp TGTGCTCTGACGGGGTATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCAAGCTGATAGCTGCCTaGTGTGGGGTGATACTTGTG +
Preference number: 4 (lower is better)
Translates to: CALTGYIMHQLNVPTAKFKLIAA*CGVILV
Trigger: CACAAGTATCACCCCACAGCAGGCAGCTATCAGCTT...GAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATACCCCGTCAGAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp TATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCCATCAAAACCCAGAACCAAAGATTGCCTGGTaGCGGGCTCGACTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: YIMHQLNVPTAKFHQNPEPKIAW*RARLWS
Trigger: GGACCAGAGTCGAGCCCGGCACCAGGCAATCTTTGG...TTCTGGGTTTTGATGGAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCACCAAAGATTGCCTGGTaGCGGGCTCGACTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSPKIAW*RARLWS
Trigger: GGACCAGAGTCGAGCCCGGCACCAGGCAATCTTTGG...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCACTGGCTGCCAAAGATTaGCTGGTGCCGGGCTCGACT +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSLAAKD*LVPGST
Trigger: AGTCGAGCCCGGCACCAGGCAATCTTTGGCAGCCAG...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp ACTTGTGATGAATGCTCCTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAACAAATGGACCCCTTGAAGTaGTGGTGGATGCTTCACCCT +
Preference number: 4 (lower is better)
Translates to: TCDECSSFPLDPPKREEQMDPLK*WWMLHP
Trigger: AGGGTGAAGCATCCACCAGCACTTCAAGGGGTCCAT...TTGTTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAGGAGCATTCATCACAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp AACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCAGCAAAAATCTACTGCCACTTCTaGTCGAAGGCTTTGGGGACT +
Preference number: 4 (lower is better)
Translates to: NHLLPLLLEGFGDFEAAKIYCHF*SKALGT
Trigger: AGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGAT...TTTTGCTGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp AAGTCTGCATTGGCTGATTGGCAACCATCTACTGCCACTTCTGCTCGAAGGCTTGCTGAATGTCCCCACTaGCAAGTTCCATCAAAACCC +
Preference number: 4 (lower is better)
Translates to: KSALADWQPSTATSARRLAECPH*QVPSKP
Trigger: GGGTTTTGATGGAACTTGGCAGTGGGGACATTCAGC...AAGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCCAATCAGCCAATGCAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp TGCTCCTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAACAACTTTGGCGGATGCTGGATCAAGCAATTTaGATGGCACAGATTCCTGTC +
Preference number: 4 (lower is better)
Translates to: CSSFPLDPPKREEQLWRMLDQAI*MAQIPV
Trigger: GACAGGAATCTGTGCCATCCAAATTGCTTGATCCAG...CATCCGCCAAAGTTGTTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAGGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCATTCCGCGTACTCAGCTaGCAGGAGGAAGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSFRVLS*QEEGLG
Trigger: CCCCAGACCTTCCTCCTGCCAGCTGAGTACGCGGAA...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CCA 90 bp TGCTCCTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAACAACTTTGGCGGATGATCAGGTCTTCTACATaGGCCATCAATGCGGTTGTA +
Preference number: 4 (lower is better)
Translates to: CSSFPLDPPKREEQLWRMIRSST*AINAVV
Trigger: TACAACCGCATTGATGGCCCATGTAGAAGACCTGAT...CATCCGCCAAAGTTGTTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAGGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp TGTGCTCTGACGGGGTATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCCGCTGGGCAGGATCTTaGCACACAAATCCTACAACA +
Preference number: 4 (lower is better)
Translates to: CALTGYIMHQLNVPTAKFRWAGS*HTNPTT
Trigger: TGTTGTAGGATTTGTGTGCCAAGATCCTGCCCAGCG...GAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATACCCCGTCAGAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCCGAGTTGATGCCCGCTaGGCAGGATCTTGGCACACA +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSRVDAR*AGSWHT
Trigger: TGTGTGCCAAGATCCTGCCCAGCGGGCATCAACTCG...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CCA 90 bp CTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAACAACTTTGGCGGATGATGATGGAAAGGGTTTCGCCTaGAAGACTCAAAGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: LFPPRSSEKGGTTLADDDGKGFA*KTQRWD
Trigger: ATCCCACCTTTGAGTCTTCCAGGCGAAACCCTTTCC...ATCATCATCCGCCAAAGTTGTTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp GTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGCCTGCAGACTCCTCCTaGGAAGCCTCCTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: VPGKLQSPQVSFSIFPGEPADSS*EASCSS
Trigger: TGAAGAACAGGAGGCTTCCCAGGAGGAGTCTGCAGG...CTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp ATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCCCTGCAGACTCCTCCTaGGAAGCCTCCTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: IQSEFCPCAWQTSISSGFPADSS*EASCSS
Trigger: TGAAGAACAGGAGGCTTCCCAGGAGGAGTCTGCAGG...GAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp CTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAACAACTTTGGCGGATGATGATGTGCCAATCGTCGACTaGGTAATACCATCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: LFPPRSSEKGGTTLADDDVPIVD*VIPSSV
Trigger: CACTGAGGATGGTATTACCCAGTCGACGATTGGCAC...ATCATCATCCGCCAAAGTTGTTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp ACAGTCGTTACCACCAACTTCCACTCAGGTCACCCTGATGAGAATCACCTAAGCGTGCCAATCGTCGACTaGGTAATACCATCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: TVVTTNFHSGHPDENHLSVPIVD*VIPSSV
Trigger: CACTGAGGATGGTATTACCCAGTCGACGATTGGCAC...GCTTAGGTGATTCTCATCAGGGTGACCTGAGTGGAAGTTGGTGGTAACGACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CCA 90 bp GTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGAAGTCACCCAGCTGGTaGGCCAGGATTCTTCTGCGT +
Preference number: 4 (lower is better)
Translates to: VPGKLQSPQVSFSIFPGEKSPSW*ARILLR
Trigger: ACGCAGAAGAATCCTGGCCCACCAGCTGGGTGACTT...CTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp GACCTCACCACATGTTCAGGTAACATTAATTGGGATTTGGTGCTACCAGGCTACAAGTCACCCAGCTGGTaGGCCAGGATTCTTCTGCGT +
Preference number: 4 (lower is better)
Translates to: DLTTCSGNINWDLVLPGYKSPSW*ARILLR
Trigger: ACGCAGAAGAATCCTGGCCCACCAGCTGGGTGACTT...GTAGCCTGGTAGCACCAAATCCCAATTAATGTTACCTGAACATGTGGTGAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CCA 90 bp AATACTATGGACCCCTTGAAGTGCTGGTGGATGCTTCACCCTCAATCATGCACCATAAAGTCACCCAGCTaGTGGGCCAGGATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: NTMDPLKCWWMLHPQSCTIKSPS*WARILL
Trigger: CAGAAGAATCCTGGCCCACCAGCTGGGTGACTTTAT...GGTGCATGATTGAGGGTGAAGCATCCACCAGCACTTCAAGGGGTCCATAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGCAGGCCAGTAGGGCTTaGGATGTTCTGTGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSQASRA*DVLCPG
Trigger: CCCGGGGCACAGAACATCCCAAGCCCTACTGGCCTG...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp GTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTGAACAGGTTGTTTCTCAGGTTTGTTACCTGTTaGGTGAGGAGGTTGATGTGG +
Preference number: 4 (lower is better)
Translates to: VDASPSIMHPGVVNRLFLRFVTC*VRRLMW
Trigger: CCACATCAACCTCCTCACCCAACAGGTAACAAACCT...GAGAAACAACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGAAGCATCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp TATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCCATCAAAACCCAGAACTGCCAAAGATTGCCTaGTGCCGGGCTCGACTCTGG +
Preference number: 4 (lower is better)
Translates to: YIMHQLNVPTAKFHQNPELPKIA*CRARLW
Trigger: CCAGAGTCGAGCCCGGCACCAGGCAATCTTTGGCAG...TTCTGGGTTTTGATGGAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCACTGCCAAAGATTGCCTaGTGCCGGGCTCGACTCTGG +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSLPKIA*CRARLW
Trigger: CCAGAGTCGAGCCCGGCACCAGGCAATCTTTGGCAG...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp TGTGCTCTGACGGGGTATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCGGAGGCGCAAGAACTTaGAGGTGGTACCACTTTTTG +
Preference number: 4 (lower is better)
Translates to: CALTGYIMHQLNVPTAKFGGART*RWYHFL
Trigger: CAAAAAGTGGTACCACCTCCAAGTTCTTGCGCCTCC...GAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATACCCCGTCAGAGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp GACCTCACCACATGTTCAGGTAACATTAATTGGGATTTGGTGCTACCAGGCTACGCACTTGTTCGTGGTTaGGTGGGGGTTTGGGAACCA +
Preference number: 4 (lower is better)
Translates to: DLTTCSGNINWDLVLPGYALVRG*VGVWEP
Trigger: TGGTTCCCAAACCCCCACCCAACCACGAACAAGTGC...GTAGCCTGGTAGCACCAAATCCCAATTAATGTTACCTGAACATGTGGTGAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CCA 90 bp ATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCCTGAGCACTTGTTCGTaGTTGGGTGGGGGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: IQSEFCPCAWQTSISSGFLSTCS*LGGGLG
Trigger: TCCCAAACCCCCACCCAACCACGAACAAGTGCTCAG...GAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp TGTGCTCTGACGGGGTATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCCCCTTGAAGTGCTGGTaGATGCTTCACCCTCAATCA +
Preference number: 4 (lower is better)
Translates to: CALTGYIMHQLNVPTAKFPLKCW*MLHPQS
Trigger: TGATTGAGGGTGAAGCATCCACCAGCACTTCAAGGG...GAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATACCCCGTCAGAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp GTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTGAACAGGTTGAGTGAAAGTCTGCATTaGCTGATTGGCAACCATCTA +
Preference number: 4 (lower is better)
Translates to: VLVDASPSIMHPGVVNRLSESLH*LIGNHL
Trigger: TAGATGGTTGCCAATCAGCCAATGCAGACTTTCACT...CAACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCATCACTGGCAGAGAGTaGACGGCAACGCTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSITGRE*TATLLG
Trigger: GCCAAGCAGCGTTGCCGTCCACTCTCTGCCAGTGAT...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR TCA 90 bp CTGATTAGAGCTAGTAGTCAGCTCATGTTCAGATGCCTGGTCCAGCCCTTTATCAGCCTCCAGTCCACATaGTGCATGGATGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: LIRASSQLMFRCLVQPFISLQST*CMDDPL
Trigger: AAGAGGATCATCCATGCATCATGTGGACTGGAGGCT...GATAAAGGGCTGGACCAGGCATCTGAACATGAGCTGACTACTAGCTCTAATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR TCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCTGGTTTGGATTGTTaGTCAGGTAGACGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSSGLDC*SGRRPA
Trigger: GGCGGGGCGTCTACCTGATCAACAATCCAAACCAGA...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR TCA 90 bp GCAGCAGTAAAGGGACAGAGAAGACCTAAGCAGTTTGGGGGCATGGGGCAAAGGCTTCATAGAGATAGATaGCAAGAGGATCATAGGAAG +
Preference number: 4 (lower is better)
Translates to: AAVKGQRRPKQFGGMGQRLHRDR*QEDHRK
Trigger: CTTCCTATGATCCTCTTGTCATCTATCTCTATGAAG...CCTTTGCCCCATGCCCCCAAACTGCTTAGGTCTTCTCTGTCCCTTTACTGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCATAAATTGGCCGAGTTaGTGCCCGCTGGGCAGGATC +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSINWPS*CPLGRI
Trigger: GATCCTGCCCAGCGGGCATCAACTCGGCCAATTTAT...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR TCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCACCCTTTCTCCCGGGCTaGGCCCACGAGGTTTTTCAT +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSPFLPG*AHEVFH
Trigger: ATGAAAAACCTCGTGGGCTCAGCCCGGGAGAAAGGG...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR TCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGCAGCCCAACTGGCACTaGACGTCTGACCGCCACTGT +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSQPNWH*TSDRHC
Trigger: ACAGTGGCGGTCAGACGTTCAGTGCCAGTTGGGCTG...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR TCA 90 bp AACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCAGCAAAAATGCTGGAGGTTATTTaGTGCTCGCTTGAGGAAACG +
Preference number: 4 (lower is better)
Translates to: NHLLPLLLEGFGDFEAAKMLEVI*CSLEET
Trigger: CGTTTCCTCAAGCGAGCATCAAATAACCTCCAGCAT...TTTTGCTGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp GCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTAAGGGACCAATGGTGTaGCTTCCTGATCGACAGCGT +
Preference number: 4 (lower is better)
Translates to: ALVPGKLQSPQVSFSIFPKGPMV*LPDRQR
Trigger: ACGCTGTCGATCAGGAAGTCACACCATTGGTCCCTT...AGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR TCA 90 bp GACCTCACCACATGTTCAGGTAACATTAATTGGGATTTGGTGCTACCAGGCTACAAGGGACCAATGGTGTaGCTTCCTGATCGACAGCGT +
Preference number: 4 (lower is better)
Translates to: DLTTCSGNINWDLVLPGYKGPMV*LPDRQR
Trigger: ACGCTGTCGATCAGGAAGTCACACCATTGGTCCCTT...GTAGCCTGGTAGCACCAAATCCCAATTAATGTTACCTGAACATGTGGTGAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR TCA 90 bp GCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTCGATCCTGCCTTTGCTaGAGAGGGACGAGACAGTTT +
Preference number: 4 (lower is better)
Translates to: ALVPGKLQSPQVSFSIFPRSCLC*RGTRQF
Trigger: AAACTGTCTCGTCCCTCTTCAGCAAAGGCAGGATCG...AGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR TCA 90 bp AAGTCTGCATTGGCTGATTGGCAACCATCTACTGCCACTTCTGCTCGAAGGCTTTTCTCAGCTAGCCGCTaGAGTTCAGCTGTAACCATA +
Preference number: 4 (lower is better)
Translates to: KSALADWQPSTATSARRLFSASR*SSAVTI
Trigger: TATGGTTACAGCTGAACTTCAGCGGCTAGCTGAGAA...AAGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCCAATCAGCCAATGCAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp AAGCTGCTTACATTATTGCCAGAAGCTACGTGGATTTTATCTTTAGCCACATCTCCAGGAGAGCTGGAGTaGTTCTCGGGAGCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: KLLTLLPEATWILSLATSPGELE*FSGAWG
Trigger: CCCCCAAGCTCCCGAGAATCACTCCAGCTCTCCTGG...AGATGTGGCTAAAGATAAAATCCACGTAGCTTCTGGCAATAATGTAAGCAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555018.3
CDS-3UTR TCA 90 bp TTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGGGGATGTTGCCCTTCTaGGCACTTGTTCGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: LCLANFNLLRFLSPYFLEGMLPF*ALVRGW
Trigger: CCAACCACGAACAAGTGCTCAGAAGGGCAACATCCC...CTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR GCA 90 bp ATGGACCCCTTGAAGTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGTTAGGTTATAGTCAGTaGTGCTTGGGTGAACTTCAT +
Preference number: 4 (lower is better)
Translates to: MDPLKCWWMLHPQSCTQELGYSQ*CLGELH
Trigger: ATGAAGTTCACCCAAGCAGCACTGACTATAACCTAA...CTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCACTTCAAGGGGTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp ATTGGCAACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCAGTGATTAACTTTTTGTaGTTCAGAGAGGGTGCGCAG +
Preference number: 4 (lower is better)
Translates to: IGNHLLPLLLEGFGDFEAVINFL*FREGAQ
Trigger: CTGCGCACCCTCTCTGAAGCACAAAAAGTTAATCAC...TGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp ACAGTCGTTACCACCAACTTCCACTCAGGTCACCCTGATGAGAATCACCTAAGCTTCTCTAAGAAATCCTaGAGACTCCTCCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: TVVTTNFHSGHPDENHLSFSKKS*RLLLGS
Trigger: GCTTCCCAGGAGGAGTCTGCAGGATTTCTTAGAGAA...GCTTAGGTGATTCTCATCAGGGTGACCTGAGTGGAAGTTGGTGGTAACGACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR GCA 90 bp TGCTCCTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAACAACTTTGGCGGATGAATGCTATTCGGGCCTaGATTTTGCTAAGATTGCCA +
Preference number: 4 (lower is better)
Translates to: CSSFPLDPPKREEQLWRMNAIRA*ILLRLP
Trigger: TGGCAATCTTAGCAAAATGCAGGCCCGAATAGCATT...CATCCGCCAAAGTTGTTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAGGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp AGTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTGAACAGGTTACCATCCTCAGTGAATaGTGGAGGTTATTTGATGCT +
Preference number: 4 (lower is better)
Translates to: SAGGCFTLNHAPRSGEQVTILSE*WRLFDA
Trigger: AGCATCAAATAACCTCCAGCATTCACTGAGGATGGT...AACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp GTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTGAACAGGTTGAGGGTGATCACCTTTTaGCCCACTATCAGAATAATT +
Preference number: 4 (lower is better)
Translates to: VLVDASPSIMHPGVVNRLRVITF*PTIRII
Trigger: AATTATTCTGATAGTGGGGCAAAAGGTGATCACCCT...CAACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCACTGTCTGCAGGCTCCTaGTTCCAGGAGAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSLSAGS*FQESWS
Trigger: ACTCCAGCTCTCCTGGAAGCAGGAGCCTGCAGACAG...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp TGCTCTGACGGGGTATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCCAATTGAAGCTGATAGCTaGCTGCTGTGGGGTGATACT +
Preference number: 4 (lower is better)
Translates to: CSDGVYNASAECPHCQVPIEADS*LLWGDT
Trigger: AGTATCACCCCACAGCAGGCAGCTATCAGCTTCAAT...TGGAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATACCCCGTCAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp AACATTCCCAGCATGCCAGAAAAGCCTCCCTCAGACTGCCACACAGACACTATCCACAACAGTTTGATTTaGAGAGTGCTGTTCCGTACC +
Preference number: 4 (lower is better)
Translates to: NIPSMPEKPPSDCHTDTIHNSLI*RVLFRT
Trigger: GGTACGGAACAGCACTCTGCAAATCAAACTGTTGTG...GATAGTGTCTGTGTGGCAGTCTGAGGGAGGCTTTTCTGGCATGCTGGGAATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR CCA 90 bp GGCAACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCAGCAATCAAGCAATTTGGATaGCACAGATTCCTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: GNHLLPLLLEGFGDFEAAIKQFG*HRFLSH
Trigger: ATGAGACAGGAATCTGTGCCATCCAAATTGCTTGAT...TGCTGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp ATTGGCAACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCAGTCAGATGCATGAACTaGTTCCGAATGTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: IGNHLLPLLLEGFGDFEAVRCMN*FRMFLA
Trigger: AGCCAAGAACATTCGGAACCAGTTCATGCATCTGAC...TGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCGCAGTCATTCTGTCCTaGAAGAGGCGTGTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSAVILS*KRRVAS
Trigger: GCTGGCAACACGCCTCTTCCAGGACAGAATGACTGC...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CCA 90 bp AACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCAGCAAAAGTGCAGCATGCAGCTTaGCCTTTGAATTCAGACTCT +
Preference number: 4 (lower is better)
Translates to: NHLLPLLLEGFGDFEAAKVQHAA*PLNSDS
Trigger: AGAGTCTGAATTCAAAGGCCAAGCTGCATGCTGCAC...TTTTGCTGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp TGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGTATGGTGGCAAGGCCCTaGAGAGAGGTCAGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: CLANFNLLRFLSPYFLESMVARP*REVRGC
Trigger: ACAACCTCTGACCTCTCTCCAGGGCCTTGCCACCAT...ACTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCATGGTGGCAAGGCCCTaGAGAGAGGTCAGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSMVARP*REVRGC
Trigger: ACAACCTCTGACCTCTCTCCAGGGCCTTGCCACCAT...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp TCATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTGCTTCCAGGAGAGCTaGAGTGATTCTCGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: SFSLSFALVPGKLQSPQVCFQES*SDSREL
Trigger: AAGCTCCCGAGAATCACTCCAGCTCTCCTGGAAGCA...AACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp GGGCAAAGGGAAGGTAAAAGATACAAGTGTGCTCTGACGGGGTATATAATGCATGATAGCTGCCTGCTGTaGGGTGATACTTGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GQREGKRYKCALTGYIMHDSCLL*GDTCAG
Trigger: CCCAGCACAAGTATCACCCCACAGCAGGCAGCTATC...ATGCATTATATACCCCGTCAGAGCACACTTGTATCTTTTACCTTCCCTTTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp GGTTACAACATCTTTGGCCCCACCCTTTCAAATTCATTCAGTCTGAGTTTTGCCGATAGCTGCCTGCTGTaGGGTGATACTTGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GYNIFGPTLSNSFSLSFADSCLL*GDTCAG
Trigger: CCCAGCACAAGTATCACCCCACAGCAGGCAGCTATC...GGCAAAACTCAGACTGAATGAATTTGAAAGGGTGGGGCCAAAGATGTTGTAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CCA 90 bp TTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTGTGGCAGAGTGGTTaGCTTCTGGCCACTAGCTGT +
Preference number: 4 (lower is better)
Translates to: FSLSFALVPGKLQSPQVSLWQSG*LLATSC
Trigger: ACAGCTAGTGGCCAGAAGCCAACCACTCTGCCACAA...AGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp TGTGCTCTGACGGGGTATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCTGGTACCACTTTTTGTaGCAGAGTGGTTGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: CALTGYIMHQLNVPTAKFWYHFL*QSGWLL
Trigger: CAGAAGCCAACCACTCTGCCACAAAAAGTGGTACCA...GAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATACCCCGTCAGAGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp AACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCAGCAAAAGCAAGAACTTGGAGGTaGTACCACTTTTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: NHLLPLLLEGFGDFEAAKARTWR*YHFLWQ
Trigger: CTGCCACAAAAAGTGGTACCACCTCCAAGTTCTTGC...TTTTGCTGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp TTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGTTGTTCGTGGTTGGGTaGGGGTTTGGGAACCAGGGA +
Preference number: 4 (lower is better)
Translates to: LCLANFNLLRFLSPYFLELFVVG*GFGNQG
Trigger: TCCCTGGTTCCCAAACCCCCACCCAACCACGAACAA...CTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp TGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGTGCACTTGTTCGTGGTTaGGTGGGGGTTTGGGAACCA +
Preference number: 4 (lower is better)
Translates to: CLANFNLLRFLSPYFLESALVRG*VGVWEP
Trigger: TGGTTCCCAAACCCCCACCCAACCACGAACAAGTGC...ACTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp TGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGTCTGAGCACTTGTTCGTaGTTGGGTGGGGGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: CLANFNLLRFLSPYFLESLSTCS*LGGGLG
Trigger: TCCCAAACCCCCACCCAACCACGAACAAGTGCTCAG...ACTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp AAGTCTGCATTGGCTGATTGGCAACCATCTACTGCCACTTCTGCTCGAAGGCTTTCTGCATTGGCTGATTaGCAACCATCTACTGCCACT +
Preference number: 4 (lower is better)
Translates to: KSALADWQPSTATSARRLSALAD*QPSTAT
Trigger: AGTGGCAGTAGATGGTTGCCAATCAGCCAATGCAGA...AAGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCCAATCAGCCAATGCAGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp TGCTCCTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAACAACTTTGGCGGATGAGGGAGGAACAACTTTaGCGGATGATGATGTTGAAA +
Preference number: 4 (lower is better)
Translates to: CSSFPLDPPKREEQLWRMREEQL*RMMMLK
Trigger: TTTCAACATCATCATCCGCCAAAGTTGTTCCTCCCT...CATCCGCCAAAGTTGTTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAGGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
3UTR CAA 72 bp GACCTCACCACATGTTCAGGTAACATTAATTGGGATTaGGTGCTACCAGGCTACCCAGTCCTGATGGCTTTC +
Preference number: 4 (lower is better)
Translates to: DLTTCSGNINWD*VLPGYPVLMAF
Trigger: GAAAGCCATCAGGACTGGGTAGCCTGGTAGCACCAAATCCCAATTAATGTTACCTGAACATGTGGTGAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR TCA 90 bp GGTCCAGCCCTTTATCTAATAACTGCGAGATGTTTCAGTTCTTCCCTTTCTCAATCTGGTTTGGATTGTTaGTCAGGTAGACGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: GPALYLITARCFSSSLSQSGLDC*SGRRPA
Trigger: GGCGGGGCGTCTACCTGATCAACAATCCAAACCAGA...TTGAGAAAGGGAAGAACTGAAACATCTCGCAGTTATTAGATAAAGGGCTGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR TCA 90 bp TGTGCTCTGACGGGGTATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCATGTTCTTGGCTCCTTaGTCATATCGCACAGTTGCA +
Preference number: 4 (lower is better)
Translates to: CALTGYIMHQLNVPTAKFMFLAP*SYRTVA
Trigger: TGCAACTGTGCGATATGATCAAGGAGCCAAGAACAT...GAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATACCCCGTCAGAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp ATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTAGGCTCTAGCTCCTaGGTCTCAAGTTTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: IQSEFCPCAWQTSISSGFLGSSS*VSSLQQ
Trigger: CTGCTGCAAACTTGAGACTCAGGAGCTAGAGCCTAA...GAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR TCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCACTGGCACTGAACGTCTaGCCGCCACTGTCTTTCATC +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSLALNV*PPLSFI
Trigger: GATGAAAGACAGTGGCGGTCAGACGTTCAGTGCCAG...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR TCA 90 bp AACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCAGCAAAATATTTGATGCTCGCTTaGGGAAACGAACAACCAGCT +
Preference number: 4 (lower is better)
Translates to: NHLLPLLLEGFGDFEAAKYLMLA*GNEQPA
Trigger: AGCTGGTTGTTCGTTTCCTCAAGCGAGCATCAAATA...TTTTGCTGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp GCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTAAAATTGTTGGCTGGTaGGGCATGCTGGGGATAGCT +
Preference number: 4 (lower is better)
Translates to: ALVPGKLQSPQVSFSIFPKIVGW*GMLGIA
Trigger: AGCTATCCCCAGCATGCCTCACCAGCCAACAATTTT...AGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR TCA 90 bp GTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGAAAATTGTTGGCTGGTaGGGCATGCTGGGGATAGCT +
Preference number: 4 (lower is better)
Translates to: VPGKLQSPQVSFSIFPGEKIVGW*GMLGIA
Trigger: AGCTATCCCCAGCATGCCTCACCAGCCAACAATTTT...CTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR TCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGAATGGTGTGACTTCCTaGTCGACAGCGTGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSNGVTS*STAWQA
Trigger: GGCCTGCCACGCTGTCGATCAGGAAGTCACACCATT...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR TCA 90 bp TTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGCGATCCTGCCTTTGCTaGAGAGGGACGAGACAGTTT +
Preference number: 4 (lower is better)
Translates to: LCLANFNLLRFLSPYFLERSCLC*RGTRQF
Trigger: AAACTGTCTCGTCCCTCTTCAGCAAAGGCAGGATCG...CTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR TCA 90 bp GGTCCAGCCCTTTATCTAATAACTGCGAGATGTTTCAGTTCTTCCCTTTCTCAATGCCCAAACTGGTCTTaGACTCCTGGCCTCAGGCAA +
Preference number: 4 (lower is better)
Translates to: GPALYLITARCFSSSLSQCPNWS*TPGLRQ
Trigger: TTGCCTGAGGCCAGGAGTTCAAGACCAGTTTGGGCA...TTGAGAAAGGGAAGAACTGAAACATCTCGCAGTTATTAGATAAAGGGCTGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR TCA 90 bp GTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGCGTCCTCAGTTCAGCTaGCTGCTTGGAAGAAATACC +
Preference number: 4 (lower is better)
Translates to: VPGKLQSPQVSFSIFPGERPQFS*LLGRNT
Trigger: GGTATTTCTTCCAAGCAGTCAGCTGAACTGAGGACG...CTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR GCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCCATGGGCTGTCAGAATaGTGCGTACTAGGCGACTGT +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSHGLSE*CVLGDC
Trigger: ACAGTCGCCTAGTACGCAGCATTCTGACAGCCCATG...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR GCA 90 bp AGGACTTATAAATGCTGTGACTGCCACCTAGAGGCGAACGGAACACAGAGCTCCGGTTATAGTCAGTGCTaGTTGGGTGAACTTCATGAA +
Preference number: 4 (lower is better)
Translates to: RTYKCCDCHLEANGTQSSGYSQC*LGELHE
Trigger: TTCATGAAGTTCACCCAAGCAGCACTGACTATAACC...GGAGCTCTGTGTTCCGTTCGCCTCTAGGTGGCAGTCACAGCATTTATAAGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR GCA 90 bp GTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTGAACAGGTTGTTTCTCAGAGTTCAAAACAACTaGTGCGATGAGGAACAAAGG +
Preference number: 4 (lower is better)
Translates to: VDASPSIMHPGVVNRLFLRVQNN*CDEEQR
Trigger: CCTTTGTTCCTCATCGCAGCAGTTGTTTTGAACTCT...GAGAAACAACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGAAGCATCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp TGTTCAGGTAACATTAATTGGGATTTGGTGCTACCAGGCTACCCAGTCCTGATGCTTCCTCTCGTAAAGTaGAGCATGCAGCTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: CSGNINWDLVLPGYPVLMLPLVK*SMQLGL
Trigger: AAGGCCAAGCTGCATGCTGCACTTTACGAGAGGAAG...CATCAGGACTGGGTAGCCTGGTAGCACCAAATCCCAATTAATGTTACCTGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR GCA 90 bp ACAGTCGTTACCACCAACTTCCACTCAGGTCACCCTGATGAGAATCACCTAAGCCCTGAGTCTCAAGTTTaGAGCAGTGTCCACCTTTAT +
Preference number: 4 (lower is better)
Translates to: TVVTTNFHSGHPDENHLSPESQV*SSVHLY
Trigger: ATAAAGGTGGACACTGCTGCAAACTTGAGACTCAGG...GCTTAGGTGATTCTCATCAGGGTGACCTGAGTGGAAGTTGGTGGTAACGACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR GCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCGGGCCAGGATTCTTCTaGGTTCCAGAAGTGCCAATC +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSGPGFF*VPEVPI
Trigger: GATTGGCACTTCTGGAACGCAGAAGAATCCTGGCCC...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp TGCTCTGACGGGGTATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCCAGTGTTGGGAATTTTCTaGAGAGTAGCAGTAGGACCA +
Preference number: 4 (lower is better)
Translates to: CSDGVYNASAECPHCQVPVLGIF*RVAVGP
Trigger: TGGTCCTACTGCTACTCTGCAGAAAATTCCCAACAC...TGGAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATACCCCGTCAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGGCAAATCCCCCTGTCTaGAGGCTCCTGCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSANPPV*RLLLPG
Trigger: TCCTGGAAGCAGGAGCCTGCAGACAGGGGGATTTGC...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp TTCATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTAAGCTGATAGCTGCCTaGTGTGGGGTGATACTTGTG +
Preference number: 4 (lower is better)
Translates to: FIQSEFCPCAWQTSISSGKLIAA*CGVILV
Trigger: CACAAGTATCACCCCACAGCAGGCAGCTATCAGCTT...ACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR GCA 90 bp GGCAACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCAGCAGGAAATTCTACAACCTaGACCATTATTCATTGTCCA +
Preference number: 4 (lower is better)
Translates to: GNHLLPLLLEGFGDFEAAGNSTT*TIIHCP
Trigger: TGGACAATGAATAATGGTGCAGGTTGTAGAATTTCC...TGCTGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp GTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTGAACAGGTTGTTTCTCAAAACCCAGAAGATCTaGTTTCTTGTTGTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: VDASPSIMHPGVVNRLFLKTQKI*FLVVPV
Trigger: CACTGGGACAACAAGAAAGCAGATCTTCTGGGTTTT...GAGAAACAACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGAAGCATCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp AACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCAGCAAAATCTTCCAGGGAGATCTaGTTTGGATTGTTGATCAGG +
Preference number: 4 (lower is better)
Translates to: NHLLPLLLEGFGDFEAAKSSREI*FGLLIR
Trigger: CCTGATCAACAATCCAAACCAGATCTCCCTGGAAGA...TTTTGCTGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp TGCTCTGACGGGGTATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCCAGGTTCCGAATGTTCTTaGCTCCTTGATCATATCGCA +
Preference number: 4 (lower is better)
Translates to: CSDGVYNASAECPHCQVPGSECS*LLDHIA
Trigger: TGCGATATGATCAAGGAGCCAAGAACATTCGGAACC...TGGAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATACCCCGTCAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp AATACTATGGACCCCTTGAAGTGCTGGTGGATGCTTCACCCTCAATCATGCACCCTCTATCTTCAATTCTaGCGCTCCATCAGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: NTMDPLKCWWMLHPQSCTLYLQF*RSISSH
Trigger: ATGACTGCTGATGGAGCGCCAGAATTGAAGATAGAG...GGTGCATGATTGAGGGTGAAGCATCCACCAGCACTTCAAGGGGTCCATAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp TGCTCCTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAACAACTTTGGCGGATGAACATTCATTTCAGCTaGTTGGGTAATCACTGGGTA +
Preference number: 4 (lower is better)
Translates to: CSSFPLDPPKREEQLWRMNIHFS*LGNHWV
Trigger: TACCCAGTGATTACCCAACCAGCTGAAATGAATGTT...CATCCGCCAAAGTTGTTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAGGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCACCTGCAGACTCCTCCTaGGAAGCCTCCTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSPADSS*EASCSS
Trigger: TGAAGAACAGGAGGCTTCCCAGGAGGAGTCTGCAGG...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp GTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGATAAAGTCACCCAGCTaGTGGGCCAGGATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: VPGKLQSPQVSFSIFPGEIKSPS*WARILL
Trigger: CAGAAGAATCCTGGCCCACCAGCTGGGTGACTTTAT...CTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp GGCAACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCAGCACTGTTGCTGTTTAGGTaGCTTTATTTTCACTTCTTC +
Preference number: 4 (lower is better)
Translates to: GNHLLPLLLEGFGDFEAALLLFR*LYFHFF
Trigger: GAAGAAGTGAAAATAAAGCCACCTAAACAGCAACAG...TGCTGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp GTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGGATAAAGAAGAATGGTaGCAAGGCCCTGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: VPGKLQSPQVSFSIFPGEDKEEW*QGPGER
Trigger: CCTCTCTCCAGGGCCTTGCCACCATTCTTCTTTATC...CTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp TTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGGGCAGGGAGAAGCACTaGCAGAGACTGTGTTCAGTA +
Preference number: 4 (lower is better)
Translates to: LCLANFNLLRFLSPYFLEGREKH*QRLCSV
Trigger: TACTGAACACAGTCTCTGCCAGTGCTTCTCCCTGCC...CTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp TGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGTGGCAGGGAGAAGCACTaGCAGAGACTGTGTTCAGTA +
Preference number: 4 (lower is better)
Translates to: CLANFNLLRFLSPYFLESGREKH*QRLCSV
Trigger: TACTGAACACAGTCTCTGCCAGTGCTTCTCCCTGCC...ACTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp GTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTGAACAGGTTGGCTGTAACCATACTTTaGTTGTACCGTTTGCTATAT +
Preference number: 4 (lower is better)
Translates to: VLVDASPSIMHPGVVNRLAVTIL*LYRLLY
Trigger: ATATAGCAAACGGTACAACCAAAGTATGGTTACAGC...CAACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTGCTTCCAGGAGAGCTaGAGTGATTCTCGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSCFQES*SDSREL
Trigger: AAGCTCCCGAGAATCACTCCAGCTCTCCTGGAAGCA...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp GCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTACCACCCCTGTAGCCTaGCTGTACACGTTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: ALVPGKLQSPQVSFSIFPTTPVA*LYTLFS
Trigger: AGAAAACAACGTGTACAGCCAGGCTACAGGGGTGGT...AGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp GTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGGAGTTAGGTAGTGTCTaGCTGCCAAAGATTGCCTGG +
Preference number: 4 (lower is better)
Translates to: VPGKLQSPQVSFSIFPGEELGSV*LPKIAW
Trigger: CCAGGCAATCTTTGGCAGCCAGACACTACCTAACTC...CTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp TGTTCAGGTAACATTAATTGGGATTTGGTGCTACCAGGCTACCCAGTCCTGATGGGAGGCGCAAGAACTTaGAGGTGGTACCACTTTTTG +
Preference number: 4 (lower is better)
Translates to: CSGNINWDLVLPGYPVLMGGART*RWYHFL
Trigger: CAAAAAGTGGTACCACCTCCAAGTTCTTGCGCCTCC...CATCAGGACTGGGTAGCCTGGTAGCACCAAATCCCAATTAATGTTACCTGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCATTGTTCGTGGTTGGGTaGGGGTTTGGGAACCAGGGA +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSLFVVG*GFGNQG
Trigger: TCCCTGGTTCCCAAACCCCCACCCAACCACGAACAA...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp AGAACATTCCCAGCATGCCAGAAAAGCCTCCCTCAGACTGCCACACAGACACTAACTAATTACCTTTGCTaGCTACATGCCCCAATGTCA +
Preference number: 4 (lower is better)
Translates to: RTFPACQKSLPQTATQTLTNYLC*LHAPMS
Trigger: TGACATTGGGGCATGTAGCCAGCAAAGGTAATTAGT...TAGTGTCTGTGTGGCAGTCTGAGGGAGGCTTTTCTGGCATGCTGGGAATGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR CCA 90 bp CTCAGACTGCCACACAGACACTATCCCCCAGTCACTCTTGTTTTTAATTCTTTCAGTTTGAGACCAGCCTaGCCTACATGGCGAAACCTC +
Preference number: 4 (lower is better)
Translates to: LRLPHRHYPPVTLVFNSFSLRPA*PTWRNL
Trigger: GAGGTTTCGCCATGTAGGCCAGGCTGGTCTCAAACT...GAAAGAATTAAAAACAAGAGTGACTGGGGGATAGTGTCTGTGTGGCAGTCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR CCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCCAGACACCACTGTCCTaGGTGCTGACACAGAACAGT +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSQTPLS*VLTQNS
Trigger: ACTGTTCTGTGTCAGCACCCAGGACAGTGGTGTCTG...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CCA 90 bp ACAGTCGTTACCACCAACTTCCACTCAGGTCACCCTGATGAGAATCACCTAAGCACATTAATTGGGATTTaGTGCTACCAGGCTACCCAG +
Preference number: 4 (lower is better)
Translates to: TVVTTNFHSGHPDENHLSTLIGI*CYQATQ
Trigger: CTGGGTAGCCTGGTAGCACCAAATCCCAATTAATGT...GCTTAGGTGATTCTCATCAGGGTGACCTGAGTGGAAGTTGGTGGTAACGACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR TCA 90 bp AGGACTTATAAATGCTGTGACTGCCACCTAGAGGCGAACGGAACACAGAGCTCCCTTCATAGAGATAGATaGCAAGAGGATCATAGGAAG +
Preference number: 4 (lower is better)
Translates to: RTYKCCDCHLEANGTQSSLHRDR*QEDHRK
Trigger: CTTCCTATGATCCTCTTGTCATCTATCTCTATGAAG...GGAGCTCTGTGTTCCGTTCGCCTCTAGGTGGCAGTCACAGCATTTATAAGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR TCA 90 bp TGCTCTGACGGGGTATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCCAAAACAACTGCTGCGATaGGGAACAAAGGTTTTACAG +
Preference number: 4 (lower is better)
Translates to: CSDGVYNASAECPHCQVPKQLLR*GTKVLQ
Trigger: CTGTAAAACCTTTGTTCCTCATCGCAGCAGTTGTTT...TGGAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATACCCCGTCAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp TCATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTATGCTGGAGGTTATTTaGTGCTCGCTTGAGGAAACG +
Preference number: 4 (lower is better)
Translates to: SFSLSFALVPGKLQSPQVMLEVI*CSLEET
Trigger: CGTTTCCTCAAGCGAGCATCAAATAACCTCCAGCAT...AACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR TCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCAAAATTGTTGGCTGGTaGGGCATGCTGGGGATAGCT +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSKIVGW*GMLGIA
Trigger: AGCTATCCCCAGCATGCCTCACCAGCCAACAATTTT...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR TCA 90 bp TCATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTAGGAGCTGCCGGGACTaGAGTTTTTGTTGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: SFSLSFALVPGKLQSPQVRSCRD*SFCCSS
Trigger: ACTTGAACAACAAAAACTTCAGTCCCGGCAGCTCCT...AACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR TCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGGGGATGTTGCCCTTCTaGGCACTTGTTCGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSGMLPF*ALVRGW
Trigger: CCAACCACGAACAAGTGCTCAGAAGGGCAACATCCC...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR TCA 90 bp GAAACTTGTGATGAATGCTCCTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAATTCTTGTTGTCCCAGTaGAAGTCTGCATTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: ETCDECSSFPLDPPKREEFLLSQ*KSALAD
Trigger: ATCAGCCAATGCAGACTTTCACTGGGACAACAAGAA...TTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAGGAGCATTCATCACAAGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCATCCTGCTGCCTTTGCTaGAGAGGGACGAGACAGTTT +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSSCCLC*RGTRQF
Trigger: AAACTGTCTCGTCCCTCTTCAGCAAAGGCAGCAGGA...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR TCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCCGTCCTCAGTTCAGCTaGCTGCTTGGAAGAAATACC +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSRPQFS*LLGRNT
Trigger: GGTATTTCTTCCAAGCAGTCAGCTGAACTGAGGACG...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR TCA 90 bp ACACTAATTACCTTTGCTGGCTACATGCCCCAATGTCATGTACCTTTAAATGAAGCACTCCAGCCTGGGTaGCAGAGCGATACTCATCTC +
Preference number: 4 (lower is better)
Translates to: TLITFAGYMPQCHVPLNEALQPG*QSDTHL
Trigger: GAGATGAGTATCGCTCTGTCACCCAGGCTGGAGTGC...TTCATTTAAAGGTACATGACATTGGGGCATGTAGCCAGCAAAGGTAATTAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR TCA 90 bp GCCTCCCTCAGACTGCCACACAGACACTATCCCCCAGTCACTCTTGTTTTTAATATGAACACAACAGTTTaGTTTGCAGAGTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: ASLRLPHRHYPPVTLVFNMNTTV*FAECCS
Trigger: GGAACAGCACTCTGCAAATCAAACTGTTGTGTTCAT...ATTAAAAACAAGAGTGACTGGGGGATAGTGTCTGTGTGGCAGTCTGAGGGAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR TCA 90 bp AACATTCCCAGCATGCCAGAAAAGCCTCCCTCAGACTGCCACACAGACACTATCCTTTCTTTGGAACCCTaGAAATTTCTACACCTAAGG +
Preference number: 4 (lower is better)
Translates to: NIPSMPEKPPSDCHTDTILSLEP*KFLHLR
Trigger: CCTTAGGTGTAGAAATTTTCAGGGTTCCAAAGAAAG...GATAGTGTCTGTGTGGCAGTCTGAGGGAGGCTTTTCTGGCATGCTGGGAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR TCA 90 bp TTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGCTTTCATCATACGGCTaGCCTCACCACATGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LCLANFNLLRFLSPYFLELSSYG*PHHMFR
Trigger: CCTGAACATGTGGTGAGGTCAGCCGTATGATGAAAG...CTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR GCA 90 bp TATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCCATCAAAACCCAGAACATGGGCTGTCAGAATaGTGCGTACTAGGCGACTGT +
Preference number: 4 (lower is better)
Translates to: YIMHQLNVPTAKFHQNPEHGLSE*CVLGDC
Trigger: ACAGTCGCCTAGTACGCAGCATTCTGACAGCCCATG...TTCTGGGTTTTGATGGAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp AAGTCTGCATTGGCTGATTGGCAACCATCTACTGCCACTTCTGCTCGAAGGCTTGGTTATAGTCAGTGCTaGTTGGGTGAACTTCATGAA +
Preference number: 4 (lower is better)
Translates to: KSALADWQPSTATSARRLGYSQC*LGELHE
Trigger: TTCATGAAGTTCACCCAAGCAGCACTGACTATAACC...AAGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCCAATCAGCCAATGCAGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp AGAACATTCCCAGCATGCCAGAAAAGCCTCCCTCAGACTGCCACACAGACACTATTAGGTTATAGTCAGTaGTGCTTGGGTGAACTTCAT +
Preference number: 4 (lower is better)
Translates to: RTFPACQKSLPQTATQTLLGYSQ*CLGELH
Trigger: ATGAAGTTCACCCAAGCAGCACTGACTATAACCTAA...TAGTGTCTGTGTGGCAGTCTGAGGGAGGCTTTTCTGGCATGCTGGGAATGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR GCA 90 bp ATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTCATTGCCCTCAATCTaGTACTCCGTCGTCTACGTT +
Preference number: 4 (lower is better)
Translates to: IQSEFCPCAWQTSISSGFSLPSI*YSVVYV
Trigger: AACGTAGACGACGGAGTAGCAGATTGAGGGCAATGA...GAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR GCA 90 bp TCATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTGTATTTTGGCCTCATTaGCCTCAATCTGCTACTCCG +
Preference number: 4 (lower is better)
Translates to: SFSLSFALVPGKLQSPQVVFWPH*PQSATP
Trigger: CGGAGTAGCAGATTGAGGGCAATGAGGCCAAAATAC...AACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR GCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAGGGCCAGGATTCTTCTaGGTTCCAGAAGTGCCAATC +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSGPGFF*VPEVPI
Trigger: GATTGGCACTTCTGGAACGCAGAAGAATCCTGGCCC...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp GCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTCAGTTCAGCCTCACTTaGTTGTCTGATGAACTCCTG +
Preference number: 4 (lower is better)
Translates to: ALVPGKLQSPQVSFSIFPQFSLT*LSDELL
Trigger: CAGGAGTTCATCAGACAAGCAAGTGAGGCTGAACTG...AGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR GCA 90 bp TTCATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTATTGAAGCTGATAGCTaGCTGCTGTGGGGTGATACT +
Preference number: 4 (lower is better)
Translates to: FIQSEFCPCAWQTSISSGIEADS*LLWGDT
Trigger: AGTATCACCCCACAGCAGGCAGCTATCAGCTTCAAT...ACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR GCA 90 bp GTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGATTGAAGCTGATAGCTaGCTGCTGTGGGGTGATACT +
Preference number: 4 (lower is better)
Translates to: VPGKLQSPQVSFSIFPGEIEADS*LLWGDT
Trigger: AGTATCACCCCACAGCAGGCAGCTATCAGCTTCAAT...CTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR GCA 90 bp TATGACAGGACTTATAAATGCTGTGACTGCCACCTAGAGGCGAACGGAACACAGGACAGGACTTATAAATaGTGTGACTGCCACCTAGAG +
Preference number: 4 (lower is better)
Translates to: YDRTYKCCDCHLEANGTQDRTYK*CDCHLE
Trigger: CTCTAGGTGGCAGTCACAGCATTTATAAGTCCTGTC...CTGTGTTCCGTTCGCCTCTAGGTGGCAGTCACAGCATTTATAAGTCCTGTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR GCA 90 bp GCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTTTAATTGGGATTTGGTaGTACCAGGCTACCCAGTCC +
Preference number: 4 (lower is better)
Translates to: ALVPGKLQSPQVSFSIFPLIGIW*YQATQS
Trigger: GGACTGGGTAGCCTGGTAGCACCAAATCCCAATTAA...AGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CCA 90 bp TATGACAGGACTTATAAATGCTGTGACTGCCACCTAGAGGCGAACGGAACACAGATGGAATACCAAAACTaGAATTCTCCTGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: YDRTYKCCDCHLEANGTQMEYQN*NSPAAS
Trigger: GGAGGCTGCAGGAGAATTCCAGTTTTGGTATTCCAT...CTGTGTTCCGTTCGCCTCTAGGTGGCAGTCACAGCATTTATAAGTCCTGTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR CCA 90 bp AACATTCCCAGCATGCCAGAAAAGCCTCCCTCAGACTGCCACACAGACACTATCAGAATAGCGTCGGCATaGAATACCAAAACTGGAATT +
Preference number: 4 (lower is better)
Translates to: NIPSMPEKPPSDCHTDTIRIASA*NTKTGI
Trigger: AATTCCAGTTTTGGTATTCCATGCCGACGCTATTCT...GATAGTGTCTGTGTGGCAGTCTGAGGGAGGCTTTTCTGGCATGCTGGGAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR CCA 90 bp CTCAGACTGCCACACAGACACTATCCCCCAGTCACTCTTGTTTTTAATTCTTTCAAGAAGGGCTTCAGGTaGGATCCTGTCCACATTAGG +
Preference number: 4 (lower is better)
Translates to: LRLPHRHYPPVTLVFNSFKKGFR*DPVHIR
Trigger: CCTAATGTGGACAGGATCCCACCTGAAGCCCTTCTT...GAAAGAATTAAAAACAAGAGTGACTGGGGGATAGTGTCTGTGTGGCAGTCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR CCA 90 bp AACACAGAGCTCCACCAGCGAGGTTTGGTTAGTCTGCTCTCACTGATTTCAAGTTCTTCCAGGGAGATCTaGTTTGGATTGTTGATCAGG +
Preference number: 4 (lower is better)
Translates to: NTELHQRGLVSLLSLISSSSREI*FGLLIR
Trigger: CCTGATCAACAATCCAAACCAGATCTCCCTGGAAGA...ACTTGAAATCAGTGAGAGCAGACTAACCAAACCTCGCTGGTGGAGCTCTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR CCA 90 bp AACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCAGCAAAAATAATCCTCCACTTCTaGATCGTCACAACTGACGTA +
Preference number: 4 (lower is better)
Translates to: NHLLPLLLEGFGDFEAAKIILHF*IVTTDV
Trigger: TACGTCAGTTGTGACGATCCAGAAGTGGAGGATTAT...TTTTGCTGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCCGCTGGGCAGGATCTTaGCACACAAATCCTACAACA +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSRWAGS*HTNPTT
Trigger: TGTTGTAGGATTTGTGTGCCAAGATCCTGCCCAGCG...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCATCATTTCCGCATCACTaGCAGAGAGTGGACGGCAAC +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSSFPHH*QRVDGN
Trigger: GTTGCCGTCCACTCTCTGCCAGTGATGCGGAAATGA...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CCA 90 bp AAGTCTGCATTGGCTGATTGGCAACCATCTACTGCCACTTCTGCTCGAAGGCTTAATCACTGGGTATTTTaGCCTCATTGCCCTCAATCT +
Preference number: 4 (lower is better)
Translates to: KSALADWQPSTATSARRLNHWVF*PHCPQS
Trigger: AGATTGAGGGCAATGAGGCCAAAATACCCAGTGATT...AAGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCCAATCAGCCAATGCAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGAAGTCACCCAGCTGGTaGGCCAGGATTCTTCTGCGT +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSKSPSW*ARILLR
Trigger: ACGCAGAAGAATCCTGGCCCACCAGCTGGGTGACTT...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCATAAAGTCACCCAGCTaGTGGGCCAGGATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSIKSPS*WARILL
Trigger: CAGAAGAATCCTGGCCCACCAGCTGGGTGACTTTAT...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp TGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGTGTTGATGTGGCTGGATaGAGAATACTGTCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: CLANFNLLRFLSPYFLESVDVAG*RILSRC
Trigger: GCAGCGAGACAGTATTCTCCATCCAGCCACATCAAC...ACTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp GCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTAGGTTTGTTACCTGTTaGGTGAGGAGGTTGATGTGG +
Preference number: 4 (lower is better)
Translates to: ALVPGKLQSPQVSFSIFPRFVTC*VRRLMW
Trigger: CCACATCAACCTCCTCACCCAACAGGTAACAAACCT...AGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp GTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGAGGTTTGTTACCTGTTaGGTGAGGAGGTTGATGTGG +
Preference number: 4 (lower is better)
Translates to: VPGKLQSPQVSFSIFPGERFVTC*VRRLMW
Trigger: CCACATCAACCTCCTCACCCAACAGGTAACAAACCT...CTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCATGCTTCCAGGAGAGCTaGAGTGATTCTCGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSCFQES*SDSREL
Trigger: AAGCTCCCGAGAATCACTCCAGCTCTCCTGGAAGCA...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp TTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGACCACCCCTGTAGCCTaGCTGTACACGTTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: LCLANFNLLRFLSPYFLETTPVA*LYTLFS
Trigger: AGAAAACAACGTGTACAGCCAGGCTACAGGGGTGGT...CTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCACCACCCCTGTAGCCTaGCTGTACACGTTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSTTPVA*LYTLFS
Trigger: AGAAAACAACGTGTACAGCCAGGCTACAGGGGTGGT...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGGATAGCTGCCTGCTGTaGGGTGATACTTGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSDSCLL*GDTCAG
Trigger: CCCAGCACAAGTATCACCCCACAGCAGGCAGCTATC...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCATTGTGGCAGAGTGGTTaGCTTCTGGCCACTAGCTGT +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSLWQSG*LLATSC
Trigger: ACAGCTAGTGGCCAGAAGCCAACCACTCTGCCACAA...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp TGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGTGGAGGCGCAAGAACTTaGAGGTGGTACCACTTTTTG +
Preference number: 4 (lower is better)
Translates to: CLANFNLLRFLSPYFLESGGART*RWYHFL
Trigger: CAAAAAGTGGTACCACCTCCAAGTTCTTGCGCCTCC...ACTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTTGTTCGTGGTTGGGTaGGGGTTTGGGAACCAGGGA +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSLFVVG*GFGNQG
Trigger: TCCCTGGTTCCCAAACCCCCACCCAACCACGAACAA...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGGCACTTGTTCGTGGTTaGGTGGGGGTTTGGGAACCA +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSALVRG*VGVWEP
Trigger: TGGTTCCCAAACCCCCACCCAACCACGAACAAGTGC...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGCTGAGCACTTGTTCGTaGTTGGGTGGGGGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSLSTCS*LGGGLG
Trigger: TCCCAAACCCCCACCCAACCACGAACAAGTGCTCAG...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp GTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTGAACAGGTTGCTTCATACTGTAATCTaGAAAAGAAGAGGAAGCAAA +
Preference number: 4 (lower is better)
Translates to: VLVDASPSIMHPGVVNRLLHTVI*KRRGSK
Trigger: TTTGCTTCCTCTTCTTTTCCAGATTACAGTATGAAG...CAACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp TATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCCATCAAAACCCAGAATTAGGCTCTAGCTCCTaGGTCTCAAGTTTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: YIMHQLNVPTAKFHQNPELGSSS*VSSLQQ
Trigger: CTGCTGCAAACTTGAGACTCAGGAGCTAGAGCCTAA...TTCTGGGTTTTGATGGAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp ATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTATTTGATGCTCGCTTaGGGAAACGAACAACCAGCT +
Preference number: 4 (lower is better)
Translates to: IQSEFCPCAWQTSISSGFYLMLA*GNEQPA
Trigger: AGCTGGTTGTTCGTTTCCTCAAGCGAGCATCAAATA...GAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR TCA 90 bp AATACTATGGACCCCTTGAAGTGCTGGTGGATGCTTCACCCTCAATCATGCACCTTAGAAATTTTAGAGTaGGTCCCCAGGAAGACACTA +
Preference number: 4 (lower is better)
Translates to: NTMDPLKCWWMLHPQSCTLEILE*VPRKTL
Trigger: TAGTGTCTTCCTGGGGACTCACTCTAAAATTTCTAA...GGTGCATGATTGAGGGTGAAGCATCCACCAGCACTTCAAGGGGTCCATAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGAAGGGACCAATGGTGTaGCTTCCTGATCGACAGCGT +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSKGPMV*LPDRQR
Trigger: ACGCTGTCGATCAGGAAGTCACACCATTGGTCCCTT...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR TCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCAGGAGCTGCCGGGACTaGAGTTTTTGTTGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSRSCRD*SFCCSS
Trigger: ACTTGAACAACAAAAACTTCAGTCCCGGCAGCTCCT...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR TCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGACGCTGCTTGGCCTTTaGCGACTGAAACTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSTLLGL*RLKLCR
Trigger: TCTGCACAGTTTCAGTCGTCAAAGGCCAAGCAGCGT...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR TCA 90 bp TTCATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTTGAAAGGAGGATCTaGAGCGGGTATTGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: FIQSEFCPCAWQTSISSGFERRI*SGYWKL
Trigger: AAGCTTCCAATACCCGCTTCAGATCCTCCTTTCAAA...ACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR TCA 90 bp ATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCCAAATTCATTCAGTCTaGGTTTTGCCCTTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: IQSEFCPCAWQTSISSGFQIHSV*VLPLCL
Trigger: CAGGCACAAGGGCAAAACTCAGACTGAATGAATTTG...GAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR GCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCACTTCCTCTCGTAAAGTaGAGCATGCAGCTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSLPLVK*SMQLGL
Trigger: AAGGCCAAGCTGCATGCTGCACTTTACGAGAGGAAG...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp TTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGTCATTGCCCTCAATCTaGTACTCCGTCGTCTACGTT +
Preference number: 4 (lower is better)
Translates to: LCLANFNLLRFLSPYFLESLPSI*YSVVYV
Trigger: AACGTAGACGACGGAGTAGCAGATTGAGGGCAATGA...CTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR GCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCATTGCCCTCAATCTaGTACTCCGTCGTCTACGTT +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSSLPSI*YSVVYV
Trigger: AACGTAGACGACGGAGTAGCAGATTGAGGGCAATGA...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp CATACGGCTGACCTCACCACATGTTCAGGTAACATTAATTGGGATTTGGTGCTAGTATTTTGGCCTCATTaGCCTCAATCTGCTACTCCG +
Preference number: 4 (lower is better)
Translates to: HTADLTTCSGNINWDLVLVFWPH*PQSATP
Trigger: CGGAGTAGCAGATTGAGGGCAATGAGGCCAAAATAC...TAGCACCAAATCCCAATTAATGTTACCTGAACATGTGGTGAGGTCAGCCGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR GCA 90 bp ATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCCCTGAGTCTCAAGTTTaGAGCAGTGTCCACCTTTAT +
Preference number: 4 (lower is better)
Translates to: IQSEFCPCAWQTSISSGFPESQV*SSVHLY
Trigger: ATAAAGGTGGACACTGCTGCAAACTTGAGACTCAGG...GAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR GCA 90 bp GTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGGAGATAGGCAGAGAATaGTATTCGGGCCTGCATTTT +
Preference number: 4 (lower is better)
Translates to: VPGKLQSPQVSFSIFPGEEIGRE*YSGLHF
Trigger: AAAATGCAGGCCCGAATAGCATTCTCTGCCTATCTC...CTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR GCA 90 bp TTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTGAGATAGGCAGAGAATaGTATTCGGGCCTGCATTTT +
Preference number: 4 (lower is better)
Translates to: FSLSFALVPGKLQSPQVSEIGRE*YSGLHF
Trigger: AAAATGCAGGCCCGAATAGCATTCTCTGCCTATCTC...AGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR GCA 90 bp GGGCAAAGGGAAGGTAAAAGATACAAGTGTGCTCTGACGGGGTATATAATGCATCAGTTCAGCCTCACTTaGTTGTCTGATGAACTCCTG +
Preference number: 4 (lower is better)
Translates to: GQREGKRYKCALTGYIMHQFSLT*LSDELL
Trigger: CAGGAGTTCATCAGACAAGCAAGTGAGGCTGAACTG...ATGCATTATATACCCCGTCAGAGCACACTTGTATCTTTTACCTTCCCTTTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp TGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGTCAGTTCAGCCTCACTTaGTTGTCTGATGAACTCCTG +
Preference number: 4 (lower is better)
Translates to: CLANFNLLRFLSPYFLESQFSLT*LSDELL
Trigger: CAGGAGTTCATCAGACAAGCAAGTGAGGCTGAACTG...ACTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR GCA 90 bp ATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCGTGTTGGGAATTTTCTaGAGAGTAGCAGTAGGACCA +
Preference number: 4 (lower is better)
Translates to: IQSEFCPCAWQTSISSGFVLGIF*RVAVGP
Trigger: TGGTCCTACTGCTACTCTGCAGAAAATTCCCAACAC...GAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR GCA 90 bp TTCATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTCTGGCTATAGATGTGTaGAGCACTTTGGAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: FIQSEFCPCAWQTSISSGLAIDV*STLEGR
Trigger: TCTTCCTTCCAAAGTGCTGCACACATCTATAGCCAG...ACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR GCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCATTGAAGCTGATAGCTaGCTGCTGTGGGGTGATACT +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSIEADS*LLWGDT
Trigger: AGTATCACCCCACAGCAGGCAGCTATCAGCTTCAAT...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp TGTTCAGGTAACATTAATTGGGATTTGGTGCTACCAGGCTACCCAGTCCTGATGATTCAGTCTGAGTTTTaGCCTTGTGCCTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: CSGNINWDLVLPGYPVLMIQSEF*PCAWQT
Trigger: AGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAAT...CATCAGGACTGGGTAGCCTGGTAGCACCAAATCCCAATTAATGTTACCTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CCA 90 bp TCCCTCAGACTGCCACACAGACACTATCCCCCAGTCACTCTTGTTTTTAATTCTCTGGATCAAGCAATTTaGATGGCACAGATTCCTGTC +
Preference number: 4 (lower is better)
Translates to: SLRLPHRHYPPVTLVFNSLDQAI*MAQIPV
Trigger: GACAGGAATCTGTGCCATCCAAATTGCTTGATCCAG...AGAATTAAAAACAAGAGTGACTGGGGGATAGTGTCTGTGTGGCAGTCTGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR CCA 90 bp CTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAACAACTTTGGCGGATGATGATAGTCCACATGATGCATaGATGATCCTCTTGACTTAT +
Preference number: 4 (lower is better)
Translates to: LFPPRSSEKGGTTLADDDSPHDA*MILLTY
Trigger: ATAAGTCAAGAGGATCATCCATGCATCATGTGGACT...ATCATCATCCGCCAAAGTTGTTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp TTCTGTATAGAACATTCCCAGCATGCCAGAAAAGCCTCCCTCAGACTGCCACACAGTCCACATGATGCATaGATGATCCTCTTGACTTAT +
Preference number: 4 (lower is better)
Translates to: FCIEHSQHARKASLRLPHSPHDA*MILLTY
Trigger: ATAAGTCAAGAGGATCATCCATGCATCATGTGGACT...GTGTGGCAGTCTGAGGGAGGCTTTTCTGGCATGCTGGGAATGTTCTATACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR CCA 90 bp TGCTCTGACGGGGTATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCCAAGAATAGCGTCGGCATaGAATACCAAAACTGGAATT +
Preference number: 4 (lower is better)
Translates to: CSDGVYNASAECPHCQVPRIASA*NTKTGI
Trigger: AATTCCAGTTTTGGTATTCCATGCCGACGCTATTCT...TGGAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATACCCCGTCAGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp GAAACTTGTGATGAATGCTCCTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAAATAGTCAGTGCTGCTTaGGTGAACTTCATGAAATCC +
Preference number: 4 (lower is better)
Translates to: ETCDECSSFPLDPPKREEIVSAA*VNFMKS
Trigger: GGATTTCATGAAGTTCACCCAAGCAGCACTGACTAT...TTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAGGAGCATTCATCACAAGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAAAGAAGGGCTTCAGGTaGGATCCTGTCCACATTAGG +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSKKGFR*DPVHIR
Trigger: CCTAATGTGGACAGGATCCCACCTGAAGCCCTTCTT...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CCA 90 bp TGCTCTGACGGGGTATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCCACACTTCCAACAACCATaGCTTCAGAGTAGAATCTAT +
Preference number: 4 (lower is better)
Translates to: CSDGVYNASAECPHCQVPHFQQP*LQSRIY
Trigger: ATAGATTCTACTCTGAAGCCATGGTTGTTGGAAGTG...TGGAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATACCCCGTCAGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAGGAAAGGGTTTCGCCTaGAAGACTCAAAGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSGKGFA*KTQRWD
Trigger: ATCCCACCTTTGAGTCTTCCAGGCGAAACCCTTTCC...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCGTGCAGCATGCAGCTTaGCCTTTGAATTCAGACTCT +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSVQHAA*PLNSDS
Trigger: AGAGTCTGAATTCAAAGGCCAAGCTGCATGCTGCAC...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAGTGCCAATCGTCGACTaGGTAATACCATCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSVPIVD*VIPSSV
Trigger: CACTGAGGATGGTATTACCCAGTCGACGATTGGCAC...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGGGCAGGGAGAAGCACTaGCAGAGACTGTGTTCAGTA +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSGREKH*QRLCSV
Trigger: TACTGAACACAGTCTCTGCCAGTGCTTCTCCCTGCC...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp TCATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTATGTGTGCAGCACTTTaGAAGGAAGAAAAGGGACCA +
Preference number: 4 (lower is better)
Translates to: SFSLSFALVPGKLQSPQVMCAAL*KEEKGP
Trigger: TGGTCCCTTTTCTTCCTTCCAAAGTGCTGCACACAT...AACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCGTGAGGAGGTTGATGTaGCTGGATGGAGAATACTGT +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSVRRLM*LDGEYC
Trigger: ACAGTATTCTCCATCCAGCCACATCAACCTCCTCAC...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp GGTTACAACATCTTTGGCCCCACCCTTTCAAATTCATTCAGTCTGAGTTTTGCCGTGAGGAGGTTGATGTaGCTGGATGGAGAATACTGT +
Preference number: 4 (lower is better)
Translates to: GYNIFGPTLSNSFSLSFAVRRLM*LDGEYC
Trigger: ACAGTATTCTCCATCCAGCCACATCAACCTCCTCAC...GGCAAAACTCAGACTGAATGAATTTGAAAGGGTGGGGCCAAAGATGTTGTAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAGAGTTAGGTAGTGTCTaGCTGCCAAAGATTGCCTGG +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSELGSV*LPKIAW
Trigger: CCAGGCAATCTTTGGCAGCCAGACACTACCTAACTC...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTGGTACCACTTTTTGTaGCAGAGTGGTTGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSWYHFL*QSGWLL
Trigger: CAGAAGCCAACCACTCTGCCACAAAAAGTGGTACCA...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp GGTTACAACATCTTTGGCCCCACCCTTTCAAATTCATTCAGTCTGAGTTTTGCCTGGTACCACTTTTTGTaGCAGAGTGGTTGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: GYNIFGPTLSNSFSLSFAWYHFL*QSGWLL
Trigger: CAGAAGCCAACCACTCTGCCACAAAAAGTGGTACCA...GGCAAAACTCAGACTGAATGAATTTGAAAGGGTGGGGCCAAAGATGTTGTAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CCA 90 bp TGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGTGCAAGAACTTGGAGGTaGTACCACTTTTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: CLANFNLLRFLSPYFLESARTWR*YHFLWQ
Trigger: CTGCCACAAAAAGTGGTACCACCTCCAAGTTCTTGC...ACTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp CATACGGCTGACCTCACCACATGTTCAGGTAACATTAATTGGGATTTGGTGCTAGCAAGAACTTGGAGGTaGTACCACTTTTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: HTADLTTCSGNINWDLVLARTWR*YHFLWQ
Trigger: CTGCCACAAAAAGTGGTACCACCTCCAAGTTCTTGC...TAGCACCAAATCCCAATTAATGTTACCTGAACATGTGGTGAGGTCAGCCGTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCGCAAGAACTTGGAGGTaGTACCACTTTTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSARTWR*YHFLWQ
Trigger: CTGCCACAAAAAGTGGTACCACCTCCAAGTTCTTGC...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAGGAGGCGCAAGAACTTaGAGGTGGTACCACTTTTTG +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSGGART*RWYHFL
Trigger: CAAAAAGTGGTACCACCTCCAAGTTCTTGCGCCTCC...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp TATGACAGGACTTATAAATGCTGTGACTGCCACCTAGAGGCGAACGGAACACAGTCATGTTCAGATGCCTaGTCCAGCCCTTTATCTAAT +
Preference number: 4 (lower is better)
Translates to: YDRTYKCCDCHLEANGTQSCSDA*SSPLSN
Trigger: ATTAGATAAAGGGCTGGACCAGGCATCTGAACATGA...CTGTGTTCCGTTCGCCTCTAGGTGGCAGTCACAGCATTTATAAGTCCTGTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR CCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGGACGGCAACGCTGCTTaGCCTTTGACGACTGAAACT +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSDGNAA*PLTTET
Trigger: AGTTTCAGTCGTCAAAGGCCAAGCAGCGTTGCCGTC...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCGTATTGGAAGCTTTCTaGGATGTTGCCCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSVLEAF*DVALLS
Trigger: GCTCAGAAGGGCAACATCCCAGAAAGCTTCCAATAC...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp TTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTTTGCCCTTGTGCCTaGCAAACTTCAATCTCCTCA +
Preference number: 4 (lower is better)
Translates to: FSLSFALVPGKLQSPQVSFCPCA*QTSISS
Trigger: TGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAA...AGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR TCA 90 bp AGTTTTGGTAGTCTCCAATGTTCCCAGGGCTCAAACTCAAAATCTCAGTTAAGAGATCCTCTTGACTTATaGCCTCCTCATCCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: SFGSLQCSQGSNSKSQLRDPLDL*PPHPLR
Trigger: CCTCAGAGGATGAGGAGGTCATAAGTCAAGAGGATC...TCTTAACTGAGATTTTGAGTTTGAGCCCTGGGAACATTGGAGACTACCAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR TCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGGATCCTCTTGACTTATaGCCTCCTCATCCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSDPLDL*PPHPLR
Trigger: CCTCAGAGGATGAGGAGGTCATAAGTCAAGAGGATC...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR TCA 90 bp CCTGGTCCAGCCCTTTATCTAATAACTGCGAGATGTTTCAGTTCTTCCCTTTCTGGATGTGAAAAGCCTTaGATCCATGTGTATGCTGCA +
Preference number: 4 (lower is better)
Translates to: PGPALYLITARCFSSSLSGCEKP*IHVYAA
Trigger: TGCAGCATACACATGGATTCAAGGCTTTTCACATCC...AGAAAGGGAAGAACTGAAACATCTCGCAGTTATTAGATAAAGGGCTGGACCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR TCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCATGTTCTTGGCTCCTTaGTCATATCGCACAGTTGCA +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSMFLAP*SYRTVA
Trigger: TGCAACTGTGCGATATGATCAAGGAGCCAAGAACAT...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR TCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTTAGGCTCTAGCTCCTaGGTCTCAAGTTTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSLGSSS*VSSLQQ
Trigger: CTGCTGCAAACTTGAGACTCAGGAGCTAGAGCCTAA...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR TCA 90 bp GGTTACAACATCTTTGGCCCCACCCTTTCAAATTCATTCAGTCTGAGTTTTGCCTATTTGATGCTCGCTTaGGGAAACGAACAACCAGCT +
Preference number: 4 (lower is better)
Translates to: GYNIFGPTLSNSFSLSFAYLMLA*GNEQPA
Trigger: AGCTGGTTGTTCGTTTCCTCAAGCGAGCATCAAATA...GGCAAAACTCAGACTGAATGAATTTGAAAGGGTGGGGCCAAAGATGTTGTAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR TCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCATTCTCAGCTAGCCGCTaGAGTTCAGCTGTAACCATA +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSFSASR*SSAVTI
Trigger: TATGGTTACAGCTGAACTTCAGCGGCTAGCTGAGAA...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR TCA 90 bp ATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCCACTGCTTCTGTTTATaGTGCCAGTTGCCAAATTCA +
Preference number: 4 (lower is better)
Translates to: IQSEFCPCAWQTSISSGFHCFCL*CQLPNS
Trigger: TGAATTTGGCAACTGGCATCATAAACAGAAGCAGTG...GAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR TCA 90 bp TATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCCATCAAAACCCAGAAAGGAGCTGCCGGGACTaGAGTTTTTGTTGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: YIMHQLNVPTAKFHQNPERSCRD*SFCCSS
Trigger: ACTTGAACAACAAAAACTTCAGTCCCGGCAGCTCCT...TTCTGGGTTTTGATGGAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR TCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAAGGAGCTGCCGGGACTaGAGTTTTTGTTGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSRSCRD*SFCCSS
Trigger: ACTTGAACAACAAAAACTTCAGTCCCGGCAGCTCCT...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR TCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTTTGAAAGGAGGATCTaGAGCGGGTATTGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSFERRI*SGYWKL
Trigger: AAGCTTCCAATACCCGCTTCAGATCCTCCTTTCAAA...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR TCA 90 bp GGTTACAACATCTTTGGCCCCACCCTTTCAAATTCATTCAGTCTGAGTTTTGCCCAAATTCATTCAGTCTaGGTTTTGCCCTTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: GYNIFGPTLSNSFSLSFAQIHSV*VLPLCL
Trigger: CAGGCACAAGGGCAAAACTCAGACTGAATGAATTTG...GGCAAAACTCAGACTGAATGAATTTGAAAGGGTGGGGCCAAAGATGTTGTAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR GCA 90 bp ATAGTGATACTTCAAAACGTGAGAGCACGTGTGTCTACAAATATTATCGACAATGGGCTGTCAGAATGCTaGGTACTAGGCGACTGTCCG +
Preference number: 4 (lower is better)
Translates to: IVILQNVRARVSTNIIDNGLSEC*VLGDCP
Trigger: CGGACAGTCGCCTAGTACGCAGCATTCTGACAGCCC...ATTGTCGATAATATTTGTAGACACACGTGCTCTCACGTTTTGAAGTATCACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR GCA 90 bp ATCCATGTCTATATAGCCCTTAGAAAGTGTTCATTCATGCTCAGGGATATGAACCATGGGCTGTCAGAATaGTGCGTACTAGGCGACTGT +
Preference number: 4 (lower is better)
Translates to: IHVYIALRKCSFMLRDMNHGLSE*CVLGDC
Trigger: ACAGTCGCCTAGTACGCAGCATTCTGACAGCCCATG...GTTCATATCCCTGAGCATGAATGAACACTTTCTAAGGGCTATATAGACATGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR GCA 90 bp CTCAGACTGCCACACAGACACTATCCCCCAGTCACTCTTGTTTTTAATTCTTTCGTGATTAACTTTTTGTaGTTCAGAGAGGGTGCGCAG +
Preference number: 4 (lower is better)
Translates to: LRLPHRHYPPVTLVFNSFVINFL*FREGAQ
Trigger: CTGCGCACCCTCTCTGAAGCACAAAAAGTTAATCAC...GAAAGAATTAAAAACAAGAGTGACTGGGGGATAGTGTCTGTGTGGCAGTCTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR GCA 90 bp ACTTGTGATGAATGCTCCTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAACAAGTTCAAAACAACTGCTaGGATGAGGAACAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: TCDECSSFPLDPPKREEQVQNNC*DEEQRF
Trigger: AAACCTTTGTTCCTCATCGCAGCAGTTGTTTTGAAC...TTGTTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAGGAGCATTCATCACAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAGTATTTTGGCCTCATTaGCCTCAATCTGCTACTCCG +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSVFWPH*PQSATP
Trigger: CGGAGTAGCAGATTGAGGGCAATGAGGCCAAAATAC...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp TATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCCATCAAAACCCAGAATTCTCTAAGAAATCCTaGAGACTCCTCCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: YIMHQLNVPTAKFHQNPEFSKKS*RLLLGS
Trigger: GCTTCCCAGGAGGAGTCTGCAGGATTTCTTAGAGAA...TTCTGGGTTTTGATGGAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCATTCTCTAAGAAATCCTaGAGACTCCTCCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSFSKKS*RLLLGS
Trigger: GCTTCCCAGGAGGAGTCTGCAGGATTTCTTAGAGAA...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCCCTGAGTCTCAAGTTTaGAGCAGTGTCCACCTTTAT +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSPESQV*SSVHLY
Trigger: ATAAAGGTGGACACTGCTGCAAACTTGAGACTCAGG...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp TCATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTAATGCTATTCGGGCCTaGATTTTGCTAAGATTGCCA +
Preference number: 4 (lower is better)
Translates to: SFSLSFALVPGKLQSPQVNAIRA*ILLRLP
Trigger: TGGCAATCTTAGCAAAATGCAGGCCCGAATAGCATT...AACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR GCA 90 bp TTCATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTACCATCCTCAGTGAATaGTGGAGGTTATTTGATGCT +
Preference number: 4 (lower is better)
Translates to: FIQSEFCPCAWQTSISSGTILSE*WRLFDA
Trigger: AGCATCAAATAACCTCCAGCATTCACTGAGGATGGT...ACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR GCA 90 bp GACCTCACCACATGTTCAGGTAACATTAATTGGGATTTGGTGCTACCAGGCTACACCATCCTCAGTGAATaGTGGAGGTTATTTGATGCT +
Preference number: 4 (lower is better)
Translates to: DLTTCSGNINWDLVLPGYTILSE*WRLFDA
Trigger: AGCATCAAATAACCTCCAGCATTCACTGAGGATGGT...GTAGCCTGGTAGCACCAAATCCCAATTAATGTTACCTGAACATGTGGTGAGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR GCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCACAGTTCAGCCTCACTTaGTTGTCTGATGAACTCCTG +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSQFSLT*LSDELL
Trigger: CAGGAGTTCATCAGACAAGCAAGTGAGGCTGAACTG...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp AATACTATGGACCCCTTGAAGTGCTGGTGGATGCTTCACCCTCAATCATGCACCGACCAGAGGAGGAATTaGTATAAACTAATTTTGCCT +
Preference number: 4 (lower is better)
Translates to: NTMDPLKCWWMLHPQSCTDQRRN*YKLILP
Trigger: AGGCAAAATTAGTTTATAGCAATTCCTCCTCTGGTC...GGTGCATGATTGAGGGTGAAGCATCCACCAGCACTTCAAGGGGTCCATAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCGTGTTGGGAATTTTCTaGAGAGTAGCAGTAGGACCA +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSVLGIF*RVAVGP
Trigger: TGGTCCTACTGCTACTCTGCAGAAAATTCCCAACAC...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCCTGGCTATAGATGTGTaGAGCACTTTGGAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSLAIDV*STLEGR
Trigger: TCTTCCTTCCAAAGTGCTGCACACATCTATAGCCAG...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp TGTGCTCTGACGGGGTATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCGTTTATGATGCCAGTTaGCAAATTCAGGTTTGTTAC +
Preference number: 4 (lower is better)
Translates to: CALTGYIMHQLNVPTAKFVYDAS*QIQVCY
Trigger: GTAACAAACCTGAATTTGGCAACTGGCATCATAAAC...GAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATACCCCGTCAGAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGAAGCTGATAGCTGCCTaGTGTGGGGTGATACTTGTG +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSKLIAA*CGVILV
Trigger: CACAAGTATCACCCCACAGCAGGCAGCTATCAGCTT...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp GGTCCAGCCCTTTATCTAATAACTGCGAGATGTTTCAGTTCTTCCCTTTCTCAATATAAATGCTGTGACTaGCACCTAGAGGCGAACGGA +
Preference number: 4 (lower is better)
Translates to: GPALYLITARCFSSSLSQYKCCD*HLEANG
Trigger: TCCGTTCGCCTCTAGGTGGCAGTCACAGCATTTATA...TTGAGAAAGGGAAGAACTGAAACATCTCGCAGTTATTAGATAAAGGGCTGGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR GCA 90 bp TTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGATTCAGTCTGAGTTTTaGCCTTGTGCCTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: LCLANFNLLRFLSPYFLEIQSEF*PCAWQT
Trigger: AGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAAT...CTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp TATGACAGGACTTATAAATGCTGTGACTGCCACCTAGAGGCGAACGGAACACAGATCAAGCAATTTGGATaGCACAGATTCCTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: YDRTYKCCDCHLEANGTQIKQFG*HRFLSH
Trigger: ATGAGACAGGAATCTGTGCCATCCAAATTGCTTGAT...CTGTGTTCCGTTCGCCTCTAGGTGGCAGTCACAGCATTTATAAGTCCTGTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR CCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCCTGGATCAAGCAATTTaGATGGCACAGATTCCTGTC +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSLDQAI*MAQIPV
Trigger: GACAGGAATCTGTGCCATCCAAATTGCTTGATCCAG...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCTTCCAGGGAGATCTaGTTTGGATTGTTGATCAGG +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSSSREI*FGLLIR
Trigger: CCTGATCAACAATCCAAACCAGATCTCCCTGGAAGA...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCGTCAGATGCATGAACTaGTTCCGAATGTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSVRCMN*FRMFLA
Trigger: AGCCAAGAACATTCGGAACCAGTTCATGCATCTGAC...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCATCAGGTCTTCTACATaGGCCATCAATGCGGTTGTA +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSIRSST*AINAVV
Trigger: TACAACCGCATTGATGGCCCATGTAGAAGACCTGAT...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CCA 90 bp TGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGTCTCTATCTTCAATTCTaGCGCTCCATCAGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: CLANFNLLRFLSPYFLESLYLQF*RSISSH
Trigger: ATGACTGCTGATGGAGCGCCAGAATTGAAGATAGAG...ACTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp TGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGTTGGTTGGGTAATCACTaGGTATTTTGGCCTCATTGC +
Preference number: 4 (lower is better)
Translates to: CLANFNLLRFLSPYFLESWLGNH*VFWPHC
Trigger: GCAATGAGGCCAAAATACCCAGTGATTACCCAACCA...ACTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp CATACGGCTGACCTCACCACATGTTCAGGTAACATTAATTGGGATTTGGTGCTATGGTTGGGTAATCACTaGGTATTTTGGCCTCATTGC +
Preference number: 4 (lower is better)
Translates to: HTADLTTCSGNINWDLVLWLGNH*VFWPHC
Trigger: GCAATGAGGCCAAAATACCCAGTGATTACCCAACCA...TAGCACCAAATCCCAATTAATGTTACCTGAACATGTGGTGAGGTCAGCCGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CCA 90 bp GAAACTTGTGATGAATGCTCCTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAAGTAACAGATGACAAATaGGTGTTGGGAATTTTCTGC +
Preference number: 4 (lower is better)
Translates to: ETCDECSSFPLDPPKREEVTDDK*VLGIFC
Trigger: GCAGAAAATTCCCAACACCCATTTGTCATCTGTTAC...TTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAGGAGCATTCATCACAAGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGGATAAAGAAGAATGGTaGCAAGGCCCTGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSDKEEW*QGPGER
Trigger: CCTCTCTCCAGGGCCTTGCCACCATTCTTCTTTATC...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp TGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGTATGTGTGCAGCACTTTaGAAGGAAGAAAAGGGACCA +
Preference number: 4 (lower is better)
Translates to: CLANFNLLRFLSPYFLESMCAAL*KEEKGP
Trigger: TGGTCCCTTTTCTTCCTTCCAAAGTGCTGCACACAT...ACTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGGTTGATGTGGCTGGATaGAGAATACTGTCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSVDVAG*RILSRC
Trigger: GCAGCGAGACAGTATTCTCCATCCAGCCACATCAAC...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAAGGTTTGTTACCTGTTaGGTGAGGAGGTTGATGTGG +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSRFVTC*VRRLMW
Trigger: CCACATCAACCTCCTCACCCAACAGGTAACAAACCT...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp TTGCCAGAAGCTACGTGGATTTTATCTTTAGCCACATCTCTCAACTACATAAAGTGCTTCCAGGAGAGCTaGAGTGATTCTCGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: LPEATWILSLATSLNYIKCFQES*SDSREL
Trigger: AAGCTCCCGAGAATCACTCCAGCTCTCCTGGAAGCA...CTTTATGTAGTTGAGAGATGTGGCTAAAGATAAAATCCACGTAGCTTCTGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555018.3
CDS-3UTR CCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCATGGTACCACTTTTTGTaGCAGAGTGGTTGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSWYHFL*QSGWLL
Trigger: CAGAAGCCAACCACTCTGCCACAAAAAGTGGTACCA...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAGTATTGGAAGCTTTCTaGGATGTTGCCCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSVLEAF*DVALLS
Trigger: GCTCAGAAGGGCAACATCCCAGAAAGCTTCCAATAC...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR TCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAGGATGTGAAAAGCCTTaGATCCATGTGTATGCTGCA +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSGCEKP*IHVYAA
Trigger: TGCAGCATACACATGGATTCAAGGCTTTTCACATCC...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR TCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCAAACAACTGCTGCGATaGGGAACAAAGGTTTTACAG +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSKQLLR*GTKVLQ
Trigger: CTGTAAAACCTTTGTTCCTCATCGCAGCAGTTGTTT...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR TCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCATATTTGATGCTCGCTTaGGGAAACGAACAACCAGCT +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSYLMLA*GNEQPA
Trigger: AGCTGGTTGTTCGTTTCCTCAAGCGAGCATCAAATA...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR TCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGATGCTGGAGGTTATTTaGTGCTCGCTTGAGGAAACG +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSMLEVI*CSLEET
Trigger: CGTTTCCTCAAGCGAGCATCAAATAACCTCCAGCAT...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR TCA 90 bp GTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGTTAGAAATTTTAGAGTaGGTCCCCAGGAAGACACTA +
Preference number: 4 (lower is better)
Translates to: VPGKLQSPQVSFSIFPGELEILE*VPRKTL
Trigger: TAGTGTCTTCCTGGGGACTCACTCTAAAATTTCTAA...CTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR TCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTTCTCAGCTAGCCGCTaGAGTTCAGCTGTAACCATA +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSFSASR*SSAVTI
Trigger: TATGGTTACAGCTGAACTTCAGCGGCTAGCTGAGAA...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR TCA 90 bp GGTTACAACATCTTTGGCCCCACCCTTTCAAATTCATTCAGTCTGAGTTTTGCCCACTGCTTCTGTTTATaGTGCCAGTTGCCAAATTCA +
Preference number: 4 (lower is better)
Translates to: GYNIFGPTLSNSFSLSFAHCFCL*CQLPNS
Trigger: TGAATTTGGCAACTGGCATCATAAACAGAAGCAGTG...GGCAAAACTCAGACTGAATGAATTTGAAAGGGTGGGGCCAAAGATGTTGTAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR TCA 90 bp CTGATTAGAGCTAGTAGTCAGCTCATGTTCAGATGCCTGGTCCAGCCCTTTATCTTTCCTATAAAAACCTaGTTAGAGCTAGTAGTCAGC +
Preference number: 4 (lower is better)
Translates to: LIRASSQLMFRCLVQPFIFPIKT*LELVVS
Trigger: GCTGACTACTAGCTCTAATCAGGTTTTTATAGGAAA...GATAAAGGGCTGGACCAGGCATCTGAACATGAGCTGACTACTAGCTCTAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR TCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTTGGCCTTTGACGACTaGAACTGTGCAGATACTGGA +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSLAFDD*NCADTG
Trigger: TCCAGTATCTGCACAGTTTCAGTCGTCAAAGGCCAA...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR TCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCATTTGAAAGGAGGATCTaGAGCGGGTATTGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSFERRI*SGYWKL
Trigger: AAGCTTCCAATACCCGCTTCAGATCCTCCTTTCAAA...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp AACTGTGTAGCCACCACTCAAGTTCTGTATAGAACATTCCCAGCATGCCAGAAAGGTTATAGTCAGTGCTaGTTGGGTGAACTTCATGAA +
Preference number: 4 (lower is better)
Translates to: NCVATTQVLYRTFPACQKGYSQC*LGELHE
Trigger: TTCATGAAGTTCACCCAAGCAGCACTGACTATAACC...TTTCTGGCATGCTGGGAATGTTCTATACAGAACTTGAGTGGTGGCTACACAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR GCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCGGTTATAGTCAGTGCTaGTTGGGTGAACTTCATGAA +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSGYSQC*LGELHE
Trigger: TTCATGAAGTTCACCCAAGCAGCACTGACTATAACC...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR GCA 90 bp GGTCCAGCCCTTTATCTAATAACTGCGAGATGTTTCAGTTCTTCCCTTTCTCAAGTGATTAACTTTTTGTaGTTCAGAGAGGGTGCGCAG +
Preference number: 4 (lower is better)
Translates to: GPALYLITARCFSSSLSQVINFL*FREGAQ
Trigger: CTGCGCACCCTCTCTGAAGCACAAAAAGTTAATCAC...TTGAGAAAGGGAAGAACTGAAACATCTCGCAGTTATTAGATAAAGGGCTGGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR GCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCATCATATCGCACAGTTaGAAACCTAGCCAATCCTTC +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSIISHS*KPSQSF
Trigger: GAAGGATTGGCTAGGTTTGCAACTGTGCGATATGAT...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR GCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAATGCGGTTGTATCTCTaGCTTCTTGTTTCAGGTACC +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSMRLYL*LLVSGT
Trigger: GGTACCTGAAACAAGAAGGCAGAGATACAACCGCAT...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR GCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCAGAGTTCAAAACAACTaGTGCGATGAGGAACAAAGG +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSRVQNN*CDEEQR
Trigger: CCTTTGTTCCTCATCGCAGCAGTTGTTTTGAACTCT...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR GCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTTCTCTAAGAAATCCTaGAGACTCCTCCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSFSKKS*RLLLGS
Trigger: GCTTCCCAGGAGGAGTCTGCAGGATTTCTTAGAGAA...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCAATGCTATTCGGGCCTaGATTTTGCTAAGATTGCCA +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSNAIRA*ILLRLP
Trigger: TGGCAATCTTAGCAAAATGCAGGCCCGAATAGCATT...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp GTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGAGGGTGATCACCTTTTaGCCCACTATCAGAATAATT +
Preference number: 4 (lower is better)
Translates to: VPGKLQSPQVSFSIFPGERVITF*PTIRII
Trigger: AATTATTCTGATAGTGGGGCAAAAGGTGATCACCCT...CTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR GCA 90 bp ACTTGTGATGAATGCTCCTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAACAAATTTCTGTCGTCTGTTaGTGTTTAGGTGGCTTTATT +
Preference number: 4 (lower is better)
Translates to: TCDECSSFPLDPPKREEQISVVC*CLGGFI
Trigger: AATAAAGCCACCTAAACAGCAACAGACGACAGAAAT...TTGTTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAGGAGCATTCATCACAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCACTGGCTATAGATGTGTaGAGCACTTTGGAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSLAIDV*STLEGR
Trigger: TCTTCCTTCCAAAGTGCTGCACACATCTATAGCCAG...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp TTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGCTCAGTTCAGCTGACTaGTTGGAAGAAATACCACAA +
Preference number: 4 (lower is better)
Translates to: LCLANFNLLRFLSPYFLELSSAD*LEEIPQ
Trigger: TTGTGGTATTTCTTCCAAGCAGTCAGCTGAACTGAG...CTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR GCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCCTCAGTTCAGCTGACTaGTTGGAAGAAATACCACAA +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSLSSAD*LEEIPQ
Trigger: TTGTGGTATTTCTTCCAAGCAGTCAGCTGAACTGAG...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp GGTCCAGCCCTTTATCTAATAACTGCGAGATGTTTCAGTTCTTCCCTTTCTCAACAGGGAGATCTGGTTTaGATTGTTGATCAGGTAGAC +
Preference number: 4 (lower is better)
Translates to: GPALYLITARCFSSSLSQQGDLV*IVDQVD
Trigger: GTCTACCTGATCAACAATCCAAACCAGATCTCCCTG...TTGAGAAAGGGAAGAACTGAAACATCTCGCAGTTATTAGATAAAGGGCTGGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR CCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCACTCTATCTTCAATTCTaGCGCTCCATCAGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSLYLQF*RSISSH
Trigger: ATGACTGCTGATGGAGCGCCAGAATTGAAGATAGAG...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGGTGCAGCATGCAGCTTaGCCTTTGAATTCAGACTCT +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSVQHAA*PLNSDS
Trigger: AGAGTCTGAATTCAAAGGCCAAGCTGCATGCTGCAC...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp TGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGTAATCACTGGGTATTTTaGCCTCATTGCCCTCAATCT +
Preference number: 4 (lower is better)
Translates to: CLANFNLLRFLSPYFLESNHWVF*PHCPQS
Trigger: AGATTGAGGGCAATGAGGCCAAAATACCCAGTGATT...ACTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCAATCACTGGGTATTTTaGCCTCATTGCCCTCAATCT +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSNHWVF*PHCPQS
Trigger: AGATTGAGGGCAATGAGGCCAAAATACCCAGTGATT...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCATGGTTGGGTAATCACTaGGTATTTTGGCCTCATTGC +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSWLGNH*VFWPHC
Trigger: GCAATGAGGCCAAAATACCCAGTGATTACCCAACCA...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp GCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTAACATTCATTTCAGCTaGTTGGGTAATCACTGGGTA +
Preference number: 4 (lower is better)
Translates to: ALVPGKLQSPQVSFSIFPNIHFS*LGNHWV
Trigger: TACCCAGTGATTACCCAACCAGCTGAAATGAATGTT...AGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CCA 90 bp GACCTCACCACATGTTCAGGTAACATTAATTGGGATTTGGTGCTACCAGGCTACAACATTCATTTCAGCTaGTTGGGTAATCACTGGGTA +
Preference number: 4 (lower is better)
Translates to: DLTTCSGNINWDLVLPGYNIHFS*LGNHWV
Trigger: TACCCAGTGATTACCCAACCAGCTGAAATGAATGTT...GTAGCCTGGTAGCACCAAATCCCAATTAATGTTACCTGAACATGTGGTGAGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CCA 90 bp GACCTCACCACATGTTCAGGTAACATTAATTGGGATTTGGTGCTACCAGGCTACGTAACAGATGACAAATaGGTGTTGGGAATTTTCTGC +
Preference number: 4 (lower is better)
Translates to: DLTTCSGNINWDLVLPGYVTDDK*VLGIFC
Trigger: GCAGAAAATTCCCAACACCCATTTGTCATCTGTTAC...GTAGCCTGGTAGCACCAAATCCCAATTAATGTTACCTGAACATGTGGTGAGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CCA 90 bp GTAGTCAGCTCATGTTCAGATGCCTGGTCCAGCCCTTTATCTAATAACTGCGAGGCCTTCTTTTATCCATaGTATTTCCCATCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: VVSSCSDAWSSPLSNNCEAFFYP*YFPSSN
Trigger: ATTGGAAGATGGGAAATACCATGGATAAAAGAAGGC...CTCGCAGTTATTAGATAAAGGGCTGGACCAGGCATCTGAACATGAGCTGACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR CCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAAAACTGTGCAGATACTaGACGCTGAGGTTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSKLCRY*TLRFLE
Trigger: TTCCAGAAACCTCAGCGTCCAGTATCTGCACAGTTT...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CCA 90 bp ATCCATGTCTATATAGCCCTTAGAAAGTGTTCATTCATGCTCAGGGATATGAACATTAGCCGGGCATGGTaGTGCAAGCTTGTATTCCCA +
Preference number: 4 (lower is better)
Translates to: IHVYIALRKCSFMLRDMNISRAW*CKLVFP
Trigger: TGGGAATACAAGCTTGCACCACCATGCCCGGCTAAT...GTTCATATCCCTGAGCATGAATGAACACTTTCTAAGGGCTATATAGACATGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR CCA 90 bp GGTTACAACATCTTTGGCCCCACCCTTTCAAATTCATTCAGTCTGAGTTTTGCCAGGTTACAACATCTTTaGCCCCACCCTTTCAAATTC +
Preference number: 4 (lower is better)
Translates to: GYNIFGPTLSNSFSLSFARLQHL*PHPFKF
Trigger: GAATTTGAAAGGGTGGGGCCAAAGATGTTGTAACCT...GGCAAAACTCAGACTGAATGAATTTGAAAGGGTGGGGCCAAAGATGTTGTAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CCA 90 bp TTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGTCAGGTAACATTAATTaGGATTTGGTGCTACCAGGC +
Preference number: 4 (lower is better)
Translates to: LCLANFNLLRFLSPYFLESGNIN*DLVLPG
Trigger: GCCTGGTAGCACCAAATCCCAATTAATGTTACCTGA...CTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
3UTR CAA 72 bp TCAGACTGCCACACAGACACTATCCCCCAGTCACTCTaGTTTTTAATTCTTTCATTTCCCACAAACAACAGG +
Preference number: 4 (lower is better)
Translates to: SDCHTDTIPQSL*FLILSFPTNNR
Trigger: CCTGTTGTTTGTGGGAAATGAAAGAATTAAAAACAAGAGTGACTGGGGGATAGTGTCTGTGTGGCAGTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR TCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCCTTCATAGAGATAGATaGCAAGAGGATCATAGGAAG +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSLHRDR*QEDHRK
Trigger: CTTCCTATGATCCTCTTGTCATCTATCTCTATGAAG...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR TCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCACAGCATATAGTTCATTaGGGTCTTATGCTCGAGGTA +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSQHIVH*GLMLEV
Trigger: TACCTCGAGCATAAGACCTCAATGAACTATATGCTG...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR TCA 90 bp TTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGTTAGAAATTTTAGAGTaGGTCCCCAGGAAGACACTA +
Preference number: 4 (lower is better)
Translates to: LCLANFNLLRFLSPYFLELEILE*VPRKTL
Trigger: TAGTGTCTTCCTGGGGACTCACTCTAAAATTTCTAA...CTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR TCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCACACTGCTTCTGTTTATaGTGCCAGTTGCCAAATTCA +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSHCFCL*CQLPNS
Trigger: TGAATTTGGCAACTGGCATCATAAACAGAAGCAGTG...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR TCA 90 bp AAGCTGCTTACATTATTGCCAGAAGCTACGTGGATTTTATCTTTAGCCACATCTTTCCCACTTCCCAAATaGGCATTGTTCAGCGAGGTT +
Preference number: 4 (lower is better)
Translates to: KLLTLLPEATWILSLATSFPLPK*ALFSEV
Trigger: AACCTCGCTGAACAATGCTCATTTGGGAAGTGGGAA...AGATGTGGCTAAAGATAAAATCCACGTAGCTTCTGGCAATAATGTAAGCAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555018.3
CDS-3UTR GCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGGTGATTAACTTTTTGTaGTTCAGAGAGGGTGCGCAG +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSVINFL*FREGAQ
Trigger: CTGCGCACCCTCTCTGAAGCACAAAAAGTTAATCAC...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR GCA 90 bp TATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCCATCAAAACCCAGAAATCATATCGCACAGTTaGAAACCTAGCCAATCCTTC +
Preference number: 4 (lower is better)
Translates to: YIMHQLNVPTAKFHQNPEIISHS*KPSQSF
Trigger: GAAGGATTGGCTAGGTTTGCAACTGTGCGATATGAT...TTCTGGGTTTTGATGGAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR GCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGGAGATAGGCAGAGAATaGTATTCGGGCCTGCATTTT +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSEIGRE*YSGLHF
Trigger: AAAATGCAGGCCCGAATAGCATTCTCTGCCTATCTC...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp TGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGTAGGGTGATCACCTTTTaGCCCACTATCAGAATAATT +
Preference number: 4 (lower is better)
Translates to: CLANFNLLRFLSPYFLESRVITF*PTIRII
Trigger: AATTATTCTGATAGTGGGGCAAAAGGTGATCACCCT...ACTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR GCA 90 bp ATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCGTTTATGATGCCAGTTaGCAAATTCAGGTTTGTTAC +
Preference number: 4 (lower is better)
Translates to: IQSEFCPCAWQTSISSGFVYDAS*QIQVCY
Trigger: GTAACAAACCTGAATTTGGCAACTGGCATCATAAAC...GAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR GCA 90 bp TTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTGTTTATGATGCCAGTTaGCAAATTCAGGTTTGTTAC +
Preference number: 4 (lower is better)
Translates to: FSLSFALVPGKLQSPQVSVYDAS*QIQVCY
Trigger: GTAACAAACCTGAATTTGGCAACTGGCATCATAAAC...AGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR GCA 90 bp TGTTCAGGTAACATTAATTGGGATTTGGTGCTACCAGGCTACCCAGTCCTGATGGGAAATTCTACAACCTaGACCATTATTCATTGTCCA +
Preference number: 4 (lower is better)
Translates to: CSGNINWDLVLPGYPVLMGNSTT*TIIHCP
Trigger: TGGACAATGAATAATGGTGCAGGTTGTAGAATTTCC...CATCAGGACTGGGTAGCCTGGTAGCACCAAATCCCAATTAATGTTACCTGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR GCA 90 bp TATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCCATCAAAACCCAGAAGAAACTTGTGATGAATaGTCCTCTTTCCCCCTAGAT +
Preference number: 4 (lower is better)
Translates to: YIMHQLNVPTAKFHQNPEETCDE*SSFPLD
Trigger: ATCTAGGGGGAAAGAGGAGCATTCATCACAAGTTTC...TTCTGGGTTTTGATGGAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCAGTCCACATGATGCATaGATGATCCTCTTGACTTAT +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSSPHDA*MILLTY
Trigger: ATAAGTCAAGAGGATCATCCATGCATCATGTGGACT...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGATGGAATACCAAAACTaGAATTCTCCTGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSMEYQN*NSPAAS
Trigger: GGAGGCTGCAGGAGAATTCCAGTTTTGGTATTCCAT...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CCA 90 bp CCTGGTCCAGCCCTTTATCTAATAACTGCGAGATGTTTCAGTTCTTCCCTTTCTAGAATAGCGTCGGCATaGAATACCAAAACTGGAATT +
Preference number: 4 (lower is better)
Translates to: PGPALYLITARCFSSSLSRIASA*NTKTGI
Trigger: AATTCCAGTTTTGGTATTCCATGCCGACGCTATTCT...AGAAAGGGAAGAACTGAAACATCTCGCAGTTATTAGATAAAGGGCTGGACCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR CCA 90 bp GGTCCAGCCCTTTATCTAATAACTGCGAGATGTTTCAGTTCTTCCCTTTCTCAAATAGTCAGTGCTGCTTaGGTGAACTTCATGAAATCC +
Preference number: 4 (lower is better)
Translates to: GPALYLITARCFSSSLSQIVSAA*VNFMKS
Trigger: GGATTTCATGAAGTTCACCCAAGCAGCACTGACTAT...TTGAGAAAGGGAAGAACTGAAACATCTCGCAGTTATTAGATAAAGGGCTGGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR CCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAATAGTCAGTGCTGCTTaGGTGAACTTCATGAAATCC +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSIVSAA*VNFMKS
Trigger: GGATTTCATGAAGTTCACCCAAGCAGCACTGACTAT...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CCA 90 bp CCAGGGCTCAAACTCAAAATCTCAGTTAAGAATATGACAGGACTTATAAATGCTAAGAAGGGCTTCAGGTaGGATCCTGTCCACATTAGG +
Preference number: 4 (lower is better)
Translates to: PGLKLKISVKNMTGLINAKKGFR*DPVHIR
Trigger: CCTAATGTGGACAGGATCCCACCTGAAGCCCTTCTT...AGCATTTATAAGTCCTGTCATATTCTTAACTGAGATTTTGAGTTTGAGCCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR CCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGCAGGGAGATCTGGTTTaGATTGTTGATCAGGTAGAC +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSQGDLV*IVDQVD
Trigger: GTCTACCTGATCAACAATCCAAACCAGATCTCCCTG...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGGGTTCCGAATGTTCTTaGCTCCTTGATCATATCGCA +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSGSECS*LLDHIA
Trigger: TGCGATATGATCAAGGAGCCAAGAACATTCGGAACC...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTGGAAGACTCAAAGGTaGGATAAATTGGCCGAGTTG +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSWKTQR*DKLAEL
Trigger: CAACTCGGCCAATTTATCCCACCTTTGAGTCTTCCA...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGCTCTATCTTCAATTCTaGCGCTCCATCAGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSLYLQF*RSISSH
Trigger: ATGACTGCTGATGGAGCGCCAGAATTGAAGATAGAG...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCAACATTCATTTCAGCTaGTTGGGTAATCACTGGGTA +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSNIHFS*LGNHWV
Trigger: TACCCAGTGATTACCCAACCAGCTGAAATGAATGTT...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGATGTGTGCAGCACTTTaGAAGGAAGAAAAGGGACCA +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSMCAAL*KEEKGP
Trigger: TGGTCCCTTTTCTTCCTTCCAAAGTGCTGCACACAT...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp TTCATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTGCTGTAACCATACTTTaGTTGTACCGTTTGCTATAT +
Preference number: 4 (lower is better)
Translates to: FIQSEFCPCAWQTSISSGAVTIL*LYRLLY
Trigger: ATATAGCAAACGGTACAACCAAAGTATGGTTACAGC...ACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR TCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGCAGCATATAGTTCATTaGGGTCTTATGCTCGAGGTA +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSQHIVH*GLMLEV
Trigger: TACCTCGAGCATAAGACCTCAATGAACTATATGCTG...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR TCA 90 bp AACTGTGTAGCCACCACTCAAGTTCTGTATAGAACATTCCCAGCATGCCAGAAATCATGTACCTTTAAATaGAGCAAAGCAGCTACAAAG +
Preference number: 4 (lower is better)
Translates to: NCVATTQVLYRTFPACQKSCTFK*SKAATK
Trigger: CTTTGTAGCTGCTTTGCTTCATTTAAAGGTACATGA...TTTCTGGCATGCTGGGAATGTTCTATACAGAACTTGAGTGGTGGCTACACAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR GCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGAATGCTATTCGGGCCTaGATTTTGCTAAGATTGCCA +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSNAIRA*ILLRLP
Trigger: TGGCAATCTTAGCAAAATGCAGGCCCGAATAGCATT...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGACCATCCTCAGTGAATaGTGGAGGTTATTTGATGCT +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSTILSE*WRLFDA
Trigger: AGCATCAAATAACCTCCAGCATTCACTGAGGATGGT...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCATTTCTGTCGTCTGTTaGTGTTTAGGTGGCTTTATT +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSISVVC*CLGGFI
Trigger: AATAAAGCCACCTAAACAGCAACAGACGACAGAAAT...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp TTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGGACCAGAGGAGGAATTaGTATAAACTAATTTTGCCT +
Preference number: 4 (lower is better)
Translates to: LCLANFNLLRFLSPYFLEDQRRN*YKLILP
Trigger: AGGCAAAATTAGTTTATAGCAATTCCTCCTCTGGTC...CTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR GCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCGTTTATGATGCCAGTTaGCAAATTCAGGTTTGTTAC +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSVYDAS*QIQVCY
Trigger: GTAACAAACCTGAATTTGGCAACTGGCATCATAAAC...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCGGAAATTCTACAACCTaGACCATTATTCATTGTCCA +
Preference number: 4 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSGNSTT*TIIHCP
Trigger: TGGACAATGAATAATGGTGCAGGTTGTAGAATTTCC...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp ACTATCCCCCAGTCACTCTTGTTTTTAATTCTTTCATTTCCCACAAACAACAGGATGGAATACCAAAACTaGAATTCTCCTGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: TIPQSLLFLILSFPTNNRMEYQN*NSPAAS
Trigger: GGAGGCTGCAGGAGAATTCCAGTTTTGGTATTCCAT...CCTGTTGTTTGTGGGAAATGAAAGAATTAAAAACAAGAGTGACTGGGGGATAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR CCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAAGAATAGCGTCGGCATaGAATACCAAAACTGGAATT +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSRIASA*NTKTGI
Trigger: AATTCCAGTTTTGGTATTCCATGCCGACGCTATTCT...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGATAATCCTCCACTTCTaGATCGTCACAACTGACGTA +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSIILHF*IVTTDV
Trigger: TACGTCAGTTGTGACGATCCAGAAGTGGAGGATTAT...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGAATCACTGGGTATTTTaGCCTCATTGCCCTCAATCT +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSNHWVF*PHCPQS
Trigger: AGATTGAGGGCAATGAGGCCAAAATACCCAGTGATT...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp GGTTACAACATCTTTGGCCCCACCCTTTCAAATTCATTCAGTCTGAGTTTTGCCCTGTTGCTGTTTAGGTaGCTTTATTTTCACTTCTTC +
Preference number: 4 (lower is better)
Translates to: GYNIFGPTLSNSFSLSFALLLFR*LYFHFF
Trigger: GAAGAAGTGAAAATAAAGCCACCTAAACAGCAACAG...GGCAAAACTCAGACTGAATGAATTTGAAAGGGTGGGGCCAAAGATGTTGTAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAGTAACAGATGACAAATaGGTGTTGGGAATTTTCTGC +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSVTDDK*VLGIFC
Trigger: GCAGAAAATTCCCAACACCCATTTGTCATCTGTTAC...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp ATCCATGTCTATATAGCCCTTAGAAAGTGTTCATTCATGCTCAGGGATATGAACAAAATTAGCCGGGCATaGTGGTGCAAGCTTGTATTC +
Preference number: 4 (lower is better)
Translates to: IHVYIALRKCSFMLRDMNKISRA*WCKLVF
Trigger: GAATACAAGCTTGCACCACCATGCCCGGCTAATTTT...GTTCATATCCCTGAGCATGAATGAACACTTTCTAAGGGCTATATAGACATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR TCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTTAGAAATTTTAGAGTaGGTCCCCAGGAAGACACTA +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSLEILE*VPRKTL
Trigger: TAGTGTCTTCCTGGGGACTCACTCTAAAATTTCTAA...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTTAGGTTATAGTCAGTaGTGCTTGGGTGAACTTCAT +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSLGYSQ*CLGELH
Trigger: ATGAAGTTCACCCAAGCAGCACTGACTATAACCTAA...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR GCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGGTTCAAAACAACTGCTaGGATGAGGAACAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSVQNNC*DEEQRF
Trigger: AAACCTTTGTTCCTCATCGCAGCAGTTGTTTTGAAC...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR GCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGAGGGTGATCACCTTTTaGCCCACTATCAGAATAATT +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSRVITF*PTIRII
Trigger: AATTATTCTGATAGTGGGGCAAAAGGTGATCACCCT...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAATTTCTGTCGTCTGTTaGTGTTTAGGTGGCTTTATT +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSISVVC*CLGGFI
Trigger: AATAAAGCCACCTAAACAGCAACAGACGACAGAAAT...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAGACCAGAGGAGGAATTaGTATAAACTAATTTTGCCT +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSDQRRN*YKLILP
Trigger: AGGCAAAATTAGTTTATAGCAATTCCTCCTCTGGTC...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp AATTTCCTTCCCACTTCCCAAATGAGCATTGTTCAGCGAGGTTGTTTGAGTTCAGTTTATGATGCCAGTTaGCAAATTCAGGTTTGTTAC +
Preference number: 4 (lower is better)
Translates to: NFLPTSQMSIVQRGCLSSVYDAS*QIQVCY
Trigger: GTAACAAACCTGAATTTGGCAACTGGCATCATAAAC...TGAACTCAAACAACCTCGCTGAACAATGCTCATTTGGGAAGTGGGAAGGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555018.3
CDS-3UTR GCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAGGAAATTCTACAACCTaGACCATTATTCATTGTCCA +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSGNSTT*TIIHCP
Trigger: TGGACAATGAATAATGGTGCAGGTTGTAGAATTTCC...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR GCA 90 bp CCTGGTCCAGCCCTTTATCTAATAACTGCGAGATGTTTCAGTTCTTCCCTTTCTCCTTTATCTAATAACTaGGAGATGTTTCAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: PGPALYLITARCFSSSLSPLSNN*EMFQFF
Trigger: GAAGAACTGAAACATCTCGCAGTTATTAGATAAAGG...AGAAAGGGAAGAACTGAAACATCTCGCAGTTATTAGATAAAGGGCTGGACCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR CCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGATCAAGCAATTTGGATaGCACAGATTCCTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSIKQFG*HRFLSH
Trigger: ATGAGACAGGAATCTGTGCCATCCAAATTGCTTGAT...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CCA 90 bp AGTTTTGGTAGTCTCCAATGTTCCCAGGGCTCAAACTCAAAATCTCAGTTAAGAAGTCCACATGATGCATaGATGATCCTCTTGACTTAT +
Preference number: 4 (lower is better)
Translates to: SFGSLQCSQGSNSKSQLRSPHDA*MILLTY
Trigger: ATAAGTCAAGAGGATCATCCATGCATCATGTGGACT...TCTTAACTGAGATTTTGAGTTTGAGCCCTGGGAACATTGGAGACTACCAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR CCA 90 bp ATCCATGTCTATATAGCCCTTAGAAAGTGTTCATTCATGCTCAGGGATATGAACATAGTCAGTGCTGCTTaGGTGAACTTCATGAAATCC +
Preference number: 4 (lower is better)
Translates to: IHVYIALRKCSFMLRDMNIVSAA*VNFMKS
Trigger: GGATTTCATGAAGTTCACCCAAGCAGCACTGACTAT...GTTCATATCCCTGAGCATGAATGAACACTTTCTAAGGGCTATATAGACATGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR CCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGCACTTCCAACAACCATaGCTTCAGAGTAGAATCTAT +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSHFQQP*LQSRIY
Trigger: ATAGATTCTACTCTGAAGCCATGGTTGTTGGAAGTG...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCACTGTTGCTGTTTAGGTaGCTTTATTTTCACTTCTTC +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSLLLFR*LYFHFF
Trigger: GAAGAAGTGAAAATAAAGCCACCTAAACAGCAACAG...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAGCTGTAACCATACTTTaGTTGTACCGTTTGCTATAT +
Preference number: 4 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSAVTIL*LYRLLY
Trigger: ATATAGCAAACGGTACAACCAAAGTATGGTTACAGC...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
3UTR CAA 72 bp GTGTTCATTCATGCTCAGGGATATGAACACAACAGTTaGATTTGCAGAGTGCTGTTCCGTACCAGAAAAATT +
Preference number: 4 (lower is better)
Translates to: VFIHAQGYEHNS*ICRVLFRTRKI
Trigger: AATTTTTCTGGTACGGAACAGCACTCTGCAAATCAAACTGTTGTGTTCATATCCCTGAGCATGAATGAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR TCA 90 bp ATTATTGCCAGAAGCTACGTGGATTTTATCTTTAGCCACATCTCTCAACTACATTTGAGTTCAGTTATATaGAACTGCTTCCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: IIARSYVDFIFSHISQLHLSSVI*NCFQES
Trigger: GCTCTCCTGGAAGCAGTTTCATATAACTGAACTCAA...ATGTAGTTGAGAGATGTGGCTAAAGATAAAATCCACGTAGCTTCTGGCAATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555018.3
CDS-3UTR GCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGATTTCTGTCGTCTGTTaGTGTTTAGGTGGCTTTATT +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSISVVC*CLGGFI
Trigger: AATAAAGCCACCTAAACAGCAACAGACGACAGAAAT...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp ATCCATGTCTATATAGCCCTTAGAAAGTGTTCATTCATGCTCAGGGATATGAACATCAAGCAATTTGGATaGCACAGATTCCTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: IHVYIALRKCSFMLRDMNIKQFG*HRFLSH
Trigger: ATGAGACAGGAATCTGTGCCATCCAAATTGCTTGAT...GTTCATATCCCTGAGCATGAATGAACACTTTCTAAGGGCTATATAGACATGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR CCA 90 bp ATAGTGATACTTCAAAACGTGAGAGCACGTGTGTCTACAAATATTATCGACAATCTGGATCAAGCAATTTaGATGGCACAGATTCCTGTC +
Preference number: 4 (lower is better)
Translates to: IVILQNVRARVSTNIIDNLDQAI*MAQIPV
Trigger: GACAGGAATCTGTGCCATCCAAATTGCTTGATCCAG...ATTGTCGATAATATTTGTAGACACACGTGCTCTCACGTTTTGAAGTATCACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR CCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGCTGTTGCTGTTTAGGTaGCTTTATTTTCACTTCTTC +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSLLLFR*LYFHFF
Trigger: GAAGAAGTGAAAATAAAGCCACCTAAACAGCAACAG...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CCA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGGCTGTAACCATACTTTaGTTGTACCGTTTGCTATAT +
Preference number: 4 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSAVTIL*LYRLLY
Trigger: ATATAGCAAACGGTACAACCAAAGTATGGTTACAGC...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR TCA 90 bp AGAAGCTACGTGGATTTTATCTTTAGCCACATCTCTCAACTACATAAAGGAAATCACTGCTTCTGTTTATaGTGCCAGTTGCCAAATTCA +
Preference number: 4 (lower is better)
Translates to: RSYVDFIFSHISQLHKGNHCFCL*CQLPNS
Trigger: TGAATTTGGCAACTGGCATCATAAACAGAAGCAGTG...ATTTCCTTTATGTAGTTGAGAGATGTGGCTAAAGATAAAATCCACGTAGCTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555018.3
CDS-3UTR TCA 90 bp TTGCCAGAAGCTACGTGGATTTTATCTTTAGCCACATCTCTCAACTACATAAAGTTCAGCGAGGTTGTTTaGGTTCAGTTATATGAAACT +
Preference number: 4 (lower is better)
Translates to: LPEATWILSLATSLNYIKFSEVV*VQLYET
Trigger: AGTTTCATATAACTGAACTCAAACAACCTCGCTGAA...CTTTATGTAGTTGAGAGATGTGGCTAAAGATAAAATCCACGTAGCTTCTGGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555018.3
CDS-3UTR CCA 90 bp ATTATTGCCAGAAGCTACGTGGATTTTATCTTTAGCCACATCTCTCAACTACATTTGCCAGAAGCTACGTaGATTTTATCTTTAGCCACA +
Preference number: 4 (lower is better)
Translates to: IIARSYVDFIFSHISQLHLPEAT*ILSLAT
Trigger: TGTGGCTAAAGATAAAATCCACGTAGCTTCTGGCAA...ATGTAGTTGAGAGATGTGGCTAAAGATAAAATCCACGTAGCTTCTGGCAATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555018.3
CDS-3UTR GCA 90 bp ATAGTGATACTTCAAAACGTGAGAGCACGTGTGTCTACAAATATTATCGACAATTTAGGTTATAGTCAGTaGTGCTTGGGTGAACTTCAT +
Preference number: 4 (lower is better)
Translates to: IVILQNVRARVSTNIIDNLGYSQ*CLGELH
Trigger: ATGAAGTTCACCCAAGCAGCACTGACTATAACCTAA...ATTGTCGATAATATTTGTAGACACACGTGCTCTCACGTTTTGAAGTATCACTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR GCA 90 bp AGAAGCTACGTGGATTTTATCTTTAGCCACATCTCTCAACTACATAAAGGAAATAGCTGCTTACATTATTaGCAGAAGCTACGTGGATTT +
Preference number: 4 (lower is better)
Translates to: RSYVDFIFSHISQLHKGNSCLHY*QKLRGF
Trigger: AAATCCACGTAGCTTCTGGCAATAATGTAAGCAGCT...ATTTCCTTTATGTAGTTGAGAGATGTGGCTAAAGATAAAATCCACGTAGCTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555018.3
CDS TCA 90 bp GATTCAACGCGGCGCGCCCGGAAGCCAACAGCTACTCCCGGGCTCTaGGCGGGAAGTCCTGCTGCAGGCGCCAGCCCGGACCCGGGAATG +
Preference number: 5 (lower is better)
Translates to: DSTRRARKPTATPGL*AGSPAAGASPDPGM
Trigger: CATTCCCGGGTCCGGGCTGGCGCCTGCAGCAGGACTTCCCGCTCAGAGCCCGGGAGTAGCTGTTGGCTTCCGGGCGCGCCGCGTTGAATC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556685.1
CDS GCA 90 bp CTCCCTCCTCCTTCCCCAGGAAGGCTCAGGGCAGCCGCCGACGGCTaGTTCCCCGGTTACTACAACAACCAACAAGCAACCGCCCGCTCG +
Preference number: 5 (lower is better)
Translates to: LPPPSPGRLRAAADG*FPGYYNNQQATARS
Trigger: CGAGCGGGCGGTTGCTTGTTGGTTGTTGTAGTAACCGGGGAAGCAGCCGTCGGCGGCTGCCCTGAGCCTTCCTGGGGAAGGAGGAGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556685.1
ENST00000556977.5
CDS TCA 90 bp CTGCTGTCAACCAGCTGCAGCCGGGAGACTGCCAAAGCGCTGCAGTaGCTAGGCAGCGCCCTACAGAGCCGTCTGGGAGGGGATTACCAG +
Preference number: 5 (lower is better)
Translates to: LLSTSCSRETAKALQ*LGSALQSRLGGDYQ
Trigger: CTGGTAATCCCCTCCCAGACGGCTCTGTAGGGCGCTGCCTAGTCACTGCAGCGCTTTGGCAGTCTCCCGGCTGCAGCTGGTTGACAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS CCA 90 bp GTAGAGCTGGTGATGGGCACAAAGGCTGCAGGGTTAAGGCTGCTCTaGAGTCCATTCAGCTGCCCTTCCGCGGAGGACCCTTTGGAAGCT +
Preference number: 5 (lower is better)
Translates to: VELVMGTKAAGLRLL*SPFSCPSAEDPLEA
Trigger: AGCTTCCAAAGGGTCCTCCGCGGAAGGGCAGCTGAATGGACTCCAGAGCAGCCTTAACCCTGCAGCCTTTGTGCCCATCACCAGCTCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298832.14
ENST00000554972.1
ENST00000557219.1
CDS-3UTR CAA 90 bp GTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTGAACAGGTTGTGGTTGGGTGGGGGTTaGGGAACCAGGGAGGCGCAA +
Preference number: 5 (lower is better)
Translates to: VLVDASPSIMHPGVVNRLWLGGG*GTREAQ
Trigger: TTGCGCCTCCCTGGTTCCCAAACCCCCACCCAACCA...CAACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS TCA 90 bp ACCAAGCACAGAACCACCCAACTTCCCTGGCCCTTTCTCCCGGGCTaGGCCCACGAGGTTTTTCATTTCCGCATCACTGGCAGAGAGTGG +
Preference number: 5 (lower is better)
Translates to: TKHRTTQLPWPFLPG*AHEVFHFRITGREW
Trigger: CCACTCTCTGCCAGTGATGCGGAAATGAAAAACCTCGTGGGCTCAGCCCGGGAGAAAGGGCCAGGGAAGTTGGGTGGTTCTGTGCTTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298832.14
ENST00000554148.5
ENST00000555422.5
ENST00000557636.5
CDS CCA 90 bp GTTGGGTGGGGGTTTGGGAACCAGGGAGGCGCAAGAACTTGGAGGTaGTACCACTTTTTGTGGCAGAGTGGTTGGCTTCTGGCCACTAGC +
Preference number: 5 (lower is better)
Translates to: VGWGFGNQGGARTWR*YHFLWQSGWLLATS
Trigger: GCTAGTGGCCAGAAGCCAACCACTCTGCCACAAAAAGTGGTACCACCTCCAAGTTCTTGCGCCTCCCTGGTTCCCAAACCCCCACCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000556893.5
ENST00000557219.1
ENST00000557636.5
CDS CCA 90 bp TTCGTGGTTGGGTGGGGGTTTGGGAACCAGGGAGGCGCAAGAACTTaGAGGTGGTACCACTTTTTGTGGCAGAGTGGTTGGCTTCTGGCC +
Preference number: 5 (lower is better)
Translates to: FVVGWGFGNQGGART*RWYHFLWQSGWLLA
Trigger: GGCCAGAAGCCAACCACTCTGCCACAAAAAGTGGTACCACCTCCAAGTTCTTGCGCCTCCCTGGTTCCCAAACCCCCACCCAACCACGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000556893.5
ENST00000557219.1
ENST00000557636.5
CDS-3UTR CAA 90 bp GTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTGAACAGGTTGTGCCCTTCTGAGCACTaGTTCGTGGTTGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: VLVDASPSIMHPGVVNRLCPSEH*FVVGWG
Trigger: CCCCCACCCAACCACGAACAAGTGCTCAGAAGGGCA...CAACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS TCA 90 bp GGCTATCACTGTGGTTGCTGGACTTCAAGAGGCCTGGCACAAACGTaGCTACCCTGGGTACTCCAAGAAGGCAGCCAAATGGGCCCTGTC +
Preference number: 5 (lower is better)
Translates to: GYHCGCWTSRGLAQT*LPWVLQEGSQMGPV
Trigger: GACAGGGCCCATTTGGCTGCCTTCTTGGAGTACCCAGGGTAGTCACGTTTGTGCCAGGCCTCTTGAAGTCCAGCAACCACAGTGATAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554878.1
CDS-3UTR CAA 90 bp GCAGCAGTAAAGGGACAGAGAAGACCTAAGCAGTTTGGGGGCATGGGGCAAAGGAGCACTTGTTCGTGGTaGGGTGGGGGTTTGGGAACC +
Preference number: 5 (lower is better)
Translates to: AAVKGQRRPKQFGGMGQRSTCSW*GGGLGT
Trigger: GGTTCCCAAACCCCCACCCAACCACGAACAAGTGCT...CCTTTGCCCCATGCCCCCAAACTGCTTAGGTCTTCTCTGTCCCTTTACTGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS CCA 90 bp CTTTCTCCCGGGCTGAGCCCACGAGGTTTTTCATTTCCGCATCACTaGCAGAGAGTGGACGGCAACGCTGAGGTTTCTGGAAAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: LSPGLSPRGFSFPHH*QRVDGNAEVSGKGF
Trigger: GAAACCCTTTCCAGAAACCTCAGCGTTGCCGTCCACTCTCTGCCAGTGATGCGGAAATGAAAAACCTCGTGGGCTCAGCCCGGGAGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298832.14
ENST00000555422.5
CDS CCA 90 bp GGCTTGGGATGTTCTGTGCCCCGGGATGTAGGCAGGGAGAAGCACTaGCAGAGACTGTGTTCAGTAAAATTGTTGGCTGGTGAGGCATGC +
Preference number: 5 (lower is better)
Translates to: GLGCSVPRDVGREKH*QRLCSVKLLAGEAC
Trigger: GCATGCCTCACCAGCCAACAATTTTACTGAACACAGTCTCTGCCAGTGCTTCTCCCTGCCTACATCCCGGGGCACAGAACATCCCAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS CCA 90 bp CCTTTGGAAGCTTTCTGGGATGTTGCCCTTCTGAGCACTTGTTCGTaGTTGGGTGGGGGTTTGGGAACCAGGGAGGCGCAAGAACTTGGA +
Preference number: 5 (lower is better)
Translates to: PLEAFWDVALLSTCS*LGGGLGTREAQELG
Trigger: TCCAAGTTCTTGCGCCTCCCTGGTTCCCAAACCCCCACCCAACCACGAACAAGTGCTCAGAAGGGCAACATCCCAGAAAGCTTCCAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298832.14
ENST00000554972.1
ENST00000557219.1
CDS CCA 90 bp GACGCTGAGGTTTCTGGAAAGGGTTTCGCCTGGAAGACTCAAAGGTaGGATAAATTGGCCGAGTTGATGCCCGCTGGGCAGGATCTTGGC +
Preference number: 5 (lower is better)
Translates to: DAEVSGKGFAWKTQR*DKLAELMPAGQDLG
Trigger: GCCAAGATCCTGCCCAGCGGGCATCAACTCGGCCAATTTATCCCACCTTTGAGTCTTCCAGGCGAAACCCTTTCCAGAAACCTCAGCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554148.5
ENST00000557636.5
CDS-3UTR CAA 90 bp AGTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTGAACAGGTTGAAGACCTAAGCAGTTaGGGGGCATGGGGCAAAGGG +
Preference number: 5 (lower is better)
Translates to: SAGGCFTLNHAPRSGEQVEDLSS*GAWGKG
Trigger: CCCTTTGCCCCATGCCCCCAAACTGCTTAGGTCTTC...AACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS TCA 90 bp TGCAGCACTTTGGAAGGAAGAAAAGGGACCAATGGTGTGACTTCCTaGTCGACAGCGTGGCAGGCCAGTAGGGCTTGGGATGTTCTGTGC +
Preference number: 5 (lower is better)
Translates to: CSTLEGRKGTNGVTS*STAWQASRAWDVLC
Trigger: GCACAGAACATCCCAAGCCCTACTGGCCTGCCACGCTGTCGATCAGGAAGTCACACCATTGGTCCCTTTTCTTCCTTCCAAAGTGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS TCA 90 bp CACCTCAGGCAGCCTTGCCAGGAGCCACTGGGTTTCATCCTGGCCTaGCCCAGAAAAATCTTATGGAAGAGAACAAGAGGCCCAAGAGCT +
Preference number: 5 (lower is better)
Translates to: HLRQPCQEPLGFILA*PRKILWKRTRGPRA
Trigger: AGCTCTTGGGCCTCTTGTTCTCTTCCATAAGATTTTTCTGGGTCAGGCCAGGATGAAACCCAGTGGCTCCTGGCAAGGCTGCCTGAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS CCA 90 bp AACGCTGAGGTTTCTGGAAAGGGTTTCGCCTGGAAGACTCAAAGGTaGGATAAATTGGCCGAGTTGATGCCCGCTGGGCAGGATCTTGGC +
Preference number: 5 (lower is better)
Translates to: NAEVSGKGFAWKTQR*DKLAELMPAGQDLG
Trigger: GCCAAGATCCTGCCCAGCGGGCATCAACTCGGCCAATTTATCCCACCTTTGAGTCTTCCAGGCGAAACCCTTTCCAGAAACCTCAGCGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298832.14
ENST00000555422.5
CDS CCA 90 bp CAGAGAGTGGACGGCAACGCTGAGGTTTCTGGAAAGGGTTTCGCCTaGAAGACTCAAAGGTGGGATAAATTGGCCGAGTTGATGCCCGCT +
Preference number: 5 (lower is better)
Translates to: QRVDGNAEVSGKGFA*KTQRWDKLAELMPA
Trigger: AGCGGGCATCAACTCGGCCAATTTATCCCACCTTTGAGTCTTCCAGGCGAAACCCTTTCCAGAAACCTCAGCGTTGCCGTCCACTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298832.14
ENST00000555422.5
CDS CCA 90 bp GTATTGGAAGCTTTCTGGGATGTTGCCCTTCTGAGCACTTGTTCGTaGTTGGGTGGGGGTTTGGGAACCAGGGAGGCGCAAGAACTTGGA +
Preference number: 5 (lower is better)
Translates to: VLEAFWDVALLSTCS*LGGGLGTREAQELG
Trigger: TCCAAGTTCTTGCGCCTCCCTGGTTCCCAAACCCCCACCCAACCACGAACAAGTGCTCAGAAGGGCAACATCCCAGAAAGCTTCCAATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS CCA 90 bp GACAGCACCTCAGGCAGCCTTGCCAGGAGCCACTGGGTTTCATCCTaGCCTGACCCAGAAAAATCTTATGGAAGAGAACAAGAGGCCCAA +
Preference number: 5 (lower is better)
Translates to: DSTSGSLARSHWVSS*PDPEKSYGREQEAQ
Trigger: TTGGGCCTCTTGTTCTCTTCCATAAGATTTTTCTGGGTCAGGCCAGGATGAAACCCAGTGGCTCCTGGCAAGGCTGCCTGAGGTGCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS-3UTR CAA 90 bp AGAGGCGAACGGAACACAGAGCTCCACCAGCGAGGTTTGGTTAGTCTGCTCTCACCCGGGCCATCACGATaGGCATTTCCTTTAGGGTTT +
Preference number: 5 (lower is better)
Translates to: RGERNTELHQRGLVSLLSPGPSR*AFPLGF
Trigger: AAACCCTAAAGGAAATGCCAATCGTGATGGCCCGGG...TGAGAGCAGACTAACCAAACCTCGCTGGTGGAGCTCTGTGTTCCGTTCGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR CAA 90 bp TGCTCCTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAACAACTTTGGCGGATGCCGCTGGGCAGGATCTaGGCACACAAATCCTACAAC +
Preference number: 5 (lower is better)
Translates to: CSSFPLDPPKREEQLWRMPLGRI*AHKSYN
Trigger: GTTGTAGGATTTGTGTGCCAAGATCCTGCCCAGCGG...CATCCGCCAAAGTTGTTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAGGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp GCAGCAGTAAAGGGACAGAGAAGACCTAAGCAGTTTGGGGGCATGGGGCAAAGGCAAAGGTGGGATAAATaGGCCGAGTTGATGCCCGCT +
Preference number: 5 (lower is better)
Translates to: AAVKGQRRPKQFGGMGQRQRWDK*AELMPA
Trigger: AGCGGGCATCAACTCGGCCAATTTATCCCACCTTTG...CCTTTGCCCCATGCCCCCAAACTGCTTAGGTCTTCTCTGTCCCTTTACTGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp GGCAACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCAGCATTGCTGCAGGGCAAATaGAAGCTGATAGCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: GNHLLPLLLEGFGDFEAALLQGK*KLIAAC
Trigger: GCAGGCAGCTATCAGCTTCAATTTGCCCTGCAGCAA...TGCTGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp GTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTGAACAGGTTGTTCTGCTCGAAGGCTTaGGGGACTTTGAGGCAGCAA +
Preference number: 5 (lower is better)
Translates to: VLVDASPSIMHPGVVNRLFCSKA*GTLRQQ
Trigger: TTGCTGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAA...CAACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS TCA 90 bp CCCAGAAAAATCTTATGGAAGAGAACAAGAGGCCCAAGAGCTCTCTaGTCTGCTGTCAACCAGCTGCAGCCGGGAGACTGCCAAAGCGCT +
Preference number: 5 (lower is better)
Translates to: PRKILWKRTRGPRAL*SAVNQLQPGDCQSA
Trigger: AGCGCTTTGGCAGTCTCCCGGCTGCAGCTGGTTGACAGCAGATCAGAGAGCTCTTGGGCCTCTTGTTCTCTTCCATAAGATTTTTCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS CCA 90 bp TCATCTGAGGTTTCTGGAAAGGGTTTCGCCTGGAAGACTCAAAGGTaGGATAAATTGGCCGAGTTGATGCCCGCTGGGCAGGATCTTGGC +
Preference number: 5 (lower is better)
Translates to: SSEVSGKGFAWKTQR*DKLAELMPAGQDLG
Trigger: GCCAAGATCCTGCCCAGCGGGCATCAACTCGGCCAATTTATCCCACCTTTGAGTCTTCCAGGCGAAACCCTTTCCAGAAACCTCAGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554878.1
CDS CCA 90 bp TGTGGCCAAAAGGCTATCACTGTGGTTGCTGGACTTCAAGAGGCCTaGCACAAACGTGACTACCCTGGGTACTCCAAGAAGGCAGCCAAA +
Preference number: 5 (lower is better)
Translates to: CGQKAITVVAGLQEA*HKRDYPGYSKKAAK
Trigger: TTTGGCTGCCTTCTTGGAGTACCCAGGGTAGTCACGTTTGTGCCAGGCCTCTTGAAGTCCAGCAACCACAGTGATAGCCTTTTGGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554878.1
CDS-3UTR CAA 90 bp CCTAGAGGCGAACGGAACACAGAGCTCCACCAGCGAGGTTTGGTTAGTCTGCTCAGGCGCACGTCAAACTaGAAATCATCTATGAGCAGG +
Preference number: 5 (lower is better)
Translates to: PRGERNTELHQRGLVSLLRRTSN*KSSMSR
Trigger: CCTGCTCATAGATGATTTCAAGTTTGACGTGCGCCT...GAGCAGACTAACCAAACCTCGCTGGTGGAGCTCTGTGTTCCGTTCGCCTCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR CAA 90 bp GGCAACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCAGCAAGTGCAGCATGCAGCTaGGCCTTTGAATTCAGACTC +
Preference number: 5 (lower is better)
Translates to: GNHLLPLLLEGFGDFEAASAACS*AFEFRL
Trigger: GAGTCTGAATTCAAAGGCCAAGCTGCATGCTGCACT...TGCTGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp GCAGCAGTAAAGGGACAGAGAAGACCTAAGCAGTTTGGGGGCATGGGGCAAAGGCAGGTTTGTTACCTGTaGGGTGAGGAGGTTGATGTG +
Preference number: 5 (lower is better)
Translates to: AAVKGQRRPKQFGGMGQRQVCYL*GEEVDV
Trigger: CACATCAACCTCCTCACCCAACAGGTAACAAACCTG...CCTTTGCCCCATGCCCCCAAACTGCTTAGGTCTTCTCTGTCCCTTTACTGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp GTCCTGGGTGCTGACACAGAACAGTCGTTACCACCAACTTCCACTCAGGTCACCCAGGTTTGTTACCTGTaGGGTGAGGAGGTTGATGTG +
Preference number: 5 (lower is better)
Translates to: VLGADTEQSLPPTSTQVTQVCYL*GEEVDV
Trigger: CACATCAACCTCCTCACCCAACAGGTAACAAACCTG...GGTGACCTGAGTGGAAGTTGGTGGTAACGACTGTTCTGTGTCAGCACCCAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CAA 90 bp TGCTCCTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAACAACTTTGGCGGATGGGGAGGCGCAAGAACTaGGAGGTGGTACCACTTTTT +
Preference number: 5 (lower is better)
Translates to: CSSFPLDPPKREEQLWRMGRRKN*EVVPLF
Trigger: AAAAAGTGGTACCACCTCCAAGTTCTTGCGCCTCCC...CATCCGCCAAAGTTGTTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAGGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp TTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTGGTTGGGTGGGGGTTaGGGAACCAGGGAGGCGCAA +
Preference number: 5 (lower is better)
Translates to: FSLSFALVPGKLQSPQVSWLGGG*GTREAQ
Trigger: TTGCGCCTCCCTGGTTCCCAAACCCCCACCCAACCA...AGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS TCA 90 bp AGGGTTTCGCCTGGAAGACTCAAAGGTGGGATAAATTGGCCGAGTTaGTGCCCGCTGGGCAGGATCTTGGCACACAAATCCTACAACAGT +
Preference number: 5 (lower is better)
Translates to: RVSPGRLKGGINWPS*CPLGRILAHKSYNS
Trigger: ACTGTTGTAGGATTTGTGTGCCAAGATCCTGCCCAGCGGGCATCAACTCGGCCAATTTATCCCACCTTTGAGTCTTCCAGGCGAAACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298832.14
ENST00000554148.5
ENST00000555422.5
ENST00000557636.5
CDS TCA 90 bp ACTAGGCAGCGCCCTACAGAGCCGTCTGGGAGGGGATTACCAGCCTaGTCCCTTGTCTTTAGAGCCAGAAATGACTCAAACTTCACAAAC +
Preference number: 5 (lower is better)
Translates to: TRQRPTEPSGRGLPA*SLVFRARNDSNFTN
Trigger: GTTTGTGAAGTTTGAGTCATTTCTGGCTCTAAAGACAAGGGATCAGGCTGGTAATCCCCTCCCAGACGGCTCTGTAGGGCGCTGCCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS GCA 90 bp AAAAATCTTATGGAAGAGAACAAGAGGCCCAAGAGCTCTCTGATCTaGTGTCAACCAGCTGCAGCCGGGAGACTGCCAAAGCGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: KNLMEENKRPKSSLI*CQPAAAGRLPKRCS
Trigger: ACTGCAGCGCTTTGGCAGTCTCCCGGCTGCAGCTGGTTGACAGCAGATCAGAGAGCTCTTGGGCCTCTTGTTCTCTTCCATAAGATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS CCA 90 bp ACTGTGCAGATACTGGACGCTGAGGTTTCTGGAAAGGGTTTCGCCTaGAAGACTCAAAGGTGGGATAAATTGGCCGAGTTGATGCCCGCT +
Preference number: 5 (lower is better)
Translates to: TVQILDAEVSGKGFA*KTQRWDKLAELMPA
Trigger: AGCGGGCATCAACTCGGCCAATTTATCCCACCTTTGAGTCTTCCAGGCGAAACCCTTTCCAGAAACCTCAGCGTCCAGTATCTGCACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554148.5
ENST00000557636.5
CDS CCA 90 bp TGGCACAAACGTGACTACCCTGGGTACTCCAAGAAGGCAGCCAAATaGGCCCTGTCCATCACTGATCCCAGAAGAGGATCTTGGCTATTT +
Preference number: 5 (lower is better)
Translates to: WHKRDYPGYSKKAAK*ALSITDPRRGSWLF
Trigger: AAATAGCCAAGATCCTCTTCTGGGATCAGTGATGGACAGGGCCCATTTGGCTGCCTTCTTGGAGTACCCAGGGTAGTCACGTTTGTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554878.1
CDS-3UTR CAA 90 bp GTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTGAACAGGTTGGCATGGATGATCCTCTaGACTTATGACCTCCTCATC +
Preference number: 5 (lower is better)
Translates to: VLVDASPSIMHPGVVNRLAWMIL*TYDLLI
Trigger: GATGAGGAGGTCATAAGTCAAGAGGATCATCCATGC...CAACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp CTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAACAACTTTGGCGGATGATGATGATAAATTGGCCGAGTaGATGCCCGCTGGGCAGGAT +
Preference number: 5 (lower is better)
Translates to: LFPPRSSEKGGTTLADDDDKLAE*MPAGQD
Trigger: ATCCTGCCCAGCGGGCATCAACTCGGCCAATTTATC...ATCATCATCCGCCAAAGTTGTTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp ATGGACCCCTTGAAGTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGTTCAGTAAAATTGTaGGCTGGTGAGGCATGCTGG +
Preference number: 5 (lower is better)
Translates to: MDPLKCWWMLHPQSCTQECSVKL*AGEACW
Trigger: CCAGCATGCCTCACCAGCCAACAATTTTACTGAACA...CTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCACTTCAAGGGGTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp AATACTATGGACCCCTTGAAGTGCTGGTGGATGCTTCACCCTCAATCATGCACCAGCACGATCCTGCCTTaGCTGAAGAGGGACGAGACA +
Preference number: 5 (lower is better)
Translates to: NTMDPLKCWWMLHPQSCTSTILP*LKRDET
Trigger: TGTCTCGTCCCTCTTCAGCAAAGGCAGGATCGTGCT...GGTGCATGATTGAGGGTGAAGCATCCACCAGCACTTCAAGGGGTCCATAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp CCACTGTCCTGGGTGCTGACACAGAACAGTCGTTACCACCAACTTCCACTCAGGGGACTGAAGTTTTTGTaGTTCAAGTTGCTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: PLSWVLTQNSRYHQLPLRGLKFL*FKLLQG
Trigger: GCCCTGCAGCAACTTGAACAACAAAAACTTCAGTCC...CCTGAGTGGAAGTTGGTGGTAACGACTGTTCTGTGTCAGCACCCAGGACAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CAA 90 bp TTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGTGGTTGGGTGGGGGTTaGGGAACCAGGGAGGCGCAA +
Preference number: 5 (lower is better)
Translates to: LCLANFNLLRFLSPYFLEWLGGG*GTREAQ
Trigger: TTGCGCCTCCCTGGTTCCCAAACCCCCACCCAACCA...CTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp GTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGTGCCCTTCTGAGCACTaGTTCGTGGTTGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: VPGKLQSPQVSFSIFPGECPSEH*FVVGWG
Trigger: CCCCCACCCAACCACGAACAAGTGCTCAGAAGGGCA...CTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp TGCTCTGACGGGGTATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCCATCCGCGGAGGACCCTTaGGAAGCTTTCTGGGATGTT +
Preference number: 5 (lower is better)
Translates to: CSDGVYNASAECPHCQVPSAEDP*EAFWDV
Trigger: AACATCCCAGAAAGCTTCCAAAGGGTCCTCCGCGGA...TGGAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATACCCCGTCAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp ATGGACCCCTTGAAGTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGAATACTATGGACCCCTaGAAGTGCTGGTGGATGCTT +
Preference number: 5 (lower is better)
Translates to: MDPLKCWWMLHPQSCTQENTMDP*KCWWML
Trigger: AAGCATCCACCAGCACTTCAAGGGGTCCATAGTATT...CTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCACTTCAAGGGGTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS TCA 90 bp CAACCAGCTCCATCTGTTCATCCTCTTTGGCAGCCCAACTGGCACTaGACGTCTGACCGCCACTGTCTTTCATCAGGCGAATTTGAACAT +
Preference number: 5 (lower is better)
Translates to: QPAPSVHPLWQPNWH*TSDRHCLSSGEFEH
Trigger: ATGTTCAAATTCGCCTGATGAAAGACAGTGGCGGTCAGACGTTCAGTGCCAGTTGGGCTGCCAAAGAGGATGAACAGATGGAGCTGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000555422.5
ENST00000556893.5
ENST00000557636.5
CDS TCA 90 bp ATGGCACAGATTCTTGTAGGTTTTGGACCTATCCAGCCAGATTCCTaGGATCACAGCCCCAAGCATTCCTGCAATGACGATCGTCAGGCC +
Preference number: 5 (lower is better)
Translates to: MAQILVGFGPIQPDS*DHSPKHSCNDDRQA
Trigger: GGCCTGACGATCGTCATTGCAGGAATGCTTGGGGCTGTGATCTCAGGAATCTGGCTGGATAGGTCCAAAACCTACAAGAATCTGTGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556265.5
CDS CCA 90 bp GGTGGGCCAGGATTCTTCTGCGTTCCAGAAGTGCCAATCGTCGACTaGGTAATACCATCCTCAGTGAATGCTGGAGGTTATTTGATGCTC +
Preference number: 5 (lower is better)
Translates to: GGPGFFCVPEVPIVD*VIPSSVNAGGYLML
Trigger: GAGCATCAAATAACCTCCAGCATTCACTGAGGATGGTATTACCCAGTCGACGATTGGCACTTCTGGAACGCAGAAGAATCCTGGCCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000555422.5
ENST00000556893.5
ENST00000557636.5
CDS CCA 90 bp TGGCAAGGCCCTGGAGAGAGGTCAGAGGTTGTAACAGATGACAAATaGGTGTTGGGAATTTTCTGCAGAGTAGCAGTAGGACCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: WQGPGERSEVVTDDK*VLGIFCRVAVGPEE
Trigger: CTCCTCTGGTCCTACTGCTACTCTGCAGAAAATTCCCAACACCCATTTGTCATCTGTTACAACCTCTGACCTCTCTCCAGGGCCTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000555422.5
ENST00000556893.5
ENST00000557636.5
CDS CCA 90 bp GCAGCCAAATGGGCCCTGTCCATCACTGATCCCAGAAGAGGATCTTaGCTATTTCAGCTTCTACATGATGATGAGGGAGGTCATCTGAGG +
Preference number: 5 (lower is better)
Translates to: AAKWALSITDPRRGS*LFQLLHDDEGGHLR
Trigger: CCTCAGATGACCTCCCTCATCATCATGTAGAAGCTGAAATAGCCAAGATCCTCTTCTGGGATCAGTGATGGACAGGGCCCATTTGGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554878.1
CDS-3UTR CAA 90 bp CCACCTAGAGGCGAACGGAACACAGAGCTCCACCAGCGAGGTTTGGTTAGTCTGTATAGTCAGTGCTGCTaGGGTGAACTTCATGAAATC +
Preference number: 5 (lower is better)
Translates to: PPRGERNTELHQRGLVSLYSQCC*GELHEI
Trigger: GATTTCATGAAGTTCACCCAAGCAGCACTGACTATA...CAGACTAACCAAACCTCGCTGGTGGAGCTCTGTGTTCCGTTCGCCTCTAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR CAA 90 bp TTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGTGCCCTTCTGAGCACTaGTTCGTGGTTGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: LCLANFNLLRFLSPYFLECPSEH*FVVGWG
Trigger: CCCCCACCCAACCACGAACAAGTGCTCAGAAGGGCA...CTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTGCCCTTCTGAGCACTaGTTCGTGGTTGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSCPSEH*FVVGWG
Trigger: CCCCCACCCAACCACGAACAAGTGCTCAGAAGGGCA...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp CCACTGTCCTGGGTGCTGACACAGAACAGTCGTTACCACCAACTTCCACTCAGGCAGGTTACAACATCTTaGGCCCCACCCTTTCAAATT +
Preference number: 5 (lower is better)
Translates to: PLSWVLTQNSRYHQLPLRQVTTS*APPFQI
Trigger: AATTTGAAAGGGTGGGGCCAAAGATGTTGTAACCTG...CCTGAGTGGAAGTTGGTGGTAACGACTGTTCTGTGTCAGCACCCAGGACAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS CCA 90 bp CCTCCAGAGACAGGAGCTTCCTCTCGTAAAGTGCAGCATGCAGCTTaGCCTTTGAATTCAGACTCTCTATCTTCAATTCTGGCGCTCCAT +
Preference number: 5 (lower is better)
Translates to: PPETGASSRKVQHAA*PLNSDSLSSILALH
Trigger: ATGGAGCGCCAGAATTGAAGATAGAGAGTCTGAATTCAAAGGCCAAGCTGCATGCTGCACTTTACGAGAGGAAGCTCCTGTCTCTGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000555422.5
ENST00000556893.5
ENST00000556976.1
ENST00000557636.5
CDS-3UTR CAA 90 bp AGGACTTATAAATGCTGTGACTGCCACCTAGAGGCGAACGGAACACAGAGCTCCGCATGGATGATCCTCTaGACTTATGACCTCCTCATC +
Preference number: 5 (lower is better)
Translates to: RTYKCCDCHLEANGTQSSAWMIL*TYDLLI
Trigger: GATGAGGAGGTCATAAGTCAAGAGGATCATCCATGC...GGAGCTCTGTGTTCCGTTCGCCTCTAGGTGGCAGTCACAGCATTTATAAGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR CAA 90 bp AGAACATTCCCAGCATGCCAGAAAAGCCTCCCTCAGACTGCCACACAGACACTAGCATGGATGATCCTCTaGACTTATGACCTCCTCATC +
Preference number: 5 (lower is better)
Translates to: RTFPACQKSLPQTATQTLAWMIL*TYDLLI
Trigger: GATGAGGAGGTCATAAGTCAAGAGGATCATCCATGC...TAGTGTCTGTGTGGCAGTCTGAGGGAGGCTTTTCTGGCATGCTGGGAATGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR CAA 90 bp GTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTGAACAGGTTGTATAGTCAGTGCTGCTaGGGTGAACTTCATGAAATC +
Preference number: 5 (lower is better)
Translates to: VLVDASPSIMHPGVVNRLYSQCC*GELHEI
Trigger: GATTTCATGAAGTTCACCCAAGCAGCACTGACTATA...CAACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp ATGGACCCCTTGAAGTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGATTCGAATAATGTTTTaGTACAGTCGGTCCTTCCGG +
Preference number: 5 (lower is better)
Translates to: MDPLKCWWMLHPQSCTQEIRIMF*YSRSFR
Trigger: CCGGAAGGACCGACTGTACAAAAACATTATTCGAAT...CTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCACTTCAAGGGGTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp GCAGCAGTAAAGGGACAGAGAAGACCTAAGCAGTTTGGGGGCATGGGGCAAAGGACCCTTCGTAAAACTTaGATCTCCTCCATTGACAGA +
Preference number: 5 (lower is better)
Translates to: AAVKGQRRPKQFGGMGQRTLRKT*ISSIDR
Trigger: TCTGTCAATGGAGGAGATCAAAGTTTTACGAAGGGT...CCTTTGCCCCATGCCCCCAAACTGCTTAGGTCTTCTCTGTCCCTTTACTGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp AACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCAGCAAAACCTGGAAGAGGCGTGTaGCCAGCATATAGTTCATTG +
Preference number: 5 (lower is better)
Translates to: NHLLPLLLEGFGDFEAAKPGRGV*PAYSSL
Trigger: CAATGAACTATATGCTGGCAACACGCCTCTTCCAGG...TTTTGCTGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp CTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAACAACTTTGGCGGATGATGATGGTATTTTGGCCTCATaGCCCTCAATCTGCTACTCC +
Preference number: 5 (lower is better)
Translates to: LFPPRSSEKGGTTLADDDGILAS*PSICYS
Trigger: GGAGTAGCAGATTGAGGGCAATGAGGCCAAAATACC...ATCATCATCCGCCAAAGTTGTTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp GAAACTTGTGATGAATGCTCCTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAAATCTGTTCATCCTCTTaGGCAGCCCAACTGGCACTG +
Preference number: 5 (lower is better)
Translates to: ETCDECSSFPLDPPKREEICSSS*AAQLAL
Trigger: CAGTGCCAGTTGGGCTGCCAAAGAGGATGAACAGAT...TTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAGGAGCATTCATCACAAGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp TTCATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTAGCACGATCCTGCCTTaGCTGAAGAGGGACGAGACA +
Preference number: 5 (lower is better)
Translates to: FIQSEFCPCAWQTSISSGSTILP*LKRDET
Trigger: TGTCTCGTCCCTCTTCAGCAAAGGCAGGATCGTGCT...ACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp ACAGTCGTTACCACCAACTTCCACTCAGGTCACCCTGATGAGAATCACCTAAGCGCCTGGCTGTACACGTaGTTTTCTACTTCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: TVVTTNFHSGHPDENHLSAWLYT*FSTSPS
Trigger: GGAAGGAGAAGTAGAAAACAACGTGTACAGCCAGGC...GCTTAGGTGATTCTCATCAGGGTGACCTGAGTGGAAGTTGGTGGTAACGACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CAA 90 bp AACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCAGCAAAAAGGTGGTACCACTTTTaGTGGCAGAGTGGTTGGCTT +
Preference number: 5 (lower is better)
Translates to: NHLLPLLLEGFGDFEAAKRWYHF*WQSGWL
Trigger: AAGCCAACCACTCTGCCACAAAAAGTGGTACCACCT...TTTTGCTGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTGGTTGGGTGGGGGTTaGGGAACCAGGGAGGCGCAA +
Preference number: 5 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSWLGGG*GTREAQ
Trigger: TTGCGCCTCCCTGGTTCCCAAACCCCCACCCAACCA...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp CATACGGCTGACCTCACCACATGTTCAGGTAACATTAATTGGGATTTGGTGCTAAGCACTTGTTCGTGGTaGGGTGGGGGTTTGGGAACC +
Preference number: 5 (lower is better)
Translates to: HTADLTTCSGNINWDLVLSTCSW*GGGLGT
Trigger: GGTTCCCAAACCCCCACCCAACCACGAACAAGTGCT...TAGCACCAAATCCCAATTAATGTTACCTGAACATGTGGTGAGGTCAGCCGTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CAA 90 bp GTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTGAACAGGTTGTTTCTCTTACCCTGGCTCATGTaGTCAATGGCACACCGATTT +
Preference number: 5 (lower is better)
Translates to: VDASPSIMHPGVVNRLFLLPWLM*SMAHRF
Trigger: AAATCGGTGTGCCATTGACAACATGAGCCAGGGTAA...GAGAAACAACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGAAGCATCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp GCTCATGTTCAGATGCCTGGTCCAGCCCTTTATCTAATAACTGCGAGATGTTTCCTCCACCAGCGAGGTTaGGTTAGTCTGCTCTCACTG +
Preference number: 5 (lower is better)
Translates to: AHVQMPGPALYLITARCFLHQRG*VSLLSL
Trigger: CAGTGAGAGCAGACTAACCAAACCTCGCTGGTGGAG...GAAACATCTCGCAGTTATTAGATAAAGGGCTGGACCAGGCATCTGAACATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS GCA 90 bp TCCAGAAGTGCCAATCGTCGACTGGGTAATACCATCCTCAGTGAATaGTGGAGGTTATTTGATGCTCGCTTGAGGAAACGAACAACCAGC +
Preference number: 5 (lower is better)
Translates to: SRSANRRLGNTILSE*WRLFDARLRKRTTS
Trigger: GCTGGTTGTTCGTTTCCTCAAGCGAGCATCAAATAACCTCCAGCATTCACTGAGGATGGTATTACCCAGTCGACGATTGGCACTTCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000555422.5
ENST00000556893.5
ENST00000557636.5
CDS GCA 90 bp TCATTCTTTGAACTGGGGCTCTCTTTGGAGGCAGAAGAGAGAATGTaGCAAGCCCAACACCTTCCCTGTCATCTATCCAGTTGCAGAAGA +
Preference number: 5 (lower is better)
Translates to: SFFELGLSLEAEERM*QAQHLPCHLSSCRR
Trigger: TCTTCTGCAACTGGATAGATGACAGGGAAGGTGTTGGGCTTGGCACATTCTCTCTTCTGCCTCCAAAGAGAGCCCCAGTTCAAAGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557219.1
CDS GCA 90 bp AGACACAAGAACTTAGGCACATTGAAATTACTGCACGGAACAATGTaGCCTCGCAGGACTCCCGCAAACAGTGCATCATATTGCCATGCG +
Preference number: 5 (lower is better)
Translates to: RHKNLGTLKLLHGTM*PRRTPANSASYCHA
Trigger: CGCATGGCAATATGATGCACTGTTTGCGGGAGTCCTGCGAGGGCACATTGTTCCGTGCAGTAATTTCAATGTGCCTAAGTTCTTGTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS CCA 90 bp AGAAGTGCCAATCGTCGACTGGGTAATACCATCCTCAGTGAATGCTaGAGGTTATTTGATGCTCGCTTGAGGAAACGAACAACCAGCTCC +
Preference number: 5 (lower is better)
Translates to: RSANRRLGNTILSEC*RLFDARLRKRTTSS
Trigger: GGAGCTGGTTGTTCGTTTCCTCAAGCGAGCATCAAATAACCTCCAGCATTCACTGAGGATGGTATTACCCAGTCGACGATTGGCACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000555422.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp ACTTGTGATGAATGCTCCTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAACAAGGGCCATCAATGCGGTaGTATCTCTGCCTTCTTGTT +
Preference number: 5 (lower is better)
Translates to: TCDECSSFPLDPPKREEQGPSMR*YLCLLV
Trigger: AACAAGAAGGCAGAGATACAACCGCATTGATGGCCC...TTGTTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAGGAGCATTCATCACAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCGATAAATTGGCCGAGTaGATGCCCGCTGGGCAGGAT +
Preference number: 5 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSDKLAE*MPAGQD
Trigger: ATCCTGCCCAGCGGGCATCAACTCGGCCAATTTATC...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CAA 90 bp GTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTGAACAGGTTGATTCATTTCAGCTGGTaGGGTAATCACTGGGTATTT +
Preference number: 5 (lower is better)
Translates to: VLVDASPSIMHPGVVNRLIHFSW*GNHWVF
Trigger: AAATACCCAGTGATTACCCAACCAGCTGAAATGAAT...CAACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp GTCCTGGGTGCTGACACAGAACAGTCGTTACCACCAACTTCCACTCAGGTCACCATTCATTTCAGCTGGTaGGGTAATCACTGGGTATTT +
Preference number: 5 (lower is better)
Translates to: VLGADTEQSLPPTSTQVTIHFSW*GNHWVF
Trigger: AAATACCCAGTGATTACCCAACCAGCTGAAATGAAT...GGTGACCTGAGTGGAAGTTGGTGGTAACGACTGTTCTGTGTCAGCACCCAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CAA 90 bp TTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTATCTGTTCATCCTCTTaGGCAGCCCAACTGGCACTG +
Preference number: 5 (lower is better)
Translates to: FSLSFALVPGKLQSPQVSICSSS*AAQLAL
Trigger: CAGTGCCAGTTGGGCTGCCAAAGAGGATGAACAGAT...AGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp GTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGATCTGTTCATCCTCTTaGGCAGCCCAACTGGCACTG +
Preference number: 5 (lower is better)
Translates to: VPGKLQSPQVSFSIFPGEICSSS*AAQLAL
Trigger: CAGTGCCAGTTGGGCTGCCAAAGAGGATGAACAGAT...CTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp GTGCTGGTGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTGAACAGGTTGAATTTCTGTCGTCTGTaGCTGTTTAGGTGGCTTTAT +
Preference number: 5 (lower is better)
Translates to: VLVDASPSIMHPGVVNRLNFCRL*LFRWLY
Trigger: ATAAAGCCACCTAAACAGCAACAGACGACAGAAATT...CAACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGAAGCATCCACCAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp CATACGGCTGACCTCACCACATGTTCAGGTAACATTAATTGGGATTTGGTGCTAAGCACGATCCTGCCTTaGCTGAAGAGGGACGAGACA +
Preference number: 5 (lower is better)
Translates to: HTADLTTCSGNINWDLVLSTILP*LKRDET
Trigger: TGTCTCGTCCCTCTTCAGCAAAGGCAGGATCGTGCT...TAGCACCAAATCCCAATTAATGTTACCTGAACATGTGGTGAGGTCAGCCGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CAA 90 bp TTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTGCTGCAGGGCAAATaGAAGCTGATAGCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: FSLSFALVPGKLQSPQVSLLQGK*KLIAAC
Trigger: GCAGGCAGCTATCAGCTTCAATTTGCCCTGCAGCAA...AGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp GCAGCAGTAAAGGGACAGAGAAGACCTAAGCAGTTTGGGGGCATGGGGCAAAGGTTTTTGTTGTTCAAGTaGCTGCAGGGCAAATTGAAG +
Preference number: 5 (lower is better)
Translates to: AAVKGQRRPKQFGGMGQRFLLFK*LQGKLK
Trigger: CTTCAATTTGCCCTGCAGCAACTTGAACAACAAAAA...CCTTTGCCCCATGCCCCCAAACTGCTTAGGTCTTCTCTGTCCCTTTACTGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp GTCCTGGGTGCTGACACAGAACAGTCGTTACCACCAACTTCCACTCAGGTCACCTTTTTGTTGTTCAAGTaGCTGCAGGGCAAATTGAAG +
Preference number: 5 (lower is better)
Translates to: VLGADTEQSLPPTSTQVTFLLFK*LQGKLK
Trigger: CTTCAATTTGCCCTGCAGCAACTTGAACAACAAAAA...GGTGACCTGAGTGGAAGTTGGTGGTAACGACTGTTCTGTGTCAGCACCCAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CAA 90 bp CTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAACAACTTTGGCGGATGATGATGGACTGAAGTTTTTGTaGTTCAAGTTGCTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: LFPPRSSEKGGTTLADDDGLKFL*FKLLQG
Trigger: GCCCTGCAGCAACTTGAACAACAAAAACTTCAGTCC...ATCATCATCCGCCAAAGTTGTTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp AACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCAGCAAAACCGGGACTGAAGTTTTaGTTGTTCAAGTTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: NHLLPLLLEGFGDFEAAKPGLKF*LFKLLQ
Trigger: CTGCAGCAACTTGAACAACAAAAACTTCAGTCCCGG...TTTTGCTGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp ACAGTCGTTACCACCAACTTCCACTCAGGTCACCCTGATGAGAATCACCTAAGCCCGGGACTGAAGTTTTaGTTGTTCAAGTTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: TVVTTNFHSGHPDENHLSPGLKF*LFKLLQ
Trigger: CTGCAGCAACTTGAACAACAAAAACTTCAGTCCCGG...GCTTAGGTGATTCTCATCAGGGTGACCTGAGTGGAAGTTGGTGGTAACGACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CAA 90 bp GCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGGAGGCGCAAGAACTaGGAGGTGGTACCACTTTTT +
Preference number: 5 (lower is better)
Translates to: ALVPGKLQSPQVSFSIFPGRRKN*EVVPLF
Trigger: AAAAAGTGGTACCACCTCCAAGTTCTTGCGCCTCCC...AGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAAGCACTTGTTCGTGGTaGGGTGGGGGTTTGGGAACC +
Preference number: 5 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSSTCSW*GGGLGT
Trigger: GGTTCCCAAACCCCCACCCAACCACGAACAAGTGCT...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp ATGCCTGGTCCAGCCCTTTATCTAATAACTGCGAGATGTTTCAGTTCTTCCCTTTTGCCCAAACTGGTCTaGAACTCCTGGCCTCAGGCA +
Preference number: 5 (lower is better)
Translates to: MPGPALYLITARCFSSSLLPKLV*NSWPQA
Trigger: TGCCTGAGGCCAGGAGTTCAAGACCAGTTTGGGCAA...AAGGGAAGAACTGAAACATCTCGCAGTTATTAGATAAAGGGCTGGACCAGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR CAA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCACGATCCTGCTGCCTTaGCTGAAGAGGGACGAGACA +
Preference number: 5 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSTILLP*LKRDET
Trigger: TGTCTCGTCCCTCTTCAGCAAAGGCAGCAGGATCGT...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CAA 90 bp GTCCTGGGTGCTGACACAGAACAGTCGTTACCACCAACTTCCACTCAGGTCACCATACCACAAATAGTTTaGAAAGGAGGATCTGAAGCG +
Preference number: 5 (lower is better)
Translates to: VLGADTEQSLPPTSTQVTIPQIV*KGGSEA
Trigger: CGCTTCAGATCCTCCTTTCAAAACTATTTGTGGTAT...GGTGACCTGAGTGGAAGTTGGTGGTAACGACTGTTCTGTGTCAGCACCCAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS TCA 90 bp CTGGATGGAGAATACTGTCTCGCTGCCTGCTTCTCAGCTAGCCGCTaGAGTTCAGCTGTAACCATACTTTGGTTGTACCGTTTGCTATAT +
Preference number: 5 (lower is better)
Translates to: LDGEYCLAACFSASR*SSAVTILWLYRLLY
Trigger: ATATAGCAAACGGTACAACCAAAGTATGGTTACAGCTGAACTTCAGCGGCTAGCTGAGAAGCAGGCAGCGAGACAGTATTCTCCATCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS CCA 90 bp TGTTCTGTTTCCTTGTTGTATACAATGATAAAGTCACCCAGCTGGTaGGCCAGGATTCTTCTGCGTTCCAGAAGTGCCAATCGTCGACTG +
Preference number: 5 (lower is better)
Translates to: CSVSLLYTMIKSPSW*ARILLRSRSANRRL
Trigger: CAGTCGACGATTGGCACTTCTGGAACGCAGAAGAATCCTGGCCCACCAGCTGGGTGACTTTATCATTGTATACAACAAGGAAACAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS CCA 90 bp CTACAAATGTACCAAGAAAAGAGAAGGCCAGCCTCGACCTCGCTGTaGCACATGAGTTATCCTTCAACAGGTGTAGGCATTTTGAGTCAG +
Preference number: 5 (lower is better)
Translates to: LQMYQEKRRPASTSL*HMSYPSTGVGILSQ
Trigger: CTGACTCAAAATGCCTACACCTGTTGAAGGATAACTCATGTGCCACAGCGAGGTCGAGGCTGGCCTTCTCTTTTCTTGGTACATTTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS-3UTR CAA 90 bp CTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAACAACTTTGGCGGATGATGATACTGGATCAAGCAATTaGGATGGCACAGATTCCTGT +
Preference number: 5 (lower is better)
Translates to: LFPPRSSEKGGTTLADDDTGSSN*DGTDSC
Trigger: ACAGGAATCTGTGCCATCCAAATTGCTTGATCCAGT...ATCATCATCCGCCAAAGTTGTTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp AAGTCTGCATTGGCTGATTGGCAACCATCTACTGCCACTTCTGCTCGAAGGCTTAATGTTCTTGGCTCCTaGATCATATCGCACAGTTGC +
Preference number: 5 (lower is better)
Translates to: KSALADWQPSTATSARRLNVLGS*IISHSC
Trigger: GCAACTGTGCGATATGATCAAGGAGCCAAGAACATT...AAGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCCAATCAGCCAATGCAGACTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp ATTGGCAACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCATGTATCTCTGCCTTCTaGTTTCAGGTACCTAAGCAT +
Preference number: 5 (lower is better)
Translates to: IGNHLLPLLLEGFGDFEACISAF*FQVPKH
Trigger: ATGCTTAGGTACCTGAAACAAGAAGGCAGAGATACA...TGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCACCGCTGGGCAGGATCTaGGCACACAAATCCTACAAC +
Preference number: 5 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSPLGRI*AHKSYN
Trigger: GTTGTAGGATTTGTGTGCCAAGATCCTGCCCAGCGG...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CAA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCCAAAGGTGGGATAAATaGGCCGAGTTGATGCCCGCT +
Preference number: 5 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSQRWDK*AELMPA
Trigger: AGCGGGCATCAACTCGGCCAATTTATCCCACCTTTG...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CAA 90 bp GCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTCCTGGAAGAGGCGTGTaGCCAGCATATAGTTCATTG +
Preference number: 5 (lower is better)
Translates to: ALVPGKLQSPQVSFSIFPPGRGV*PAYSSL
Trigger: CAATGAACTATATGCTGGCAACACGCCTCTTCCAGG...AGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp ATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCAGTGCAGCATGCAGCTaGGCCTTTGAATTCAGACTC +
Preference number: 5 (lower is better)
Translates to: IQSEFCPCAWQTSISSGFSAACS*AFEFRL
Trigger: GAGTCTGAATTCAAAGGCCAAGCTGCATGCTGCACT...GAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp GCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTAGTGCAGCATGCAGCTaGGCCTTTGAATTCAGACTC +
Preference number: 5 (lower is better)
Translates to: ALVPGKLQSPQVSFSIFPSAACS*AFEFRL
Trigger: GAGTCTGAATTCAAAGGCCAAGCTGCATGCTGCACT...AGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp AAGTCTGCATTGGCTGATTGGCAACCATCTACTGCCACTTCTGCTCGAAGGCTTTTTCATCAGGCGAATTaGAACATGCTGGAGATAGGC +
Preference number: 5 (lower is better)
Translates to: KSALADWQPSTATSARRLFHQAN*NMLEIG
Trigger: GCCTATCTCCAGCATGTTCAAATTCGCCTGATGAAA...AAGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCCAATCAGCCAATGCAGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp TGCTCTGACGGGGTATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCCATTATTTGATGCTCGCTaGAGGAAACGAACAACCAGC +
Preference number: 5 (lower is better)
Translates to: CSDGVYNASAECPHCQVPLFDAR*RKRTTS
Trigger: GCTGGTTGTTCGTTTCCTCAAGCGAGCATCAAATAA...TGGAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATACCCCGTCAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp TGTGCTCTGACGGGGTATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCCAGGGTGATCACCTTTaGCCCCACTATCAGAATAAT +
Preference number: 5 (lower is better)
Translates to: CALTGYIMHQLNVPTAKFQGDHL*PHYQNN
Trigger: ATTATTCTGATAGTGGGGCAAAAGGTGATCACCCTG...GAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATACCCCGTCAGAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp TGCTCCTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAACAACTTTGGCGGATGAGCTGTAACCATACTTaGGTTGTACCGTTTGCTATA +
Preference number: 5 (lower is better)
Translates to: CSSFPLDPPKREEQLWRMSCNHT*VVPFAI
Trigger: TATAGCAAACGGTACAACCAAAGTATGGTTACAGCT...CATCCGCCAAAGTTGTTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAGGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp TTCATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTCAGGTTTGTTACCTGTaGGGTGAGGAGGTTGATGTG +
Preference number: 5 (lower is better)
Translates to: FIQSEFCPCAWQTSISSGQVCYL*GEEVDV
Trigger: CACATCAACCTCCTCACCCAACAGGTAACAAACCTG...ACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp TCATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTGCCTGGCTGTACACGTaGTTTTCTACTTCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: SFSLSFALVPGKLQSPQVAWLYT*FSTSPS
Trigger: GGAAGGAGAAGTAGAAAACAACGTGTACAGCCAGGC...AACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTTGCTGCAGGGCAAATaGAAGCTGATAGCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSLLQGK*KLIAAC
Trigger: GCAGGCAGCTATCAGCTTCAATTTGCCCTGCAGCAA...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp TTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTAGGTGGTACCACTTTTaGTGGCAGAGTGGTTGGCTT +
Preference number: 5 (lower is better)
Translates to: FSLSFALVPGKLQSPQVSRWYHF*WQSGWL
Trigger: AAGCCAACCACTCTGCCACAAAAAGTGGTACCACCT...AGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp AACCATCTACTGCCACTTCTGCTCGAAGGCTTTGGGGACTTTGAGGCAGCAAAAAAGGGAGGAACAACTTaGGCGGATGATGATGTTGAA +
Preference number: 5 (lower is better)
Translates to: NHLLPLLLEGFGDFEAAKKGGTT*ADDDVE
Trigger: TTCAACATCATCATCCGCCAAAGTTGTTCCTCCCTT...TTTTGCTGCCTCAAAGTCCCCAAAGCCTTCGAGCAGAAGTGGCAGTAGATGGTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp ATTTGCAGAGTGCTGTTCCGTACCAGAAAAATTTCTTCTTCTGGCCGGGCGTGGACACAACAGTTTGATTaGCAGAGTGCTGTTCCGTAC +
Preference number: 5 (lower is better)
Translates to: ICRVLFRTRKISSSGRAWTQQFD*QSAVPY
Trigger: GTACGGAACAGCACTCTGCAAATCAAACTGTTGTGT...CCACGCCCGGCCAGAAGAAGAAATTTTTCTGGTACGGAACAGCACTCTGCAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS TCA 90 bp GTAATACCATCCTCAGTGAATGCTGGAGGTTATTTGATGCTCGCTTaGGGAAACGAACAACCAGCTCCATCTGTTCATCCTCTTTGGCAG +
Preference number: 5 (lower is better)
Translates to: VIPSSVNAGGYLMLA*GNEQPAPSVHPLWQ
Trigger: CTGCCAAAGAGGATGAACAGATGGAGCTGGTTGTTCGTTTCCTCAAGCGAGCATCAAATAACCTCCAGCATTCACTGAGGATGGTATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000555422.5
ENST00000556893.5
ENST00000557636.5
CDS CCA 90 bp CGCATCACAGGCCAAAGAAGGAGAGAGATTCACTTCCAACAACCATaGCTTCAGAGTAGAATCTATGAGCACGTCAAAGCCATAGAGTTC +
Preference number: 5 (lower is better)
Translates to: RITGQRRREIHFQQP*LQSRIYEHVKAIEF
Trigger: GAACTCTATGGCTTTGACGTGCTCATAGATTCTACTCTGAAGCCATGGTTGTTGGAAGTGAATCTCTCTCCTTCTTTGGCCTGTGATGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298832.14
ENST00000554148.5
ENST00000554935.5
ENST00000557636.5
CDS-3UTR CAA 90 bp AACACAGAGCTCCACCAGCGAGGTTTGGTTAGTCTGCTCTCACTGATTTCAAGTACTGGATCAAGCAATTaGGATGGCACAGATTCCTGT +
Preference number: 5 (lower is better)
Translates to: NTELHQRGLVSLLSLISSTGSSN*DGTDSC
Trigger: ACAGGAATCTGTGCCATCCAAATTGCTTGATCCAGT...ACTTGAAATCAGTGAGAGCAGACTAACCAAACCTCGCTGGTGGAGCTCTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR CAA 90 bp ATTTGCAGAGTGCTGTTCCGTACCAGAAAAATTTCTTCTTCTGGCCGGGCGTGGTATAGTCAGTGCTGCTaGGGTGAACTTCATGAAATC +
Preference number: 5 (lower is better)
Translates to: ICRVLFRTRKISSSGRAWYSQCC*GELHEI
Trigger: GATTTCATGAAGTTCACCCAAGCAGCACTGACTATA...CCACGCCCGGCCAGAAGAAGAAATTTTTCTGGTACGGAACAGCACTCTGCAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR CAA 90 bp CTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAACAACTTTGGCGGATGATGATAAAGTGATTAACTTTTaGTGCTTCAGAGAGGGTGCG +
Preference number: 5 (lower is better)
Translates to: LFPPRSSEKGGTTLADDDKVINF*CFREGA
Trigger: CGCACCCTCTCTGAAGCACAAAAAGTTAATCACTTT...ATCATCATCCGCCAAAGTTGTTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp GCCTCCCTCAGACTGCCACACAGACACTATCCCCCAGTCACTCTTGTTTTTAATAAAGTGATTAACTTTTaGTGCTTCAGAGAGGGTGCG +
Preference number: 5 (lower is better)
Translates to: ASLRLPHRHYPPVTLVFNKVINF*CFREGA
Trigger: CGCACCCTCTCTGAAGCACAAAAAGTTAATCACTTT...ATTAAAAACAAGAGTGACTGGGGGATAGTGTCTGTGTGGCAGTCTGAGGGAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR CAA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCAGTGCAGCATGCAGCTaGGCCTTTGAATTCAGACTC +
Preference number: 5 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSSAACS*AFEFRL
Trigger: GAGTCTGAATTCAAAGGCCAAGCTGCATGCTGCACT...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCGGTATTTTGGCCTCATaGCCCTCAATCTGCTACTCC +
Preference number: 5 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSGILAS*PSICYS
Trigger: GGAGTAGCAGATTGAGGGCAATGAGGCCAAAATACC...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp CATACGGCTGACCTCACCACATGTTCAGGTAACATTAATTGGGATTTGGTGCTAGGTATTTTGGCCTCATaGCCCTCAATCTGCTACTCC +
Preference number: 5 (lower is better)
Translates to: HTADLTTCSGNINWDLVLGILAS*PSICYS
Trigger: GGAGTAGCAGATTGAGGGCAATGAGGCCAAAATACC...TAGCACCAAATCCCAATTAATGTTACCTGAACATGTGGTGAGGTCAGCCGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CAA 90 bp CTCTTTCCCCCTAGATCCTCCGAAAAGGGAGGAACAACTTTGGCGGATGATGATATTCGGGCCTGCATTTaGCTAAGATTGCCATTATCT +
Preference number: 5 (lower is better)
Translates to: LFPPRSSEKGGTTLADDDIRACI*LRLPLS
Trigger: AGATAATGGCAATCTTAGCAAAATGCAGGCCCGAAT...ATCATCATCCGCCAAAGTTGTTCCTCCCTTTTCGGAGGATCTAGGGGGAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp TCATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTGTTCAGTAAAATTGTaGGCTGGTGAGGCATGCTGG +
Preference number: 5 (lower is better)
Translates to: SFSLSFALVPGKLQSPQVCSVKL*AGEACW
Trigger: CCAGCATGCCTCACCAGCCAACAATTTTACTGAACA...AACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp ATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCCTGTGTTCAGTAAAATaGTTGGCTGGTGAGGCATGC +
Preference number: 5 (lower is better)
Translates to: IQSEFCPCAWQTSISSGFLCSVK*LAGEAC
Trigger: GCATGCCTCACCAGCCAACAATTTTACTGAACACAG...GAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp TTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGGTGGTACCACTTTTaGTGGCAGAGTGGTTGGCTT +
Preference number: 5 (lower is better)
Translates to: LCLANFNLLRFLSPYFLERWYHF*WQSGWL
Trigger: AAGCCAACCACTCTGCCACAAAAAGTGGTACCACCT...CTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp TTCATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTGATCTGAAGCGGGTATaGGAAGCTTTCTGGGATGTT +
Preference number: 5 (lower is better)
Translates to: FIQSEFCPCAWQTSISSGDLKRV*EAFWDV
Trigger: AACATCCCAGAAAGCTTCCAATACCCGCTTCAGATC...ACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp ATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTCAATAAGCTTCTTCTaGGGTTTCCCCTGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: IQSEFCPCAWQTSISSGFSISFF*GFPCPG
Trigger: TCCAGGACAGGGGAAACCCAAGAAGAAGCTTATTGA...GAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS GCA 90 bp TGCTGCTTGGGTGAACTTCATGAAATCCATGGGCTGTCAGAATGCTaGGTACTAGGCGACTGTCCGTTCGTACAATCTTATAAGACAAAT +
Preference number: 5 (lower is better)
Translates to: CCLGELHEIHGLSEC*VLGDCPFVQSYKTN
Trigger: ATTTGTCTTATAAGATTGTACGAACGGACAGTCGCCTAGTACGCAGCATTCTGACAGCCCATGGATTTCATGAAGTTCACCCAAGCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286650.9
ENST00000298832.14
ENST00000555290.5
ENST00000556173.5
ENST00000556977.5
ENST00000557636.5
CDS CCA 90 bp ATTTGTTCTGTTTCCTTGTTGTATACAATGATAAAGTCACCCAGCTaGTGGGCCAGGATTCTTCTGCGTTCCAGAAGTGCCAATCGTCGA +
Preference number: 5 (lower is better)
Translates to: ICSVSLLYTMIKSPS*WARILLRSRSANRR
Trigger: TCGACGATTGGCACTTCTGGAACGCAGAAGAATCCTGGCCCACCAGCTGGGTGACTTTATCATTGTATACAACAAGGAAACAGAACAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS CCA 90 bp CGCATCACAGGCCAAAGAAGGAGAGAGATTCACTTCCAACAACCATaGCTTCAGAGTAGAATCTATGAGCACGTCAAAGCCATAGAGTTT +
Preference number: 5 (lower is better)
Translates to: RITGQRRREIHFQQP*LQSRIYEHVKAIEF
Trigger: AAACTCTATGGCTTTGACGTGCTCATAGATTCTACTCTGAAGCCATGGTTGTTGGAAGTGAATCTCTCTCCTTCTTTGGCCTGTGATGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555422.5
CDS-3UTR CAA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCACCTGGAAGAGGCGTGTaGCCAGCATATAGTTCATTG +
Preference number: 5 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSPGRGV*PAYSSL
Trigger: CAATGAACTATATGCTGGCAACACGCCTCTTCCAGG...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp ATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCCATGCAGCTTGGCCTTaGAATTCAGACTCTCTATCT +
Preference number: 5 (lower is better)
Translates to: IQSEFCPCAWQTSISSGFHAAWP*NSDSLS
Trigger: AGATAGAGAGTCTGAATTCAAAGGCCAAGCTGCATG...GAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp GTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGCATGCAGCTTGGCCTTaGAATTCAGACTCTCTATCT +
Preference number: 5 (lower is better)
Translates to: VPGKLQSPQVSFSIFPGEHAAWP*NSDSLS
Trigger: AGATAGAGAGTCTGAATTCAAAGGCCAAGCTGCATG...CTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp GCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTTTTCATCAGGCGAATTaGAACATGCTGGAGATAGGC +
Preference number: 5 (lower is better)
Translates to: ALVPGKLQSPQVSFSIFPFHQAN*NMLEIG
Trigger: GCCTATCTCCAGCATGTTCAAATTCGCCTGATGAAA...AGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGATCTGTTCATCCTCTTaGGCAGCCCAACTGGCACTG +
Preference number: 5 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSICSSS*AAQLAL
Trigger: CAGTGCCAGTTGGGCTGCCAAAGAGGATGAACAGAT...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp TCATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTTATTTGATGCTCGCTaGAGGAAACGAACAACCAGC +
Preference number: 5 (lower is better)
Translates to: SFSLSFALVPGKLQSPQVLFDAR*RKRTTS
Trigger: GCTGGTTGTTCGTTTCCTCAAGCGAGCATCAAATAA...AACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp ATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTCAGCCTCACTTGCTaGTCTGATGAACTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: IQSEFCPCAWQTSISSGFFSLTC*SDELLK
Trigger: TTTCAGGAGTTCATCAGACAAGCAAGTGAGGCTGAA...GAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp TGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGTTGTTCAGTAAAATTGTaGGCTGGTGAGGCATGCTGG +
Preference number: 5 (lower is better)
Translates to: CLANFNLLRFLSPYFLESCSVKL*AGEACW
Trigger: CCAGCATGCCTCACCAGCCAACAATTTTACTGAACA...ACTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp GGGCAAAGGGAAGGTAAAAGATACAAGTGTGCTCTGACGGGGTATATAATGCATCTGTGTTCAGTAAAATaGTTGGCTGGTGAGGCATGC +
Preference number: 5 (lower is better)
Translates to: GQREGKRYKCALTGYIMHLCSVK*LAGEAC
Trigger: GCATGCCTCACCAGCCAACAATTTTACTGAACACAG...ATGCATTATATACCCCGTCAGAGCACACTTGTATCTTTTACCTTCCCTTTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCCTGTGTTCAGTAAAATaGTTGGCTGGTGAGGCATGC +
Preference number: 5 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSLCSVK*LAGEAC
Trigger: GCATGCCTCACCAGCCAACAATTTTACTGAACACAG...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp TATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCCATCAAAACCCAGAAGCCTGGCTGTACACGTaGTTTTCTACTTCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: YIMHQLNVPTAKFHQNPEAWLYT*FSTSPS
Trigger: GGAAGGAGAAGTAGAAAACAACGTGTACAGCCAGGC...TTCTGGGTTTTGATGGAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAGCCTGGCTGTACACGTaGTTTTCTACTTCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSAWLYT*FSTSPS
Trigger: GGAAGGAGAAGTAGAAAACAACGTGTACAGCCAGGC...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp TGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGTGGACTGAAGTTTTTGTaGTTCAAGTTGCTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: CLANFNLLRFLSPYFLESGLKFL*FKLLQG
Trigger: GCCCTGCAGCAACTTGAACAACAAAAACTTCAGTCC...ACTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp AAGTCTGCATTGGCTGATTGGCAACCATCTACTGCCACTTCTGCTCGAAGGCTTTTCATTGTCCATAAATaGGAGTTAGGTAGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: KSALADWQPSTATSARRLFIVHK*ELGSVW
Trigger: CCAGACACTACCTAACTCCAATTTATGGACAATGAA...AAGCCTTCGAGCAGAAGTGGCAGTAGATGGTTGCCAATCAGCCAATGCAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGGGGAGGCGCAAGAACTaGGAGGTGGTACCACTTTTT +
Preference number: 5 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSGRRKN*EVVPLF
Trigger: AAAAAGTGGTACCACCTCCAAGTTCTTGCGCCTCCC...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp GGGCAAAGGGAAGGTAAAAGATACAAGTGTGCTCTGACGGGGTATATAATGCATCAATGGCACACCGATTaGTCTCCTCTCTCTAGGAAA +
Preference number: 5 (lower is better)
Translates to: GQREGKRYKCALTGYIMHQWHTD*SPLSRK
Trigger: TTTCCTAGAGAGAGGAGACAAATCGGTGTGCCATTG...ATGCATTATATACCCCGTCAGAGCACACTTGTATCTTTTACCTTCCCTTTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGAACGCTGCTTGGCCTTaGACGACTGAAACTGTGCAG +
Preference number: 5 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSNAAWP*TTETVQ
Trigger: CTGCACAGTTTCAGTCGTCAAAGGCCAAGCAGCGTT...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CAA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCGATCTGAAGCGGGTATaGGAAGCTTTCTGGGATGTT +
Preference number: 5 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSDLKRV*EAFWDV
Trigger: AACATCCCAGAAAGCTTCCAATACCCGCTTCAGATC...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp TTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGTCAATAAGCTTCTTCTaGGGTTTCCCCTGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: LCLANFNLLRFLSPYFLESISFF*GFPCPG
Trigger: TCCAGGACAGGGGAAACCCAAGAAGAAGCTTATTGA...CTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS TCA 90 bp GGTGTATTTTCTACCAAAGCTGTCAATGAGGGTGTATATTTGGCTTaGTTTTCTCTAAGAAATCCTGCAGACTCCTCCTGGGAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: GVFSTKAVNEGVYLA*FSLRNPADSSWEAS
Trigger: GGAGGCTTCCCAGGAGGAGTCTGCAGGATTTCTTAGAGAAAATCAAGCCAAATATACACCCTCATTGACAGCTTTGGTAGAAAATACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000555422.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCACTGGATCAAGCAATTaGGATGGCACAGATTCCTGT +
Preference number: 5 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSTGSSN*DGTDSC
Trigger: ACAGGAATCTGTGCCATCCAAATTGCTTGATCCAGT...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CAA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAGCATGGATGATCCTCTaGACTTATGACCTCCTCATC +
Preference number: 5 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSAWMIL*TYDLLI
Trigger: GATGAGGAGGTCATAAGTCAAGAGGATCATCCATGC...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CAA 90 bp TATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCCATCAAAACCCAGAAAGGCGCACGTCAAACTaGAAATCATCTATGAGCAGG +
Preference number: 5 (lower is better)
Translates to: YIMHQLNVPTAKFHQNPERRTSN*KSSMSR
Trigger: CCTGCTCATAGATGATTTCAAGTTTGACGTGCGCCT...TTCTGGGTTTTGATGGAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGGGGCCATCAATGCGGTaGTATCTCTGCCTTCTTGTT +
Preference number: 5 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSGPSMR*YLCLLV
Trigger: AACAAGAAGGCAGAGATACAACCGCATTGATGGCCC...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CAA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGCCTGGAAGAGGCGTGTaGCCAGCATATAGTTCATTG +
Preference number: 5 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSPGRGV*PAYSSL
Trigger: CAATGAACTATATGCTGGCAACACGCCTCTTCCAGG...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGGGTATTTTGGCCTCATaGCCCTCAATCTGCTACTCC +
Preference number: 5 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSGILAS*PSICYS
Trigger: GGAGTAGCAGATTGAGGGCAATGAGGCCAAAATACC...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp TTCATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTATTCGGGCCTGCATTTaGCTAAGATTGCCATTATCT +
Preference number: 5 (lower is better)
Translates to: FIQSEFCPCAWQTSISSGIRACI*LRLPLS
Trigger: AGATAATGGCAATCTTAGCAAAATGCAGGCCCGAAT...ACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp TGTTCAGGTAACATTAATTGGGATTTGGTGCTACCAGGCTACCCAGTCCTGATGATTCGGGCCTGCATTTaGCTAAGATTGCCATTATCT +
Preference number: 5 (lower is better)
Translates to: CSGNINWDLVLPGYPVLMIRACI*LRLPLS
Trigger: AGATAATGGCAATCTTAGCAAAATGCAGGCCCGAAT...CATCAGGACTGGGTAGCCTGGTAGCACCAAATCCCAATTAATGTTACCTGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS-3UTR CAA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTTTCATCAGGCGAATTaGAACATGCTGGAGATAGGC +
Preference number: 5 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSFHQAN*NMLEIG
Trigger: GCCTATCTCCAGCATGTTCAAATTCGCCTGATGAAA...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp GGGCAAAGGGAAGGTAAAAGATACAAGTGTGCTCTGACGGGGTATATAATGCATTTCAGCCTCACTTGCTaGTCTGATGAACTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: GQREGKRYKCALTGYIMHFSLTC*SDELLK
Trigger: TTTCAGGAGTTCATCAGACAAGCAAGTGAGGCTGAA...ATGCATTATATACCCCGTCAGAGCACACTTGTATCTTTTACCTTCCCTTTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp TGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGTTTCAGCCTCACTTGCTaGTCTGATGAACTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: CLANFNLLRFLSPYFLESFSLTC*SDELLK
Trigger: TTTCAGGAGTTCATCAGACAAGCAAGTGAGGCTGAA...ACTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp TTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGCAGGGTGATCACCTTTaGCCCCACTATCAGAATAAT +
Preference number: 5 (lower is better)
Translates to: LCLANFNLLRFLSPYFLEQGDHL*PHYQNN
Trigger: ATTATTCTGATAGTGGGGCAAAAGGTGATCACCCTG...CTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp TGTGCTCTGACGGGGTATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCCTTTGGTTGTACCGTTaGCTATATAAAGAAGCATCT +
Preference number: 5 (lower is better)
Translates to: CALTGYIMHQLNVPTAKFLWLYR*LYKEAS
Trigger: AGATGCTTCTTTATATAGCAAACGGTACAACCAAAG...GAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATACCCCGTCAGAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGCAGGTTTGTTACCTGTaGGGTGAGGAGGTTGATGTG +
Preference number: 5 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSQVCYL*GEEVDV
Trigger: CACATCAACCTCCTCACCCAACAGGTAACAAACCTG...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAGGACTGAAGTTTTTGTaGTTCAAGTTGCTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSGLKFL*FKLLQG
Trigger: GCCCTGCAGCAACTTGAACAACAAAAACTTCAGTCC...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCACCGGGACTGAAGTTTTaGTTGTTCAAGTTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSPGLKF*LFKLLQ
Trigger: CTGCAGCAACTTGAACAACAAAAACTTCAGTCCCGG...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGAGGTGGTACCACTTTTaGTGGCAGAGTGGTTGGCTT +
Preference number: 5 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSRWYHF*WQSGWL
Trigger: AAGCCAACCACTCTGCCACAAAAAGTGGTACCACCT...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAGATCTGAAGCGGGTATaGGAAGCTTTCTGGGATGTT +
Preference number: 5 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSDLKRV*EAFWDV
Trigger: AACATCCCAGAAAGCTTCCAATACCCGCTTCAGATC...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCAACATTAATTGGGATTaGGTGCTACCAGGCTACCCA +
Preference number: 5 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSNINWD*VLPGYP
Trigger: TGGGTAGCCTGGTAGCACCAAATCCCAATTAATGTT...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556893.5
CDS GCA 90 bp GTCTTTCATCAGGCGAATTTGAACATGCTGGAGATAGGCAGAGAATaGTATTCGGGCCTGCATTTTGCTAAGATTGCCATTATCTTGAAG +
Preference number: 5 (lower is better)
Translates to: VFHQANLNMLEIGRE*YSGLHFAKIAIILK
Trigger: CTTCAAGATAATGGCAATCTTAGCAAAATGCAGGCCCGAATAGCATTCTCTGCCTATCTCCAGCATGTTCAAATTCGCCTGATGAAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000555422.5
ENST00000556893.5
ENST00000557636.5
CDS CCA 90 bp CCAATTACTCTAATATTGTTGTCCTTTGTAAGAATAGCGTCGGCATaGAATACCAAAACTGGAATTCTCCTGCAGCCTCCAGTCCACATG +
Preference number: 5 (lower is better)
Translates to: PITLILLSFVRIASA*NTKTGILLQPPVHM
Trigger: CATGTGGACTGGAGGCTGCAGGAGAATTCCAGTTTTGGTATTCCATGCCGACGCTATTCTTACAAAGGACAACAATATTAGAGTAATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286650.9
ENST00000298832.14
ENST00000555290.5
ENST00000556173.5
ENST00000556685.1
ENST00000556977.5
ENST00000557636.5
CDS-3UTR CAA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGAGGCGCACGTCAAACTaGAAATCATCTATGAGCAGG +
Preference number: 5 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSRRTSN*KSSMSR
Trigger: CCTGCTCATAGATGATTTCAAGTTTGACGTGCGCCT...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CAA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAAATGTTCTTGGCTCCTaGATCATATCGCACAGTTGC +
Preference number: 5 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSNVLGS*IISHSC
Trigger: GCAACTGTGCGATATGATCAAGGAGCCAAGAACATT...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CAA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTGTATCTCTGCCTTCTaGTTTCAGGTACCTAAGCAT +
Preference number: 5 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSCISAF*FQVPKH
Trigger: ATGCTTAGGTACCTGAAACAAGAAGGCAGAGATACA...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CAA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCACCCTTCGTAAAACTTaGATCTCCTCCATTGACAGA +
Preference number: 5 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSTLRKT*ISSIDR
Trigger: TCTGTCAATGGAGGAGATCAAAGTTTTACGAAGGGT...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp TATATAATGCATCAGCTGAATGTCCCCACTGCCAAGTTCCATCAAAACCCAGAACATGCAGCTTGGCCTTaGAATTCAGACTCTCTATCT +
Preference number: 5 (lower is better)
Translates to: YIMHQLNVPTAKFHQNPEHAAWP*NSDSLS
Trigger: AGATAGAGAGTCTGAATTCAAAGGCCAAGCTGCATG...TTCTGGGTTTTGATGGAACTTGGCAGTGGGGACATTCAGCTGATGCATTATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp TCATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTATTCATTTCAGCTGGTaGGGTAATCACTGGGTATTT +
Preference number: 5 (lower is better)
Translates to: SFSLSFALVPGKLQSPQVIHFSW*GNHWVF
Trigger: AAATACCCAGTGATTACCCAACCAGCTGAAATGAAT...AACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCATTCAGCCTCACTTGCTaGTCTGATGAACTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSFSLTC*SDELLK
Trigger: TTTCAGGAGTTCATCAGACAAGCAAGTGAGGCTGAA...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp TCATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTAATTTCTGTCGTCTGTaGCTGTTTAGGTGGCTTTAT +
Preference number: 5 (lower is better)
Translates to: SFSLSFALVPGKLQSPQVNFCRL*LFRWLY
Trigger: ATAAAGCCACCTAAACAGCAACAGACGACAGAAATT...AACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTGTTCAGTAAAATTGTaGGCTGGTGAGGCATGCTGG +
Preference number: 5 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSCSVKL*AGEACW
Trigger: CCAGCATGCCTCACCAGCCAACAATTTTACTGAACA...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGCTGTGTTCAGTAAAATaGTTGGCTGGTGAGGCATGC +
Preference number: 5 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSLCSVK*LAGEAC
Trigger: GCATGCCTCACCAGCCAACAATTTTACTGAACACAG...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp TTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTAGCTGTAACCATACTTaGGTTGTACCGTTTGCTATA +
Preference number: 5 (lower is better)
Translates to: FSLSFALVPGKLQSPQVSSCNHT*VVPFAI
Trigger: TATAGCAAACGGTACAACCAAAGTATGGTTACAGCT...AGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp TCATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTTCATTGTCCATAAATaGGAGTTAGGTAGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: SFSLSFALVPGKLQSPQVFIVHK*ELGSVW
Trigger: CCAGACACTACCTAACTCCAATTTATGGACAATGAA...AACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS GCA 90 bp GGAACAATGTGCCCTCGCAGGACTCCCGCAAACAGTGCATCATATTaGCATGCGTTATGCTTTTGTAAAGCTTTGATAAAGCTTTTATAT +
Preference number: 5 (lower is better)
Translates to: GTMCPRRTPANSASY*HALCFCKALIKLLY
Trigger: ATATAAAAGCTTTATCAAAGCTTTACAAAAGCATAACGCATGGCAATATGATGCACTGTTTGCGGGAGTCCTGCGAGGGCACATTGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS-3UTR CAA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCATATAGTCAGTGCTGCTaGGGTGAACTTCATGAAATC +
Preference number: 5 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSYSQCC*GELHEI
Trigger: GATTTCATGAAGTTCACCCAAGCAGCACTGACTATA...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CAA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAAAAGTGATTAACTTTTaGTGCTTCAGAGAGGGTGCG +
Preference number: 5 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSKVINF*CFREGA
Trigger: CGCACCCTCTCTGAAGCACAAAAAGTTAATCACTTT...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CAA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAATTCGAATAATGTTTTaGTACAGTCGGTCCTTCCGG +
Preference number: 5 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSIRIMF*YSRSFR
Trigger: CCGGAAGGACCGACTGTACAAAAACATTATTCGAAT...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557636.5
CDS-3UTR CAA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGCATGCAGCTTGGCCTTaGAATTCAGACTCTCTATCT +
Preference number: 5 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSHAAWP*NSDSLS
Trigger: AGATAGAGAGTCTGAATTCAAAGGCCAAGCTGCATG...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAATTCGGGCCTGCATTTaGCTAAGATTGCCATTATCT +
Preference number: 5 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSIRACI*LRLPLS
Trigger: AGATAATGGCAATCTTAGCAAAATGCAGGCCCGAAT...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTTATTTGATGCTCGCTaGAGGAAACGAACAACCAGC +
Preference number: 5 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSLFDAR*RKRTTS
Trigger: GCTGGTTGTTCGTTTCCTCAAGCGAGCATCAAATAA...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp TTCATTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTAGCAGACTTGTTCTTTaGGGTATAAAAAGTCAACAC +
Preference number: 5 (lower is better)
Translates to: FIQSEFCPCAWQTSISSGSRLVL*GIKSQH
Trigger: GTGTTGACTTTTTATACCCAAAAGAACAAGTCTGCT...ACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGCAGGGTGATCACCTTTaGCCCCACTATCAGAATAAT +
Preference number: 5 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSQGDHL*PHYQNN
Trigger: ATTATTCTGATAGTGGGGCAAAAGGTGATCACCCTG...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCAATTTCTGTCGTCTGTaGCTGTTTAGGTGGCTTTAT +
Preference number: 5 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSNFCRL*LFRWLY
Trigger: ATAAAGCCACCTAAACAGCAACAGACGACAGAAATT...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp GCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTCTTTGGTTGTACCGTTaGCTATATAAAGAAGCATCT +
Preference number: 5 (lower is better)
Translates to: ALVPGKLQSPQVSFSIFPLWLYR*LYKEAS
Trigger: AGATGCTTCTTTATATAGCAAACGGTACAACCAAAG...AGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp TTCAGTCTGAGTTTTGCCCTTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTCTTTGGTTGTACCGTTaGCTATATAAAGAAGCATCT +
Preference number: 5 (lower is better)
Translates to: FSLSFALVPGKLQSPQVSLWLYR*LYKEAS
Trigger: AGATGCTTCTTTATATAGCAAACGGTACAACCAAAG...AGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAAGGGCAAAACTCAGACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp TTGTGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGCTGTAACCATACTTaGGTTGTACCGTTTGCTATA +
Preference number: 5 (lower is better)
Translates to: LCLANFNLLRFLSPYFLESCNHT*VVPFAI
Trigger: TATAGCAAACGGTACAACCAAAGTATGGTTACAGCT...CTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS TCA 90 bp ACTAAAAGCTGCAGATCTGGAGATGCTACAGACTATCGACATAGTTaGACAGACTCTGAGGGTTACAACAAAGCAAGTGAATGTCAAGAT +
Preference number: 5 (lower is better)
Translates to: TKSCRSGDATDYRHS*TDSEGYNKASECQD
Trigger: ATCTTGACATTCACTTGCTTTGTTGTAACCCTCAGAGTCTGTTCAACTATGTCGATAGTCTGTAGCATCTCCAGATCTGCAGCTTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS GCA 90 bp CCTCGCAGGACTCCCGCAAACAGTGCATCATATTGCCATGCGTTATaGTTTTGTAAAGCTTTGATAAAGCTTTTATATTCACCTACACTT +
Preference number: 5 (lower is better)
Translates to: PRRTPANSASYCHAL*FCKALIKLLYSPTL
Trigger: AAGTGTAGGTGAATATAAAAGCTTTATCAAAGCTTTACAAAAGCATAACGCATGGCAATATGATGCACTGTTTGCGGGAGTCCTGCGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS-3UTR CAA 90 bp ACTATCCCCCAGTCACTCTTGTTTTTAATTCTTTCATTTCCCACAAACAACAGGACTGGATCAAGCAATTaGGATGGCACAGATTCCTGT +
Preference number: 5 (lower is better)
Translates to: TIPQSLLFLILSFPTNNRTGSSN*DGTDSC
Trigger: ACAGGAATCTGTGCCATCCAAATTGCTTGATCCAGT...CCTGTTGTTTGTGGGAAATGAAAGAATTAAAAACAAGAGTGACTGGGGGATAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556977.5
CDS-3UTR CAA 90 bp AGTTTTGGTAGTCTCCAATGTTCCCAGGGCTCAAACTCAAAATCTCAGTTAAGAAAAGTGATTAACTTTTaGTGCTTCAGAGAGGGTGCG +
Preference number: 5 (lower is better)
Translates to: SFGSLQCSQGSNSKSQLRKVINF*CFREGA
Trigger: CGCACCCTCTCTGAAGCACAAAAAGTTAATCACTTT...TCTTAACTGAGATTTTGAGTTTGAGCCCTGGGAACATTGGAGACTACCAAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR CAA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAATTCATTTCAGCTGGTaGGGTAATCACTGGGTATTT +
Preference number: 5 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSIHFSW*GNHWVF
Trigger: AAATACCCAGTGATTACCCAACCAGCTGAAATGAAT...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp GGGCAAAGGGAAGGTAAAAGATACAAGTGTGCTCTGACGGGGTATATAATGCATAGCAGACTTGTTCTTTaGGGTATAAAAAGTCAACAC +
Preference number: 5 (lower is better)
Translates to: GQREGKRYKCALTGYIMHSRLVL*GIKSQH
Trigger: GTGTTGACTTTTTATACCCAAAAGAACAAGTCTGCT...ATGCATTATATACCCCGTCAGAGCACACTTGTATCTTTTACCTTCCCTTTGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298832.14
CDS-3UTR CAA 90 bp TGCCTGGCAAACTTCAATCTCCTCAGGTTTCTTTCTCCATATTTCCTGGAGAGTAGCAGACTTGTTCTTTaGGGTATAAAAAGTCAACAC +
Preference number: 5 (lower is better)
Translates to: CLANFNLLRFLSPYFLESSRLVL*GIKSQH
Trigger: GTGTTGACTTTTTATACCCAAAAGAACAAGTCTGCT...ACTCTCCAGGAAATATGGAGAAAGAAACCTGAGGAGATTGAAGTTTGCCAGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554510.5
ENST00000556893.5
CDS-3UTR CAA 90 bp GCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCAGCAGACTTGTTCTTTaGGGTATAAAAAGTCAACAC +
Preference number: 5 (lower is better)
Translates to: AHLQETVQMHVVVCRLSSSRLVL*GIKSQH
Trigger: GTGTTGACTTTTTATACCCAAAAGAACAAGTCTGCT...GGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCATTTTTGTTGTTCAAGTaGCTGCAGGGCAAATTGAAG +
Preference number: 5 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSFLLFK*LQGKLK
Trigger: CTTCAATTTGCCCTGCAGCAACTTGAACAACAAAAA...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCATTCATTGTCCATAAATaGGAGTTAGGTAGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSFIVHK*ELGSVW
Trigger: CCAGACACTACCTAACTCCAATTTATGGACAATGAA...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCAATACCACAAATAGTTTaGAAAGGAGGATCTGAAGCG +
Preference number: 5 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSIPQIV*KGGSEA
Trigger: CGCTTCAGATCCTCCTTTCAAAACTATTTGTGGTAT...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp AAAGGAAATTTCCTTCCCACTTCCCAAATGAGCATTGTTCAGCGAGGTTGTTTGCATTGTTCAGCGAGGTaGTTTGAGTTCAGTTATATG +
Preference number: 5 (lower is better)
Translates to: KGNFLPTSQMSIVQRGCLHCSAR*FEFSYM
Trigger: CATATAACTGAACTCAAACAACCTCGCTGAACAATG...CAAACAACCTCGCTGAACAATGCTCATTTGGGAAGTGGGAAGGAAATTTCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555018.3
CDS-3UTR CAA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGAATTTCTGTCGTCTGTaGCTGTTTAGGTGGCTTTAT +
Preference number: 5 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSNFCRL*LFRWLY
Trigger: ATAAAGCCACCTAAACAGCAACAGACGACAGAAATT...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp CATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTCCTCACTTTGGTTGTACCGTTaGCTATATAAAGAAGCATCT +
Preference number: 5 (lower is better)
Translates to: HLQETVQMHVVVCRLSSSLWLYR*LYKEAS
Trigger: AGATGCTTCTTTATATAGCAAACGGTACAACCAAAG...TGAGGACGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGAGCTGTAACCATACTTaGGTTGTACCGTTTGCTATA +
Preference number: 5 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSSCNHT*VVPFAI
Trigger: TATAGCAAACGGTACAACCAAAGTATGGTTACAGCT...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTTTTTGTTGTTCAAGTaGCTGCAGGGCAAATTGAAG +
Preference number: 5 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSFLLFK*LQGKLK
Trigger: CTTCAATTTGCCCTGCAGCAACTTGAACAACAAAAA...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp AAAGCTCATTTACAAGAGACAGTTCAGATGCATGTAGTTGTTTGTAGGCTGTCGTTCATTGTCCATAAATaGGAGTTAGGTAGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: KAHLQETVQMHVVVCRLSFIVHK*ELGSVW
Trigger: CCAGACACTACCTAACTCCAATTTATGGACAATGAA...CGACAGCCTACAAACAACTACATGCATCTGAACTGTCTCTTGTAAATGAGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS-3UTR CAA 90 bp ATAGTGATACTTCAAAACGTGAGAGCACGTGTGTCTACAAATATTATCGACAATATTCGAATAATGTTTTaGTACAGTCGGTCCTTCCGG +
Preference number: 5 (lower is better)
Translates to: IVILQNVRARVSTNIIDNIRIMF*YSRSFR
Trigger: CCGGAAGGACCGACTGTACAAAAACATTATTCGAAT...ATTGTCGATAATATTTGTAGACACACGTGCTCTCACGTTTTGAAGTATCACTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS-3UTR CAA 90 bp CCAGGGCTCAAACTCAAAATCTCAGTTAAGAATATGACAGGACTTATAAATGCTTTTCCCATCTTCCAATaGCATTTTCTAGCCAATCCT +
Preference number: 5 (lower is better)
Translates to: PGLKLKISVKNMTGLINAFPIFQ*HFLANP
Trigger: AGGATTGGCTAGAAAATGCAATTGGAAGATGGGAAA...AGCATTTATAAGTCCTGTCATATTCTTAACTGAGATTTTGAGTTTGAGCCCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286650.9
CDS TCA 90 bp GGAATATTAAGCAAAACATATTGCTATGATGTCCTTGAGAAACAGTaGAGCACAACCTCCATCTCTTTTCTCTATTCCCAAAGTCCAATT +
Preference number: 5 (lower is better)
Translates to: GILSKTYCYDVLEKQ*STTSISFLYSQSPI
Trigger: AATTGGACTTTGGGAATAGAGAAAAGAGATGGAGGTTGTGCTTCACTGTTTCTCAAGGACATCATAGCAATATGTTTTGCTTAATATTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS TCA 72 bp CGGCGCGCCCGGAAGCCAACAGCTACTCCCGGGCTCTaGGCGGGAAGTCCTGCTGCAGGCGCCAGCCCGGAC +
Preference number: 6 (lower is better)
Translates to: RRARKPTATPGL*AGSPAAGASPD
Trigger: GTCCGGGCTGGCGCCTGCAGCAGGACTTCCCGCTCAGAGCCCGGGAGTAGCTGTTGGCTTCCGGGCGCGCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556685.1
CDS GCA 72 bp AACAGCTACTCCCGGGCTCTGAGCGGGAAGTCCTGCTaGAGGCGCCAGCCCGGACCCGGGAATGCTCCTCCC +
Preference number: 6 (lower is better)
Translates to: NSYSRALSGKSC*RRQPGPGNAPP
Trigger: GGGAGGAGCATTCCCGGGTCCGGGCTGGCGCCTGCAGCAGGACTTCCCGCTCAGAGCCCGGGAGTAGCTGTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556685.1
CDS GCA 72 bp GCCAACAGCTACTCCCGGGCTCTGAGCGGGAAGTCCTaGTGCAGGCGCCAGCCCGGACCCGGGAATGCTCCT +
Preference number: 6 (lower is better)
Translates to: ANSYSRALSGKS*CRRQPGPGNAP
Trigger: AGGAGCATTCCCGGGTCCGGGCTGGCGCCTGCAGCAGGACTTCCCGCTCAGAGCCCGGGAGTAGCTGTTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556685.1
CDS CCA 72 bp GCGCGGGCGCAGGCGTTTACCTGTCTCATCTTCCCATaGTTCGGGGCGAGCAGGCGTGGACCGCGCTCTGCG +
Preference number: 6 (lower is better)
Translates to: ARAQAFTCLIFP*FGASRRGPRSA
Trigger: CGCAGAGCGCGGTCCACGCCTGCTCGCCCCGAACCATGGGAAGATGAGACAGGTAAACGCCTGCGCCCGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556685.1
CDS TCA 72 bp ACCAGCTGCAGCCGGGAGACTGCCAAAGCGCTGCAGTaGCTAGGCAGCGCCCTACAGAGCCGTCTGGGAGGG +
Preference number: 6 (lower is better)
Translates to: TSCSRETAKALQ*LGSALQSRLGG
Trigger: CCCTCCCAGACGGCTCTGTAGGGCGCTGCCTAGTCACTGCAGCGCTTTGGCAGTCTCCCGGCTGCAGCTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS CCA 72 bp CTGTCTCATCTTCCCATGGTTCGGGGCGAGCAGGCGTaGACCGCGCTCTGCGCCTACCTCCCTCCTCCTTCC +
Preference number: 6 (lower is better)
Translates to: LSHLPMVRGEQA*TALCAYLPPPS
Trigger: GGAAGGAGGAGGGAGGTAGGCGCAGAGCGCGGTCCACGCCTGCTCGCCCCGAACCATGGGAAGATGAGACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286650.9
ENST00000298832.14
ENST00000556685.1
ENST00000556977.5
ENST00000557636.5
CDS GCA 72 bp CCTTCCCCAGGAAGGCTCAGGGCAGCCGCCGACGGCTaGTTCCCCGGTTACTACAACAACCAACAAGCAACC +
Preference number: 6 (lower is better)
Translates to: PSPGRLRAAADG*FPGYYNNQQAT
Trigger: GGTTGCTTGTTGGTTGTTGTAGTAACCGGGGAAGCAGCCGTCGGCGGCTGCCCTGAGCCTTCCTGGGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298832.14
ENST00000556685.1
ENST00000556977.5
CDS CCA 72 bp AATTTGGATGGCACAGATTCCTGTCTCATCTTCCCATaGTTCGGGGCGAGCAGGCGTGGACCGCGCTCTGCG +
Preference number: 6 (lower is better)
Translates to: NLDGTDSCLIFP*FGASRRGPRSA
Trigger: CGCAGAGCGCGGTCCACGCCTGCTCGCCCCGAACCATGGGAAGATGAGACAGGAATCTGTGCCATCCAAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286650.9
ENST00000298832.14
ENST00000556977.5
ENST00000557636.5
CDS CCA 72 bp TCCCAGAATCCTCTCTTCCCACCTCCGCCGCATGGGTaGAACTCAGCTCCCTGGATGGATACTTGCATGCCC +
Preference number: 6 (lower is better)
Translates to: SQNPLFPPPPHG*NSAPWMDTCMP
Trigger: GGGCATGCAAGTATCCATCCAGGGAGCTGAGTTCCACCCATGCGGCGGAGGTGGGAAGAGAGGATTCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS CAA 90 bp GTTCGTGGTTGGGTGGGGGTTTGGGAACCAGGGAGGCGCAAGAACTaGGAGGTGGTACCACTTTTTGTGGCAGAGTGGTTGGCTTCTGGC +
Preference number: 6 (lower is better)
Translates to: VRGWVGVWEPGRRKN*EVVPLFVAEWLASG
Trigger: GCCAGAAGCCAACCACTCTGCCACAAAAAGTGGTACCACCTCCAAGTTCTTGCGCCTCCCTGGTTCCCAAACCCCCACCCAACCACGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000556893.5
ENST00000557219.1
ENST00000557636.5
CDS CAA 90 bp GGAGGACCCTTTGGAAGCTTTCTGGGATGTTGCCCTTCTGAGCACTaGTTCGTGGTTGGGTGGGGGTTTGGGAACCAGGGAGGCGCAAGA +
Preference number: 6 (lower is better)
Translates to: GGPFGSFLGCCPSEH*FVVGWGFGNQGGAR
Trigger: TCTTGCGCCTCCCTGGTTCCCAAACCCCCACCCAACCACGAACAAGTGCTCAGAAGGGCAACATCCCAGAAAGCTTCCAAAGGGTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298832.14
ENST00000554972.1
ENST00000557219.1
CDS CCA 72 bp GGGTGGGGGTTTGGGAACCAGGGAGGCGCAAGAACTTaGAGGTGGTACCACTTTTTGTGGCAGAGTGGTTGG +
Preference number: 6 (lower is better)
Translates to: GWGFGNQGGART*RWYHFLWQSGW
Trigger: CCAACCACTCTGCCACAAAAAGTGGTACCACCTCCAAGTTCTTGCGCCTCCCTGGTTCCCAAACCCCCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000556893.5
ENST00000557219.1
ENST00000557636.5
CDS CCA 72 bp GGGCTGAGCCCACGAGGTTTTTCATTTCCGCATCACTaGCAGAGAGTGGACGGCAACGCTGCTTGGCCTTTG +
Preference number: 6 (lower is better)
Translates to: GLSPRGFSFPHH*QRVDGNAAWPL
Trigger: CAAAGGCCAAGCAGCGTTGCCGTCCACTCTCTGCCAGTGATGCGGAAATGAAAAACCTCGTGGGCTCAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554148.5
ENST00000557636.5
CDS CAA 90 bp GAAGCGGGTATTGGAAGCTTTCTGGGATGTTGCCCTTCTGAGCACTaGTTCGTGGTTGGGTGGGGGTTTGGGAACCAGGGAGGCGCAAGA +
Preference number: 6 (lower is better)
Translates to: EAGIGSFLGCCPSEH*FVVGWGFGNQGGAR
Trigger: TCTTGCGCCTCCCTGGTTCCCAAACCCCCACCCAACCACGAACAAGTGCTCAGAAGGGCAACATCCCAGAAAGCTTCCAATACCCGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS GCA 72 bp AAGTTGCTGCAGGGCAAATTGAAGCTGATAGCTGCCTaGTGTGGGGTGATACTTGTGCTGGGGGACCACCCC +
Preference number: 6 (lower is better)
Translates to: KLLQGKLKLIAA*CGVILVLGDHP
Trigger: GGGGTGGTCCCCCAGCACAAGTATCACCCCACAGCAGGCAGCTATCAGCTTCAATTTGCCCTGCAGCAACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS CCA 72 bp GGGCTGAGCCCACGAGGTTTTTCATTTCCGCATCACTaGCAGAGAGTGGACGGCAACGCTGAGGTTTCTGGA +
Preference number: 6 (lower is better)
Translates to: GLSPRGFSFPHH*QRVDGNAEVSG
Trigger: TCCAGAAACCTCAGCGTTGCCGTCCACTCTCTGCCAGTGATGCGGAAATGAAAAACCTCGTGGGCTCAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298832.14
ENST00000555422.5
CDS CCA 72 bp ACCTTCCCAGAATCCTCTCTTCCCACCTCCGCCGCATaGGTGGAACTCAGCTCCCTGGATGGATACTTGCAT +
Preference number: 6 (lower is better)
Translates to: TFPESSLPTSAA*VELSSLDGYLH
Trigger: ATGCAAGTATCCATCCAGGGAGCTGAGTTCCACCCATGCGGCGGAGGTGGGAAGAGAGGATTCTGGGAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS CAA 72 bp TGGGTGGGGGTTTGGGAACCAGGGAGGCGCAAGAACTaGGAGGTGGTACCACTTTTTGTGGCAGAGTGGTTG +
Preference number: 6 (lower is better)
Translates to: WVGVWEPGRRKN*EVVPLFVAEWL
Trigger: CAACCACTCTGCCACAAAAAGTGGTACCACCTCCAAGTTCTTGCGCCTCCCTGGTTCCCAAACCCCCACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000556893.5
ENST00000557219.1
ENST00000557636.5
CDS CAA 72 bp TTCTGGGATGTTGCCCTTCTGAGCACTTGTTCGTGGTaGGGTGGGGGTTTGGGAACCAGGGAGGCGCAAGAA +
Preference number: 6 (lower is better)
Translates to: FWDVALLSTCSW*GGGLGTREAQE
Trigger: TTCTTGCGCCTCCCTGGTTCCCAAACCCCCACCCAACCACGAACAAGTGCTCAGAAGGGCAACATCCCAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000554972.1
ENST00000556893.5
ENST00000557219.1
ENST00000557636.5
CDS CAA 90 bp GTGCCGGGCTCGACTCTGGTCCAGGAGCTGCCGGGACTGAAGTTTTaGTTGTTCAAGTTGCTGCAGGGCAAATTGAAGCTGATAGCTGCC +
Preference number: 6 (lower is better)
Translates to: VPGSTLVQELPGLKF*LFKLLQGKLKLIAA
Trigger: GGCAGCTATCAGCTTCAATTTGCCCTGCAGCAACTTGAACAACAAAAACTTCAGTCCCGGCAGCTCCTGGACCAGAGTCGAGCCCGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS CAA 90 bp TTGGAAGCTTTCTGGGATGTTGCCCTTCTGAGCACTTGTTCGTGGTaGGGTGGGGGTTTGGGAACCAGGGAGGCGCAAGAACTTGGAGGT +
Preference number: 6 (lower is better)
Translates to: LEAFWDVALLSTCSW*GGGLGTREAQELGG
Trigger: ACCTCCAAGTTCTTGCGCCTCCCTGGTTCCCAAACCCCCACCCAACCACGAACAAGTGCTCAGAAGGGCAACATCCCAGAAAGCTTCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000554972.1
ENST00000556893.5
ENST00000557219.1
ENST00000557636.5
CDS TCA 72 bp TGCCGGGCTCGACTCTGGTCCAGGAGCTGCCGGGACTaGAGTTTTTGTTGTTCAAGTTGCTGCAGGGCAAAT +
Preference number: 6 (lower is better)
Translates to: CRARLWSRSCRD*SFCCSSCCRAN
Trigger: ATTTGCCCTGCAGCAACTTGAACAACAAAAACTTCAGTCCCGGCAGCTCCTGGACCAGAGTCGAGCCCGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS CCA 72 bp GGGTTTGGGAACCAGGGAGGCGCAAGAACTTGGAGGTaGTACCACTTTTTGTGGCAGAGTGGTTGGCTTCTG +
Preference number: 6 (lower is better)
Translates to: GFGNQGGARTWR*YHFLWQSGWLL
Trigger: CAGAAGCCAACCACTCTGCCACAAAAAGTGGTACCACCTCCAAGTTCTTGCGCCTCCCTGGTTCCCAAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000556893.5
ENST00000557219.1
ENST00000557636.5
CDS CCA 72 bp CGTGACTACCCTGGGTACTCCAAGAAGGCAGCCAAATaGGCCCTGTCCATCACTGATCCCAGAAGAGGATCT +
Preference number: 6 (lower is better)
Translates to: RDYPGYSKKAAK*ALSITDPRRGS
Trigger: AGATCCTCTTCTGGGATCAGTGATGGACAGGGCCCATTTGGCTGCCTTCTTGGAGTACCCAGGGTAGTCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554878.1
CDS CAA 72 bp AAGGGTTTCGCCTGGAAGACTCAAAGGTGGGATAAATaGGCCGAGTTGATGCCCGCTGGGCAGGATCTTGGC +
Preference number: 6 (lower is better)
Translates to: KGFAWKTQRWDK*AELMPAGQDLG
Trigger: GCCAAGATCCTGCCCAGCGGGCATCAACTCGGCCAATTTATCCCACCTTTGAGTCTTCCAGGCGAAACCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554148.5
ENST00000554878.1
ENST00000555422.5
ENST00000557636.5
CDS CAA 72 bp CAGGGAGGCGCAAGAACTTGGAGGTGGTACCACTTTTaGTGGCAGAGTGGTTGGCTTCTGGCCACTAGCTGT +
Preference number: 6 (lower is better)
Translates to: QGGARTWRWYHF*WQSGWLLATSC
Trigger: ACAGCTAGTGGCCAGAAGCCAACCACTCTGCCACAAAAAGTGGTACCACCTCCAAGTTCTTGCGCCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000556893.5
ENST00000557219.1
ENST00000557636.5
CDS TCA 72 bp CCTGGAAGACTCAAAGGTGGGATAAATTGGCCGAGTTaGTGCCCGCTGGGCAGGATCTTGGCACACAAATCC +
Preference number: 6 (lower is better)
Translates to: PGRLKGGINWPS*CPLGRILAHKS
Trigger: GGATTTGTGTGCCAAGATCCTGCCCAGCGGGCATCAACTCGGCCAATTTATCCCACCTTTGAGTCTTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298832.14
ENST00000554148.5
ENST00000555422.5
ENST00000557636.5
CDS TCA 72 bp CCATCTGTTCATCCTCTTTGGCAGCCCAACTGGCACTaGACGTCTGACCGCCACTGTCTTTCATCAGGCGAA +
Preference number: 6 (lower is better)
Translates to: PSVHPLWQPNWH*TSDRHCLSSGE
Trigger: TTCGCCTGATGAAAGACAGTGGCGGTCAGACGTTCAGTGCCAGTTGGGCTGCCAAAGAGGATGAACAGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000555422.5
ENST00000556893.5
ENST00000557636.5
CDS TCA 72 bp TTGGAAGGAAGAAAAGGGACCAATGGTGTGACTTCCTaGTCGACAGCGTGGCAGGCCAGTAGGGCTTGGGAT +
Preference number: 6 (lower is better)
Translates to: LEGRKGTNGVTS*STAWQASRAWD
Trigger: ATCCCAAGCCCTACTGGCCTGCCACGCTGTCGATCAGGAAGTCACACCATTGGTCCCTTTTCTTCCTTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS TCA 72 bp TGTGGTTGCTGGACTTCAAGAGGCCTGGCACAAACGTaGCTACCCTGGGTACTCCAAGAAGGCAGCCAAATG +
Preference number: 6 (lower is better)
Translates to: CGCWTSRGLAQT*LPWVLQEGSQM
Trigger: CATTTGGCTGCCTTCTTGGAGTACCCAGGGTAGTCACGTTTGTGCCAGGCCTCTTGAAGTCCAGCAACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554878.1
CDS TCA 72 bp CGCCCTACAGAGCCGTCTGGGAGGGGATTACCAGCCTaGTCCCTTGTCTTTAGAGCCAGAAATGACTCAAAC +
Preference number: 6 (lower is better)
Translates to: RPTEPSGRGLPA*SLVFRARNDSN
Trigger: GTTTGAGTCATTTCTGGCTCTAAAGACAAGGGATCAGGCTGGTAATCCCCTCCCAGACGGCTCTGTAGGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS TCA 72 bp ATCTTATGGAAGAGAACAAGAGGCCCAAGAGCTCTCTaGTCTGCTGTCAACCAGCTGCAGCCGGGAGACTGC +
Preference number: 6 (lower is better)
Translates to: ILWKRTRGPRAL*SAVNQLQPGDC
Trigger: GCAGTCTCCCGGCTGCAGCTGGTTGACAGCAGATCAGAGAGCTCTTGGGCCTCTTGTTCTCTTCCATAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS GCA 72 bp GTTCAAGTTGCTGCAGGGCAAATTGAAGCTGATAGCTaGCTGCTGTGGGGTGATACTTGTGCTGGGGGACCA +
Preference number: 6 (lower is better)
Translates to: VQVAAGQIEADS*LLWGDTCAGGP
Trigger: TGGTCCCCCAGCACAAGTATCACCCCACAGCAGGCAGCTATCAGCTTCAATTTGCCCTGCAGCAACTTGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS CCA 72 bp GTTTCTGGAAAGGGTTTCGCCTGGAAGACTCAAAGGTaGGATAAATTGGCCGAGTTGATGCCCGCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: VSGKGFAWKTQR*DKLAELMPAGQ
Trigger: CTGCCCAGCGGGCATCAACTCGGCCAATTTATCCCACCTTTGAGTCTTCCAGGCGAAACCCTTTCCAGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554148.5
ENST00000554878.1
ENST00000555422.5
ENST00000557636.5
CDS CCA 72 bp ACACCTTCCCTGTCATCTATCCAGTTGCAGAAGAGCTaGTGCCCACTAACCTGTAGAGCTGGTGATGGGCAC +
Preference number: 6 (lower is better)
Translates to: TPSLSSIQLQKS*CPLTCRAGDGH
Trigger: GTGCCCATCACCAGCTCTACAGGTTAGTGGGCACCAGCTCTTCTGCAACTGGATAGATGACAGGGAAGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557219.1
CDS CCA 72 bp AGAGACAGCACCTCAGGCAGCCTTGCCAGGAGCCACTaGGTTTCATCCTGGCCTGACCCAGAAAAATCTTAT +
Preference number: 6 (lower is better)
Translates to: RDSTSGSLARSH*VSSWPDPEKSY
Trigger: ATAAGATTTTTCTGGGTCAGGCCAGGATGAAACCCAGTGGCTCCTGGCAAGGCTGCCTGAGGTGCTGTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS CAA 72 bp GCCTGGAAGACTCAAAGGTGGGATAAATTGGCCGAGTaGATGCCCGCTGGGCAGGATCTTGGCACACAAATC +
Preference number: 6 (lower is better)
Translates to: AWKTQRWDKLAE*MPAGQDLGTQI
Trigger: GATTTGTGTGCCAAGATCCTGCCCAGCGGGCATCAACTCGGCCAATTTATCCCACCTTTGAGTCTTCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554148.5
ENST00000554878.1
ENST00000555422.5
ENST00000557636.5
CDS CAA 72 bp TTTGGAAGCTTTCTGGGATGTTGCCCTTCTGAGCACTaGTTCGTGGTTGGGTGGGGGTTTGGGAACCAGGGA +
Preference number: 6 (lower is better)
Translates to: FGSFLGCCPSEH*FVVGWGFGNQG
Trigger: TCCCTGGTTCCCAAACCCCCACCCAACCACGAACAAGTGCTCAGAAGGGCAACATCCCAGAAAGCTTCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298832.14
ENST00000554972.1
ENST00000557219.1
CDS CAA 72 bp ATTGGAAGCTTTCTGGGATGTTGCCCTTCTGAGCACTaGTTCGTGGTTGGGTGGGGGTTTGGGAACCAGGGA +
Preference number: 6 (lower is better)
Translates to: IGSFLGCCPSEH*FVVGWGFGNQG
Trigger: TCCCTGGTTCCCAAACCCCCACCCAACCACGAACAAGTGCTCAGAAGGGCAACATCCCAGAAAGCTTCCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS CAA 90 bp ACTCTGGTCCAGGAGCTGCCGGGACTGAAGTTTTTGTTGTTCAAGTaGCTGCAGGGCAAATTGAAGCTGATAGCTGCCTGCTGTGGGGTG +
Preference number: 6 (lower is better)
Translates to: TLVQELPGLKFLLFK*LQGKLKLIAACCGV
Trigger: CACCCCACAGCAGGCAGCTATCAGCTTCAATTTGCCCTGCAGCAACTTGAACAACAAAAACTTCAGTCCCGGCAGCTCCTGGACCAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS GCA 72 bp GAACTGGGGCTCTCTTTGGAGGCAGAAGAGAGAATGTaGCAAGCCCAACACCTTCCCTGTCATCTATCCAGT +
Preference number: 6 (lower is better)
Translates to: ELGLSLEAEERM*QAQHLPCHLSS
Trigger: ACTGGATAGATGACAGGGAAGGTGTTGGGCTTGGCACATTCTCTCTTCTGCCTCCAAAGAGAGCCCCAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557219.1
CDS CCA 72 bp GACGGCAACGCTGAGGTTTCTGGAAAGGGTTTCGCCTaGAAGACTCAAAGGTGGGATAAATTGGCCGAGTTG +
Preference number: 6 (lower is better)
Translates to: DGNAEVSGKGFA*KTQRWDKLAEL
Trigger: CAACTCGGCCAATTTATCCCACCTTTGAGTCTTCCAGGCGAAACCCTTTCCAGAAACCTCAGCGTTGCCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298832.14
ENST00000555422.5
CDS CCA 72 bp CACGAGGTTTTTCATTTCCGCATCACTGGCAGAGAGTaGACGGCAACGCTGAGGTTTCTGGAAAGGGTTTCG +
Preference number: 6 (lower is better)
Translates to: HEVFHFRITGRE*TATLRFLERVS
Trigger: CGAAACCCTTTCCAGAAACCTCAGCGTTGCCGTCCACTCTCTGCCAGTGATGCGGAAATGAAAAACCTCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298832.14
ENST00000555422.5
CDS CCA 72 bp AAGGCTATCACTGTGGTTGCTGGACTTCAAGAGGCCTaGCACAAACGTGACTACCCTGGGTACTCCAAGAAG +
Preference number: 6 (lower is better)
Translates to: KAITVVAGLQEA*HKRDYPGYSKK
Trigger: CTTCTTGGAGTACCCAGGGTAGTCACGTTTGTGCCAGGCCTCTTGAAGTCCAGCAACCACAGTGATAGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554878.1
CDS CAA 90 bp AAGGGTTTCGCCTGGAAGACTCAAAGGTGGGATAAATTGGCCGAGTaGATGCCCGCTGGGCAGGATCTTGGCACACAAATCCTACAACAG +
Preference number: 6 (lower is better)
Translates to: KGFAWKTQRWDKLAE*MPAGQDLGTQILQQ
Trigger: CTGTTGTAGGATTTGTGTGCCAAGATCCTGCCCAGCGGGCATCAACTCGGCCAATTTATCCCACCTTTGAGTCTTCCAGGCGAAACCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298832.14
ENST00000554148.5
ENST00000555422.5
ENST00000557636.5
CDS CAA 90 bp GTTTCTGGAAAGGGTTTCGCCTGGAAGACTCAAAGGTGGGATAAATaGGCCGAGTTGATGCCCGCTGGGCAGGATCTTGGCACACAAATC +
Preference number: 6 (lower is better)
Translates to: VSGKGFAWKTQRWDK*AELMPAGQDLGTQI
Trigger: GATTTGTGTGCCAAGATCCTGCCCAGCGGGCATCAACTCGGCCAATTTATCCCACCTTTGAGTCTTCCAGGCGAAACCCTTTCCAGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554148.5
ENST00000554878.1
ENST00000555422.5
ENST00000557636.5
CDS CAA 90 bp AGCGCCCTACAGAGCCGTCTGGGAGGGGATTACCAGCCTGATCCCTaGTCTTTAGAGCCAGAAATGACTCAAACTTCACAAACAGCAAGG +
Preference number: 6 (lower is better)
Translates to: SALQSRLGGDYQPDP*SLEPEMTQTSQTAR
Trigger: CCTTGCTGTTTGTGAAGTTTGAGTCATTTCTGGCTCTAAAGACAAGGGATCAGGCTGGTAATCCCCTCCCAGACGGCTCTGTAGGGCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS CAA 90 bp ACTGGCACTGAACGTCTGACCGCCACTGTCTTTCATCAGGCGAATTaGAACATGCTGGAGATAGGCAGAGAATGCTATTCGGGCCTGCAT +
Preference number: 6 (lower is better)
Translates to: TGTERLTATVFHQAN*NMLEIGRECYSGLH
Trigger: ATGCAGGCCCGAATAGCATTCTCTGCCTATCTCCAGCATGTTCAAATTCGCCTGATGAAAGACAGTGGCGGTCAGACGTTCAGTGCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000555422.5
ENST00000556893.5
ENST00000557636.5
CDS CAA 90 bp TCAGTAACACAGAAAAGAGCTGTGGCCAAAAGGCTATCACTGTGGTaGCTGGACTTCAAGAGGCCTGGCACAAACGTGACTACCCTGGGT +
Preference number: 6 (lower is better)
Translates to: SVTQKRAVAKRLSLW*LDFKRPGTNVTTLG
Trigger: ACCCAGGGTAGTCACGTTTGTGCCAGGCCTCTTGAAGTCCAGCAACCACAGTGATAGCCTTTTGGCCACAGCTCTTTTCTGTGTTACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554878.1
CDS CAA 90 bp ACCTCGCTGTGGCACATGAGTTATCCTTCAACAGGTGTAGGCATTTaGAGTCAGAGAGGCCTGGACAATGAAGAGACAGCACCTCAGGCA +
Preference number: 6 (lower is better)
Translates to: TSLWHMSYPSTGVGI*SQRGLDNEETAPQA
Trigger: TGCCTGAGGTGCTGTCTCTTCATTGTCCAGGCCTCTCTGACTCAAAATGCCTACACCTGTTGAAGGATAACTCATGTGCCACAGCGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS TCA 72 bp CTCCAAGAAGGCAGCCAAATGGGCCCTGTCCATCACTaGTCCCAGAAGAGGATCTTGGCTATTTCAGCTTCT +
Preference number: 6 (lower is better)
Translates to: LQEGSQMGPVHH*SQKRILAISAS
Trigger: AGAAGCTGAAATAGCCAAGATCCTCTTCTGGGATCAGTGATGGACAGGGCCCATTTGGCTGCCTTCTTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554878.1
CDS GCA 72 bp GGACCTCTGAGGGCTACTGTGGGAATCACAAAAAGCTaGACCCAAATACCAGGGGGACAATTGCAACACTTC +
Preference number: 6 (lower is better)
Translates to: GPLRATVGITKS*TQIPGGQLQHF
Trigger: GAAGTGTTGCAATTGTCCCCCTGGTATTTGGGTGCAGCTTTTTGTGATTCCCACAGTAGCCCTCAGAGGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS CCA 72 bp TTCAGGTTTGTTACCTGTTGGGTGAGGAGGTTGATGTaGCTGGATGGAGAATACTGTCTCGCTGCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: FRFVTCWVRRLM*LDGEYCLAACF
Trigger: GAAGCAGGCAGCGAGACAGTATTCTCCATCCAGCCACATCAACCTCCTCACCCAACAGGTAACAAACCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS CCA 72 bp GGGAGGTCATCTGAGGTTTCTGGAAAGGGTTTCGCCTaGAAGACTCAAAGGTGGGATAAATTGGCCGAGTTG +
Preference number: 6 (lower is better)
Translates to: GRSSEVSGKGFA*KTQRWDKLAEL
Trigger: CAACTCGGCCAATTTATCCCACCTTTGAGTCTTCCAGGCGAAACCCTTTCCAGAAACCTCAGATGACCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554878.1
CDS CCA 72 bp ACACAGAAAAGAGCTGTGGCCAAAAGGCTATCACTGTaGTTGCTGGACTTCAAGAGGCCTGGCACAAACGTG +
Preference number: 6 (lower is better)
Translates to: TQKRAVAKRLSL*LLDFKRPGTNV
Trigger: CACGTTTGTGCCAGGCCTCTTGAAGTCCAGCAACCACAGTGATAGCCTTTTGGCCACAGCTCTTTTCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554878.1
CDS CAA 72 bp TCGACTCTGGTCCAGGAGCTGCCGGGACTGAAGTTTTaGTTGTTCAAGTTGCTGCAGGGCAAATTGAAGCTG +
Preference number: 6 (lower is better)
Translates to: STLVQELPGLKF*LFKLLQGKLKL
Trigger: CAGCTTCAATTTGCCCTGCAGCAACTTGAACAACAAAAACTTCAGTCCCGGCAGCTCCTGGACCAGAGTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS CAA 72 bp CAGAAAAGAGCTGTGGCCAAAAGGCTATCACTGTGGTaGCTGGACTTCAAGAGGCCTGGCACAAACGTGACT +
Preference number: 6 (lower is better)
Translates to: QKRAVAKRLSLW*LDFKRPGTNVT
Trigger: AGTCACGTTTGTGCCAGGCCTCTTGAAGTCCAGCAACCACAGTGATAGCCTTTTGGCCACAGCTCTTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554878.1
CDS CAA 90 bp GAGACAGGAGCTTCCTCTCGTAAAGTGCAGCATGCAGCTTGGCCTTaGAATTCAGACTCTCTATCTTCAATTCTGGCGCTCCATCAGCAG +
Preference number: 6 (lower is better)
Translates to: ETGASSRKVQHAAWP*NSDSLSSILALHQQ
Trigger: CTGCTGATGGAGCGCCAGAATTGAAGATAGAGAGTCTGAATTCAAAGGCCAAGCTGCATGCTGCACTTTACGAGAGGAAGCTCCTGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000555422.5
ENST00000556893.5
ENST00000556976.1
ENST00000557636.5
CDS TCA 72 bp GAATACTGTCTCGCTGCCTGCTTCTCAGCTAGCCGCTaGAGTTCAGCTGTAACCATACTTTGGTTGTACCGT +
Preference number: 6 (lower is better)
Translates to: EYCLAACFSASR*SSAVTILWLYR
Trigger: ACGGTACAACCAAAGTATGGTTACAGCTGAACTTCAGCGGCTAGCTGAGAAGCAGGCAGCGAGACAGTATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS GCA 72 bp AGCTGGTTGGGTAATCACTGGGTATTTTGGCCTCATTaGCCTCAATCTGCTACTCCGTCGTCTACGTTTTCG +
Preference number: 6 (lower is better)
Translates to: SWLGNHWVFWPH*PQSATPSSTFS
Trigger: CGAAAACGTAGACGACGGAGTAGCAGATTGAGGGCAATGAGGCCAAAATACCCAGTGATTACCCAACCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000555422.5
ENST00000556893.5
ENST00000556976.1
ENST00000557636.5
CDS GCA 72 bp TGGATGGCACAGATTCCGGGTAGTGCCAGATCACCATaGGATTCAGAAGAGTGGACAAGGCATAAAAAGCAC +
Preference number: 6 (lower is better)
Translates to: WMAQIPGSARSP*DSEEWTRHKKH
Trigger: GTGCTTTTTATGCCTTGTCCACTCTTCTGAATCGCATGGTGATCTGGCACTACCCGGAATCTGTGCCATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554132.1
CDS CCA 72 bp ATACTGGACGCTGAGGTTTCTGGAAAGGGTTTCGCCTaGAAGACTCAAAGGTGGGATAAATTGGCCGAGTTG +
Preference number: 6 (lower is better)
Translates to: ILDAEVSGKGFA*KTQRWDKLAEL
Trigger: CAACTCGGCCAATTTATCCCACCTTTGAGTCTTCCAGGCGAAACCCTTTCCAGAAACCTCAGCGTCCAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554148.5
ENST00000557636.5
CDS CCA 72 bp TACCAAGAAAAGAGAAGGCCAGCCTCGACCTCGCTGTaGCACATGAGTTATCCTTCAACAGGTGTAGGCATT +
Preference number: 6 (lower is better)
Translates to: YQEKRRPASTSL*HMSYPSTGVGI
Trigger: AATGCCTACACCTGTTGAAGGATAACTCATGTGCCACAGCGAGGTCGAGGCTGGCCTTCTCTTTTCTTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS CCA 72 bp AGACCTTTCCTAGCAGATTCACTGGATCAAGCAATTTaGATGGCACAGATTCCTGGGGAGAGGCTTAGGCAG +
Preference number: 6 (lower is better)
Translates to: RPFLADSLDQAI*MAQIPGERLRQ
Trigger: CTGCCTAAGCCTCTCCCCAGGAATCTGTGCCATCCAAATTGCTTGATCCAGTGAATCTGCTAGGAAAGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555290.5
CDS CAA 72 bp CAGAGCCGTCTGGGAGGGGATTACCAGCCTGATCCCTaGTCTTTAGAGCCAGAAATGACTCAAACTTCACAA +
Preference number: 6 (lower is better)
Translates to: QSRLGGDYQPDP*SLEPEMTQTSQ
Trigger: TTGTGAAGTTTGAGTCATTTCTGGCTCTAAAGACAAGGGATCAGGCTGGTAATCCCCTCCCAGACGGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS TCA 72 bp GGAGGGTTGGGGGAGCTGAAGCACTGCTTCTGTTTATaGTGCCAGTTGCCAAATTCAGGTTTGTTACCTGTT +
Preference number: 6 (lower is better)
Translates to: GGLGELKHCFCL*CQLPNSGLLPV
Trigger: AACAGGTAACAAACCTGAATTTGGCAACTGGCATCATAAACAGAAGCAGTGCTTCAGCTCCCCCAACCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000555018.3
ENST00000556893.5
ENST00000557636.5
CDS GCA 72 bp TCAGGTGGGATCCTGTCCACATTAGGTTATAGTCAGTaGTGCTTGGGTGAACTTCATGAAATCCATGGGCTG +
Preference number: 6 (lower is better)
Translates to: SGGILSTLGYSQ*CLGELHEIHGL
Trigger: CAGCCCATGGATTTCATGAAGTTCACCCAAGCAGCACTGACTATAACCTAATGTGGACAGGATCCCACCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286650.9
ENST00000298832.14
ENST00000555290.5
ENST00000556173.5
ENST00000556977.5
ENST00000557636.5
CDS GCA 72 bp GCCAATCGTCGACTGGGTAATACCATCCTCAGTGAATaGTGGAGGTTATTTGATGCTCGCTTGAGGAAACGA +
Preference number: 6 (lower is better)
Translates to: ANRRLGNTILSE*WRLFDARLRKR
Trigger: TCGTTTCCTCAAGCGAGCATCAAATAACCTCCAGCATTCACTGAGGATGGTATTACCCAGTCGACGATTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000555422.5
ENST00000556893.5
ENST00000557636.5
CDS CCA 72 bp GGATTCTTCTGCGTTCCAGAAGTGCCAATCGTCGACTaGGTAATACCATCCTCAGTGAATGCTGGAGGTTAT +
Preference number: 6 (lower is better)
Translates to: GFFCVPEVPIVD*VIPSSVNAGGY
Trigger: ATAACCTCCAGCATTCACTGAGGATGGTATTACCCAGTCGACGATTGGCACTTCTGGAACGCAGAAGAATCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000555422.5
ENST00000556893.5
ENST00000557636.5
CDS CCA 72 bp GTTTCCTTGTTGTATACAATGATAAAGTCACCCAGCTaGTGGGCCAGGATTCTTCTGCGTTCCAGAAGTGCC +
Preference number: 6 (lower is better)
Translates to: VSLLYTMIKSPS*WARILLRSRSA
Trigger: GGCACTTCTGGAACGCAGAAGAATCCTGGCCCACCAGCTGGGTGACTTTATCATTGTATACAACAAGGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS CCA 72 bp TTATTCATTGTCCATAAATTGGAGTTAGGTAGTGTCTaGCTGCCAAAGATTGCCTGGTGCCGGGCTCGACTC +
Preference number: 6 (lower is better)
Translates to: LFIVHKLELGSV*LPKIAWCRARL
Trigger: GAGTCGAGCCCGGCACCAGGCAATCTTTGGCAGCCAGACACTACCTAACTCCAATTTATGGACAATGAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS CCA 72 bp AGACCTTTCCTAGCAGATTCACTGGATCAAGCAATTTaGATGGCACAGATTCCGGGTAGTGCCAGATCACCA +
Preference number: 6 (lower is better)
Translates to: RPFLADSLDQAI*MAQIPGSARSP
Trigger: TGGTGATCTGGCACTACCCGGAATCTGTGCCATCCAAATTGCTTGATCCAGTGAATCTGCTAGGAAAGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554132.1
CDS CCA 72 bp TGTGTGGGCAAGGGTTTGGATGTGGCGAAAATAACTTaGGGAGTATCCAAAGATCCTGTAGAGCTGGTGATG +
Preference number: 6 (lower is better)
Translates to: CVGKGLDVAKIT*GVSKDPVELVM
Trigger: CATCACCAGCTCTACAGGATCTTTGGATACTCCCCAAGTTATTTTCGCCACATCCAAACCCTTGCCCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554972.1
CDS CCA 72 bp CATTATCTTCACCAGCGAGCATGGAGGAAAAAGGAGTaGCACTGCCTCATCCTCCAAATCCATCCTCTTCAA +
Preference number: 6 (lower is better)
Translates to: HYLHQRAWRKKE*HCLILQIHPLQ
Trigger: TTGAAGAGGATGGATTTGGAGGATGAGGCAGTGCCACTCCTTTTTCCTCCATGCTCGCTGGTGAAGATAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608522.2
CDS CAA 72 bp GCTTCCTCTCGTAAAGTGCAGCATGCAGCTTGGCCTTaGAATTCAGACTCTCTATCTTCAATTCTGGCGCTC +
Preference number: 6 (lower is better)
Translates to: ASSRKVQHAAWP*NSDSLSSILAL
Trigger: GAGCGCCAGAATTGAAGATAGAGAGTCTGAATTCAAAGGCCAAGCTGCATGCTGCACTTTACGAGAGGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000555422.5
ENST00000556893.5
ENST00000556976.1
ENST00000557636.5
CDS CAA 72 bp AGGCTAGATGTTTCATTCTTTGAACTGGGGCTCTCTTaGGAGGCAGAAGAGAGAATGTGCCAAGCCCAACAC +
Preference number: 6 (lower is better)
Translates to: RLDVSFFELGLS*EAEERMCQAQH
Trigger: GTGTTGGGCTTGGCACATTCTCTCTTCTGCCTCCAAAGAGAGCCCCAGTTCAAAGAATGAAACATCTAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557219.1
CDS CAA 90 bp GGTAATACCATCCTCAGTGAATGCTGGAGGTTATTTGATGCTCGCTaGAGGAAACGAACAACCAGCTCCATCTGTTCATCCTCTTTGGCA +
Preference number: 6 (lower is better)
Translates to: GNTILSECWRLFDAR*RKRTTSSICSSSLA
Trigger: TGCCAAAGAGGATGAACAGATGGAGCTGGTTGTTCGTTTCCTCAAGCGAGCATCAAATAACCTCCAGCATTCACTGAGGATGGTATTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000555422.5
ENST00000556893.5
ENST00000557636.5
CDS CAA 90 bp GCACTGGAAATTCTACAACCTGCACCATTATTCATTGTCCATAAATaGGAGTTAGGTAGTGTCTGGCTGCCAAAGATTGCCTGGTGCCGG +
Preference number: 6 (lower is better)
Translates to: ALEILQPAPLFIVHK*ELGSVWLPKIAWCR
Trigger: CCGGCACCAGGCAATCTTTGGCAGCCAGACACTACCTAACTCCAATTTATGGACAATGAATAATGGTGCAGGTTGTAGAATTTCCAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS TCA 72 bp TGGATGCTTCACCCTCAATCATGCACCCAGGAGTGGTaGACAGGTTGTTTCTCTGTGTGTTTGTGGTTCATA +
Preference number: 6 (lower is better)
Translates to: WMLHPQSCTQEW*TGCFSVCLWFI
Trigger: TATGAACCACAAACACACAGAGAAACAACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGAAGCATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298832.14
ENST00000554487.1
ENST00000554972.1
CDS TCA 72 bp GGAGGGTTGGGGGAGCTGAAGCACTGCTTCTGTTTATaGTGCCAGTTGCCAAATTCAGGTTTGTTACCTTTA +
Preference number: 6 (lower is better)
Translates to: GGLGELKHCFCL*CQLPNSGLLPL
Trigger: TAAAGGTAACAAACCTGAATTTGGCAACTGGCATCATAAACAGAAGCAGTGCTTCAGCTCCCCCAACCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608522.2
CDS GCA 72 bp GGTGAACTTCATGAAATCCATGGGCTGTCAGAATGCTaGGTACTAGGCGACTGTCCGTTCGTACAATCTTAT +
Preference number: 6 (lower is better)
Translates to: GELHEIHGLSEC*VLGDCPFVQSY
Trigger: ATAAGATTGTACGAACGGACAGTCGCCTAGTACGCAGCATTCTGACAGCCCATGGATTTCATGAAGTTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286650.9
ENST00000298832.14
ENST00000555290.5
ENST00000556173.5
ENST00000556977.5
ENST00000557636.5
CDS GCA 72 bp AACTTAGGCACATTGAAATTACTGCACGGAACAATGTaGCCTCGCAGGACTCCCGCAAACAGTGCATCATAT +
Preference number: 6 (lower is better)
Translates to: NLGTLKLLHGTM*PRRTPANSASY
Trigger: ATATGATGCACTGTTTGCGGGAGTCCTGCGAGGGCACATTGTTCCGTGCAGTAATTTCAATGTGCCTAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS CCA 72 bp GGCCAAAGAAGGAGAGAGATTCACTTCCAACAACCATaGCTTCAGAGTAGAATCTATGAGCACGTCAAAGCC +
Preference number: 6 (lower is better)
Translates to: GQRRREIHFQQP*LQSRIYEHVKA
Trigger: GGCTTTGACGTGCTCATAGATTCTACTCTGAAGCCATGGTTGTTGGAAGTGAATCTCTCTCCTTCTTTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554148.5
ENST00000554935.5
ENST00000555422.5
ENST00000557636.5
CDS CCA 72 bp TCCTTGTTGTATACAATGATAAAGTCACCCAGCTGGTaGGCCAGGATTCTTCTGCGTTCCAGAAGTGCCAAT +
Preference number: 6 (lower is better)
Translates to: SLLYTMIKSPSW*ARILLRSRSAN
Trigger: ATTGGCACTTCTGGAACGCAGAAGAATCCTGGCCCACCAGCTGGGTGACTTTATCATTGTATACAACAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000556893.5
ENST00000557636.5
CDS CCA 72 bp CCTGGAGAGAGGTCAGAGGTTGTAACAGATGACAAATaGGTGTTGGGAATTTTCTGCAGAGTAGCAGTAGGA +
Preference number: 6 (lower is better)
Translates to: PGERSEVVTDDK*VLGIFCRVAVG
Trigger: TCCTACTGCTACTCTGCAGAAAATTCCCAACACCCATTTGTCATCTGTTACAACCTCTGACCTCTCTCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000555422.5
ENST00000556893.5
ENST00000557636.5
CDS CAA 72 bp GAGACCTTTCCTAGCAGATTCACTGGATCAAGCAATTaGGATGGCACAGATTCCTGTCTCATCTTCCCATGG +
Preference number: 6 (lower is better)
Translates to: ETFPSRFTGSSN*DGTDSCLIFPW
Trigger: CCATGGGAAGATGAGACAGGAATCTGTGCCATCCAAATTGCTTGATCCAGTGAATCTGCTAGGAAAGGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286650.9
ENST00000298832.14
ENST00000556977.5
ENST00000557636.5
CDS CAA 72 bp TACATGGGCCATCAATGCGGTTGTATCTCTGCCTTCTaGTTTCAGGTACCTAAGCATAGCACTCATGCTCCA +
Preference number: 6 (lower is better)
Translates to: YMGHQCGCISAF*FQVPKHSTHAP
Trigger: TGGAGCATGAGTGCTATGCTTAGGTACCTGAAACAAGAAGGCAGAGATACAACCGCATTGATGGCCCATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298832.14
ENST00000554935.5
ENST00000557636.5
CDS CAA 72 bp TGGCACATGAGTTATCCTTCAACAGGTGTAGGCATTTaGAGTCAGAGAGGCCTGGACAATGAAGAGACAGCA +
Preference number: 6 (lower is better)
Translates to: WHMSYPSTGVGI*SQRGLDNEETA
Trigger: TGCTGTCTCTTCATTGTCCAGGCCTCTCTGACTCAAAATGCCTACACCTGTTGAAGGATAACTCATGTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS CAA 72 bp TTGTGTGGGCAAGGGTTTGGATGTGGCGAAAATAACTaGGGGAGTATCCAAAGATCCTGTAGAGCTGGTGAT +
Preference number: 6 (lower is better)
Translates to: LCGQGFGCGENN*GSIQRSCRAGD
Trigger: ATCACCAGCTCTACAGGATCTTTGGATACTCCCCAAGTTATTTTCGCCACATCCAAACCCTTGCCCACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554972.1
CDS CAA 72 bp ACTGTAGCAAGGGCTTCAGATTGTGTGGGCAAGGGTTaGGATGTGGCGAAAATAACTTGGGGAGTATCCAAA +
Preference number: 6 (lower is better)
Translates to: TVARASDCVGKG*DVAKITWGVSK
Trigger: TTTGGATACTCCCCAAGTTATTTTCGCCACATCCAAACCCTTGCCCACACAATCTGAAGCCCTTGCTACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554972.1
CDS CAA 90 bp TGTCCTATAACTGTAGCAAGGGCTTCAGATTGTGTGGGCAAGGGTTaGGATGTGGCGAAAATAACTTGGGGAGTATCCAAAGATCCTGTA +
Preference number: 6 (lower is better)
Translates to: CPITVARASDCVGKG*DVAKITWGVSKDPV
Trigger: TACAGGATCTTTGGATACTCCCCAAGTTATTTTCGCCACATCCAAACCCTTGCCCACACAATCTGAAGCCCTTGCTACAGTTATAGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554972.1
CDS TCA 72 bp AGATGCATGAACTGGTTCCGAATGTTCTTGGCTCCTTaGTCATATCGCACAGTTGCAAACCTAGCCAATCCT +
Preference number: 6 (lower is better)
Translates to: RCMNWFRMFLAP*SYRTVANLANP
Trigger: AGGATTGGCTAGGTTTGCAACTGTGCGATATGATCAAGGAGCCAAGAACATTCGGAACCAGTTCATGCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298832.14
ENST00000557636.5
CDS TCA 72 bp AGATGCATGAACTGGTTCCGAATGTTCTTGGCTCCTTaGTCATATCGCACAGTTGCAAACCTGATAGAAGGG +
Preference number: 6 (lower is better)
Translates to: RCMNWFRMFLAP*SYRTVANLIEG
Trigger: CCCTTCTATCAGGTTTGCAACTGTGCGATATGATCAAGGAGCCAAGAACATTCGGAACCAGTTCATGCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554935.5
CDS GCA 72 bp GGGTGTATATTTGGCTTGATTTTCTCTAAGAAATCCTaGAGACTCCTCCTGGGAAGCCTCCTGTTCTTCATC +
Preference number: 6 (lower is better)
Translates to: GCIFGLIFSKKS*RLLLGSLLFFI
Trigger: GATGAAGAACAGGAGGCTTCCCAGGAGGAGTCTGCAGGATTTCTTAGAGAAAATCAAGCCAAATATACACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000555422.5
ENST00000556893.5
ENST00000557636.5
CDS GCA 72 bp CAGGCGAATTTGAACATGCTGGAGATAGGCAGAGAATaGTATTCGGGCCTGCATTTTGCTAAGATTGCCATT +
Preference number: 6 (lower is better)
Translates to: QANLNMLEIGRE*YSGLHFAKIAI
Trigger: AATGGCAATCTTAGCAAAATGCAGGCCCGAATAGCATTCTCTGCCTATCTCCAGCATGTTCAAATTCGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000555422.5
ENST00000556893.5
ENST00000557636.5
CDS GCA 72 bp TGCCCTCGCAGGACTCCCGCAAACAGTGCATCATATTaGCATGCGTTATGCTTTTGTAAAGCTTTGATAAAG +
Preference number: 6 (lower is better)
Translates to: CPRRTPANSASY*HALCFCKALIK
Trigger: CTTTATCAAAGCTTTACAAAAGCATAACGCATGGCAATATGATGCACTGTTTGCGGGAGTCCTGCGAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS CCA 72 bp AGACCTTTCCTAGCAGATTCACTGGATCAAGCAATTTaGATGGCACAGATTCCTGTCTCATCTTCCCATGGT +
Preference number: 6 (lower is better)
Translates to: RPFLADSLDQAI*MAQIPVSSSHG
Trigger: ACCATGGGAAGATGAGACAGGAATCTGTGCCATCCAAATTGCTTGATCCAGTGAATCTGCTAGGAAAGGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286650.9
ENST00000298832.14
ENST00000556977.5
ENST00000557636.5
CDS CCA 72 bp ACAGGAGCTTCCTCTCGTAAAGTGCAGCATGCAGCTTaGCCTTTGAATTCAGACTCTCTATCTTCAATTCTG +
Preference number: 6 (lower is better)
Translates to: TGASSRKVQHAA*PLNSDSLSSIL
Trigger: CAGAATTGAAGATAGAGAGTCTGAATTCAAAGGCCAAGCTGCATGCTGCACTTTACGAGAGGAAGCTCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000555422.5
ENST00000556893.5
ENST00000556976.1
ENST00000557636.5
CDS CCA 72 bp AACTTGTTGTATACAATGATAAAGTCACCCAGCTGGTaGGCCAGGATTCTTCTGCGTTCCAGAAGTGCCAAT +
Preference number: 6 (lower is better)
Translates to: NLLYTMIKSPSW*ARILLRSRSAN
Trigger: ATTGGCACTTCTGGAACGCAGAAGAATCCTGGCCCACCAGCTGGGTGACTTTATCATTGTATACAACAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555422.5
CDS CAA 90 bp AGGAAATTTCCTTCCCACTTCCCAAATGAGCATTGTTCAGCGAGGTaGTTTGAGTTCAGTTATATGAAACTGCTTCCAGGAGAGCTGGAG +
Preference number: 6 (lower is better)
Translates to: RKFPSHFPNEHCSAR*FEFSYMKLLPGELE
Trigger: CTCCAGCTCTCCTGGAAGCAGTTTCATATAACTGAACTCAAACAACCTCGCTGAACAATGCTCATTTGGGAAGTGGGAAGGAAATTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555018.3
ENST00000608522.2
CDS CAA 90 bp GTAGTTTGTCAGATGCATGAACTGGTTCCGAATGTTCTTGGCTCCTaGATCATATCGCACAGTTGCAAACCTGATAGAAGGGAAACAGGT +
Preference number: 6 (lower is better)
Translates to: VVCQMHELVPNVLGS*IISHSCKPDRRETG
Trigger: ACCTGTTTCCCTTCTATCAGGTTTGCAACTGTGCGATATGATCAAGGAGCCAAGAACATTCGGAACCAGTTCATGCATCTGACAAACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554935.5
CDS GCA 72 bp GTTGTAACAGATGACAAATGGGTGTTGGGAATTTTCTaGAGAGTAGCAGTAGGACCAGAGGAGGAATTGCTA +
Preference number: 6 (lower is better)
Translates to: VVTDDKWVLGIF*RVAVGPEEELL
Trigger: TAGCAATTCCTCCTCTGGTCCTACTGCTACTCTGCAGAAAATTCCCAACACCCATTTGTCATCTGTTACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000555422.5
ENST00000556893.5
ENST00000557636.5
CDS CAA 72 bp TCACCCTCAATCATGCACCCAGGAGTGGTGAACAGGTaGTTTCTCTGTGTGTTTGTGGTTCATATTTTAGTG +
Preference number: 6 (lower is better)
Translates to: SPSIMHPGVVNR*FLCVFVVHILV
Trigger: CACTAAAATATGAACCACAAACACACAGAGAAACAACCTGTTCACCACTCCTGGGTGCATGATTGAGGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298832.14
ENST00000554487.1
ENST00000554972.1
CDS CAA 72 bp CCTTCCCACTTCCCAAATGAGCATTGTTCAGCGAGGTaGTTTGAGTTCAGTTATATGAAACTGCTTCCAGGA +
Preference number: 6 (lower is better)
Translates to: PSHFPNEHCSAR*FEFSYMKLLPG
Trigger: TCCTGGAAGCAGTTTCATATAACTGAACTCAAACAACCTCGCTGAACAATGCTCATTTGGGAAGTGGGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555018.3
ENST00000608522.2
CDS CAA 72 bp TTTTCTCTGTCCTATAACTGTAGCAAGGGCTTCAGATaGTGTGGGCAAGGGTTTGGATGTGGCGAAAATAAC +
Preference number: 6 (lower is better)
Translates to: FSLSYNCSKGFR*CGQGFGCGENN
Trigger: GTTATTTTCGCCACATCCAAACCCTTGCCCACACAATCTGAAGCCCTTGCTACAGTTATAGGACAGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554972.1
CDS TCA 72 bp TGCAGATCTGGAGATGCTACAGACTATCGACATAGTTaGACAGACTCTGAGGGTTACAACAAAGCAAGTGAA +
Preference number: 6 (lower is better)
Translates to: CRSGDATDYRHS*TDSEGYNKASE
Trigger: TTCACTTGCTTTGTTGTAACCCTCAGAGTCTGTTCAACTATGTCGATAGTCTGTAGCATCTCCAGATCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS GCA 72 bp TCACAAAAAGCTGCACCCAAATACCAGGGGGACAATTaGAACACTTCTTCAATACTATACCCACACATGAGA +
Preference number: 6 (lower is better)
Translates to: SQKAAPKYQGDN*NTSSILYPHMR
Trigger: TCTCATGTGTGGGTATAGTATTGAAGAAGTGTTGCAATTGTCCCCCTGGTATTTGGGTGCAGCTTTTTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS CCA 72 bp CTAATATTGTTGTCCTTTGTAAGAATAGCGTCGGCATaGAATACCAAAACTGGAATTCTCCTGCAGCCTCCA +
Preference number: 6 (lower is better)
Translates to: LILLSFVRIASA*NTKTGILLQPP
Trigger: TGGAGGCTGCAGGAGAATTCCAGTTTTGGTATTCCATGCCGACGCTATTCTTACAAAGGACAACAATATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286650.9
ENST00000298832.14
ENST00000555290.5
ENST00000556173.5
ENST00000556685.1
ENST00000556977.5
ENST00000557636.5
CDS CAA 72 bp ATCACAAAAAGCTGCACCCAAATACCAGGGGGACAATaGCAACACTTCTTCAATACTATACCCACACATGAG +
Preference number: 6 (lower is better)
Translates to: ITKSCTQIPGGQ*QHFFNTIPTHE
Trigger: CTCATGTGTGGGTATAGTATTGAAGAAGTGTTGCAATTGTCCCCCTGGTATTTGGGTGCAGCTTTTTGTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS CAA 72 bp GAGACCTTTCCTAGCAGATTCACTGGATCAAGCAATTaGGATGGCACAGATTCTTGTAGGTTTTGGACCTAT +
Preference number: 6 (lower is better)
Translates to: ETFPSRFTGSSN*DGTDSCRFWTY
Trigger: ATAGGTCCAAAACCTACAAGAATCTGTGCCATCCAAATTGCTTGATCCAGTGAATCTGCTAGGAAAGGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556265.5
CDS TCA 72 bp AGAATCTGCATCAGGTTAAATTTAGGCTCTAGCTCCTaGGTCTCAAGTTTGCAGCAGTGTCCACCTTTATTA +
Preference number: 6 (lower is better)
Translates to: RICIRLNLGSSS*VSSLQQCPPLL
Trigger: TAATAAAGGTGGACACTGCTGCAAACTTGAGACTCAGGAGCTAGAGCCTAAATTTAACCTGATGCAGATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000555422.5
ENST00000556893.5
ENST00000557636.5
CDS CCA 72 bp ACTCATGCTCCATTTGTTTCCATAATCCTCCACTTCTaGATCGTCACAACTGACGTAATCTCCACTTTTCTT +
Preference number: 6 (lower is better)
Translates to: THAPFVSIILHF*IVTTDVISTFL
Trigger: AAGAAAAGTGGAGATTACGTCAGTTGTGACGATCCAGAAGTGGAGGATTATGGAAACAAATGGAGCATGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298832.14
ENST00000554935.5
ENST00000557636.5
CDS CCA 72 bp TTCACTCTCTGTCTCAGTTTTAACATTCATTTCAGCTaGTTGGGTAATCACTGGGTATTTTGGCCTCATTGC +
Preference number: 6 (lower is better)
Translates to: FTLCLSFNIHFS*LGNHWVFWPHC
Trigger: GCAATGAGGCCAAAATACCCAGTGATTACCCAACCAGCTGAAATGAATGTTAAAACTGAGACAGAGAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000555422.5
ENST00000556893.5
ENST00000556976.1
ENST00000557636.5
CDS CCA 72 bp TCTTGCTCAGTAGTAATCCACTGTATAGATGTACCATaGTTATCCATTCACCAGTTGAAGGCATTTGGATTG +
Preference number: 6 (lower is better)
Translates to: SCSVVIHCIDVP*LSIHQLKAFGL
Trigger: CAATCCAAATGCCTTCAACTGGTGAATGGATAACCATGGTACATCTATACAGTGGATTACTACTGAGCAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554185.1
CDS TCA 72 bp AGCAAAACATATTGCTATGATGTCCTTGAGAAACAGTaGAGCACAACCTCCATCTCTTTTCTCTATTCCCAA +
Preference number: 6 (lower is better)
Translates to: SKTYCYDVLEKQ*STTSISFLYSQ
Trigger: TTGGGAATAGAGAAAAGAGATGGAGGTTGTGCTTCACTGTTTCTCAAGGACATCATAGCAATATGTTTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS GCA 72 bp TCATTGTTGCATGTATCAGTATTCTGTCCCTTTTCTTaGTCAGTAGTAATCCACTGTATAGATGTACCATGG +
Preference number: 6 (lower is better)
Translates to: SLLHVSVFCPFS*SVVIHCIDVPW
Trigger: CCATGGTACATCTATACAGTGGATTACTACTGAGCAAGAAAAGGGACAGAATACTGATACATGCAACAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554185.1
CDS TCA 72 bp TCTGCTGAAGTGGTAAATCGAGATAATTTATCAGAATaGATTTCTGTCGTCTGTTGCTGTTTAGGTGGCTTT +
Preference number: 6 (lower is better)
Translates to: SAEVVNRDNLSE*ISVVCCCLGGF
Trigger: AAAGCCACCTAAACAGCAACAGACGACAGAAATTCATTCTGATAAATTATCTCGATTTACCACTTCAGCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000555422.5
ENST00000556893.5
ENST00000557636.5
CDS CAA 90 bp GGTCAGAGTCACAGGCATTCTAGATGTAGAAGCTTAACATCCTCTTaGGTAGTTATATTTTCTGACAAACATTCACTACAAATGTACCAA +
Preference number: 6 (lower is better)
Translates to: GQSHRHSRCRSLTSS*VVIFSDKHSLQMYQ
Trigger: TTGGTACATTTGTAGTGAATGTTTGTCAGAAAATATAACTACCAAAGAGGATGTTAAGCTTCTACATCTAGAATGCCTGTGACTCTGACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS CAA 90 bp TGTCCACCTTTATTATTCCATTCACGAACTTTCATGGAATTTTCTTaGGGTGTATTTTCTACCAAAGCTGTCAATGAGGGTGTATATTTG +
Preference number: 6 (lower is better)
Translates to: CPPLLFHSRTFMEFS*GVFSTKAVNEGVYL
Trigger: CAAATATACACCCTCATTGACAGCTTTGGTAGAAAATACACCCAAAGAAAATTCCATGAAAGTTCGTGAATGGAATAATAAAGGTGGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000555422.5
ENST00000556893.5
ENST00000557636.5
CDS CAA 90 bp CTGTCTTGTGAAATGAATTTAATCTTTCTGTCGCCTAGTATTAATTaGAGGTCCAAAACAGAAGTGATAGGGTGTAAGGGAATTCATTTC +
Preference number: 6 (lower is better)
Translates to: LSCEMNLIFLSPSIN*RSKTEVIGCKGIHF
Trigger: GAAATGAATTCCCTTACACCCTATCACTTCTGTTTTGGACCTCAAATTAATACTAGGCGACAGAAAGATTAAATTCATTTCACAAGACAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS CAA 90 bp TTGAAATGTATCATTGTTGCATGTATCAGTATTCTGTCCCTTTTCTaGCTCAGTAGTAATCCACTGTATAGATGTACCATGGTTATCCAT +
Preference number: 6 (lower is better)
Translates to: LKCIIVACISILSLF*LSSNPLYRCTMVIH
Trigger: ATGGATAACCATGGTACATCTATACAGTGGATTACTACTGAGCAAGAAAAGGGACAGAATACTGATACATGCAACAATGATACATTTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554185.1
CDS CAA 90 bp TTTTCCAGAAAGTCAAATAAGTGGAATCAGACAGTGTGTATCCTTTaGAGACTAGCTTCTTTCACTGAGCACAACTCATTTGAAATGTAT +
Preference number: 6 (lower is better)
Translates to: FSRKSNKWNQTVCIL*RLASFTEHNSFEMY
Trigger: ATACATTTCAAATGAGTTGTGCTCAGTGAAAGAAGCTAGTCTCAAAAGGATACACACTGTCTGATTCCACTTATTTGACTTTCTGGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554185.1
CDS GCA 72 bp ACTCCCGCAAACAGTGCATCATATTGCCATGCGTTATaGTTTTGTAAAGCTTTGATAAAGCTTTTATATTCA +
Preference number: 6 (lower is better)
Translates to: TPANSASYCHAL*FCKALIKLLYS
Trigger: TGAATATAAAAGCTTTATCAAAGCTTTACAAAAGCATAACGCATGGCAATATGATGCACTGTTTGCGGGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS CAA 72 bp GAAATGAATTTAATCTTTCTGTCGCCTAGTATTAATTaGAGGTCCAAAACAGAAGTGATAGGGTGTAAGGGA +
Preference number: 6 (lower is better)
Translates to: EMNLIFLSPSIN*RSKTEVIGCKG
Trigger: TCCCTTACACCCTATCACTTCTGTTTTGGACCTCAAATTAATACTAGGCGACAGAAAGATTAAATTCATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556173.5
CDS CAA 72 bp TTATTATTCCATTCACGAACTTTCATGGAATTTTCTTaGGGTGTATTTTCTACCAAAGCTGTCAATGAGGGT +
Preference number: 6 (lower is better)
Translates to: LLFHSRTFMEFS*GVFSTKAVNEG
Trigger: ACCCTCATTGACAGCTTTGGTAGAAAATACACCCAAAGAAAATTCCATGAAAGTTCGTGAATGGAATAATAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298832.14
ENST00000554510.5
ENST00000555422.5
ENST00000556893.5
ENST00000557636.5
CDS CAA 72 bp CACAGGCATTCTAGATGTAGAAGCTTAACATCCTCTTaGGTAGTTATATTTTCTGACAAACATTCACTACAA +
Preference number: 6 (lower is better)
Translates to: HRHSRCRSLTSS*VVIFSDKHSLQ
Trigger: TTGTAGTGAATGTTTGTCAGAAAATATAACTACCAAAGAGGATGTTAAGCTTCTACATCTAGAATGCCTGTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556173.5