RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTLL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000214021

Ensembl transcript IDs: ENST00000310252.11, ENST00000383827.5, ENST00000414814.5, ENST00000417065.5, ENST00000418745.5, ENST00000419081.5, ENST00000422738.5, ENST00000426827.5, ENST00000426895.9, ENST00000427220.5, ENST00000430390.5, ENST00000430718.5, ENST00000430793.1, ENST00000431204.5, ENST00000438141.5, ENST00000438596.5, ENST00000439814.5, ENST00000443148.5, ENST00000452597.5, ENST00000452823.5, ENST00000455274.5, ENST00000459758.5, ENST00000466245.1, ENST00000473661.5, ENST00000474948.5, ENST00000482269.1, ENST00000483051.5, ENST00000492440.1, ENST00000493241.1, ENST00000496246.5, ENST00000496526.5, ENST00000602338.1

Found 1425 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCTCGCTGCACGGAGGAGCTGCTGATGGCCTCAGGCTCTTGCTGTaGACCCTGGGGTACACGGCCTCGCCCCATCCACTCTTGACCCTC +
Preference number: 1 (lower is better)
Translates to: ASLHGGAADGLRLLL*TLGYTASPHPLLTL
Trigger: GAGGGTCAAGAGTGGATGGGGCGAGGCCGTGTACCCCAGGGTCCACAGCAAGAGCCTGAGGCCATCAGCAGCTCCTCCGTGCAGCGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383827.5
3UTR GCA 90 bp TTGCGGTCCAGCATCCGGTCAATGACCACGCGCAGGGTGTCAGCTTaGACGCCAGCACAGAGCCGGGCAGTGACTGCTGTGGAGGGTGCC +
Preference number: 1 (lower is better)
Translates to: LRSSIRSMTTRRVSA*TPAQSRAVTAVEGA
Trigger: GGCACCCTCCACAGCAGTCACTGCCCGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCGCGTGGTCATTGACCGGATGCTGGACCGCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
3UTR TCA 90 bp CCACTTGGTAGTAGCGCTGGAGGAAGAGGGACCAGCCCTCGGGGGTaGGGTACAGCGGGGCCTCCAGGTCCTTGTCGATGTCCATGTGGG +
Preference number: 1 (lower is better)
Translates to: PLGSSAGGRGTSPRG*GTAGPPGPCRCPCG
Trigger: CCCACATGGACATCGACAAGGACCTGGAGGCCCCGCTGTACCTCACCCCCGAGGGCTGGTCCCTCTTCCTCCAGCGCTACTACCAAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427220.5
3UTR TCA 90 bp CGCTGGGTCAGCAGAGGGACTGCTGGGCGGACCCCCATCCGCCGATaGCACATCGCCATGGGCTTCTTGATGGTGAAGCCCTCTACCAGG +
Preference number: 1 (lower is better)
Translates to: RWVSRGTAGRTPIRR*HIAMGFLMVKPSTR
Trigger: CCTGGTAGAGGGCTTCACCATCAAGAAGCCCATGGCGATGTGTCATCGGCGGATGGGGGTCCGCCCAGCAGTCCCTCTGCTGACCCAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473661.5
3UTR GCA 90 bp GCGCAGGGTGTCAGCTTGCACGCCAGCACAGAGCCGGGCAGTGACTaGTGTGGAGGGTGCCATCGTGGGGCTGGCGTTGATCTCAATCAG +
Preference number: 1 (lower is better)
Translates to: AQGVSLHASTEPGSD*CGGCHRGAGVDLNQ
Trigger: CTGATTGAGATCAACGCCAGCCCCACGATGGCACCCTCCACAGCAGTCACTGCCCGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
3UTR TCA 90 bp ACCACGGCCTGCAGCTGCTGCAGGATGTCCTCACAGCGCTGGACCTaGGTGTCGAGGTGCCTGAGTTCTGCCCCTTCGTGGACCACTTGG +
Preference number: 1 (lower is better)
Translates to: TTACSCCRMSSQRWT*VSRCLSSAPSWTTW
Trigger: CCAAGTGGTCCACGAAGGGGCAGAACTCAGGCACCTCGACACTCAGGTCCAGCGCTGTGAGGACATCCTGCAGCAGCTGCAGGCCGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427220.5
3UTR TCA 90 bp GCTCAAAGGCTCCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATaGCCACGCGCAGGGTGTCAGCTTGCACGCCAGCACAGAGCCGGG +
Preference number: 1 (lower is better)
Translates to: AQRLLCHSCGPASGQ*PRAGCQLARQHRAG
Trigger: CCCGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCGCGTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCCTTTGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
3UTR GCA 90 bp CACCAGCTTGAGAACGTTGCGGGCAGCAGTCAGCCAGAAGTCCTCTaGTCCCAGGCCAGGGGATACCCTGCTCAGCCCCTAGGCTTGAGG +
Preference number: 1 (lower is better)
Translates to: HQLENVAGSSQPEVL*SQARGYPAQPLGLR
Trigger: CCTCAAGCCTAGGGGCTGAGCAGGGTATCCCCTGGCCTGGGAGCAGAGGACTTCTGGCTGACTGCTGCCCGCAACGTTCTCAAGCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
3UTR GCA 90 bp GCCTTGCCTGTGGTCGACAGGGCCTTAGTGCCCACCAGCTTGCTGTaGTGTCGTCTGAGGACCTGGCCCTGGTGTCGGAGTACATGGGGA +
Preference number: 1 (lower is better)
Translates to: ALPVVDRALVPTSLL*CRLRTWPWCRSTWG
Trigger: TCCCCATGTACTCCGACACCAGGGCCAGGTCCTCAGACGACAGCACAGCAAGCTGGTGGGCACTAAGGCCCTGTCGACCACAGGCAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
3UTR GCA 90 bp CTCCAGTGTAGCCCGCACCTCCCAGGCTCTCCGTCGCCTCCCAGTTaGCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCC +
Preference number: 1 (lower is better)
Translates to: LQCSPHLPGSPSPPS*LSAQPPLFWRVCLA
Trigger: GGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAACTGGGAGGCGACGGAGAGCCTGGGAGGTGCGGGCTACACTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455274.5
3UTR GCA 90 bp CCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACCCATCTCCTaGAGGTGGGCCTGGAACCTCTGGCTAGACCACATGTTGTCTGGC +
Preference number: 1 (lower is better)
Translates to: PGTMMVDQAFGAPIS*RWAWNLWLDHMLSG
Trigger: GCCAGACAACATGTGGTCTAGCCAGAGGTTCCAGGCCCACCTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
3UTR CCA 90 bp TGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTTGTTCTCTGGGGTTaGGGGGCTCCCAGTGCTCGGCAGTTCTGGCAATATGTCCCTGCG +
Preference number: 1 (lower is better)
Translates to: CPVGVILLAWLVLWG*GAPSARQFWQYVPA
Trigger: CGCAGGGACATATTGCCAGAACTGCCGAGCACTGGGAGCCCCCCAACCCCAGAGAACAAGCCAAGCTAGCAGAATGACACCTACCGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
3UTR CCA 90 bp GGGGTGAGGTACAGCGGGGCCTCCAGGTCCTTGTCGATGTCCATGTaGGCCAAGTTGCTAAGGTACTCCTCGCACGCACACAGAGCTTCA +
Preference number: 1 (lower is better)
Translates to: GVRYSGASRSLSMSM*AKLLRYSSHAHRAS
Trigger: TGAAGCTCTGTGTGCGTGCGAGGAGTACCTTAGCAACTTGGCCCACATGGACATCGACAAGGACCTGGAGGCCCCGCTGTACCTCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427220.5
3UTR CCA 90 bp CCTGGCTTCACGATCCAGATGTTGCGATCCCCTTCCATGTCTATCTaGGGTACCACGGCCTGCAGCTGCTGCAGGATGTCCTCACAGCGC +
Preference number: 1 (lower is better)
Translates to: PGFTIQMLRSPSMSI*GTTACSCCRMSSQR
Trigger: GCGCTGTGAGGACATCCTGCAGCAGCTGCAGGCCGTGGTACCCCAGATAGACATGGAAGGGGATCGCAACATCTGGATCGTGAAGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427220.5
3UTR CCA 90 bp CACAGCATCCTTCATGCCAGGCACGATGATGGTGGACCAAGCATTTaGGGCACCCATCTCCTGCAGGTGGGCCTGGAACCTCTGGCTAGA +
Preference number: 1 (lower is better)
Translates to: HSILHARHDDGGPSI*GTHLLQVGLEPLAR
Trigger: TCTAGCCAGAGGTTCCAGGCCCACCTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCATGAAGGATGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
3UTR TCA 90 bp AGGTCTGAAGTGCGTGGATCACAGCATCCTTCATGCCAGGCACGATaGTGGTGGACCAAGCATTTGGGGCACCCATCTCCTGCAGGTGGG +
Preference number: 1 (lower is better)
Translates to: RSEVRGSQHPSCQAR*WWTKHLGHPSPAGG
Trigger: CCCACCTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCATGAAGGATGCTGTGATCCACGCACTTCAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
3UTR GCA 90 bp AAAGCTGGCCTTCCGACACTGCACGGTGTCCTGGGAGGTCTGAAGTaGGTGGATCACAGCATCCTTCATGCCAGGCACGATGATGGTGGA +
Preference number: 1 (lower is better)
Translates to: KAGLPTLHGVLGGLK*VDHSILHARHDDGG
Trigger: TCCACCATCATCGTGCCTGGCATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
3UTR CCA 90 bp GCACTGTCCACTGGGTGTGAGTCACAGGTCGAGGCCCACCTTTCTTaGCTTCAGGATGCTGGGTGCCACCTTGAAATCAAGGTTCGGTGG +
Preference number: 1 (lower is better)
Translates to: ALSTGCESQVEAHLS*LQDAGCHLEIKVRW
Trigger: CCACCGAACCTTGATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTCGACCTGTGACTCACACCCAGTGGACAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
3UTR GCA 90 bp CCCAGTGCTCGGCAGTTCTGGCAATATGTCCCTGCGTCGACTCACTaGCACGTGATCTTGGGTAAGCCATGCCTCCTCTTTCAGACTCAG +
Preference number: 1 (lower is better)
Translates to: PSARQFWQYVPASTH*HVILGKPCLLFQTQ
Trigger: CTGAGTCTGAAAGAGGAGGCATGGCTTACCCAAGATCACGTGGCAGTGAGTCGACGCAGGGACATATTGCCAGAACTGCCGAGCACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
3UTR CCA 90 bp TCTCCGTCGCCTCCCAGTTGCCTTTCAGCACAACCTCCACTGTTCTaGAGAGTGTGCTTAGCCTTGGACTTCTCCGAGCTCTGTTGCACA +
Preference number: 1 (lower is better)
Translates to: SPSPPSCLSAQPPLF*RVCLALDFSELCCT
Trigger: TGTGCAACAGAGCTCGGAGAAGTCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAACTGGGAGGCGACGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455274.5
3UTR GCA 90 bp GAGTCACAGGTCGAGGCCCACCTTTCTTGGCTTCAGGATGCTGGGTaGCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTT +
Preference number: 1 (lower is better)
Translates to: ESQVEAHLSWLQDAG*HLEIKVRWEGNEDL
Trigger: AAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTCGACCTGTGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
3UTR GCA 90 bp GATGCCGATGGCATGAGTTCTCCAGGTGCTTCTGGATGGAGTTGTTaGACAGGTGCACTGAGTTGTCCAGGTTCTTCAGGGAGAAGGGCT +
Preference number: 1 (lower is better)
Translates to: DADGMSSPGASGWSC*TGALSCPGSSGRRA
Trigger: AGCCCTTCTCCCTGAAGAACCTGGACAACTCAGTGCACCTGTGCAACAACTCCATCCAGAAGCACCTGGAGAACTCATGCCATCGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000431204.5
3UTR CAA 90 bp TTCTGGGCCTCGCTGCACGGAGGAGCTGCTGATGGCCTCAGGCTCTaGCTGTGGACCCTGGGGTACACGGCCTCGCCCCATCCACTCTTG +
Preference number: 2 (lower is better)
Translates to: FWASLHGGAADGLRL*LWTLGYTASPHPLL
Trigger: CAAGAGTGGATGGGGCGAGGCCGTGTACCCCAGGGTCCACAGCAAGAGCCTGAGGCCATCAGCAGCTCCTCCGTGCAGCGAGGCCCAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383827.5
3UTR CAA 90 bp GTTGCGGTCCAGCATCCGGTCAATGACCACGCGCAGGGTGTCAGCTaGCACGCCAGCACAGAGCCGGGCAGTGACTGCTGTGGAGGGTGC +
Preference number: 2 (lower is better)
Translates to: VAVQHPVNDHAQGVS*HASTEPGSDCCGGC
Trigger: GCACCCTCCACAGCAGTCACTGCCCGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCGCGTGGTCATTGACCGGATGCTGGACCGCAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
3UTR-3UTR CCA 90 bp TCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGGGGTGCCAGCCAGCCTaGGAGCTGCCCTCTGCCTGT +
Preference number: 2 (lower is better)
Translates to: SDFKGQRQQGTSSWGPRRGCQPA*ELPSAC
Trigger: ACAGGCAGAGGGCAGCTCCCAGGCTGGCTGGCACCC...CCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000473661.5
3UTR-3UTR CCA 90 bp ATGACCACGCGCAGGGTGTCAGCTTGCACGCCAGCACAGAGCCGGGCAGTGACTCAAGGCACTTCCAGCTaGGGGCCTCGGAGGCACAGG +
Preference number: 2 (lower is better)
Translates to: MTTRRVSACTPAQSRAVTQGTSS*GPRRHR
Trigger: CCTGTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTG...AGTCACTGCCCGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCGCGTGGTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
3UTR-3UTR TCA 90 bp TCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGAGGCTGGGGAAGTGGTaGCGGGCTGGGTCTGCATCC +
Preference number: 2 (lower is better)
Translates to: SDFKGQRQQGTSSWGPRRRLGKW*RAGSAS
Trigger: GGATGCAGACCCAGCCCGTCACCACTTCCCCAGCCT...CCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473661.5
3UTR-3UTR GCA 90 bp ATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACCCATCTCCTGCAGGGCTGCCCTCTGCCTGTaGCCTCCAGCCCTGACCCCG +
Preference number: 2 (lower is better)
Translates to: MPGTMMVDQAFGAPISCRAALCL*PPALTP
Trigger: CGGGGTCAGGGCTGGAGGGCACAGGCAGAGGGCAGC...CCTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
3UTR-3UTR CCA 90 bp GAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTCTTGTTCTCTGGGGTTaGGGGGCTCCCAGTGCTCGG +
Preference number: 2 (lower is better)
Translates to: EEGASEGDQLFPWGASQPLVLWG*GAPSAR
Trigger: CCGAGCACTGGGAGCCCCCCAACCCCAGAGAACAAG...AGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000383827.5
3UTR-3UTR CCA 90 bp AAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGATGGGGAGAAGGCAGCTaGGCCTTGGTGTGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: KGLLRETSSSLGVPASLGWGEGS*ALVWRL
Trigger: CAGCCTCCACACCAAGGCCCAGCTGCCTTCTCCCCA...TCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
3UTR-3UTR TCA 90 bp AAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGACGACTCACTGCCACGTaGTCTTGGGTAAGCCATGCC +
Preference number: 2 (lower is better)
Translates to: KGLLRETSSSLGVPASLGRLTAT*SWVSHA
Trigger: GGCATGGCTTACCCAAGATCACGTGGCAGTGAGTCG...TCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383827.5
3UTR-3UTR TCA 90 bp ACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCATACCAGCCCTCGGGGGTaGGGTACAGCGGGGCCTCCA +
Preference number: 2 (lower is better)
Translates to: TLHGVLGGLKCVDHSILHTSPRG*GTAGPP
Trigger: TGGAGGCCCCGCTGTACCTCACCCCCGAGGGCTGGT...ATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427220.5
3UTR-3UTR GCA 90 bp GTTGGATCCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCCTAGCTTCCCAGCCCTGACCCCGTaGTCAGCACTGTCCACTGGG +
Preference number: 2 (lower is better)
Translates to: VGSRTRAVGNRSRGFPSFPALTP*SALSTG
Trigger: CCCAGTGGACAGTGCTGAGCACGGGGTCAGGGCTGG...GAAGCTAGGGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
3UTR-3UTR GCA 90 bp ACCACCAGCTTGAGAACGTTGCGGGCAGCAGTCAGCCAGAAGTCCTCTGCTCCCGGCCAGGGGATACCCTaGTCAGCCCCTAGGCTTGAG +
Preference number: 2 (lower is better)
Translates to: TTSLRTLRAAVSQKSSAPGQGIP*SAPRLE
Trigger: CTCAAGCCTAGGGGCTGAGCAGGGTATCCCCTGGCC...GGGAGCAGAGGACTTCTGGCTGACTGCTGCCCGCAACGTTCTCAAGCTGGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
3UTR-3UTR GCA 90 bp GTTGGATCCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCCTAGCTTCGGGGCACCCATCTCCTaGAGGTGGGCCTGGAACCTC +
Preference number: 2 (lower is better)
Translates to: VGSRTRAVGNRSRGFPSFGAPIS*RWAWNL
Trigger: GAGGTTCCAGGCCCACCTGCAGGAGATGGGTGCCCC...GAAGCTAGGGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
3UTR-3UTR CCA 90 bp CCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCGAGGCCCACCTTTCTTaGCTTCAGGATGCTGGGTGC +
Preference number: 2 (lower is better)
Translates to: PTSKGRGNKALPAGGLGGEAHLS*LQDAGC
Trigger: GCACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTC...GCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
3UTR-3UTR CCA 90 bp CGTGCTCAGCACTGTCCACTGGGTGTGAGTCACAGGTCGAGGCCCACCTTTCTTGACCAGCTCTTCCCTTaGGGTGCCAGCCAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: RAQHCPLGVSHRSRPTFLDQLFP*GASQPG
Trigger: CCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTC...AAGAAAGGTGGGCCTCGACCTGTGACTCACACCCAGTGGACAGTGCTGAGCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
3UTR-3UTR CCA 90 bp TGCGATCCCCTTCCATGTCTATCTGGGGTACCACGGCCTGCAGCTGCTGCAGGAGGCAGGCCTCAGCCCTaGGTTTGTCACAGTCTGGCC +
Preference number: 2 (lower is better)
Translates to: CDPLPCLSGVPRPAAAAGGRPQP*VCHSLA
Trigger: GGCCAGACTGTGACAAACCCAGGGCTGAGGCCTGCC...TCCTGCAGCAGCTGCAGGCCGTGGTACCCCAGATAGACATGGAAGGGGATCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000430390.5
3UTR-3UTR CCA 90 bp TCCCTAGCTTCATATCCCCCAGGCCCCTGCGCCTCTGGAATGTACCAACAAGGGGGCTCAGCCTCTTCATaGGGCAGGCCTCAGCCCTGG +
Preference number: 2 (lower is better)
Translates to: SLASYPPGPCASGMYQQGGSASS*GRPQPW
Trigger: CCAGGGCTGAGGCCTGCCCCATGAAGAGGCTGAGCC...CCCTTGTTGGTACATTCCAGAGGCGCAGGGGCCTGGGGGATATGAAGCTAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000473661.5
3UTR-3UTR TCA 90 bp GTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGTGCTGGGTGCCACCTTaGAATCAAGGTTCGGTGGGA +
Preference number: 2 (lower is better)
Translates to: VEEGASEGDQLFPWGASQCWVPP*NQGSVG
Trigger: TCCCACCGAACCTTGATTTCAAGGTGGCACCCAGCA...CTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
3UTR-3UTR TCA 90 bp CTCAAAGCTGGCCTTCCGACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGACTGTCCACTGGGTGTaGGTCACAGGTCGAGGCCCA +
Preference number: 2 (lower is better)
Translates to: LKAGLPTLHGVLGGLKCVTVHWV*VTGRGP
Trigger: TGGGCCTCGACCTGTGACTCACACCCAGTGGACAGT...CACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAGCTTTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
3UTR-3UTR GCA 90 bp GGGAGGGAAATGAAGACCTTAGCCGTGGGTAGAGTCCTCAAGGCCTTGCCTGTGGCTCTTCCCTTGGGGTaGCAGCCAGCCTGGGAGCTG +
Preference number: 2 (lower is better)
Translates to: GREMKTLAVGRVLKALPVALPLG*QPAWEL
Trigger: CAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGC...CACAGGCAAGGCCTTGAGGACTCTACCCACGGCTAAGGTCTTCATTTCCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
3UTR-3UTR GCA 90 bp GTTGGATCCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCCTAGCTTCGAGCCGGGCAGTGACTaGTGTGGAGGGTGCCATCGT +
Preference number: 2 (lower is better)
Translates to: VGSRTRAVGNRSRGFPSFEPGSD*CGGCHR
Trigger: ACGATGGCACCCTCCACAGCAGTCACTGCCCGGCTC...GAAGCTAGGGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
3UTR-3UTR CCA 90 bp GAGCTCAAAGGCTCCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACGACCAGCTCTTCCCTTaGGGTGCCAGCCAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: ELKGSCVTVAVQHPVNDHDQLFP*GASQPG
Trigger: CCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTC...GTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCCTTTGAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
3UTR-3UTR CCA 90 bp GGCTCCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACGCGCAGGGTCCTTCCATGTCTATCTaGGGTACCACGGCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: GSCVTVAVQHPVNDHAQGPSMSI*GTTACS
Trigger: GCTGCAGGCCGTGGTACCCCAGATAGACATGGAAGG...ACCCTGCGCGTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000430390.5
3UTR CAA 90 bp CCCATCTCCTGCAGGTGGGCCTGGAACCTCTGGCTAGACCACATGTaGTCTGGCGGAAGCAGTGGATGCCGATGGCATGAGTTCTCCAGG +
Preference number: 2 (lower is better)
Translates to: PISCRWAWNLWLDHM*SGGSSGCRWHEFSR
Trigger: CCTGGAGAACTCATGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCAGAGGTTCCAGGCCCACCTGCAGGAGATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
3UTR CAA 90 bp GGGAGGGAAATGAAGACCTTAGCCGTGGGTAGAGTCCTCAAGGCCTaGCCTGTGGTCGACAGGGCCTTAGTGCCCACCAGCTTGCTGTGC +
Preference number: 2 (lower is better)
Translates to: GREMKTLAVGRVLKA*PVVDRALVPTSLLC
Trigger: GCACAGCAAGCTGGTGGGCACTAAGGCCCTGTCGACCACAGGCAAGGCCTTGAGGACTCTACCCACGGCTAAGGTCTTCATTTCCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
3UTR-3UTR TCA 90 bp GGGAGGGAAATGAAGACCTTAGCCGTGGGTAGAGTCCTCAAGGCCTTGCCTGTGCCAGCATCCGGTCAATaGCCACGCGCAGGGTGTCAG +
Preference number: 2 (lower is better)
Translates to: GREMKTLAVGRVLKALPVPASGQ*PRAGCQ
Trigger: CTGACACCCTGCGCGTGGTCATTGACCGGATGCTGG...CACAGGCAAGGCCTTGAGGACTCTACCCACGGCTAAGGTCTTCATTTCCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
3UTR-3UTR CCA 90 bp CCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACGCGCAGGGTGTCACCTTCCATGTCTATCTaGGGTACCACGGCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: PVSQLRSSIRSMTTRRVSPSMSI*GTTACS
Trigger: GCTGCAGGCCGTGGTACCCCAGATAGACATGGAAGG...TGACACCCTGCGCGTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000430390.5
3UTR-3UTR CCA 90 bp GTTGGATCCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCCTAGCTTCAAGGCAGCTGGGCCTTaGTGTGGAGGCTGGGGAAGT +
Preference number: 2 (lower is better)
Translates to: VGSRTRAVGNRSRGFPSFKAAGP*CGGWGS
Trigger: ACTTCCCCAGCCTCCACACCAAGGCCCAGCTGCCTT...GAAGCTAGGGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
3UTR-3UTR TCA 90 bp CTCAAAGCTGGCCTTCCGACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGTGCTGGGTGCCACCTTaGAATCAAGGTTCGGTGGGA +
Preference number: 2 (lower is better)
Translates to: LKAGLPTLHGVLGGLKCVCWVPP*NQGSVG
Trigger: TCCCACCGAACCTTGATTTCAAGGTGGCACCCAGCA...CACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAGCTTTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
3UTR-3UTR TCA 90 bp AAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCGCAGGAGCCTCGGTGTaGAAGGAGGGGAGAAGAGGG +
Preference number: 2 (lower is better)
Translates to: KREMIRSLWRKGLLRETSAGASV*KEGRRG
Trigger: CCCTCTTCTCCCCTCCTTTCACACCGAGGCTCCTGC...GCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000473661.5
3UTR-3UTR CCA 90 bp CTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCCTCGAAATCAAGGTTCGGTaGGAGGGAAATGAAGACCTT +
Preference number: 2 (lower is better)
Translates to: LRETSSSLGVPASLGAALEIKVR*EGNEDL
Trigger: AAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTC...GAGGGCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
3UTR-3UTR CCA 90 bp TATGACTTCCACTCAGACTTCACCACCAGCTTGAGAACGTTGCGGGCAGCAGTCGACCAGCTCTTCCCTTaGGGTGCCAGCCAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: YDFHSDFTTSLRTLRAAVDQLFP*GASQPG
Trigger: CCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTC...GACTGCTGCCCGCAACGTTCTCAAGCTGGTGGTGAAGTCTGAGTGGAAGTCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427220.5
3UTR-3UTR CCA 90 bp CCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCGACCAGCTCTTCCCTTaGGGTGCCAGCCAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: PLALTFRQVLGIVPTSKGDQLFP*GASQPG
Trigger: CCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTC...GCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000473661.5
3UTR-3UTR CCA 90 bp AGCAGGCTGCTTATAGATGAGCTCAAAGGCTCCTGTGTCACAGTTGCGGTCCAGCAAGGCACTTCCAGCTaGGGGCCTCGGAGGCACAGG +
Preference number: 2 (lower is better)
Translates to: SRLLIDELKGSCVTVAVQQGTSS*GPRRHR
Trigger: CCTGTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTG...CTGGACCGCAACTGTGACACAGGAGCCTTTGAGCTCATCTATAAGCAGCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473661.5
3UTR-3UTR CCA 90 bp ACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCATGGCAGGCCTCAGCCCTaGGTTTGTCACAGTCTGGCC +
Preference number: 2 (lower is better)
Translates to: TLHGVLGGLKCVDHSILHGRPQP*VCHSLA
Trigger: GGCCAGACTGTGACAAACCCAGGGCTGAGGCCTGCC...ATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
3UTR-3UTR CCA 90 bp GGTGGGAGGGAAATGAAGACCTTAGCCGTGGGTAGAGTCCTCAAGGCCTTGCCTTCCTGCAGGTGGGCCTaGAACCTCTGGCTAGACCAC +
Preference number: 2 (lower is better)
Translates to: GGREMKTLAVGRVLKALPSCRWA*NLWLDH
Trigger: GTGGTCTAGCCAGAGGTTCCAGGCCCACCTGCAGGA...AGGCAAGGCCTTGAGGACTCTACCCACGGCTAAGGTCTTCATTTCCCTCCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
3UTR CAA 90 bp CCAAAGATGAGGAGGGGCCGCTCAATATACTTCTGCACCACCCACTaGCCGTCCTTCATCACCACGGGGTTGCCGTTCACCAGCTTCAGC +
Preference number: 2 (lower is better)
Translates to: PKMRRGRSIYFCTTH*PSFITTGLPFTSFS
Trigger: GCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGAAGGACGGCAAGTGGGTGGTGCAGAAGTATATTGAGCGGCCCCTCCTCATCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430390.5
3UTR CAA 90 bp GGCTGGGTCTGCATCCCAGCTGTGCCCCTTCTGAGCTGTGCAACCTaGGGCAACTTCCTTAAACTTCCTGATACCTCGGCTTCCCCAGAG +
Preference number: 2 (lower is better)
Translates to: GWVCIPAVPLLSCAT*GNFLKLPDTSASPE
Trigger: CTCTGGGGAAGCCGAGGTATCAGGAAGTTTAAGGAAGTTGCCCAAGGTTGCACAGCTCAGAAGGGGCACAGCTGGGATGCAGACCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473661.5
3UTR-3UTR CCA 90 bp CTTGAATTTGCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACGGGTGCCAGCCAGCCTaGGAGCTGCCCTCTGCCTGT +
Preference number: 2 (lower is better)
Translates to: LEFAFGLDLPTGARNCSDGCQPA*ELPSAC
Trigger: ACAGGCAGAGGGCAGCTCCCAGGCTGGCTGGCACCC...GTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAAATTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000473661.5
3UTR-3UTR CCA 90 bp CCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCGGCAGGCCTCAGCCCTaGGTTTGTCACAGTCTGGCC +
Preference number: 2 (lower is better)
Translates to: PLALTFRQVLGIVPTSKGGRPQP*VCHSLA
Trigger: GGCCAGACTGTGACAAACCCAGGGCTGAGGCCTGCC...GCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
3UTR-3UTR CCA 90 bp ACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCATAGGCCCCTGCGCCTCTaGAATGTACCAACAAGGGGC +
Preference number: 2 (lower is better)
Translates to: TLHGVLGGLKCVDHSILHRPLRL*NVPTRG
Trigger: GCCCCTTGTTGGTACATTCCAGAGGCGCAGGGGCCT...ATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
3UTR-3UTR CCA 90 bp AGGGGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGCTCCTGTTTCAGGCTaGTCACGGTGGCTGACGCCT +
Preference number: 2 (lower is better)
Translates to: RGEEGDDQKSVEEGASEGAPVSG*SRWLTP
Trigger: AGGCGTCAGCCACCGTGACCAGCCTGAAACAGGAGC...TCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427220.5
3UTR-3UTR CCA 90 bp TACCCTGCTCAGCCCCTAGGCTTGAGGCCTGTTCTGGTTCCAGAACCTGATCATGCTCCTGTTTCAGGCTaGTCACGGTGGCTGACGCCT +
Preference number: 2 (lower is better)
Translates to: YPAQPLGLRPVLVPEPDHAPVSG*SRWLTP
Trigger: AGGCGTCAGCCACCGTGACCAGCCTGAAACAGGAGC...ATGATCAGGTTCTGGAACCAGAACAGGCCTCAAGCCTAGGGGCTGAGCAGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
3UTR-3UTR CCA 90 bp TTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGAGCAGGAGCCTTTCTTaGCTTCAGGATGCTGGGTGC +
Preference number: 2 (lower is better)
Translates to: LFRLQRAEATRHFQLGASSRSLS*LQDAGC
Trigger: GCACCCAGCATCCTGAAGCCAAGAAAGGCTCCTGCT...CGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000438141.5
3UTR CAA 90 bp TGGGGCAGGCCTCAGCCCTGGGTTTGTCACAGTCTGGCCTTGAATTaGCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCG +
Preference number: 2 (lower is better)
Translates to: WGRPQPWVCHSLALN*PLALTFRQVLGIVP
Trigger: CGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAAATTCAAGGCCAGACTGTGACAAACCCAGGGCTGAGGCCTGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
3UTR CAA 90 bp TACAGCGGGGCCTCCAGGTCCTTGTCGATGTCCATGTGGGCCAAGTaGCTAAGGTACTCCTCGCACGCACACAGAGCTTCATCCACAAAC +
Preference number: 2 (lower is better)
Translates to: YSGASRSLSMSMWAK*LRYSSHAHRASSTN
Trigger: GTTTGTGGATGAAGCTCTGTGTGCGTGCGAGGAGTACCTTAGCAACTTGGCCCACATGGACATCGACAAGGACCTGGAGGCCCCGCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427220.5
3UTR-3UTR GCA 90 bp CCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCCAGCCAGAAGTCCTCTaGTCCCAGGCCAGGGGATAC +
Preference number: 2 (lower is better)
Translates to: PLALTFRQVLGIVPTSKGQPEVL*SQARGY
Trigger: GTATCCCCTGGCCTGGGAGCAGAGGACTTCTGGCTG...GCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427220.5
3UTR-3UTR CCA 90 bp GTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGGAAATCAAGGTTCGGTaGGAGGGAAATGAAGACCTT +
Preference number: 2 (lower is better)
Translates to: VEEGASEGDQLFPWGASQEIKVR*EGNEDL
Trigger: AAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTC...CTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
3UTR-3UTR CCA 90 bp AATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTGAGGCCCACCTTTCTTaGCTTCAGGATGCTGGGTGC +
Preference number: 2 (lower is better)
Translates to: NCSDFKGQRQQGTSSWGPEAHLS*LQDAGC
Trigger: GCACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTC...AGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
3UTR-3UTR CCA 90 bp AGCCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAATCAAGGTTCGGTGGAGGCCCCTGCGCCTCTaGAATGTACCAACAAGGGGC +
Preference number: 2 (lower is better)
Translates to: SLSWLQDAGCHLEIKVRWRPLRL*NVPTRG
Trigger: GCCCCTTGTTGGTACATTCCAGAGGCGCAGGGGCCT...CCACCGAACCTTGATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000438141.5
3UTR-3UTR CCA 90 bp GCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGAGGCCCCTGCGCCTCTaGAATGTACCAACAAGGGGC +
Preference number: 2 (lower is better)
Translates to: AFGLDLPTGARNCSDFKGRPLRL*NVPTRG
Trigger: GCCCCTTGTTGGTACATTCCAGAGGCGCAGGGGCCT...CCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
3UTR-3UTR CCA 90 bp GCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCCAGGACAAGGGCAGTaGGGAATCGAAGCAGGGGCT +
Preference number: 2 (lower is better)
Translates to: AFGLDLPTGARNCSDFKGPGQGQ*GIEAGA
Trigger: AGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGG...CCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
3UTR-3UTR CCA 90 bp GAGCTCAAAGGCTCCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACCATAGAGCTCAAAGCTaGCCTTCCGACACTGCACGG +
Preference number: 2 (lower is better)
Translates to: ELKGSCVTVAVQHPVNDHHRAQS*PSDTAR
Trigger: CCGTGCAGTGTCGGAAGGCCAGCTTTGAGCTCTATG...GTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCCTTTGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
3UTR-3UTR TCA 90 bp ACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGACTGTCCACTGGGTGTaGGTCACAGGTCGAGGCCCA +
Preference number: 2 (lower is better)
Translates to: TFRQVLGIVPTSKGRGNKTVHWV*VTGRGP
Trigger: TGGGCCTCGACCTGTGACTCACACCCAGTGGACAGT...CTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
3UTR-3UTR TCA 90 bp TACCCTGCTCAGCCCCTAGGCTTGAGGCCTGTTCTGGTTCCAGAACCTGATCATAGCACTTTGGGAGGCTaGGGTGGATGGATCATGAGG +
Preference number: 2 (lower is better)
Translates to: YPAQPLGLRPVLVPEPDHSTLGG*GGWIMR
Trigger: CCTCATGATCCATCCACCTCAGCCTCCCAAAGTGCT...ATGATCAGGTTCTGGAACCAGAACAGGCCTCAAGCCTAGGGGCTGAGCAGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474948.5
ENST00000496246.5
3UTR-3UTR GCA 90 bp ATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTATGGCCTCAGGCTCTTaGTGTGGACCCTGGGGTACA +
Preference number: 2 (lower is better)
Translates to: MIRSLWRKGLLRETSSSLMASGS*CGPWGT
Trigger: TGTACCCCAGGGTCCACAGCAAGAGCCTGAGGCCAT...AAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383827.5
3UTR-3UTR GCA 90 bp ACCACCAGCTTGAGAACGTTGCGGGCAGCAGTCAGCCAGAAGTCCTCTGCTCCCCCTGAGTTTAGAACTTaGTCCTGTTTCAGGCTGGTC +
Preference number: 2 (lower is better)
Translates to: TTSLRTLRAAVSQKSSAPPEFRT*SCFRLV
Trigger: GACCAGCCTGAAACAGGAGCAAGTTCTAAACTCAGG...GGGAGCAGAGGACTTCTGGCTGACTGCTGCCCGCAACGTTCTCAAGCTGGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
3UTR-3UTR GCA 90 bp GGCTTCCCTAGCTTCATATCCCCCAGGCCCCTGCGCCTCTGGAATGTACCAACAGAGTTGTTGCACAGGTaGACTGAGTTGTCCAGGTTC +
Preference number: 2 (lower is better)
Translates to: GFPSFISPRPLRLWNVPTELLHR*TELSRF
Trigger: GAACCTGGACAACTCAGTGCACCTGTGCAACAACTC...TGTTGGTACATTCCAGAGGCGCAGGGGCCTGGGGGATATGAAGCTAGGGAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000473661.5
3UTR-3UTR GCA 90 bp TATTTGGTGTTGGATCCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCCTACCAGGAGCCGGATaGCCACATATTGAGGCACCT +
Preference number: 2 (lower is better)
Translates to: YLVLDPGQGQWGIEAGASLPGAG*PHIEAP
Trigger: AGGTGCCTCAATATGTGGGCATCCGGCTCCTGGTAG...GGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAACACCAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473661.5
3UTR-3UTR CCA 90 bp ATAGGGTATGACTTCCACTCAGACTTCACCACCAGCTTGAGAACGTTGCGGGCAGCTCCTGTTTCAGGCTaGTCACGGTGGCTGACGCCT +
Preference number: 2 (lower is better)
Translates to: IGYDFHSDFTTSLRTLRAAPVSG*SRWLTP
Trigger: AGGCGTCAGCCACCGTGACCAGCCTGAAACAGGAGC...TGCCCGCAACGTTCTCAAGCTGGTGGTGAAGTCTGAGTGGAAGTCATACCCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
3UTR-3UTR CCA 90 bp ACCACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGCATGAGTTCTCCAGGTAGCAGGAGCCTTTCTTaGCTTCAGGATGCTGGGTGC +
Preference number: 2 (lower is better)
Translates to: TTCCLAEAVDADGMSSPGSRSLS*LQDAGC
Trigger: GCACCCAGCATCCTGAAGCCAAGAAAGGCTCCTGCT...ACCTGGAGAACTCATGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430390.5
3UTR CAA 90 bp TCTTCATGGGGCAGGCCTCAGCCCTGGGTTTGTCACAGTCTGGCCTaGAATTTGCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATT +
Preference number: 2 (lower is better)
Translates to: SSWGRPQPWVCHSLA*NLPLALTFRQVLGI
Trigger: AATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAAATTCAAGGCCAGACTGTGACAAACCCAGGGCTGAGGCCTGCCCCATGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
3UTR CAA 90 bp CTTCTTGATGGTGAAGCCCTCTACCAGGAGCCGGATGCCCACATATaGAGGCACCTCCACAGCAGGCTGCTTATAGATGAGCTCAAAGGC +
Preference number: 2 (lower is better)
Translates to: LLDGEALYQEPDAHI*RHLHSRLLIDELKG
Trigger: GCCTTTGAGCTCATCTATAAGCAGCCTGCTGTGGAGGTGCCTCAATATGTGGGCATCCGGCTCCTGGTAGAGGGCTTCACCATCAAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473661.5
3UTR-3UTR TCA 90 bp ATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTCCTCTGCAGAAGGGCTaGGGTTTAGGCAAGGCCAAT +
Preference number: 2 (lower is better)
Translates to: MIRSLWRKGLLRETSSSLPLQKG*GLGKAN
Trigger: ATTGGCCTTGCCTAAACCTCAGCCCTTCTGCAGAGG...AAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383827.5
3UTR-3UTR TCA 90 bp ATCACAGCATCCTTCATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGGCATGGATGCCGATGGCATaGGTTCTCCAGGTGCTTCTG +
Preference number: 2 (lower is better)
Translates to: ITASFMPGTMMVDQAFGAWMPMA*VLQVLL
Trigger: CAGAAGCACCTGGAGAACTCATGCCATCGGCATCCA...TGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCATGAAGGATGCTGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
3UTR-3UTR TCA 90 bp TATGACTTCCACTCAGACTTCACCACCAGCTTGAGAACGTTGCGGGCAGCAGTCAGCACTTTGGGAGGCTaGGGTGGATGGATCATGAGG +
Preference number: 2 (lower is better)
Translates to: YDFHSDFTTSLRTLRAAVSTLGG*GGWIMR
Trigger: CCTCATGATCCATCCACCTCAGCCTCCCAAAGTGCT...GACTGCTGCCCGCAACGTTCTCAAGCTGGTGGTGAAGTCTGAGTGGAAGTCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474948.5
ENST00000496246.5
3UTR-3UTR GCA 90 bp TACAGCGGGGCCTCCAGGTCCTTGTCGATGTCCATGTGGGCCAAGTTGCTAAGGCTTCAGGATGCTGGGTaGCACCTTGAAATCAAGGTT +
Preference number: 2 (lower is better)
Translates to: YSGASRSLSMSMWAKLLRLQDAG*HLEIKV
Trigger: AACCTTGATTTCAAGGTGGCACCCAGCATCCTGAAG...CCTTAGCAACTTGGCCCACATGGACATCGACAAGGACCTGGAGGCCCCGCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427220.5
3UTR-3UTR GCA 90 bp CCTGAGTTCTGCCCCTTCGTGGACCACTTGGTAGTAGCGCTGGAGGAAGAGGGACCTGAGTTTAGAACTTaGTCCTGTTTCAGGCTGGTC +
Preference number: 2 (lower is better)
Translates to: PEFCPFVDHLVVALEEEGPEFRT*SCFRLV
Trigger: GACCAGCCTGAAACAGGAGCAAGTTCTAAACTCAGG...TCCCTCTTCCTCCAGCGCTACTACCAAGTGGTCCACGAAGGGGCAGAACTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427220.5
3UTR-3UTR GCA 90 bp CAGGCCAGGGGATACCCTGCTCAGCCCCTAGGCTTGAGGCCTGTTCTGGTTCCAAACCTGATCATGACTTaGCCCATTTTGGATCCAGAA +
Preference number: 2 (lower is better)
Translates to: QARGYPAQPLGLRPVLVPNLIMT*PILDPE
Trigger: TTCTGGATCCAAAATGGGGCAAGTCATGATCAGGTT...TGGAACCAGAACAGGCCTCAAGCCTAGGGGCTGAGCAGGGTATCCCCTGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
3UTR-3UTR GCA 90 bp ACGCACACAGAGCTTCATCCACAAACTCTGGGGACACCAACACTGGGTTTTTCTCAGCCAGAAGTCCTCTaGTCCCAGGCCAGGGGATAC +
Preference number: 2 (lower is better)
Translates to: THTELHPQTLGTPTLGFSQPEVL*SQARGY
Trigger: GTATCCCCTGGCCTGGGAGCAGAGGACTTCTGGCTG...AGAAAAACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAAGCTCTGTGTGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000496246.5
3UTR-3UTR GCA 90 bp CAGGTCGAGGCCCACCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAATCTCTGGATGGAGTTGTTaGACAGGTGCACTGAGTTGC +
Preference number: 2 (lower is better)
Translates to: QVEAHLSWLQDAGCHLEISGWSC*TGALSC
Trigger: GCAACTCAGTGCACCTGTGCAACAACTCCATCCAGA...GATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTCGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427220.5
3UTR-3UTR CCA 90 bp ATGAGCTCAAAGGCTCCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCGGGAGAAGGGCTGCGTaGAAAAGCGGATATAGCTGT +
Preference number: 2 (lower is better)
Translates to: MSSKAPVSQLRSSIRSMTGRRAA*KSGYSC
Trigger: ACAGCTATATCCGCTTTTCCACGCAGCCCTTCTCCC...GGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCCTTTGAGCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430390.5
3UTR-3UTR TCA 90 bp ACGCACACAGAGCTTCATCCACAAACTCTGGGGACACCAACACTGGGTTTTTCTACTTCACCACCAGCTTaGGAACGTTGCGGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: THTELHPQTLGTPTLGFSTSPPA*ERCGQQ
Trigger: CTGCTGCCCGCAACGTTCTCAAGCTGGTGGTGAAGT...AGAAAAACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAAGCTCTGTGTGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000496246.5
3UTR-3UTR TCA 90 bp GGTGGGAGGGAAATGAAGACCTTAGCCGTGGGTAGAGTCCTCAAGGCCTTGCCTTGCCTGAATAGGGTATaGCTTCCACTCAGACTTCAC +
Preference number: 2 (lower is better)
Translates to: GGREMKTLAVGRVLKALPCLNRV*LPLRLH
Trigger: GTGAAGTCTGAGTGGAAGTCATACCCTATTCAGGCA...AGGCAAGGCCTTGAGGACTCTACCCACGGCTAAGGTCTTCATTTCCCTCCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427220.5
3UTR-3UTR TCA 90 bp AAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCCAGGCTGCTTATAGATaGGCTCAAAGGCTCCTGTGT +
Preference number: 2 (lower is better)
Translates to: KREMIRSLWRKGLLRETSQAAYR*AQRLLC
Trigger: ACACAGGAGCCTTTGAGCTCATCTATAAGCAGCCTG...GCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473661.5
3UTR-3UTR CCA 90 bp TCAAAGGCTCCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACGCGCGAAATCAAGGTTCGGTaGGAGGGAAATGAAGACCTT +
Preference number: 2 (lower is better)
Translates to: SKAPVSQLRSSIRSMTTREIKVR*EGNEDL
Trigger: AAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTC...GCGCGTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
3UTR-3UTR CCA 90 bp GAGCTCAAAGGCTCCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACTTGTCGATGTCCATGTaGGCCAAGTTGCTAAGGTAC +
Preference number: 2 (lower is better)
Translates to: ELKGSCVTVAVQHPVNDHLSMSM*AKLLRY
Trigger: GTACCTTAGCAACTTGGCCCACATGGACATCGACAA...GTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCCTTTGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427220.5
3UTR CAA 90 bp TGCCACCACACCCAGCTAATTTTCTGTAGAAACGGTTTCACCATGTaGCCCAGACTGGTCTTGAACTTGCGGGCTCAAGCGATCTCCTGC +
Preference number: 2 (lower is better)
Translates to: CHHTQLIFCRNGFTM*PRLVLNLRAQAISC
Trigger: GCAGGAGATCGCTTGAGCCCGCAAGTTCAAGACCAGTCTGGGCAACATGGTGAAACCGTTTCTACAGAAAATTAGCTGGGTGTGGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
3UTR-3UTR GCA 90 bp GATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTCTTCAGGATGCTGGGTaGCACCTTGAAATCAAGGTT +
Preference number: 2 (lower is better)
Translates to: DDQKSVEEGASEGDQLFPLQDAG*HLEIKV
Trigger: AACCTTGATTTCAAGGTGGCACCCAGCATCCTGAAG...AGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
3UTR-3UTR GCA 90 bp GCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCCTTCAGGATGCTGGGTaGCACCTTGAAATCAAGGTT +
Preference number: 2 (lower is better)
Translates to: ALTFRQVLGIVPTSKGRGLQDAG*HLEIKV
Trigger: AACCTTGATTTCAAGGTGGCACCCAGCATCCTGAAG...GCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000438141.5
ENST00000473661.5
3UTR-3UTR CCA 90 bp CTGTTCTGGTTCCAGAACCTGATCATGACTTGCCCCATTTTGGATCCAGAACCTGAGGCCCACCTTTCTTaGCTTCAGGATGCTGGGTGC +
Preference number: 2 (lower is better)
Translates to: LFWFQNLIMTCPILDPEPEAHLS*LQDAGC
Trigger: GCACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTC...AGGTTCTGGATCCAAAATGGGGCAAGTCATGATCAGGTTCTGGAACCAGAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427220.5
3UTR-3UTR CCA 90 bp GTTGGATCCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCCTAGCTTCACACTTTTCTTCAGGTaGGTGTGGCTTATTGGATGT +
Preference number: 2 (lower is better)
Translates to: VGSRTRAVGNRSRGFPSFTLFFR*VWLIGC
Trigger: ACATCCAATAAGCCACACCCACCTGAAGAAAAGTGT...GAAGCTAGGGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383827.5
3UTR CAA 90 bp CAGTTCTGGCAATATGTCCCTGCGTCGACTCACTGCCACGTGATCTaGGGTAAGCCATGCCTCCTCTTTCAGACTCAGTTTCTTCATCTG +
Preference number: 2 (lower is better)
Translates to: QFWQYVPASTHCHVI*GKPCLLFQTQFLHL
Trigger: CAGATGAAGAAACTGAGTCTGAAAGAGGAGGCATGGCTTACCCAAGATCACGTGGCAGTGAGTCGACGCAGGGACATATTGCCAGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
3UTR-3UTR TCA 90 bp TTGCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGGAGAAGAGGGAGATaGTCAGAAGTCTGTGGAGGA +
Preference number: 2 (lower is better)
Translates to: LPLALTFRQVLGIVPTSKGRRGR*SEVCGG
Trigger: TCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCC...CTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000473661.5
3UTR-3UTR GCA 90 bp ATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTCTTCAGGATGCTGGGTaGCACCTTGAAATCAAGGTT +
Preference number: 2 (lower is better)
Translates to: MIRSLWRKGLLRETSSSLLQDAG*HLEIKV
Trigger: AACCTTGATTTCAAGGTGGCACCCAGCATCCTGAAG...AAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
3UTR-3UTR GCA 90 bp GCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGTCACGATCCAGATGTTaGGATCCCCTTCCATGTCTA +
Preference number: 2 (lower is better)
Translates to: AFGLDLPTGARNCSDFKGSRSRC*DPLPCL
Trigger: TAGACATGGAAGGGGATCGCAACATCTGGATCGTGA...CCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000430390.5
3UTR-3UTR TCA 90 bp CGCACACAGAGCTTCATCCACAAACTCTGGGGACACCAACACTGGGTTTTTCTCTGCCTGAATAGGGTATaGCTTCCACTCAGACTTCAC +
Preference number: 2 (lower is better)
Translates to: RTQSFIHKLWGHQHWVFLCLNRV*LPLRLH
Trigger: GTGAAGTCTGAGTGGAAGTCATACCCTATTCAGGCA...GAGAAAAACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAAGCTCTGTGTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000496246.5
3UTR-3UTR CCA 90 bp AGCCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAATCAAGGTTCGGTGGGAAATCAAGGTTCGGTaGGAGGGAAATGAAGACCTT +
Preference number: 2 (lower is better)
Translates to: SLSWLQDAGCHLEIKVRWEIKVR*EGNEDL
Trigger: AAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTC...CCACCGAACCTTGATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000438141.5
3UTR-3UTR GCA 90 bp CTAGGCTTGAGGCCTGTTCTGGTTCCAGAACCTGATCATGACTTGCCCCATTTTCCTGAGTTTAGAACTTaGTCCTGTTTCAGGCTGGTC +
Preference number: 2 (lower is better)
Translates to: LGLRPVLVPEPDHDLPHFPEFRT*SCFRLV
Trigger: GACCAGCCTGAAACAGGAGCAAGTTCTAAACTCAGG...AAAATGGGGCAAGTCATGATCAGGTTCTGGAACCAGAACAGGCCTCAAGCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
3UTR-3UTR CCA 90 bp CGCACACAGAGCTTCATCCACAAACTCTGGGGACACCAACACTGGGTTTTTCTCGAAATCAAGGTTCGGTaGGAGGGAAATGAAGACCTT +
Preference number: 2 (lower is better)
Translates to: RTQSFIHKLWGHQHWVFLEIKVR*EGNEDL
Trigger: AAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTC...GAGAAAAACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAAGCTCTGTGTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427220.5
3UTR-3UTR CCA 90 bp CCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCCTAGCTTCATATCCCTTGTTTCTTTTTATTTaGTGTTGGATCCAGGACAAG +
Preference number: 2 (lower is better)
Translates to: PGQGQWGIEAGASLASYPLFLFI*CWIQDK
Trigger: CTTGTCCTGGATCCAACACCAAATAAAAAGAAACAA...GGGATATGAAGCTAGGGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
3UTR-3UTR CCA 90 bp GTTGGATCCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCCTAGCTTCTTGTTTCTTTTTATTTaGTGTTGGATCCAGGACAAG +
Preference number: 2 (lower is better)
Translates to: VGSRTRAVGNRSRGFPSFLFLFI*CWIQDK
Trigger: CTTGTCCTGGATCCAACACCAAATAAAAAGAAACAA...GAAGCTAGGGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
3UTR-3UTR GCA 90 bp ATAGGGTATGACTTCCACTCAGACTTCACCACCAGCTTGAGAACGTTGCGGGCAAACCTGATCATGACTTaGCCCATTTTGGATCCAGAA +
Preference number: 2 (lower is better)
Translates to: IGYDFHSDFTTSLRTLRANLIMT*PILDPE
Trigger: TTCTGGATCCAAAATGGGGCAAGTCATGATCAGGTT...TGCCCGCAACGTTCTCAAGCTGGTGGTGAAGTCTGAGTGGAAGTCATACCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
3UTR GCA 72 bp GGCTTCCCCAGAGCCTCGCTGGGTCAGCAGAGGGACTaGTGGGCGGACCCCCATCCGCCGATGACACATCGC +
Preference number: 3 (lower is better)
Translates to: GFPRASLGQQRD*WADPHPPMTHR
Trigger: GCGATGTGTCATCGGCGGATGGGGGTCCGCCCAGCAGTCCCTCTGCTGACCCAGCGAGGCTCTGGGGAAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473661.5
3UTR GCA 72 bp CGCTGCACGGAGGAGCTGCTGATGGCCTCAGGCTCTTaGTGTGGACCCTGGGGTACACGGCCTCGCCCCATC +
Preference number: 3 (lower is better)
Translates to: RCTEELLMASGS*CGPWGTRPRPI
Trigger: GATGGGGCGAGGCCGTGTACCCCAGGGTCCACAGCAAGAGCCTGAGGCCATCAGCAGCTCCTCCGTGCAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383827.5
3UTR CCA 72 bp CACGGAGGAGCTGCTGATGGCCTCAGGCTCTTGCTGTaGACCCTGGGGTACACGGCCTCGCCCCATCCACTC +
Preference number: 3 (lower is better)
Translates to: HGGAADGLRLLL*TLGYTASPHPL
Trigger: GAGTGGATGGGGCGAGGCCGTGTACCCCAGGGTCCACAGCAAGAGCCTGAGGCCATCAGCAGCTCCTCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383827.5
3UTR CCA 72 bp TTCCCCAGAGCCTCGCTGGGTCAGCAGAGGGACTGCTaGGCGGACCCCCATCCGCCGATGACACATCGCCAT +
Preference number: 3 (lower is better)
Translates to: FPRASLGQQRDC*ADPHPPMTHRH
Trigger: ATGGCGATGTGTCATCGGCGGATGGGGGTCCGCCCAGCAGTCCCTCTGCTGACCCAGCGAGGCTCTGGGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473661.5
3UTR TCA 72 bp AGTAGCGCTGGAGGAAGAGGGACCAGCCCTCGGGGGTaGGGTACAGCGGGGCCTCCAGGTCCTTGTCGATGT +
Preference number: 3 (lower is better)
Translates to: SSAGGRGTSPRG*GTAGPPGPCRC
Trigger: ACATCGACAAGGACCTGGAGGCCCCGCTGTACCTCACCCCCGAGGGCTGGTCCCTCTTCCTCCAGCGCTACT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427220.5
3UTR GCA 72 bp GGTGTGGAGGCTGGGGAAGTGGTGACGGGCTGGGTCTaGATCCCAGCTGTGCCCCTTCTGAGCTGTGCAACC +
Preference number: 3 (lower is better)
Translates to: GVEAGEVVTGWV*IPAVPLLSCAT
Trigger: GGTTGCACAGCTCAGAAGGGGCACAGCTGGGATGCAGACCCAGCCCGTCACCACTTCCCCAGCCTCCACACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473661.5
3UTR-3UTR CAA 90 bp CGGTCAATGACCACGCGCAGGGTGTCAGCTTGCACGCCAGCACAGAGCCGGGCACGAGGCCCACCTTTCTaGGCTTCAGGATGCTGGGTG +
Preference number: 3 (lower is better)
Translates to: RSMTTRRVSACTPAQSRARGPPF*ASGCWV
Trigger: CACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTCG...TGCCCGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCGCGTGGTCATTGACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
3UTR TCA 72 bp AGCAGAGGGACTGCTGGGCGGACCCCCATCCGCCGATaGCACATCGCCATGGGCTTCTTGATGGTGAAGCCC +
Preference number: 3 (lower is better)
Translates to: SRGTAGRTPIRR*HIAMGFLMVKP
Trigger: GGGCTTCACCATCAAGAAGCCCATGGCGATGTGTCATCGGCGGATGGGGGTCCGCCCAGCAGTCCCTCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473661.5
3UTR GCA 72 bp GCCAGCACAGAGCCGGGCAGTGACTGCTGTGGAGGGTaGCATCGTGGGGCTGGCGTTGATCTCAATCAGCCA +
Preference number: 3 (lower is better)
Translates to: ASTEPGSDCCGG*HRGAGVDLNQP
Trigger: TGGCTGATTGAGATCAACGCCAGCCCCACGATGGCACCCTCCACAGCAGTCACTGCCCGGCTCTGTGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
3UTR GCA 72 bp AGCATCCGGTCAATGACCACGCGCAGGGTGTCAGCTTaGACGCCAGCACAGAGCCGGGCAGTGACTGCTGTG +
Preference number: 3 (lower is better)
Translates to: SIRSMTTRRVSA*TPAQSRAVTAV
Trigger: CACAGCAGTCACTGCCCGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCGCGTGGTCATTGACCGGATGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
3UTR TCA 72 bp TGCAGCTGCTGCAGGATGTCCTCACAGCGCTGGACCTaGGTGTCGAGGTGCCTGAGTTCTGCCCCTTCGTGG +
Preference number: 3 (lower is better)
Translates to: CSCCRMSSQRWT*VSRCLSSAPSW
Trigger: CCACGAAGGGGCAGAACTCAGGCACCTCGACACTCAGGTCCAGCGCTGTGAGGACATCCTGCAGCAGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427220.5
3UTR TCA 72 bp CTCCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATaGCCACGCGCAGGGTGTCAGCTTGCACGCCAGCAC +
Preference number: 3 (lower is better)
Translates to: LLCHSCGPASGQ*PRAGCQLARQH
Trigger: GTGCTGGCGTGCAAGCTGACACCCTGCGCGTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
3UTR GCA 72 bp CGATCCCCTTCCATGTCTATCTGGGGTACCACGGCCTaGAGCTGCTGCAGGATGTCCTCACAGCGCTGGACC +
Preference number: 3 (lower is better)
Translates to: RSPSMSIWGTTA*SCCRMSSQRWT
Trigger: GGTCCAGCGCTGTGAGGACATCCTGCAGCAGCTGCAGGCCGTGGTACCCCAGATAGACATGGAAGGGGATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427220.5
3UTR GCA 72 bp AGCCCGCACCTCCCAGGCTCTCCGTCGCCTCCCAGTTaGCTTTCAGCACAACCTCCACTGTTCTGGAGAGTG +
Preference number: 3 (lower is better)
Translates to: SPHLPGSPSPPS*LSAQPPLFWRV
Trigger: CACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAACTGGGAGGCGACGGAGAGCCTGGGAGGTGCGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455274.5
3UTR-3UTR CAA 90 bp CAAAGCTGGCCTTCCGACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGACGAGGCCCACCTTTCTaGGCTTCAGGATGCTGGGTG +
Preference number: 3 (lower is better)
Translates to: QSWPSDTARCPGRSEVRGRGPPF*ASGCWV
Trigger: CACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTCG...TCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAGCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
3UTR-3UTR CAA 90 bp GAGCTCAAAGGCTCCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACGGGGCCTCCAGGTCCTaGTCGATGTCCATGTGGGCC +
Preference number: 3 (lower is better)
Translates to: ELKGSCVTVAVQHPVNDHGASRS*SMSMWA
Trigger: GGCCCACATGGACATCGACAAGGACCTGGAGGCCCC...GTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCCTTTGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427220.5
3UTR GCA 72 bp CCATGTCTGTCCTTAGGTGGGAATTCTGGGCCTCGCTaGACGGAGGAGCTGCTGATGGCCTCAGGCTCTTGC +
Preference number: 3 (lower is better)
Translates to: PCLSLGGNSGPR*TEELLMASGSC
Trigger: GCAAGAGCCTGAGGCCATCAGCAGCTCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGACATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383827.5
3UTR GCA 72 bp GCACCACCCACTTGCCGTCCTTCATCACCACGGGGTTaGCGTTCACCAGCTTCAGCATCTCCTCCAGGTGGT +
Preference number: 3 (lower is better)
Translates to: APPTCRPSSPRG*RSPASASPPGG
Trigger: ACCACCTGGAGGAGATGCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGAAGGACGGCAAGTGGGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430390.5
3UTR TCA 72 bp TGTCCTCACAGCGCTGGACCTGAGTGTCGAGGTGCCTaGGTTCTGCCCCTTCGTGGACCACTTGGTAGTAGC +
Preference number: 3 (lower is better)
Translates to: CPHSAGPECRGA*VLPLRGPLGSS
Trigger: GCTACTACCAAGTGGTCCACGAAGGGGCAGAACTCAGGCACCTCGACACTCAGGTCCAGCGCTGTGAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427220.5
3UTR GCA 72 bp GGTGCACTGAGTTGCCGTCCTTCATCACCACGGGGTTaGCGTTCACCAGCTTCAGCATCTCCTCCAGGTGGT +
Preference number: 3 (lower is better)
Translates to: GALSCRPSSPRG*RSPASASPPGG
Trigger: ACCACCTGGAGGAGATGCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGAAGGACGGCAACTCAGTGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427220.5
3UTR CCA 72 bp TACAGCGGGGCCTCCAGGTCCTTGTCGATGTCCATGTaGGCCAAGTTGCTAAGGTACTCCTCGCACGCACAC +
Preference number: 3 (lower is better)
Translates to: YSGASRSLSMSM*AKLLRYSSHAH
Trigger: GTGTGCGTGCGAGGAGTACCTTAGCAACTTGGCCCACATGGACATCGACAAGGACCTGGAGGCCCCGCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427220.5
3UTR-3UTR CAA 90 bp GACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCACGCCTTGAATTTGCCTTaGGCCTTGACCTTCCGACAG +
Preference number: 3 (lower is better)
Translates to: DFKGQRQQGTSSWGPRRHALNLP*ALTFRQ
Trigger: CTGTCGGAAGGTCAAGGCCAAAGGCAAATTCAAGGC...GTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
3UTR-3UTR CAA 90 bp CCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCGATGGCCTCAGGCTCTaGCTGTGGACCCTGGGGTAC +
Preference number: 3 (lower is better)
Translates to: PLALTFRQVLGIVPTSKGDGLRL*LWTLGY
Trigger: GTACCCCAGGGTCCACAGCAAGAGCCTGAGGCCATC...GCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383827.5
3UTR-3UTR CAA 90 bp ATGAGCTCAAAGGCTCCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACCAGCTTGAGAACGTaGCGGGCAGCAGTCAGCCAG +
Preference number: 3 (lower is better)
Translates to: MSSKAPVSQLRSSIRSMTTSLRT*RAAVSQ
Trigger: CTGGCTGACTGCTGCCCGCAACGTTCTCAAGCTGGT...GGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCCTTTGAGCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427220.5
3UTR-3UTR CAA 90 bp TCCTTCATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACCCATCTCCTTCTGCACCACCCACTaGCCGTCCTTCATCACCACG +
Preference number: 3 (lower is better)
Translates to: SFMPGTMMVDQAFGAPISFCTTH*PSFITT
Trigger: CGTGGTGATGAAGGACGGCAAGTGGGTGGTGCAGAA...GGAGATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCATGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000431204.5
3UTR GCA 72 bp ATGATGGTGGACCAAGCATTTGGGGCACCCATCTCCTaGAGGTGGGCCTGGAACCTCTGGCTAGACCACATG +
Preference number: 3 (lower is better)
Translates to: MMVDQAFGAPIS*RWAWNLWLDHM
Trigger: CATGTGGTCTAGCCAGAGGTTCCAGGCCCACCTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACCATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
3UTR GCA 72 bp CTTCCGACACTGCACGGTGTCCTGGGAGGTCTGAAGTaGGTGGATCACAGCATCCTTCATGCCAGGCACGAT +
Preference number: 3 (lower is better)
Translates to: LPTLHGVLGGLK*VDHSILHARHD
Trigger: ATCGTGCCTGGCATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTCGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
3UTR CCA 72 bp ACGATCCAGATGTTGCGATCCCCTTCCATGTCTATCTaGGGTACCACGGCCTGCAGCTGCTGCAGGATGTCC +
Preference number: 3 (lower is better)
Translates to: TIQMLRSPSMSI*GTTACSCCRMS
Trigger: GGACATCCTGCAGCAGCTGCAGGCCGTGGTACCCCAGATAGACATGGAAGGGGATCGCAACATCTGGATCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000430390.5
3UTR-3UTR CAA 90 bp AGCATCCTTCATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACCCATGCCTCAGCCCTGGGTTaGTCACAGTCTGGCCTTGAA +
Preference number: 3 (lower is better)
Translates to: SILHARHDDGGPSIWGTHASALG*SQSGLE
Trigger: TTCAAGGCCAGACTGTGACAAACCCAGGGCTGAGGC...ATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCATGAAGGATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
3UTR TCA 72 bp GTGCGTGGATCACAGCATCCTTCATGCCAGGCACGATaGTGGTGGACCAAGCATTTGGGGCACCCATCTCCT +
Preference number: 3 (lower is better)
Translates to: VRGSQHPSCQAR*WWTKHLGHPSP
Trigger: AGGAGATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCATGAAGGATGCTGTGATCCACGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
3UTR CCA 72 bp GGTGTCATTCTGCTAGCTTGGCTTGTTCTCTGGGGTTaGGGGGCTCCCAGTGCTCGGCAGTTCTGGCAATAT +
Preference number: 3 (lower is better)
Translates to: GVILLAWLVLWG*GAPSARQFWQY
Trigger: ATATTGCCAGAACTGCCGAGCACTGGGAGCCCCCCAACCCCAGAGAACAAGCCAAGCTAGCAGAATGACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
3UTR GCA 72 bp GTCGAGGCCCACCTTTCTTGGCTTCAGGATGCTGGGTaGCACCTTGAAATCAAGGTTCGGTGGGAGGGAAAT +
Preference number: 3 (lower is better)
Translates to: VEAHLSWLQDAG*HLEIKVRWEGN
Trigger: ATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
3UTR GCA 72 bp TGGCTAGACCACATGTTGTCTGGCGGAAGCAGTGGATaGCGATGGCATGAGTTCTCCAGGTGCTTCTGGATG +
Preference number: 3 (lower is better)
Translates to: WLDHMLSGGSSG*RWHEFSRCFWM
Trigger: CATCCAGAAGCACCTGGAGAACTCATGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
3UTR CCA 72 bp ACTGGGTGTGAGTCACAGGTCGAGGCCCACCTTTCTTaGCTTCAGGATGCTGGGTGCCACCTTGAAATCAAG +
Preference number: 3 (lower is better)
Translates to: TGCESQVEAHLS*LQDAGCHLEIK
Trigger: CTTGATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTCGACCTGTGACTCACACCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
3UTR-3UTR CAA 90 bp TATTTGGTGTTGGATCCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCGCCTTGAATTTGCCTTaGGCCTTGACCTTCCGACAG +
Preference number: 3 (lower is better)
Translates to: YLVLDPGQGQWGIEAGASALNLP*ALTFRQ
Trigger: CTGTCGGAAGGTCAAGGCCAAAGGCAAATTCAAGGC...GGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAACACCAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
3UTR TCA 72 bp TCTGGCAATATGTCCCTGCGTCGACTCACTGCCACGTaGTCTTGGGTAAGCCATGCCTCCTCTTTCAGACTC +
Preference number: 3 (lower is better)
Translates to: SGNMSLRRLTAT*SWVSHASSFRL
Trigger: GAGTCTGAAAGAGGAGGCATGGCTTACCCAAGATCACGTGGCAGTGAGTCGACGCAGGGACATATTGCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
3UTR TCA 72 bp CATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGCATaGGTTCTCCAGGTGCTTCTGGATGGAGTTGTTGCA +
Preference number: 3 (lower is better)
Translates to: HVVWRKQWMPMA*VLQVLLDGVVA
Trigger: TGCAACAACTCCATCCAGAAGCACCTGGAGAACTCATGCCATCGGCATCCACTGCTTCCGCCAGACAACATG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
3UTR GCA 72 bp GGCATGAGTTCTCCAGGTGCTTCTGGATGGAGTTGTTaGACAGGTGCACTGAGTTGCCGTCCTTCATCACCA +
Preference number: 3 (lower is better)
Translates to: GMSSPGASGWSC*TGALSCRPSSP
Trigger: TGGTGATGAAGGACGGCAACTCAGTGCACCTGTGCAACAACTCCATCCAGAAGCACCTGGAGAACTCATGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427220.5
3UTR GCA 72 bp GAGAGCAGGAGCCTTTCTTGGCTTCAGGATGCTGGGTaGCACCTTGAAATCAAGGTTCGGTGGGAGGGAAAT +
Preference number: 3 (lower is better)
Translates to: ESRSLSWLQDAG*HLEIKVRWEGN
Trigger: ATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGCTCCTGCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000438141.5
3UTR GCA 72 bp GGCATGAGTTCTCCAGGTGCTTCTGGATGGAGTTGTTaGACAGGTGCACTGAGTTGTCCAGGTTCTTCAGGG +
Preference number: 3 (lower is better)
Translates to: GMSSPGASGWSC*TGALSCPGSSG
Trigger: CCCTGAAGAACCTGGACAACTCAGTGCACCTGTGCAACAACTCCATCCAGAAGCACCTGGAGAACTCATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000431204.5
3UTR CCA 72 bp CTGAGTTGTCCAGGTTCTTCAGGGAGAAGGGCTGCGTaGAAAAGCGGATATAGCTGTCGCGGTAGAACCACA +
Preference number: 3 (lower is better)
Translates to: LSCPGSSGRRAA*KSGYSCRGRTT
Trigger: TGTGGTTCTACCGCGACAGCTATATCCGCTTTTCCACGCAGCCCTTCTCCCTGAAGAACCTGGACAACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000431204.5
3UTR-3UTR CAA 90 bp TATTTGGTGTTGGATCCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCAGTCTGGCCTTGAATTaGCCTTTGGCCTTGACCTTC +
Preference number: 3 (lower is better)
Translates to: YLVLDPGQGQWGIEAGASSLALN*PLALTF
Trigger: GAAGGTCAAGGCCAAAGGCAAATTCAAGGCCAGACT...GGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAACACCAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
3UTR-3UTR CAA 90 bp CAGGTCCTTGTCGATGTCCATGTGGGCCAAGTTGCTAAGGTACTCCTCGCACGCGAACCTGATCATGACTaGCCCCATTTTGGATCCAGA +
Preference number: 3 (lower is better)
Translates to: QVLVDVHVGQVAKVLLAREPDHD*PHFGSR
Trigger: TCTGGATCCAAAATGGGGCAAGTCATGATCAGGTTC...GCGTGCGAGGAGTACCTTAGCAACTTGGCCCACATGGACATCGACAAGGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427220.5
3UTR-3UTR CAA 90 bp ACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCATTGTCTGAGGTCAAACTaGGTGCCAAAGATGAGGAGG +
Preference number: 3 (lower is better)
Translates to: TLHGVLGGLKCVDHSILHCLRSN*VPKMRR
Trigger: CCTCCTCATCTTTGGCACCAAGTTTGACCTCAGACA...ATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000431204.5
3UTR GCA 72 bp TGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTaGTTAGCCTTGGACTTCTCCGAGCTCTGTTGCACA +
Preference number: 3 (lower is better)
Translates to: CLSAQPPLFWRV*LALDFSELCCT
Trigger: TGTGCAACAGAGCTCGGAGAAGTCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455274.5
3UTR-3UTR CAA 90 bp ATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTTTCTGGATGGAGTTGTaGCACAGGTGCACTGAGTTG +
Preference number: 3 (lower is better)
Translates to: MIRSLWRKGLLRETSSSLFWMEL*HRCTEL
Trigger: CAACTCAGTGCACCTGTGCAACAACTCCATCCAGAA...AAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
3UTR GCA 72 bp CAGGGGACCACAGTTCAACCCACTACAACTAAGCAGTaGCACACTTTTCTTCAGGTGGGTGTGGCTTATTGG +
Preference number: 3 (lower is better)
Translates to: QGTTVQPTTTKQ*HTFLQVGVAYW
Trigger: CCAATAAGCCACACCCACCTGAAGAAAAGTGTGGCACTGCTTAGTTGTAGTGGGTTGAACTGTGGTCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
3UTR-3UTR CAA 90 bp GCACACAGAGCTTCATCCACAAACTCTGGGGACACCAACACTGGGTTTTTCTCCGAACCTGATCATGACTaGCCCCATTTTGGATCCAGA +
Preference number: 3 (lower is better)
Translates to: AHRASSTNSGDTNTGFFSEPDHD*PHFGSR
Trigger: TCTGGATCCAAAATGGGGCAAGTCATGATCAGGTTC...GGAGAAAAACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAAGCTCTGTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000496246.5
3UTR CCA 72 bp GCCTCGCCCCATCCACTCTTGACCCTCCAACAGCAATaGAGTCAAGCCCCAAATACTTCACTTGTTTCTTTT +
Preference number: 3 (lower is better)
Translates to: ASPHPLLTLQQQ*SQAPNTSLVSF
Trigger: AAAAGAAACAAGTGAAGTATTTGGGGCTTGACTCCATTGCTGTTGGAGGGTCAAGAGTGGATGGGGCGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383827.5
3UTR-3UTR CAA 90 bp TGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTGGACTTCAGCAACTCGCACCTTTaGTTTTCTGTCTGCTGCTTT +
Preference number: 3 (lower is better)
Translates to: CLSAQPPLFWRVCLALDFSNSHL*FSVCCF
Trigger: AAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCT...GAAGTCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455274.5
3UTR CCA 72 bp TCTTTTTATTTGGTGTTGGATCCAGGACAAGGGCAGTaGGGAATCGAAGCAGGGGCTTCCCTAGCTTCATAT +
Preference number: 3 (lower is better)
Translates to: SFYLVLDPGQGQ*GIEAGASLASY
Trigger: ATATGAAGCTAGGGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAACACCAAATAAAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
3UTR-3UTR CAA 90 bp ACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCATCTTGTTTCTTTTTATTaGGTGTTGGATCCAGGACAA +
Preference number: 3 (lower is better)
Translates to: TLHGVLGGLKCVDHSILHLVSFY*VLDPGQ
Trigger: TTGTCCTGGATCCAACACCAAATAAAAAGAAACAAG...ATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
3UTR-3UTR CAA 90 bp ATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTCTTGTTTCTTTTTATTaGGTGTTGGATCCAGGACAA +
Preference number: 3 (lower is better)
Translates to: MIRSLWRKGLLRETSSSLLVSFY*VLDPGQ
Trigger: TTGTCCTGGATCCAACACCAAATAAAAAGAAACAAG...AAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
CDS-3UTR CCA 90 bp ATGACCACGCGCAGGGTGTCAGCTTGCACGCCAGCACAGAGCCGGGCAGTGACTACCGCGCCGCCCTCCTaGCGGTACCAGGAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: MTTRRVSACTPAQSRAVTTAPPS*RYQEAE
Trigger: CTCGGCCTCCTGGTACCGCCAGGAGGGCGGCGCGGT...AGTCACTGCCCGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCGCGTGGTCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR TCA 90 bp GTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGACCAGCCCTCGGGGGTaGGGTACAGCGGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: VEEGASEGDQLFPWGASQTSPRG*GTAGPP
Trigger: TGGAGGCCCCGCTGTACCTCACCCCCGAGGGCTGGT...CTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCGCTGCCCTCTGCCTGTaGCCTCCAGCCCTGACCCCG +
Preference number: 4 (lower is better)
Translates to: LWRKGLLRETSSSLGVPAAALCL*PPALTP
Trigger: CGGGGTCAGGGCTGGAGGGCACAGGCAGAGGGCAGC...GGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGGGGTGCCAGCCAGCCTaGGAGCTGCCCTCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: EGASEGDQLFPWGASQPGGCQPA*ELPSAC
Trigger: ACAGGCAGAGGGCAGCTCCCAGGCTGGCTGGCACCC...CCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGCACAGAGCCGGGCAGTaGCTGCTGTGGAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: EGASEGDQLFPWGASQPGHRAGQ*LLWRVP
Trigger: TGGCACCCTCCACAGCAGTCACTGCCCGGCTCTGTG...CCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCACAGAGCCGGGCAGTaGCTGCTGTGGAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: ASEGDQLFPWGASQPGSCHRAGQ*LLWRVP
Trigger: TGGCACCCTCCACAGCAGTCACTGCCCGGCTCTGTG...GCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp CTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCCTCTGCTGTGCTGTCGTCTaGGGACCTGGCCCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: LRETSSSLGVPASLGAALCCAVV*GPGPGV
Trigger: GACACCAGGGCCAGGTCCTCAGACGACAGCACAGCA...GAGGGCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGGCTGGGGAAGTGGTaGCGGGCTTCCCCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: EGASEGDQLFPWGASQPGRLGKW*RASPEP
Trigger: AGGCTCTGGGGAAGCCCGTCACCACTTCCCCAGCCT...CCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000430793.1
CDS-3UTR GCA 90 bp CTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCCTCACGGCCTGCAGCTGCTaGAGGATGTCCTCACAGCGC +
Preference number: 4 (lower is better)
Translates to: LRETSSSLGVPASLGAALTACSC*RMSSQR
Trigger: GCGCTGTGAGGACATCCTGCAGCAGCTGCAGGCCGT...GAGGGCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCCTCTGGGGTACCACGGCCTaGAGCTGCTGCAGGATGTCC +
Preference number: 4 (lower is better)
Translates to: LRETSSSLGVPASLGAALWGTTA*SCCRMS
Trigger: GGACATCCTGCAGCAGCTGCAGGCCGTGGTACCCCA...GAGGGCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCCCAGCCCTGACCCCGTaGTCAGCACTGTCCACTGGG +
Preference number: 4 (lower is better)
Translates to: LLRETSSSLGVPASLGAAPALTP*SALSTG
Trigger: CCCAGTGGACAGTGCTGAGCACGGGGTCAGGGCTGG...GGCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCACGCTGCCCTCTGCCTGTaGCCTCCAGCCCTGACCCCG +
Preference number: 4 (lower is better)
Translates to: DFKGQRQQGTSSWGPRRHAALCL*PPALTP
Trigger: CGGGGTCAGGGCTGGAGGGCACAGGCAGAGGGCAGC...GTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR GCA 90 bp GCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCGCTCTTCCCTTGGGGTaGCAGCCAGCCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ASEGDQLFPWGASQPGSCALPLG*QPAWEL
Trigger: CAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGC...GCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGTCAGCAGAGGGACTaGTGGGCGGACCCCCATCCG +
Preference number: 4 (lower is better)
Translates to: EEGASEGDQLFPWGASQPGQQRD*WADPHP
Trigger: CGGATGGGGGTCCGCCCAGCAGTCCCTCTGCTGACC...AGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGGGGTGCCAGCCAGCCTaGGAGCTGCCCTCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: VEEGASEGDQLFPWGASQGCQPA*ELPSAC
Trigger: ACAGGCAGAGGGCAGCTCCCAGGCTGGCTGGCACCC...CTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCGACCAGCTCTTCCCTTaGGGTGCCAGCCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LLRETSSSLGVPASLGAADQLFP*GASQPG
Trigger: CCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTC...GGCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGGACCAGCTCTTCCCTTaGGGTGCCAGCCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: EGASEGDQLFPWGASQPGDQLFP*GASQPG
Trigger: CCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTC...CCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCAGCAGAGGGACTGCTaGGCGGACCCCCATCCGCCG +
Preference number: 4 (lower is better)
Translates to: SDFKGQRQQGTSSWGPRRQQRDC*ADPHPP
Trigger: CGGCGGATGGGGGTCCGCCCAGCAGTCCCTCTGCTG...CCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000430793.1
ENST00000473661.5
3UTR CAA 72 bp TCGCTGCACGGAGGAGCTGCTGATGGCCTCAGGCTCTaGCTGTGGACCCTGGGGTACACGGCCTCGCCCCAT +
Preference number: 4 (lower is better)
Translates to: SLHGGAADGLRL*LWTLGYTASPH
Trigger: ATGGGGCGAGGCCGTGTACCCCAGGGTCCACAGCAAGAGCCTGAGGCCATCAGCAGCTCCTCCGTGCAGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR TCA 90 bp GGAAGCCCCATGTCTGTCCTTAGGTGGGAATTCTGGGCCTCGCTGCACGGAGGAACCAGCCCTCGGGGGTaGGGTACAGCGGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GSPMSVLRWEFWASLHGGTSPRG*GTAGPP
Trigger: TGGAGGCCCCGCTGTACCTCACCCCCGAGGGCTGGT...TCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGACATGGGGCTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR TCA 90 bp TCTGTCCTTAGGTGGGAATTCTGGGCCTCGCTGCACGGAGGAGCTGCTGATGGCACCAGCCCTCGGGGGTaGGGTACAGCGGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SVLRWEFWASLHGGAADGTSPRG*GTAGPP
Trigger: TGGAGGCCCCGCTGTACCTCACCCCCGAGGGCTGGT...GCCATCAGCAGCTCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR TCA 90 bp GAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGTGCTGTGCTGTCGTCTaGGGACCTGGCCCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: EGASEGDQLFPWGASQPGCCAVV*GPGPGV
Trigger: GACACCAGGGCCAGGTCCTCAGACGACAGCACAGCA...CCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCGCAGGAGCCTCGGTGTaGAAGGAGGGGAGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: ASEGDQLFPWGASQPGSCAGASV*KEGRRG
Trigger: CCCTCTTCTCCCCTCCTTTCACACCGAGGCTCCTGC...GCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR TCA 90 bp CGGTCAATGACCACGCGCAGGGTGTCAGCTTGCACGCCAGCACAGAGCCGGGCAACCCCCATCCGCCGATaGCACATCGCCATGGGCTTC +
Preference number: 4 (lower is better)
Translates to: RSMTTRRVSACTPAQSRATPIRR*HIAMGF
Trigger: GAAGCCCATGGCGATGTGTCATCGGCGGATGGGGGT...TGCCCGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCGCGTGGTCATTGACCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR GCA 90 bp CTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCGGGGCACCCATCTCCTaGAGGTGGGCCTGGAACCTC +
Preference number: 4 (lower is better)
Translates to: LWRKGLLRETSSSLGVPAGAPIS*RWAWNL
Trigger: GAGGTTCCAGGCCCACCTGCAGGAGATGGGTGCCCC...GGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGGACTGCTGTGGAGGGTaGCATCGTGGGGCTGGCGTT +
Preference number: 4 (lower is better)
Translates to: EGASEGDQLFPWGASQPGDCCGG*HRGAGV
Trigger: AACGCCAGCCCCACGATGGCACCCTCCACAGCAGTC...CCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCCTCGTCCGCGGGACTTaGCTCCTGGCTTCACGATCC +
Preference number: 4 (lower is better)
Translates to: LLRETSSSLGVPASLGAALVRGT*LLASRS
Trigger: GGATCGTGAAGCCAGGAGCCAAGTCCCGCGGACGAG...GGCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCCTCAAGGCAGCTGGGCCTTaGTGTGGAGGCTGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LRETSSSLGVPASLGAALKAAGP*CGGWGS
Trigger: ACTTCCCCAGCCTCCACACCAAGGCCCAGCTGCCTT...GAGGGCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGGACCAGCTCTTCCCTTaGGGTGCCAGCCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: VEEGASEGDQLFPWGASQDQLFP*GASQPG
Trigger: CCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTC...CTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp AGCTGGCCTTCCGACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGATCAGTATCCGAGGCGCCCTaGGCGTGGGTGCCTGGGACC +
Preference number: 4 (lower is better)
Translates to: SWPSDTARCPGRSEVRGSVSEAP*AWVPGT
Trigger: GGTCCCAGGCACCCACGCCCAGGGCGCCTCGGATAC...TGATCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000431204.5
CDS-3UTR CCA 90 bp AGCTGGCCTTCCGACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGATCACAGCAGAGGGACTGCTaGGCGGACCCCCATCCGCCG +
Preference number: 4 (lower is better)
Translates to: SWPSDTARCPGRSEVRGSQQRDC*ADPHPP
Trigger: CGGCGGATGGGGGTCCGCCCAGCAGTCCCTCTGCTG...TGATCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR CCA 90 bp GAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGCTGATACCTCGGCTGTaGGTAGGGGTCCCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: EGASEGDQLFPWGASQPGLIPRL*VGVPES
Trigger: GGACTCGGGGACCCCTACCCACAGCCGAGGTATCAG...CCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000443148.5
CDS-3UTR TCA 90 bp GAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGTCACAGCGCTGGACCTaGGTGTCGAGGTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: EGASEGDQLFPWGASQPGSQRWT*VSRCLS
Trigger: ACTCAGGCACCTCGACACTCAGGTCCAGCGCTGTGA...CCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp CTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCCTCGTGTCCTGGGAGGTCTaGAGTGCGTGGATCACAGCA +
Preference number: 4 (lower is better)
Translates to: LRETSSSLGVPASLGAALVSWEV*SAWITA
Trigger: TGCTGTGATCCACGCACTTCAGACCTCCCAGGACAC...GAGGGCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp TCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCACAGAGCCGGGCAGTaGCTGCTGTGGAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: SDFKGQRQQGTSSWGPRRHRAGQ*LLWRVP
Trigger: TGGCACCCTCCACAGCAGTCACTGCCCGGCTCTGTG...CCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR TCA 90 bp AAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGACCAGCATCCGGTCAATaGCCACGCGCAGGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: KGLLRETSSSLGVPASLGPASGQ*PRAGCQ
Trigger: CTGACACCCTGCGCGTGGTCATTGACCGGATGCTGG...TCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp CGGTCAATGACCACGCGCAGGGTGTCAGCTTGCACGCCAGCACAGAGCCGGGCATCAAGGCAGGTAACCTaGCGCATGCCACAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RSMTTRRVSACTPAQSRASRQVT*RMPQPP
Trigger: TGGGGGCTGTGGCATGCGTCAGGTTACCTGCCTTGA...TGCCCGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCGCGTGGTCATTGACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR TCA 90 bp AAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAACCCCCATCCGCCGATaGCACATCGCCATGGGCTTC +
Preference number: 4 (lower is better)
Translates to: KGLLRETSSSLGVPASLGTPIRR*HIAMGF
Trigger: GAAGCCCATGGCGATGTGTCATCGGCGGATGGGGGT...TCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTACCCCCATCCGCCGATaGCACATCGCCATGGGCTTC +
Preference number: 4 (lower is better)
Translates to: EEGASEGDQLFPWGASQPTPIRR*HIAMGF
Trigger: GAAGCCCATGGCGATGTGTCATCGGCGGATGGGGGT...AGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp CTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCCAGCTGTGCCCCTTCTaGGCTGTGCAACCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LLRETSSSLGVPASLGAAQLCPF*AVQPWA
Trigger: TGCCCAAGGTTGCACAGCTCAGAAGGGGCACAGCTG...GGCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCTGGGGTACCACGGCCTaGAGCTGCTGCAGGATGTCC +
Preference number: 4 (lower is better)
Translates to: PTSKGRGNKALPAGGLGGWGTTA*SCCRMS
Trigger: GGACATCCTGCAGCAGCTGCAGGCCGTGGTACCCCA...GCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTTGGGGTACCACGGCCTaGAGCTGCTGCAGGATGTCC +
Preference number: 4 (lower is better)
Translates to: EEGASEGDQLFPWGASQPWGTTA*SCCRMS
Trigger: GGACATCCTGCAGCAGCTGCAGGCCGTGGTACCCCA...AGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCACGGGGCACCCATCTCCTaGAGGTGGGCCTGGAACCTC +
Preference number: 4 (lower is better)
Translates to: DFKGQRQQGTSSWGPRRHGAPIS*RWAWNL
Trigger: GAGGTTCCAGGCCCACCTGCAGGAGATGGGTGCCCC...GTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTCTGGCCTTCCGACACTaGACGGTGTCCTGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: EEGASEGDQLFPWGASQPLAFRH*TVSWEV
Trigger: GACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAG...AGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GCTGGCCTTCCGACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGATCACCGCAGGGTGTCAGCTTaGACGCCAGCACAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: AGLPTLHGVLGGLKCVDHRRVSA*TPAQSR
Trigger: CCGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCG...GTGATCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CAGTTGCGGTCCAGCATCCGGTCAATGACCACGCGCAGGGTGTCAGCTTGCACGGGGTGCTCGGCTACATaGCAGGCCCATGGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: QLRSSIRSMTTRRVSACTGCSAT*QAHGRA
Trigger: AGCCCTCCCATGGGCCTGGCATGTAGCCGAGCACCC...CGTGCAAGCTGACACCCTGCGCGTGGTCATTGACCGGATGCTGGACCGCAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR GCA 90 bp GTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGACGTGGCTCGAGCGGCTaGGGCTTCCGCAGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: VPTSKGRGNKALPAGGLGRGSSG*GFRSQL
Trigger: CAACTGGCTGCGGAAGCCGCAGCCGCTCGAGCCACG...TCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR GCA 90 bp GACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCACCTGGCATCTGCCGCCTaGGTGACCCTCCTCGGACTG +
Preference number: 4 (lower is better)
Translates to: DFKGQRQQGTSSWGPRRHLASAA*VTLLGL
Trigger: CAGTCCGAGGAGGGTCACGCAGGCGGCAGATGCCAG...GTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR GCA 90 bp TCTGTCCTTAGGTGGGAATTCTGGGCCTCGCTGCACGGAGGAGCTGCTGATGGCTGCCCGCCTGGCATCTaGCGCCTGCGTGACCCTCCT +
Preference number: 4 (lower is better)
Translates to: SVLRWEFWASLHGGAADGCPPGI*RLRDPP
Trigger: AGGAGGGTCACGCAGGCGGCAGATGCCAGGCGGGCA...GCCATCAGCAGCTCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR GCA 90 bp GGAAGCCCCATGTCTGTCCTTAGGTGGGAATTCTGGGCCTCGCTGCACGGAGGAGGTCAGCAGAGGGACTaGTGGGCGGACCCCCATCCG +
Preference number: 4 (lower is better)
Translates to: GSPMSVLRWEFWASLHGGGQQRD*WADPHP
Trigger: CGGATGGGGGTCCGCCCAGCAGTCCCTCTGCTGACC...TCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGACATGGGGCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR GCA 90 bp AAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGTGACGGGCTGGGTCTaGATCCCAGCTGTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: KGLLRETSSSLGVPASLGVTGWV*IPAVPL
Trigger: AAGGGGCACAGCTGGGATGCAGACCCAGCCCGTCAC...TCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCCTCTCAATCAGCCAGGGCTaGAAGTCCTCCCCGAACACG +
Preference number: 4 (lower is better)
Translates to: LRETSSSLGVPASLGAALSISQG*KSSPNT
Trigger: CGTGTTCGGGGAGGACTTCCAGCCCTGGCTGATTGA...GAGGGCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTCCTTGGTGTGGAGGCTaGGGAAGTGGTGACGGGCTG +
Preference number: 4 (lower is better)
Translates to: EEGASEGDQLFPWGASQPPWCGG*GSGDGL
Trigger: CAGCCCGTCACCACTTCCCCAGCCTCCACACCAAGG...AGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGGCTGAGGCAGGAGAATaGCGGGAACCTGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: SDFKGQRQQGTSSWGPRRAEAGE*REPGRR
Trigger: CCGCCTCCCAGGTTCCCGCCATTCTCCTGCCTCAGC...CCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR CCA 90 bp CTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCCTCGAGGCCCACCTTTCTTaGCTTCAGGATGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LRETSSSLGVPASLGAALEAHLS*LQDAGC
Trigger: GCACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTC...GAGGGCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CTGCCCCTTCGTGGACCACTTGGTAGTAGCGCTGGAGGAAGAGGGACCAGCCCTGACCAGCTCTTCCCTTaGGGTGCCAGCCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LPLRGPLGSSAGGRGTSPDQLFP*GASQPG
Trigger: CCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTC...AGGGCTGGTCCCTCTTCCTCCAGCGCTACTACCAAGTGGTCCACGAAGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR CCA 90 bp GACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCACCAAGGCACTTCCAGCTaGGGGCCTCGGAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: DFKGQRQQGTSSWGPRRHQGTSS*GPRRHR
Trigger: CCTGTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTG...GTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCACGGCTCAGCCTCTTCATaGGGCAGGCCTCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: DFKGQRQQGTSSWGPRRHGSASS*GRPQPW
Trigger: CCAGGGCTGAGGCCTGCCCCATGAAGAGGCTGAGCC...GTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GGCTCCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACGCGCAGGGTGGCTCAGCCTCTTCATaGGGCAGGCCTCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GSCVTVAVQHPVNDHAQGGSASS*GRPQPW
Trigger: CCAGGGCTGAGGCCTGCCCCATGAAGAGGCTGAGCC...ACCCTGCGCGTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCTCAGGCTCTTGCTGTaGACCCTGGGGTACACGGCC +
Preference number: 4 (lower is better)
Translates to: VEEGASEGDQLFPWGASQLRLLL*TLGYTA
Trigger: GGCCGTGTACCCCAGGGTCCACAGCAAGAGCCTGAG...CTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR CCA 90 bp CTCAAAGCTGGCCTTCCGACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGGGGTGGCAGCAGGGTaGGGCCTGAGCGATGGACCA +
Preference number: 4 (lower is better)
Translates to: LKAGLPTLHGVLGGLKCVGVAAG*GLSDGP
Trigger: TGGTCCATCGCTCAGGCCCCACCCTGCTGCCACCCC...CACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAGCTTTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
CDS-3UTR CCA 90 bp CTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCCCTTGGTGTGGAGGCTaGGGAAGTGGTGACGGGCTT +
Preference number: 4 (lower is better)
Translates to: LLRETSSSLGVPASLGAAPWCGG*GSGDGL
Trigger: AAGCCCGTCACCACTTCCCCAGCCTCCACACCAAGG...GGCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430793.1
3UTR CAA 72 bp CAGCATCCGGTCAATGACCACGCGCAGGGTGTCAGCTaGCACGCCAGCACAGAGCCGGGCAGTGACTGCTGT +
Preference number: 4 (lower is better)
Translates to: QHPVNDHAQGVS*HASTEPGSDCC
Trigger: ACAGCAGTCACTGCCCGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCGCGTGGTCATTGACCGGATGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR TCA 90 bp CTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCACTTCACCACCAGCTTaGGAACGTTGCGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LLRETSSSLGVPASLGAATSPPA*ERCGQQ
Trigger: CTGCTGCCCGCAACGTTCTCAAGCTGGTGGTGAAGT...GGCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCAACCAGCCCTCGGGGGTaGGGTACAGCGGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: DTARCPGRSEVRGSQHPSTSPRG*GTAGPP
Trigger: TGGAGGCCCCGCTGTACCTCACCCCCGAGGGCTGGT...TGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GAACCTCTGGCTAGACCACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGCAACCAGCCCTCGGGGGTaGGGTACAGCGGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: EPLARPHVVWRKQWMPMATSPRG*GTAGPP
Trigger: TGGAGGCCCCGCTGTACCTCACCCCCGAGGGCTGGT...TGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCAGAGGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGAGTGTCGAGGTGCCTaGGTTCTGCCCCTTCGTGGA +
Preference number: 4 (lower is better)
Translates to: EEGASEGDQLFPWGASQPECRGA*VLPLRG
Trigger: TCCACGAAGGGGCAGAACTCAGGCACCTCGACACTC...AGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp ATGACCACGCGCAGGGTGTCAGCTTGCACGCCAGCACAGAGCCGGGCAGTGACTGAGTGTCGAGGTGCCTaGGTTCTGCCCCTTCGTGGA +
Preference number: 4 (lower is better)
Translates to: MTTRRVSACTPAQSRAVTECRGA*VLPLRG
Trigger: TCCACGAAGGGGCAGAACTCAGGCACCTCGACACTC...AGTCACTGCCCGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCGCGTGGTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
CDS-3UTR TCA 90 bp CTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCGAGTGTCGAGGTGCCTaGGTTCTGCCCCTTCGTGGA +
Preference number: 4 (lower is better)
Translates to: LWRKGLLRETSSSLGVPAECRGA*VLPLRG
Trigger: TCCACGAAGGGGCAGAACTCAGGCACCTCGACACTC...GGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCGTGTCCTGGGAGGTCTaGAGTGCGTGGATCACAGCA +
Preference number: 4 (lower is better)
Translates to: ASEGDQLFPWGASQPGSCVSWEV*SAWITA
Trigger: TGCTGTGATCCACGCACTTCAGACCTCCCAGGACAC...GCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTACTGTCCACTGGGTGTaGGTCACAGGTCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: EEGASEGDQLFPWGASQPTVHWV*VTGRGP
Trigger: TGGGCCTCGACCTGTGACTCACACCCAGTGGACAGT...AGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCCTCTCATCACCACGGGGTTaGCGTTCACCAGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LRETSSSLGVPASLGAALSSPRG*RSPASA
Trigger: TGCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGA...GAGGGCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GGAAGCCCCATGTCTGTCCTTAGGTGGGAATTCTGGGCCTCGCTGCACGGAGGAGGGGCACCCATCTCCTaGAGGTGGGCCTGGAACCTC +
Preference number: 4 (lower is better)
Translates to: GSPMSVLRWEFWASLHGGGAPIS*RWAWNL
Trigger: GAGGTTCCAGGCCCACCTGCAGGAGATGGGTGCCCC...TCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGACATGGGGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR GCA 90 bp GGTAGAGTCCTCAAGGCCTTGCCTGTGGTCGACAGGGCCTTAGTGCCCACCAGCCTGGCCTTCCGACACTaGACGGTGTCCTGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: GRVLKALPVVDRALVPTSLAFRH*TVSWEV
Trigger: GACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAG...GCTGGTGGGCACTAAGGCCCTGTCGACCACAGGCAAGGCCTTGAGGACTCTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCGCTGCCCTCTGCCTGTaGCCTCCAGCCCTGACCCCG +
Preference number: 4 (lower is better)
Translates to: EGDDQKSVEEGASEGDQLAALCL*PPALTP
Trigger: CGGGGTCAGGGCTGGAGGGCACAGGCAGAGGGCAGC...GAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GGAAGCCCCATGTCTGTCCTTAGGTGGGAATTCTGGGCCTCGCTGCACGGAGGACTGGCATCTGCCGCCTaGGTGACCCTCCTCGGACTG +
Preference number: 4 (lower is better)
Translates to: GSPMSVLRWEFWASLHGGLASAA*VTLLGL
Trigger: CAGTCCGAGGAGGGTCACGCAGGCGGCAGATGCCAG...TCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGACATGGGGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR CCA 90 bp CTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCTCCTGCAGGTGGGCCTaGAACCTCTGGCTAGACCAC +
Preference number: 4 (lower is better)
Translates to: LWRKGLLRETSSSLGVPASCRWA*NLWLDH
Trigger: GTGGTCTAGCCAGAGGTTCCAGGCCCACCTGCAGGA...GGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp AAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGACCCATCTCCTGCAGGTaGGCCTGGAACCTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: KGLLRETSSSLGVPASLGPISCR*AWNLWL
Trigger: TAGCCAGAGGTTCCAGGCCCACCTGCAGGAGATGGG...TCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCTCAATCAGCCAGGGCTaGAAGTCCTCCCCGAACACG +
Preference number: 4 (lower is better)
Translates to: ASEGDQLFPWGASQPGSCSISQG*KSSPNT
Trigger: CGTGTTCGGGGAGGACTTCCAGCCCTGGCTGATTGA...GCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCACTGGGGAGAAGGCAGCTaGGCCTTGGTGTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: DFKGQRQQGTSSWGPRRHWGEGS*ALVWRL
Trigger: CAGCCTCCACACCAAGGCCCAGCTGCCTTCTCCCCA...GTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGGAGGCCCACCTTTCTTaGCTTCAGGATGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: EGASEGDQLFPWGASQPGEAHLS*LQDAGC
Trigger: GCACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTC...CCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GTTGGATCCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCCTAGCTTCGGGTGCCAGCCAGCCTaGGAGCTGCCCTCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: VGSRTRAVGNRSRGFPSFGCQPA*ELPSAC
Trigger: ACAGGCAGAGGGCAGCTCCCAGGCTGGCTGGCACCC...GAAGCTAGGGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCACGGCAGGCCTCAGCCCTaGGTTTGTCACAGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: DFKGQRQQGTSSWGPRRHGRPQP*VCHSLA
Trigger: GGCCAGACTGTGACAAACCCAGGGCTGAGGCCTGCC...GTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGGGCTCAGCCTCTTCATaGGGCAGGCCTCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: CSDFKGQRQQGTSSWGPRGSASS*GRPQPW
Trigger: CCAGGGCTGAGGCCTGCCCCATGAAGAGGCTGAGCC...CCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TCAGAGCGCAGTGGCGTGATCACAGCTCACCACAGTTTTGATCTTCCCAGGCTCACCGCGCCGCCCTCCTaGCGGTACCAGGAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: SERSGVITAHHSFDLPRLTAPPS*RYQEAE
Trigger: CTCGGCCTCCTGGTACCGCCAGGAGGGCGGCGCGGT...GAGCCTGGGAAGATCAAAACTGTGGTGAGCTGTGATCACGCCACTGCGCTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR CCA 90 bp TCAAAGGCTCCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACGCGCGCGCCGAGGGGAAACTaGTGCGTGGCTCGAGCGGCT +
Preference number: 4 (lower is better)
Translates to: SKAPVSQLRSSIRSMTTRAPRGN*CVARAA
Trigger: AGCCGCTCGAGCCACGCACCAGTTTCCCCTCGGCGC...GCGCGTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCCTTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR CCA 90 bp CAGGTTCTTCAGGGAGAAGGGCTGCGTGGAAAAGCGGATATAGCTGTCGCGGTAGAGGCGCCCTGGGCGTaGGTGCCTGGGACCAGCGTC +
Preference number: 4 (lower is better)
Translates to: QVLQGEGLRGKADIAVAVEAPWA*VPGTSV
Trigger: GACGCTGGTCCCAGGCACCCACGCCCAGGGCGCCTC...TACCGCGACAGCTATATCCGCTTTTCCACGCAGCCCTTCTCCCTGAAGAACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431204.5
CDS-3UTR CCA 90 bp CACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGCATGAGTTCTCCAGGTGCGTATCCGAGGCGCCCTaGGCGTGGGTGCCTGGGACC +
Preference number: 4 (lower is better)
Translates to: HMLSGGSSGCRWHEFSRCVSEAP*AWVPGT
Trigger: GGTCCCAGGCACCCACGCCCAGGGCGCCTCGGATAC...GCACCTGGAGAACTCATGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000431204.5
CDS-3UTR CCA 90 bp TCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGTCCCCAGAGCCTCGCTaGGTCAGCAGAGGGACTGCT +
Preference number: 4 (lower is better)
Translates to: SDFKGQRQQGTSSWGPRRSPEPR*VSRGTA
Trigger: AGCAGTCCCTCTGCTGACCCAGCGAGGCTCTGGGGA...CCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430793.1
ENST00000473661.5
CDS-3UTR TCA 90 bp GATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTACCAGCCCTCGGGGGTaGGGTACAGCGGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: DDQKSVEEGASEGDQLFPTSPRG*GTAGPP
Trigger: TGGAGGCCCCGCTGTACCTCACCCCCGAGGGCTGGT...AGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCACTCACAGCGCTGGACCTaGGTGTCGAGGTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: DFKGQRQQGTSSWGPRRHSQRWT*VSRCLS
Trigger: ACTCAGGCACCTCGACACTCAGGTCCAGCGCTGTGA...GTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR TCA 90 bp CTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCTGGATGCCGATGGCATaGGTTCTCCAGGTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LLRETSSSLGVPASLGAAWMPMA*VLQVLL
Trigger: CAGAAGCACCTGGAGAACTCATGCCATCGGCATCCA...GGCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp CCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCGTGTCCTGGGAGGTCTaGAGTGCGTGGATCACAGCA +
Preference number: 4 (lower is better)
Translates to: PTSKGRGNKALPAGGLGGVSWEV*SAWITA
Trigger: TGCTGTGATCCACGCACTTCAGACCTCCCAGGACAC...GCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR TCA 90 bp CGTGCTCAGCACTGTCCACTGGGTGTGAGTCACAGGTCGAGGCCCACCTTTCTTCACAGAGCCGGGCAGTaGCTGCTGTGGAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: RAQHCPLGVSHRSRPTFLHRAGQ*LLWRVP
Trigger: TGGCACCCTCCACAGCAGTCACTGCCCGGCTCTGTG...AAGAAAGGTGGGCCTCGACCTGTGACTCACACCCAGTGGACAGTGCTGAGCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
CDS-3UTR TCA 90 bp CTCAAAGCTGGCCTTCCGACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGCCAGCATCCGGTCAATaGCCACGCGCAGGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: LKAGLPTLHGVLGGLKCVPASGQ*PRAGCQ
Trigger: CTGACACCCTGCGCGTGGTCATTGACCGGATGCTGG...CACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAGCTTTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR TCA 90 bp ACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCACACCAGCATCCGGTCAATaGCCACGCGCAGGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: TSKGRGNKALPAGGLGGTPASGQ*PRAGCQ
Trigger: CTGACACCCTGCGCGTGGTCATTGACCGGATGCTGG...TGTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR TCA 90 bp CTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCTGCTGGGTGCCACCTTaGAATCAAGGTTCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LLRETSSSLGVPASLGAACWVPP*NQGSVG
Trigger: TCCCACCGAACCTTGATTTCAAGGTGGCACCCAGCA...GGCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCGAGGTGCCTGAGTTCTaGCCCTTCGTGGACCACTTG +
Preference number: 4 (lower is better)
Translates to: LWRKGLLRETSSSLGVPAEVPEF*PFVDHL
Trigger: CAAGTGGTCCACGAAGGGGCAGAACTCAGGCACCTC...GGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp TCTGTCCTTAGGTGGGAATTCTGGGCCTCGCTGCACGGAGGAGCTGCTGATGGCACGGCCTGCAGCTGCTaGAGGATGTCCTCACAGCGC +
Preference number: 4 (lower is better)
Translates to: SVLRWEFWASLHGGAADGTACSC*RMSSQR
Trigger: GCGCTGTGAGGACATCCTGCAGCAGCTGCAGGCCGT...GCCATCAGCAGCTCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR GCA 90 bp AGCTGGCCTTCCGACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGATCATGGGGTACCACGGCCTaGAGCTGCTGCAGGATGTCC +
Preference number: 4 (lower is better)
Translates to: SWPSDTARCPGRSEVRGSWGTTA*SCCRMS
Trigger: GGACATCCTGCAGCAGCTGCAGGCCGTGGTACCCCA...TGATCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CGGTGTCCTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCATGCCAGGCAGGGGCACCCATCTCCTaGAGGTGGGCCTGGAACCTC +
Preference number: 4 (lower is better)
Translates to: RCPGRSEVRGSQHPSCQAGAPIS*RWAWNL
Trigger: GAGGTTCCAGGCCCACCTGCAGGAGATGGGTGCCCC...TGCCTGGCATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGACACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GGAAGCCCCATGTCTGTCCTTAGGTGGGAATTCTGGGCCTCGCTGCACGGAGGACTGGCCTTCCGACACTaGACGGTGTCCTGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: GSPMSVLRWEFWASLHGGLAFRH*TVSWEV
Trigger: GACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAG...TCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGACATGGGGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR GCA 90 bp TGCGATCCCCTTCCATGTCTATCTGGGGTACCACGGCCTGCAGCTGCTGCAGGAGAGCCGGGCAGTGACTaGTGTGGAGGGTGCCATCGT +
Preference number: 4 (lower is better)
Translates to: CDPLPCLSGVPRPAAAAGEPGSD*CGGCHR
Trigger: ACGATGGCACCCTCCACAGCAGTCACTGCCCGGCTC...TCCTGCAGCAGCTGCAGGCCGTGGTACCCCAGATAGACATGGAAGGGGATCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000430390.5
CDS-3UTR GCA 90 bp TGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGCTGGGAGGCGGAGCTTaGAGTGAGCCAAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: CSDFKGQRQQGTSSWGPRLGGGA*SEPRSR
Trigger: GCGCGATCTTGGCTCACTGCAAGCTCCGCCTCCCAG...CCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR GCA 90 bp CAGGTCCTTGTCGATGTCCATGTGGGCCAAGTTGCTAAGGTACTCCTCGCACGCGCTTCCGCAGCCAGTTaGACACCGCGCCGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: QVLVDVHVGQVAKVLLARASAAS*TPRRPP
Trigger: AGGAGGGCGGCGCGGTGTGCAACTGGCTGCGGAAGC...GCGTGCGAGGAGTACCTTAGCAACTTGGCCCACATGGACATCGACAAGGACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR CCA 90 bp AAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGACCTTCCATGTCTATCTaGGGTACCACGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KGLLRETSSSLGVPASLGPSMSI*GTTACS
Trigger: GCTGCAGGCCGTGGTACCCCAGATAGACATGGAAGG...TCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TCTGTCCTTAGGTGGGAATTCTGGGCCTCGCTGCACGGAGGAGCTGCTGATGGCCTCGTCCGCGGGACTTaGCTCCTGGCTTCACGATCC +
Preference number: 4 (lower is better)
Translates to: SVLRWEFWASLHGGAADGLVRGT*LLASRS
Trigger: GGATCGTGAAGCCAGGAGCCAAGTCCCGCGGACGAG...GCCATCAGCAGCTCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp GACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCACTCCTGCAGGTGGGCCTaGAACCTCTGGCTAGACCAC +
Preference number: 4 (lower is better)
Translates to: DFKGQRQQGTSSWGPRRHSCRWA*NLWLDH
Trigger: GTGGTCTAGCCAGAGGTTCCAGGCCCACCTGCAGGA...GTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CAGTTGCGGTCCAGCATCCGGTCAATGACCACGCGCAGGGTGTCAGCTTGCACGCCCATCTCCTGCAGGTaGGCCTGGAACCTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: QLRSSIRSMTTRRVSACTPISCR*AWNLWL
Trigger: TAGCCAGAGGTTCCAGGCCCACCTGCAGGAGATGGG...CGTGCAAGCTGACACCCTGCGCGTGGTCATTGACCGGATGCTGGACCGCAACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCATAGAGCTCAAAGCTaGCCTTCCGACACTGCACGG +
Preference number: 4 (lower is better)
Translates to: ASEGDQLFPWGASQPGSCHRAQS*PSDTAR
Trigger: CCGTGCAGTGTCGGAAGGCCAGCTTTGAGCTCTATG...GCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCTCAATCAGCCAGGGCTaGAAGTCCTCCCCGAACACG +
Preference number: 4 (lower is better)
Translates to: PTSKGRGNKALPAGGLGGSISQG*KSSPNT
Trigger: CGTGTTCGGGGAGGACTTCCAGCCCTGGCTGATTGA...GCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp AGCTGGCCTTCCGACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGATCACCTTGGTGTGGAGGCTaGGGAAGTGGTGACGGGCTG +
Preference number: 4 (lower is better)
Translates to: SWPSDTARCPGRSEVRGSPWCGG*GSGDGL
Trigger: CAGCCCGTCACCACTTCCCCAGCCTCCACACCAAGG...TGATCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CAAAGCTGGCCTTCCGACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGATGGGGAGAAGGCAGCTaGGCCTTGGTGTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: QSWPSDTARCPGRSEVRGWGEGS*ALVWRL
Trigger: CAGCCTCCACACCAAGGCCCAGCTGCCTTCTCCCCA...TCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CAGGCCAGGGGATACCCTGCTCAGCCCCTAGGCTTGAGGCCTGTTCTGGTTCCAGCTCCTGTTTCAGGCTaGTCACGGTGGCTGACGCCT +
Preference number: 4 (lower is better)
Translates to: QARGYPAQPLGLRPVLVPAPVSG*SRWLTP
Trigger: AGGCGTCAGCCACCGTGACCAGCCTGAAACAGGAGC...TGGAACCAGAACAGGCCTCAAGCCTAGGGGCTGAGCAGGGTATCCCCTGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
CDS-3UTR CCA 90 bp CGGTCAATGACCACGCGCAGGGTGTCAGCTTGCACGCCAGCACAGAGCCGGGCATCGCTGATGGGTCCCTaGATTACAGGACTAGGAGCC +
Preference number: 4 (lower is better)
Translates to: RSMTTRRVSACTPAQSRASLMGP*ITGLGA
Trigger: GGCTCCTAGTCCTGTAATCCAGGGACCCATCAGCGA...TGCCCGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCGCGTGGTCATTGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR CCA 90 bp TCCCTAGCTTCATATCCCCCAGGCCCCTGCGCCTCTGGAATGTACCAACAAGGGCAAGGCACTTCCAGCTaGGGGCCTCGGAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: SLASYPPGPCASGMYQQGQGTSS*GPRRHR
Trigger: CCTGTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTG...CCCTTGTTGGTACATTCCAGAGGCGCAGGGGCCTGGGGGATATGAAGCTAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR CCA 90 bp CAAAGCTGGCCTTCCGACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGAGGCAGGCCTCAGCCCTaGGTTTGTCACAGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: QSWPSDTARCPGRSEVRGGRPQP*VCHSLA
Trigger: GGCCAGACTGTGACAAACCCAGGGCTGAGGCCTGCC...TCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAGCTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CTGCCCCTTCGTGGACCACTTGGTAGTAGCGCTGGAGGAAGAGGGACCAGCCCTAGGCCCCTGCGCCTCTaGAATGTACCAACAAGGGGC +
Preference number: 4 (lower is better)
Translates to: LPLRGPLGSSAGGRGTSPRPLRL*NVPTRG
Trigger: GCCCCTTGTTGGTACATTCCAGAGGCGCAGGGGCCT...AGGGCTGGTCCCTCTTCCTCCAGCGCTACTACCAAGTGGTCCACGAAGGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR CCA 90 bp GAACCTCTGGCTAGACCACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGCAGGGGTGGCAGCAGGGTaGGGCCTGAGCGATGGACCA +
Preference number: 4 (lower is better)
Translates to: EPLARPHVVWRKQWMPMAGVAAG*GLSDGP
Trigger: TGGTCCATCGCTCAGGCCCCACCCTGCTGCCACCCC...TGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCAGAGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
CDS-3UTR CCA 90 bp AAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCCGCGCTCAGGAGCAGTaGCGCGTCGGGGCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: KREMIRSLWRKGLLRETSRAQEQ*RVGALH
Trigger: ATGCAGGGCCCCGACGCGCCACTGCTCCTGAGCGCG...GCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR CCA 90 bp GGCTTCCCTAGCTTCATATCCCCCAGGCCCCTGCGCCTCTGGAATGTACCAACACTGGGCGTGGGTGCCTaGGACCAGCGTCTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: GFPSFISPRPLRLWNVPTLGVGA*DQRLEG
Trigger: GCCTTCAAGACGCTGGTCCCAGGCACCCACGCCCAG...TGTTGGTACATTCCAGAGGCGCAGGGGCCTGGGGGATATGAAGCTAGGGAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR CCA 90 bp GAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCAGCAGAGGGACTGCTaGGCGGACCCCCATCCGCCG +
Preference number: 4 (lower is better)
Translates to: EEGDDQKSVEEGASEGDQQQRDC*ADPHPP
Trigger: CGGCGGATGGGGGTCCGCCCAGCAGTCCCTCTGCTG...CTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TCTGTCCTTAGGTGGGAATTCTGGGCCTCGCTGCACGGAGGAGCTGCTGATGGCTCCCCAGAGCCTCGCTaGGTCAGCAGAGGGACTGCT +
Preference number: 4 (lower is better)
Translates to: SVLRWEFWASLHGGAADGSPEPR*VSRGTA
Trigger: AGCAGTCCCTCTGCTGACCCAGCGAGGCTCTGGGGA...GCCATCAGCAGCTCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426895.9
3UTR CAA 72 bp CCCTCGGGGGTGAGGTACAGCGGGGCCTCCAGGTCCTaGTCGATGTCCATGTGGGCCAAGTTGCTAAGGTAC +
Preference number: 4 (lower is better)
Translates to: PSGVRYSGASRS*SMSMWAKLLRY
Trigger: GTACCTTAGCAACTTGGCCCACATGGACATCGACAAGGACCTGGAGGCCCCGCTGTACCTCACCCCCGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR TCA 90 bp GCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCGTTGCACAGGTGCACTaGGTTGTCCAGGTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: ASEGDQLFPWGASQPGSCVAQVH*VVQVLQ
Trigger: CTGAAGAACCTGGACAACTCAGTGCACCTGTGCAAC...GCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp ATGACCACGCGCAGGGTGTCAGCTTGCACGCCAGCACAGAGCCGGGCAGTGACTTGGATGCCGATGGCATaGGTTCTCCAGGTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: MTTRRVSACTPAQSRAVTWMPMA*VLQVLL
Trigger: CAGAAGCACCTGGAGAACTCATGCCATCGGCATCCA...AGTCACTGCCCGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCGCGTGGTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTCCCCTCCCCCAAGTCTaGCACAGCTTCTTAAGTCCA +
Preference number: 4 (lower is better)
Translates to: EEGASEGDQLFPWGASQPPLPQV*HSFLSP
Trigger: TGGACTTAAGAAGCTGTGTCAGACTTGGGGGAGGGG...AGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGATCAAGGCAGGTAACCTaGCGCATGCCACAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: VPTSKGRGNKALPAGGLGSRQVT*RMPQPP
Trigger: TGGGGGCTGTGGCATGCGTCAGGTTACCTGCCTTGA...TCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR TCA 90 bp AAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGACCTCTGCAGAAGGGCTaGGGTTTAGGCAAGGCCAAT +
Preference number: 4 (lower is better)
Translates to: KGLLRETSSSLGVPASLGPLQKG*GLGKAN
Trigger: ATTGGCCTTGCCTAAACCTCAGCCCTTCTGCAGAGG...TCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR TCA 90 bp CTCAAAGCTGGCCTTCCGACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGCAGCAGGGTGGGGCCTaGGCGATGGACCATCTTCTT +
Preference number: 4 (lower is better)
Translates to: LKAGLPTLHGVLGGLKCVQQGGA*AMDHLL
Trigger: AAGAAGATGGTCCATCGCTCAGGCCCCACCCTGCTG...CACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAGCTTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
CDS-3UTR TCA 90 bp CTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCCTCCAGGCTGCTTATAGATaGGCTCAAAGGCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: LRETSSSLGVPASLGAALQAAYR*AQRLLC
Trigger: ACACAGGAGCCTTTGAGCTCATCTATAAGCAGCCTG...GAGGGCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp ATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGAGGCTGGGGAAGTGGTaGCGGGCTGGGTCTGCATCC +
Preference number: 4 (lower is better)
Translates to: IRSLWRKGLLRETSSSLGRLGKW*RAGSAS
Trigger: GGATGCAGACCCAGCCCGTCACCACTTCCCCAGCCT...CCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp TTTGGTGTTGGATCCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCCTAGGCTGGGGAAGTGGTaGCGGGCTGGGTCTGCATCC +
Preference number: 4 (lower is better)
Translates to: FGVGSRTRAVGNRSRGFPRLGKW*RAGSAS
Trigger: GGATGCAGACCCAGCCCGTCACCACTTCCCCAGCCT...AGGGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAACACCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR GCA 90 bp CTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCCTGGGAGGTCTGAAGTaGGTGGATCACAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: LLRETSSSLGVPASLGAALGGLK*VDHSIL
Trigger: AAGGATGCTGTGATCCACGCACTTCAGACCTCCCAG...GGCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGCTGGGAGGTCTGAAGTaGGTGGATCACAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: EGASEGDQLFPWGASQPGLGGLK*VDHSIL
Trigger: AAGGATGCTGTGATCCACGCACTTCAGACCTCCCAG...CCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GGCGGAAGCAGTGGATGCCGATGGCATGAGTTCTCCAGGTGCTTCTGGATGGAGCTGGCCTTCCGACACTaGACGGTGTCCTGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: GGSSGCRWHEFSRCFWMELAFRH*TVSWEV
Trigger: GACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAG...CTCCATCCAGAAGCACCTGGAGAACTCATGCCATCGGCATCCACTGCTTCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GAGCTCAAAGGCTCCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACCGCAGGGTGTCAGCTTaGACGCCAGCACAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: ELKGSCVTVAVQHPVNDHRRVSA*TPAQSR
Trigger: CCGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCG...GTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCCTTTGAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGCATGAGTTCTCCAGGTGCCGCAGGGTGTCAGCTTaGACGCCAGCACAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: HMLSGGSSGCRWHEFSRCRRVSA*TPAQSR
Trigger: CCGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCG...GCACCTGGAGAACTCATGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCAGGCCCTCAAACCCCTaGAGCCTGACCTATACCATA +
Preference number: 4 (lower is better)
Translates to: LLRETSSSLGVPASLGAARPSNP*SLTYTI
Trigger: TATGGTATAGGTCAGGCTGCAGGGGTTTGAGGGCCT...GGCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGTGTCACTCGAGGCTCTaGCCTAAATGTCCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: VEEGASEGDQLFPWGASQCHSRL*PKCPQG
Trigger: GCCTTGGGGACATTTAGGGCAGAGCCTCGAGTGACA...CTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR GCA 90 bp CTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCTGCAACTCTAGCACTTaGCCTTGGCTCCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: LWRKGLLRETSSSLGVPACNSST*PWLPLS
Trigger: GGACAGTGGGAGCCAAGGGCAAGTGCTAGAGTTGCA...GGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR GCA 90 bp CAAAGCTGGCCTTCCGACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGAGAGTCCTCAAGGCCTTaGCTGTGGTCGACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: QSWPSDTARCPGRSEVRGESSRP*LWSTGP
Trigger: AGGCCCTGTCGACCACAGGCAAGGCCTTGAGGACTC...TCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAGCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR GCA 90 bp TGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGGAGTCCTCAAGGCCTTaGCTGTGGTCGACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: CSDFKGQRQQGTSSWGPRESSRP*LWSTGP
Trigger: AGGCCCTGTCGACCACAGGCAAGGCCTTGAGGACTC...CCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GAACCTCTGGCTAGACCACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGCACCAGCCCTGACCCCGTaGTCAGCACTGTCCACTGGG +
Preference number: 4 (lower is better)
Translates to: EPLARPHVVWRKQWMPMAPALTP*SALSTG
Trigger: CCCAGTGGACAGTGCTGAGCACGGGGTCAGGGCTGG...TGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCAGAGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GTCCTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCATGCCAGGCACGATGCTCTTCCCTTGGGGTaGCAGCCAGCCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VLGGLKCVDHSILHARHDALPLG*QPAWEL
Trigger: CAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGC...ATCGTGCCTGGCATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
CDS-3UTR GCA 90 bp TCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGTATCCCCCAGGCCCCTaGGCCTCTGGAATGTACCAA +
Preference number: 4 (lower is better)
Translates to: SDFKGQRQQGTSSWGPRRYPPGP*ASGMYQ
Trigger: TTGGTACATTCCAGAGGCGCAGGGGCCTGGGGGATA...CCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCGGGCCTCACCATCCTaGGGAGAGGGGTCGAGGACC +
Preference number: 4 (lower is better)
Translates to: EEGDDQKSVEEGASEGDQRASPS*GEGSRT
Trigger: GGTCCTCGACCCCTCTCCGCAGGATGGTGAGGCCCG...CTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR GCA 90 bp GTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCTACCAGGAGCCGGATaGCCACATATTGAGGCACCT +
Preference number: 4 (lower is better)
Translates to: VEEGASEGDQLFPWGASQLPGAG*PHIEAP
Trigger: AGGTGCCTCAATATGTGGGCATCCGGCTCCTGGTAG...CTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCGGTCAGCAGAGGGACTaGTGGGCGGACCCCCATCCG +
Preference number: 4 (lower is better)
Translates to: GDDQKSVEEGASEGDQLFGQQRD*WADPHP
Trigger: CGGATGGGGGTCCGCCCAGCAGTCCCTCTGCTGACC...GAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp ATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGGGTCCCCGAGTCCTTaGCTTCCCCAGAGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: IRSLWRKGLLRETSSSLGGSPSP*LPQSLA
Trigger: AGCGAGGCTCTGGGGAAGGCAAGGACTCGGGGACCC...CCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGAT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000443148.5
CDS-3UTR CCA 90 bp AAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCGGGACTTGGCTCCTaGCTTCACGATCCAGATGTT +
Preference number: 4 (lower is better)
Translates to: KGLLRETSSSLGVPASLGAGLGS*LHDPDV
Trigger: AACATCTGGATCGTGAAGCCAGGAGCCAAGTCCCGC...TCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CCAGATGTTGCGATCCCCTTCCATGTCTATCTGGGGTACCACGGCCTGCAGCTGCTCGTCCGCGGGACTTaGCTCCTGGCTTCACGATCC +
Preference number: 4 (lower is better)
Translates to: PDVAIPFHVYLGYHGLQLLVRGT*LLASRS
Trigger: GGATCGTGAAGCCAGGAGCCAAGTCCCGCGGACGAG...CAGCTGCAGGCCGTGGTACCCCAGATAGACATGGAAGGGGATCGCAACATCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000430390.5
CDS-3UTR CCA 90 bp CTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCGGGAGAAGGGCTGCGTaGAAAAGCGGATATAGCTGT +
Preference number: 4 (lower is better)
Translates to: LLRETSSSLGVPASLGAAGRRAA*KSGYSC
Trigger: ACAGCTATATCCGCTTTTCCACGCAGCCCTTCTCCC...GGCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000430793.1
ENST00000443148.5
CDS-3UTR CCA 90 bp GAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTAGACCACATGTTGTCTaGCGGAAGCAGTGGATGCCG +
Preference number: 4 (lower is better)
Translates to: EEGASEGDQLFPWGASQPRPHVV*RKQWMP
Trigger: CGGCATCCACTGCTTCCGCCAGACAACATGTGGTCT...AGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCTGGGCCTGGAACCTCTaGCTAGACCACATGTTGTCT +
Preference number: 4 (lower is better)
Translates to: ASEGDQLFPWGASQPGSCWAWNL*LDHMLS
Trigger: AGACAACATGTGGTCTAGCCAGAGGTTCCAGGCCCA...GCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TCTGTCCTTAGGTGGGAATTCTGGGCCTCGCTGCACGGAGGAGCTGCTGATGGCCCCATCTCCTGCAGGTaGGCCTGGAACCTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: SVLRWEFWASLHGGAADGPISCR*AWNLWL
Trigger: TAGCCAGAGGTTCCAGGCCCACCTGCAGGAGATGGG...GCCATCAGCAGCTCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp TTCTGCACCACCCACTTGCCGTCCTTCATCACCACGGGGTTGCCGTTCACCAGCCCCATCTCCTGCAGGTaGGCCTGGAACCTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: FCTTHLPSFITTGLPFTSPISCR*AWNLWL
Trigger: TAGCCAGAGGTTCCAGGCCCACCTGCAGGAGATGGG...GCTGGTGAACGGCAACCCCGTGGTGATGAAGGACGGCAAGTGGGTGGTGCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000431204.5
CDS-3UTR CCA 90 bp TTCTCTCTGGCAGACTTGCTGGCCTCCAGTGTAGCCCGCACCTCCCAGGCTCTCGGTGGACCAAGCATTTaGGGCACCCATCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: FSLADLLASSVARTSQALGGPSI*GTHLLQ
Trigger: CTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACC...GAGAGCCTGGGAGGTGCGGGCTACACTGGAGGCCAGCAAGTCTGCCAGAGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CCA 90 bp GTTGGATCCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCCTAGCTTCCCTTGGTGTGGAGGCTaGGGAAGTGGTGACGGGCTG +
Preference number: 4 (lower is better)
Translates to: VGSRTRAVGNRSRGFPSFPWCGG*GSGDGL
Trigger: CAGCCCGTCACCACTTCCCCAGCCTCCACACCAAGG...GAAGCTAGGGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TACAGCGGGGCCTCCAGGTCCTTGTCGATGTCCATGTGGGCCAAGTTGCTAAGGTGGGGAGAAGGCAGCTaGGCCTTGGTGTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: YSGASRSLSMSMWAKLLRWGEGS*ALVWRL
Trigger: CAGCCTCCACACCAAGGCCCAGCTGCCTTCTCCCCA...CCTTAGCAACTTGGCCCACATGGACATCGACAAGGACCTGGAGGCCCCGCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR CCA 90 bp TGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGCTGAGGACCTGGCCCTaGTGTCGGAGTACATGGGGA +
Preference number: 4 (lower is better)
Translates to: CSDFKGQRQQGTSSWGPRLRTWP*CRSTWG
Trigger: TCCCCATGTACTCCGACACCAGGGCCAGGTCCTCAG...CCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCGGGTGCCAGCCAGCCTaGGAGCTGCCCTCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: GDDQKSVEEGASEGDQLFGCQPA*ELPSAC
Trigger: ACAGGCAGAGGGCAGCTCCCAGGCTGGCTGGCACCC...GAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GAACCTCTGGCTAGACCACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGCAGACCAGCTCTTCCCTTaGGGTGCCAGCCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: EPLARPHVVWRKQWMPMADQLFP*GASQPG
Trigger: CCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTC...TGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCAGAGGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CAGGTCGAGGCCCACCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAATCCAAGGCACTTCCAGCTaGGGGCCTCGGAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: QVEAHLSWLQDAGCHLEIQGTSS*GPRRHR
Trigger: CCTGTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTG...GATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTCGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GGCGGAAGCAGTGGATGCCGATGGCATGAGTTCTCCAGGTGCTTCTGGATGGAGGGCAGGCCTCAGCCCTaGGTTTGTCACAGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: GGSSGCRWHEFSRCFWMEGRPQP*VCHSLA
Trigger: GGCCAGACTGTGACAAACCCAGGGCTGAGGCCTGCC...CTCCATCCAGAAGCACCTGGAGAACTCATGCCATCGGCATCCACTGCTTCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TCCCTAGCTTCATATCCCCCAGGCCCCTGCGCCTCTGGAATGTACCAACAAGGGGGCAGGCCTCAGCCCTaGGTTTGTCACAGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: SLASYPPGPCASGMYQQGGRPQP*VCHSLA
Trigger: GGCCAGACTGTGACAAACCCAGGGCTGAGGCCTGCC...CCCTTGTTGGTACATTCCAGAGGCGCAGGGGCCTGGGGGATATGAAGCTAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR CCA 90 bp GGCTCCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACGCGCAGGGTGTGGGGCCTGAGCGATaGACCATCTTCTTCTCCACC +
Preference number: 4 (lower is better)
Translates to: GSCVTVAVQHPVNDHAQGVGPER*TIFFST
Trigger: GGTGGAGAAGAAGATGGTCCATCGCTCAGGCCCCAC...ACCCTGCGCGTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000430390.5
CDS-3UTR CCA 90 bp CTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCATGCCAGGCACGATGATTGGCAGCCTCCTGGGTaGACGGAACTCGGAGCGGCG +
Preference number: 4 (lower is better)
Translates to: LGGLKCVDHSILHARHDDWQPPG*TELGAA
Trigger: CGCCGCTCCGAGTTCCGTCCACCCAGGAGGCTGCCA...ATCATCGTGCCTGGCATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR CCA 90 bp ATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCCCCATGGCAGCCTCCTaGGTGGACGGAACTCGGAGC +
Preference number: 4 (lower is better)
Translates to: IVPTSKGRGNKALPAGGLPMAAS*VDGTRS
Trigger: GCTCCGAGTTCCGTCCACCCAGGAGGCTGCCATGGG...GAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR CCA 90 bp GTCCTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCATGCCAGGCACGATCTGGGCGTGGGTGCCTaGGACCAGCGTCTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: VLGGLKCVDHSILHARHDLGVGA*DQRLEG
Trigger: GCCTTCAAGACGCTGGTCCCAGGCACCCACGCCCAG...ATCGTGCCTGGCATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000431204.5
CDS-3UTR CCA 90 bp CGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTGAGGCGCCCTGGGCGTaGGTGCCTGGGACCAGCGTC +
Preference number: 4 (lower is better)
Translates to: RQVLGIVPTSKGRGNKALEAPWA*VPGTSV
Trigger: GACGCTGGTCCCAGGCACCCACGCCCAGGGCGCCTC...AAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR CCA 90 bp GGCCAATTCCTTCCCCTGTCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTCAGCAGAGGGACTGCTaGGCGGACCCCCATCCGCCG +
Preference number: 4 (lower is better)
Translates to: GQFLPLSHGINVPMPGRCQQRDC*ADPHPP
Trigger: CGGCGGATGGGGGTCCGCCCAGCAGTCCCTCTGCTG...ACACCTACCGGGCATAGGAACGTTAATGCCATGAGACAGGGGAAGGAATTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426895.9
3UTR CAA 72 bp TGCACCACCCACTTGCCGTCCTTCATCACCACGGGGTaGCCGTTCACCAGCTTCAGCATCTCCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: CTTHLPSFITTG*PFTSFSISSRW
Trigger: CCACCTGGAGGAGATGCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGAAGGACGGCAAGTGGGTGGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430390.5
CDS-3UTR TCA 90 bp ACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCACCAGCCCTCGGGGGTaGGGTACAGCGGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: TGARNCSDFKGQRQQGTSTSPRG*GTAGPP
Trigger: TGGAGGCCCCGCTGTACCTCACCCCCGAGGGCTGGT...GGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR TCA 90 bp AAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGTTGCACAGGTGCACTaGGTTGTCCAGGTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: KGLLRETSSSLGVPASLGVAQVH*VVQVLQ
Trigger: CTGAAGAACCTGGACAACTCAGTGCACCTGTGCAAC...TCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCACTGGATGCCGATGGCATaGGTTCTCCAGGTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: DFKGQRQQGTSSWGPRRHWMPMA*VLQVLL
Trigger: CAGAAGCACCTGGAGAACTCATGCCATCGGCATCCA...GTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR TCA 90 bp AAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGATCATGCCAGGCACGATaGTGGTGGACCAAGCATTTG +
Preference number: 4 (lower is better)
Translates to: KGLLRETSSSLGVPASLGSCQAR*WWTKHL
Trigger: CAAATGCTTGGTCCACCATCATCGTGCCTGGCATGA...TCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GGAAGCCCCATGTCTGTCCTTAGGTGGGAATTCTGGGCCTCGCTGCACGGAGGAGTGTCCTGGGAGGTCTaGAGTGCGTGGATCACAGCA +
Preference number: 4 (lower is better)
Translates to: GSPMSVLRWEFWASLHGGVSWEV*SAWITA
Trigger: TGCTGTGATCCACGCACTTCAGACCTCCCAGGACAC...TCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGACATGGGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR TCA 90 bp CCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACCCATCTCCTGCAGGTGGGTGTCCTGGGAGGTCTaGAGTGCGTGGATCACAGCA +
Preference number: 4 (lower is better)
Translates to: PGTMMVDQAFGAPISCRWVSWEV*SAWITA
Trigger: TGCTGTGATCCACGCACTTCAGACCTCCCAGGACAC...CCACCTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR TCA 90 bp CAGGTCGAGGCCCACCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAATCCCAGCATCCGGTCAATaGCCACGCGCAGGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: QVEAHLSWLQDAGCHLEIPASGQ*PRAGCQ
Trigger: CTGACACCCTGCGCGTGGTCATTGACCGGATGCTGG...GATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTCGACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
CDS-3UTR TCA 90 bp AGGTGCACTGAGTTGTCCAGGTTCTTCAGGGAGAAGGGCTGCGTGGAAAAGCGGTGCTGTGCTGTCGTCTaGGGACCTGGCCCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: RCTELSRFFREKGCVEKRCCAVV*GPGPGV
Trigger: GACACCAGGGCCAGGTCCTCAGACGACAGCACAGCA...CCGCTTTTCCACGCAGCCCTTCTCCCTGAAGAACCTGGACAACTCAGTGCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430390.5
CDS-3UTR TCA 90 bp GAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTGCTGTGCTGTCGTCTaGGGACCTGGCCCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: EGDDQKSVEEGASEGDQLCCAVV*GPGPGV
Trigger: GACACCAGGGCCAGGTCCTCAGACGACAGCACAGCA...GAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGATCCTCCTCAGAGACCTaGACTCCTCACAGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: VPTSKGRGNKALPAGGLGSSSET*TPHRQG
Trigger: TCCCTGCCTGTGAGGAGTTCAGGTCTCTGAGGAGGA...TCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGAAGAGGGAGATaGTCAGAAGTCTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: EEGASEGDQLFPWGASQPGRRGR*SEVCGG
Trigger: TCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCC...AGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp TGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGCGACTCACTGCCACGTaGTCTTGGGTAAGCCATGCC +
Preference number: 4 (lower is better)
Translates to: CSDFKGQRQQGTSSWGPRRLTAT*SWVSHA
Trigger: GGCATGGCTTACCCAAGATCACGTGGCAGTGAGTCG...CCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR TCA 90 bp TCTGTCCTTAGGTGGGAATTCTGGGCCTCGCTGCACGGAGGAGCTGCTGATGGCCTGAGCCGGTTCATGTaGGACGCCTTGGAGGATCCT +
Preference number: 4 (lower is better)
Translates to: SVLRWEFWASLHGGAADGLSRFM*DALEDP
Trigger: AGGATCCTCCAAGGCGTCTCACATGAACCGGCTCAG...GCCATCAGCAGCTCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR TCA 90 bp CTCAAAGCTGGCCTTCCGACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGCTGAGCCGGTTCATGTaGGACGCCTTGGAGGATCCT +
Preference number: 4 (lower is better)
Translates to: LKAGLPTLHGVLGGLKCVLSRFM*DALEDP
Trigger: AGGATCCTCCAAGGCGTCTCACATGAACCGGCTCAG...CACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAGCTTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000431204.5
CDS-3UTR TCA 90 bp CAGTTGCGGTCCAGCATCCGGTCAATGACCACGCGCAGGGTGTCAGCTTGCACGGAAGTCGAACAGCTGTaGTGGCTGGAACTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: QLRSSIRSMTTRRVSACTEVEQL*WLELLV
Trigger: GACGAGGAGTTCCAGCCATCACAGCTGTTCGACTTC...CGTGCAAGCTGACACCCTGCGCGTGGTCATTGACCGGATGCTGGACCGCAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000430390.5
CDS-3UTR GCA 90 bp ACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCACAGAGGTGCCTGAGTTCTaGCCCTTCGTGGACCACTTG +
Preference number: 4 (lower is better)
Translates to: TSKGRGNKALPAGGLGGTEVPEF*PFVDHL
Trigger: CAAGTGGTCCACGAAGGGGCAGAACTCAGGCACCTC...TGTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp TTGTCTGGCGGAAGCAGTGGATGCCGATGGCATGAGTTCTCCAGGTGCTTCTGGACGGCCTGCAGCTGCTaGAGGATGTCCTCACAGCGC +
Preference number: 4 (lower is better)
Translates to: LSGGSSGCRWHEFSRCFWTACSC*RMSSQR
Trigger: GCGCTGTGAGGACATCCTGCAGCAGCTGCAGGCCGT...CCAGAAGCACCTGGAGAACTCATGCCATCGGCATCCACTGCTTCCGCCAGACAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR GCA 90 bp ATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGACGGCCTGCAGCTGCTaGAGGATGTCCTCACAGCGC +
Preference number: 4 (lower is better)
Translates to: IRSLWRKGLLRETSSSLGTACSC*RMSSQR
Trigger: GCGCTGTGAGGACATCCTGCAGCAGCTGCAGGCCGT...CCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTGGGGTACCACGGCCTaGAGCTGCTGCAGGATGTCC +
Preference number: 4 (lower is better)
Translates to: EGDDQKSVEEGASEGDQLWGTTA*SCCRMS
Trigger: GGACATCCTGCAGCAGCTGCAGGCCGTGGTACCCCA...GAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGGAGTTGTTGCACAGGTaGACTGAGTTGTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: EGASEGDQLFPWGASQPGELLHR*TELSRF
Trigger: GAACCTGGACAACTCAGTGCACCTGTGCAACAACTC...CCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp AAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCGGGGCACCCATCTCCTaGAGGTGGGCCTGGAACCTC +
Preference number: 4 (lower is better)
Translates to: KREMIRSLWRKGLLRETSGAPIS*RWAWNL
Trigger: GAGGTTCCAGGCCCACCTGCAGGAGATGGGTGCCCC...GCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp TGGAACCTCTGGCTAGACCACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGCTGGCCTTCCGACACTaGACGGTGTCCTGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: WNLWLDHMLSGGSSGCRWLAFRH*TVSWEV
Trigger: GACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAG...CCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCAGAGGTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GAACCTCTGGCTAGACCACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGCACTGGCCTTCCGACACTaGACGGTGTCCTGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: EPLARPHVVWRKQWMPMALAFRH*TVSWEV
Trigger: GACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAG...TGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCAGAGGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GGGGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGGAGCCGGGCAGTGACTaGTGTGGAGGGTGCCATCGT +
Preference number: 4 (lower is better)
Translates to: GEKREMIRSLWRKGLLREEPGSD*CGGCHR
Trigger: ACGATGGCACCCTCCACAGCAGTCACTGCCCGGCTC...CTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp TCAGAGCGCAGTGGCGTGATCACAGCTCACCACAGTTTTGATCTTCCCAGGCTCCGCAGGGTGTCAGCTTaGACGCCAGCACAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: SERSGVITAHHSFDLPRLRRVSA*TPAQSR
Trigger: CCGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCG...GAGCCTGGGAAGATCAAAACTGTGGTGAGCTGTGATCACGCCACTGCGCTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR GCA 90 bp GGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCGCAGGGTGTCAGCTTaGACGCCAGCACAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: GEEGDDQKSVEEGASEGDRRVSA*TPAQSR
Trigger: CCGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCG...GTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GCCTTAGTGCCCACCAGCTTGCTGTGCTGTCGTCTGAGGACCTGGCCCTGGTGTCTCCTGTGTCACAGTTaGGGTCCAGCATCCGGTCAA +
Preference number: 4 (lower is better)
Translates to: ALVPTSLLCCRLRTWPWCLLCHS*GPASGQ
Trigger: TTGACCGGATGCTGGACCGCAACTGTGACACAGGAG...ACACCAGGGCCAGGTCCTCAGACGACAGCACAGCAAGCTGGTGGGCACTAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GGCTTCCCTAGCTTCATATCCCCCAGGCCCCTGCGCCTCTGGAATGTACCAACACCCACCAGCTTGCTGTaGTGTCGTCTGAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: GFPSFISPRPLRLWNVPTPTSLL*CRLRTW
Trigger: CCAGGTCCTCAGACGACAGCACAGCAAGCTGGTGGG...TGTTGGTACATTCCAGAGGCGCAGGGGCCTGGGGGATATGAAGCTAGGGAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR GCA 90 bp CAGGTCGAGGCCCACCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAATCGGCCAGGGGATACCCTaGTCAGCCCCTAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: QVEAHLSWLQDAGCHLEIGQGIP*SAPRLE
Trigger: CTCAAGCCTAGGGGCTGAGCAGGGTATCCCCTGGCC...GATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTCGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
CDS-3UTR GCA 90 bp TGGAACCTCTGGCTAGACCACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGGGCCAGGGGATACCCTaGTCAGCCCCTAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: WNLWLDHMLSGGSSGCRWGQGIP*SAPRLE
Trigger: CTCAAGCCTAGGGGCTGAGCAGGGTATCCCCTGGCC...CCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCAGAGGTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
CDS-3UTR GCA 90 bp TTCTCTCTGGCAGACTTGCTGGCCTCCAGTGTAGCCCGCACCTCCCAGGCTCTCTCCTTCCTGGAGAGCTaGCTCTGCTTCCCTGAATCC +
Preference number: 4 (lower is better)
Translates to: FSLADLLASSVARTSQALSFLES*LCFPES
Trigger: GGATTCAGGGAAGCAGAGGCAGCTCTCCAGGAAGGA...GAGAGCCTGGGAGGTGCGGGCTACACTGGAGGCCAGCAAGTCTGCCAGAGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR GCA 90 bp CGTGCTCAGCACTGTCCACTGGGTGTGAGTCACAGGTCGAGGCCCACCTTTCTTCACCCGAGGCCCTTGTaGCCCTTATCCTGGCACACA +
Preference number: 4 (lower is better)
Translates to: RAQHCPLGVSHRSRPTFLHPRPL*PLSWHT
Trigger: TGTGTGCCAGGATAAGGGGCACAAGGGCCTCGGGTG...AAGAAAGGTGGGCCTCGACCTGTGACTCACACCCAGTGGACAGTGCTGAGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCCAGCCCTGACCCCGTaGTCAGCACTGTCCACTGGG +
Preference number: 4 (lower is better)
Translates to: EEGDDQKSVEEGASEGDQPALTP*SALSTG
Trigger: CCCAGTGGACAGTGCTGAGCACGGGGTCAGGGCTGG...CTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp ACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCATCCAGCCCTGACCCCGTaGTCAGCACTGTCCACTGGG +
Preference number: 4 (lower is better)
Translates to: TLHGVLGGLKCVDHSILHPALTP*SALSTG
Trigger: CCCAGTGGACAGTGCTGAGCACGGGGTCAGGGCTGG...ATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGCTGCCCTCTGCCTGTaGCCTCCAGCCCTGACCCCG +
Preference number: 4 (lower is better)
Translates to: DLPTGARNCSDFKGQRQQAALCL*PPALTP
Trigger: CGGGGTCAGGGCTGGAGGGCACAGGCAGAGGGCAGC...TTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR GCA 90 bp GAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGGCTCTTCCCTTGGGGTaGCAGCCAGCCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: EEGDDQKSVEEGASEGDQALPLG*QPAWEL
Trigger: CAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGC...CTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GGAAGCCCCATGTCTGTCCTTAGGTGGGAATTCTGGGCCTCGCTGCACGGAGGAATGGCCTCAGGCTCTTaGTGTGGACCCTGGGGTACA +
Preference number: 4 (lower is better)
Translates to: GSPMSVLRWEFWASLHGGMASGS*CGPWGT
Trigger: TGTACCCCAGGGTCCACAGCAAGAGCCTGAGGCCAT...TCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGACATGGGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR GCA 90 bp AGTGCTCGGCAGTTCTGGCAATATGTCCCTGCGTCGACTCACTGCCACGTGATCACCGGGAAACCATCCTaGGGAGAGGGGTCGAGGACC +
Preference number: 4 (lower is better)
Translates to: SARQFWQYVPASTHCHVITGKPS*GEGSRT
Trigger: GGTCCTCGACCCCTCTCCGCAGGATGGTTTCCCGGT...GATCACGTGGCAGTGAGTCGACGCAGGGACATATTGCCAGAACTGCCGAGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR CCA 90 bp CTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCCTCTTGTCGATGTCCATGTaGGCCAAGTTGCTAAGGTAC +
Preference number: 4 (lower is better)
Translates to: LRETSSSLGVPASLGAALLSMSM*AKLLRY
Trigger: GTACCTTAGCAACTTGGCCCACATGGACATCGACAA...GAGGGCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACCCATCTCCTGCAGGTGGCCTTCCATGTCTATCTaGGGTACCACGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PGTMMVDQAFGAPISCRWPSMSI*GTTACS
Trigger: GCTGCAGGCCGTGGTACCCCAGATAGACATGGAAGG...CCACCTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGGCGGGACTTGGCTCCTaGCTTCACGATCCAGATGTT +
Preference number: 4 (lower is better)
Translates to: SDFKGQRQQGTSSWGPRRAGLGS*LHDPDV
Trigger: AACATCTGGATCGTGAAGCCAGGAGCCAAGTCCCGC...CCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GGTGGGAGGGAAATGAAGACCTTAGCCGTGGGTAGAGTCCTCAAGGCCTTGCCTCTCGTCCGCGGGACTTaGCTCCTGGCTTCACGATCC +
Preference number: 4 (lower is better)
Translates to: GGREMKTLAVGRVLKALPLVRGT*LLASRS
Trigger: GGATCGTGAAGCCAGGAGCCAAGTCCCGCGGACGAG...AGGCAAGGCCTTGAGGACTCTACCCACGGCTAAGGTCTTCATTTCCCTCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGCTCGTCCGCGGGACTTaGCTCCTGGCTTCACGATCC +
Preference number: 4 (lower is better)
Translates to: DQKSVEEGASEGDQLFPWLVRGT*LLASRS
Trigger: GGATCGTGAAGCCAGGAGCCAAGTCCCGCGGACGAG...CCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCAGCATCTCCTCCAGGTaGTCCATGCACATGATGCCT +
Preference number: 4 (lower is better)
Translates to: PTSKGRGNKALPAGGLGGSISSR*SMHMMP
Trigger: AGGCATCATGTGCATGGACCACCTGGAGGAGATGCT...GCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp AAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAAGCATCTCCTCCAGGTaGTCCATGCACATGATGCCT +
Preference number: 4 (lower is better)
Translates to: KGLLRETSSSLGVPASLGSISSR*SMHMMP
Trigger: AGGCATCATGTGCATGGACCACCTGGAGGAGATGCT...TCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCTGGGCCTGGAACCTCTaGCTAGACCACATGTTGTCT +
Preference number: 4 (lower is better)
Translates to: PTSKGRGNKALPAGGLGGWAWNL*LDHMLS
Trigger: AGACAACATGTGGTCTAGCCAGAGGTTCCAGGCCCA...GCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCTGGGCCTGGAACCTCTaGCTAGACCACATGTTGTCT +
Preference number: 4 (lower is better)
Translates to: LWRKGLLRETSSSLGVPAWAWNL*LDHMLS
Trigger: AGACAACATGTGGTCTAGCCAGAGGTTCCAGGCCCA...GGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CGTGCTCAGCACTGTCCACTGGGTGTGAGTCACAGGTCGAGGCCCACCTTTCTTTCCTGCAGGTGGGCCTaGAACCTCTGGCTAGACCAC +
Preference number: 4 (lower is better)
Translates to: RAQHCPLGVSHRSRPTFLSCRWA*NLWLDH
Trigger: GTGGTCTAGCCAGAGGTTCCAGGCCCACCTGCAGGA...AAGAAAGGTGGGCCTCGACCTGTGACTCACACCCAGTGGACAGTGCTGAGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CGGTGTCCTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCATGCCAGGCATCCTGCAGGTGGGCCTaGAACCTCTGGCTAGACCAC +
Preference number: 4 (lower is better)
Translates to: RCPGRSEVRGSQHPSCQASCRWA*NLWLDH
Trigger: GTGGTCTAGCCAGAGGTTCCAGGCCCACCTGCAGGA...TGCCTGGCATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGACACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GGCTTCCCTAGCTTCATATCCCCCAGGCCCCTGCGCCTCTGGAATGTACCAACACCCATCTCCTGCAGGTaGGCCTGGAACCTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: GFPSFISPRPLRLWNVPTPISCR*AWNLWL
Trigger: TAGCCAGAGGTTCCAGGCCCACCTGCAGGAGATGGG...TGTTGGTACATTCCAGAGGCGCAGGGGCCTGGGGGATATGAAGCTAGGGAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR CCA 90 bp TTCTCTCTGGCAGACTTGCTGGCCTCCAGTGTAGCCCGCACCTCCCAGGCTCTCCATAGAGCTCAAAGCTaGCCTTCCGACACTGCACGG +
Preference number: 4 (lower is better)
Translates to: FSLADLLASSVARTSQALHRAQS*PSDTAR
Trigger: CCGTGCAGTGTCGGAAGGCCAGCTTTGAGCTCTATG...GAGAGCCTGGGAGGTGCGGGCTACACTGGAGGCCAGCAAGTCTGCCAGAGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CCA 90 bp CAAAGCTGGCCTTCCGACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGATCAATCAGCCAGGGCTaGAAGTCCTCCCCGAACACG +
Preference number: 4 (lower is better)
Translates to: QSWPSDTARCPGRSEVRGSISQG*KSSPNT
Trigger: CGTGTTCGGGGAGGACTTCCAGCCCTGGCTGATTGA...TCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TCCCTAGCTTCATATCCCCCAGGCCCCTGCGCCTCTGGAATGTACCAACAAGGGCTGAGGACCTGGCCCTaGTGTCGGAGTACATGGGGA +
Preference number: 4 (lower is better)
Translates to: SLASYPPGPCASGMYQQGLRTWP*CRSTWG
Trigger: TCCCCATGTACTCCGACACCAGGGCCAGGTCCTCAG...CCCTTGTTGGTACATTCCAGAGGCGCAGGGGCCTGGGGGATATGAAGCTAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR CCA 90 bp TCAAAGGCTCCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACGCGCCTGAGGACCTGGCCCTaGTGTCGGAGTACATGGGGA +
Preference number: 4 (lower is better)
Translates to: SKAPVSQLRSSIRSMTTRLRTWP*CRSTWG
Trigger: TCCCCATGTACTCCGACACCAGGGCCAGGTCCTCAG...GCGCGTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCCTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TCTGTCCTTAGGTGGGAATTCTGGGCCTCGCTGCACGGAGGAGCTGCTGATGGCTGTCGTCTGAGGACCTaGCCCTGGTGTCGGAGTACA +
Preference number: 4 (lower is better)
Translates to: SVLRWEFWASLHGGAADGCRLRT*PWCRST
Trigger: TGTACTCCGACACCAGGGCCAGGTCCTCAGACGACA...GCCATCAGCAGCTCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp CCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACCCATCTCCTGCAGGTGGTGTCGTCTGAGGACCTaGCCCTGGTGTCGGAGTACA +
Preference number: 4 (lower is better)
Translates to: PGTMMVDQAFGAPISCRWCRLRT*PWCRST
Trigger: TGTACTCCGACACCAGGGCCAGGTCCTCAGACGACA...CCACCTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGTGTCGTCTGAGGACCTaGCCCTGGTGTCGGAGTACA +
Preference number: 4 (lower is better)
Translates to: CSDFKGQRQQGTSSWGPRCRLRT*PWCRST
Trigger: TGTACTCCGACACCAGGGCCAGGTCCTCAGACGACA...CCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GTTGCGATCCCCTTCCATGTCTATCTGGGGTACCACGGCCTGCAGCTGCTGCAGGAGGCCCACCTTTCTTaGCTTCAGGATGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: VAIPFHVYLGYHGLQLLQEAHLS*LQDAGC
Trigger: GCACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTC...CTGCAGCAGCTGCAGGCCGTGGTACCCCAGATAGACATGGAAGGGGATCGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR CCA 90 bp ATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGTGCCAGCCAGCCTaGGAGCTGCCCTCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: MIRSLWRKGLLRETSSSLGCQPA*ELPSAC
Trigger: ACAGGCAGAGGGCAGCTCCCAGGCTGGCTGGCACCC...AAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp ATGAGCTCAAAGGCTCCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCCAAGGCACTTCCAGCTaGGGGCCTCGGAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: MSSKAPVSQLRSSIRSMTQGTSS*GPRRHR
Trigger: CCTGTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTG...GGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCCTTTGAGCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CACAGGAGAGCAGGAGCCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAACAAGGCACTTCCAGCTaGGGGCCTCGGAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: HRRAGAFLGFRMLGATLKQGTSS*GPRRHR
Trigger: CCTGTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTG...TTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGCTCCTGCTCTCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000438141.5
CDS-3UTR CCA 90 bp GACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCAGGCAGGCCTCAGCCCTaGGTTTGTCACAGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: DTARCPGRSEVRGSQHPSGRPQP*VCHSLA
Trigger: GGCCAGACTGTGACAAACCCAGGGCTGAGGCCTGCC...TGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CCA 90 bp AAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAATGTCTGTCCTTAGGTaGGAATTCTGGGCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: KGLLRETSSSLGVPASLGMSVLR*EFWASL
Trigger: CAGCGAGGCCCAGAATTCCCACCTAAGGACAGACAT...TCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR CCA 90 bp GGCCAATTCCTTCCCCTGTCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTGGGGTGGCAGCAGGGTaGGGCCTGAGCGATGGACCA +
Preference number: 4 (lower is better)
Translates to: GQFLPLSHGINVPMPGRCGVAAG*GLSDGP
Trigger: TGGTCCATCGCTCAGGCCCCACCCTGCTGCCACCCC...ACACCTACCGGGCATAGGAACGTTAATGCCATGAGACAGGGGAAGGAATTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR CCA 90 bp GCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGGGGGTGGCAGCAGGGTaGGGCCTGAGCGATGGACCA +
Preference number: 4 (lower is better)
Translates to: AFGLDLPTGARNCSDFKGGVAAG*GLSDGP
Trigger: TGGTCCATCGCTCAGGCCCCACCCTGCTGCCACCCC...CCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000430390.5
CDS-3UTR CCA 90 bp CTCGCACGCACACAGAGCTTCATCCACAAACTCTGGGGACACCAACACTGGGTTGGGGAAACTGGTGCGTaGCTCGAGCGGCTGCGGCTT +
Preference number: 4 (lower is better)
Translates to: LARTQSFIHKLWGHQHWVGETGA*LERLRL
Trigger: AAGCCGCAGCCGCTCGAGCCACGCACCAGTTTCCCC...AACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAAGCTCTGTGTGCGTGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR CCA 90 bp GGCCAATTCCTTCCCCTGTCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTGCGCCGAGGGGAAACTaGTGCGTGGCTCGAGCGGCT +
Preference number: 4 (lower is better)
Translates to: GQFLPLSHGINVPMPGRCAPRGN*CVARAA
Trigger: AGCCGCTCGAGCCACGCACCAGTTTCCCCTCGGCGC...ACACCTACCGGGCATAGGAACGTTAATGCCATGAGACAGGGGAAGGAATTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR CCA 90 bp TCAGAGCGCAGTGGCGTGATCACAGCTCACCACAGTTTTGATCTTCCCAGGCTCCTGGGCGTGGGTGCCTaGGACCAGCGTCTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: SERSGVITAHHSFDLPRLLGVGA*DQRLEG
Trigger: GCCTTCAAGACGCTGGTCCCAGGCACCCACGCCCAG...GAGCCTGGGAAGATCAAAACTGTGGTGAGCTGTGATCACGCCACTGCGCTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR CCA 90 bp TCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTGAGGCGCCCTGGGCGTaGGTGCCTGGGACCAGCGTC +
Preference number: 4 (lower is better)
Translates to: SHGINVPMPGRCHSASLAEAPWA*VPGTSV
Trigger: GACGCTGGTCCCAGGCACCCACGCCCAGGGCGCCTC...AGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAATGCCATGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR CCA 90 bp AGTTTCTTCATCTGTAAAGTGAAGGCTCACGCTCCCCACCCCTGGATCGGAGATGTATCCGAGGCGCCCTaGGCGTGGGTGCCTGGGACC +
Preference number: 4 (lower is better)
Translates to: SFFICKVKAHAPHPWIGDVSEAP*AWVPGT
Trigger: GGTCCCAGGCACCCACGCCCAGGGCGCCTCGGATAC...ATCTCCGATCCAGGGGTGGGGAGCGTGAGCCTTCACTTTACAGATGAAGAAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR CCA 90 bp GATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGTCCCCAGAGCCTCGCTaGGTCAGCAGAGGGACTGCT +
Preference number: 4 (lower is better)
Translates to: DQKSVEEGASEGDQLFPWSPEPR*VSRGTA
Trigger: AGCAGTCCCTCTGCTGACCCAGCGAGGCTCTGGGGA...CCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GAACCTCTGGCTAGACCACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGCATCCCCAGAGCCTCGCTaGGTCAGCAGAGGGACTGCT +
Preference number: 4 (lower is better)
Translates to: EPLARPHVVWRKQWMPMASPEPR*VSRGTA
Trigger: AGCAGTCCCTCTGCTGACCCAGCGAGGCTCTGGGGA...TGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCAGAGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR CCA 90 bp GACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCACAGCAGGAGCCTTTCTTaGCTTCAGGATGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: DFKGQRQQGTSSWGPRRHSRSLS*LQDAGC
Trigger: GCACCCAGCATCCTGAAGCCAAGAAAGGCTCCTGCT...GTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000438141.5
CDS-3UTR CCA 90 bp GATGGTGAAGCCCTCTACCAGGAGCCGGATGCCCACATATTGAGGCACCTCCACGAAGTGGTGACGGGCTaGGTCTGCATCCCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: DGEALYQEPDAHILRHLHEVVTG*VCIPAV
Trigger: CACAGCTGGGATGCAGACCCAGCCCGTCACCACTTC...GTGGAGGTGCCTCAATATGTGGGCATCCGGCTCCTGGTAGAGGGCTTCACCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473661.5
3UTR CAA 72 bp TCCCAGGCCAGGGGATACCCTGCTCAGCCCCTAGGCTaGAGGCCTGTTCTGGTTCCAGAACCTGATCATGAC +
Preference number: 4 (lower is better)
Translates to: SQARGYPAQPLG*RPVLVPEPDHD
Trigger: GTCATGATCAGGTTCTGGAACCAGAACAGGCCTCAAGCCTAGGGGCTGAGCAGGGTATCCCCTGGCCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
3UTR CAA 72 bp AGGTGCACTGAGTTGCCGTCCTTCATCACCACGGGGTaGCCGTTCACCAGCTTCAGCATCTCCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RCTELPSFITTG*PFTSFSISSRW
Trigger: CCACCTGGAGGAGATGCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGAAGGACGGCAACTCAGTGCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427220.5
3UTR CAA 72 bp TGCAGGTGGGCCTGGAACCTCTGGCTAGACCACATGTaGTCTGGCGGAAGCAGTGGATGCCGATGGCATGAG +
Preference number: 4 (lower is better)
Translates to: CRWAWNLWLDHM*SGGSSGCRWHE
Trigger: CTCATGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCAGAGGTTCCAGGCCCACCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
3UTR CAA 72 bp ATGAAGACCTTAGCCGTGGGTAGAGTCCTCAAGGCCTaGCCTGTGGTCGACAGGGCCTTAGTGCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: MKTLAVGRVLKA*PVVDRALVPTS
Trigger: GCTGGTGGGCACTAAGGCCCTGTCGACCACAGGCAAGGCCTTGAGGACTCTACCCACGGCTAAGGTCTTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
3UTR CAA 72 bp AGGAGGGGCCGCTCAATATACTTCTGCACCACCCACTaGCCGTCCTTCATCACCACGGGGTTGCCGTTCACC +
Preference number: 4 (lower is better)
Translates to: RRGRSIYFCTTH*PSFITTGLPFT
Trigger: GGTGAACGGCAACCCCGTGGTGATGAAGGACGGCAAGTGGGTGGTGCAGAAGTATATTGAGCGGCCCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000431204.5
CDS-3UTR TCA 90 bp TTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGACTTCACCACCAGCTTaGGAACGTTGCGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LFRLQRAEATRHFQLGASTSPPA*ERCGQQ
Trigger: CTGCTGCCCGCAACGTTCTCAAGCTGGTGGTGAAGT...CGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
CDS-3UTR TCA 90 bp AGTGCTCGGCAGTTCTGGCAATATGTCCCTGCGTCGACTCACTGCCACGTGATCGAGTGTCGAGGTGCCTaGGTTCTGCCCCTTCGTGGA +
Preference number: 4 (lower is better)
Translates to: SARQFWQYVPASTHCHVIECRGA*VLPLRG
Trigger: TCCACGAAGGGGCAGAACTCAGGCACCTCGACACTC...GATCACGTGGCAGTGAGTCGACGCAGGGACATATTGCCAGAACTGCCGAGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR TCA 90 bp GGGGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGTCACAGCGCTGGACCTaGGTGTCGAGGTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: GEKREMIRSLWRKGLLRESQRWT*VSRCLS
Trigger: ACTCAGGCACCTCGACACTCAGGTCCAGCGCTGTGA...CTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GTCCATGCACATGATGCCTCGTCCGCGGGACTTGGCTCCTGGCTTCACGATCCATGGATGCCGATGGCATaGGTTCTCCAGGTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: VHAHDASSAGLGSWLHDPWMPMA*VLQVLL
Trigger: CAGAAGCACCTGGAGAACTCATGCCATCGGCATCCA...TGGATCGTGAAGCCAGGAGCCAAGTCCCGCGGACGAGGCATCATGTGCATGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000430390.5
CDS-3UTR TCA 90 bp TGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGTGGATGCCGATGGCATaGGTTCTCCAGGTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: CSDFKGQRQQGTSSWGPRWMPMA*VLQVLL
Trigger: CAGAAGCACCTGGAGAACTCATGCCATCGGCATCCA...CCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR TCA 90 bp TCAAAGGCTCCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACGCGCGTGTCCTGGGAGGTCTaGAGTGCGTGGATCACAGCA +
Preference number: 4 (lower is better)
Translates to: SKAPVSQLRSSIRSMTTRVSWEV*SAWITA
Trigger: TGCTGTGATCCACGCACTTCAGACCTCCCAGGACAC...GCGCGTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCCTTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR TCA 90 bp TTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGTGTCCTGGGAGGTCTaGAGTGCGTGGATCACAGCA +
Preference number: 4 (lower is better)
Translates to: LFRLQRAEATRHFQLGASVSWEV*SAWITA
Trigger: TGCTGTGATCCACGCACTTCAGACCTCCCAGGACAC...CGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCCCAGCATCCGGTCAATaGCCACGCGCAGGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: ALTFRQVLGIVPTSKGRGPASGQ*PRAGCQ
Trigger: CTGACACCCTGCGCGTGGTCATTGACCGGATGCTGG...GCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGTGCTGTGCTGTCGTCTaGGGACCTGGCCCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: EEGDDQKSVEEGASEGDQCCAVV*GPGPGV
Trigger: GACACCAGGGCCAGGTCCTCAGACGACAGCACAGCA...CTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp ACCACCAGCTTGAGAACGTTGCGGGCAGCAGTCAGCCAGAAGTCCTCTGCTCCCAGCACTTTGGGAGGCTaGGGTGGATGGATCATGAGG +
Preference number: 4 (lower is better)
Translates to: TTSLRTLRAAVSQKSSAPSTLGG*GGWIMR
Trigger: CCTCATGATCCATCCACCTCAGCCTCCCAAAGTGCT...GGGAGCAGAGGACTTCTGGCTGACTGCTGCCCGCAACGTTCTCAAGCTGGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
CDS-3UTR TCA 90 bp CCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACCCATCTCCTGCAGGTGGGGAAGGGTGGGTGGGTaGATCGGTAGATCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: PGTMMVDQAFGAPISCRWGRVGG*IGRSES
Trigger: ACTCTCTGATCTACCGATTCACCCACCCACCCTTCC...CCACCTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR TCA 90 bp GAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGATTCTGATATACAACTaGGGCCCTCAAACCCCTGCA +
Preference number: 4 (lower is better)
Translates to: EGASEGDQLFPWGASQPGILIYN*GPQTPA
Trigger: TGCAGGGGTTTGAGGGCCTCAGTTGTATATCAGAAT...CCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GGGGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACTGTCCACTGGGTGTaGGTCACAGGTCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GEKREMIRSLWRKGLLRETVHWV*VTGRGP
Trigger: TGGGCCTCGACCTGTGACTCACACCCAGTGGACAGT...CTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCGCAGGAGCCTCGGTGTaGAAGGAGGGGAGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: ALTFRQVLGIVPTSKGRGAGASV*KEGRRG
Trigger: CCCTCTTCTCCCCTCCTTTCACACCGAGGCTCCTGC...GCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR TCA 90 bp ACCACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGCATGAGTTCTCCAGGTGCAGGAGCCTCGGTGTaGAAGGAGGGGAGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: TTCCLAEAVDADGMSSPGAGASV*KEGRRG
Trigger: CCCTCTTCTCCCCTCCTTTCACACCGAGGCTCCTGC...ACCTGGAGAACTCATGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
CDS-3UTR TCA 90 bp AGGGGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGCAGGAGCCTCGGTGTaGAAGGAGGGGAGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: RGEEGDDQKSVEEGASEGAGASV*KEGRRG
Trigger: CCCTCTTCTCCCCTCCTTTCACACCGAGGCTCCTGC...TCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR TCA 90 bp AGTGCTCGGCAGTTCTGGCAATATGTCCCTGCGTCGACTCACTGCCACGTGATCCAGCAGGGTGGGGCCTaGGCGATGGACCATCTTCTT +
Preference number: 4 (lower is better)
Translates to: SARQFWQYVPASTHCHVIQQGGA*AMDHLL
Trigger: AAGAAGATGGTCCATCGCTCAGGCCCCACCCTGCTG...GATCACGTGGCAGTGAGTCGACGCAGGGACATATTGCCAGAACTGCCGAGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR TCA 90 bp TTCTCTCTGGCAGACTTGCTGGCCTCCAGTGTAGCCCGCACCTCCCAGGCTCTCGGCCCTGCTTATAGATaGGCTCAAAGGCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: FSLADLLASSVARTSQALGPAYR*AQRLLC
Trigger: ACACAGGAGCCTTTGAGCTCATCTATAAGCAGGGCC...GAGAGCCTGGGAGGTGCGGGCTACACTGGAGGCCAGCAAGTCTGCCAGAGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR GCA 90 bp CGGTGTCCTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCATGCCAGGCAGAGGTGCCTGAGTTCTaGCCCTTCGTGGACCACTTG +
Preference number: 4 (lower is better)
Translates to: RCPGRSEVRGSQHPSCQAEVPEF*PFVDHL
Trigger: CAAGTGGTCCACGAAGGGGCAGAACTCAGGCACCTC...TGCCTGGCATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGACACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCACGGCCTGCAGCTGCTaGAGGATGTCCTCACAGCGC +
Preference number: 4 (lower is better)
Translates to: ALTFRQVLGIVPTSKGRGTACSC*RMSSQR
Trigger: GCGCTGTGAGGACATCCTGCAGCAGCTGCAGGCCGT...GCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCTCACGATCCAGATGTTaGGATCCCCTTCCATGTCTA +
Preference number: 4 (lower is better)
Translates to: LLRETSSSLGVPASLGAASRSRC*DPLPCL
Trigger: TAGACATGGAAGGGGATCGCAACATCTGGATCGTGA...GGCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GGAAGCCCCATGTCTGTCCTTAGGTGGGAATTCTGGGCCTCGCTGCACGGAGGATCATCACCACGGGGTTaGCGTTCACCAGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: GSPMSVLRWEFWASLHGGSSPRG*RSPASA
Trigger: TGCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGA...TCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGACATGGGGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR GCA 90 bp TGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGTCATCACCACGGGGTTaGCGTTCACCAGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: CSDFKGQRQQGTSSWGPRSSPRG*RSPASA
Trigger: TGCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGA...CCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp ACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCACATCATCACCACGGGGTTaGCGTTCACCAGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: TSKGRGNKALPAGGLGGTSSPRG*RSPASA
Trigger: TGCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGA...TGTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCTCTGGATGGAGTTGTTaGACAGGTGCACTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: ASEGDQLFPWGASQPGSCSGWSC*TGALSC
Trigger: ACAACTCAGTGCACCTGTGCAACAACTCCATCCAGA...GCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCGGGGCACCCATCTCCTaGAGGTGGGCCTGGAACCTC +
Preference number: 4 (lower is better)
Translates to: PLALTFRQVLGIVPTSKGGAPIS*RWAWNL
Trigger: GAGGTTCCAGGCCCACCTGCAGGAGATGGGTGCCCC...GCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp AATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCTGGCCTTCCGACACTaGACGGTGTCCTGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: NCSDFKGQRQQGTSSWGPLAFRH*TVSWEV
Trigger: GACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAG...AGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTGGCCTTCCGACACTaGACGGTGTCCTGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: EEGDDQKSVEEGASEGDQLAFRH*TVSWEV
Trigger: GACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAG...CTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCGACTGCTGTGGAGGGTaGCATCGTGGGGCTGGCGTT +
Preference number: 4 (lower is better)
Translates to: ALTFRQVLGIVPTSKGRGDCCGG*HRGAGV
Trigger: AACGCCAGCCCCACGATGGCACCCTCCACAGCAGTC...GCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp AATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTGACTGCTGTGGAGGGTaGCATCGTGGGGCTGGCGTT +
Preference number: 4 (lower is better)
Translates to: NCSDFKGQRQQGTSSWGPDCCGG*HRGAGV
Trigger: AACGCCAGCCCCACGATGGCACCCTCCACAGCAGTC...AGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp TATTTGGTGTTGGATCCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCGACTGCTGTGGAGGGTaGCATCGTGGGGCTGGCGTT +
Preference number: 4 (lower is better)
Translates to: YLVLDPGQGQWGIEAGASDCCGG*HRGAGV
Trigger: AACGCCAGCCCCACGATGGCACCCTCCACAGCAGTC...GGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAACACCAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR GCA 90 bp TATTTGGTGTTGGATCCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCGAGCCGGGCAGTGACTaGTGTGGAGGGTGCCATCGT +
Preference number: 4 (lower is better)
Translates to: YLVLDPGQGQWGIEAGASEPGSD*CGGCHR
Trigger: ACGATGGCACCCTCCACAGCAGTCACTGCCCGGCTC...GGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAACACCAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CAGGAGAGCAGGAGCCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAATCGAGCCGGGCAGTGACTaGTGTGGAGGGTGCCATCGT +
Preference number: 4 (lower is better)
Translates to: QESRSLSWLQDAGCHLEIEPGSD*CGGCHR
Trigger: ACGATGGCACCCTCCACAGCAGTCACTGCCCGGCTC...GATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGCTCCTGCTCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000438141.5
CDS-3UTR GCA 90 bp GGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCGAGCCGGGCAGTGACTaGTGTGGAGGGTGCCATCGT +
Preference number: 4 (lower is better)
Translates to: GDDQKSVEEGASEGDQLFEPGSD*CGGCHR
Trigger: ACGATGGCACCCTCCACAGCAGTCACTGCCCGGCTC...GAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp AGCCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAATCAAGGTTCGGTGGCGCAGGGTGTCAGCTTaGACGCCAGCACAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: SLSWLQDAGCHLEIKVRWRRVSA*TPAQSR
Trigger: CCGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCG...CCACCGAACCTTGATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000438141.5
CDS-3UTR GCA 90 bp TTTGGTGTTGGATCCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCCTCCCACCAGCTTGCTGTaGTGTCGTCTGAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: FGVGSRTRAVGNRSRGFPPTSLL*CRLRTW
Trigger: CCAGGTCCTCAGACGACAGCACAGCAAGCTGGTGGG...AGGGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAACACCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCCCCACCAGCTTGCTGTaGTGTCGTCTGAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: EGDDQKSVEEGASEGDQLPTSLL*CRLRTW
Trigger: CCAGGTCCTCAGACGACAGCACAGCAAGCTGGTGGG...GAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp ATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGCCCACCAGCTTGCTGTaGTGTCGTCTGAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: IRSLWRKGLLRETSSSLGPTSLL*CRLRTW
Trigger: CCAGGTCCTCAGACGACAGCACAGCAAGCTGGTGGG...CCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCGGCCAGGGGATACCCTaGTCAGCCCCTAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: GDDQKSVEEGASEGDQLFGQGIP*SAPRLE
Trigger: CTCAAGCCTAGGGGCTGAGCAGGGTATCCCCTGGCC...GAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGCAGCCAGAAGTCCTCTaGTCCCAGGCCAGGGGATAC +
Preference number: 4 (lower is better)
Translates to: DQKSVEEGASEGDQLFPWQPEVL*SQARGY
Trigger: GTATCCCCTGGCCTGGGAGCAGAGGACTTCTGGCTG...CCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
CDS-3UTR GCA 90 bp TTCACCACCAGCTTGAGAACGTTGCGGGCAGCAGTCAGCCAGAAGTCCTCTGCTCAGCCAGAAGTCCTCTaGTCCCAGGCCAGGGGATAC +
Preference number: 4 (lower is better)
Translates to: FTTSLRTLRAAVSQKSSAQPEVL*SQARGY
Trigger: GTATCCCCTGGCCTGGGAGCAGAGGACTTCTGGCTG...AGCAGAGGACTTCTGGCTGACTGCTGCCCGCAACGTTCTCAAGCTGGTGGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
CDS-3UTR GCA 90 bp GCATCCTTCATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACCCATCCAGCCAGAAGTCCTCTaGTCCCAGGCCAGGGGATAC +
Preference number: 4 (lower is better)
Translates to: ASFMPGTMMVDQAFGAPIQPEVL*SQARGY
Trigger: GTATCCCCTGGCCTGGGAGCAGAGGACTTCTGGCTG...GATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCATGAAGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CTGGGTGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCGGGTGCTCGGCTACATaGCAGGCCCATGGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LGATLKSRFGGREMKTLAGCSAT*QAHGRA
Trigger: AGCCCTCCCATGGGCCTGGCATGTAGCCGAGCACCC...GGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CAGGTCGAGGCCCACCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAATCGAGTCCTCAAGGCCTTaGCTGTGGTCGACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: QVEAHLSWLQDAGCHLEIESSRP*LWSTGP
Trigger: AGGCCCTGTCGACCACAGGCAAGGCCTTGAGGACTC...GATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTCGACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
CDS-3UTR GCA 90 bp ATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGAGTCCTCAAGGCCTTaGCTGTGGTCGACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: IRSLWRKGLLRETSSSLGESSRP*LWSTGP
Trigger: AGGCCCTGTCGACCACAGGCAAGGCCTTGAGGACTC...CCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp ATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACCCATCTCCTGCAGGTATCCCCCAGGCCCCTaGGCCTCTGGAATGTACCAA +
Preference number: 4 (lower is better)
Translates to: MPGTMMVDQAFGAPISCRYPPGP*ASGMYQ
Trigger: TTGGTACATTCCAGAGGCGCAGGGGCCTGGGGGATA...CCTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GTTGGATCCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCCTAGCTTCTATCCCCCAGGCCCCTaGGCCTCTGGAATGTACCAA +
Preference number: 4 (lower is better)
Translates to: VGSRTRAVGNRSRGFPSFYPPGP*ASGMYQ
Trigger: TTGGTACATTCCAGAGGCGCAGGGGCCTGGGGGATA...GAAGCTAGGGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR GCA 90 bp ACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCACAGCTCAAGCGATCTCCTaGCTTGGCCTCTCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: TSKGRGNKALPAGGLGGTAQAIS*LGLSKC
Trigger: GCACTTTGAGAGGCCAAGGCAGGAGATCGCTTGAGC...TGTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR GCA 90 bp TTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGATGCCCGCCTGGCATCTaGCGCCTGCGTGACCCTCCT +
Preference number: 4 (lower is better)
Translates to: LALTFRQVLGIVPTSKGRCPPGI*RLRDPP
Trigger: AGGAGGGTCACGCAGGCGGCAGATGCCAGGCGGGCA...TCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR GCA 90 bp GGCTTCCCTAGCTTCATATCCCCCAGGCCCCTGCGCCTCTGGAATGTACCAACACTGCCTTCATCCAGATaGCCACCCTCAGCCGCTCTT +
Preference number: 4 (lower is better)
Translates to: GFPSFISPRPLRLWNVPTLPSSR*PPSAAL
Trigger: AAGAGCGGCTGAGGGTGGGCATCTGGATGAAGGCAG...TGTTGGTACATTCCAGAGGCGCAGGGGCCTGGGGGATATGAAGCTAGGGAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR GCA 90 bp CTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCATGCCAGGCACGATGATACCGGGAAACCATCCTaGGGAGAGGGGTCGAGGACC +
Preference number: 4 (lower is better)
Translates to: LGGLKCVDHSILHARHDDTGKPS*GEGSRT
Trigger: GGTCCTCGACCCCTCTCCGCAGGATGGTTTCCCGGT...ATCATCGTGCCTGGCATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431204.5
CDS-3UTR GCA 90 bp TTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACGGTCAGCAGAGGGACTaGTGGGCGGACCCCCATCCG +
Preference number: 4 (lower is better)
Translates to: LTFRQVLGIVPTSKGRGNGQQRD*WADPHP
Trigger: CGGATGGGGGTCCGCCCAGCAGTCCCTCTGCTGACC...GTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430793.1
ENST00000473661.5
CDS-3UTR GCA 90 bp AGTGCGTGGATCACAGCATCCTTCATGCCAGGCACGATGATGGTGGACCAAGCAGTGACGGGCTGGGTCTaGATCCCAGCTGTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: SAWITASFMPGTMMVDQAVTGWV*IPAVPL
Trigger: AAGGGGCACAGCTGGGATGCAGACCCAGCCCGTCAC...TGCTTGGTCCACCATCATCGTGCCTGGCATGAAGGATGCTGTGATCCACGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR CCA 90 bp ACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCACAGCGGGACTTGGCTCCTaGCTTCACGATCCAGATGTT +
Preference number: 4 (lower is better)
Translates to: TSKGRGNKALPAGGLGGTAGLGS*LHDPDV
Trigger: AACATCTGGATCGTGAAGCCAGGAGCCAAGTCCCGC...TGTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CCTCGCACGCACACAGAGCTTCATCCACAAACTCTGGGGACACCAACACTGGGTTCCTGCAGGTGGGCCTaGAACCTCTGGCTAGACCAC +
Preference number: 4 (lower is better)
Translates to: PRTHTELHPQTLGTPTLGSCRWA*NLWLDH
Trigger: GTGGTCTAGCCAGAGGTTCCAGGCCCACCTGCAGGA...ACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAAGCTCTGTGTGCGTGCGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR CCA 90 bp GAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTCCTGCAGGTGGGCCTaGAACCTCTGGCTAGACCAC +
Preference number: 4 (lower is better)
Translates to: EGDDQKSVEEGASEGDQLSCRWA*NLWLDH
Trigger: GTGGTCTAGCCAGAGGTTCCAGGCCCACCTGCAGGA...GAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GGGAGGGAAATGAAGACCTTAGCCGTGGGTAGAGTCCTCAAGGCCTTGCCTGTGTCCTGCAGGTGGGCCTaGAACCTCTGGCTAGACCAC +
Preference number: 4 (lower is better)
Translates to: GREMKTLAVGRVLKALPVSCRWA*NLWLDH
Trigger: GTGGTCTAGCCAGAGGTTCCAGGCCCACCTGCAGGA...CACAGGCAAGGCCTTGAGGACTCTACCCACGGCTAAGGTCTTCATTTCCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGGTGGACCAAGCATTTaGGGCACCCATCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LFRLQRAEATRHFQLGASGGPSI*GTHLLQ
Trigger: CTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACC...CGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CTCAAAGCTGGCCTTCCGACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGCATAGAGCTCAAAGCTaGCCTTCCGACACTGCACGG +
Preference number: 4 (lower is better)
Translates to: LKAGLPTLHGVLGGLKCVHRAQS*PSDTAR
Trigger: CCGTGCAGTGTCGGAAGGCCAGCTTTGAGCTCTATG...CACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAGCTTTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GGGGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGAAGGCAGCTGGGCCTTaGTGTGGAGGCTGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GEKREMIRSLWRKGLLREKAAGP*CGGWGS
Trigger: ACTTCCCCAGCCTCCACACCAAGGCCCAGCTGCCTT...CTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp AGGGGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGATGGGGAGAAGGCAGCTaGGCCTTGGTGTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RGEEGDDQKSVEEGASEGWGEGS*ALVWRL
Trigger: CAGCCTCCACACCAAGGCCCAGCTGCCTTCTCCCCA...TCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TTCATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACCCATCTCCTGCCTGAGGACCTGGCCCTaGTGTCGGAGTACATGGGGA +
Preference number: 4 (lower is better)
Translates to: FMPGTMMVDQAFGAPISCLRTWP*CRSTWG
Trigger: TCCCCATGTACTCCGACACCAGGGCCAGGTCCTCAG...GCAGGAGATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GCATCCTTCATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACCCATCGCTCCTGTTTCAGGCTaGTCACGGTGGCTGACGCCT +
Preference number: 4 (lower is better)
Translates to: ASFMPGTMMVDQAFGAPIAPVSG*SRWLTP
Trigger: AGGCGTCAGCCACCGTGACCAGCCTGAAACAGGAGC...GATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCATGAAGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GCCTTAGTGCCCACCAGCTTGCTGTGCTGTCGTCTGAGGACCTGGCCCTGGTGTGATTTTCCTCCTTCCTaGAGAGCTGCCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: ALVPTSLLCCRLRTWPWCDFPPS*RAASAS
Trigger: GGAAGCAGAGGCAGCTCTCCAGGAAGGAGGAAAATC...ACACCAGGGCCAGGTCCTCAGACGACAGCACAGCAAGCTGGTGGGCACTAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR CCA 90 bp GACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCACTTGTGCCCCTTATCCTaGCACACAACCAAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: DFKGQRQQGTSSWGPRRHLCPLS*HTTKPS
Trigger: GGAAGGCTTGGTTGTGTGCCAGGATAAGGGGCACAA...GTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GGCCAATTCCTTCCCCTGTCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTGGCTCAGCCTCTTCATaGGGCAGGCCTCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GQFLPLSHGINVPMPGRCGSASS*GRPQPW
Trigger: CCAGGGCTGAGGCCTGCCCCATGAAGAGGCTGAGCC...ACACCTACCGGGCATAGGAACGTTAATGCCATGAGACAGGGGAAGGAATTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp ATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCAGGCCCCTGCGCCTCTaGAATGTACCAACAAGGGGC +
Preference number: 4 (lower is better)
Translates to: IVPTSKGRGNKALPAGGLRPLRL*NVPTRG
Trigger: GCCCCTTGTTGGTACATTCCAGAGGCGCAGGGGCCT...GAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp AGTGCTCGGCAGTTCTGGCAATATGTCCCTGCGTCGACTCACTGCCACGTGATCCCAGGACAAGGGCAGTaGGGAATCGAAGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: SARQFWQYVPASTHCHVIPGQGQ*GIEAGA
Trigger: AGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGG...GATCACGTGGCAGTGAGTCGACGCAGGGACATATTGCCAGAACTGCCGAGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp TTCATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACCCATCTCCTGCCCAGGACAAGGGCAGTaGGGAATCGAAGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: FMPGTMMVDQAFGAPISCPGQGQ*GIEAGA
Trigger: AGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGG...GCAGGAGATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCGTGGGTCTTGCTGTGGACCCTaGGGTACACGGCCTCGCCCC +
Preference number: 4 (lower is better)
Translates to: CHLEIKVRWEGNEDLSRGSCCGP*GTRPRP
Trigger: GGGGCGAGGCCGTGTACCCCAGGGTCCACAGCAAGA...CCCACGGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR CCA 90 bp GGAAGCCCCATGTCTGTCCTTAGGTGGGAATTCTGGGCCTCGCTGCACGGAGGAAGTGCTCGGCAGTTCTaGCAATATGTCCCTGCGTCG +
Preference number: 4 (lower is better)
Translates to: GSPMSVLRWEFWASLHGGSARQF*QYVPAS
Trigger: CGACGCAGGGACATATTGCCAGAACTGCCGAGCACT...TCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGACATGGGGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp TCTGTCCTTAGGTGGGAATTCTGGGCCTCGCTGCACGGAGGAGCTGCTGATGGCAGTGCTCGGCAGTTCTaGCAATATGTCCCTGCGTCG +
Preference number: 4 (lower is better)
Translates to: SVLRWEFWASLHGGAADGSARQF*QYVPAS
Trigger: CGACGCAGGGACATATTGCCAGAACTGCCGAGCACT...GCCATCAGCAGCTCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp TCAGAGCGCAGTGGCGTGATCACAGCTCACCACAGTTTTGATCTTCCCAGGCTCCTTGTTCTCTGGGGTTaGGGGGCTCCCAGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: SERSGVITAHHSFDLPRLLVLWG*GAPSAR
Trigger: CCGAGCACTGGGAGCCCCCCAACCCCAGAGAACAAG...GAGCCTGGGAAGATCAAAACTGTGGTGAGCTGTGATCACGCCACTGCGCTCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp GCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCATGCCAGGTGGGGCCTGAGCGATaGACCATCTTCTTCTCCACC +
Preference number: 4 (lower is better)
Translates to: ARCPGRSEVRGSQHPSCQVGPER*TIFFST
Trigger: GGTGGAGAAGAAGATGGTCCATCGCTCAGGCCCCAC...CTGGCATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGACACCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
CDS-3UTR CCA 90 bp GGTGGGTGTGGCTTATTGGATGTTTCATTTTTAGGTGACCTTGGCCCCTTGCTGCGCGCTCAGGAGCAGTaGCGCGTCGGGGCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: GGCGLLDVSFLGDLGPLLRAQEQ*RVGALH
Trigger: ATGCAGGGCCCCGACGCGCCACTGCTCCTGAGCGCG...CAGCAAGGGGCCAAGGTCACCTAAAAATGAAACATCCAATAAGCCACACCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR TCA 90 bp GAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTTGCCTGAATAGGGTATaGCTTCCACTCAGACTTCAC +
Preference number: 4 (lower is better)
Translates to: EEGASEGDQLFPWGASQPCLNRV*LPLRLH
Trigger: GTGAAGTCTGAGTGGAAGTCATACCCTATTCAGGCA...AGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp CACAGGAGAGCAGGAGCCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAAGAGTGTCGAGGTGCCTaGGTTCTGCCCCTTCGTGGA +
Preference number: 4 (lower is better)
Translates to: HRRAGAFLGFRMLGATLKECRGA*VLPLRG
Trigger: TCCACGAAGGGGCAGAACTCAGGCACCTCGACACTC...TTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGCTCCTGCTCTCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438141.5
CDS-3UTR TCA 90 bp AAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCACAGCGCTGGACCTaGGTGTCGAGGTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: KREMIRSLWRKGLLRETSSQRWT*VSRCLS
Trigger: ACTCAGGCACCTCGACACTCAGGTCCAGCGCTGTGA...GCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp TGGCTAGACCACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGCATGAGTTCTCACAGCGCTGGACCTaGGTGTCGAGGTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: WLDHMLSGGSSGCRWHEFSQRWT*VSRCLS
Trigger: ACTCAGGCACCTCGACACTCAGGTCCAGCGCTGTGA...GAACTCATGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GGAAGCCCCATGTCTGTCCTTAGGTGGGAATTCTGGGCCTCGCTGCACGGAGGAGTTGCACAGGTGCACTaGGTTGTCCAGGTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: GSPMSVLRWEFWASLHGGVAQVH*VVQVLQ
Trigger: CTGAAGAACCTGGACAACTCAGTGCACCTGTGCAAC...TCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGACATGGGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR TCA 90 bp GTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACGCGCAGGGTGTCAGCTGTTGCACAGGTGCACTaGGTTGTCCAGGTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: VSQLRSSIRSMTTRRVSAVAQVH*VVQVLQ
Trigger: CTGAAGAACCTGGACAACTCAGTGCACCTGTGCAAC...AGCTGACACCCTGCGCGTGGTCATTGACCGGATGCTGGACCGCAACTGTGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GGAAGCCCCATGTCTGTCCTTAGGTGGGAATTCTGGGCCTCGCTGCACGGAGGATCATGCCAGGCACGATaGTGGTGGACCAAGCATTTG +
Preference number: 4 (lower is better)
Translates to: GSPMSVLRWEFWASLHGGSCQAR*WWTKHL
Trigger: CAAATGCTTGGTCCACCATCATCGTGCCTGGCATGA...TCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGACATGGGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR TCA 90 bp ACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGCACAGAGCCGGGCAGTaGCTGCTGTGGAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: TFRQVLGIVPTSKGRGNKHRAGQ*LLWRVP
Trigger: TGGCACCCTCCACAGCAGTCACTGCCCGGCTCTGTG...CTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GGGCTGAGGTTTAGGCAAGGCCAATTCCTTCCCCTGTCTCATGGCATTAACGTTCACAGAGCCGGGCAGTaGCTGCTGTGGAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: GLRFRQGQFLPLSHGINVHRAGQ*LLWRVP
Trigger: TGGCACCCTCCACAGCAGTCACTGCCCGGCTCTGTG...AACGTTAATGCCATGAGACAGGGGAAGGAATTGGCCTTGCCTAAACCTCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR TCA 90 bp TTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACCACAGAGCCGGGCAGTaGCTGCTGTGGAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: LTFRQVLGIVPTSKGRGNHRAGQ*LLWRVP
Trigger: TGGCACCCTCCACAGCAGTCACTGCCCGGCTCTGTG...GTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GCAGGAGCCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAATCAAGGTTCTGCTGTGCTGTCGTCTaGGGACCTGGCCCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: AGAFLGFRMLGATLKSRFCCAVV*GPGPGV
Trigger: GACACCAGGGCCAGGTCCTCAGACGACAGCACAGCA...GAACCTTGATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGCTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000438141.5
CDS-3UTR TCA 90 bp GTTGGATCCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCCTAGCTTCAGCACTTTGGGAGGCTaGGGTGGATGGATCATGAGG +
Preference number: 4 (lower is better)
Translates to: VGSRTRAVGNRSRGFPSFSTLGG*GGWIMR
Trigger: CCTCATGATCCATCCACCTCAGCCTCCCAAAGTGCT...GAAGCTAGGGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
CDS-3UTR TCA 90 bp TCAAAGGCTCCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACGCGCAGCACTTTGGGAGGCTaGGGTGGATGGATCATGAGG +
Preference number: 4 (lower is better)
Translates to: SKAPVSQLRSSIRSMTTRSTLGG*GGWIMR
Trigger: CCTCATGATCCATCCACCTCAGCCTCCCAAAGTGCT...GCGCGTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCCTTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
CDS-3UTR TCA 90 bp TGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGACCACAGTACTTACCTaGGGCCTCTTCCTCTACTGC +
Preference number: 4 (lower is better)
Translates to: CSDFKGQRQQGTSSWGPRTTVLT*GLFLYC
Trigger: GCAGTAGAGGAAGAGGCCTCAGGTAAGTACTGTGGT...CCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GCCTTAGTGCCCACCAGCTTGCTGTGCTGTCGTCTGAGGACCTGGCCCTGGTGTGAGATTAACAATGGGTaGCAGGTGGGAGGATGGAAG +
Preference number: 4 (lower is better)
Translates to: ALVPTSLLCCRLRTWPWCEINNG*QVGGWK
Trigger: CTTCCATCCTCCCACCTGTCACCCATTGTTAATCTC...ACACCAGGGCCAGGTCCTCAGACGACAGCACAGCAAGCTGGTGGGCACTAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR TCA 90 bp AGTGCTCGGCAGTTCTGGCAATATGTCCCTGCGTCGACTCACTGCCACGTGATCGGCCCATGGGAGGGCTaGATGAGGAGTGGATCAACT +
Preference number: 4 (lower is better)
Translates to: SARQFWQYVPASTHCHVIGPWEG*MRSGST
Trigger: AGTTGATCCACTCCTCATTCAGCCCTCCCATGGGCC...GATCACGTGGCAGTGAGTCGACGCAGGGACATATTGCCAGAACTGCCGAGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR TCA 90 bp GATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTACTGTCCACTGGGTGTaGGTCACAGGTCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: DDQKSVEEGASEGDQLFPTVHWV*VTGRGP
Trigger: TGGGCCTCGACCTGTGACTCACACCCAGTGGACAGT...AGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp AGTGCTCGGCAGTTCTGGCAATATGTCCCTGCGTCGACTCACTGCCACGTGATCCGACTCACTGCCACGTaGTCTTGGGTAAGCCATGCC +
Preference number: 4 (lower is better)
Translates to: SARQFWQYVPASTHCHVIRLTAT*SWVSHA
Trigger: GGCATGGCTTACCCAAGATCACGTGGCAGTGAGTCG...GATCACGTGGCAGTGAGTCGACGCAGGGACATATTGCCAGAACTGCCGAGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR TCA 90 bp GCATCCTTCATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACCCATCCTGAGCCGGTTCATGTaGGACGCCTTGGAGGATCCT +
Preference number: 4 (lower is better)
Translates to: ASFMPGTMMVDQAFGAPILSRFM*DALEDP
Trigger: AGGATCCTCCAAGGCGTCTCACATGAACCGGCTCAG...GATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCATGAAGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000431204.5
CDS-3UTR TCA 90 bp CCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACGCGCAGGGTGTCAACTGTCACCCATCGCTaGGCTATCCAGATCCTTCTG +
Preference number: 4 (lower is better)
Translates to: PVSQLRSSIRSMTTRRVSTVTHR*AIQILL
Trigger: CAGAAGGATCTGGATAGCTCAGCGATGGGTGACAGT...TGACACCCTGCGCGTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000430390.5
CDS-3UTR TCA 90 bp CTGTTCTGGTTCCAGAACCTGATCATGACTTGCCCCATTTTGGATCCAGAACCTCATCTGCCGCCTGCGTaGCCCTCCTCGGACTGGGCG +
Preference number: 4 (lower is better)
Translates to: LFWFQNLIMTCPILDPEPHLPPA*PSSDWA
Trigger: CGCCCAGTCCGAGGAGGGTCACGCAGGCGGCAGATG...AGGTTCTGGATCCAAAATGGGGCAAGTCATGATCAGGTTCTGGAACCAGAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR TCA 90 bp AGTTTCTTCATCTGTAAAGTGAAGGCTCACGCTCCCCACCCCTGGATCGGAGATAGGCTGGGGAAGTGGTaGCGGGCTTCCCCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: SFFICKVKAHAPHPWIGDRLGKW*RASPEP
Trigger: AGGCTCTGGGGAAGCCCGTCACCACTTCCCCAGCCT...ATCTCCGATCCAGGGGTGGGGAGCGTGAGCCTTCACTTTACAGATGAAGAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR TCA 90 bp AGGGGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGACAGCTGTGCCCCTTCTaGGCTGTGCAACCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: RGEEGDDQKSVEEGASEGQLCPF*AVQPWA
Trigger: TGCCCAAGGTTGCACAGCTCAGAAGGGGCACAGCTG...TCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CTGGGTGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCACGGCCTGCAGCTGCTaGAGGATGTCCTCACAGCGC +
Preference number: 4 (lower is better)
Translates to: LGATLKSRFGGREMKTLATACSC*RMSSQR
Trigger: GCGCTGTGAGGACATCCTGCAGCAGCTGCAGGCCGT...GGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp ATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACCCATCTCCTGCAGGTCATCACCACGGGGTTaGCGTTCACCAGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: MPGTMMVDQAFGAPISCRSSPRG*RSPASA
Trigger: TGCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGA...CCTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGTCTGGATGGAGTTGTTaGACAGGTGCACTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: VEEGASEGDQLFPWGASQSGWSC*TGALSC
Trigger: ACAACTCAGTGCACCTGTGCAACAACTCCATCCAGA...CTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp TTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACGGGGCACCCATCTCCTaGAGGTGGGCCTGGAACCTC +
Preference number: 4 (lower is better)
Translates to: LTFRQVLGIVPTSKGRGNGAPIS*RWAWNL
Trigger: GAGGTTCCAGGCCCACCTGCAGGAGATGGGTGCCCC...GTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CAGTTGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTGGAGGGGCACCCATCTCCTaGAGGTGGGCCTGGAACCTC +
Preference number: 4 (lower is better)
Translates to: QLPFSTTSTVLESVLSLGGAPIS*RWAWNL
Trigger: GAGGTTCCAGGCCCACCTGCAGGAGATGGGTGCCCC...TCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR GCA 90 bp TGCGATCCCCTTCCATGTCTATCTGGGGTACCACGGCCTGCAGCTGCTGCAGGACTGGGAGGTCTGAAGTaGGTGGATCACAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: CDPLPCLSGVPRPAAAAGLGGLK*VDHSIL
Trigger: AAGGATGCTGTGATCCACGCACTTCAGACCTCCCAG...TCCTGCAGCAGCTGCAGGCCGTGGTACCCCAGATAGACATGGAAGGGGATCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000430390.5
CDS-3UTR GCA 90 bp GTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGACTGGGAGGTCTGAAGTaGGTGGATCACAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: VPTSKGRGNKALPAGGLGLGGLK*VDHSIL
Trigger: AAGGATGCTGTGATCCACGCACTTCAGACCTCCCAG...TCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp AGAGCAGGAGCCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAATCAAGGGACTGCTGTGGAGGGTaGCATCGTGGGGCTGGCGTT +
Preference number: 4 (lower is better)
Translates to: RAGAFLGFRMLGATLKSRDCCGG*HRGAGV
Trigger: AACGCCAGCCCCACGATGGCACCCTCCACAGCAGTC...CCTTGATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGCTCCTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000438141.5
CDS-3UTR GCA 90 bp GGCCAATTCCTTCCCCTGTCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTGAGCCGGGCAGTGACTaGTGTGGAGGGTGCCATCGT +
Preference number: 4 (lower is better)
Translates to: GQFLPLSHGINVPMPGRCEPGSD*CGGCHR
Trigger: ACGATGGCACCCTCCACAGCAGTCACTGCCCGGCTC...ACACCTACCGGGCATAGGAACGTTAATGCCATGAGACAGGGGAAGGAATTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR GCA 90 bp CGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCGCAGGGTGTCAGCTTaGACGCCAGCACAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: RQVLGIVPTSKGRGNKALRRVSA*TPAQSR
Trigger: CCGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCG...AAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCATGCCAGCTCCTGTGTCACAGTTaGGGTCCAGCATCCGGTCAA +
Preference number: 4 (lower is better)
Translates to: ARCPGRSEVRGSQHPSCQLLCHS*GPASGQ
Trigger: TTGACCGGATGCTGGACCGCAACTGTGACACAGGAG...CTGGCATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGACACCGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GGCTTCCCTAGCTTCATATCCCCCAGGCCCCTGCGCCTCTGGAATGTACCAACACTCCTGTGTCACAGTTaGGGTCCAGCATCCGGTCAA +
Preference number: 4 (lower is better)
Translates to: GFPSFISPRPLRLWNVPTLLCHS*GPASGQ
Trigger: TTGACCGGATGCTGGACCGCAACTGTGACACAGGAG...TGTTGGTACATTCCAGAGGCGCAGGGGCCTGGGGGATATGAAGCTAGGGAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR GCA 90 bp ACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCATCCCACCAGCTTGCTGTaGTGTCGTCTGAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: TLHGVLGGLKCVDHSILHPTSLL*CRLRTW
Trigger: CCAGGTCCTCAGACGACAGCACAGCAAGCTGGTGGG...ATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR GCA 90 bp AAGGTACTCCTCGCACGCACACAGAGCTTCATCCACAAACTCTGGGGACACCAAGGCCAGGGGATACCCTaGTCAGCCCCTAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: KVLLARTQSFIHKLWGHQGQGIP*SAPRLE
Trigger: CTCAAGCCTAGGGGCTGAGCAGGGTATCCCCTGGCC...TTGGTGTCCCCAGAGTTTGTGGATGAAGCTCTGTGTGCGTGCGAGGAGTACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000496246.5
CDS-3UTR GCA 90 bp GACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCACAAAGCCCAGTTTCACTaGTTCCTCCTCCTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: DFKGQRQQGTSSWGPRRHKAQFH*FLLLRD
Trigger: GTCTCTGAGGAGGAGGAAGCAGTGAAACTGGGCTTT...GTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCCTAGCTTCATATCCCTGTCACTCGAGGCTCTaGCCTAAATGTCCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: PGQGQWGIEAGASLASYPCHSRL*PKCPQG
Trigger: GCCTTGGGGACATTTAGGGCAGAGCCTCGAGTGACA...GGGATATGAAGCTAGGGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCGAGTCCTCAAGGCCTTaGCTGTGGTCGACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: EMIRSLWRKGLLRETSSSESSRP*LWSTGP
Trigger: AGGCCCTGTCGACCACAGGCAAGGCCTTGAGGACTC...GGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp AGGGGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGAGTCCTCAAGGCCTTaGCTGTGGTCGACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: RGEEGDDQKSVEEGASEGESSRP*LWSTGP
Trigger: AGGCCCTGTCGACCACAGGCAAGGCCTTGAGGACTC...TCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTCTTCAGGATGCTGGGTaGCACCTTGAAATCAAGGTT +
Preference number: 4 (lower is better)
Translates to: EEGASEGDQLFPWGASQPLQDAG*HLEIKV
Trigger: AACCTTGATTTCAAGGTGGCACCCAGCATCCTGAAG...AGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGCTCTTCCCTTGGGGTaGCAGCCAGCCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: DLPTGARNCSDFKGQRQQALPLG*QPAWEL
Trigger: CAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGC...TTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR GCA 90 bp AGGTGCACTGAGTTGTCCAGGTTCTTCAGGGAGAAGGGCTGCGTGGAAAAGCGGTATCCCCCAGGCCCCTaGGCCTCTGGAATGTACCAA +
Preference number: 4 (lower is better)
Translates to: RCTELSRFFREKGCVEKRYPPGP*ASGMYQ
Trigger: TTGGTACATTCCAGAGGCGCAGGGGCCTGGGGGATA...CCGCTTTTCCACGCAGCCCTTCTCCCTGAAGAACCTGGACAACTCAGTGCACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430390.5
CDS-3UTR GCA 90 bp GTTCAACCCACTACAACTAAGCAGTGCCACACTTTTCTTCAGGTGGGTGTGGCTGCTTCCGCAGCCAGTTaGACACCGCGCCGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: VQPTTTKQCHTFLQVGVAASAAS*TPRRPP
Trigger: AGGAGGGCGGCGCGGTGTGCAACTGGCTGCGGAAGC...AGCCACACCCACCTGAAGAAAAGTGTGGCACTGCTTAGTTGTAGTGGGTTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR GCA 90 bp TCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTCGTGGCTCGAGCGGCTaGGGCTTCCGCAGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: SHGINVPMPGRCHSASLARGSSG*GFRSQL
Trigger: CAACTGGCTGCGGAAGCCGCAGCCGCTCGAGCCACG...AGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAATGCCATGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR GCA 90 bp TTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTTGTTCTCTGGCCGAGGGGAAACTGGTaGGTGGCTCGAGCGGCTGCG +
Preference number: 4 (lower is better)
Translates to: LTFLCPVGVILLAWLVLWPRGNW*VARAAA
Trigger: CGCAGCCGCTCGAGCCACGCACCAGTTTCCCCTCGG...CCAGAGAACAAGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR GCA 90 bp TTGCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGCCGAGGGGAAACTGGTaGGTGGCTCGAGCGGCTGCG +
Preference number: 4 (lower is better)
Translates to: LPLALTFRQVLGIVPTSKPRGNW*VARAAA
Trigger: CGCAGCCGCTCGAGCCACGCACCAGTTTCCCCTCGG...CTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR GCA 90 bp TTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGCTACCAGGAGCCGGATaGCCACATATTGAGGCACCT +
Preference number: 4 (lower is better)
Translates to: LFRLQRAEATRHFQLGASLPGAG*PHIEAP
Trigger: AGGTGCCTCAATATGTGGGCATCCGGCTCCTGGTAG...CGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430793.1
ENST00000473661.5
CDS-3UTR CCA 90 bp GCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCTTATCATCTGATCCTTaGAGAGGAAGCGACAGTCGA +
Preference number: 4 (lower is better)
Translates to: ASEGDQLFPWGASQPGSCLSSDP*RGSDSR
Trigger: TCGACTGTCGCTTCCTCTCCAAGGATCAGATGATAA...GCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000443148.5
CDS-3UTR CCA 90 bp GATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGCCTTCCATGTCTATCTaGGGTACCACGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: DQKSVEEGASEGDQLFPWPSMSI*GTTACS
Trigger: GCTGCAGGCCGTGGTACCCCAGATAGACATGGAAGG...CCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GGCTTCCCTAGCTTCATATCCCCCAGGCCCCTGCGCCTCTGGAATGTACCAACAGCGGGACTTGGCTCCTaGCTTCACGATCCAGATGTT +
Preference number: 4 (lower is better)
Translates to: GFPSFISPRPLRLWNVPTAGLGS*LHDPDV
Trigger: AACATCTGGATCGTGAAGCCAGGAGCCAAGTCCCGC...TGTTGGTACATTCCAGAGGCGCAGGGGCCTGGGGGATATGAAGCTAGGGAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR CCA 90 bp TTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGAGACCACATGTTGTCTaGCGGAAGCAGTGGATGCCG +
Preference number: 4 (lower is better)
Translates to: LFRLQRAEATRHFQLGASRPHVV*RKQWMP
Trigger: CGGCATCCACTGCTTCCGCCAGACAACATGTGGTCT...CGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp AAGTGCGTGGATCACAGCATCCTTCATGCCAGGCACGATGATGGTGGACCAAGCTCCTGCAGGTGGGCCTaGAACCTCTGGCTAGACCAC +
Preference number: 4 (lower is better)
Translates to: KCVDHSILHARHDDGGPSSCRWA*NLWLDH
Trigger: GTGGTCTAGCCAGAGGTTCCAGGCCCACCTGCAGGA...GCTTGGTCCACCATCATCGTGCCTGGCATGAAGGATGCTGTGATCCACGCACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCCATCTCCTGCAGGTaGGCCTGGAACCTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: GDDQKSVEEGASEGDQLFPISCR*AWNLWL
Trigger: TAGCCAGAGGTTCCAGGCCCACCTGCAGGAGATGGG...GAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CAGGAGAGCAGGAGCCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAATCCCCATCTCCTGCAGGTaGGCCTGGAACCTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: QESRSLSWLQDAGCHLEIPISCR*AWNLWL
Trigger: TAGCCAGAGGTTCCAGGCCCACCTGCAGGAGATGGG...GATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGCTCCTGCTCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000438141.5
CDS-3UTR CCA 90 bp GGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCCCATCTCCTGCAGGTaGGCCTGGAACCTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: GEEGDDQKSVEEGASEGDPISCR*AWNLWL
Trigger: TAGCCAGAGGTTCCAGGCCCACCTGCAGGAGATGGG...GTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TGGAACCTCTGGCTAGACCACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGGGTGGACCAAGCATTTaGGGCACCCATCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: WNLWLDHMLSGGSSGCRWGGPSI*GTHLLQ
Trigger: CTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACC...CCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCAGAGGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GCATCCTTCATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACCCATCGGTGGACCAAGCATTTaGGGCACCCATCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: ASFMPGTMMVDQAFGAPIGGPSI*GTHLLQ
Trigger: CTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACC...GATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCATGAAGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR CCA 90 bp ATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACCCATCTCCTGCAGGCATAGAGCTCAAAGCTaGCCTTCCGACACTGCACGG +
Preference number: 4 (lower is better)
Translates to: MPGTMMVDQAFGAPISCRHRAQS*PSDTAR
Trigger: CCGTGCAGTGTCGGAAGGCCAGCTTTGAGCTCTATG...CCTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GGGGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGTCAATCAGCCAGGGCTaGAAGTCCTCCCCGAACACG +
Preference number: 4 (lower is better)
Translates to: GEKREMIRSLWRKGLLRESISQG*KSSPNT
Trigger: CGTGTTCGGGGAGGACTTCCAGCCCTGGCTGATTGA...CTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp ATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTCCTTGGTGTGGAGGCTaGGGAAGTGGTGACGGGCTG +
Preference number: 4 (lower is better)
Translates to: MIRSLWRKGLLRETSSSLPWCGG*GSGDGL
Trigger: CAGCCCGTCACCACTTCCCCAGCCTCCACACCAAGG...AAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCCCTTGGTGTGGAGGCTaGGGAAGTGGTGACGGGCTG +
Preference number: 4 (lower is better)
Translates to: PLALTFRQVLGIVPTSKGPWCGG*GSGDGL
Trigger: CAGCCCGTCACCACTTCCCCAGCCTCCACACCAAGG...GCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp AGAGCAGGAGCCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAATCAAGGCCTTGGTGTGGAGGCTaGGGAAGTGGTGACGGGCTG +
Preference number: 4 (lower is better)
Translates to: RAGAFLGFRMLGATLKSRPWCGG*GSGDGL
Trigger: CAGCCCGTCACCACTTCCCCAGCCTCCACACCAAGG...CCTTGATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGCTCCTGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000438141.5
CDS-3UTR CCA 90 bp CAGGTTCTTCAGGGAGAAGGGCTGCGTGGAAAAGCGGATATAGCTGTCGCGGTAAAGGCAGCTGGGCCTTaGTGTGGAGGCTGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: QVLQGEGLRGKADIAVAVKAAGP*CGGWGS
Trigger: ACTTCCCCAGCCTCCACACCAAGGCCCAGCTGCCTT...TACCGCGACAGCTATATCCGCTTTTCCACGCAGCCCTTCTCCCTGAAGAACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430390.5
CDS-3UTR CCA 90 bp CACAGGAGAGCAGGAGCCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAAAAGGCAGCTGGGCCTTaGTGTGGAGGCTGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: HRRAGAFLGFRMLGATLKKAAGP*CGGWGS
Trigger: ACTTCCCCAGCCTCCACACCAAGGCCCAGCTGCCTT...TTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGCTCCTGCTCTCCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000438141.5
CDS-3UTR CCA 90 bp CTGGGTGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCTGGGGAGAAGGCAGCTaGGCCTTGGTGTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LGATLKSRFGGREMKTLAWGEGS*ALVWRL
Trigger: CAGCCTCCACACCAAGGCCCAGCTGCCTTCTCCCCA...GGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CTTGGCTCCTGGCTTCACGATCCAGATGTTGCGATCCCCTTCCATGTCTATCTGTGGGGAGAAGGCAGCTaGGCCTTGGTGTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LGSWLHDPDVAIPFHVYLWGEGS*ALVWRL
Trigger: CAGCCTCCACACCAAGGCCCAGCTGCCTTCTCCCCA...CAGATAGACATGGAAGGGGATCGCAACATCTGGATCGTGAAGCCAGGAGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000430390.5
CDS-3UTR CCA 90 bp TCAGAGCGCAGTGGCGTGATCACAGCTCACCACAGTTTTGATCTTCCCAGGCTCCTGAGGACCTGGCCCTaGTGTCGGAGTACATGGGGA +
Preference number: 4 (lower is better)
Translates to: SERSGVITAHHSFDLPRLLRTWP*CRSTWG
Trigger: TCCCCATGTACTCCGACACCAGGGCCAGGTCCTCAG...GAGCCTGGGAAGATCAAAACTGTGGTGAGCTGTGATCACGCCACTGCGCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp GAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTGAGGACCTGGCCCTaGTGTCGGAGTACATGGGGA +
Preference number: 4 (lower is better)
Translates to: EMIRSLWRKGLLRETSSSLRTWP*CRSTWG
Trigger: TCCCCATGTACTCCGACACCAGGGCCAGGTCCTCAG...GGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTGAGGACCTGGCCCTaGTGTCGGAGTACATGGGGA +
Preference number: 4 (lower is better)
Translates to: EEGDDQKSVEEGASEGDQLRTWP*CRSTWG
Trigger: TCCCCATGTACTCCGACACCAGGGCCAGGTCCTCAG...CTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TTTGGTGTTGGATCCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCCTTGTCGTCTGAGGACCTaGCCCTGGTGTCGGAGTACA +
Preference number: 4 (lower is better)
Translates to: FGVGSRTRAVGNRSRGFPCRLRT*PWCRST
Trigger: TGTACTCCGACACCAGGGCCAGGTCCTCAGACGACA...AGGGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAACACCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTGTCGTCTGAGGACCTaGCCCTGGTGTCGGAGTACA +
Preference number: 4 (lower is better)
Translates to: EGDDQKSVEEGASEGDQLCRLRT*PWCRST
Trigger: TGTACTCCGACACCAGGGCCAGGTCCTCAGACGACA...GAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GGGGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGTGTCGTCTGAGGACCTaGCCCTGGTGTCGGAGTACA +
Preference number: 4 (lower is better)
Translates to: GEKREMIRSLWRKGLLRECRLRT*PWCRST
Trigger: TGTACTCCGACACCAGGGCCAGGTCCTCAGACGACA...CTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp ACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCACATTTGGGAGGCTGAGGTaGATGGATCATGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: TSKGRGNKALPAGGLGGTFGRLR*MDHEVR
Trigger: CCTGACCTCATGATCCATCCACCTCAGCCTCCCAAA...TGTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
CDS-3UTR CCA 90 bp AATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTGCTCCTGTTTCAGGCTaGTCACGGTGGCTGACGCCT +
Preference number: 4 (lower is better)
Translates to: NCSDFKGQRQQGTSSWGPAPVSG*SRWLTP
Trigger: AGGCGTCAGCCACCGTGACCAGCCTGAAACAGGAGC...AGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCGGAAGGGCGGATGGGTaGAGGATAAATGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: EGDDQKSVEEGASEGDQLGRADG*RINGWE
Trigger: CTCCCACCCATTTATCCTCCACCCATCCGCCCTTCC...GAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GGTGGGAGGGAAATGAAGACCTTAGCCGTGGGTAGAGTCCTCAAGGCCTTGCCTGGAAGGGCGGATGGGTaGAGGATAAATGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GGREMKTLAVGRVLKALPGRADG*RINGWE
Trigger: CTCCCACCCATTTATCCTCCACCCATCCGCCCTTCC...AGGCAAGGCCTTGAGGACTCTACCCACGGCTAAGGTCTTCATTTCCCTCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR CCA 90 bp CAGGTCGAGGCCCACCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAATCTCTAGCACTTGCCCTTaGCTCCCACTGTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: QVEAHLSWLQDAGCHLEISSTCP*LPLSQD
Trigger: GTCCTGGGACAGTGGGAGCCAAGGGCAAGTGCTAGA...GATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTCGACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGTCTAGCACTTGCCCTTaGCTCCCACTGTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: DQKSVEEGASEGDQLFPWSSTCP*LPLSQD
Trigger: GTCCTGGGACAGTGGGAGCCAAGGGCAAGTGCTAGA...CCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR CCA 90 bp TTGTCTGGCGGAAGCAGTGGATGCCGATGGCATGAGTTCTCCAGGTGCTTCTGGTCTAGCACTTGCCCTTaGCTCCCACTGTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LSGGSSGCRWHEFSRCFWSSTCP*LPLSQD
Trigger: GTCCTGGGACAGTGGGAGCCAAGGGCAAGTGCTAGA...CCAGAAGCACCTGGAGAACTCATGCCATCGGCATCCACTGCTTCCGCCAGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR CCA 90 bp CTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCGAAATCAAGGTTCGGTaGGAGGGAAATGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: LLRETSSSLGVPASLGAAEIKVR*EGNEDL
Trigger: AAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTC...GGCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp ACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGCAAGGCACTTCCAGCTaGGGGCCTCGGAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: TFRQVLGIVPTSKGRGNKQGTSS*GPRRHR
Trigger: CCTGTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTG...CTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GGGCTGAGGTTTAGGCAAGGCCAATTCCTTCCCCTGTCTCATGGCATTAACGTTCAAGGCACTTCCAGCTaGGGGCCTCGGAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: GLRFRQGQFLPLSHGINVQGTSS*GPRRHR
Trigger: CCTGTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTG...AACGTTAATGCCATGAGACAGGGGAAGGAATTGGCCTTGCCTAAACCTCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp TCAGAGCGCAGTGGCGTGATCACAGCTCACCACAGTTTTGATCTTCCCAGGCTCAGGCCCCTGCGCCTCTaGAATGTACCAACAAGGGGC +
Preference number: 4 (lower is better)
Translates to: SERSGVITAHHSFDLPRLRPLRL*NVPTRG
Trigger: GCCCCTTGTTGGTACATTCCAGAGGCGCAGGGGCCT...GAGCCTGGGAAGATCAAAACTGTGGTGAGCTGTGATCACGCCACTGCGCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp GGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACAGGCCCCTGCGCCTCTaGAATGTACCAACAAGGGGC +
Preference number: 4 (lower is better)
Translates to: GEEGDDQKSVEEGASEGDRPLRL*NVPTRG
Trigger: GCCCCTTGTTGGTACATTCCAGAGGCGCAGGGGCCT...GTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR CCA 90 bp TATTTGGTGTTGGATCCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCCCAGGACAAGGGCAGTaGGGAATCGAAGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: YLVLDPGQGQWGIEAGASPGQGQ*GIEAGA
Trigger: AGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGG...GGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAACACCAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCATGCCAGGCACGATGATCCAGGACAAGGGCAGTaGGGAATCGAAGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LGGLKCVDHSILHARHDDPGQGQ*GIEAGA
Trigger: AGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGG...ATCATCGTGCCTGGCATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCCCAGGACAAGGGCAGTaGGGAATCGAAGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: ALTFRQVLGIVPTSKGRGPGQGQ*GIEAGA
Trigger: AGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGG...GCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GGCTTCCCTAGCTTCATATCCCCCAGGCCCCTGCGCCTCTGGAATGTACCAACATCATGTGAGACGCCTTaGAGGATCCTCGCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: GFPSFISPRPLRLWNVPTSCETP*RILARG
Trigger: TCCTCTGGCGAGGATCCTCCAAGGCGTCTCACATGA...TGTTGGTACATTCCAGAGGCGCAGGGGCCTGGGGGATATGAAGCTAGGGAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR CCA 90 bp TTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTTGTTCTCTGGTGGCAGCCTCCTGGGTaGACGGAACTCGGAGCGGCG +
Preference number: 4 (lower is better)
Translates to: LTFLCPVGVILLAWLVLWWQPPG*TELGAA
Trigger: CGCCGCTCCGAGTTCCGTCCACCCAGGAGGCTGCCA...CCAGAGAACAAGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426895.9
3UTR CAA 72 bp GACTTCCACTCAGACTTCACCACCAGCTTGAGAACGTaGCGGGCAGCAGTCAGCCAGAAGTCCTCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: DFHSDFTTSLRT*RAAVSQKSSAP
Trigger: GGGAGCAGAGGACTTCTGGCTGACTGCTGCCCGCAACGTTCTCAAGCTGGTGGTGAAGTCTGAGTGGAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
CDS-3UTR TCA 90 bp ATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGAGTGTCGAGGTGCCTaGGTTCTGCCCCTTCGTGGA +
Preference number: 4 (lower is better)
Translates to: MIRSLWRKGLLRETSSSLECRGA*VLPLRG
Trigger: TCCACGAAGGGGCAGAACTCAGGCACCTCGACACTC...AAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GCAGGAGCCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAATCAAGGTTCTCACAGCGCTGGACCTaGGTGTCGAGGTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: AGAFLGFRMLGATLKSRFSQRWT*VSRCLS
Trigger: ACTCAGGCACCTCGACACTCAGGTCCAGCGCTGTGA...GAACCTTGATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGCTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000438141.5
CDS-3UTR TCA 90 bp TCCTTCATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACCCATCTCCTGGATGCCGATGGCATaGGTTCTCCAGGTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SFMPGTMMVDQAFGAPISWMPMA*VLQVLL
Trigger: CAGAAGCACCTGGAGAACTCATGCCATCGGCATCCA...GGAGATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCATGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTGGATGCCGATGGCATaGGTTCTCCAGGTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: EGDDQKSVEEGASEGDQLWMPMA*VLQVLL
Trigger: CAGAAGCACCTGGAGAACTCATGCCATCGGCATCCA...GAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACGTGTCCTGGGAGGTCTaGAGTGCGTGGATCACAGCA +
Preference number: 4 (lower is better)
Translates to: GEEGDDQKSVEEGASEGDVSWEV*SAWITA
Trigger: TGCTGTGATCCACGCACTTCAGACCTCCCAGGACAC...GTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp ACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCCCAGCATCCGGTCAATaGCCACGCGCAGGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: TGARNCSDFKGQRQQGTSPASGQ*PRAGCQ
Trigger: CTGACACCCTGCGCGTGGTCATTGACCGGATGCTGG...GGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR TCA 90 bp CAGTTGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTGGACCAGCATCCGGTCAATaGCCACGCGCAGGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: QLPFSTTSTVLESVLSLGPASGQ*PRAGCQ
Trigger: CTGACACCCTGCGCGTGGTCATTGACCGGATGCTGG...TCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR TCA 90 bp GGGCTGAGGTTTAGGCAAGGCCAATTCCTTCCCCTGTCTCATGGCATTAACGTTTGCTGTGCTGTCGTCTaGGGACCTGGCCCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: GLRFRQGQFLPLSHGINVCCAVV*GPGPGV
Trigger: GACACCAGGGCCAGGTCCTCAGACGACAGCACAGCA...AACGTTAATGCCATGAGACAGGGGAAGGAATTGGCCTTGCCTAAACCTCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR TCA 90 bp GTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGACATGGGAGGGCTGAATaGGGAGTGGATCAACTAACA +
Preference number: 4 (lower is better)
Translates to: VPTSKGRGNKALPAGGLGHGRAE*GVDQLT
Trigger: TGTTAGTTGATCCACTCCTCATTCAGCCCTCCCATG...TCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR TCA 90 bp CCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACCCATCTCCTGCAGGTGGAGCCTTCCTTGTGCATaGCACACACAAGAGACAGCA +
Preference number: 4 (lower is better)
Translates to: PGTMMVDQAFGAPISCRWSLPCA*HTQETA
Trigger: TGCTGTCTCTTGTGTGTGTCATGCACAAGGAAGGCT...CCACCTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR TCA 90 bp ATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGACCTGACTCACCCCTaGACATCGCAGTGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: IRSLWRKGLLRETSSSLGDLTHP*TSQCSE
Trigger: TTCAGAGCACTGCGATGTTCAGGGGTGAGTCAGGTC...CCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR TCA 90 bp CAGGTCGAGGCCCACCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAATCGACCTGACTCACCCCTaGACATCGCAGTGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: QVEAHLSWLQDAGCHLEIDLTHP*TSQCSE
Trigger: TTCAGAGCACTGCGATGTTCAGGGGTGAGTCAGGTC...GATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTCGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGCCCCTCCCCCAAGTCTaGCACAGCTTCTTAAGTCCA +
Preference number: 4 (lower is better)
Translates to: DQKSVEEGASEGDQLFPWPLPQV*HSFLSP
Trigger: TGGACTTAAGAAGCTGTGTCAGACTTGGGGGAGGGG...CCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GCTGGGTGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCTCAAGGCAGGTAACCTaGCGCATGCCACAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: AGCHLEIKVRWEGNEDLSSRQVT*RMPQPP
Trigger: TGGGGGCTGTGGCATGCGTCAGGTTACCTGCCTTGA...GCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000438141.5
ENST00000473661.5
CDS-3UTR TCA 90 bp ATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCTGCTGGGTGCCACCTTaGAATCAAGGTTCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: IVPTSKGRGNKALPAGGLCWVPP*NQGSVG
Trigger: TCCCACCGAACCTTGATTTCAAGGTGGCACCCAGCA...GAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR TCA 90 bp CGCACGCACACAGAGCTTCATCCACAAACTCTGGGGACACCAACACTGGGTTTTACTGTCCACTGGGTGTaGGTCACAGGTCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: RTHTELHPQTLGTPTLGFTVHWV*VTGRGP
Trigger: TGGGCCTCGACCTGTGACTCACACCCAGTGGACAGT...AAAACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAAGCTCTGTGTGCGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR TCA 90 bp TCTGTCCTTAGGTGGGAATTCTGGGCCTCGCTGCACGGAGGAGCTGCTGATGGCAGCTCACCACAGTTTTaGTCTTCCCAGGCTCAGGTA +
Preference number: 4 (lower is better)
Translates to: SVLRWEFWASLHGGAADGSSPQF*SSQAQV
Trigger: TACCTGAGCCTGGGAAGATCAAAACTGTGGTGAGCT...GCCATCAGCAGCTCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR TCA 90 bp CTTGGCTCCTGGCTTCACGATCCAGATGTTGCGATCCCCTTCCATGTCTATCTGCAGCAGGGTGGGGCCTaGGCGATGGACCATCTTCTT +
Preference number: 4 (lower is better)
Translates to: LGSWLHDPDVAIPFHVYLQQGGA*AMDHLL
Trigger: AAGAAGATGGTCCATCGCTCAGGCCCCACCCTGCTG...CAGATAGACATGGAAGGGGATCGCAACATCTGGATCGTGAAGCCAGGAGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000430390.5
CDS-3UTR TCA 90 bp GAACCTCTGGCTAGACCACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGCAGAAGTCGAACAGCTGTaGTGGCTGGAACTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: EPLARPHVVWRKQWMPMAEVEQL*WLELLV
Trigger: GACGAGGAGTTCCAGCCATCACAGCTGTTCGACTTC...TGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCAGAGGTTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
CDS-3UTR TCA 90 bp TGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGCAGGCTGCTTATAGATaGGCTCAAAGGCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: CSDFKGQRQQGTSSWGPRQAAYR*AQRLLC
Trigger: ACACAGGAGCCTTTGAGCTCATCTATAAGCAGCCTG...CCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430793.1
ENST00000473661.5
CDS-3UTR TCA 90 bp AGAGCAGGAGCCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAATCAAGGGAGTGTCGAGGTGCCTaGGTTCTGCCCCTTCGCATC +
Preference number: 4 (lower is better)
Translates to: RAGAFLGFRMLGATLKSRECRGA*VLPLRI
Trigger: GATGCGAAGGGGCAGAACTCAGGCACCTCGACACTC...CCTTGATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGCTCCTGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430390.5
CDS-3UTR GCA 90 bp TCAAACTTGGTGCCAAAGATGAGGAGGGGCCGCTCAATATACTTCTGCACCACCACGGCCTGCAGCTGCTaGAGGATGTCCTCACAGCGC +
Preference number: 4 (lower is better)
Translates to: SNLVPKMRRGRSIYFCTTTACSC*RMSSQR
Trigger: GCGCTGTGAGGACATCCTGCAGCAGCTGCAGGCCGT...GGTGGTGCAGAAGTATATTGAGCGGCCCCTCCTCATCTTTGGCACCAAGTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430390.5
CDS-3UTR GCA 90 bp GACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAACGGCCTGCAGCTGCTaGAGGATGTCCTCACAGCGC +
Preference number: 4 (lower is better)
Translates to: DLPTGARNCSDFKGQRQQTACSC*RMSSQR
Trigger: GCGCTGTGAGGACATCCTGCAGCAGCTGCAGGCCGT...TTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp TTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACTGGGGTACCACGGCCTaGAGCTGCTGCAGGATGTCC +
Preference number: 4 (lower is better)
Translates to: LTFRQVLGIVPTSKGRGNWGTTA*SCCRMS
Trigger: GGACATCCTGCAGCAGCTGCAGGCCGTGGTACCCCA...GTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp TTCATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACCCATCTCCTGCTCATCACCACGGGGTTaGCGTTCACCAGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: FMPGTMMVDQAFGAPISCSSPRG*RSPASA
Trigger: TGCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGA...GCAGGAGATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR GCA 90 bp TGTTGCACAGGTGCACTGAGTTGTCCAGGTTCTTCAGGGAGAAGGGCTGCGTGGTCATCACCACGGGGTTaGCGTTCACCAGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: CCTGALSCPGSSGRRAAWSSPRG*RSPASA
Trigger: TGCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGA...CCACGCAGCCCTTCTCCCTGAAGAACCTGGACAACTCAGTGCACCTGTGCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000431204.5
CDS-3UTR GCA 90 bp GCCGTCCTTCATCACCACGGGGTTGCCGTTCACCAGCTTCAGCATCTCCTCCAGGAGTTGTTGCACAGGTaGACTGAGTTGTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: AVLHHHGVAVHQLQHLLQELLHR*TELSRF
Trigger: GAACCTGGACAACTCAGTGCACCTGTGCAACAACTC...CTGGAGGAGATGCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGAAGGACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430390.5
CDS-3UTR GCA 90 bp GTTCAACCCACTACAACTAAGCAGTGCCACACTTTTCTTCAGGTGGGTGTGGCTGGGGCACCCATCTCCTaGAGGTGGGCCTGGAACCTC +
Preference number: 4 (lower is better)
Translates to: VQPTTTKQCHTFLQVGVAGAPIS*RWAWNL
Trigger: GAGGTTCCAGGCCCACCTGCAGGAGATGGGTGCCCC...AGCCACACCCACCTGAAGAAAAGTGTGGCACTGCTTAGTTGTAGTGGGTTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR GCA 90 bp CTAGGCTTGAGGCCTGTTCTGGTTCCAGAACCTGATCATGACTTGCCCCATTTTGGGGCACCCATCTCCTaGAGGTGGGCCTGGAACCTC +
Preference number: 4 (lower is better)
Translates to: LGLRPVLVPEPDHDLPHFGAPIS*RWAWNL
Trigger: GAGGTTCCAGGCCCACCTGCAGGAGATGGGTGCCCC...AAAATGGGGCAAGTCATGATCAGGTTCTGGAACCAGAACAGGCCTCAAGCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR GCA 90 bp TTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGCTGGGAGGTCTGAAGTaGGTGGATCACAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: LFRLQRAEATRHFQLGASLGGLK*VDHSIL
Trigger: AAGGATGCTGTGATCCACGCACTTCAGACCTCCCAG...CGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCTGGCCTTCCGACACTaGACGGTGTCCTGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: RQVLGIVPTSKGRGNKALLAFRH*TVSWEV
Trigger: GACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAG...AAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CGCACACAGAGCTTCATCCACAAACTCTGGGGACACCAACACTGGGTTTTTCTCGACTGCTGTGGAGGGTaGCATCGTGGGGCTGGCGTT +
Preference number: 4 (lower is better)
Translates to: RTQSFIHKLWGHQHWVFLDCCGG*HRGAGV
Trigger: AACGCCAGCCCCACGATGGCACCCTCCACAGCAGTC...GAGAAAAACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAAGCTCTGTGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR GCA 90 bp ACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCGACTGCTGTGGAGGGTaGCATCGTGGGGCTGGCGTT +
Preference number: 4 (lower is better)
Translates to: TGARNCSDFKGQRQQGTSDCCGG*HRGAGV
Trigger: AACGCCAGCCCCACGATGGCACCCTCCACAGCAGTC...GGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp TGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTGGACTTCGACTGCTGTGGAGGGTaGCATCGTGGGGCTGGCGTT +
Preference number: 4 (lower is better)
Translates to: CLSAQPPLFWRVCLALDFDCCGG*HRGAGV
Trigger: AACGCCAGCCCCACGATGGCACCCTCCACAGCAGTC...GAAGTCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR GCA 90 bp GACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGAGCCGGGCAGTGACTaGTGTGGAGGGTGCCATCGT +
Preference number: 4 (lower is better)
Translates to: DLPTGARNCSDFKGQRQQEPGSD*CGGCHR
Trigger: ACGATGGCACCCTCCACAGCAGTCACTGCCCGGCTC...TTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CTTGAATTTGCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACCGCAGGGTGTCAGCTTaGACGCCAGCACAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: LEFAFGLDLPTGARNCSDRRVSA*TPAQSR
Trigger: CCGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCG...GTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAAATTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CAGGTCGAGGCCCACCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAATCCTCCTGTGTCACAGTTaGGGTCCAGCATCCGGTCAA +
Preference number: 4 (lower is better)
Translates to: QVEAHLSWLQDAGCHLEILLCHS*GPASGQ
Trigger: TTGACCGGATGCTGGACCGCAACTGTGACACAGGAG...GATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTCGACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GAGCTCAAAGGCTCCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACCTCCTGTGTCACAGTTaGGGTCCAGCATCCGGTCAA +
Preference number: 4 (lower is better)
Translates to: ELKGSCVTVAVQHPVNDHLLCHS*GPASGQ
Trigger: TTGACCGGATGCTGGACCGCAACTGTGACACAGGAG...GTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCCTTTGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR GCA 90 bp ATAGGGTATGACTTCCACTCAGACTTCACCACCAGCTTGAGAACGTTGCGGGCAGGCCAGGGGATACCCTaGTCAGCCCCTAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: IGYDFHSDFTTSLRTLRAGQGIP*SAPRLE
Trigger: CTCAAGCCTAGGGGCTGAGCAGGGTATCCCCTGGCC...TGCCCGCAACGTTCTCAAGCTGGTGGTGAAGTCTGAGTGGAAGTCATACCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
CDS-3UTR GCA 90 bp CGCACGCACACAGAGCTTCATCCACAAACTCTGGGGACACCAACACTGGGTTTTCAGCCAGAAGTCCTCTaGTCCCAGGCCAGGGGATAC +
Preference number: 4 (lower is better)
Translates to: RTHTELHPQTLGTPTLGFQPEVL*SQARGY
Trigger: GTATCCCCTGGCCTGGGAGCAGAGGACTTCTGGCTG...AAAACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAAGCTCTGTGTGCGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000496246.5
CDS-3UTR GCA 90 bp CAGTTCCTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGGGGTGCTCGGCTACATaGCAGGCCCATGGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: QFLREQLAPFVFCLLLSQGCSAT*QAHGRA
Trigger: AGCCCTCCCATGGGCCTGGCATGTAGCCGAGCACCC...CTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAGGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR GCA 90 bp ACCACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGCATGAGTTCTCCAGGTCTGGAGAGCTGCCTCTaGTTCCCTGAATCCCTCGCT +
Preference number: 4 (lower is better)
Translates to: TTCCLAEAVDADGMSSPGLESCL*FPESLA
Trigger: AGCGAGGGATTCAGGGAAGCAGAGGCAGCTCTCCAG...ACCTGGAGAACTCATGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR GCA 90 bp GCTGGGTGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCACCCGAGGCCCTTGTaGCCCTTATCCTGGCACACA +
Preference number: 4 (lower is better)
Translates to: AGCHLEIKVRWEGNEDLSHPRPL*PLSWHT
Trigger: TGTGTGCCAGGATAAGGGGCACAAGGGCCTCGGGTG...GCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR GCA 90 bp AAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAACACTAACTTCTGTGTaGACTGTTACTGCACAAGGC +
Preference number: 4 (lower is better)
Translates to: KGLLRETSSSLGVPASLGTLTSV*TVTAQG
Trigger: GCCTTGTGCAGTAACAGTGCACACAGAAGTTAGTGT...TCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR GCA 90 bp TCAAAGGCTCCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACGCGCAGGCTCTGCCTAAAATaGACCTGGGAGTCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SKAPVSQLRSSIRSMTTRRLCLK*TWESWP
Trigger: AGGCCAAGACTCCCAGGTGCATTTTAGGCAGAGCCT...GCGCGTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR GCA 90 bp ATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGAGTCCTCAAGGCCTTaGCTGTGGTCGACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: MIRSLWRKGLLRETSSSLESSRP*LWSTGP
Trigger: AGGCCCTGTCGACCACAGGCAAGGCCTTGAGGACTC...AAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp TTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTTGTTCTCTGGCCAGCCCTGACCCCGTaGTCAGCACTGTCCACTGGG +
Preference number: 4 (lower is better)
Translates to: LTFLCPVGVILLAWLVLWPALTP*SALSTG
Trigger: CCCAGTGGACAGTGCTGAGCACGGGGTCAGGGCTGG...CCAGAGAACAAGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR GCA 90 bp GAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCTATCCCCCAGGCCCCTaGGCCTCTGGAATGTACCAA +
Preference number: 4 (lower is better)
Translates to: EMIRSLWRKGLLRETSSSYPPGP*ASGMYQ
Trigger: TTGGTACATTCCAGAGGCGCAGGGGCCTGGGGGATA...GGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR GCA 90 bp GCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAATTCTGGGCCTCGCTaGACGGAGGAGCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: ALTFRQVLGIVPTSKGRGNSGPR*TEELLM
Trigger: CATCAGCAGCTCCTCCGTGCAGCGAGGCCCAGAATT...GCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR GCA 90 bp CCTGAGTTCTGCCCCTTCGTGGACCACTTGGTAGTAGCGCTGGAGGAAGAGGGAAAACCTGCAGAAAGATaGGGAATAGGGGCGGGGTAC +
Preference number: 4 (lower is better)
Translates to: PEFCPFVDHLVVALEEEGKPAER*GIGAGY
Trigger: GTACCCCGCCCCTATTCCGCATCTTTCTGCAGGTTT...TCCCTCTTCCTCCAGCGCTACTACCAAGTGGTCCACGAAGGGGCAGAACTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR GCA 90 bp GTCCTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCATGCCAGGCACGATGAGGTGCCTGAGTTCTaGCCCTTCGCATCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: VLGGLKCVDHSILHARHDEVPEF*PFASEH
Trigger: ATGCTCTGATGCGAAGGGGCAGAACTCAGGCACCTC...ATCGTGCCTGGCATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430390.5
CDS-3UTR CCA 90 bp CCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCTTATCATCTGATCCTTaGAGAGGAAGCGACAGTCGA +
Preference number: 4 (lower is better)
Translates to: PTSKGRGNKALPAGGLGGLSSDP*RGSDSR
Trigger: TCGACTGTCGCTTCCTCTCCAAGGATCAGATGATAA...GCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR CCA 90 bp TTCTCTCTGGCAGACTTGCTGGCCTCCAGTGTAGCCCGCACCTCCCAGGCTCTCTTCATCCACAAACTCTaGGGACACCAACACTGGGTT +
Preference number: 4 (lower is better)
Translates to: FSLADLLASSVARTSQALFIHKL*GHQHWV
Trigger: AACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAA...GAGAGCCTGGGAGGTGCGGGCTACACTGGAGGCCAGCAAGTCTGCCAGAGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CCA 90 bp CAGGCCAGGGGATACCCTGCTCAGCCCCTAGGCTTGAGGCCTGTTCTGGTTCCATTCATCCACAAACTCTaGGGACACCAACACTGGGTT +
Preference number: 4 (lower is better)
Translates to: QARGYPAQPLGLRPVLVPFIHKL*GHQHWV
Trigger: AACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAA...TGGAACCAGAACAGGCCTCAAGCCTAGGGGCTGAGCAGGGTATCCCCTGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
CDS-3UTR CCA 90 bp TATTTGGTGTTGGATCCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCCCTTCCATGTCTATCTaGGGTACCACGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: YLVLDPGQGQWGIEAGASPSMSI*GTTACS
Trigger: GCTGCAGGCCGTGGTACCCCAGATAGACATGGAAGG...GGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAACACCAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CAGGAGAGCAGGAGCCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAATCCCTTCCATGTCTATCTaGGGTACCACGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QESRSLSWLQDAGCHLEIPSMSI*GTTACS
Trigger: GCTGCAGGCCGTGGTACCCCAGATAGACATGGAAGG...GATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGCTCCTGCTCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000438141.5
CDS-3UTR CCA 90 bp ACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCCTCGTCCGCGGGACTTaGCTCCTGGCTTCACGATCC +
Preference number: 4 (lower is better)
Translates to: TGARNCSDFKGQRQQGTSLVRGT*LLASRS
Trigger: GGATCGTGAAGCCAGGAGCCAAGTCCCGCGGACGAG...GGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GTCCTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCATGCCAGGCACGATAGACCACATGTTGTCTaGCGGAAGCAGTGGATGCCG +
Preference number: 4 (lower is better)
Translates to: VLGGLKCVDHSILHARHDRPHVV*RKQWMP
Trigger: CGGCATCCACTGCTTCCGCCAGACAACATGTGGTCT...ATCGTGCCTGGCATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGAGACCACATGTTGTCTaGCGGAAGCAGTGGATGCCG +
Preference number: 4 (lower is better)
Translates to: DQKSVEEGASEGDQLFPWRPHVV*RKQWMP
Trigger: CGGCATCCACTGCTTCCGCCAGACAACATGTGGTCT...CCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TTGTCTGGCGGAAGCAGTGGATGCCGATGGCATGAGTTCTCCAGGTGCTTCTGGAGACCACATGTTGTCTaGCGGAAGCAGTGGATGCCG +
Preference number: 4 (lower is better)
Translates to: LSGGSSGCRWHEFSRCFWRPHVV*RKQWMP
Trigger: CGGCATCCACTGCTTCCGCCAGACAACATGTGGTCT...CCAGAAGCACCTGGAGAACTCATGCCATCGGCATCCACTGCTTCCGCCAGACAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TCAGAGCGCAGTGGCGTGATCACAGCTCACCACAGTTTTGATCTTCCCAGGCTCGGTGGACCAAGCATTTaGGGCACCCATCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SERSGVITAHHSFDLPRLGGPSI*GTHLLQ
Trigger: CTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACC...GAGCCTGGGAAGATCAAAACTGTGGTGAGCTGTGATCACGCCACTGCGCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp GATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTGGTGGACCAAGCATTTaGGGCACCCATCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: DDQKSVEEGASEGDQLFPGGPSI*GTHLLQ
Trigger: CTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACC...AGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACGGTGGACCAAGCATTTaGGGCACCCATCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GEEGDDQKSVEEGASEGDGGPSI*GTHLLQ
Trigger: CTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACC...GTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp ATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGCATAGAGCTCAAAGCTaGCCTTCCGACACTGCACGG +
Preference number: 4 (lower is better)
Translates to: IRSLWRKGLLRETSSSLGHRAQS*PSDTAR
Trigger: CCGTGCAGTGTCGGAAGGCCAGCTTTGAGCTCTATG...CCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GGGGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGCATAGAGCTCAAAGCTaGCCTTCCGACACTGCACGG +
Preference number: 4 (lower is better)
Translates to: GEKREMIRSLWRKGLLREHRAQS*PSDTAR
Trigger: CCGTGCAGTGTCGGAAGGCCAGCTTTGAGCTCTATG...CTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp AAGTGCGTGGATCACAGCATCCTTCATGCCAGGCACGATGATGGTGGACCAAGCTCAATCAGCCAGGGCTaGAAGTCCTCCCCGAACACG +
Preference number: 4 (lower is better)
Translates to: KCVDHSILHARHDDGGPSSISQG*KSSPNT
Trigger: CGTGTTCGGGGAGGACTTCCAGCCCTGGCTGATTGA...GCTTGGTCCACCATCATCGTGCCTGGCATGAAGGATGCTGTGATCCACGCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAATGGCGGGAACCTaGGAGGCGGAGCTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: PLALTFRQVLGIVPTSKGRMAGT*EAELAV
Trigger: CACTGCAAGCTCCGCCTCCCAGGTTCCCGCCATTCT...GCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR CCA 90 bp GCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCATGCCAGTTTGGGAGGCTGAGGTaGATGGATCATGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: ARCPGRSEVRGSQHPSCQFGRLR*MDHEVR
Trigger: CCTGACCTCATGATCCATCCACCTCAGCCTCCCAAA...CTGGCATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGACACCGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
CDS-3UTR CCA 90 bp AAGGTACTCCTCGCACGCACACAGAGCTTCATCCACAAACTCTGGGGACACCAAGCTCCTGTTTCAGGCTaGTCACGGTGGCTGACGCCT +
Preference number: 4 (lower is better)
Translates to: KVLLARTQSFIHKLWGHQAPVSG*SRWLTP
Trigger: AGGCGTCAGCCACCGTGACCAGCCTGAAACAGGAGC...TTGGTGTCCCCAGAGTTTGTGGATGAAGCTCTGTGTGCGTGCGAGGAGTACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000496246.5
CDS-3UTR CCA 90 bp CCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACGCGCAGGGTGTCATGGAGGATAAATGGGTaGGAGAGTGGAGGTAACCAC +
Preference number: 4 (lower is better)
Translates to: PVSQLRSSIRSMTTRRVSWRING*ESGGNH
Trigger: GTGGTTACCTCCACTCTCCCACCCATTTATCCTCCA...TGACACCCTGCGCGTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR CCA 90 bp AGTGCTCGGCAGTTCTGGCAATATGTCCCTGCGTCGACTCACTGCCACGTGATCAGGTGGAAGGGCGGATaGGTGGAGGATAAATGGGTG +
Preference number: 4 (lower is better)
Translates to: SARQFWQYVPASTHCHVIRWKGG*VEDKWV
Trigger: CACCCATTTATCCTCCACCCATCCGCCCTTCCACCT...GATCACGTGGCAGTGAGTCGACGCAGGGACATATTGCCAGAACTGCCGAGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR CCA 90 bp GTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACGCGCAGGGTGTCAGCTCCTGGGACAGAAGAATaGATGAGTGGATGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: VSQLRSSIRSMTTRRVSAPGTEE*MSGWPE
Trigger: TTCAGGCCATCCACTCATCCATTCTTCTGTCCCAGG...AGCTGACACCCTGCGCGTGGTCATTGACCGGATGCTGGACCGCAACTGTGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR CCA 90 bp ATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGTCGCTGATGGGTCCCTaGATTACAGGACTAGGAGCC +
Preference number: 4 (lower is better)
Translates to: IRSLWRKGLLRETSSSLGSLMGP*ITGLGA
Trigger: GGCTCCTAGTCCTGTAATCCAGGGACCCATCAGCGA...CCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCTCTAGCACTTGCCCTTaGCTCCCACTGTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: ALTFRQVLGIVPTSKGRGSSTCP*LPLSQD
Trigger: GTCCTGGGACAGTGGGAGCCAAGGGCAAGTGCTAGA...GCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCGTGGGTAGAGTCGGCTCAGCCTCTTCATaGGGCAGGCCTCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LKSRFGGREMKTLAVGRVGSASS*GRPQPW
Trigger: CCAGGGCTGAGGCCTGCCCCATGAAGAGGCTGAGCC...GACTCTACCCACGGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CTTGAATTTGCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACGGCTCAGCCTCTTCATaGGGCAGGCCTCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LEFAFGLDLPTGARNCSDGSASS*GRPQPW
Trigger: CCAGGGCTGAGGCCTGCCCCATGAAGAGGCTGAGCC...GTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAAATTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp ATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTAGGCCCCTGCGCCTCTaGAATGTACCAACAAGGGGC +
Preference number: 4 (lower is better)
Translates to: MIRSLWRKGLLRETSSSLRPLRL*NVPTRG
Trigger: GCCCCTTGTTGGTACATTCCAGAGGCGCAGGGGCCT...AAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR CCA 90 bp TCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTTCTTGCTGTGGACCCTaGGGTACACGGCCTCGCCCC +
Preference number: 4 (lower is better)
Translates to: SHGINVPMPGRCHSASLASCCGP*GTRPRP
Trigger: GGGGCGAGGCCGTGTACCCCAGGGTCCACAGCAAGA...AGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAATGCCATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp AGTTTCTTCATCTGTAAAGTGAAGGCTCACGCTCCCCACCCCTGGATCGGAGATCTCAGGCTCTTGCTGTaGACCCTGGGGTACACGGCC +
Preference number: 4 (lower is better)
Translates to: SFFICKVKAHAPHPWIGDLRLLL*TLGYTA
Trigger: GGCCGTGTACCCCAGGGTCCACAGCAAGAGCCTGAG...ATCTCCGATCCAGGGGTGGGGAGCGTGAGCCTTCACTTTACAGATGAAGAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp GGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCTTAGGTGGGAATTCTaGGCCTCGCTGCACGGAGGA +
Preference number: 4 (lower is better)
Translates to: GDDQKSVEEGASEGDQLFLRWEF*ASLHGG
Trigger: TCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAG...GAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR CCA 90 bp TCAGAGCGCAGTGGCGTGATCACAGCTCACCACAGTTTTGATCTTCCCAGGCTCCTTAGGTGGGAATTCTaGGCCTCGCTGCACGGAGGA +
Preference number: 4 (lower is better)
Translates to: SERSGVITAHHSFDLPRLLRWEF*ASLHGG
Trigger: TCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAG...GAGCCTGGGAAGATCAAAACTGTGGTGAGCTGTGATCACGCCACTGCGCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp TCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTGGGGAAACTGGTGCGTaGCTCGAGCGGCTGCGGCTT +
Preference number: 4 (lower is better)
Translates to: SHGINVPMPGRCHSASLAGETGA*LERLRL
Trigger: AAGCCGCAGCCGCTCGAGCCACGCACCAGTTTCCCC...AGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAATGCCATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR CCA 90 bp ATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGAAGTGGTGACGGGCTaGGTCTGCATCCCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: MIRSLWRKGLLRETSSSLEVVTG*VCIPAV
Trigger: CACAGCTGGGATGCAGACCCAGCCCGTCACCACTTC...AAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443148.5
ENST00000473661.5
3UTR CAA 72 bp GCCTCCAGGTCCTTGTCGATGTCCATGTGGGCCAAGTaGCTAAGGTACTCCTCGCACGCACACAGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: ASRSLSMSMWAK*LRYSSHAHRAS
Trigger: TGAAGCTCTGTGTGCGTGCGAGGAGTACCTTAGCAACTTGGCCCACATGGACATCGACAAGGACCTGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR TCA 90 bp CTTGGCTCCTGGCTTCACGATCCAGATGTTGCGATCCCCTTCCATGTCTATCTGACTTCACCACCAGCTTaGGAACGTTGCGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LGSWLHDPDVAIPFHVYLTSPPA*ERCGQQ
Trigger: CTGCTGCCCGCAACGTTCTCAAGCTGGTGGTGAAGT...CAGATAGACATGGAAGGGGATCGCAACATCTGGATCGTGAAGCCAGGAGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR TCA 90 bp ACCACCAGCTTGAGAACGTTGCGGGCAGCAGTCAGCCAGAAGTCCTCTGCTCCCTCTTCCTCTACTGCCTaGATAGGGTATGACTTCCAC +
Preference number: 4 (lower is better)
Translates to: TTSLRTLRAAVSQKSSAPSSSTA*IGYDFH
Trigger: GTGGAAGTCATACCCTATTCAGGCAGTAGAGGAAGA...GGGAGCAGAGGACTTCTGGCTGACTGCTGCCCGCAACGTTCTCAAGCTGGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
CDS-3UTR TCA 90 bp TTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACTCACAGCGCTGGACCTaGGTGTCGAGGTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: LTFRQVLGIVPTSKGRGNSQRWT*VSRCLS
Trigger: ACTCAGGCACCTCGACACTCAGGTCCAGCGCTGTGA...GTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCAGTTGCACAGGTGCACTaGGTTGTCCAGGTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: DTARCPGRSEVRGSQHPSVAQVH*VVQVLQ
Trigger: CTGAAGAACCTGGACAACTCAGTGCACCTGTGCAAC...TGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR TCA 90 bp TGTTGCACAGGTGCACTGAGTTGTCCAGGTTCTTCAGGGAGAAGGGCTGCGTGGGTTGCACAGGTGCACTaGGTTGTCCAGGTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: CCTGALSCPGSSGRRAAWVAQVH*VVQVLQ
Trigger: CTGAAGAACCTGGACAACTCAGTGCACCTGTGCAAC...CCACGCAGCCCTTCTCCCTGAAGAACCTGGACAACTCAGTGCACCTGTGCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000431204.5
CDS-3UTR TCA 90 bp TGGAACCTCTGGCTAGACCACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGTCATGCCAGGCACGATaGTGGTGGACCAAGCATTTG +
Preference number: 4 (lower is better)
Translates to: WNLWLDHMLSGGSSGCRWSCQAR*WWTKHL
Trigger: CAAATGCTTGGTCCACCATCATCGTGCCTGGCATGA...CCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCAGAGGTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR TCA 90 bp AGAGCAGGAGCCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAATCAAGGGTGTCCTGGGAGGTCTaGAGTGCGTGGATCACAGCA +
Preference number: 4 (lower is better)
Translates to: RAGAFLGFRMLGATLKSRVSWEV*SAWITA
Trigger: TGCTGTGATCCACGCACTTCAGACCTCCCAGGACAC...CCTTGATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGCTCCTGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000438141.5
CDS-3UTR TCA 90 bp TTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTTGTTCTCTGGTGCTGTGCTGTCGTCTaGGGACCTGGCCCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: LTFLCPVGVILLAWLVLWCCAVV*GPGPGV
Trigger: GACACCAGGGCCAGGTCCTCAGACGACAGCACAGCA...CCAGAGAACAAGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR TCA 90 bp GCTGGGTGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCGGCCCATGGGAGGGCTaGATGAGGAGTGGATCAACT +
Preference number: 4 (lower is better)
Translates to: AGCHLEIKVRWEGNEDLSGPWEG*MRSGST
Trigger: AGTTGATCCACTCCTCATTCAGCCCTCCCATGGGCC...GCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR TCA 90 bp ATCACAGCATCCTTCATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGGCATCCTCCTCAGAGACCTaGACTCCTCACAGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: ITASFMPGTMMVDQAFGASSSET*TPHRQG
Trigger: TCCCTGCCTGTGAGGAGTTCAGGTCTCTGAGGAGGA...TGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCATGAAGGATGCTGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR TCA 90 bp GATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTGCACATCTACAGACCTaGCTCACCCCTGAACATCGC +
Preference number: 4 (lower is better)
Translates to: DDQKSVEEGASEGDQLFPAHLQT*LTPEHR
Trigger: GCGATGTTCAGGGGTGAGTCAGGTCTGTAGATGTGC...AGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR TCA 90 bp AATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTGAACCCAGTTATACATaGACGCCCCTCCCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: NCSDFKGQRQQGTSSWGPEPSYT*TPLPQV
Trigger: GACTTGGGGGAGGGGCGTTCATGTATAACTGGGTTC...AGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR TCA 90 bp TTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACTCAAGGCAGGTAACCTaGCGCATGCCACAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LTFRQVLGIVPTSKGRGNSRQVT*RMPQPP
Trigger: TGGGGGCTGTGGCATGCGTCAGGTTACCTGCCTTGA...GTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR TCA 90 bp ACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCATTGCTGGGTGCCACCTTaGAATCAAGGTTCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: TLHGVLGGLKCVDHSILHCWVPP*NQGSVG
Trigger: TCCCACCGAACCTTGATTTCAAGGTGGCACCCAGCA...ATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR TCA 90 bp TCACGATCCAGATGTTGCGATCCCCTTCCATGTCTATCTGGGGTACCACGGCCTTGCTGGGTGCCACCTTaGAATCAAGGTTCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: SRSRCCDPLPCLSGVPRPCWVPP*NQGSVG
Trigger: TCCCACCGAACCTTGATTTCAAGGTGGCACCCAGCA...AGGCCGTGGTACCCCAGATAGACATGGAAGGGGATCGCAACATCTGGATCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000430390.5
CDS-3UTR TCA 90 bp ATGAGCTCAAAGGCTCCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCTGCTGGGTGCCACCTTaGAATCAAGGTTCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: MSSKAPVSQLRSSIRSMTCWVPP*NQGSVG
Trigger: TCCCACCGAACCTTGATTTCAAGGTGGCACCCAGCA...GGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCCTTTGAGCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GGCCAATTCCTTCCCCTGTCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTCGCCCCATCCACTCTTaGCCCTCCAACAGCAATGGA +
Preference number: 4 (lower is better)
Translates to: GQFLPLSHGINVPMPGRCRPIHS*PSNSNG
Trigger: TCCATTGCTGTTGGAGGGTCAAGAGTGGATGGGGCG...ACACCTACCGGGCATAGGAACGTTAATGCCATGAGACAGGGGAAGGAATTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR TCA 90 bp TCAGAGCGCAGTGGCGTGATCACAGCTCACCACAGTTTTGATCTTCCCAGGCTCACCTTGGCCCCTTGCTaGAGAAGGGATAGACCCATG +
Preference number: 4 (lower is better)
Translates to: SERSGVITAHHSFDLPRLTLAPC*RRDRPM
Trigger: CATGGGTCTATCCCTTCTTCAGCAAGGGGCCAAGGT...GAGCCTGGGAAGATCAAAACTGTGGTGAGCTGTGATCACGCCACTGCGCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR TCA 90 bp ATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACCCATCTCCTGCAGGAGATTTTGGCGTTTCTaGGCCGGTTCATGTGAGACG +
Preference number: 4 (lower is better)
Translates to: MPGTMMVDQAFGAPISCRRFWRF*AGSCET
Trigger: CGTCTCACATGAACCGGCTCAGAAACGCCAAAATCT...CCTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000431204.5
CDS-3UTR TCA 90 bp GACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAACAGCAGGGTGGGGCCTaGGCGATGGACCATCTTCTT +
Preference number: 4 (lower is better)
Translates to: DLPTGARNCSDFKGQRQQQQGGA*AMDHLL
Trigger: AAGAAGATGGTCCATCGCTCAGGCCCCACCCTGCTG...TTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000430390.5
CDS-3UTR TCA 90 bp TTGTCTGGCGGAAGCAGTGGATGCCGATGGCATGAGTTCTCCAGGTGCTTCTGGACTGTCACCCATCGCTaGGCTATCCAGATCCTTCTG +
Preference number: 4 (lower is better)
Translates to: LSGGSSGCRWHEFSRCFWTVTHR*AIQILL
Trigger: CAGAAGGATCTGGATAGCTCAGCGATGGGTGACAGT...CCAGAAGCACCTGGAGAACTCATGCCATCGGCATCCACTGCTTCCGCCAGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
CDS-3UTR TCA 90 bp CAGGTTCTTCAGGGAGAAGGGCTGCGTGGAAAAGCGGATATAGCTGTCGCGGTAGAAGTCGAACAGCTGTaGTGGCTGGAACTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: QVLQGEGLRGKADIAVAVEVEQL*WLELLV
Trigger: GACGAGGAGTTCCAGCCATCACAGCTGTTCGACTTC...TACCGCGACAGCTATATCCGCTTTTCCACGCAGCCCTTCTCCCTGAAGAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000431204.5
CDS-3UTR TCA 90 bp TGTGGCTTATTGGATGTTTCATTTTTAGGTGACCTTGGCCCCTTGCTGAAGAAGCATCTGCCGCCTGCGTaGCCCTCCTCGGACTGGGCG +
Preference number: 4 (lower is better)
Translates to: CGLLDVSFLGDLGPLLKKHLPPA*PSSDWA
Trigger: CGCCCAGTCCGAGGAGGGTCACGCAGGCGGCAGATG...CTTCTTCAGCAAGGGGCCAAGGTCACCTAAAAATGAAACATCCAATAAGCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR TCA 90 bp TTCACCACCAGCTTGAGAACGTTGCGGGCAGCAGTCAGCCAGAAGTCCTCTGCTTCCTGGCTAACACAGTaGAACCCCGTCTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: FTTSLRTLRAAVSQKSSASWLTQ*NPVSLW
Trigger: CCACAAAGAGACGGGGTTTCACTGTGTTAGCCAGGA...AGCAGAGGACTTCTGGCTGACTGCTGCCCGCAACGTTCTCAAGCTGGTGGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474948.5
CDS-3UTR TCA 90 bp TTCACCACCAGCTTGAGAACGTTGCGGGCAGCAGTCAGCCAGAAGTCCTCTGCTTCCTGGCTAACACAGTaGAACCCCGTCTCATCAGAG +
Preference number: 4 (lower is better)
Translates to: FTTSLRTLRAAVSQKSSASWLTQ*NPVSSE
Trigger: CTCTGATGAGACGGGGTTTCACTGTGTTAGCCAGGA...AGCAGAGGACTTCTGGCTGACTGCTGCCCGCAACGTTCTCAAGCTGGTGGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496246.5
CDS-3UTR GCA 90 bp ATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGAGGTGCCTGAGTTCTaGCCCTTCGTGGACCACTTG +
Preference number: 4 (lower is better)
Translates to: MIRSLWRKGLLRETSSSLEVPEF*PFVDHL
Trigger: CAAGTGGTCCACGAAGGGGCAGAACTCAGGCACCTC...AAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp TCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTTGGGGTACCACGGCCTaGAGCTGCTGCAGGATGTCC +
Preference number: 4 (lower is better)
Translates to: SHGINVPMPGRCHSASLAWGTTA*SCCRMS
Trigger: GGACATCCTGCAGCAGCTGCAGGCCGTGGTACCCCA...AGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAATGCCATGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR GCA 90 bp GGTGGGTGTGGCTTATTGGATGTTTCATTTTTAGGTGACCTTGGCCCCTTGCTGTGGGGTACCACGGCCTaGAGCTGCTGCAGGATGTCC +
Preference number: 4 (lower is better)
Translates to: GGCGLLDVSFLGDLGPLLWGTTA*SCCRMS
Trigger: GGACATCCTGCAGCAGCTGCAGGCCGTGGTACCCCA...CAGCAAGGGGCCAAGGTCACCTAAAAATGAAACATCCAATAAGCCACACCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR GCA 90 bp TTGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTGGACTTTGGGGTACCACGGCCTaGAGCTGCTGCAGGATGTCC +
Preference number: 4 (lower is better)
Translates to: LPFSTTSTVLESVLSLGLWGTTA*SCCRMS
Trigger: GGACATCCTGCAGCAGCTGCAGGCCGTGGTACCCCA...AAGTCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR GCA 90 bp ACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCATTCATCACCACGGGGTTaGCGTTCACCAGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: TLHGVLGGLKCVDHSILHSSPRG*RSPASA
Trigger: TGCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGA...ATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR GCA 90 bp TGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGTCTGGATGGAGTTGTTaGACAGGTGCACTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: CSDFKGQRQQGTSSWGPRSGWSC*TGALSC
Trigger: ACAACTCAGTGCACCTGTGCAACAACTCCATCCAGA...CCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp AGTGCTCGGCAGTTCTGGCAATATGTCCCTGCGTCGACTCACTGCCACGTGATCCTGGGAGGTCTGAAGTaGGTGGATCACAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: SARQFWQYVPASTHCHVILGGLK*VDHSIL
Trigger: AAGGATGCTGTGATCCACGCACTTCAGACCTCCCAG...GATCACGTGGCAGTGAGTCGACGCAGGGACATATTGCCAGAACTGCCGAGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR GCA 90 bp ATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCCTGGGAGGTCTGAAGTaGGTGGATCACAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: IVPTSKGRGNKALPAGGLLGGLK*VDHSIL
Trigger: AAGGATGCTGTGATCCACGCACTTCAGACCTCCCAG...GAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CAGTTCCTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGCTGGCCTTCCGACACTaGACGGTGTCCTGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: QFLREQLAPFVFCLLLSQLAFRH*TVSWEV
Trigger: GACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAG...CTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAGGAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR GCA 90 bp GTTCAACCCACTACAACTAAGCAGTGCCACACTTTTCTTCAGGTGGGTGTGGCTGACTGCTGTGGAGGGTaGCATCGTGGGGCTGGCGTT +
Preference number: 4 (lower is better)
Translates to: VQPTTTKQCHTFLQVGVADCCGG*HRGAGV
Trigger: AACGCCAGCCCCACGATGGCACCCTCCACAGCAGTC...AGCCACACCCACCTGAAGAAAAGTGTGGCACTGCTTAGTTGTAGTGGGTTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR GCA 90 bp TCAGTTCCTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCACGCAGGGTGTCAGCTTaGACGCCAGCACAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: SVPSGATRTFCFLSAAFSRRVSA*TPAQSR
Trigger: CCGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCG...TGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAGGAACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR GCA 90 bp GATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTCTCCTGTGTCACAGTTaGGGTCCAGCATCCGGTCAA +
Preference number: 4 (lower is better)
Translates to: DDQKSVEEGASEGDQLFPLLCHS*GPASGQ
Trigger: TTGACCGGATGCTGGACCGCAACTGTGACACAGGAG...AGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GGGCTGAGGTTTAGGCAAGGCCAATTCCTTCCCCTGTCTCATGGCATTAACGTTCCCACCAGCTTGCTGTaGTGTCGTCTGAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: GLRFRQGQFLPLSHGINVPTSLL*CRLRTW
Trigger: CCAGGTCCTCAGACGACAGCACAGCAAGCTGGTGGG...AACGTTAATGCCATGAGACAGGGGAAGGAATTGGCCTTGCCTAAACCTCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR GCA 90 bp TTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACCCCACCAGCTTGCTGTaGTGTCGTCTGAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: LTFRQVLGIVPTSKGRGNPTSLL*CRLRTW
Trigger: CCAGGTCCTCAGACGACAGCACAGCAAGCTGGTGGG...GTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp ACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGCCCACCAGCTTGCTGTaGTGTCGTCTGAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: TFRQVLGIVPTSKGRGNKPTSLL*CRLRTW
Trigger: CCAGGTCCTCAGACGACAGCACAGCAAGCTGGTGGG...CTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGACCTGAGTTTAGAACTTaGTCCTGTTTCAGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: VPTSKGRGNKALPAGGLGPEFRT*SCFRLV
Trigger: GACCAGCCTGAAACAGGAGCAAGTTCTAAACTCAGG...TCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGAACCTGATCATGACTTaGCCCATTTTGGATCCAGAA +
Preference number: 4 (lower is better)
Translates to: VEEGASEGDQLFPWGASQNLIMT*PILDPE
Trigger: TTCTGGATCCAAAATGGGGCAAGTCATGATCAGGTT...CTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
CDS-3UTR GCA 90 bp AGGGGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGATCCTTCCTGGAGAGCTaGCTCTGCTTCCCTGAATCC +
Preference number: 4 (lower is better)
Translates to: RGEEGDDQKSVEEGASEGSFLES*LCFPES
Trigger: GGATTCAGGGAAGCAGAGGCAGCTCTCCAGGAAGGA...TCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR GCA 90 bp AGCATCCTTCATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACCCATTCCTTCCTGGAGAGCTaGCTCTGCTTCCCTGAATCC +
Preference number: 4 (lower is better)
Translates to: SILHARHDDGGPSIWGTHSFLES*LCFPES
Trigger: GGATTCAGGGAAGCAGAGGCAGCTCTCCAGGAAGGA...ATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCATGAAGGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR GCA 90 bp AGCTGGCCTTCCGACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGATCAACCAAGCCTTCCTTGTaGATGACACACACAAGAGAC +
Preference number: 4 (lower is better)
Translates to: SWPSDTARCPGRSEVRGSTKPSL*MTHTRD
Trigger: GTCTCTTGTGTGTGTCATGCACAAGGAAGGCTTGGT...TGATCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR GCA 90 bp GGGAGGGAAATGAAGACCTTAGCCGTGGGTAGAGTCCTCAAGGCCTTGCCTGTGAGGCCCTCAAACCCCTaGAGCCTGACCTATACCATA +
Preference number: 4 (lower is better)
Translates to: GREMKTLAVGRVLKALPVRPSNP*SLTYTI
Trigger: TATGGTATAGGTCAGGCTGCAGGGGTTTGAGGGCCT...CACAGGCAAGGCCTTGAGGACTCTACCCACGGCTAAGGTCTTCATTTCCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR GCA 90 bp AAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTGTCACTCGAGGCTCTaGCCTAAATGTCCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: KREMIRSLWRKGLLRETSCHSRL*PKCPQG
Trigger: GCCTTGGGGACATTTAGGGCAGAGCCTCGAGTGACA...GCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR GCA 90 bp TCCCTAGCTTCATATCCCCCAGGCCCCTGCGCCTCTGGAATGTACCAACAAGGGTCCTGTTTCTTGGGCTaGTTGTCTCCTGCACATAGG +
Preference number: 4 (lower is better)
Translates to: SLASYPPGPCASGMYQQGSCFLG*LSPAHR
Trigger: CCTATGTGCAGGAGACAAGCAGCCCAAGAAACAGGA...CCCTTGTTGGTACATTCCAGAGGCGCAGGGGCCTGGGGGATATGAAGCTAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR GCA 90 bp GGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCTACCAGGAGCCGGATaGCCACATATTGAGGCACCT +
Preference number: 4 (lower is better)
Translates to: GDDQKSVEEGASEGDQLFLPGAG*PHIEAP
Trigger: AGGTGCCTCAATATGTGGGCATCCGGCTCCTGGTAG...GAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GGAAGCCCCATGTCTGTCCTTAGGTGGGAATTCTGGGCCTCGCTGCACGGAGGATTCATCCACAAACTCTaGGGACACCAACACTGGGTT +
Preference number: 4 (lower is better)
Translates to: GSPMSVLRWEFWASLHGGFIHKL*GHQHWV
Trigger: AACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAA...TCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGACATGGGGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp AGCTGGCCTTCCGACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGATCATTCATCCACAAACTCTaGGGACACCAACACTGGGTT +
Preference number: 4 (lower is better)
Translates to: SWPSDTARCPGRSEVRGSFIHKL*GHQHWV
Trigger: AACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAA...TGATCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CAAAGCTGGCCTTCCGACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGATTGTCGATGTCCATGTaGGCCAAGTTGCTAAGGTAC +
Preference number: 4 (lower is better)
Translates to: QSWPSDTARCPGRSEVRGLSMSM*AKLLRY
Trigger: GTACCTTAGCAACTTGGCCCACATGGACATCGACAA...TCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAGCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
CDS-3UTR CCA 90 bp AGCAGGCTGCTTATAGATGAGCTCAAAGGCTCCTGTGTCACAGTTGCGGTCCAGCCTTCCATGTCTATCTaGGGTACCACGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SRLLIDELKGSCVTVAVQPSMSI*GTTACS
Trigger: GCTGCAGGCCGTGGTACCCCAGATAGACATGGAAGG...CTGGACCGCAACTGTGACACAGGAGCCTTTGAGCTCATCTATAAGCAGCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR CCA 90 bp CAGGTTCTTCAGGGAGAAGGGCTGCGTGGAAAAGCGGATATAGCTGTCGCGGTAGCGGGACTTGGCTCCTaGCTTCACGATCCAGATGTT +
Preference number: 4 (lower is better)
Translates to: QVLQGEGLRGKADIAVAVAGLGS*LHDPDV
Trigger: AACATCTGGATCGTGAAGCCAGGAGCCAAGTCCCGC...TACCGCGACAGCTATATCCGCTTTTCCACGCAGCCCTTCTCCCTGAAGAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430390.5
CDS-3UTR CCA 90 bp CTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGGCAAACCTCGTCCGCGGGACTTaGCTCCTGGCTTCACGATCC +
Preference number: 4 (lower is better)
Translates to: LREQLAPFVFCLLLSQANLVRGT*LLASRS
Trigger: GGATCGTGAAGCCAGGAGCCAAGTCCCGCGGACGAG...GTTTGCCTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CCA 90 bp TTGCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGCTCGTCCGCGGGACTTaGCTCCTGGCTTCACGATCC +
Preference number: 4 (lower is better)
Translates to: LPLALTFRQVLGIVPTSKLVRGT*LLASRS
Trigger: GGATCGTGAAGCCAGGAGCCAAGTCCCGCGGACGAG...CTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGCATGAGTTCTCCAGGTGCTGGGCCTGGAACCTCTaGCTAGACCACATGTTGTCT +
Preference number: 4 (lower is better)
Translates to: HMLSGGSSGCRWHEFSRCWAWNL*LDHMLS
Trigger: AGACAACATGTGGTCTAGCCAGAGGTTCCAGGCCCA...GCACCTGGAGAACTCATGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CAGTTGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTGGACCCATCTCCTGCAGGTaGGCCTGGAACCTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: QLPFSTTSTVLESVLSLGPISCR*AWNLWL
Trigger: TAGCCAGAGGTTCCAGGCCCACCTGCAGGAGATGGG...TCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CCA 90 bp TGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCGTGGGGGTGGACCAAGCATTTaGGGCACCCATCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: CHLEIKVRWEGNEDLSRGGGPSI*GTHLLQ
Trigger: CTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACC...CCCACGGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TGGATCACAGCATCCTTCATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGGGTGGACCAAGCATTTaGGGCACCCATCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: WITASFMPGTMMVDQAFGGGPSI*GTHLLQ
Trigger: CTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACC...CCCAAATGCTTGGTCCACCATCATCGTGCCTGGCATGAAGGATGCTGTGATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGGGTGGACCAAGCATTTaGGGCACCCATCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: AFGLDLPTGARNCSDFKGGGPSI*GTHLLQ
Trigger: CTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACC...CCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TATTTGGTGTTGGATCCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCCATAGAGCTCAAAGCTaGCCTTCCGACACTGCACGG +
Preference number: 4 (lower is better)
Translates to: YLVLDPGQGQWGIEAGASHRAQS*PSDTAR
Trigger: CCGTGCAGTGTCGGAAGGCCAGCTTTGAGCTCTATG...GGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAACACCAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTAAGGCAGCTGGGCCTTaGTGTGGAGGCTGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: RQVLGIVPTSKGRGNKALKAAGP*CGGWGS
Trigger: ACTTCCCCAGCCTCCACACCAAGGCCCAGCTGCCTT...AAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CGCACACAGAGCTTCATCCACAAACTCTGGGGACACCAACACTGGGTTTTTCTCAAGGCAGCTGGGCCTTaGTGTGGAGGCTGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: RTQSFIHKLWGHQHWVFLKAAGP*CGGWGS
Trigger: ACTTCCCCAGCCTCCACACCAAGGCCCAGCTGCCTT...GAGAAAAACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAAGCTCTGTGTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR CCA 90 bp GTTCAACCCACTACAACTAAGCAGTGCCACACTTTTCTTCAGGTGGGTGTGGCTTGGGGAGAAGGCAGCTaGGCCTTGGTGTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VQPTTTKQCHTFLQVGVAWGEGS*ALVWRL
Trigger: CAGCCTCCACACCAAGGCCCAGCTGCCTTCTCCCCA...AGCCACACCCACCTGAAGAAAAGTGTGGCACTGCTTAGTTGTAGTGGGTTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp ATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTTGTCGTCTGAGGACCTaGCCCTGGTGTCGGAGTACA +
Preference number: 4 (lower is better)
Translates to: MIRSLWRKGLLRETSSSLCRLRT*PWCRST
Trigger: TGTACTCCGACACCAGGGCCAGGTCCTCAGACGACA...AAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp ACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCTCCTGTTTCAGGCTaGTCACGGTGGCTGACGCCT +
Preference number: 4 (lower is better)
Translates to: TFRQVLGIVPTSKGRGNKAPVSG*SRWLTP
Trigger: AGGCGTCAGCCACCGTGACCAGCCTGAAACAGGAGC...CTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGCCTGGGACAGAAGAATaGATGAGTGGATGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: LFRLQRAEATRHFQLGASPGTEE*MSGWPE
Trigger: TTCAGGCCATCCACTCATCCATTCTTCTGTCCCAGG...CGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR CCA 90 bp AGCAGGCTGCTTATAGATGAGCTCAAAGGCTCCTGTGTCACAGTTGCGGTCCAGGAGGCCCACCTTTCTTaGCTTCAGGATGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: SRLLIDELKGSCVTVAVQEAHLS*LQDAGC
Trigger: GCACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTC...CTGGACCGCAACTGTGACACAGGAGCCTTTGAGCTCATCTATAAGCAGCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR CCA 90 bp GGTGGGTGTGGCTTATTGGATGTTTCATTTTTAGGTGACCTTGGCCCCTTGCTGGGCAGGCCTCAGCCCTaGGTTTGTCACAGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: GGCGLLDVSFLGDLGPLLGRPQP*VCHSLA
Trigger: GGCCAGACTGTGACAAACCCAGGGCTGAGGCCTGCC...CAGCAAGGGGCCAAGGTCACCTAAAAATGAAACATCCAATAAGCCACACCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp TTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTTGTTCTCTGGGGCAGGCCTCAGCCCTaGGTTTGTCACAGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LTFLCPVGVILLAWLVLWGRPQP*VCHSLA
Trigger: GGCCAGACTGTGACAAACCCAGGGCTGAGGCCTGCC...CCAGAGAACAAGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp CGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTAGGCCCCTGCGCCTCTaGAATGTACCAACAAGGGGC +
Preference number: 4 (lower is better)
Translates to: RQVLGIVPTSKGRGNKALRPLRL*NVPTRG
Trigger: GCCCCTTGTTGGTACATTCCAGAGGCGCAGGGGCCT...AAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCCTTTTTATTTGGTGTTaGATCCAGGACAAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: LWRKGLLRETSSSLGVPALFIWC*IQDKGS
Trigger: ACTGCCCTTGTCCTGGATCCAACACCAAATAAAAAG...GGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TCTGTCCTTAGGTGGGAATTCTGGGCCTCGCTGCACGGAGGAGCTGCTGATGGCACCCTCCAACAGCAATaGAGTCAAGCCCCAAATACT +
Preference number: 4 (lower is better)
Translates to: SVLRWEFWASLHGGAADGTLQQQ*SQAPNT
Trigger: AGTATTTGGGGCTTGACTCCATTGCTGTTGGAGGGT...GCCATCAGCAGCTCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp TCAGAGCGCAGTGGCGTGATCACAGCTCACCACAGTTTTGATCTTCCCAGGCTCTCATGTGAGACGCCTTaGAGGATCCTCGCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: SERSGVITAHHSFDLPRLSCETP*RILARG
Trigger: TCCTCTGGCGAGGATCCTCCAAGGCGTCTCACATGA...GAGCCTGGGAAGATCAAAACTGTGGTGAGCTGTGATCACGCCACTGCGCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR CCA 90 bp TGGCTAGACCACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGCATGAGTTCTCATGTGAGACGCCTTaGAGGATCCTCGCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: WLDHMLSGGSSGCRWHEFSCETP*RILARG
Trigger: TCCTCTGGCGAGGATCCTCCAAGGCGTCTCACATGA...GAACTCATGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000431204.5
CDS-3UTR CCA 90 bp AGTGCTCGGCAGTTCTGGCAATATGTCCCTGCGTCGACTCACTGCCACGTGATCCATCCTCATCCTCAGTaGTGTCACTGTCACCCATCG +
Preference number: 4 (lower is better)
Translates to: SARQFWQYVPASTHCHVIHPHPQ*CHCHPS
Trigger: CGATGGGTGACAGTGACACCACTGAGGATGAGGATG...GATCACGTGGCAGTGAGTCGACGCAGGGACATATTGCCAGAACTGCCGAGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR CCA 90 bp CCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCCTAGCTTCATATCCCAACAGCTGTGATGGCTaGAACTCCTCGTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: PGQGQWGIEAGASLASYPNSCDG*NSSSSS
Trigger: AGATGAGGACGAGGAGTTCCAGCCATCACAGCTGTT...GGGATATGAAGCTAGGGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000430390.5
CDS-3UTR TCA 90 bp TTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAACTTCACCACCAGCTTaGGAACGTTGCGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LALTFRQVLGIVPTSKGRTSPPA*ERCGQQ
Trigger: CTGCTGCCCGCAACGTTCTCAAGCTGGTGGTGAAGT...TCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GGGCTGAGGTTTAGGCAAGGCCAATTCCTTCCCCTGTCTCATGGCATTAACGTTACTTCACCACCAGCTTaGGAACGTTGCGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GLRFRQGQFLPLSHGINVTSPPA*ERCGQQ
Trigger: CTGCTGCCCGCAACGTTCTCAAGCTGGTGGTGAAGT...AACGTTAATGCCATGAGACAGGGGAAGGAATTGGCCTTGCCTAAACCTCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR TCA 90 bp CTTGAATTTGCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACGAGTGTCGAGGTGCCTaGGTTCTGCCCCTTCGTGGA +
Preference number: 4 (lower is better)
Translates to: LEFAFGLDLPTGARNCSDECRGA*VLPLRG
Trigger: TCCACGAAGGGGCAGAACTCAGGCACCTCGACACTC...GTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAAATTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR TCA 90 bp TTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTTGTTCTCTGGTCACAGCGCTGGACCTaGGTGTCGAGGTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: LTFLCPVGVILLAWLVLWSQRWT*VSRCLS
Trigger: ACTCAGGCACCTCGACACTCAGGTCCAGCGCTGTGA...CCAGAGAACAAGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR TCA 90 bp GGCCAATTCCTTCCCCTGTCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTTGGATGCCGATGGCATaGGTTCTCCAGGTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: GQFLPLSHGINVPMPGRCWMPMA*VLQVLL
Trigger: CAGAAGCACCTGGAGAACTCATGCCATCGGCATCCA...ACACCTACCGGGCATAGGAACGTTAATGCCATGAGACAGGGGAAGGAATTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR TCA 90 bp CACAGGAGAGCAGGAGCCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAATCATGCCAGGCACGATaGTGGTGGACCAAGCATTTG +
Preference number: 4 (lower is better)
Translates to: HRRAGAFLGFRMLGATLKSCQAR*WWTKHL
Trigger: CAAATGCTTGGTCCACCATCATCGTGCCTGGCATGA...TTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGCTCCTGCTCTCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000438141.5
CDS-3UTR TCA 90 bp GAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGTCATGCCAGGCACGATaGTGGTGGACCAAGCATTTG +
Preference number: 4 (lower is better)
Translates to: EEGDDQKSVEEGASEGDQSCQAR*WWTKHL
Trigger: CAAATGCTTGGTCCACCATCATCGTGCCTGGCATGA...CTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp TGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTGGACTTCGTGTCCTGGGAGGTCTaGAGTGCGTGGATCACAGCA +
Preference number: 4 (lower is better)
Translates to: CLSAQPPLFWRVCLALDFVSWEV*SAWITA
Trigger: TGCTGTGATCCACGCACTTCAGACCTCCCAGGACAC...GAAGTCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR TCA 90 bp TATTTGGTGTTGGATCCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCCGGGCTGCTTATAGATaGGCTCAAAGGCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: YLVLDPGQGQWGIEAGASRAAYR*AQRLLC
Trigger: ACACAGGAGCCTTTGAGCTCATCTATAAGCAGCCCG...GGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAACACCAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
CDS-3UTR TCA 90 bp AAGGTACTCCTCGCACGCACACAGAGCTTCATCCACAAACTCTGGGGACACCAAAGCACTTTGGGAGGCTaGGGTGGATGGATCATGAGG +
Preference number: 4 (lower is better)
Translates to: KVLLARTQSFIHKLWGHQSTLGG*GGWIMR
Trigger: CCTCATGATCCATCCACCTCAGCCTCCCAAAGTGCT...TTGGTGTCCCCAGAGTTTGTGGATGAAGCTCTGTGTGCGTGCGAGGAGTACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000496246.5
CDS-3UTR TCA 90 bp GAGCTCAAAGGCTCCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACAGATCAGAGAGTGGGTaGATACGTGGGTGGATGAGT +
Preference number: 4 (lower is better)
Translates to: ELKGSCVTVAVQHPVNDHRSESG*IRGWMS
Trigger: ACTCATCCACCCACGTATTCACCCACTCTCTGATCT...GTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCCTTTGAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR TCA 90 bp GCTGGGTGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCGGAAGGGTGGGTGGGTaGATCGGTAGATCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: AGCHLEIKVRWEGNEDLSGRVGG*IGRSES
Trigger: ACTCTCTGATCTACCGATTCACCCACCCACCCTTCC...GCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GTCCTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCATGCCAGGCACGATCCACTCCCAGAATCCTaGTACAGAGCTACAACCCTT +
Preference number: 4 (lower is better)
Translates to: VLGGLKCVDHSILHARHDPLPES*YRATTL
Trigger: AAGGGTTGTAGCTCTGTATCAGGATTCTGGGAGTGG...ATCGTGCCTGGCATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR TCA 90 bp CTGGGTGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCGAACCCAGTTATACATaGACGCCCCTCCCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: LGATLKSRFGGREMKTLAEPSYT*TPLPQV
Trigger: GACTTGGGGGAGGGGCGTTCATGTATAACTGGGTTC...GGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR TCA 90 bp CAGTTCCTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGTCAAGGCAGGTAACCTaGCGCATGCCACAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: QFLREQLAPFVFCLLLSQSRQVT*RMPQPP
Trigger: TGGGGGCTGTGGCATGCGTCAGGTTACCTGCCTTGA...CTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAGGAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR TCA 90 bp GAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGGGGAGAAGAGGGAGATaGTCAGAAGTCTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: EEGDDQKSVEEGASEGDQGRRGR*SEVCGG
Trigger: TCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCC...CTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTGGGAGAAGAGGGAGATaGTCAGAAGTCTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: DDQKSVEEGASEGDQLFPGRRGR*SEVCGG
Trigger: TCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCC...AGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GGCCAATTCCTTCCCCTGTCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTACCTTGGCCCCTTGCTaGAGAAGGGATAGACCCATG +
Preference number: 4 (lower is better)
Translates to: GQFLPLSHGINVPMPGRCTLAPC*RRDRPM
Trigger: CATGGGTCTATCCCTTCTTCAGCAAGGGGCCAAGGT...ACACCTACCGGGCATAGGAACGTTAATGCCATGAGACAGGGGAAGGAATTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR TCA 90 bp CGGTGTCCTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCATGCCAGGCAAGATCTTCTTCTGCTTaGCAGCTCTCTCCACGTAGA +
Preference number: 4 (lower is better)
Translates to: RCPGRSEVRGSQHPSCQARSSSA*QLSPRR
Trigger: TCTACGTGGAGAGAGCTGTCAAGCAGAAGAAGATCT...TGCCTGGCATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGACACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
CDS-3UTR TCA 90 bp AATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTACTGTCACCCATCGCTaGGCTATCCAGATCCTTCTG +
Preference number: 4 (lower is better)
Translates to: NCSDFKGQRQQGTSSWGPTVTHR*AIQILL
Trigger: CAGAAGGATCTGGATAGCTCAGCGATGGGTGACAGT...AGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000430390.5
CDS-3UTR TCA 90 bp TCCTTCATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACCCATCTCCTCCTGGCTAACACAGTaGAACCCCGTCTCTATGAAG +
Preference number: 4 (lower is better)
Translates to: SFMPGTMMVDQAFGAPISSWLTQ*NPVSMK
Trigger: CTTCATAGAGACGGGGTTTCACTGTGTTAGCCAGGA...GGAGATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCATGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR TCA 90 bp AGTGCTCGGCAGTTCTGGCAATATGTCCCTGCGTCGACTCACTGCCACGTGATCCAGGCTGCTTATAGATaGGCTCAAAGGCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: SARQFWQYVPASTHCHVIQAAYR*AQRLLC
Trigger: ACACAGGAGCCTTTGAGCTCATCTATAAGCAGCCTG...GATCACGTGGCAGTGAGTCGACGCAGGGACATATTGCCAGAACTGCCGAGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR GCA 90 bp TTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGGCAAACTACGGCCTGCAGCTGCTaGAGGATGTCCTCACAGCGC +
Preference number: 4 (lower is better)
Translates to: FGSNSHLLFSVCCFLRQTTACSC*RMSSQR
Trigger: GCGCTGTGAGGACATCCTGCAGCAGCTGCAGGCCGT...AGTTTGCCTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR GCA 90 bp ATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACCCATCTCCTGCAGGTCACGATCCAGATGTTaGGATCCCCTTCCATGTCTA +
Preference number: 4 (lower is better)
Translates to: MPGTMMVDQAFGAPISCRSRSRC*DPLPCL
Trigger: TAGACATGGAAGGGGATCGCAACATCTGGATCGTGA...CCTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CTGGGTGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCTCATCACCACGGGGTTaGCGTTCACCAGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LGATLKSRFGGREMKTLASSPRG*RSPASA
Trigger: TGCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGA...GGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp TTGTCTGGCGGAAGCAGTGGATGCCGATGGCATGAGTTCTCCAGGTGCTTCTGGGAGTTGTTGCACAGGTaGACTGAGTTGTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LSGGSSGCRWHEFSRCFWELLHR*TELSRF
Trigger: GAACCTGGACAACTCAGTGCACCTGTGCAACAACTC...CCAGAAGCACCTGGAGAACTCATGCCATCGGCATCCACTGCTTCCGCCAGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCCTAGCTTCATATCCCTCTGGATGGAGTTGTTaGACAGGTGCACTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: PGQGQWGIEAGASLASYPSGWSC*TGALSC
Trigger: ACAACTCAGTGCACCTGTGCAACAACTCCATCCAGA...GGGATATGAAGCTAGGGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR GCA 90 bp AGTGCGTGGATCACAGCATCCTTCATGCCAGGCACGATGATGGTGGACCAAGCACTGGGAGGTCTGAAGTaGGTGGATCACAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: SAWITASFMPGTMMVDQALGGLK*VDHSIL
Trigger: AAGGATGCTGTGATCCACGCACTTCAGACCTCCCAG...TGCTTGGTCCACCATCATCGTGCCTGGCATGAAGGATGCTGTGATCCACGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR GCA 90 bp TTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGGCAAACTGAGCCGGGCAGTGACTaGTGTGGAGGGTGCCATCGT +
Preference number: 4 (lower is better)
Translates to: FGSNSHLLFSVCCFLRQTEPGSD*CGGCHR
Trigger: ACGATGGCACCCTCCACAGCAGTCACTGCCCGGCTC...AGTTTGCCTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR GCA 90 bp TGGACCCTGGGGTACACGGCCTCGCCCCATCCACTCTTGACCCTCCAACAGCAAAACCTGATCATGACTTaGCCCATTTTGGATCCAGAA +
Preference number: 4 (lower is better)
Translates to: WTLGYTASPHPLLTLQQQNLIMT*PILDPE
Trigger: TTCTGGATCCAAAATGGGGCAAGTCATGATCAGGTT...TTGCTGTTGGAGGGTCAAGAGTGGATGGGGCGAGGCCGTGTACCCCAGGGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR GCA 90 bp CAGTTGCGGTCCAGCATCCGGTCAATGACCACGCGCAGGGTGTCAGCTTGCACGAACCTGATCATGACTTaGCCCATTTTGGATCCAGAA +
Preference number: 4 (lower is better)
Translates to: QLRSSIRSMTTRRVSACTNLIMT*PILDPE
Trigger: TTCTGGATCCAAAATGGGGCAAGTCATGATCAGGTT...CGTGCAAGCTGACACCCTGCGCGTGGTCATTGACCGGATGCTGGACCGCAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CTAGGCTTGAGGCCTGTTCTGGTTCCAGAACCTGATCATGACTTGCCCCATTTTCAGCCAGAAGTCCTCTaGTCCCAGGCCAGGGGATAC +
Preference number: 4 (lower is better)
Translates to: LGLRPVLVPEPDHDLPHFQPEVL*SQARGY
Trigger: GTATCCCCTGGCCTGGGAGCAGAGGACTTCTGGCTG...AAAATGGGGCAAGTCATGATCAGGTTCTGGAACCAGAACAGGCCTCAAGCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
CDS-3UTR GCA 90 bp ATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGGTTGGGTTGGCATaGATGATAGTGAGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: IRSLWRKGLLRETSSSLGVVGLA*MIVRVP
Trigger: AGGAACCCTCACTATCATGCATGCCAACCCAACCAC...CCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CAGTTCCTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGCACCCGAGGCCCTTGTaGCCCTTATCCTGGCACACA +
Preference number: 4 (lower is better)
Translates to: QFLREQLAPFVFCLLLSQHPRPL*PLSWHT
Trigger: TGTGTGCCAGGATAAGGGGCACAAGGGCCTCGGGTG...CTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAGGAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR GCA 90 bp GCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAGGCTCTGCCTAAAATaGACCTGGGAGTCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: ALTFRQVLGIVPTSKGRGRLCLK*TWESWP
Trigger: AGGCCAAGACTCCCAGGTGCATTTTAGGCAGAGCCT...GCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGTGCAACTCTAGCACTTaGCCTTGGCTCCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: AFGLDLPTGARNCSDFKGCNSST*PWLPLS
Trigger: GGACAGTGGGAGCCAAGGGCAAGTGCTAGAGTTGCA...CCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp AGCCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAATCAAGGTTCGGTGGTGCAACTCTAGCACTTaGCCTTGGCTCCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: SLSWLQDAGCHLEIKVRWCNSST*PWLPLS
Trigger: GGACAGTGGGAGCCAAGGGCAAGTGCTAGAGTTGCA...CCACCGAACCTTGATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438141.5
CDS-3UTR GCA 90 bp GTTCAACCCACTACAACTAAGCAGTGCCACACTTTTCTTCAGGTGGGTGTGGCTGAGTCCTCAAGGCCTTaGCTGTGGTCGACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: VQPTTTKQCHTFLQVGVAESSRP*LWSTGP
Trigger: AGGCCCTGTCGACCACAGGCAAGGCCTTGAGGACTC...AGCCACACCCACCTGAAGAAAAGTGTGGCACTGCTTAGTTGTAGTGGGTTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR GCA 90 bp ACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCTATCCCCCAGGCCCCTaGGCCTCTGGAATGTACCAA +
Preference number: 4 (lower is better)
Translates to: TGARNCSDFKGQRQQGTSYPPGP*ASGMYQ
Trigger: TTGGTACATTCCAGAGGCGCAGGGGCCTGGGGGATA...GGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp AGTTTCTTCATCTGTAAAGTGAAGGCTCACGCTCCCCACCCCTGGATCGGAGATAATTCTGGGCCTCGCTaGACGGAGGAGCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: SFFICKVKAHAPHPWIGDNSGPR*TEELLM
Trigger: CATCAGCAGCTCCTCCGTGCAGCGAGGCCCAGAATT...ATCTCCGATCCAGGGGTGGGGAGCGTGAGCCTTCACTTTACAGATGAAGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR GCA 90 bp GGCCAATTCCTTCCCCTGTCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTCTACCAGGAGCCGGATaGCCACATATTGAGGCACCT +
Preference number: 4 (lower is better)
Translates to: GQFLPLSHGINVPMPGRCLPGAG*PHIEAP
Trigger: AGGTGCCTCAATATGTGGGCATCCGGCTCCTGGTAG...ACACCTACCGGGCATAGGAACGTTAATGCCATGAGACAGGGGAAGGAATTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR CCA 90 bp GGAAGCCCCATGTCTGTCCTTAGGTGGGAATTCTGGGCCTCGCTGCACGGAGGATGGGGACACCAACACTaGGTTTTTCTCCTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: GSPMSVLRWEFWASLHGGWGHQH*VFLLFL
Trigger: AAGAAACAGGAGAAAAACCCAGTGTTGGTGTCCCCA...TCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGACATGGGGCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp CAGTTGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTGGACCTTCCATGTCTATCTaGGGTACCACGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QLPFSTTSTVLESVLSLGPSMSI*GTTACS
Trigger: GCTGCAGGCCGTGGTACCCCAGATAGACATGGAAGG...TCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CCA 90 bp CCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCGCGGGACTTGGCTCCTaGCTTCACGATCCAGATGTT +
Preference number: 4 (lower is better)
Translates to: PLALTFRQVLGIVPTSKGAGLGS*LHDPDV
Trigger: AACATCTGGATCGTGAAGCCAGGAGCCAAGTCCCGC...GCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp ACCACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGCATGAGTTCTCCAGGTAGCATCTCCTCCAGGTaGTCCATGCACATGATGCCT +
Preference number: 4 (lower is better)
Translates to: TTCCLAEAVDADGMSSPGSISSR*SMHMMP
Trigger: AGGCATCATGTGCATGGACCACCTGGAGGAGATGCT...ACCTGGAGAACTCATGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CCA 90 bp AGGGGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAAGCATCTCCTCCAGGTaGTCCATGCACATGATGCCT +
Preference number: 4 (lower is better)
Translates to: RGEEGDDQKSVEEGASEGSISSR*SMHMMP
Trigger: AGGCATCATGTGCATGGACCACCTGGAGGAGATGCT...TCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGAGCATCTCCTCCAGGTaGTCCATGCACATGATGCCT +
Preference number: 4 (lower is better)
Translates to: EEGDDQKSVEEGASEGDQSISSR*SMHMMP
Trigger: AGGCATCATGTGCATGGACCACCTGGAGGAGATGCT...CTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GAAGGGCTGCGTGGAAAAGCGGATATAGCTGTCGCGGTAGAACCACACGGTAAGGGGAGAAGGGCTGCGTaGAAAAGCGGATATAGCTGT +
Preference number: 4 (lower is better)
Translates to: EGLRGKADIAVAVEPHGKGRRAA*KSGYSC
Trigger: ACAGCTATATCCGCTTTTCCACGCAGCCCTTCTCCC...CTTACCGTGTGGTTCTACCGCGACAGCTATATCCGCTTTTCCACGCAGCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000431204.5
CDS-3UTR CCA 90 bp CACAGGAGAGCAGGAGCCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAAGGGAGAAGGGCTGCGTaGAAAAGCGGATATAGCTGT +
Preference number: 4 (lower is better)
Translates to: HRRAGAFLGFRMLGATLKGRRAA*KSGYSC
Trigger: ACAGCTATATCCGCTTTTCCACGCAGCCCTTCTCCC...TTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGCTCCTGCTCTCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000438141.5
CDS-3UTR CCA 90 bp GCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGAGACCACATGTTGTCTaGCGGAAGCAGTGGATGCCG +
Preference number: 4 (lower is better)
Translates to: AFGLDLPTGARNCSDFKGRPHVV*RKQWMP
Trigger: CGGCATCCACTGCTTCCGCCAGACAACATGTGGTCT...CCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCATGCCAGGCACGATGATTGGGCCTGGAACCTCTaGCTAGACCACATGTTGTCT +
Preference number: 4 (lower is better)
Translates to: LGGLKCVDHSILHARHDDWAWNL*LDHMLS
Trigger: AGACAACATGTGGTCTAGCCAGAGGTTCCAGGCCCA...ATCATCGTGCCTGGCATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTTCCTGCAGGTGGGCCTaGAACCTCTGGCTAGACCAC +
Preference number: 4 (lower is better)
Translates to: SHGINVPMPGRCHSASLASCRWA*NLWLDH
Trigger: GTGGTCTAGCCAGAGGTTCCAGGCCCACCTGCAGGA...AGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAATGCCATGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp TTGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTGGACTTTCCTGCAGGTGGGCCTaGAACCTCTGGCTAGACCAC +
Preference number: 4 (lower is better)
Translates to: LPFSTTSTVLESVLSLGLSCRWA*NLWLDH
Trigger: GTGGTCTAGCCAGAGGTTCCAGGCCCACCTGCAGGA...AAGTCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CCA 90 bp TCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTCCCATCTCCTGCAGGTaGGCCTGGAACCTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: SHGINVPMPGRCHSASLAPISCR*AWNLWL
Trigger: TAGCCAGAGGTTCCAGGCCCACCTGCAGGAGATGGG...AGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAATGCCATGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp GCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCATAGAGCTCAAAGCTaGCCTTCCGACACTGCACGG +
Preference number: 4 (lower is better)
Translates to: AFGLDLPTGARNCSDFKGHRAQS*PSDTAR
Trigger: CCGTGCAGTGTCGGAAGGCCAGCTTTGAGCTCTATG...CCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp AGTTTCTTCATCTGTAAAGTGAAGGCTCACGCTCCCCACCCCTGGATCGGAGATTCAATCAGCCAGGGCTaGAAGTCCTCCCCGAACACG +
Preference number: 4 (lower is better)
Translates to: SFFICKVKAHAPHPWIGDSISQG*KSSPNT
Trigger: CGTGTTCGGGGAGGACTTCCAGCCCTGGCTGATTGA...ATCTCCGATCCAGGGGTGGGGAGCGTGAGCCTTCACTTTACAGATGAAGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp TTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACTCAATCAGCCAGGGCTaGAAGTCCTCCCCGAACACG +
Preference number: 4 (lower is better)
Translates to: LTFRQVLGIVPTSKGRGNSISQG*KSSPNT
Trigger: CGTGTTCGGGGAGGACTTCCAGCCCTGGCTGATTGA...GTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GTTCAACCCACTACAACTAAGCAGTGCCACACTTTTCTTCAGGTGGGTGTGGCTAAGGCAGCTGGGCCTTaGTGTGGAGGCTGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: VQPTTTKQCHTFLQVGVAKAAGP*CGGWGS
Trigger: ACTTCCCCAGCCTCCACACCAAGGCCCAGCTGCCTT...AGCCACACCCACCTGAAGAAAAGTGTGGCACTGCTTAGTTGTAGTGGGTTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp TTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCGTGGGTAGAGTCAAGGCAGCTGGGCCTTaGTGTGGAGGCTGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LKSRFGGREMKTLAVGRVKAAGP*CGGWGS
Trigger: ACTTCCCCAGCCTCCACACCAAGGCCCAGCTGCCTT...GACTCTACCCACGGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp ACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGTGTCGTCTGAGGACCTaGCCCTGGTGTCGGAGTACA +
Preference number: 4 (lower is better)
Translates to: TFRQVLGIVPTSKGRGNKCRLRT*PWCRST
Trigger: TGTACTCCGACACCAGGGCCAGGTCCTCAGACGACA...CTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TACCCTGCTCAGCCCCTAGGCTTGAGGCCTGTTCTGGTTCCAGAACCTGATCATTTTGGGAGGCTGAGGTaGATGGATCATGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: YPAQPLGLRPVLVPEPDHFGRLR*MDHEVR
Trigger: CCTGACCTCATGATCCATCCACCTCAGCCTCCCAAA...ATGATCAGGTTCTGGAACCAGAACAGGCCTCAAGCCTAGGGGCTGAGCAGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
CDS-3UTR CCA 90 bp ATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGTGGAGGATAAATGGGTaGGAGAGTGGAGGTAACCAC +
Preference number: 4 (lower is better)
Translates to: IRSLWRKGLLRETSSSLGWRING*ESGGNH
Trigger: GTGGTTACCTCCACTCTCCCACCCATTTATCCTCCA...CCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCAGGGAGTGGATAGATaGATGGGGAGTATGGAGCTG +
Preference number: 4 (lower is better)
Translates to: EEGDDQKSVEEGASEGDQQGVDR*MGSMEL
Trigger: CAGCTCCATACTCCCCATCCATCTATCCACTCCCTG...CTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR CCA 90 bp ACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCACAGAATGGATGAGTGGATaGCCTGAAGAACAGATAGGT +
Preference number: 4 (lower is better)
Translates to: TSKGRGNKALPAGGLGGTEWMSG*PEEQIG
Trigger: ACCTATCTGTTCTTCAGGCCATCCACTCATCCATTC...TGTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CAGTTGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTGGATCTAGCACTTGCCCTTaGCTCCCACTGTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: QLPFSTTSTVLESVLSLGSSTCP*LPLSQD
Trigger: GTCCTGGGACAGTGGGAGCCAAGGGCAAGTGCTAGA...TCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CCA 90 bp TTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTTGTTCTCTGGAGGCCCCTGCGCCTCTaGAATGTACCAACAAGGGGC +
Preference number: 4 (lower is better)
Translates to: LTFLCPVGVILLAWLVLWRPLRL*NVPTRG
Trigger: GCCCCTTGTTGGTACATTCCAGAGGCGCAGGGGCCT...CCAGAGAACAAGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp TGGACCCTGGGGTACACGGCCTCGCCCCATCCACTCTTGACCCTCCAACAGCAAACACTTTTCTTCAGGTaGGTGTGGCTTATTGGATGT +
Preference number: 4 (lower is better)
Translates to: WTLGYTASPHPLLTLQQQTLFFR*VWLIGC
Trigger: ACATCCAATAAGCCACACCCACCTGAAGAAAAGTGT...TTGCTGTTGGAGGGTCAAGAGTGGATGGGGCGAGGCCGTGTACCCCAGGGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR CCA 90 bp CGCACACAGAGCTTCATCCACAAACTCTGGGGACACCAACACTGGGTTTTTCTCGTGGGGCCTGAGCGATaGACCATCTTCTTCTCCACC +
Preference number: 4 (lower is better)
Translates to: RTQSFIHKLWGHQHWVFLVGPER*TIFFST
Trigger: GGTGGAGAAGAAGATGGTCCATCGCTCAGGCCCCAC...GAGAAAAACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAAGCTCTGTGTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR CCA 90 bp GCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCCATCCTCATCCTCAGTaGTGTCACTGTCACCCATCG +
Preference number: 4 (lower is better)
Translates to: ALTFRQVLGIVPTSKGRGHPHPQ*CHCHPS
Trigger: CGATGGGTGACAGTGACACCACTGAGGATGAGGATG...GCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000430390.5
CDS-3UTR CCA 90 bp AGTGCGTGGATCACAGCATCCTTCATGCCAGGCACGATGATGGTGGACCAAGCACATCCTCATCCTCAGTaGTGTCACTGTCACCCATCG +
Preference number: 4 (lower is better)
Translates to: SAWITASFMPGTMMVDQAHPHPQ*CHCHPS
Trigger: CGATGGGTGACAGTGACACCACTGAGGATGAGGATG...TGCTTGGTCCACCATCATCGTGCCTGGCATGAAGGATGCTGTGATCCACGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
CDS-3UTR CCA 90 bp TGGAACCTCTGGCTAGACCACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGAACAGCTGTGATGGCTaGAACTCCTCGTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: WNLWLDHMLSGGSSGCRWNSCDG*NSSSSS
Trigger: AGATGAGGACGAGGAGTTCCAGCCATCACAGCTGTT...CCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCAGAGGTTCCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
CDS-3UTR CCA 90 bp GGTGGGTGTGGCTTATTGGATGTTTCATTTTTAGGTGACCTTGGCCCCTTGCTGCCTTGGTGTGGAGGCTaGGGAAGTGGTGACGGGCTT +
Preference number: 4 (lower is better)
Translates to: GGCGLLDVSFLGDLGPLLPWCGG*GSGDGL
Trigger: AAGCCCGTCACCACTTCCCCAGCCTCCACACCAAGG...CAGCAAGGGGCCAAGGTCACCTAAAAATGAAACATCCAATAAGCCACACCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426895.9
3UTR CAA 72 bp ATAGGGTATGACTTCCACTCAGACTTCACCACCAGCTaGAGAACGTTGCGGGCAGCAGTCAGCCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: IGYDFHSDFTTS*RTLRAAVSQKS
Trigger: GGACTTCTGGCTGACTGCTGCCCGCAACGTTCTCAAGCTGGTGGTGAAGTCTGAGTGGAAGTCATACCCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
CDS-3UTR TCA 90 bp GAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTGCCTGAATAGGGTATaGCTTCCACTCAGACTTCAC +
Preference number: 4 (lower is better)
Translates to: EGDDQKSVEEGASEGDQLCLNRV*LPLRLH
Trigger: GTGAAGTCTGAGTGGAAGTCATACCCTATTCAGGCA...GAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp TTCACCACCAGCTTGAGAACGTTGCGGGCAGCAGTCAGCCAGAAGTCCTCTGCTTGCCTGAATAGGGTATaGCTTCCACTCAGACTTCAC +
Preference number: 4 (lower is better)
Translates to: FTTSLRTLRAAVSQKSSACLNRV*LPLRLH
Trigger: GTGAAGTCTGAGTGGAAGTCATACCCTATTCAGGCA...AGCAGAGGACTTCTGGCTGACTGCTGCCCGCAACGTTCTCAAGCTGGTGGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
CDS-3UTR TCA 90 bp TTACGTTCTTTGTCAAAGAAGATATTAAGCTTTGTTCTGACCCCAGGAGAGCTCACCAGCCCTCGGGGGTaGGGTACAGCGGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LRSLSKKILSFVLTPGELTSPRG*GTAGPP
Trigger: TGGAGGCCCCGCTGTACCTCACCCCCGAGGGCTGGT...GAGCTCTCCTGGGGTCAGAACAAAGCTTAATATCTTCTTTGACAAAGAACGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR TCA 90 bp TCAGTTCCTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGAGTGTCGAGGTGCCTaGGTTCTGCCCCTTCGTGGA +
Preference number: 4 (lower is better)
Translates to: SVPSGATRTFCFLSAAFSECRGA*VLPLRG
Trigger: TCCACGAAGGGGCAGAACTCAGGCACCTCGACACTC...TGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAGGAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR TCA 90 bp CTGGGTGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCGTTGCACAGGTGCACTaGGTTGTCCAGGTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LGATLKSRFGGREMKTLAVAQVH*VVQVLQ
Trigger: CTGAAGAACCTGGACAACTCAGTGCACCTGTGCAAC...GGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000430390.5
ENST00000438141.5
ENST00000473661.5
CDS-3UTR TCA 90 bp ACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCTGGATGCCGATGGCATaGGTTCTCCAGGTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: TGARNCSDFKGQRQQGTSWMPMA*VLQVLL
Trigger: CAGAAGCACCTGGAGAACTCATGCCATCGGCATCCA...GGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR TCA 90 bp TGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTGGACTTCTGGATGCCGATGGCATaGGTTCTCCAGGTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: CLSAQPPLFWRVCLALDFWMPMA*VLQVLL
Trigger: CAGAAGCACCTGGAGAACTCATGCCATCGGCATCCA...GAAGTCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR TCA 90 bp GGCCAATTCCTTCCCCTGTCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTTCATGCCAGGCACGATaGTGGTGGACCAAGCATTTG +
Preference number: 4 (lower is better)
Translates to: GQFLPLSHGINVPMPGRCSCQAR*WWTKHL
Trigger: CAAATGCTTGGTCCACCATCATCGTGCCTGGCATGA...ACACCTACCGGGCATAGGAACGTTAATGCCATGAGACAGGGGAAGGAATTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR TCA 90 bp GCTGGGTGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCTCATGCCAGGCACGATaGTGGTGGACCAAGCATTTG +
Preference number: 4 (lower is better)
Translates to: AGCHLEIKVRWEGNEDLSSCQAR*WWTKHL
Trigger: CAAATGCTTGGTCCACCATCATCGTGCCTGGCATGA...GCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000438141.5
ENST00000473661.5
CDS-3UTR TCA 90 bp TGGATCACAGCATCCTTCATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGTCATGCCAGGCACGATaGTGGTGGACCAAGCATTTG +
Preference number: 4 (lower is better)
Translates to: WITASFMPGTMMVDQAFGSCQAR*WWTKHL
Trigger: CAAATGCTTGGTCCACCATCATCGTGCCTGGCATGA...CCCAAATGCTTGGTCCACCATCATCGTGCCTGGCATGAAGGATGCTGTGATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR TCA 90 bp CTGGGTGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCCGGGCTGCTTATAGATaGGCTCAAAGGCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: LGATLKSRFGGREMKTLARAAYR*AQRLLC
Trigger: ACACAGGAGCCTTTGAGCTCATCTATAAGCAGCCCG...GGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000438141.5
CDS-3UTR TCA 90 bp ATCACAGCATCCTTCATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGGCAACCACAGTACTTACCTaGGGCCTCTTCCTCTACTGC +
Preference number: 4 (lower is better)
Translates to: ITASFMPGTMMVDQAFGATTVLT*GLFLYC
Trigger: GCAGTAGAGGAAGAGGCCTCAGGTAAGTACTGTGGT...TGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCATGAAGGATGCTGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR TCA 90 bp GATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTGAGATTAACAATGGGTaGCAGGTGGGAGGATGGAAG +
Preference number: 4 (lower is better)
Translates to: DDQKSVEEGASEGDQLFPEINNG*QVGGWK
Trigger: CTTCCATCCTCCCACCTGTCACCCATTGTTAATCTC...AGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCATGGGAGGGCTGAATaGGGAGTGGATCAACTAACA +
Preference number: 4 (lower is better)
Translates to: GDDQKSVEEGASEGDQLFHGRAE*GVDQLT
Trigger: TGTTAGTTGATCCACTCCTCATTCAGCCCTCCCATG...GAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR TCA 90 bp TTGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTGGACTTGGCCCATGGGAGGGCTaGATGAGGAGTGGATCAACT +
Preference number: 4 (lower is better)
Translates to: LPFSTTSTVLESVLSLGLGPWEG*MRSGST
Trigger: AGTTGATCCACTCCTCATTCAGCCCTCCCATGGGCC...AAGTCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR TCA 90 bp GGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACAGCCTTCCTTGTGCATaGCACACACAAGAGACAGCA +
Preference number: 4 (lower is better)
Translates to: GEEGDDQKSVEEGASEGDSLPCA*HTQETA
Trigger: TGCTGTCTCTTGTGTGTGTCATGCACAAGGAAGGCT...GTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR TCA 90 bp CAGTTGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTGGAGACCTGACTCACCCCTaGACATCGCAGTGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: QLPFSTTSTVLESVLSLGDLTHP*TSQCSE
Trigger: TTCAGAGCACTGCGATGTTCAGGGGTGAGTCAGGTC...TCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR TCA 90 bp TGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTGGACTTCGAACCCAGTTATACATaGACGCCCCTCCCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: CLSAQPPLFWRVCLALDFEPSYT*TPLPQV
Trigger: GACTTGGGGGAGGGGCGTTCATGTATAACTGGGTTC...GAAGTCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR TCA 90 bp GGCGGAAGCAGTGGATGCCGATGGCATGAGTTCTCCAGGTGCTTCTGGATGGAGGAGTCTTGGCCTATGTaGACCCAGTTATACATGAAC +
Preference number: 4 (lower is better)
Translates to: GGSSGCRWHEFSRCFWMEESWPM*TQLYMN
Trigger: GTTCATGTATAACTGGGTTCACATAGGCCAAGACTC...CTCCATCCAGAAGCACCTGGAGAACTCATGCCATCGGCATCCACTGCTTCCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR TCA 90 bp GGGCTGAGGTTTAGGCAAGGCCAATTCCTTCCCCTGTCTCATGGCATTAACGTTTGCTGGGTGCCACCTTaGAATCAAGGTTCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: GLRFRQGQFLPLSHGINVCWVPP*NQGSVG
Trigger: TCCCACCGAACCTTGATTTCAAGGTGGCACCCAGCA...AACGTTAATGCCATGAGACAGGGGAAGGAATTGGCCTTGCCTAAACCTCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR TCA 90 bp TTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACTGCTGGGTGCCACCTTaGAATCAAGGTTCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LTFRQVLGIVPTSKGRGNCWVPP*NQGSVG
Trigger: TCCCACCGAACCTTGATTTCAAGGTGGCACCCAGCA...GTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR TCA 90 bp GGGCTGAGGTTTAGGCAAGGCCAATTCCTTCCCCTGTCTCATGGCATTAACGTTCCTCTGCAGAAGGGCTaGGGTTTAGGCAAGGCCAAT +
Preference number: 4 (lower is better)
Translates to: GLRFRQGQFLPLSHGINVPLQKG*GLGKAN
Trigger: ATTGGCCTTGCCTAAACCTCAGCCCTTCTGCAGAGG...AACGTTAATGCCATGAGACAGGGGAAGGAATTGGCCTTGCCTAAACCTCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR TCA 90 bp GATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTCAGGCTGCTTATAGATaGGCTCAAAGGCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: DDQKSVEEGASEGDQLFPQAAYR*AQRLLC
Trigger: ACACAGGAGCCTTTGAGCTCATCTATAAGCAGCCTG...AGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp TTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTTGTTCTCTGGGAGGTGCCTGAGTTCTaGCCCTTCGTGGACCACTTG +
Preference number: 4 (lower is better)
Translates to: LTFLCPVGVILLAWLVLWEVPEF*PFVDHL
Trigger: CAAGTGGTCCACGAAGGGGCAGAACTCAGGCACCTC...CCAGAGAACAAGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR GCA 90 bp AGGGGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGAGTTGTTGCACAGGTaGACTGAGTTGTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: RGEEGDDQKSVEEGASEGELLHR*TELSRF
Trigger: GAACCTGGACAACTCAGTGCACCTGTGCAACAACTC...TCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp AGTTTCTTCATCTGTAAAGTGAAGGCTCACGCTCCCCACCCCTGGATCGGAGATCTCCTGTGTCACAGTTaGGGTCCAGCATCCGGTCAA +
Preference number: 4 (lower is better)
Translates to: SFFICKVKAHAPHPWIGDLLCHS*GPASGQ
Trigger: TTGACCGGATGCTGGACCGCAACTGTGACACAGGAG...ATCTCCGATCCAGGGGTGGGGAGCGTGAGCCTTCACTTTACAGATGAAGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR GCA 90 bp GAACCTCTGGCTAGACCACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGCACCTGAGTTTAGAACTTaGTCCTGTTTCAGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: EPLARPHVVWRKQWMPMAPEFRT*SCFRLV
Trigger: GACCAGCCTGAAACAGGAGCAAGTTCTAAACTCAGG...TGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCAGAGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
CDS-3UTR GCA 90 bp ACCACCAGCTTGAGAACGTTGCGGGCAGCAGTCAGCCAGAAGTCCTCTGCTCCCAACCTGATCATGACTTaGCCCATTTTGGATCCAGAA +
Preference number: 4 (lower is better)
Translates to: TTSLRTLRAAVSQKSSAPNLIMT*PILDPE
Trigger: TTCTGGATCCAAAATGGGGCAAGTCATGATCAGGTT...GGGAGCAGAGGACTTCTGGCTGACTGCTGCCCGCAACGTTCTCAAGCTGGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
CDS-3UTR GCA 90 bp AGGGGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAAAAGCCCAGTTTCACTaGTTCCTCCTCCTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: RGEEGDDQKSVEEGASEGKAQFH*FLLLRD
Trigger: GTCTCTGAGGAGGAGGAAGCAGTGAAACTGGGCTTT...TCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR GCA 90 bp ACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCATGTGGTTGGGTTGGCATaGATGATAGTGAGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: TLHGVLGGLKCVDHSILHVVGLA*MIVRVP
Trigger: AGGAACCCTCACTATCATGCATGCCAACCCAACCAC...ATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR GCA 90 bp CAGTTCCTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGCTGGAGAGCTGCCTCTaGTTCCCTGAATCCCTCGCT +
Preference number: 4 (lower is better)
Translates to: QFLREQLAPFVFCLLLSQLESCL*FPESLA
Trigger: AGCGAGGGATTCAGGGAAGCAGAGGCAGCTCTCCAG...CTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAGGAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR GCA 90 bp CCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCCTAGCTTCATATCCCACACTAACTTCTGTGTaGACTGTTACTGCACAAGGC +
Preference number: 4 (lower is better)
Translates to: PGQGQWGIEAGASLASYPTLTSV*TVTAQG
Trigger: GCCTTGTGCAGTAACAGTGCACACAGAAGTTAGTGT...GGGATATGAAGCTAGGGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR GCA 90 bp ACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCTGCAACTCTAGCACTTaGCCTTGGCTCCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: TGARNCSDFKGQRQQGTSCNSST*PWLPLS
Trigger: GGACAGTGGGAGCCAAGGGCAAGTGCTAGAGTTGCA...GGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp AATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTTCCTGTTTCTTGGGCTaGTTGTCTCCTGCACATAGG +
Preference number: 4 (lower is better)
Translates to: NCSDFKGQRQQGTSSWGPSCFLG*LSPAHR
Trigger: CCTATGTGCAGGAGACAAGCAGCCCAAGAAACAGGA...AGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp ATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCCTTCAGGATGCTGGGTaGCACCTTGAAATCAAGGTT +
Preference number: 4 (lower is better)
Translates to: IVPTSKGRGNKALPAGGLLQDAG*HLEIKV
Trigger: AACCTTGATTTCAAGGTGGCACCCAGCATCCTGAAG...GAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp TCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTTATCCCCCAGGCCCCTaGGCCTCTGGAATGTACCAA +
Preference number: 4 (lower is better)
Translates to: SHGINVPMPGRCHSASLAYPPGP*ASGMYQ
Trigger: TTGGTACATTCCAGAGGCGCAGGGGCCTGGGGGATA...AGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAATGCCATGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR GCA 90 bp GGTGGGTGTGGCTTATTGGATGTTTCATTTTTAGGTGACCTTGGCCCCTTGCTGATGGCCTCAGGCTCTTaGTGTGGACCCTGGGGTACA +
Preference number: 4 (lower is better)
Translates to: GGCGLLDVSFLGDLGPLLMASGS*CGPWGT
Trigger: TGTACCCCAGGGTCCACAGCAAGAGCCTGAGGCCAT...CAGCAAGGGGCCAAGGTCACCTAAAAATGAAACATCCAATAAGCCACACCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR GCA 90 bp GAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCGCATTAACGTTCCTATaGCCGGTAGGTGTCATTCTG +
Preference number: 4 (lower is better)
Translates to: EGDDQKSVEEGASEGDQLALTFL*PVGVIL
Trigger: CAGAATGACACCTACCGGGCATAGGAACGTTAATGC...GAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR GCA 90 bp TCAGAGCGCAGTGGCGTGATCACAGCTCACCACAGTTTTGATCTTCCCAGGCTCCTTGGCCTCTCAAAGTaGTGGGATAACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: SERSGVITAHHSFDLPRLLGLSK*WDNRCE
Trigger: CTCACACCTGTTATCCCAGCACTTTGAGAGGCCAAG...GAGCCTGGGAAGATCAAAACTGTGGTGAGCTGTGATCACGCCACTGCGCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR GCA 90 bp ACCACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGCATGAGTTCTCCAGGTCTCTTTTCTTCCTCCTaGCTTCATCCAGATGCCCAC +
Preference number: 4 (lower is better)
Translates to: TTCCLAEAVDADGMSSPGLFSSS*LHPDAH
Trigger: GTGGGCATCTGGATGAAGGCAGGAGGAAGAAAAGAG...ACCTGGAGAACTCATGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR CCA 90 bp ATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGTTCATCCACAAACTCTaGGGACACCAACACTGGGTT +
Preference number: 4 (lower is better)
Translates to: IRSLWRKGLLRETSSSLGFIHKL*GHQHWV
Trigger: AACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAA...CCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GAACCTCTGGCTAGACCACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGCATTCATCCACAAACTCTaGGGACACCAACACTGGGTT +
Preference number: 4 (lower is better)
Translates to: EPLARPHVVWRKQWMPMAFIHKL*GHQHWV
Trigger: AACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAA...TGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCAGAGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CAGGTCGAGGCCCACCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAATCTTGTCGATGTCCATGTaGGCCAAGTTGCTAAGGTAC +
Preference number: 4 (lower is better)
Translates to: QVEAHLSWLQDAGCHLEILSMSM*AKLLRY
Trigger: GTACCTTAGCAACTTGGCCCACATGGACATCGACAA...GATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTCGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GCAGGAGCCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAATCAAGGTTCGGGAGAAGGGCTGCGTaGAAAAGCGGATATAGCTGT +
Preference number: 4 (lower is better)
Translates to: AGAFLGFRMLGATLKSRFGRRAA*KSGYSC
Trigger: ACAGCTATATCCGCTTTTCCACGCAGCCCTTCTCCC...GAACCTTGATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGCTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000438141.5
CDS-3UTR CCA 90 bp ACAGAGCTTCATCCACAAACTCTGGGGACACCAACACTGGGTTTTTCTCCTGTTCTGAGGACCTGGCCCTaGTGTCGGAGTACATGGGGA +
Preference number: 4 (lower is better)
Translates to: TELHPQTLGTPTLGFSPVLRTWP*CRSTWG
Trigger: TCCCCATGTACTCCGACACCAGGGCCAGGTCCTCAG...AACAGGAGAAAAACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAAGCTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR CCA 90 bp ACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGGTGGAAGGGCGGATaGGTGGAGGATAAATGGGTG +
Preference number: 4 (lower is better)
Translates to: TGARNCSDFKGQRQQGTSRWKGG*VEDKWV
Trigger: CACCCATTTATCCTCCACCCATCCGCCCTTCCACCT...GGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GCTGGGTGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCAGGGAGTGGATAGATaGATGGGGAGTATGGAGCTG +
Preference number: 4 (lower is better)
Translates to: AGCHLEIKVRWEGNEDLSQGVDR*MGSMEL
Trigger: CAGCTCCATACTCCCCATCCATCTATCCACTCCCTG...GCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GGCCAATTCCTTCCCCTGTCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTATGGGGGAGTCTCTCTaGAAGAGGCAGGGATTTTCC +
Preference number: 4 (lower is better)
Translates to: GQFLPLSHGINVPMPGRCMGESL*KRQGFS
Trigger: GGAAAATCCCTGCCTCTTCCAGAGAGACTCCCCCAT...ACACCTACCGGGCATAGGAACGTTAATGCCATGAGACAGGGGAAGGAATTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR CCA 90 bp GTTGGATCCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCCTAGCTTCGAAATCAAGGTTCGGTaGGAGGGAAATGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: VGSRTRAVGNRSRGFPSFEIKVR*EGNEDL
Trigger: AAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTC...GAAGCTAGGGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TTGCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGAGGCCCACCTTTCTTaGCTTCAGGATGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LPLALTFRQVLGIVPTSKEAHLS*LQDAGC
Trigger: GCACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTC...CTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR CCA 90 bp CTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCTTGTTTCTTTTTATTTaGTGTTGGATCCAGGACAAG +
Preference number: 4 (lower is better)
Translates to: LLRETSSSLGVPASLGAALFLFI*CWIQDK
Trigger: CTTGTCCTGGATCCAACACCAAATAAAAAGAAACAA...GGCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CGGTCAATGACCACGCGCAGGGTGTCAGCTTGCACGCCAGCACAGAGCCGGGCATTGTTTCTTTTTATTTaGTGTTGGATCCAGGACAAG +
Preference number: 4 (lower is better)
Translates to: RSMTTRRVSACTPAQSRALFLFI*CWIQDK
Trigger: CTTGTCCTGGATCCAACACCAAATAAAAAGAAACAA...TGCCCGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCGCGTGGTCATTGACCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GGTGGGTGTGGCTTATTGGATGTTTCATTTTTAGGTGACCTTGGCCCCTTGCTGGTGGGGCCTGAGCGATaGACCATCTTCTTCTCCACC +
Preference number: 4 (lower is better)
Translates to: GGCGLLDVSFLGDLGPLLVGPER*TIFFST
Trigger: GGTGGAGAAGAAGATGGTCCATCGCTCAGGCCCCAC...CAGCAAGGGGCCAAGGTCACCTAAAAATGAAACATCCAATAAGCCACACCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR CCA 90 bp TGTGGCTTATTGGATGTTTCATTTTTAGGTGACCTTGGCCCCTTGCTGAAGAAGCCCATGGCAGCCTCCTaGGTGGACGGAACTCGGAGC +
Preference number: 4 (lower is better)
Translates to: CGLLDVSFLGDLGPLLKKPMAAS*VDGTRS
Trigger: GCTCCGAGTTCCGTCCACCCAGGAGGCTGCCATGGG...CTTCTTCAGCAAGGGGCCAAGGTCACCTAAAAATGAAACATCCAATAAGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR CCA 90 bp ATCACAGCATCCTTCATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGGCAAGCATCTCCTCCAGGTaGTCCATGCACATGATGCCA +
Preference number: 4 (lower is better)
Translates to: ITASFMPGTMMVDQAFGASISSR*SMHMMP
Trigger: TGGCATCATGTGCATGGACCACCTGGAGGAGATGCT...TGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCATGAAGGATGCTGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431204.5
CDS-3UTR CCA 90 bp TTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAGCAGGAGCCTTTCTTaGCTTCAGGATGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LTFRQVLGIVPTSKGRGNSRSLS*LQDAGC
Trigger: GCACCCAGCATCCTGAAGCCAAGAAAGGCTCCTGCT...GTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000438141.5
CDS-3UTR TCA 90 bp ACCACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGCATGAGTTCTCCAGGTTGCCTGAATAGGGTATaGCTTCCACTCAGACTTCAC +
Preference number: 4 (lower is better)
Translates to: TTCCLAEAVDADGMSSPGCLNRV*LPLRLH
Trigger: GTGAAGTCTGAGTGGAAGTCATACCCTATTCAGGCA...ACCTGGAGAACTCATGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
CDS-3UTR TCA 90 bp CTCGCACGCACACAGAGCTTCATCCACAAACTCTGGGGACACCAACACTGGGTTTGCCTGAATAGGGTATaGCTTCCACTCAGACTTCAC +
Preference number: 4 (lower is better)
Translates to: LARTQSFIHKLWGHQHWVCLNRV*LPLRLH
Trigger: GTGAAGTCTGAGTGGAAGTCATACCCTATTCAGGCA...AACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAAGCTCTGTGTGCGTGCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000496246.5
CDS-3UTR TCA 90 bp TTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACTCATGCCAGGCACGATaGTGGTGGACCAAGCATTTG +
Preference number: 4 (lower is better)
Translates to: LTFRQVLGIVPTSKGRGNSCQAR*WWTKHL
Trigger: CAAATGCTTGGTCCACCATCATCGTGCCTGGCATGA...GTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR TCA 90 bp CAGTTGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTGGATCATGCCAGGCACGATaGTGGTGGACCAAGCATTTG +
Preference number: 4 (lower is better)
Translates to: QLPFSTTSTVLESVLSLGSCQAR*WWTKHL
Trigger: CAAATGCTTGGTCCACCATCATCGTGCCTGGCATGA...TCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR TCA 90 bp TGTGGCTTATTGGATGTTTCATTTTTAGGTGACCTTGGCCCCTTGCTGAAGAAGCCAGCATCCGGTCAATaGCCACGCGCAGGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: CGLLDVSFLGDLGPLLKKPASGQ*PRAGCQ
Trigger: CTGACACCCTGCGCGTGGTCATTGACCGGATGCTGG...CTTCTTCAGCAAGGGGCCAAGGTCACCTAAAAATGAAACATCCAATAAGCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR TCA 90 bp AGTTTCTTCATCTGTAAAGTGAAGGCTCACGCTCCCCACCCCTGGATCGGAGATCGGGCTGCTTATAGATaGGCTCAAAGGCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: SFFICKVKAHAPHPWIGDRAAYR*AQRLLC
Trigger: ACACAGGAGCCTTTGAGCTCATCTATAAGCAGCCCG...ATCTCCGATCCAGGGGTGGGGAGCGTGAGCCTTCACTTTACAGATGAAGAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR TCA 90 bp TATTTGGTGTTGGATCCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCATTCTGATATACAACTaGGGCCCTCAAACCCCTGCA +
Preference number: 4 (lower is better)
Translates to: YLVLDPGQGQWGIEAGASILIYN*GPQTPA
Trigger: TGCAGGGGTTTGAGGGCCTCAGTTGTATATCAGAAT...GGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAACACCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR TCA 90 bp TCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTGCACATCTACAGACCTaGCTCACCCCTGAACATCGC +
Preference number: 4 (lower is better)
Translates to: SHGINVPMPGRCHSASLAAHLQT*LTPEHR
Trigger: GCGATGTTCAGGGGTGAGTCAGGTCTGTAGATGTGC...AGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAATGCCATGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR TCA 90 bp AAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCAGTGATTACAGAAACTaGCCCTTCAGAAGACCCCGT +
Preference number: 4 (lower is better)
Translates to: KREMIRSLWRKGLLRETSSDYRN*PFRRPR
Trigger: ACGGGGTCTTCTGAAGGGTCAGTTTCTGTAATCACT...GCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR TCA 90 bp ACCACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGCATGAGTTCTCCAGGTAGTGATTACAGAAACTaGCCCTTCAGAAGACCCCGT +
Preference number: 4 (lower is better)
Translates to: TTCCLAEAVDADGMSSPGSDYRN*PFRRPR
Trigger: ACGGGGTCTTCTGAAGGGTCAGTTTCTGTAATCACT...ACCTGGAGAACTCATGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR TCA 90 bp CTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGGCAAACCCCCTCCCCCAAGTCTaGCACAGCTTCTTAAGTCCA +
Preference number: 4 (lower is better)
Translates to: LREQLAPFVFCLLLSQANPLPQV*HSFLSP
Trigger: TGGACTTAAGAAGCTGTGTCAGACTTGGGGGAGGGG...GTTTGCCTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR TCA 90 bp ACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGGGAGAAGAGGGAGATaGTCAGAAGTCTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: TFRQVLGIVPTSKGRGNKGRRGR*SEVCGG
Trigger: TCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCC...CTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR TCA 90 bp GAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTGTTTCATTTTTAGGTaGCCTTGGCCCCTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: EGDDQKSVEEGASEGDQLCFIFR*PWPLAE
Trigger: TTCAGCAAGGGGCCAAGGTCACCTAAAAATGAAACA...GAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR TCA 90 bp AAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCAGATCTTCTTCTGCTTaGCAGCTCTCTCCACGTAGA +
Preference number: 4 (lower is better)
Translates to: KREMIRSLWRKGLLRETSRSSSA*QLSPRR
Trigger: TCTACGTGGAGAGAGCTGTCAAGCAGAAGAAGATCT...GCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR TCA 90 bp AGTTTCTTCATCTGTAAAGTGAAGGCTCACGCTCCCCACCCCTGGATCGGAGATACTGTCACCCATCGCTaGGCTATCCAGATCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SFFICKVKAHAPHPWIGDTVTHR*AIQILL
Trigger: CAGAAGGATCTGGATAGCTCAGCGATGGGTGACAGT...ATCTCCGATCCAGGGGTGGGGAGCGTGAGCCTTCACTTTACAGATGAAGAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR TCA 90 bp GTTCAACCCACTACAACTAAGCAGTGCCACACTTTTCTTCAGGTGGGTGTGGCTGAAGTCGAACAGCTGTaGTGGCTGGAACTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: VQPTTTKQCHTFLQVGVAEVEQL*WLELLV
Trigger: GACGAGGAGTTCCAGCCATCACAGCTGTTCGACTTC...AGCCACACCCACCTGAAGAAAAGTGTGGCACTGCTTAGTTGTAGTGGGTTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR TCA 90 bp TGTGGCTTATTGGATGTTTCATTTTTAGGTGACCTTGGCCCCTTGCTGAAGAAGACCCCCATCCGCCGATaGCACATCGCCATGGGCTTC +
Preference number: 4 (lower is better)
Translates to: CGLLDVSFLGDLGPLLKKTPIRR*HIAMGF
Trigger: GAAGCCCATGGCGATGTGTCATCGGCGGATGGGGGT...CTTCTTCAGCAAGGGGCCAAGGTCACCTAAAAATGAAACATCCAATAAGCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR GCA 90 bp GATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTCACGATCCAGATGTTaGGATCCCCTTCCATGTCTA +
Preference number: 4 (lower is better)
Translates to: DDQKSVEEGASEGDQLFPSRSRC*DPLPCL
Trigger: TAGACATGGAAGGGGATCGCAACATCTGGATCGTGA...AGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CAGTTCCTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGTCATCACCACGGGGTTaGCGTTCACCAGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: QFLREQLAPFVFCLLLSQSSPRG*RSPASA
Trigger: TGCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGA...CTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAGGAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR GCA 90 bp CTGGGTGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCGAGTTGTTGCACAGGTaGACTGAGTTGTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LGATLKSRFGGREMKTLAELLHR*TELSRF
Trigger: GAACCTGGACAACTCAGTGCACCTGTGCAACAACTC...GGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000430390.5
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GGCCAATTCCTTCCCCTGTCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTGAGTTGTTGCACAGGTaGACTGAGTTGTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: GQFLPLSHGINVPMPGRCELLHR*TELSRF
Trigger: GAACCTGGACAACTCAGTGCACCTGTGCAACAACTC...ACACCTACCGGGCATAGGAACGTTAATGCCATGAGACAGGGGAAGGAATTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR GCA 90 bp TCAGAGCGCAGTGGCGTGATCACAGCTCACCACAGTTTTGATCTTCCCAGGCTCTCTGGATGGAGTTGTTaGACAGGTGCACTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: SERSGVITAHHSFDLPRLSGWSC*TGALSC
Trigger: ACAACTCAGTGCACCTGTGCAACAACTCCATCCAGA...GAGCCTGGGAAGATCAAAACTGTGGTGAGCTGTGATCACGCCACTGCGCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR GCA 90 bp AGCATCCTTCATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACCCATTCTGGATGGAGTTGTTaGACAGGTGCACTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: SILHARHDDGGPSIWGTHSGWSC*TGALSC
Trigger: ACAACTCAGTGCACCTGTGCAACAACTCCATCCAGA...ATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCATGAAGGATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACTCTGGATGGAGTTGTTaGACAGGTGCACTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: GEEGDDQKSVEEGASEGDSGWSC*TGALSC
Trigger: ACAACTCAGTGCACCTGTGCAACAACTCCATCCAGA...GTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp TTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCGTGGGTAGAGTCCTCCTGTGTCACAGTTaGGGTCCAGCATCCGGTCAA +
Preference number: 4 (lower is better)
Translates to: LKSRFGGREMKTLAVGRVLLCHS*GPASGQ
Trigger: TTGACCGGATGCTGGACCGCAACTGTGACACAGGAG...GACTCTACCCACGGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGGCAAACCTCCTGTGTCACAGTTaGGGTCCAGCATCCGGTCAA +
Preference number: 4 (lower is better)
Translates to: LREQLAPFVFCLLLSQANLLCHS*GPASGQ
Trigger: TTGACCGGATGCTGGACCGCAACTGTGACACAGGAG...GTTTGCCTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR GCA 90 bp CAGTTGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTGGAAGGCCCTCAAACCCCTaGAGCCTGACCTATACCATA +
Preference number: 4 (lower is better)
Translates to: QLPFSTTSTVLESVLSLGRPSNP*SLTYTI
Trigger: TATGGTATAGGTCAGGCTGCAGGGGTTTGAGGGCCT...TCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR GCA 90 bp CAGTTGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTGGAAGGCTCTGCCTAAAATaGACCTGGGAGTCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: QLPFSTTSTVLESVLSLGRLCLK*TWESWP
Trigger: AGGCCAAGACTCCCAGGTGCATTTTAGGCAGAGCCT...TCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR GCA 90 bp TTGCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGTGTCACTCGAGGCTCTaGCCTAAATGTCCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: LPLALTFRQVLGIVPTSKCHSRL*PKCPQG
Trigger: GCCTTGGGGACATTTAGGGCAGAGCCTCGAGTGACA...CTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp TGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCGTGGGTCCTGTTTCTTGGGCTaGTTGTCTCCTGCACATAGG +
Preference number: 4 (lower is better)
Translates to: CHLEIKVRWEGNEDLSRGSCFLG*LSPAHR
Trigger: CCTATGTGCAGGAGACAAGCAGCCCAAGAAACAGGA...CCCACGGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CAGGAGAGCAGGAGCCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAATCCTTCAGGATGCTGGGTaGCACCTTGAAATCAAGGTT +
Preference number: 4 (lower is better)
Translates to: QESRSLSWLQDAGCHLEILQDAG*HLEIKV
Trigger: AACCTTGATTTCAAGGTGGCACCCAGCATCCTGAAG...GATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGCTCCTGCTCTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000438141.5
CDS-3UTR GCA 90 bp GGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCTTCAGGATGCTGGGTaGCACCTTGAAATCAAGGTT +
Preference number: 4 (lower is better)
Translates to: GDDQKSVEEGASEGDQLFLQDAG*HLEIKV
Trigger: AACCTTGATTTCAAGGTGGCACCCAGCATCCTGAAG...GAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp TCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTGCTCAAGCGATCTCCTaGCTTGGCCTCTCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: SHGINVPMPGRCHSASLAAQAIS*LGLSKC
Trigger: GCACTTTGAGAGGCCAAGGCAGGAGATCGCTTGAGC...AGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAATGCCATGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR GCA 90 bp ACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCGAGTTGTTGCACAGGTaGACTGAGTTGCCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: TGARNCSDFKGQRQQGTSELLHR*TELPSF
Trigger: GAAGGACGGCAACTCAGTGCACCTGTGCAACAACTC...GGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR CCA 90 bp GAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGTTCATCCACAAACTCTaGGGACACCAACACTGGGTT +
Preference number: 4 (lower is better)
Translates to: EEGDDQKSVEEGASEGDQFIHKL*GHQHWV
Trigger: AACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAA...CTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCTTGTCGATGTCCATGTaGGCCAAGTTGCTAAGGTAC +
Preference number: 4 (lower is better)
Translates to: ALTFRQVLGIVPTSKGRGLSMSM*AKLLRY
Trigger: GTACCTTAGCAACTTGGCCCACATGGACATCGACAA...GCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTGCGGGACTTGGCTCCTaGCTTCACGATCCAGATGTT +
Preference number: 4 (lower is better)
Translates to: SHGINVPMPGRCHSASLAAGLGS*LHDPDV
Trigger: AACATCTGGATCGTGAAGCCAGGAGCCAAGTCCCGC...AGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAATGCCATGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp TTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAGCATCTCCTCCAGGTaGTCCATGCACATGATGCCT +
Preference number: 4 (lower is better)
Translates to: LTFRQVLGIVPTSKGRGNSISSR*SMHMMP
Trigger: AGGCATCATGTGCATGGACCACCTGGAGGAGATGCT...GTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TCCCAGTTGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTAGCATCTCCTCCAGGTaGTCCATGCACATGATGCCT +
Preference number: 4 (lower is better)
Translates to: SQLPFSTTSTVLESVLSLSISSR*SMHMMP
Trigger: AGGCATCATGTGCATGGACCACCTGGAGGAGATGCT...AAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAACTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CCA 90 bp GGGCTGAGGTTTAGGCAAGGCCAATTCCTTCCCCTGTCTCATGGCATTAACGTTGGGAGAAGGGCTGCGTaGAAAAGCGGATATAGCTGT +
Preference number: 4 (lower is better)
Translates to: GLRFRQGQFLPLSHGINVGRRAA*KSGYSC
Trigger: ACAGCTATATCCGCTTTTCCACGCAGCCCTTCTCCC...AACGTTAATGCCATGAGACAGGGGAAGGAATTGGCCTTGCCTAAACCTCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp ACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCGGGAGAAGGGCTGCGTaGAAAAGCGGATATAGCTGT +
Preference number: 4 (lower is better)
Translates to: TGARNCSDFKGQRQQGTSGRRAA*KSGYSC
Trigger: ACAGCTATATCCGCTTTTCCACGCAGCCCTTCTCCC...GGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
CDS-3UTR CCA 90 bp TTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTTGTTCTCTGGAGACCACATGTTGTCTaGCGGAAGCAGTGGATGCCG +
Preference number: 4 (lower is better)
Translates to: LTFLCPVGVILLAWLVLWRPHVV*RKQWMP
Trigger: CGGCATCCACTGCTTCCGCCAGACAACATGTGGTCT...CCAGAGAACAAGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp TTGCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGAGACCACATGTTGTCTaGCGGAAGCAGTGGATGCCG +
Preference number: 4 (lower is better)
Translates to: LPLALTFRQVLGIVPTSKRPHVV*RKQWMP
Trigger: CGGCATCCACTGCTTCCGCCAGACAACATGTGGTCT...CTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACTGGGCCTGGAACCTCTaGCTAGACCACATGTTGTCT +
Preference number: 4 (lower is better)
Translates to: LTFRQVLGIVPTSKGRGNWAWNL*LDHMLS
Trigger: AGACAACATGTGGTCTAGCCAGAGGTTCCAGGCCCA...GTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp ACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGTGGGCCTGGAACCTCTaGCTAGACCACATGTTGTCT +
Preference number: 4 (lower is better)
Translates to: TFRQVLGIVPTSKGRGNKWAWNL*LDHMLS
Trigger: AGACAACATGTGGTCTAGCCAGAGGTTCCAGGCCCA...CTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTCATAGAGCTCAAAGCTaGCCTTCCGACACTGCACGG +
Preference number: 4 (lower is better)
Translates to: SHGINVPMPGRCHSASLAHRAQS*PSDTAR
Trigger: CCGTGCAGTGTCGGAAGGCCAGCTTTGAGCTCTATG...AGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAATGCCATGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp TTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGGCAAACTTCAATCAGCCAGGGCTaGAAGTCCTCCCCGAACACG +
Preference number: 4 (lower is better)
Translates to: FGSNSHLLFSVCCFLRQTSISQG*KSSPNT
Trigger: CGTGTTCGGGGAGGACTTCCAGCCCTGGCTGATTGA...AGTTTGCCTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CCA 90 bp GCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGACAATGGGTGACAGGTaGGAGGATGGAAGGATGAGT +
Preference number: 4 (lower is better)
Translates to: AFGLDLPTGARNCSDFKGTMGDR*EDGRMS
Trigger: ACTCATCCTTCCATCCTCCCACCTGTCACCCATTGT...CCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR CCA 90 bp ACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGATTTTCCTCCTTCCTaGAGAGCTGCCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: TFRQVLGIVPTSKGRGNKDFPPS*RAASAS
Trigger: GGAAGCAGAGGCAGCTCTCCAGGAAGGAGGAAAATC...CTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GCTGGGTGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCACAAGAGACAGCAATaGGGGAGTCTCTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: AGCHLEIKVRWEGNEDLSHKRQQ*GSLSGR
Trigger: TCTTCCAGAGAGACTCCCCCATTGCTGTCTCTTGTG...GCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR CCA 90 bp ATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTCACAAGAGACAGCAATaGGGGAGTCTCTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: MIRSLWRKGLLRETSSSLHKRQQ*GSLSGR
Trigger: TCTTCCAGAGAGACTCCCCCATTGCTGTCTCTTGTG...AAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCCTAGCTTCATATCCCCTTTTTATTTGGTGTTaGATCCAGGACAAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: PGQGQWGIEAGASLASYPLFIWC*IQDKGS
Trigger: ACTGCCCTTGTCCTGGATCCAACACCAAATAAAAAG...GGGATATGAAGCTAGGGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GGCTTCCCTAGCTTCATATCCCCCAGGCCCCTGCGCCTCTGGAATGTACCAACACTTTTTATTTGGTGTTaGATCCAGGACAAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: GFPSFISPRPLRLWNVPTLFIWC*IQDKGS
Trigger: ACTGCCCTTGTCCTGGATCCAACACCAAATAAAAAG...TGTTGGTACATTCCAGAGGCGCAGGGGCCTGGGGGATATGAAGCTAGGGAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GGGCTGAGGTTTAGGCAAGGCCAATTCCTTCCCCTGTCTCATGGCATTAACGTTATGTCTGTCCTTAGGTaGGAATTCTGGGCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: GLRFRQGQFLPLSHGINVMSVLR*EFWASL
Trigger: CAGCGAGGCCCAGAATTCCCACCTAAGGACAGACAT...AACGTTAATGCCATGAGACAGGGGAAGGAATTGGCCTTGCCTAAACCTCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp TTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTTGTTCTCTGGAGCAGGAGCCTTTCTTaGCTTCAGGATGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LTFLCPVGVILLAWLVLWSRSLS*LQDAGC
Trigger: GCACCCAGCATCCTGAAGCCAAGAAAGGCTCCTGCT...CCAGAGAACAAGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR CCA 90 bp TCAGTTCCTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCATCTGAGCCAGAGCTATaGTGCTGGGCACAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SVPSGATRTFCFLSAAFSSEPEL*CWAQWC
Trigger: GCACCACTGTGCCCAGCACCATAGCTCTGGCTCAGA...TGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAGGAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR TCA 90 bp GCTGGGTGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCTGCCTGAATAGGGTATaGCTTCCACTCAGACTTCAC +
Preference number: 4 (lower is better)
Translates to: AGCHLEIKVRWEGNEDLSCLNRV*LPLRLH
Trigger: GTGAAGTCTGAGTGGAAGTCATACCCTATTCAGGCA...GCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
CDS-3UTR TCA 90 bp ATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTTCTTCCTCTACTGCCTaGATAGGGTATGACTTCCAC +
Preference number: 4 (lower is better)
Translates to: MIRSLWRKGLLRETSSSLSSSTA*IGYDFH
Trigger: GTGGAAGTCATACCCTATTCAGGCAGTAGAGGAAGA...AAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000443148.5
ENST00000473661.5
CDS-3UTR TCA 90 bp TATGACTTCCACTCAGACTTCACCACCAGCTTGAGAACGTTGCGGGCAGCAGTCTCTTCCTCTACTGCCTaGATAGGGTATGACTTCCAC +
Preference number: 4 (lower is better)
Translates to: YDFHSDFTTSLRTLRAAVSSSTA*IGYDFH
Trigger: GTGGAAGTCATACCCTATTCAGGCAGTAGAGGAAGA...GACTGCTGCCCGCAACGTTCTCAAGCTGGTGGTGAAGTCTGAGTGGAAGTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
CDS-3UTR TCA 90 bp TTACGTTCTTTGTCAAAGAAGATATTAAGCTTTGTTCTGACCCCAGGAGAGCTCCACAGAGCCGGGCAGTaGCTGCTGTGGAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: LRSLSKKILSFVLTPGELHRAGQ*LLWRVP
Trigger: TGGCACCCTCCACAGCAGTCACTGCCCGGCTCTGTG...GAGCTCTCCTGGGGTCAGAACAAAGCTTAATATCTTCTTTGACAAAGAACGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR TCA 90 bp CTAGGCTTGAGGCCTGTTCTGGTTCCAGAACCTGATCATGACTTGCCCCATTTTCGGGCTGCTTATAGATaGGCTCAAAGGCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: LGLRPVLVPEPDHDLPHFRAAYR*AQRLLC
Trigger: ACACAGGAGCCTTTGAGCTCATCTATAAGCAGCCCG...AAAATGGGGCAAGTCATGATCAGGTTCTGGAACCAGAACAGGCCTCAAGCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR TCA 90 bp AGTTTCTTCATCTGTAAAGTGAAGGCTCACGCTCCCCACCCCTGGATCGGAGATAGATCAGAGAGTGGGTaGATACGTGGGTGGATGAGT +
Preference number: 4 (lower is better)
Translates to: SFFICKVKAHAPHPWIGDRSESG*IRGWMS
Trigger: ACTCATCCACCCACGTATTCACCCACTCTCTGATCT...ATCTCCGATCCAGGGGTGGGGAGCGTGAGCCTTCACTTTACAGATGAAGAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR TCA 90 bp TCCCAGTTGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTAGCCTTCCTTGTGCATaGCACACACAAGAGACAGCA +
Preference number: 4 (lower is better)
Translates to: SQLPFSTTSTVLESVLSLSLPCA*HTQETA
Trigger: TGCTGTCTCTTGTGTGTGTCATGCACAAGGAAGGCT...AAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAACTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR TCA 90 bp CGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCACTCCCAGAATCCTaGTACAGAGCTACAACCCTT +
Preference number: 4 (lower is better)
Translates to: RQVLGIVPTSKGRGNKALPLPES*YRATTL
Trigger: AAGGGTTGTAGCTCTGTATCAGGATTCTGGGAGTGG...AAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR TCA 90 bp TGTGGCTTATTGGATGTTTCATTTTTAGGTGACCTTGGCCCCTTGCTGAAGAAGACTGTCCACTGGGTGTaGGTCACAGGTCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: CGLLDVSFLGDLGPLLKKTVHWV*VTGRGP
Trigger: TGGGCCTCGACCTGTGACTCACACCCAGTGGACAGT...CTTCTTCAGCAAGGGGCCAAGGTCACCTAAAAATGAAACATCCAATAAGCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR TCA 90 bp TTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAAGATTTTGGCGTTTCTaGGCCGGTTCATGTGAGACG +
Preference number: 4 (lower is better)
Translates to: LALTFRQVLGIVPTSKGRRFWRF*AGSCET
Trigger: CGTCTCACATGAACCGGCTCAGAAACGCCAAAATCT...TCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR TCA 90 bp ATCACAGCATCCTTCATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGGCAAGATCTTCTTCTGCTTaGCAGCTCTCTCCACGTAGA +
Preference number: 4 (lower is better)
Translates to: ITASFMPGTMMVDQAFGARSSSA*QLSPRR
Trigger: TCTACGTGGAGAGAGCTGTCAAGCAGAAGAAGATCT...TGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCATGAAGGATGCTGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
CDS-3UTR GCA 90 bp AGCCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAATCAAGGTTCGGTGGTCACGATCCAGATGTTaGGATCCCCTTCCATGTCTA +
Preference number: 4 (lower is better)
Translates to: SLSWLQDAGCHLEIKVRWSRSRC*DPLPCL
Trigger: TAGACATGGAAGGGGATCGCAACATCTGGATCGTGA...CCACCGAACCTTGATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000438141.5
CDS-3UTR GCA 90 bp TCAAACTTGGTGCCAAAGATGAGGAGGGGCCGCTCAATATACTTCTGCACCACCGAGTTGTTGCACAGGTaGACTGAGTTGTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: SNLVPKMRRGRSIYFCTTELLHR*TELSRF
Trigger: GAACCTGGACAACTCAGTGCACCTGTGCAACAACTC...GGTGGTGCAGAAGTATATTGAGCGGCCCCTCCTCATCTTTGGCACCAAGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000431204.5
CDS-3UTR GCA 90 bp ATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTTCTGGATGGAGTTGTTaGACAGGTGCACTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: MIRSLWRKGLLRETSSSLSGWSC*TGALSC
Trigger: ACAACTCAGTGCACCTGTGCAACAACTCCATCCAGA...AAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR GCA 90 bp AAGGTACTCCTCGCACGCACACAGAGCTTCATCCACAAACTCTGGGGACACCAACCTGAGTTTAGAACTTaGTCCTGTTTCAGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: KVLLARTQSFIHKLWGHQPEFRT*SCFRLV
Trigger: GACCAGCCTGAAACAGGAGCAAGTTCTAAACTCAGG...TTGGTGTCCCCAGAGTTTGTGGATGAAGCTCTGTGTGCGTGCGAGGAGTACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000496246.5
CDS-3UTR GCA 90 bp CAGTTGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTGGAAAAGCCCAGTTTCACTaGTTCCTCCTCCTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: QLPFSTTSTVLESVLSLGKAQFH*FLLLRD
Trigger: GTCTCTGAGGAGGAGGAAGCAGTGAAACTGGGCTTT...TCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR GCA 90 bp CTGGGTGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCACCAAGCCTTCCTTGTaGATGACACACACAAGAGAC +
Preference number: 4 (lower is better)
Translates to: LGATLKSRFGGREMKTLATKPSL*MTHTRD
Trigger: GTCTCTTGTGTGTGTCATGCACAAGGAAGGCTTGGT...GGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR GCA 90 bp TCAGTTCCTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCATGTCACTCGAGGCTCTaGCCTAAATGTCCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: SVPSGATRTFCFLSAAFSCHSRL*PKCPQG
Trigger: GCCTTGGGGACATTTAGGGCAGAGCCTCGAGTGACA...TGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAGGAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR GCA 90 bp TTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGGCAAACTTGCAACTCTAGCACTTaGCCTTGGCTCCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: FGSNSHLLFSVCCFLRQTCNSST*PWLPLS
Trigger: GGACAGTGGGAGCCAAGGGCAAGTGCTAGAGTTGCA...AGTTTGCCTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR GCA 90 bp TTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACTCCTGTTTCTTGGGCTaGTTGTCTCCTGCACATAGG +
Preference number: 4 (lower is better)
Translates to: LTFRQVLGIVPTSKGRGNSCFLG*LSPAHR
Trigger: CCTATGTGCAGGAGACAAGCAGCCCAAGAAACAGGA...GTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CTGGGTGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCATCTTGGGTAAGCCATaGCTCCTCTTTCAGACTCAG +
Preference number: 4 (lower is better)
Translates to: LGATLKSRFGGREMKTLAILGKP*LLFQTQ
Trigger: CTGAGTCTGAAAGAGGAGGCATGGCTTACCCAAGAT...GGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR GCA 90 bp GGCCAATTCCTTCCCCTGTCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTATCTTGGGTAAGCCATaGCTCCTCTTTCAGACTCAG +
Preference number: 4 (lower is better)
Translates to: GQFLPLSHGINVPMPGRCILGKP*LLFQTQ
Trigger: CTGAGTCTGAAAGAGGAGGCATGGCTTACCCAAGAT...ACACCTACCGGGCATAGGAACGTTAATGCCATGAGACAGGGGAAGGAATTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR GCA 90 bp ACGCACACAGAGCTTCATCCACAAACTCTGGGGACACCAACACTGGGTTTTTCTGAGGACCGGGAAACCTaGAGAAAGATGCGGAATAGG +
Preference number: 4 (lower is better)
Translates to: THTELHPQTLGTPTLGFSEDRET*RKMRNR
Trigger: CCTATTCCGCATCTTTCTGCAGGTTTCCCGGTCCTC...AGAAAAACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAAGCTCTGTGTGCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR CCA 90 bp TCAGTTCCTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGCGGGACTTGGCTCCTaGCTTCACGATCCAGATGTT +
Preference number: 4 (lower is better)
Translates to: SVPSGATRTFCFLSAAFSAGLGS*LHDPDV
Trigger: AACATCTGGATCGTGAAGCCAGGAGCCAAGTCCCGC...TGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAGGAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CCA 90 bp TTGCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGAGCATCTCCTCCAGGTaGTCCATGCACATGATGCCT +
Preference number: 4 (lower is better)
Translates to: LPLALTFRQVLGIVPTSKSISSR*SMHMMP
Trigger: AGGCATCATGTGCATGGACCACCTGGAGGAGATGCT...CTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GTTCAACCCACTACAACTAAGCAGTGCCACACTTTTCTTCAGGTGGGTGTGGCTGGGAGAAGGGCTGCGTaGAAAAGCGGATATAGCTGT +
Preference number: 4 (lower is better)
Translates to: VQPTTTKQCHTFLQVGVAGRRAA*KSGYSC
Trigger: ACAGCTATATCCGCTTTTCCACGCAGCCCTTCTCCC...AGCCACACCCACCTGAAGAAAAGTGTGGCACTGCTTAGTTGTAGTGGGTTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp TTGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTGGACTTGGGAGAAGGGCTGCGTaGAAAAGCGGATATAGCTGT +
Preference number: 4 (lower is better)
Translates to: LPFSTTSTVLESVLSLGLGRRAA*KSGYSC
Trigger: ACAGCTATATCCGCTTTTCCACGCAGCCCTTCTCCC...AAGTCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CCA 90 bp ACAGAGCTTCATCCACAAACTCTGGGGACACCAACACTGGGTTTTTCTCCTGTTAGACCACATGTTGTCTaGCGGAAGCAGTGGATGCCG +
Preference number: 4 (lower is better)
Translates to: TELHPQTLGTPTLGFSPVRPHVV*RKQWMP
Trigger: CGGCATCCACTGCTTCCGCCAGACAACATGTGGTCT...AACAGGAGAAAAACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAAGCTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR CCA 90 bp TTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCGTGGGTAGAGTCTGGGCCTGGAACCTCTaGCTAGACCACATGTTGTCT +
Preference number: 4 (lower is better)
Translates to: LKSRFGGREMKTLAVGRVWAWNL*LDHMLS
Trigger: AGACAACATGTGGTCTAGCCAGAGGTTCCAGGCCCA...GACTCTACCCACGGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CTTGAATTTGCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTTGGGAGGCTGAGGTaGATGGATCATGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: LEFAFGLDLPTGARNCSDFGRLR*MDHEVR
Trigger: CCTGACCTCATGATCCATCCACCTCAGCCTCCCAAA...GTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAAATTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTACAATGGGTGACAGGTaGGAGGATGGAAGGATGAGT +
Preference number: 4 (lower is better)
Translates to: RQVLGIVPTSKGRGNKALTMGDR*EDGRMS
Trigger: ACTCATCCTTCCATCCTCCCACCTGTCACCCATTGT...AAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TGGAACCTCTGGCTAGACCACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGCAGATAGGTAGTAGATaGGAGAATGGAATAGCAGGT +
Preference number: 4 (lower is better)
Translates to: WNLWLDHMLSGGSSGCRWQIGSR*ENGIAG
Trigger: ACCTGCTATTCCATTCTCCCATCTACTACCTATCTG...CCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCAGAGGTTCCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR CCA 90 bp GGCTTCCCTAGCTTCATATCCCCCAGGCCCCTGCGCCTCTGGAATGTACCAACACAACTAACAAACGGATaGGAAGACAAGTGTCTAAGT +
Preference number: 4 (lower is better)
Translates to: GFPSFISPRPLRLWNVPTQLTNG*EDKCLS
Trigger: ACTTAGACACTTGTCTTCCCATCCGTTTGTTAGTTG...TGTTGGTACATTCCAGAGGCGCAGGGGCCTGGGGGATATGAAGCTAGGGAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCGTGGGTAGAGTCATGGGGGAGTCTCTCTaGAAGAGGCAGGGATTTTCC +
Preference number: 4 (lower is better)
Translates to: LKSRFGGREMKTLAVGRVMGESL*KRQGFS
Trigger: GGAAAATCCCTGCCTCTTCCAGAGAGACTCCCCCAT...GACTCTACCCACGGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CTTGAATTTGCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTGTGCCCCTTATCCTaGCACACAACCAAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: LEFAFGLDLPTGARNCSDLCPLS*HTTKPS
Trigger: GGAAGGCTTGGTTGTGTGCCAGGATAAGGGGCACAA...GTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAAATTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TTGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTGGACTTTTGTGCCCCTTATCCTaGCACACAACCAAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: LPFSTTSTVLESVLSLGLLCPLS*HTTKPS
Trigger: GGAAGGCTTGGTTGTGTGCCAGGATAAGGGGCACAA...AAGTCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CCA 90 bp GGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCGAAATCAAGGTTCGGTaGGAGGGAAATGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: GDDQKSVEEGASEGDQLFEIKVR*EGNEDL
Trigger: AAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTC...GAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CTGTCTGAGGTCAAACTTGGTGCCAAAGATGAGGAGGGGCCGCTCAATATACTTCATCCTCATCCTCAGTaGTGTCACTGTCACCCATCG +
Preference number: 4 (lower is better)
Translates to: LSEVKLGAKDEEGPLNILHPHPQ*CHCHPS
Trigger: CGATGGGTGACAGTGACACCACTGAGGATGAGGATG...AAGTATATTGAGCGGCCCCTCCTCATCTTTGGCACCAAGTTTGACCTCAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000431204.5
CDS-3UTR CCA 90 bp CAGTTGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTGGACAACCTCCACTGTTCTaGAGAGTGTGCTTAGCCTTG +
Preference number: 4 (lower is better)
Translates to: QLPFSTTSTVLESVLSLGQPPLF*RVCLAL
Trigger: CAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTG...TCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CCA 90 bp CAGTTCCTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGGCCCAAGAAGAGTTCTaGGCCTGCATAAGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: QFLREQLAPFVFCLLLSQAQEEF*ACIRES
Trigger: ACTCTCCCTTATGCAGGCCCAGAACTCTTCTTGGGC...CTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAGGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR TCA 90 bp CGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTTCTTCCTCTACTGCCTaGATAGGGTATGACTTCCAC +
Preference number: 4 (lower is better)
Translates to: RQVLGIVPTSKGRGNKALSSSTA*IGYDFH
Trigger: GTGGAAGTCATACCCTATTCAGGCAGTAGAGGAAGA...AAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
CDS-3UTR TCA 90 bp TTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGATCTTCCTCTACTGCCTaGATAGGGTATGACTTCCAC +
Preference number: 4 (lower is better)
Translates to: LALTFRQVLGIVPTSKGRSSSTA*IGYDFH
Trigger: GTGGAAGTCATACCCTATTCAGGCAGTAGAGGAAGA...TCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
CDS-3UTR TCA 90 bp CAGTTCCTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGCATGGGAGGGCTGAATaGGGAGTGGATCAACTAACA +
Preference number: 4 (lower is better)
Translates to: QFLREQLAPFVFCLLLSQHGRAE*GVDQLT
Trigger: TGTTAGTTGATCCACTCCTCATTCAGCCCTCCCATG...CTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAGGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR TCA 90 bp CAGTTGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTGGAAGTGATTACAGAAACTaGCCCTTCAGAAGACCCCGT +
Preference number: 4 (lower is better)
Translates to: QLPFSTTSTVLESVLSLGSDYRN*PFRRPR
Trigger: ACGGGGTCTTCTGAAGGGTCAGTTTCTGTAATCACT...TCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR TCA 90 bp TGTGGCTTATTGGATGTTTCATTTTTAGGTGACCTTGGCCCCTTGCTGAAGAAGCGCCCCATCCACTCTTaGCCCTCCAACAGCAATGGA +
Preference number: 4 (lower is better)
Translates to: CGLLDVSFLGDLGPLLKKRPIHS*PSNSNG
Trigger: TCCATTGCTGTTGGAGGGTCAAGAGTGGATGGGGCG...CTTCTTCAGCAAGGGGCCAAGGTCACCTAAAAATGAAACATCCAATAAGCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR TCA 90 bp TCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTAGATTTTGGCGTTTCTaGGCCGGTTCATGTGAGACG +
Preference number: 4 (lower is better)
Translates to: SHGINVPMPGRCHSASLARFWRF*AGSCET
Trigger: CGTCTCACATGAACCGGCTCAGAAACGCCAAAATCT...AGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAATGCCATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR GCA 90 bp ACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCTCACGATCCAGATGTTaGGATCCCCTTCCATGTCTA +
Preference number: 4 (lower is better)
Translates to: TGARNCSDFKGQRQQGTSSRSRC*DPLPCL
Trigger: TAGACATGGAAGGGGATCGCAACATCTGGATCGTGA...GGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp TTGCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGAGTTGTTGCACAGGTaGACTGAGTTGTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LPLALTFRQVLGIVPTSKELLHR*TELSRF
Trigger: GAACCTGGACAACTCAGTGCACCTGTGCAACAACTC...CTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp TTGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTGGACTTGAGTTGTTGCACAGGTaGACTGAGTTGTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LPFSTTSTVLESVLSLGLELLHR*TELSRF
Trigger: GAACCTGGACAACTCAGTGCACCTGTGCAACAACTC...AAGTCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR GCA 90 bp AGTTTCTTCATCTGTAAAGTGAAGGCTCACGCTCCCCACCCCTGGATCGGAGATCCTGAGTTTAGAACTTaGTCCTGTTTCAGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: SFFICKVKAHAPHPWIGDPEFRT*SCFRLV
Trigger: GACCAGCCTGAAACAGGAGCAAGTTCTAAACTCAGG...ATCTCCGATCCAGGGGTGGGGAGCGTGAGCCTTCACTTTACAGATGAAGAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR GCA 90 bp TGTGGCTTATTGGATGTTTCATTTTTAGGTGACCTTGGCCCCTTGCTGAAGAAGCTGGAGAGCTGCCTCTaGTTCCCTGAATCCCTCGCT +
Preference number: 4 (lower is better)
Translates to: CGLLDVSFLGDLGPLLKKLESCL*FPESLA
Trigger: AGCGAGGGATTCAGGGAAGCAGAGGCAGCTCTCCAG...CTTCTTCAGCAAGGGGCCAAGGTCACCTAAAAATGAAACATCCAATAAGCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR GCA 90 bp TCCCAGTTGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTACCAAGCCTTCCTTGTaGATGACACACACAAGAGAC +
Preference number: 4 (lower is better)
Translates to: SQLPFSTTSTVLESVLSLTKPSL*MTHTRD
Trigger: GTCTCTTGTGTGTGTCATGCACAAGGAAGGCTTGGT...AAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAACTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR GCA 90 bp CAGTTCCTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGTCCTGTTTCTTGGGCTaGTTGTCTCCTGCACATAGG +
Preference number: 4 (lower is better)
Translates to: QFLREQLAPFVFCLLLSQSCFLG*LSPAHR
Trigger: CCTATGTGCAGGAGACAAGCAGCCCAAGAAACAGGA...CTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAGGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR GCA 90 bp ACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCCTTCAGGATGCTGGGTaGCACCTTGAAATCAAGGTT +
Preference number: 4 (lower is better)
Translates to: TGARNCSDFKGQRQQGTSLQDAG*HLEIKV
Trigger: AACCTTGATTTCAAGGTGGCACCCAGCATCCTGAAG...GGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp GGGCTGAGGTTTAGGCAAGGCCAATTCCTTCCCCTGTCTCATGGCATTAACGTTGCATTAACGTTCCTATaGCCGGTAGGTGTCATTCTG +
Preference number: 4 (lower is better)
Translates to: GLRFRQGQFLPLSHGINVALTFL*PVGVIL
Trigger: CAGAATGACACCTACCGGGCATAGGAACGTTAATGC...AACGTTAATGCCATGAGACAGGGGAAGGAATTGGCCTTGCCTAAACCTCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR GCA 90 bp TTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCGTGGGTAGAGTCCTTGGCCTCTCAAAGTaGTGGGATAACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: LKSRFGGREMKTLAVGRVLGLSK*WDNRCE
Trigger: CTCACACCTGTTATCCCAGCACTTTGAGAGGCCAAG...GACTCTACCCACGGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR GCA 90 bp CTTGAATTTGCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTCTGGATGGAGTTGTTaGACAGGTGCACTGAGTTGC +
Preference number: 4 (lower is better)
Translates to: LEFAFGLDLPTGARNCSDSGWSC*TGALSC
Trigger: GCAACTCAGTGCACCTGTGCAACAACTCCATCCAGA...GTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAAATTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR GCA 90 bp TTGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTGGACTTCTGTTCTGGAGAGTGTaGTTAGCCTTGGACTTCTCC +
Preference number: 4 (lower is better)
Translates to: LPFSTTSTVLESVLSLGLLFWRV*LALDFS
Trigger: GGAGAAGTCCAAGGCTAAGCACACTCTCCAGAACAG...AAGTCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CCA 90 bp GACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAATTCATCCACAAACTCTaGGGACACCAACACTGGGTT +
Preference number: 4 (lower is better)
Translates to: DLPTGARNCSDFKGQRQQFIHKL*GHQHWV
Trigger: AACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAA...TTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACTTCATCCACAAACTCTaGGGACACCAACACTGGGTT +
Preference number: 4 (lower is better)
Translates to: LTFRQVLGIVPTSKGRGNFIHKL*GHQHWV
Trigger: AACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAA...GTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TGTGGCTTATTGGATGTTTCATTTTTAGGTGACCTTGGCCCCTTGCTGAAGAAGCCTTCCATGTCTATCTaGGGTACCACGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CGLLDVSFLGDLGPLLKKPSMSI*GTTACS
Trigger: GCTGCAGGCCGTGGTACCCCAGATAGACATGGAAGG...CTTCTTCAGCAAGGGGCCAAGGTCACCTAAAAATGAAACATCCAATAAGCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp TGTGGCTTATTGGATGTTTCATTTTTAGGTGACCTTGGCCCCTTGCTGAAGAAGTCAATCAGCCAGGGCTaGAAGTCCTCCCCGAACACG +
Preference number: 4 (lower is better)
Translates to: CGLLDVSFLGDLGPLLKKSISQG*KSSPNT
Trigger: CGTGTTCGGGGAGGACTTCCAGCCCTGGCTGATTGA...CTTCTTCAGCAAGGGGCCAAGGTCACCTAAAAATGAAACATCCAATAAGCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp CTGTTCTGGTTCCAGAACCTGATCATGACTTGCCCCATTTTGGATCCAGAACCTTTTGGGAGGCTGAGGTaGATGGATCATGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: LFWFQNLIMTCPILDPEPFGRLR*MDHEVR
Trigger: CCTGACCTCATGATCCATCCACCTCAGCCTCCCAAA...AGGTTCTGGATCCAAAATGGGGCAAGTCATGATCAGGTTCTGGAACCAGAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
CDS-3UTR CCA 90 bp GATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGATGGATGGATAGATaGGTAGATGTGAATCATACA +
Preference number: 4 (lower is better)
Translates to: DQKSVEEGASEGDQLFPWGWMDR*VDVNHT
Trigger: TGTATGATTCACATCTACCCATCTATCCATCCATCC...CCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR CCA 90 bp ATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGAATGGATGAGTGGATaGCCTGAAGAACAGATAGGT +
Preference number: 4 (lower is better)
Translates to: MIRSLWRKGLLRETSSSLEWMSG*PEEQIG
Trigger: ACCTATCTGTTCTTCAGGCCATCCACTCATCCATTC...AAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CAGTTCCTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGCCTGGGACAGAAGAATaGATGAGTGGATGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: QFLREQLAPFVFCLLLSQPGTEE*MSGWPE
Trigger: TTCAGGCCATCCACTCATCCATTCTTCTGTCCCAGG...CTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAGGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CCA 90 bp TATTTGGTGTTGGATCCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCAAGTGTCTAAGTACCTaGGACAGAAGAATGGATGAG +
Preference number: 4 (lower is better)
Translates to: YLVLDPGQGQWGIEAGASKCLST*DRRMDE
Trigger: CTCATCCATTCTTCTGTCCCAGGTACTTAGACACTT...GGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAACACCAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CAGGTCGAGGCCCACCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAATCCAACTAACAAACGGATaGGAAGACAAGTGTCTAAGT +
Preference number: 4 (lower is better)
Translates to: QVEAHLSWLQDAGCHLEIQLTNG*EDKCLS
Trigger: ACTTAGACACTTGTCTTCCCATCCGTTTGTTAGTTG...GATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTCGACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TCAGTTCCTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAATGGGGGAGTCTCTCTaGAAGAGGCAGGGATTTTCC +
Preference number: 4 (lower is better)
Translates to: SVPSGATRTFCFLSAAFSMGESL*KRQGFS
Trigger: GGAAAATCCCTGCCTCTTCCAGAGAGACTCCCCCAT...TGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAGGAACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CCA 90 bp CTTGGCTCCTGGCTTCACGATCCAGATGTTGCGATCCCCTTCCATGTCTATCTGGAAATCAAGGTTCGGTaGGAGGGAAATGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: LGSWLHDPDVAIPFHVYLEIKVR*EGNEDL
Trigger: AAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTC...CAGATAGACATGGAAGGGGATCGCAACATCTGGATCGTGAAGCCAGGAGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000430390.5
CDS-3UTR CCA 90 bp AGTTTCTTCATCTGTAAAGTGAAGGCTCACGCTCCCCACCCCTGGATCGGAGATACCCTCCAACAGCAATaGAGTCAAGCCCCAAATACT +
Preference number: 4 (lower is better)
Translates to: SFFICKVKAHAPHPWIGDTLQQQ*SQAPNT
Trigger: AGTATTTGGGGCTTGACTCCATTGCTGTTGGAGGGT...ATCTCCGATCCAGGGGTGGGGAGCGTGAGCCTTCACTTTACAGATGAAGAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp CAGGTCGAGGCCCACCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAATCTTCTTCAGGTGGGTGTaGCTTATTGGATGTTTCATT +
Preference number: 4 (lower is better)
Translates to: QVEAHLSWLQDAGCHLEIFFRWV*LIGCFI
Trigger: AATGAAACATCCAATAAGCCACACCCACCTGAAGAA...GATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTCGACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR CCA 90 bp GGTGGGTGTGGCTTATTGGATGTTTCATTTTTAGGTGACCTTGGCCCCTTGCTGAACAGCTGTGATGGCTaGAACTCCTCGTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: GGCGLLDVSFLGDLGPLLNSCDG*NSSSSS
Trigger: AGATGAGGACGAGGAGTTCCAGCCATCACAGCTGTT...CAGCAAGGGGCCAAGGTCACCTAAAAATGAAACATCCAATAAGCCACACCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR CCA 90 bp TTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCGTGGGTAGAGTCAACAGCTGTGATGGCTaGAACTCCTCGTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: LKSRFGGREMKTLAVGRVNSCDG*NSSSSS
Trigger: AGATGAGGACGAGGAGTTCCAGCCATCACAGCTGTT...GACTCTACCCACGGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000430390.5
CDS-3UTR CCA 90 bp TTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGGCAAACTCCAGAGCTATGGTGCTaGGCACAGTGGTGCATTTCT +
Preference number: 4 (lower is better)
Translates to: FGSNSHLLFSVCCFLRQTPELWC*AQWCIS
Trigger: AGAAATGCACCACTGTGCCCAGCACCATAGCTCTGG...AGTTTGCCTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR TCA 90 bp GTTCAACCCACTACAACTAAGCAGTGCCACACTTTTCTTCAGGTGGGTGTGGCTTCTTCCTCTACTGCCTaGATAGGGTATGACTTCCAC +
Preference number: 4 (lower is better)
Translates to: VQPTTTKQCHTFLQVGVASSSTA*IGYDFH
Trigger: GTGGAAGTCATACCCTATTCAGGCAGTAGAGGAAGA...AGCCACACCCACCTGAAGAAAAGTGTGGCACTGCTTAGTTGTAGTGGGTTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR TCA 90 bp TTACGTTCTTTGTCAAAGAAGATATTAAGCTTTGTTCTGACCCCAGGAGAGCTCTCACAGCGCTGGACCTaGGTGTCGAGGTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: LRSLSKKILSFVLTPGELSQRWT*VSRCLS
Trigger: ACTCAGGCACCTCGACACTCAGGTCCAGCGCTGTGA...GAGCTCTCCTGGGGTCAGAACAAAGCTTAATATCTTCTTTGACAAAGAACGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR TCA 90 bp CTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGGCAAACATTCTGATATACAACTaGGGCCCTCAAACCCCTGCA +
Preference number: 4 (lower is better)
Translates to: LREQLAPFVFCLLLSQANILIYN*GPQTPA
Trigger: TGCAGGGGTTTGAGGGCCTCAGTTGTATATCAGAAT...GTTTGCCTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR TCA 90 bp TTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGGCAAACTCCACTCCCAGAATCCTaGTACAGAGCTACAACCCTT +
Preference number: 4 (lower is better)
Translates to: FGSNSHLLFSVCCFLRQTPLPES*YRATTL
Trigger: AAGGGTTGTAGCTCTGTATCAGGATTCTGGGAGTGG...AGTTTGCCTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR TCA 90 bp TCCCAGTTGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTGAGTCTTGGCCTATGTaGACCCAGTTATACATGAAC +
Preference number: 4 (lower is better)
Translates to: SQLPFSTTSTVLESVLSLESWPM*TQLYMN
Trigger: GTTCATGTATAACTGGGTTCACATAGGCCAAGACTC...AAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAACTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR TCA 90 bp TCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTAGATCTTCTTCTGCTTaGCAGCTCTCTCCACGTAGA +
Preference number: 4 (lower is better)
Translates to: SHGINVPMPGRCHSASLARSSSA*QLSPRR
Trigger: TCTACGTGGAGAGAGCTGTCAAGCAGAAGAAGATCT...AGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAATGCCATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR GCA 90 bp TTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTTGTTCTCTGGTCACGATCCAGATGTTaGGATCCCCTTCCATGTCTA +
Preference number: 4 (lower is better)
Translates to: LTFLCPVGVILLAWLVLWSRSRC*DPLPCL
Trigger: TAGACATGGAAGGGGATCGCAACATCTGGATCGTGA...CCAGAGAACAAGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR GCA 90 bp CTTGAATTTGCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTCACGATCCAGATGTTaGGATCCCCTTCCATGTCTA +
Preference number: 4 (lower is better)
Translates to: LEFAFGLDLPTGARNCSDSRSRC*DPLPCL
Trigger: TAGACATGGAAGGGGATCGCAACATCTGGATCGTGA...GTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAAATTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR GCA 90 bp CTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGGCAAACTCACGATCCAGATGTTaGGATCCCCTTCCATGTCTA +
Preference number: 4 (lower is better)
Translates to: LREQLAPFVFCLLLSQANSRSRC*DPLPCL
Trigger: TAGACATGGAAGGGGATCGCAACATCTGGATCGTGA...GTTTGCCTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR GCA 90 bp TATGACTTCCACTCAGACTTCACCACCAGCTTGAGAACGTTGCGGGCAGCAGTCAACCTGATCATGACTTaGCCCATTTTGGATCCAGAA +
Preference number: 4 (lower is better)
Translates to: YDFHSDFTTSLRTLRAAVNLIMT*PILDPE
Trigger: TTCTGGATCCAAAATGGGGCAAGTCATGATCAGGTT...GACTGCTGCCCGCAACGTTCTCAAGCTGGTGGTGAAGTCTGAGTGGAAGTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
CDS-3UTR GCA 90 bp TTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGGCAAACTGTGGTTGGGTTGGCATaGATGATAGTGAGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: FGSNSHLLFSVCCFLRQTVVGLA*MIVRVP
Trigger: AGGAACCCTCACTATCATGCATGCCAACCCAACCAC...AGTTTGCCTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR GCA 90 bp TTGCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGCTTCAGGATGCTGGGTaGCACCTTGAAATCAAGGTT +
Preference number: 4 (lower is better)
Translates to: LPLALTFRQVLGIVPTSKLQDAG*HLEIKV
Trigger: AACCTTGATTTCAAGGTGGCACCCAGCATCCTGAAG...CTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp ACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCTGGGGACACCAACACTaGGTTTTTCTCCTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: TGARNCSDFKGQRQQGTSWGHQH*VFLLFL
Trigger: AAGAAACAGGAGAAAAACCCAGTGTTGGTGTCCCCA...GGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CTAGGCTTGAGGCCTGTTCTGGTTCCAGAACCTGATCATGACTTGCCCCATTTTTTCATCCACAAACTCTaGGGACACCAACACTGGGTT +
Preference number: 4 (lower is better)
Translates to: LGLRPVLVPEPDHDLPHFFIHKL*GHQHWV
Trigger: AACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAA...AAAATGGGGCAAGTCATGATCAGGTTCTGGAACCAGAACAGGCCTCAAGCCTAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
CDS-3UTR CCA 90 bp GTTCAACCCACTACAACTAAGCAGTGCCACACTTTTCTTCAGGTGGGTGTGGCTTTGTCGATGTCCATGTaGGCCAAGTTGCTAAGGTAC +
Preference number: 4 (lower is better)
Translates to: VQPTTTKQCHTFLQVGVALSMSM*AKLLRY
Trigger: GTACCTTAGCAACTTGGCCCACATGGACATCGACAA...AGCCACACCCACCTGAAGAAAAGTGTGGCACTGCTTAGTTGTAGTGGGTTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp CTTGAATTTGCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTGTCGATGTCCATGTaGGCCAAGTTGCTAAGGTAC +
Preference number: 4 (lower is better)
Translates to: LEFAFGLDLPTGARNCSDLSMSM*AKLLRY
Trigger: GTACCTTAGCAACTTGGCCCACATGGACATCGACAA...GTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAAATTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TTGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTGGACTTTTGTCGATGTCCATGTaGGCCAAGTTGCTAAGGTAC +
Preference number: 4 (lower is better)
Translates to: LPFSTTSTVLESVLSLGLLSMSM*AKLLRY
Trigger: GTACCTTAGCAACTTGGCCCACATGGACATCGACAA...AAGTCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CCA 90 bp GAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCGGATGGATGGATAGATaGGTAGATGTGAATCATACA +
Preference number: 4 (lower is better)
Translates to: EMIRSLWRKGLLRETSSSGWMDR*VDVNHT
Trigger: TGTATGATTCACATCTACCCATCTATCCATCCATCC...GGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TCAGTTCCTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCACACAAGAGACAGCAATaGGGGAGTCTCTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SVPSGATRTFCFLSAAFSHKRQQ*GSLSGR
Trigger: TCTTCCAGAGAGACTCCCCCATTGCTGTCTCTTGTG...TGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAGGAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CCA 90 bp GGGCTGAGGTTTAGGCAAGGCCAATTCCTTCCCCTGTCTCATGGCATTAACGTTGAAATCAAGGTTCGGTaGGAGGGAAATGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: GLRFRQGQFLPLSHGINVEIKVR*EGNEDL
Trigger: AAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTC...AACGTTAATGCCATGAGACAGGGGAAGGAATTGGCCTTGCCTAAACCTCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp ACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGAAATCAAGGTTCGGTaGGAGGGAAATGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: TFRQVLGIVPTSKGRGNKEIKVR*EGNEDL
Trigger: AAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTC...CTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR TCA 90 bp TTACGTTCTTTGTCAAAGAAGATATTAAGCTTTGTTCTGACCCCAGGAGAGCTCTCCTCCTCAGAGACCTaGACTCCTCACAGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: LRSLSKKILSFVLTPGELSSSET*TPHRQG
Trigger: TCCCTGCCTGTGAGGAGTTCAGGTCTCTGAGGAGGA...GAGCTCTCCTGGGGTCAGAACAAAGCTTAATATCTTCTTTGACAAAGAACGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR TCA 90 bp TCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTGAGTCTTGGCCTATGTaGACCCAGTTATACATGAAC +
Preference number: 4 (lower is better)
Translates to: SHGINVPMPGRCHSASLAESWPM*TQLYMN
Trigger: GTTCATGTATAACTGGGTTCACATAGGCCAAGACTC...AGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAATGCCATGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR TCA 90 bp TTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTTGTTCTCTGGTGTTTCATTTTTAGGTaGCCTTGGCCCCTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: LTFLCPVGVILLAWLVLWCFIFR*PWPLAE
Trigger: TTCAGCAAGGGGCCAAGGTCACCTAAAAATGAAACA...CCAGAGAACAAGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR GCA 90 bp TCAGTTCCTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCATCTGGATGGAGTTGTTaGACAGGTGCACTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: SVPSGATRTFCFLSAAFSSGWSC*TGALSC
Trigger: ACAACTCAGTGCACCTGTGCAACAACTCCATCCAGA...TGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAGGAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR GCA 90 bp CTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGGCAAACACACTAACTTCTGTGTaGACTGTTACTGCACAAGGC +
Preference number: 4 (lower is better)
Translates to: LREQLAPFVFCLLLSQANTLTSV*TVTAQG
Trigger: GCCTTGTGCAGTAACAGTGCACACAGAAGTTAGTGT...GTTTGCCTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR GCA 90 bp TTACGTTCTTTGTCAAAGAAGATATTAAGCTTTGTTCTGACCCCAGGAGAGCTCCTCTCTGGTGACACCTaGATGTTAGGAGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: LRSLSKKILSFVLTPGELLSGDT*MLGAGP
Trigger: GGGCCCAGCTCCTAACATGCAGGTGTCACCAGAGAG...GAGCTCTCCTGGGGTCAGAACAAAGCTTAATATCTTCTTTGACAAAGAACGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CCA 90 bp CTAGGCTTGAGGCCTGTTCTGGTTCCAGAACCTGATCATGACTTGCCCCATTTTTTATCATCTGATCCTTaGAGAGGAAGCGACAGTCGA +
Preference number: 4 (lower is better)
Translates to: LGLRPVLVPEPDHDLPHFLSSDP*RGSDSR
Trigger: TCGACTGTCGCTTCCTCTCCAAGGATCAGATGATAA...AAAATGGGGCAAGTCATGATCAGGTTCTGGAACCAGAACAGGCCTCAAGCCTAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000474948.5
CDS-3UTR CCA 90 bp TGTGGCTTATTGGATGTTTCATTTTTAGGTGACCTTGGCCCCTTGCTGAAGAAGAGCATCTCCTCCAGGTaGTCCATGCACATGATGCCT +
Preference number: 4 (lower is better)
Translates to: CGLLDVSFLGDLGPLLKKSISSR*SMHMMP
Trigger: AGGCATCATGTGCATGGACCACCTGGAGGAGATGCT...CTTCTTCAGCAAGGGGCCAAGGTCACCTAAAAATGAAACATCCAATAAGCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp TGTGGCTTATTGGATGTTTCATTTTTAGGTGACCTTGGCCCCTTGCTGAAGAAGTGGGCCTGGAACCTCTaGCTAGACCACATGTTGTCT +
Preference number: 4 (lower is better)
Translates to: CGLLDVSFLGDLGPLLKKWAWNL*LDHMLS
Trigger: AGACAACATGTGGTCTAGCCAGAGGTTCCAGGCCCA...CTTCTTCAGCAAGGGGCCAAGGTCACCTAAAAATGAAACATCCAATAAGCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp TTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGACAGATAGGTAGTAGATaGGAGAATGGAATAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LALTFRQVLGIVPTSKGRQIGSR*ENGIAG
Trigger: ACCTGCTATTCCATTCTCCCATCTACTACCTATCTG...TCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR CCA 90 bp CTTGAATTTGCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACGAAATCAAGGTTCGGTaGGAGGGAAATGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: LEFAFGLDLPTGARNCSDEIKVR*EGNEDL
Trigger: AAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTC...GTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAAATTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TTGCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGAAATCAAGGTTCGGTaGGAGGGAAATGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: LPLALTFRQVLGIVPTSKEIKVR*EGNEDL
Trigger: AAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTC...CTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CCA 90 bp GGGCTGAGGTTTAGGCAAGGCCAATTCCTTCCCCTGTCTCATGGCATTAACGTTCTTTTTATTTGGTGTTaGATCCAGGACAAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: GLRFRQGQFLPLSHGINVLFIWC*IQDKGS
Trigger: ACTGCCCTTGTCCTGGATCCAACACCAAATAAAAAG...AACGTTAATGCCATGAGACAGGGGAAGGAATTGGCCTTGCCTAAACCTCAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp ACTGAGTTGCCGTCCTTCATCACCACGGGGTTGCCGTTCACCAGCTTCAGCATCTTGTTTCTTTTTATTTaGTGTTGGATCCAGGACAAG +
Preference number: 4 (lower is better)
Translates to: TELPSFITTGLPFTSFSILFLFI*CWIQDK
Trigger: CTTGTCCTGGATCCAACACCAAATAAAAAGAAACAA...GATGCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGAAGGACGGCAACTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR CCA 90 bp TCAGTTCCTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCATTTTCTGTTTCTCTCTaGCAGACTTGCTGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SVPSGATRTFCFLSAAFSFSVSL*QTCWPP
Trigger: TGGAGGCCAGCAAGTCTGCCAGAGAGAAACAGAAAA...TGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAGGAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR TCA 90 bp TTACGTTCTTTGTCAAAGAAGATATTAAGCTTTGTTCTGACCCCAGGAGAGCTCGCACATCTACAGACCTaGCTCACCCCTGAACATCGC +
Preference number: 4 (lower is better)
Translates to: LRSLSKKILSFVLTPGELAHLQT*LTPEHR
Trigger: GCGATGTTCAGGGGTGAGTCAGGTCTGTAGATGTGC...GAGCTCTCCTGGGGTCAGAACAAAGCTTAATATCTTCTTTGACAAAGAACGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR TCA 90 bp TGTGGCTTATTGGATGTTTCATTTTTAGGTGACCTTGGCCCCTTGCTGAAGAAGAGCTCACCACAGTTTTaGTCTTCCCAGGCTCAGGTA +
Preference number: 4 (lower is better)
Translates to: CGLLDVSFLGDLGPLLKKSSPQF*SSQAQV
Trigger: TACCTGAGCCTGGGAAGATCAAAACTGTGGTGAGCT...CTTCTTCAGCAAGGGGCCAAGGTCACCTAAAAATGAAACATCCAATAAGCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR GCA 90 bp TTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCGTGGGTAGAGTCACTACAACTAAGCAGTaGCACACTTTTCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: LKSRFGGREMKTLAVGRVTTTKQ*HTFLQV
Trigger: CACCTGAAGAAAAGTGTGGCACTGCTTAGTTGTAGT...GACTCTACCCACGGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR GCA 90 bp TTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTTGTTCTCTGGACTACAACTAAGCAGTaGCACACTTTTCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: LTFLCPVGVILLAWLVLWTTTKQ*HTFLQV
Trigger: CACCTGAAGAAAAGTGTGGCACTGCTTAGTTGTAGT...CCAGAGAACAAGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR GCA 90 bp CTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGGCAAACTTGTTTTCTGTCTGCTaGTTTCTCAGGCAAACTCTC +
Preference number: 4 (lower is better)
Translates to: LREQLAPFVFCLLLSQANLFSVC*FLRQTL
Trigger: GAGAGTTTGCCTGAGAAAGCAGCAGACAGAAAACAA...GTTTGCCTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CCA 90 bp ACGTTCTTTGTCAAAGAAGATATTAAGCTTTGTTCTGACCCCAGGAGAGCTCTTAGACCACATGTTGTCTaGCGGAAGCAGTGGATGCCG +
Preference number: 4 (lower is better)
Translates to: TFFVKEDIKLCSDPRRALRPHVV*RKQWMP
Trigger: CGGCATCCACTGCTTCCGCCAGACAACATGTGGTCT...AAGAGCTCTCCTGGGGTCAGAACAAAGCTTAATATCTTCTTTGACAAAGAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CCA 90 bp TCAGTTCCTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGAATGGATGAGTGGATaGCCTGAAGAACAGATAGGT +
Preference number: 4 (lower is better)
Translates to: SVPSGATRTFCFLSAAFSEWMSG*PEEQIG
Trigger: ACCTATCTGTTCTTCAGGCCATCCACTCATCCATTC...TGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAGGAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CCA 90 bp TCCCAGTTGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTCAACTAACAAACGGATaGGAAGACAAGTGTCTAAGT +
Preference number: 4 (lower is better)
Translates to: SQLPFSTTSTVLESVLSLQLTNG*EDKCLS
Trigger: ACTTAGACACTTGTCTTCCCATCCGTTTGTTAGTTG...AAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAACTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CCA 90 bp TTACGTTCTTTGTCAAAGAAGATATTAAGCTTTGTTCTGACCCCAGGAGAGCTCTCGCTGATGGGTCCCTaGATTACAGGACTAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LRSLSKKILSFVLTPGELSLMGP*ITGLGA
Trigger: GGCTCCTAGTCCTGTAATCCAGGGACCCATCAGCGA...GAGCTCTCCTGGGGTCAGAACAAAGCTTAATATCTTCTTTGACAAAGAACGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CCA 90 bp GGTGGGTGTGGCTTATTGGATGTTTCATTTTTAGGTGACCTTGGCCCCTTGCTGCTTTTTATTTGGTGTTaGATCCAGGACAAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: GGCGLLDVSFLGDLGPLLLFIWC*IQDKGS
Trigger: ACTGCCCTTGTCCTGGATCCAACACCAAATAAAAAG...CAGCAAGGGGCCAAGGTCACCTAAAAATGAAACATCCAATAAGCCACACCCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp ATGAGCTCAAAGGCTCCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCTTGTTTCTTTTTATTTaGTGTTGGATCCAGGACAAG +
Preference number: 4 (lower is better)
Translates to: MSSKAPVSQLRSSIRSMTLFLFI*CWIQDK
Trigger: CTTGTCCTGGATCCAACACCAAATAAAAAGAAACAA...GGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCCTTTGAGCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CCA 90 bp TCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTACACTTTTCTTCAGGTaGGTGTGGCTTATTGGATGT +
Preference number: 4 (lower is better)
Translates to: SHGINVPMPGRCHSASLATLFFR*VWLIGC
Trigger: ACATCCAATAAGCCACACCCACCTGAAGAAAAGTGT...AGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAATGCCATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR TCA 90 bp TGTGGCTTATTGGATGTTTCATTTTTAGGTGACCTTGGCCCCTTGCTGAAGAAGTGCCTGAATAGGGTATaGCTTCCACTCAGACTTCAC +
Preference number: 4 (lower is better)
Translates to: CGLLDVSFLGDLGPLLKKCLNRV*LPLRLH
Trigger: GTGAAGTCTGAGTGGAAGTCATACCCTATTCAGGCA...CTTCTTCAGCAAGGGGCCAAGGTCACCTAAAAATGAAACATCCAATAAGCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR TCA 90 bp ACGTTCTTTGTCAAAGAAGATATTAAGCTTTGTTCTGACCCCAGGAGAGCTCTTGTTGCACAGGTGCACTaGGTTGTCCAGGTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: TFFVKEDIKLCSDPRRALVAQVH*VVQVLQ
Trigger: CTGAAGAACCTGGACAACTCAGTGCACCTGTGCAAC...AAGAGCTCTCCTGGGGTCAGAACAAAGCTTAATATCTTCTTTGACAAAGAACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR GCA 90 bp ACGTTCTTTGTCAAAGAAGATATTAAGCTTTGTTCTGACCCCAGGAGAGCTCTTCTGGGAGGTCTGAAGTaGGTGGATCACAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: TFFVKEDIKLCSDPRRALLGGLK*VDHSIL
Trigger: AAGGATGCTGTGATCCACGCACTTCAGACCTCCCAG...AAGAGCTCTCCTGGGGTCAGAACAAAGCTTAATATCTTCTTTGACAAAGAACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR GCA 90 bp TGTGGCTTATTGGATGTTTCATTTTTAGGTGACCTTGGCCCCTTGCTGAAGAAGCTTCAGGATGCTGGGTaGCACCTTGAAATCAAGGTT +
Preference number: 4 (lower is better)
Translates to: CGLLDVSFLGDLGPLLKKLQDAG*HLEIKV
Trigger: AACCTTGATTTCAAGGTGGCACCCAGCATCCTGAAG...CTTCTTCAGCAAGGGGCCAAGGTCACCTAAAAATGAAACATCCAATAAGCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp TTACGTTCTTTGTCAAAGAAGATATTAAGCTTTGTTCTGACCCCAGGAGAGCTCTGGGCCTGGAACCTCTaGCTAGACCACATGTTGTCT +
Preference number: 4 (lower is better)
Translates to: LRSLSKKILSFVLTPGELWAWNL*LDHMLS
Trigger: AGACAACATGTGGTCTAGCCAGAGGTTCCAGGCCCA...GAGCTCTCCTGGGGTCAGAACAAAGCTTAATATCTTCTTTGACAAAGAACGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CCA 90 bp ACGTTCTTTGTCAAAGAAGATATTAAGCTTTGTTCTGACCCCAGGAGAGCTCTTGATTTTCCTCCTTCCTaGAGAGCTGCCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: TFFVKEDIKLCSDPRRALDFPPS*RAASAS
Trigger: GGAAGCAGAGGCAGCTCTCCAGGAAGGAGGAAAATC...AAGAGCTCTCCTGGGGTCAGAACAAAGCTTAATATCTTCTTTGACAAAGAACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CCA 90 bp GGTGGGTGTGGCTTATTGGATGTTTCATTTTTAGGTGACCTTGGCCCCTTGCTGTTCTTCAGGTGGGTGTaGCTTATTGGATGTTTCATT +
Preference number: 4 (lower is better)
Translates to: GGCGLLDVSFLGDLGPLLFFRWV*LIGCFI
Trigger: AATGAAACATCCAATAAGCCACACCCACCTGAAGAA...CAGCAAGGGGCCAAGGTCACCTAAAAATGAAACATCCAATAAGCCACACCCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
3UTR CAA 72 bp TTCTGGTTCCAGAACCTGATCATGACTTGCCCCATTTaGGATCCAGAACCTGACTCTACCTTTTCTGACTCT +
Preference number: 4 (lower is better)
Translates to: FWFQNLIMTCPI*DPEPDSTFSDS
Trigger: AGAGTCAGAAAAGGTAGAGTCAGGTTCTGGATCCAAAATGGGGCAAGTCATGATCAGGTTCTGGAACCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
CDS-3UTR TCA 90 bp TTACGTTCTTTGTCAAAGAAGATATTAAGCTTTGTTCTGACCCCAGGAGAGCTCTGCATTTCTCTCTGGTaGCACCTGCATGTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: LRSLSKKILSFVLTPGELCISLW*HLHVRS
Trigger: GCTCCTAACATGCAGGTGTCACCAGAGAGAAATGCA...GAGCTCTCCTGGGGTCAGAACAAAGCTTAATATCTTCTTTGACAAAGAACGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CCA 90 bp GTTCAACCCACTACAACTAAGCAGTGCCACACTTTTCTTCAGGTGGGTGTGGCTTTGTTTCTTTTTATTTaGTGTTGGATCCAGGACAAG +
Preference number: 4 (lower is better)
Translates to: VQPTTTKQCHTFLQVGVALFLFI*CWIQDK
Trigger: CTTGTCCTGGATCCAACACCAAATAAAAAGAAACAA...AGCCACACCCACCTGAAGAAAAGTGTGGCACTGCTTAGTTGTAGTGGGTTGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CCA 90 bp ACGTTCTTTGTCAAAGAAGATATTAAGCTTTGTTCTGACCCCAGGAGAGCTCTTAAGTGTCTAAGTACCTaGGACAGAAGAATGGATGAG +
Preference number: 4 (lower is better)
Translates to: TFFVKEDIKLCSDPRRALKCLST*DRRMDE
Trigger: CTCATCCATTCTTCTGTCCCAGGTACTTAGACACTT...AAGAGCTCTCCTGGGGTCAGAACAAAGCTTAATATCTTCTTTGACAAAGAACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS TCA 90 bp CGGCGCGCAGGGGCGGGGCTGCCCGCCTGGCATCTGCCGCCTGCGTaGCCCTCCTCGGACTGGGCGGAGGCAGGGCCGGCCCATGGCAGC +
Preference number: 5 (lower is better)
Translates to: RRAGAGLPAWHLPPA*PSSDWAEAGPAHGS
Trigger: GCTGCCATGGGCCGGCCCTGCCTCCGCCCAGTCCGAGGAGGGTCACGCAGGCGGCAGATGCCAGGCGGGCAGCCCCGCCCCTGCGCGCCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426895.9
ENST00000427220.5
CDS GCA 90 bp TCGGAGCGGCGCGCCGAGGGGAAACTGGTGCGTGGCTCGAGCGGCTaGGGCTTCCGCAGCCAGTTGCACACCGCGCCGCCCTCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: SERRAEGKLVRGSSG*GFRSQLHTAPPSWR
Trigger: CCGCCAGGAGGGCGGCGCGGTGTGCAACTGGCTGCGGAAGCCGCAGCCGCTCGAGCCACGCACCAGTTTCCCCTCGGCGCGCCGCTCCGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426895.9
ENST00000427220.5
CDS CCA 90 bp CTCGGACTGGGCGGAGGCAGGGCCGGCCCATGGCAGCCTCCTGGGTaGACGGAACTCGGAGCGGCGCGCCGAGGGGAAACTGGTGCGTGG +
Preference number: 5 (lower is better)
Translates to: LGLGGGRAGPWQPPG*TELGAARRGETGAW
Trigger: CCACGCACCAGTTTCCCCTCGGCGCGCCGCTCCGAGTTCCGTCCACCCAGGAGGCTGCCATGGGCCGGCCCTGCCTCCGCCCAGTCCGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426895.9
ENST00000427220.5
CDS GCA 90 bp GGAAACTGGTGCGTGGCTCGAGCGGCTGCGGCTTCCGCAGCCAGTTaGACACCGCGCCGCCCTCCTGGCGGTACCAGGAGGCCGAGCCCC +
Preference number: 5 (lower is better)
Translates to: GNWCVARAAAASAAS*TPRRPPGGTRRPSP
Trigger: GGGGCTCGGCCTCCTGGTACCGCCAGGAGGGCGGCGCGGTGTGCAACTGGCTGCGGAAGCCGCAGCCGCTCGAGCCACGCACCAGTTTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426895.9
ENST00000427220.5
CDS CCA 90 bp GGGTGGACGGAACTCGGAGCGGCGCGCCGAGGGGAAACTGGTGCGTaGCTCGAGCGGCTGCGGCTTCCGCAGCCAGTTGCACACCGCGCC +
Preference number: 5 (lower is better)
Translates to: GWTELGAARRGETGA*LERLRLPQPVAHRA
Trigger: GGCGCGGTGTGCAACTGGCTGCGGAAGCCGCAGCCGCTCGAGCCACGCACCAGTTTCCCCTCGGCGCGCCGCTCCGAGTTCCGTCCACCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426895.9
ENST00000427220.5
CDS GCA 90 bp TCCTGGGTGGACGGAACTCGGAGCGGCGCGCCGAGGGGAAACTGGTaGGTGGCTCGAGCGGCTGCGGCTTCCGCAGCCAGTTGCACACCG +
Preference number: 5 (lower is better)
Translates to: SWVDGTRSGAPRGNW*VARAAAASAASCTP
Trigger: CGGTGTGCAACTGGCTGCGGAAGCCGCAGCCGCTCGAGCCACGCACCAGTTTCCCCTCGGCGCGCCGCTCCGAGTTCCGTCCACCCAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426895.9
ENST00000427220.5
CDS CCA 90 bp GCCTCCTGGGTGGACGGAACTCGGAGCGGCGCGCCGAGGGGAAACTaGTGCGTGGCTCGAGCGGCTGCGGCTTCCGCAGCCAGTTGCACA +
Preference number: 5 (lower is better)
Translates to: ASWVDGTRSGAPRGN*CVARAAAASAASCT
Trigger: TGTGCAACTGGCTGCGGAAGCCGCAGCCGCTCGAGCCACGCACCAGTTTCCCCTCGGCGCGCCGCTCCGAGTTCCGTCCACCCAGGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426895.9
ENST00000427220.5
CDS GCA 90 bp GTGGTGACGGGCTTCCCCAGAGCCTCGCTGGGTCAGCAGAGGGACTaGTGGGCGGACCCCCATCCGCCGATGACACATCGCCATGGGCTT +
Preference number: 5 (lower is better)
Translates to: VVTGFPRASLGQQRD*WADPHPPMTHRHGL
Trigger: AAGCCCATGGCGATGTGTCATCGGCGGATGGGGGTCCGCCCAGCAGTCCCTCTGCTGACCCAGCGAGGCTCTGGGGAAGCCCGTCACCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426895.9
ENST00000430793.1
ENST00000483051.5
CDS GCA 90 bp CGAGTCCTTGCCTTCCCCAGAGCCTCGCTGGGTCAGCAGAGGGACTaGTGGGCGGACCCCCATCCGCCGATGACACATCGCCATGGGCTT +
Preference number: 5 (lower is better)
Translates to: RVLAFPRASLGQQRD*WADPHPPMTHRHGL
Trigger: AAGCCCATGGCGATGTGTCATCGGCGGATGGGGGTCCGCCCAGCAGTCCCTCTGCTGACCCAGCGAGGCTCTGGGGAAGGCAAGGACTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443148.5
CDS CCA 90 bp GTGACGGGCTTCCCCAGAGCCTCGCTGGGTCAGCAGAGGGACTGCTaGGCGGACCCCCATCCGCCGATGACACATCGCCATGGGCTTCTT +
Preference number: 5 (lower is better)
Translates to: VTGFPRASLGQQRDC*ADPHPPMTHRHGLL
Trigger: AAGAAGCCCATGGCGATGTGTCATCGGCGGATGGGGGTCCGCCCAGCAGTCCCTCTGCTGACCCAGCGAGGCTCTGGGGAAGCCCGTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426895.9
ENST00000430793.1
ENST00000483051.5
CDS-3UTR CAA 90 bp CTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCGGGGCCTCCAGGTCCTaGTCGATGTCCATGTGGGCC +
Preference number: 5 (lower is better)
Translates to: LLRETSSSLGVPASLGAAGASRS*SMSMWA
Trigger: GGCCCACATGGACATCGACAAGGACCTGGAGGCCCC...GGCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp CTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCGCGCAGGGTGTCAGCTaGCACGCCAGCACAGAGCCG +
Preference number: 5 (lower is better)
Translates to: LWRKGLLRETSSSLGVPAAQGVS*HASTEP
Trigger: CGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCGC...GGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp CCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCGCGCAGGGTGTCAGCTaGCACGCCAGCACAGAGCCG +
Preference number: 5 (lower is better)
Translates to: PTSKGRGNKALPAGGLGGAQGVS*HASTEP
Trigger: CGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCGC...GCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp TGCGATCCCCTTCCATGTCTATCTGGGGTACCACGGCCTGCAGCTGCTGCAGGAGGCTTCCGCAGCCAGTaGCACACCGCGCCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: CDPLPCLSGVPRPAAAAGGFRSQ*HTAPPS
Trigger: GGAGGGCGGCGCGGTGTGCAACTGGCTGCGGAAGCC...TCCTGCAGCAGCTGCAGGCCGTGGTACCCCAGATAGACATGGAAGGGGATCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS TCA 90 bp GGCCCAGACCCTATCACGGAGGCAGTGGGAGTCCTCGAGGGTTCCTaGGCAGAACAGCGGGGTAAACGAGCGGGAGGCTTGGGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: GPDPITEAVGVLEGS*AEQRGKRAGGLGKG
Trigger: CCCCTTCCCCAAGCCTCCCGCTCGTTTACCCCGCTGTTCTGCTCAGGAACCCTCGAGGACTCCCACTGCCTCCGTGATAGGGTCTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602338.1
CDS CCA 90 bp GTCCTTGCCTTCCCCAGAGCCTCGCTGGGTCAGCAGAGGGACTGCTaGGCGGACCCCCATCCGCCGATGACACATCGCCATGGGCTTCTT +
Preference number: 5 (lower is better)
Translates to: VLAFPRASLGQQRDC*ADPHPPMTHRHGLL
Trigger: AAGAAGCCCATGGCGATGTGTCATCGGCGGATGGGGGTCCGCCCAGCAGTCCCTCTGCTGACCCAGCGAGGCTCTGGGGAAGGCAAGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443148.5
CDS GCA 90 bp TCTGTTGGATGCAAGGACAGCTGGCAGGATGAGGGCCTGCCTGCCTaGAGTCTGTGTGTGGAGCCTAGCGCTGCTGCGCGAGTCCCCTGC +
Preference number: 5 (lower is better)
Translates to: SVGCKDSWQDEGLPA*SLCVEPSAAARVPC
Trigger: GCAGGGGACTCGCGCAGCAGCGCTAGGCTCCACACACAGACTGCAGGCAGGCAGGCCCTCATCCTGCCAGCTGTCCTTGCATCCAACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492440.1
CDS-3UTR CAA 90 bp CTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCCTCTTCATCACCACGGGGTaGCCGTTCACCAGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: LRETSSSLGVPASLGAALFITTG*PFTSFS
Trigger: GCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGAA...GAGGGCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp TGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGGCGCAGGGTGTCAGCTaGCACGCCAGCACAGAGCCG +
Preference number: 5 (lower is better)
Translates to: CSDFKGQRQQGTSSWGPRAQGVS*HASTEP
Trigger: CGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCGC...CCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GCCTTAGTGCCCACCAGCTTGCTGTGCTGTCGTCTGAGGACCTGGCCCTGGTGTCCACACCCGAGGCCCTaGTGCCCCTTATCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: ALVPTSLLCCRLRTWPWCPHPRP*CPLSWH
Trigger: GTGCCAGGATAAGGGGCACAAGGGCCTCGGGTGTGG...ACACCAGGGCCAGGTCCTCAGACGACAGCACAGCAAGCTGGTGGGCACTAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR CAA 90 bp AAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAAGAGTCCTCAAGGCCTaGCCTGTGGTCGACAGGGCC +
Preference number: 5 (lower is better)
Translates to: KGLLRETSSSLGVPASLGRVLKA*PVVDRA
Trigger: GGCCCTGTCGACCACAGGCAAGGCCTTGAGGACTCT...TCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTAGAGTCCTCAAGGCCTaGCCTGTGGTCGACAGGGCC +
Preference number: 5 (lower is better)
Translates to: EEGASEGDQLFPWGASQPRVLKA*PVVDRA
Trigger: GGCCCTGTCGACCACAGGCAAGGCCTTGAGGACTCT...AGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS GCA 90 bp GCCTTGGAGGATCCTCGCCAGAGGACCGGGAAACCTGCAGAAAGATaGGGAATAGGGGCGGGGTACACTGAGGCTGGGCCTAGGGTCTCG +
Preference number: 5 (lower is better)
Translates to: ALEDPRQRTGKPAER*GIGAGYTEAGPRVS
Trigger: CGAGACCCTAGGCCCAGCCTCAGTGTACCCCGCCCCTATTCCGCATCTTTCTGCAGGTTTCCCGGTCCTCTGGCGAGGATCCTCCAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS CCA 90 bp CACCCATCGCTGAGCTATCCAGATCCTTCTGGGGTGGCAGCAGGGTaGGGCCTGAGCGATGGACCATCTTCTTCTCCACCCAGCCCCTCC +
Preference number: 5 (lower is better)
Translates to: HPSLSYPDPSGVAAG*GLSDGPSSSPPSPS
Trigger: GGAGGGGCTGGGTGGAGAAGAAGATGGTCCATCGCTCAGGCCCCACCCTGCTGCCACCCCAGAAGGATCTGGATAGCTCAGCGATGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000414814.5
ENST00000417065.5
ENST00000418745.5
ENST00000419081.5
ENST00000422738.5
ENST00000426827.5
ENST00000426895.9
ENST00000427220.5
ENST00000430390.5
ENST00000430718.5
ENST00000431204.5
ENST00000438596.5
ENST00000439814.5
ENST00000452597.5
ENST00000459758.5
CDS-3UTR CAA 90 bp CTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCCTCTCCATGTGGGCCAAGTaGCTAAGGTACTCCTCGCAC +
Preference number: 5 (lower is better)
Translates to: LRETSSSLGVPASLGAALSMWAK*LRYSSH
Trigger: GTGCGAGGAGTACCTTAGCAACTTGGCCCACATGGA...GAGGGCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp ACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCACAGGGGCCTCCAGGTCCTaGTCGATGTCCATGTGGGCC +
Preference number: 5 (lower is better)
Translates to: TSKGRGNKALPAGGLGGTGASRS*SMSMWA
Trigger: GGCCCACATGGACATCGACAAGGACCTGGAGGCCCC...TGTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp TGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGGGGGCCTCCAGGTCCTaGTCGATGTCCATGTGGGCC +
Preference number: 5 (lower is better)
Translates to: CSDFKGQRQQGTSSWGPRGASRS*SMSMWA
Trigger: GGCCCACATGGACATCGACAAGGACCTGGAGGCCCC...CCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp CTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCTTAGTGCCCACCAGCTaGCTGTGCTGTCGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: LLRETSSSLGVPASLGAALVPTS*LCCRLR
Trigger: CCTCAGACGACAGCACAGCAAGCTGGTGGGCACTAA...GGCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS TCA 90 bp ACCACGGCCTGCAGCTGCTGCAGGATGTCCTCACAGCGCTGGACCTaGGTGTCGAGGTGCCTGAGTTCTGCCCCTTCGCATCAGAGCATG +
Preference number: 5 (lower is better)
Translates to: TTACSCCRMSSQRWT*VSRCLSSAPSHQSM
Trigger: CATGCTCTGATGCGAAGGGGCAGAACTCAGGCACCTCGACACTCAGGTCCAGCGCTGTGAGGACATCCTGCAGCAGCTGCAGGCCGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430390.5
CDS TCA 90 bp ACCACGGCCTGCAGCTGCTGCAGGATGTCCTCACAGCGCTGGACCTaGGTGTCGAGGTGCCTGAGTTCTGCCCCTTCGCTGTGGGGAAAT +
Preference number: 5 (lower is better)
Translates to: TTACSCCRMSSQRWT*VSRCLSSAPSLWGN
Trigger: ATTTCCCCACAGCGAAGGGGCAGAACTCAGGCACCTCGACACTCAGGTCCAGCGCTGTGAGGACATCCTGCAGCAGCTGCAGGCCGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482269.1
ENST00000492440.1
CDS GCA 90 bp GACCTGAACTCCTCACAGGCAGGGACGGACCATGTCTTCTTAGTCTaGCCTCTCCAGGGTGCTCGGCTACATGCCAGGCCCATGGGAGGG +
Preference number: 5 (lower is better)
Translates to: DLNSSQAGTDHVFLV*PLQGARLHARPMGG
Trigger: CCCTCCCATGGGCCTGGCATGTAGCCGAGCACCCTGGAGAGGGCAGACTAAGAAGACATGGTCCGTCCCTGCCTGTGAGGAGTTCAGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000455274.5
ENST00000473661.5
ENST00000496526.5
CDS GCA 90 bp GCCTGCAGTCTGTGTGTGGAGCCTAGCGCTGCTGCGCGAGTCCCCTaGACTGTAATCGCCTGTTTGCTTGCCAGCTCCCCAACTAGGCAG +
Preference number: 5 (lower is better)
Translates to: ACSLCVEPSAAARVP*TVIACLLASSPTRQ
Trigger: CTGCCTAGTTGGGGAGCTGGCAAGCAAACAGGCGATTACAGTGCAGGGGACTCGCGCAGCAGCGCTAGGCTCCACACACAGACTGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492440.1
CDS-3UTR CAA 90 bp CCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCCCCTTCGTGGACCACTaGGTAGTAGCGCTGGAGGAA +
Preference number: 5 (lower is better)
Translates to: PTSKGRGNKALPAGGLGGPFVDH*VVALEE
Trigger: TTCCTCCAGCGCTACTACCAAGTGGTCCACGAAGGG...GCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp TTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGCCTCGTCCGCGGGACTaGGCTCCTGGCTTCACGATC +
Preference number: 5 (lower is better)
Translates to: LFRLQRAEATRHFQLGASPRPRD*APGFTI
Trigger: GATCGTGAAGCCAGGAGCCAAGTCCCGCGGACGAGG...CGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GATGGTGAAGCCCTCTACCAGGAGCCGGATGCCCACATATTGAGGCACCTCCACCCTCGTCCGCGGGACTaGGCTCCTGGCTTCACGATC +
Preference number: 5 (lower is better)
Translates to: DGEALYQEPDAHILRHLHPRPRD*APGFTI
Trigger: GATCGTGAAGCCAGGAGCCAAGTCCCGCGGACGAGG...GTGGAGGTGCCTCAATATGTGGGCATCCGGCTCCTGGTAGAGGGCTTCACCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR CAA 90 bp TTTGGTGTTGGATCCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCCTGCGCAGGGTGTCAGCTaGCACGCCAGCACAGAGCCG +
Preference number: 5 (lower is better)
Translates to: FGVGSRTRAVGNRSRGFPAQGVS*HASTEP
Trigger: CGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCGC...AGGGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAACACCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GAGCTCAAAGGCTCCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACGCGCAGGGTGTCAGCTaGCACGCCAGCACAGAGCCG +
Preference number: 5 (lower is better)
Translates to: ELKGSCVTVAVQHPVNDHAQGVS*HASTEP
Trigger: CGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCGC...GTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCCTTTGAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GGCTTCCCTAGCTTCATATCCCCCAGGCCCCTGCGCCTCTGGAATGTACCAACACCACACCCGAGGCCCTaGTGCCCCTTATCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: GFPSFISPRPLRLWNVPTPHPRP*CPLSWH
Trigger: GTGCCAGGATAAGGGGCACAAGGGCCTCGGGTGTGG...TGTTGGTACATTCCAGAGGCGCAGGGGCCTGGGGGATATGAAGCTAGGGAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR CAA 90 bp CAAAGCTGGCCTTCCGACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGAAGAGTCCTCAAGGCCTaGCCTGTGGTCGACAGGGCC +
Preference number: 5 (lower is better)
Translates to: QSWPSDTARCPGRSEVRGRVLKA*PVVDRA
Trigger: GGCCCTGTCGACCACAGGCAAGGCCTTGAGGACTCT...TCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAGCTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CAA 90 bp TTCACCACCAGCTTGAGAACGTTGCGGGCAGCAGTCAGCCAGAAGTCCTCTGCTCTCCACCCCAGCGTCTaGTCGTCCTCGCAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: FTTSLRTLRAAVSQKSSALHPSV*SSSQPL
Trigger: CAGCGGCTGCGAGGACGACAAGACGCTGGGGTGGAG...AGCAGAGGACTTCTGGCTGACTGCTGCCCGCAACGTTCTCAAGCTGGTGGTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR CAA 90 bp CTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCCTTCAGGGAGAAGGGTaGCCGTCCTTCATCACCACG +
Preference number: 5 (lower is better)
Translates to: LWRKGLLRETSSSLGVPALQGEG*PSFITT
Trigger: CGTGGTGATGAAGGACGGCAACCCTTCTCCCTGAAG...GGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS CCA 90 bp GTCCTGGAAGCAGCCCTGGGCCACCCTGCACTATTCAACTTGAGATaGGGCCCTACTGGGAAGGACAAAAAGGACAGAGGCCTGGGCCCC +
Preference number: 5 (lower is better)
Translates to: VLEAALGHPALFNLR*GPTGKDKKDRGLGP
Trigger: GGGGCCCAGGCCTCTGTCCTTTTTGTCCTTCCCAGTAGGGCCCCATCTCAAGTTGAATAGTGCAGGGTGGCCCAGGGCTGCTTCCAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496526.5
CDS-3UTR CAA 90 bp CTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCCCTCTCTATGAAGGCTTTTTaGTCATCCTCAGCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: LRETSSSLGVPASLGAALSMKAF*SSSAPR
Trigger: CCTGGGGGCTGAGGATGACAAAAAAGCCTTCATAGA...GAGGGCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000443148.5
CDS-3UTR CAA 90 bp GTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAACCAGCTTGAGAACGTaGCGGGCAGCAGTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: VPTSKGRGNKALPAGGLGTSLRT*RAAVSQ
Trigger: CTGGCTGACTGCTGCCCGCAACGTTCTCAAGCTGGT...TCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GGCTCCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACGCGCAGGGTGACTTCACCACCAGCTaGAGAACGTTGCGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: GSCVTVAVQHPVNDHAQGDFTTS*RTLRAA
Trigger: TGCTGCCCGCAACGTTCTCAAGCTGGTGGTGAAGTC...ACCCTGCGCGTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
CDS-3UTR CAA 90 bp ATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGCCTCGTCCGCGGGACTaGGCTCCTGGCTTCACGATC +
Preference number: 5 (lower is better)
Translates to: IRSLWRKGLLRETSSSLGPRPRD*APGFTI
Trigger: GATCGTGAAGCCAGGAGCCAAGTCCCGCGGACGAGG...CCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp AGTGCTCGGCAGTTCTGGCAATATGTCCCTGCGTCGACTCACTGCCACGTGATCCCTCGTCCGCGGGACTaGGCTCCTGGCTTCACGATC +
Preference number: 5 (lower is better)
Translates to: SARQFWQYVPASTHCHVIPRPRD*APGFTI
Trigger: GATCGTGAAGCCAGGAGCCAAGTCCCGCGGACGAGG...GATCACGTGGCAGTGAGTCGACGCAGGGACATATTGCCAGAACTGCCGAGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp TCCAGATGTTGCGATCCCCTTCCATGTCTATCTGGGGTACCACGGCCTGCAGCTCCTCGTCCGCGGGACTaGGCTCCTGGCTTCACGATC +
Preference number: 5 (lower is better)
Translates to: SRCCDPLPCLSGVPRPAAPRPRD*APGFTI
Trigger: GATCGTGAAGCCAGGAGCCAAGTCCCGCGGACGAGG...AGCTGCAGGCCGTGGTACCCCAGATAGACATGGAAGGGGATCGCAACATCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000430390.5
CDS-3UTR CAA 90 bp ATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCCCTCGTCCGCGGGACTaGGCTCCTGGCTTCACGATC +
Preference number: 5 (lower is better)
Translates to: IVPTSKGRGNKALPAGGLPRPRD*APGFTI
Trigger: GATCGTGAAGCCAGGAGCCAAGTCCCGCGGACGAGG...GAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGCCTCGTCCGCGGGACTaGGCTCCTGGCTTCACGATC +
Preference number: 5 (lower is better)
Translates to: DQKSVEEGASEGDQLFPWPRPRD*APGFTI
Trigger: GATCGTGAAGCCAGGAGCCAAGTCCCGCGGACGAGG...CCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGTGGCTAGACCACATGTaGTCTGGCGGAAGCAGTGGA +
Preference number: 5 (lower is better)
Translates to: VEEGASEGDQLFPWGASQWLDHM*SGGSSG
Trigger: TCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCA...CTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCGCGCAGGGTGTCAGCTaGCACGCCAGCACAGAGCCG +
Preference number: 5 (lower is better)
Translates to: EMIRSLWRKGLLRETSSSAQGVS*HASTEP
Trigger: CGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCGC...GGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp AGGGGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGCGCAGGGTGTCAGCTaGCACGCCAGCACAGAGCCG +
Preference number: 5 (lower is better)
Translates to: RGEEGDDQKSVEEGASEGAQGVS*HASTEP
Trigger: CGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCGC...TCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGATGCACCTGGGAGTCTaGGCCTATGTGAACCCAGTT +
Preference number: 5 (lower is better)
Translates to: EGASEGDQLFPWGASQPGMHLGV*AYVNPV
Trigger: AACTGGGTTCACATAGGCCAAGACTCCCAGGTGCAT...CCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GGCTCCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACGCGCAGGGTGCCTCAGCCCTGGGTTaGTCACAGTCTGGCCTTGAA +
Preference number: 5 (lower is better)
Translates to: GSCVTVAVQHPVNDHAQGASALG*SQSGLE
Trigger: TTCAAGGCCAGACTGTGACAAACCCAGGGCTGAGGC...ACCCTGCGCGTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACGCGCAGGGTGTCAGCTCCGGATGCCCACATATaGAGGCACCTCCACAGCAGG +
Preference number: 5 (lower is better)
Translates to: VSQLRSSIRSMTTRRVSAPDAHI*RHLHSR
Trigger: CCTGCTGTGGAGGTGCCTCAATATGTGGGCATCCGG...AGCTGACACCCTGCGCGTGGTCATTGACCGGATGCTGGACCGCAACTGTGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR CAA 90 bp CTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCATCGCCATGGGCTTCTaGATGGTGAAGCCCTCTACC +
Preference number: 5 (lower is better)
Translates to: LWRKGLLRETSSSLGVPAIAMGF*MVKPST
Trigger: GGTAGAGGGCTTCACCATCAAGAAGCCCATGGCGAT...GGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS GCA 90 bp AACCTAGGCTCGAGCCTTGTCCTCCGTTCCAAGCCCCGCCCCGTTTaGTATTGCCTTGGAAACCATTCCCTGGGCACCATCAGACCGCTC +
Preference number: 5 (lower is better)
Translates to: NLGSSLVLRSKPRPV*YCLGNHSLGTIRPL
Trigger: GAGCGGTCTGATGGTGCCCAGGGAATGGTTTCCAAGGCAATAGCAAACGGGGCGGGGCTTGGAACGGAGGACAAGGCTCGAGCCTAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419081.5
CDS-3UTR CAA 90 bp ACCACCAGCTTGAGAACGTTGCGGGCAGCAGTCAGCCAGAAGTCCTCTGCTCCCGACTTCACCACCAGCTaGAGAACGTTGCGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: TTSLRTLRAAVSQKSSAPDFTTS*RTLRAA
Trigger: TGCTGCCCGCAACGTTCTCAAGCTGGTGGTGAAGTC...GGGAGCAGAGGACTTCTGGCTGACTGCTGCCCGCAACGTTCTCAAGCTGGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
CDS-3UTR CAA 90 bp GAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCGGGGCCTCCAGGTCCTaGTCGATGTCCATGTGGGCC +
Preference number: 5 (lower is better)
Translates to: EMIRSLWRKGLLRETSSSGASRS*SMSMWA
Trigger: GGCCCACATGGACATCGACAAGGACCTGGAGGCCCC...GGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp AAGTGCGTGGATCACAGCATCCTTCATGCCAGGCACGATGATGGTGGACCAAGCCCTCGTCCGCGGGACTaGGCTCCTGGCTTCACGATC +
Preference number: 5 (lower is better)
Translates to: KCVDHSILHARHDDGGPSPRPRD*APGFTI
Trigger: GATCGTGAAGCCAGGAGCCAAGTCCCGCGGACGAGG...GCTTGGTCCACCATCATCGTGCCTGGCATGAAGGATGCTGTGATCCACGCACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CAA 90 bp TCTGTCCTTAGGTGGGAATTCTGGGCCTCGCTGCACGGAGGAGCTGCTGATGGCTTCATCACCACGGGGTaGCCGTTCACCAGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: SVLRWEFWASLHGGAADGFITTG*PFTSFS
Trigger: GCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGAA...GCCATCAGCAGCTCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp GTTGCGATCCCCTTCCATGTCTATCTGGGGTACCACGGCCTGCAGCTGCTGCAGTTCATCACCACGGGGTaGCCGTTCACCAGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: VAIPFHVYLGYHGLQLLQFITTG*PFTSFS
Trigger: GCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGAA...CTGCAGCAGCTGCAGGCCGTGGTACCCCAGATAGACATGGAAGGGGATCGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000430390.5
CDS-3UTR CAA 90 bp ACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCACATTCATCACCACGGGGTaGCCGTTCACCAGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: TSKGRGNKALPAGGLGGTFITTG*PFTSFS
Trigger: GCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGAA...TGTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp CCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACGCGCAGGGTGTCATTCATCACCACGGGGTaGCCGTTCACCAGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: PVSQLRSSIRSMTTRRVSFITTG*PFTSFS
Trigger: GCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGAA...TGACACCCTGCGCGTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GGAAGCCCCATGTCTGTCCTTAGGTGGGAATTCTGGGCCTCGCTGCACGGAGGATTCTGCACCACCCACTaGCCGTCCTTCATCACCACG +
Preference number: 5 (lower is better)
Translates to: GSPMSVLRWEFWASLHGGFCTTH*PSFITT
Trigger: CGTGGTGATGAAGGACGGCAAGTGGGTGGTGCAGAA...TCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGACATGGGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp GCCGTCCTTCATCACCACGGGGTTGCCGTTCACCAGCTTCAGCATCTCCTCCAGTTCTGCACCACCCACTaGCCGTCCTTCATCACCACG +
Preference number: 5 (lower is better)
Translates to: AVLHHHGVAVHQLQHLLQFCTTH*PSFITT
Trigger: CGTGGTGATGAAGGACGGCAAGTGGGTGGTGCAGAA...CTGGAGGAGATGCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGAAGGACGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430390.5
CDS-3UTR CAA 90 bp GATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGAGAGTCCTCAAGGCCTaGCCTGTGGTCGACAGGGCC +
Preference number: 5 (lower is better)
Translates to: DQKSVEEGASEGDQLFPWRVLKA*PVVDRA
Trigger: GGCCCTGTCGACCACAGGCAAGGCCTTGAGGACTCT...CCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp CCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCCTAGCTTCATATCCCCGAGGCCCACCTTTCTaGGCTTCAGGATGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: PGQGQWGIEAGASLASYPRGPPF*ASGCWV
Trigger: CACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTCG...GGGATATGAAGCTAGGGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTGGGAGCTGCAATTTGCCTTTGGCCTaGACCTTCCGACAGGTGCTA +
Preference number: 5 (lower is better)
Translates to: ASEGDQLFPWGASQPGSCNLPLA*TFRQVL
Trigger: TAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAAATT...GCAGCTCCCAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR CAA 90 bp GTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACGCGCAGGGTGTCAGCTGCCTCAGCCCTGGGTTaGTCACAGTCTGGCCTTGAA +
Preference number: 5 (lower is better)
Translates to: VSQLRSSIRSMTTRRVSAASALG*SQSGLE
Trigger: TTCAAGGCCAGACTGTGACAAACCCAGGGCTGAGGC...AGCTGACACCCTGCGCGTGGTCATTGACCGGATGCTGGACCGCAACTGTGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CAA 90 bp AGTGCTCGGCAGTTCTGGCAATATGTCCCTGCGTCGACTCACTGCCACGTGATCGATGGCCTCAGGCTCTaGCTGTGGACCCTGGGGTAC +
Preference number: 5 (lower is better)
Translates to: SARQFWQYVPASTHCHVIDGLRL*LWTLGY
Trigger: GTACCCCAGGGTCCACAGCAAGAGCCTGAGGCCATC...GATCACGTGGCAGTGAGTCGACGCAGGGACATATTGCCAGAACTGCCGAGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp GGTGGGTGTGGCTTATTGGATGTTTCATTTTTAGGTGACCTTGGCCCCTTGCTGGGCTTCCGCAGCCAGTaGCACACCGCGCCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: GGCGLLDVSFLGDLGPLLGFRSQ*HTAPPS
Trigger: GGAGGGCGGCGCGGTGTGCAACTGGCTGCGGAAGCC...CAGCAAGGGGCCAAGGTCACCTAAAAATGAAACATCCAATAAGCCACACCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS TCA 90 bp GCTGCAGGATGTCCTCACAGCGCTGGACCTGAGTGTCGAGGTGCCTaGGTTCTGCCCCTTCGCTGTGGGGAAATGATAGAACTTGGGCAG +
Preference number: 5 (lower is better)
Translates to: AAGCPHSAGPECRGA*VLPLRCGEMIELGQ
Trigger: CTGCCCAAGTTCTATCATTTCCCCACAGCGAAGGGGCAGAACTCAGGCACCTCGACACTCAGGTCCAGCGCTGTGAGGACATCCTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482269.1
ENST00000492440.1
CDS TCA 90 bp GGCAAGTCCTGGAAGCAGCCCTGGGCCACCCTGCACTATTCAACTTaGGATGGGGCCCTACTGGGAAGGACAAAAAGGACAGAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GKSWKQPWATLHYST*DGALLGRTKRTEAW
Trigger: CCAGGCCTCTGTCCTTTTTGTCCTTCCCAGTAGGGCCCCATCTCAAGTTGAATAGTGCAGGGTGGCCCAGGGCTGCTTCCAGGACTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496526.5
CDS CCA 90 bp TCAGTGGTGTCACTGTCACCCATCGCTGAGCTATCCAGATCCTTCTaGGGTGGCAGCAGGGTGGGGCCTGAGCGATGGACCATCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SVVSLSPIAELSRSF*GGSRVGPERWTIFF
Trigger: GAAGAAGATGGTCCATCGCTCAGGCCCCACCCTGCTGCCACCCCAGAAGGATCTGGATAGCTCAGCGATGGGTGACAGTGACACCACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000414814.5
ENST00000417065.5
ENST00000418745.5
ENST00000419081.5
ENST00000422738.5
ENST00000426827.5
ENST00000426895.9
ENST00000427220.5
ENST00000430390.5
ENST00000430718.5
ENST00000431204.5
ENST00000438596.5
ENST00000439814.5
ENST00000452597.5
ENST00000459758.5
CDS-3UTR CAA 90 bp CCAGATGTTGCGATCCCCTTCCATGTCTATCTGGGGTACCACGGCCTGCAGCTGGACTTCACCACCAGCTaGAGAACGTTGCGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: PDVAIPFHVYLGYHGLQLDFTTS*RTLRAA
Trigger: TGCTGCCCGCAACGTTCTCAAGCTGGTGGTGAAGTC...CAGCTGCAGGCCGTGGTACCCCAGATAGACATGGAAGGGGATCGCAACATCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR CAA 90 bp CTCAAAGCTGGCCTTCCGACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGTCCATGTGGGCCAAGTaGCTAAGGTACTCCTCGCAC +
Preference number: 5 (lower is better)
Translates to: LKAGLPTLHGVLGGLKCVSMWAK*LRYSSH
Trigger: GTGCGAGGAGTACCTTAGCAACTTGGCCCACATGGA...CACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAGCTTTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGGGGGCCTCCAGGTCCTaGTCGATGTCCATGTGGGCC +
Preference number: 5 (lower is better)
Translates to: AFGLDLPTGARNCSDFKGGASRS*SMSMWA
Trigger: GGCCCACATGGACATCGACAAGGACCTGGAGGCCCC...CCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGCCTTTCACGATCCAGATGTaGCGATCCCCTTCCATGTCT +
Preference number: 5 (lower is better)
Translates to: EEGASEGDQLFPWGASQPFTIQM*RSPSMS
Trigger: AGACATGGAAGGGGATCGCAACATCTGGATCGTGAA...AGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGGTGCCAGCCAGTTCACGATCCAGATGTaGCGATCCCCTTCCATGTCT +
Preference number: 5 (lower is better)
Translates to: VEEGASEGDQLFPWGASQFTIQM*RSPSMS
Trigger: AGACATGGAAGGGGATCGCAACATCTGGATCGTGAA...CTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp CCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACGCGCAGGGTGTCATGGCTAGACCACATGTaGTCTGGCGGAAGCAGTGGA +
Preference number: 5 (lower is better)
Translates to: PVSQLRSSIRSMTTRRVSWLDHM*SGGSSG
Trigger: TCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCA...TGACACCCTGCGCGTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CAA 90 bp AGTTTCTTCATCTGTAAAGTGAAGGCTCACGCTCCCCACCCCTGGATCGGAGATGCGCAGGGTGTCAGCTaGCACGCCAGCACAGAGCCG +
Preference number: 5 (lower is better)
Translates to: SFFICKVKAHAPHPWIGDAQGVS*HASTEP
Trigger: CGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCGC...ATCTCCGATCCAGGGGTGGGGAGCGTGAGCCTTCACTTTACAGATGAAGAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp CACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGCATGAGTTCTCCAGGTGCGCTCCTGTGTCACAGTaGCGGTCCAGCATCCGGTCA +
Preference number: 5 (lower is better)
Translates to: HMLSGGSSGCRWHEFSRCAPVSQ*RSSIRS
Trigger: TGACCGGATGCTGGACCGCAACTGTGACACAGGAGC...GCACCTGGAGAACTCATGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CAA 90 bp ATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGCTCCTGTGTCACAGTaGCGGTCCAGCATCCGGTCA +
Preference number: 5 (lower is better)
Translates to: IVPTSKGRGNKALPAGGLAPVSQ*RSSIRS
Trigger: TGACCGGATGCTGGACCGCAACTGTGACACAGGAGC...GAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GGGGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGGCTCCTGTGTCACAGTaGCGGTCCAGCATCCGGTCA +
Preference number: 5 (lower is better)
Translates to: GEKREMIRSLWRKGLLREAPVSQ*RSSIRS
Trigger: TGACCGGATGCTGGACCGCAACTGTGACACAGGAGC...CTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GGAAGCCCCATGTCTGTCCTTAGGTGGGAATTCTGGGCCTCGCTGCACGGAGGACAGGCAGTGGTTGGGTaGGCATGCATGATAGTGAGG +
Preference number: 5 (lower is better)
Translates to: GSPMSVLRWEFWASLHGGQAVVG*ACMIVR
Trigger: CCTCACTATCATGCATGCCAACCCAACCACTGCCTG...TCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGACATGGGGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR CAA 90 bp ACCACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGCATGAGTTCTCCAGGTAGAGTCCTCAAGGCCTaGCCTGTGGTCGACAGGGCC +
Preference number: 5 (lower is better)
Translates to: TTCCLAEAVDADGMSSPGRVLKA*PVVDRA
Trigger: GGCCCTGTCGACCACAGGCAAGGCCTTGAGGACTCT...ACCTGGAGAACTCATGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CAA 90 bp TCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGGCCTTGAATTTGCCTTaGGCCTTGACCTTCCGACAG +
Preference number: 5 (lower is better)
Translates to: SDFKGQRQQGTSSWGPRRALNLP*ALTFRQ
Trigger: CTGTCGGAAGGTCAAGGCCAAAGGCAAATTCAAGGC...CCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp AATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTGATGGCCTCAGGCTCTaGCTGTGGACCCTGGGGTAC +
Preference number: 5 (lower is better)
Translates to: NCSDFKGQRQQGTSSWGPDGLRL*LWTLGY
Trigger: GTACCCCAGGGTCCACAGCAAGAGCCTGAGGCCATC...AGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR CAA 90 bp GAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCCCGGATGCCCACATATaGAGGCACCTCCACAGCAGG +
Preference number: 5 (lower is better)
Translates to: EGDDQKSVEEGASEGDQLPDAHI*RHLHSR
Trigger: CCTGCTGTGGAGGTGCCTCAATATGTGGGCATCCGG...GAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GGGGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGCCGGATGCCCACATATaGAGGCACCTCCACAGCAGG +
Preference number: 5 (lower is better)
Translates to: GEKREMIRSLWRKGLLREPDAHI*RHLHSR
Trigger: CCTGCTGTGGAGGTGCCTCAATATGTGGGCATCCGG...CTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp ACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCACAATCGCCATGGGCTTCTaGATGGTGAAGCCCTCTACC +
Preference number: 5 (lower is better)
Translates to: TSKGRGNKALPAGGLGGTIAMGF*MVKPST
Trigger: GGTAGAGGGCTTCACCATCAAGAAGCCCATGGCGAT...TGTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430793.1
ENST00000473661.5
CDS GCA 90 bp AAAGGGTCTATCCCTAAGCACCTGCCCACAGCCCAAAGTCCCAGCTaGAGGGGACTCACTGGACCACTTGGTAGTAGCGCTGGAGGAAGA +
Preference number: 5 (lower is better)
Translates to: KGSIPKHLPTAQSPS*RGLTGPLGSSAGGR
Trigger: TCTTCCTCCAGCGCTACTACCAAGTGGTCCAGTGAGTCCCCTGCAGCTGGGACTTTGGGCTGTGGGCAGGTGCTTAGGGATAGACCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602338.1
CDS CCA 90 bp TGCCAAGAACCAAGAAAAGTGGCCCAGACCCTATCACGGAGGCAGTaGGAGTCCTCGAGGGTTCCTGAGCAGAACAGCGGGGTAAACGAG +
Preference number: 5 (lower is better)
Translates to: CQEPRKVAQTLSRRQ*ESSRVPEQNSGVNE
Trigger: CTCGTTTACCCCGCTGTTCTGCTCAGGAACCCTCGAGGACTCCCACTGCCTCCGTGATAGGGTCTGGGCCACTTTTCTTGGTTCTTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602338.1
CDS-3UTR CAA 90 bp GGGGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGGACTTCACCACCAGCTaGAGAACGTTGCGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: GEKREMIRSLWRKGLLREDFTTS*RTLRAA
Trigger: TGCTGCCCGCAACGTTCTCAAGCTGGTGGTGAAGTC...CTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGACTTCACCACCAGCTaGAGAACGTTGCGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: DQKSVEEGASEGDQLFPWDFTTS*RTLRAA
Trigger: TGCTGCCCGCAACGTTCTCAAGCTGGTGGTGAAGTC...CCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp TCCCTAGCTTCATATCCCCCAGGCCCCTGCGCCTCTGGAATGTACCAACAAGGGTCCATGTGGGCCAAGTaGCTAAGGTACTCCTCGCAC +
Preference number: 5 (lower is better)
Translates to: SLASYPPGPCASGMYQQGSMWAK*LRYSSH
Trigger: GTGCGAGGAGTACCTTAGCAACTTGGCCCACATGGA...CCCTTGTTGGTACATTCCAGAGGCGCAGGGGCCTGGGGGATATGAAGCTAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR CAA 90 bp AGTGCTCGGCAGTTCTGGCAATATGTCCCTGCGTCGACTCACTGCCACGTGATCCCCTTCGTGGACCACTaGGTAGTAGCGCTGGAGGAA +
Preference number: 5 (lower is better)
Translates to: SARQFWQYVPASTHCHVIPFVDH*VVALEE
Trigger: TTCCTCCAGCGCTACTACCAAGTGGTCCACGAAGGG...GATCACGTGGCAGTGAGTCGACGCAGGGACATATTGCCAGAACTGCCGAGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp GATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGTTCATCACCACGGGGTaGCCGTTCACCAGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: DQKSVEEGASEGDQLFPWFITTG*PFTSFS
Trigger: GCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGAA...CCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp ACTGAGTTGCCGTCCTTCATCACCACGGGGTTGCCGTTCACCAGCTTCAGCATCTTCATCACCACGGGGTaGCCGTTCACCAGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: TELPSFITTGLPFTSFSIFITTG*PFTSFS
Trigger: GCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGAA...GATGCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGAAGGACGGCAACTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR CAA 90 bp GAACCTCTGGCTAGACCACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGCATTCATCACCACGGGGTaGCCGTTCACCAGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: EPLARPHVVWRKQWMPMAFITTG*PFTSFS
Trigger: GCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGAA...TGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCAGAGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCATCACCACGGGGTaGCCGTTCACCAGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: EGDDQKSVEEGASEGDQLFITTG*PFTSFS
Trigger: GCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGAA...GAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GCTGGCCTTCCGACACTGCACGGTGTCCTGGGAGGTCTGAAGTGCGTGGATCACTTCTGGATGGAGTTGTaGCACAGGTGCACTGAGTTG +
Preference number: 5 (lower is better)
Translates to: AGLPTLHGVLGGLKCVDHFWMEL*HRCTEL
Trigger: CAACTCAGTGCACCTGTGCAACAACTCCATCCAGAA...GTGATCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR CAA 90 bp TGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGTGCTTCTGGATGGAGTaGTTGCACAGGTGCACTGAG +
Preference number: 5 (lower is better)
Translates to: CSDFKGQRQQGTSSWGPRCFWME*LHRCTE
Trigger: CTCAGTGCACCTGTGCAACAACTCCATCCAGAAGCA...CCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GTTGGATCCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCCTAGCTTCTGGCTAGACCACATGTaGTCTGGCGGAAGCAGTGGA +
Preference number: 5 (lower is better)
Translates to: VGSRTRAVGNRSRGFPSFWLDHM*SGGSSG
Trigger: TCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCA...GAAGCTAGGGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CAA 90 bp ATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACCCATCTCCTGCAGGTGGCTAGACCACATGTaGTCTGGCGGAAGCAGTGGA +
Preference number: 5 (lower is better)
Translates to: MPGTMMVDQAFGAPISCRWLDHM*SGGSSG
Trigger: TCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCA...CCTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR CAA 90 bp CAGTTCCTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGGCGCAGGGTGTCAGCTaGCACGCCAGCACAGAGCCG +
Preference number: 5 (lower is better)
Translates to: QFLREQLAPFVFCLLLSQAQGVS*HASTEP
Trigger: CGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCGC...CTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAGGAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CAA 90 bp GCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCGCTCCTGTGTCACAGTaGCGGTCCAGCATCCGGTCA +
Preference number: 5 (lower is better)
Translates to: ALTFRQVLGIVPTSKGRGAPVSQ*RSSIRS
Trigger: TGACCGGATGCTGGACCGCAACTGTGACACAGGAGC...GCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp ATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGTTAGTGCCCACCAGCTaGCTGTGCTGTCGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: IRSLWRKGLLRETSSSLGLVPTS*LCCRLR
Trigger: CCTCAGACGACAGCACAGCAAGCTGGTGGGCACTAA...CCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GGGGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGTTAGTGCCCACCAGCTaGCTGTGCTGTCGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: GEKREMIRSLWRKGLLRELVPTS*LCCRLR
Trigger: CCTCAGACGACAGCACAGCAAGCTGGTGGGCACTAA...CTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GGCCAATTCCTTCCCCTGTCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTAGAGTCCTCAAGGCCTaGCCTGTGGTCGACAGGGCC +
Preference number: 5 (lower is better)
Translates to: GQFLPLSHGINVPMPGRCRVLKA*PVVDRA
Trigger: GGCCCTGTCGACCACAGGCAAGGCCTTGAGGACTCT...ACACCTACCGGGCATAGGAACGTTAATGCCATGAGACAGGGGAAGGAATTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp GCTGGGTGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCAGAGTCCTCAAGGCCTaGCCTGTGGTCGACAGGGCC +
Preference number: 5 (lower is better)
Translates to: AGCHLEIKVRWEGNEDLSRVLKA*PVVDRA
Trigger: GGCCCTGTCGACCACAGGCAAGGCCTTGAGGACTCT...GCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCCGAGGCCCACCTTTCTaGGCTTCAGGATGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: ALTFRQVLGIVPTSKGRGRGPPF*ASGCWV
Trigger: CACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTCG...GCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR CAA 90 bp GGAAGCCCCATGTCTGTCCTTAGGTGGGAATTCTGGGCCTCGCTGCACGGAGGAGCCTTGAATTTGCCTTaGGCCTTGACCTTCCGACAG +
Preference number: 5 (lower is better)
Translates to: GSPMSVLRWEFWASLHGGALNLP*ALTFRQ
Trigger: CTGTCGGAAGGTCAAGGCCAAAGGCAAATTCAAGGC...TCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGACATGGGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp GTCCATGCACATGATGCCTCGTCCGCGGGACTTGGCTCCTGGCTTCACGATCCAGCCTTGAATTTGCCTTaGGCCTTGACCTTCCGACAG +
Preference number: 5 (lower is better)
Translates to: VHAHDASSAGLGSWLHDPALNLP*ALTFRQ
Trigger: CTGTCGGAAGGTCAAGGCCAAAGGCAAATTCAAGGC...TGGATCGTGAAGCCAGGAGCCAAGTCCCGCGGACGAGGCATCATGTGCATGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000430390.5
CDS-3UTR CAA 90 bp ACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCACAGCCTTGAATTTGCCTTaGGCCTTGACCTTCCGACAG +
Preference number: 5 (lower is better)
Translates to: TSKGRGNKALPAGGLGGTALNLP*ALTFRQ
Trigger: CTGTCGGAAGGTCAAGGCCAAAGGCAAATTCAAGGC...TGTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS TCA 90 bp TGGAGAGGAAGCGACAGTCGAGCACATCCCGCCGAGTGGTCCAGATaGAGTAGGGGATCTCATTCTGGACCATGCGGGACATCAGAGCAT +
Preference number: 5 (lower is better)
Translates to: WRGSDSRAHPAEWSR*SRGSHSGPCGTSEH
Trigger: ATGCTCTGATGTCCCGCATGGTCCAGAATGAGATCCCCTACTTCATCTGGACCACTCGGCGGGATGTGCTCGACTGTCGCTTCCTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000310252.11
ENST00000426827.5
ENST00000427220.5
ENST00000430718.5
ENST00000438596.5
ENST00000452597.5
ENST00000452823.5
ENST00000474948.5
ENST00000496526.5
CDS GCA 90 bp TTGCACAGGTGCACTGAGTTGTCCAGGTTCTTCAGGGAGAAGGGTTaGCGTCCTTCATCACCACGGGGTTGCCGTTCACCAGCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: LHRCTELSRFFREKG*RPSSPRGCRSPASA
Trigger: TGCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGAAGGACGGCAACCCTTCTCCCTGAAGAACCTGGACAACTCAGTGCACCTGTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS GCA 90 bp ACTCAGGGAGGACAGGCAAGTCCTGGAAGCAGCCCTGGGCCACCCTaGACTATTCAACTTGAGATGGGGCCCTACTGGGAAGGACAAAAA +
Preference number: 5 (lower is better)
Translates to: TQGGQASPGSSPGPP*TIQLEMGPYWEGQK
Trigger: TTTTTGTCCTTCCCAGTAGGGCCCCATCTCAAGTTGAATAGTGCAGGGTGGCCCAGGGCTGCTTCCAGGACTTGCCTGTCCTCCCTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496526.5
CDS-3UTR CAA 90 bp TTCACCACCAGCTTGAGAACGTTGCGGGCAGCAGTCAGCCAGAAGTCCTCTGCTTGTTTCTTGGGCTGCTaGTCTCCTGAGGCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: FTTSLRTLRAAVSQKSSACFLGC*SPEASS
Trigger: GGAAGAGGCCTCAGGAGACAAGCAGCCCAAGAAACA...AGCAGAGGACTTCTGGCTGACTGCTGCCCGCAACGTTCTCAAGCTGGTGGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
CDS-3UTR CAA 90 bp GCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCCCCTTCGTGGACCACTaGGTAGTAGCGCTGGAGGAA +
Preference number: 5 (lower is better)
Translates to: ALTFRQVLGIVPTSKGRGPFVDH*VVALEE
Trigger: TTCCTCCAGCGCTACTACCAAGTGGTCCACGAAGGG...GCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCCTTCGTGGACCACTaGGTAGTAGCGCTGGAGGAA +
Preference number: 5 (lower is better)
Translates to: GDDQKSVEEGASEGDQLFPFVDH*VVALEE
Trigger: TTCCTCCAGCGCTACTACCAAGTGGTCCACGAAGGG...GAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTTCTGCACCACCCACTaGCCGTCCTTCATCACCACG +
Preference number: 5 (lower is better)
Translates to: DDQKSVEEGASEGDQLFPFCTTH*PSFITT
Trigger: CGTGGTGATGAAGGACGGCAAGTGGGTGGTGCAGAA...AGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000430793.1
ENST00000443148.5
CDS-3UTR CAA 90 bp AAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTTCTGCACCACCCACTaGCCGTCCTTCATCACCACG +
Preference number: 5 (lower is better)
Translates to: KREMIRSLWRKGLLRETSFCTTH*PSFITT
Trigger: CGTGGTGATGAAGGACGGCAAGTGGGTGGTGCAGAA...GCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000430793.1
ENST00000443148.5
CDS-3UTR CAA 90 bp AGCATCCTTCATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACCCATTTCTGCACCACCCACTaGCCGTCCTTCATCACCACG +
Preference number: 5 (lower is better)
Translates to: SILHARHDDGGPSIWGTHFCTTH*PSFITT
Trigger: CGTGGTGATGAAGGACGGCAAGTGGGTGGTGCAGAA...ATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCATGAAGGATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000431204.5
CDS-3UTR CAA 90 bp AGGGGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGATTCTGCACCACCCACTaGCCGTCCTTCATCACCACG +
Preference number: 5 (lower is better)
Translates to: RGEEGDDQKSVEEGASEGFCTTH*PSFITT
Trigger: CGTGGTGATGAAGGACGGCAAGTGGGTGGTGCAGAA...TCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000430793.1
ENST00000443148.5
CDS-3UTR CAA 90 bp TGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGTGTCTGAGGTCAAACTaGGTGCCAAAGATGAGGAGG +
Preference number: 5 (lower is better)
Translates to: CSDFKGQRQQGTSSWGPRCLRSN*VPKMRR
Trigger: CCTCCTCATCTTTGGCACCAAGTTTGACCTCAGACA...CCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
CDS-3UTR CAA 90 bp GGAAGCCCCATGTCTGTCCTTAGGTGGGAATTCTGGGCCTCGCTGCACGGAGGATGTCTGAGGTCAAACTaGGTGCCAAAGATGAGGAGG +
Preference number: 5 (lower is better)
Translates to: GSPMSVLRWEFWASLHGGCLRSN*VPKMRR
Trigger: CCTCCTCATCTTTGGCACCAAGTTTGACCTCAGACA...TCCTCCGTGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGACATGGGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp GTTGCGATCCCCTTCCATGTCTATCTGGGGTACCACGGCCTGCAGCTGCTGCAGTGTCTGAGGTCAAACTaGGTGCCAAAGATGAGGAGG +
Preference number: 5 (lower is better)
Translates to: VAIPFHVYLGYHGLQLLQCLRSN*VPKMRR
Trigger: CCTCCTCATCTTTGGCACCAAGTTTGACCTCAGACA...CTGCAGCAGCTGCAGGCCGTGGTACCCCAGATAGACATGGAAGGGGATCGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430390.5
CDS-3UTR CAA 90 bp GGCTTCCCTAGCTTCATATCCCCCAGGCCCCTGCGCCTCTGGAATGTACCAACATGCTTCTGGATGGAGTaGTTGCACAGGTGCACTGAG +
Preference number: 5 (lower is better)
Translates to: GFPSFISPRPLRLWNVPTCFWME*LHRCTE
Trigger: CTCAGTGCACCTGTGCAACAACTCCATCCAGAAGCA...TGTTGGTACATTCCAGAGGCGCAGGGGCCTGGGGGATATGAAGCTAGGGAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR CAA 90 bp AGTGCTCGGCAGTTCTGGCAATATGTCCCTGCGTCGACTCACTGCCACGTGATCTGGCTAGACCACATGTaGTCTGGCGGAAGCAGTGGA +
Preference number: 5 (lower is better)
Translates to: SARQFWQYVPASTHCHVIWLDHM*SGGSSG
Trigger: TCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCA...GATCACGTGGCAGTGAGTCGACGCAGGGACATATTGCCAGAACTGCCGAGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp ATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTGGGTGGCTAGACCACATGTaGTCTGGCGGAAGCAGTGGA +
Preference number: 5 (lower is better)
Translates to: IRSLWRKGLLRETSSSLGWLDHM*SGGSSG
Trigger: TCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCA...CCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp CTTGGCTCCTGGCTTCACGATCCAGATGTTGCGATCCCCTTCCATGTCTATCTGGCTCCTGTGTCACAGTaGCGGTCCAGCATCCGGTCA +
Preference number: 5 (lower is better)
Translates to: LGSWLHDPDVAIPFHVYLAPVSQ*RSSIRS
Trigger: TGACCGGATGCTGGACCGCAACTGTGACACAGGAGC...CAGATAGACATGGAAGGGGATCGCAACATCTGGATCGTGAAGCCAGGAGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000430390.5
CDS-3UTR CAA 90 bp CTGGGTGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCGCTCCTGTGTCACAGTaGCGGTCCAGCATCCGGTCA +
Preference number: 5 (lower is better)
Translates to: LGATLKSRFGGREMKTLAAPVSQ*RSSIRS
Trigger: TGACCGGATGCTGGACCGCAACTGTGACACAGGAGC...GGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp TGGCTAGACCACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGCATGAGTTCTTAGTGCCCACCAGCTaGCTGTGCTGTCGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: WLDHMLSGGSSGCRWHEFLVPTS*LCCRLR
Trigger: CCTCAGACGACAGCACAGCAAGCTGGTGGGCACTAA...GAACTCATGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CAA 90 bp CAGGCCAGGGGATACCCTGCTCAGCCCCTAGGCTTGAGGCCTGTTCTGGTTCCAGAACCTGATCATGACTaGCCCCATTTTGGATCCAGA +
Preference number: 5 (lower is better)
Translates to: QARGYPAQPLGLRPVLVPEPDHD*PHFGSR
Trigger: TCTGGATCCAAAATGGGGCAAGTCATGATCAGGTTC...TGGAACCAGAACAGGCCTCAAGCCTAGGGGCTGAGCAGGGTATCCCCTGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
CDS-3UTR CAA 90 bp CTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGGCAAACCCACACCCGAGGCCCTaGTGCCCCTTATCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: LREQLAPFVFCLLLSQANPHPRP*CPLSWH
Trigger: GTGCCAGGATAAGGGGCACAAGGGCCTCGGGTGTGG...GTTTGCCTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CAA 90 bp ATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTCGAGGCCCACCTTTCTaGGCTTCAGGATGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: MIRSLWRKGLLRETSSSLRGPPF*ASGCWV
Trigger: CACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTCG...AAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp ATCACAGCATCCTTCATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACGAGGCCCACCTTTCTaGGCTTCAGGATGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: ITASFMPGTMMVDQAFGARGPPF*ASGCWV
Trigger: CACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTCG...TGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCATGAAGGATGCTGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000473661.5
CDS-3UTR CAA 90 bp TCAGAGCGCAGTGGCGTGATCACAGCTCACCACAGTTTTGATCTTCCCAGGCTCGCCTCAGCCCTGGGTTaGTCACAGTCTGGCCTTGAA +
Preference number: 5 (lower is better)
Translates to: SERSGVITAHHSFDLPRLASALG*SQSGLE
Trigger: TTCAAGGCCAGACTGTGACAAACCCAGGGCTGAGGC...GAGCCTGGGAAGATCAAAACTGTGGTGAGCTGTGATCACGCCACTGCGCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp GAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCACAGGTGCACTGAGTaGCCGTCCTTCATCACCACG +
Preference number: 5 (lower is better)
Translates to: EEGDDQKSVEEGASEGDQHRCTE*PSFITT
Trigger: CGTGGTGATGAAGGACGGCAACTCAGTGCACCTGTG...CTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS TCA 90 bp GAGCCAGAGCTATGGTGCTGGGCACAGTGGTGCATTTCTCTCTGGTaGCACCTGCATGTTAGGAGCTGGGCCCTGCTTATAGATGAGCTC +
Preference number: 5 (lower is better)
Translates to: EPELWCWAQWCISLW*HLHVRSWALLIDEL
Trigger: GAGCTCATCTATAAGCAGGGCCCAGCTCCTAACATGCAGGTGTCACCAGAGAGAAATGCACCACTGTGCCCAGCACCATAGCTCTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS GCA 90 bp TCAGGCCTAAGCTGTTCTCAGGCCATGTGTAAAGCCCAGTTTCACTaGTTCCTCCTCCTCAGAGACCTGAACTCCTCACAGGCAGGGACG +
Preference number: 5 (lower is better)
Translates to: SGLSCSQAMCKAQFH*FLLLRDLNSSQAGT
Trigger: CGTCCCTGCCTGTGAGGAGTTCAGGTCTCTGAGGAGGAGGAAGCAGTGAAACTGGGCTTTACACATGGCCTGAGAACAGCTTAGGCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000455274.5
ENST00000473661.5
ENST00000496526.5
CDS GCA 90 bp GTTCTTTCCCCGAGAGGTGACTGCTTGAAGGCAAAGGCAGAATACTaGAGTGGGAAAAGCGTGGGCGCTGGAGAGAGCAACCTGGGCTTA +
Preference number: 5 (lower is better)
Translates to: VLSPRGDCLKAKAEY*SGKSVGAGESNLGL
Trigger: TAAGCCCAGGTTGCTCTCTCCAGCGCCCACGCTTTTCCCACTGCAGTATTCTGCCTTTGCCTTCAAGCAGTCACCTCTCGGGGAAAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493241.1
CDS GCA 90 bp CCACCACATTCTTCTAGGGCCAGAACCACTCTTATCTCTCAGGGCTaGTCTGAGGGCGCTAGTTACGGGGGCCGCAGTAGTAAGTGCTTT +
Preference number: 5 (lower is better)
Translates to: PPHSSRARTTLISQG*SEGASYGGRSSKCF
Trigger: AAAGCACTTACTACTGCGGCCCCCGTAACTAGCGCCCTCAGAGCAGCCCTGAGAGATAAGAGTGGTTCTGGCCCTAGAAGAATGTGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496526.5
CDS CCA 90 bp TGGAGAGCTGCCTCTGCTTCCCTGAATCCCTCGCTGATGGGTCCCTaGATTACAGGACTAGGAGCCTGGAGACACGAGCTAAATCCAGAA +
Preference number: 5 (lower is better)
Translates to: WRAASASLNPSLMGP*ITGLGAWRHELNPE
Trigger: TTCTGGATTTAGCTCGTGTCTCCAGGCTCCTAGTCCTGTAATCCAGGGACCCATCAGCGAGGGATTCAGGGAAGCAGAGGCAGCTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000455274.5
ENST00000473661.5
ENST00000496526.5
CDS-3UTR CAA 90 bp AGTTTCTTCATCTGTAAAGTGAAGGCTCACGCTCCCCACCCCTGGATCGGAGATACCAGCTTGAGAACGTaGCGGGCAGCAGTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: SFFICKVKAHAPHPWIGDTSLRT*RAAVSQ
Trigger: CTGGCTGACTGCTGCCCGCAACGTTCTCAAGCTGGT...ATCTCCGATCCAGGGGTGGGGAGCGTGAGCCTTCACTTTACAGATGAAGAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp TATGACTTCCACTCAGACTTCACCACCAGCTTGAGAACGTTGCGGGCAGCAGTCGACTTCACCACCAGCTaGAGAACGTTGCGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: YDFHSDFTTSLRTLRAAVDFTTS*RTLRAA
Trigger: TGCTGCCCGCAACGTTCTCAAGCTGGTGGTGAAGTC...GACTGCTGCCCGCAACGTTCTCAAGCTGGTGGTGAAGTCTGAGTGGAAGTCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
CDS-3UTR CAA 90 bp AGGGGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGATGTTTCTTGGGCTGCTaGTCTCCTGAGGCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: RGEEGDDQKSVEEGASEGCFLGC*SPEASS
Trigger: GGAAGAGGCCTCAGGAGACAAGCAGCCCAAGAAACA...TCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000443148.5
CDS-3UTR CAA 90 bp AATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTTCCATGTGGGCCAAGTaGCTAAGGTACTCCTCGCAC +
Preference number: 5 (lower is better)
Translates to: NCSDFKGQRQQGTSSWGPSMWAK*LRYSSH
Trigger: GTGCGAGGAGTACCTTAGCAACTTGGCCCACATGGA...AGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCTCCATGTGGGCCAAGTaGCTAAGGTACTCCTCGCAC +
Preference number: 5 (lower is better)
Translates to: EMIRSLWRKGLLRETSSSSMWAK*LRYSSH
Trigger: GTGCGAGGAGTACCTTAGCAACTTGGCCCACATGGA...GGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp TTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGGCAAACTGGGGCCTCCAGGTCCTaGTCGATGTCCATGTGGGCC +
Preference number: 5 (lower is better)
Translates to: FGSNSHLLFSVCCFLRQTGASRS*SMSMWA
Trigger: GGCCCACATGGACATCGACAAGGACCTGGAGGCCCC...AGTTTGCCTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CAA 90 bp TGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCGTGGGCCCTTCGTGGACCACTaGGTAGTAGCGCTGGAGGAA +
Preference number: 5 (lower is better)
Translates to: CHLEIKVRWEGNEDLSRGPFVDH*VVALEE
Trigger: TTCCTCCAGCGCTACTACCAAGTGGTCCACGAAGGG...CCCACGGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp CTGGGTGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCCCCTTCGTGGACCACTaGGTAGTAGCGCTGGAGGAA +
Preference number: 5 (lower is better)
Translates to: LGATLKSRFGGREMKTLAPFVDH*VVALEE
Trigger: TTCCTCCAGCGCTACTACCAAGTGGTCCACGAAGGG...GGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp TTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGGCAAACTCCTCGTCCGCGGGACTaGGCTCCTGGCTTCACGATC +
Preference number: 5 (lower is better)
Translates to: FGSNSHLLFSVCCFLRQTPRPRD*APGFTI
Trigger: GATCGTGAAGCCAGGAGCCAAGTCCCGCGGACGAGG...AGTTTGCCTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CAA 90 bp TTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGTGTCTGAGGTCAAACTaGGTGCCAAAGATGAGGAGG +
Preference number: 5 (lower is better)
Translates to: LFRLQRAEATRHFQLGASCLRSN*VPKMRR
Trigger: CCTCCTCATCTTTGGCACCAAGTTTGACCTCAGACA...CGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
CDS-3UTR CAA 90 bp TCAAAGGCTCCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACGCGCTTCTGGATGGAGTTGTaGCACAGGTGCACTGAGTTG +
Preference number: 5 (lower is better)
Translates to: SKAPVSQLRSSIRSMTTRFWMEL*HRCTEL
Trigger: CAACTCAGTGCACCTGTGCAACAACTCCATCCAGAA...GCGCGTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCCTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GAACCTCTGGCTAGACCACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGCATGCTTCTGGATGGAGTaGTTGCACAGGTGCACTGAG +
Preference number: 5 (lower is better)
Translates to: EPLARPHVVWRKQWMPMACFWME*LHRCTE
Trigger: CTCAGTGCACCTGTGCAACAACTCCATCCAGAAGCA...TGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCAGAGGTTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GTCCTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCATGCCAGGCACGATTGCTTCTGGATGGAGTaGTTGCACAGGTGCACTGAG +
Preference number: 5 (lower is better)
Translates to: VLGGLKCVDHSILHARHDCFWME*LHRCTE
Trigger: CTCAGTGCACCTGTGCAACAACTCCATCCAGAAGCA...ATCGTGCCTGGCATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTGCTTCTGGATGGAGTaGTTGCACAGGTGCACTGAG +
Preference number: 5 (lower is better)
Translates to: EGDDQKSVEEGASEGDQLCFWME*LHRCTE
Trigger: CTCAGTGCACCTGTGCAACAACTCCATCCAGAAGCA...GAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCTGGCTAGACCACATGTaGTCTGGCGGAAGCAGTGGA +
Preference number: 5 (lower is better)
Translates to: GDDQKSVEEGASEGDQLFWLDHM*SGGSSG
Trigger: TCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCA...GAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCTGGCTAGACCACATGTaGTCTGGCGGAAGCAGTGGA +
Preference number: 5 (lower is better)
Translates to: EMIRSLWRKGLLRETSSSWLDHM*SGGSSG
Trigger: TCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCA...GGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp CCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCTTAGTGCCCACCAGCTaGCTGTGCTGTCGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: PLALTFRQVLGIVPTSKGLVPTS*LCCRLR
Trigger: CCTCAGACGACAGCACAGCAAGCTGGTGGGCACTAA...GCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCCAGGCAGTGGTTGGGTaGGCATGCATGATAGTGAGG +
Preference number: 5 (lower is better)
Translates to: ALTFRQVLGIVPTSKGRGQAVVG*ACMIVR
Trigger: CCTCACTATCATGCATGCCAACCCAACCACTGCCTG...GCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR CAA 90 bp ACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCGGAGGCACAACAACCAAGCCTTCCTaGTGCATGACACACACAAGA +
Preference number: 5 (lower is better)
Translates to: TSKGRGNKALPAGGLGGTTTKPS*CMTHTR
Trigger: TCTTGTGTGTGTCATGCACAAGGAAGGCTTGGTTGT...TGTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GGGGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGATGCACCTGGGAGTCTaGGCCTATGTGAACCCAGTT +
Preference number: 5 (lower is better)
Translates to: GEKREMIRSLWRKGLLREMHLGV*AYVNPV
Trigger: AACTGGGTTCACATAGGCCAAGACTCCCAGGTGCAT...CTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR CAA 90 bp TTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTTGTTCTCTGGAGAGTCCTCAAGGCCTaGCCTGTGGTCGACAGGGCC +
Preference number: 5 (lower is better)
Translates to: LTFLCPVGVILLAWLVLWRVLKA*PVVDRA
Trigger: GGCCCTGTCGACCACAGGCAAGGCCTTGAGGACTCT...CCAGAGAACAAGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp ACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCCGAGGCCCACCTTTCTaGGCTTCAGGATGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: TGARNCSDFKGQRQQGTSRGPPF*ASGCWV
Trigger: CACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTCG...GGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR CAA 90 bp CCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCGCCTCAGCCCTGGGTTaGTCACAGTCTGGCCTTGAA +
Preference number: 5 (lower is better)
Translates to: PLALTFRQVLGIVPTSKGASALG*SQSGLE
Trigger: TTCAAGGCCAGACTGTGACAAACCCAGGGCTGAGGC...GCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACGCGCAGGGTGTCAGCTCACCGGGTAGCAGCCTaGGATTGTAAAGATCTTCTT +
Preference number: 5 (lower is better)
Translates to: VSQLRSSIRSMTTRRVSAHRVAA*DCKDLL
Trigger: AAGAAGATCTTTACAATCCAAGGCTGCTACCCGGTG...AGCTGACACCCTGCGCGTGGTCATTGACCGGATGCTGGACCGCAACTGTGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000430390.5
CDS-3UTR CAA 90 bp TTCTGCACCACCCACTTGCCGTCCTTCATCACCACGGGGTTGCCGTTCACCAGCCACCGGGTAGCAGCCTaGGATTGTAAAGATCTTCTT +
Preference number: 5 (lower is better)
Translates to: FCTTHLPSFITTGLPFTSHRVAA*DCKDLL
Trigger: AAGAAGATCTTTACAATCCAAGGCTGCTACCCGGTG...GCTGGTGAACGGCAACCCCGTGGTGATGAAGGACGGCAAGTGGGTGGTGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000431204.5
CDS-3UTR CAA 90 bp AAGTGCGTGGATCACAGCATCCTTCATGCCAGGCACGATGATGGTGGACCAAGCATCGCCATGGGCTTCTaGATGGTGAAGCCCTCTACC +
Preference number: 5 (lower is better)
Translates to: KCVDHSILHARHDDGGPSIAMGF*MVKPST
Trigger: GGTAGAGGGCTTCACCATCAAGAAGCCCATGGCGAT...GCTTGGTCCACCATCATCGTGCCTGGCATGAAGGATGCTGTGATCCACGCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS-3UTR CAA 90 bp CAGTTGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTGGATCCGTCGCCTCCCAGTaGCCTTTCAGCACAACCTCC +
Preference number: 5 (lower is better)
Translates to: QLPFSTTSTVLESVLSLGSVASQ*PFSTTS
Trigger: GGAGGTTGTGCTGAAAGGCAACTGGGAGGCGACGGA...TCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS TCA 90 bp TCTCCAGGGTGCTCGGCTACATGCCAGGCCCATGGGAGGGCTGAATaGGGAGTGGATCAACTAACAAACGGATGGGAAGACAAGTGTCTA +
Preference number: 5 (lower is better)
Translates to: SPGCSATCQAHGRAE*GVDQLTNGWEDKCL
Trigger: TAGACACTTGTCTTCCCATCCGTTTGTTAGTTGATCCACTCCTCATTCAGCCCTCCCATGGGCCTGGCATGTAGCCGAGCACCCTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000455274.5
ENST00000473661.5
ENST00000496526.5
CDS TCA 90 bp CCTTGTGCCCCTTATCCTGGCACACAACCAAGCCTTCCTTGTGCATaGCACACACAAGAGACAGCAATGGGGGAGTCTCTCTGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: PCAPYPGTQPSLPCA*HTQETAMGESLWKR
Trigger: CCTCTTCCAGAGAGACTCCCCCATTGCTGTCTCTTGTGTGTGTCATGCACAAGGAAGGCTTGGTTGTGTGCCAGGATAAGGGGCACAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000455274.5
ENST00000473661.5
ENST00000496526.5
CDS TCA 90 bp TTTCTCTCCAATATGAGCCAGAGCTTCAGCCCTGCTCTGTCAGCCTaGGGTTCAGGCATAGGGCTGGGGGTCTCCTTACCTATGAAGGCT +
Preference number: 5 (lower is better)
Translates to: FLSNMSQSFSPALSA*GSGIGLGVSLPMKA
Trigger: AGCCTTCATAGGTAAGGAGACCCCCAGCCCTATGCCTGAACCTCAGGCTGACAGAGCAGGGCTGAAGCTCTGGCTCATATTGGAGAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000483051.5
ENST00000496526.5
CDS GCA 90 bp AGGCCCTTGTGCCCCTTATCCTGGCACACAACCAAGCCTTCCTTGTaGATGACACACACAAGAGACAGCAATGGGGGAGTCTCTCTGGAA +
Preference number: 5 (lower is better)
Translates to: RPLCPLSWHTTKPSL*MTHTRDSNGGVSLE
Trigger: TTCCAGAGAGACTCCCCCATTGCTGTCTCTTGTGTGTGTCATGCACAAGGAAGGCTTGGTTGTGTGCCAGGATAAGGGGCACAAGGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000455274.5
ENST00000473661.5
ENST00000496526.5
CDS-3UTR CAA 90 bp GGGCTGAGGTTTAGGCAAGGCCAATTCCTTCCCCTGTCTCATGGCATTAACGTTGACTTCACCACCAGCTaGAGAACGTTGCGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: GLRFRQGQFLPLSHGINVDFTTS*RTLRAA
Trigger: TGCTGCCCGCAACGTTCTCAAGCTGGTGGTGAAGTC...AACGTTAATGCCATGAGACAGGGGAAGGAATTGGCCTTGCCTAAACCTCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp GCATCCTTCATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACCCATCTTCACGATCCAGATGTaGCGATCCCCTTCCATGTCT +
Preference number: 5 (lower is better)
Translates to: ASFMPGTMMVDQAFGAPIFTIQM*RSPSMS
Trigger: AGACATGGAAGGGGATCGCAACATCTGGATCGTGAA...GATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCATGAAGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CAA 90 bp CAGTTGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTGGATTCATCACCACGGGGTaGCCGTTCACCAGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: QLPFSTTSTVLESVLSLGFITTG*PFTSFS
Trigger: GCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGAA...TCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CAA 90 bp AGGTGCACTGAGTTGTCCAGGTTCTTCAGGGAGAAGGGCTGCGTGGAAAAGCGGTGTCTGAGGTCAAACTaGGTGCCAAAGATGAGGAGG +
Preference number: 5 (lower is better)
Translates to: RCTELSRFFREKGCVEKRCLRSN*VPKMRR
Trigger: CCTCCTCATCTTTGGCACCAAGTTTGACCTCAGACA...CCGCTTTTCCACGCAGCCCTTCTCCCTGAAGAACCTGGACAACTCAGTGCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000431204.5
CDS-3UTR CAA 90 bp AATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTTGCTTCTGGATGGAGTaGTTGCACAGGTGCACTGAG +
Preference number: 5 (lower is better)
Translates to: NCSDFKGQRQQGTSSWGPCFWME*LHRCTE
Trigger: CTCAGTGCACCTGTGCAACAACTCCATCCAGAAGCA...AGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACTGCTTCTGGATGGAGTaGTTGCACAGGTGCACTGAG +
Preference number: 5 (lower is better)
Translates to: GEEGDDQKSVEEGASEGDCFWME*LHRCTE
Trigger: CTCAGTGCACCTGTGCAACAACTCCATCCAGAAGCA...GTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GCTGGGTGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCTGGCTAGACCACATGTaGTCTGGCGGAAGCAGTGGA +
Preference number: 5 (lower is better)
Translates to: AGCHLEIKVRWEGNEDLSWLDHM*SGGSSG
Trigger: TCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCA...GCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GTTCAACCCACTACAACTAAGCAGTGCCACACTTTTCTTCAGGTGGGTGTGGCTGCTCCTGTGTCACAGTaGCGGTCCAGCATCCGGTCA +
Preference number: 5 (lower is better)
Translates to: VQPTTTKQCHTFLQVGVAAPVSQ*RSSIRS
Trigger: TGACCGGATGCTGGACCGCAACTGTGACACAGGAGC...AGCCACACCCACCTGAAGAAAAGTGTGGCACTGCTTAGTTGTAGTGGGTTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp TTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCGTGGGTAGAGTCGCTCCTGTGTCACAGTaGCGGTCCAGCATCCGGTCA +
Preference number: 5 (lower is better)
Translates to: LKSRFGGREMKTLAVGRVAPVSQ*RSSIRS
Trigger: TGACCGGATGCTGGACCGCAACTGTGACACAGGAGC...GACTCTACCCACGGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp CGTGCTCAGCACTGTCCACTGGGTGTGAGTCACAGGTCGAGGCCCACCTTTCTTGAACCTGATCATGACTaGCCCCATTTTGGATCCAGA +
Preference number: 5 (lower is better)
Translates to: RAQHCPLGVSHRSRPTFLEPDHD*PHFGSR
Trigger: TCTGGATCCAAAATGGGGCAAGTCATGATCAGGTTC...AAGAAAGGTGGGCCTCGACCTGTGACTCACACCCAGTGGACAGTGCTGAGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GCATCCTTCATGCCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACCCATCAATTTGCCTTTGGCCTaGACCTTCCGACAGGTGCTA +
Preference number: 5 (lower is better)
Translates to: ASFMPGTMMVDQAFGAPINLPLA*TFRQVL
Trigger: TAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAAATT...GATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCATGAAGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GGTGGGAGGGAAATGAAGACCTTAGCCGTGGGTAGAGTCCTCAAGGCCTTGCCTAATTTGCCTTTGGCCTaGACCTTCCGACAGGTGCTA +
Preference number: 5 (lower is better)
Translates to: GGREMKTLAVGRVLKALPNLPLA*TFRQVL
Trigger: TAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAAATT...AGGCAAGGCCTTGAGGACTCTACCCACGGCTAAGGTCTTCATTTCCCTCCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GTCCTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCATGCCAGGCACGATAGTCTGGCCTTGAATTaGCCTTTGGCCTTGACCTTC +
Preference number: 5 (lower is better)
Translates to: VLGGLKCVDHSILHARHDSLALN*PLALTF
Trigger: GAAGGTCAAGGCCAAAGGCAAATTCAAGGCCAGACT...ATCGTGCCTGGCATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGCCTCAGCCCTGGGTTaGTCACAGTCTGGCCTTGAA +
Preference number: 5 (lower is better)
Translates to: DLPTGARNCSDFKGQRQQASALG*SQSGLE
Trigger: TTCAAGGCCAGACTGTGACAAACCCAGGGCTGAGGC...TTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp CCAGGCACGATGATGGTGGACCAAGCATTTGGGGCACCCATCTCCTGCAGGTGGTCTTTTTATTTGGTGTaGGATCCAGGACAAGGGCAG +
Preference number: 5 (lower is better)
Translates to: PGTMMVDQAFGAPISCRWSFYLV*DPGQGQ
Trigger: CTGCCCTTGTCCTGGATCCAACACCAAATAAAAAGA...CCACCTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CAA 90 bp TTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACTCGCCCCATCCACTCTaGACCCTCCAACAGCAATGG +
Preference number: 5 (lower is better)
Translates to: LTFRQVLGIVPTSKGRGNSPHPL*TLQQQW
Trigger: CCATTGCTGTTGGAGGGTCAAGAGTGGATGGGGCGA...GTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR CAA 90 bp TCAGAGCGCAGTGGCGTGATCACAGCTCACCACAGTTTTGATCTTCCCAGGCTCCAGCTCACCACAGTTTaGATCTTCCCAGGCTCAGGT +
Preference number: 5 (lower is better)
Translates to: SERSGVITAHHSFDLPRLQLTTV*IFPGSG
Trigger: ACCTGAGCCTGGGAAGATCAAAACTGTGGTGAGCTG...GAGCCTGGGAAGATCAAAACTGTGGTGAGCTGTGATCACGCCACTGCGCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp TCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTCCGGATGCCCACATATaGAGGCACCTCCACAGCAGG +
Preference number: 5 (lower is better)
Translates to: SHGINVPMPGRCHSASLAPDAHI*RHLHSR
Trigger: CCTGCTGTGGAGGTGCCTCAATATGTGGGCATCCGG...AGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAATGCCATGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS GCA 90 bp GATGCCGATGGCATGAGTTCTCCAGGTGCTTCTGGATGGAGTTGTTaGACAGGTGCACTGAGTTGTCCAGGTTCTTCAGGGAGAAGGGTT +
Preference number: 5 (lower is better)
Translates to: DADGMSSPGASGWSC*TGALSCPGSSGRRV
Trigger: AACCCTTCTCCCTGAAGAACCTGGACAACTCAGTGCACCTGTGCAACAACTCCATCCAGAAGCACCTGGAGAACTCATGCCATCGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS GCA 90 bp GCTCTGAGGGCGCTAGTTACGGGGGCCGCAGTAGTAAGTGCTTTGTaGATAGTCTCAGTTAACCATCCCAGTGTCTGTGTGCTCTTCACA +
Preference number: 5 (lower is better)
Translates to: ALRALVTGAAVVSAL*IVSVNHPSVCVLFT
Trigger: TGTGAAGAGCACACAGACACTGGGATGGTTAACTGAGACTATGCACAAAGCACTTACTACTGCGGCCCCCGTAACTAGCGCCCTCAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496526.5
CDS-3UTR CAA 90 bp ATGAGCTCAAAGGCTCCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCTCTATGAAGGCTTTTTaGTCATCCTCAGCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: MSSKAPVSQLRSSIRSMTSMKAF*SSSAPR
Trigger: CCTGGGGGCTGAGGATGACAAAAAAGCCTTCATAGA...GGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCCTTTGAGCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS-3UTR CAA 90 bp AGTTTCTTCATCTGTAAAGTGAAGGCTCACGCTCCCCACCCCTGGATCGGAGATTGTTTCTTGGGCTGCTaGTCTCCTGAGGCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: SFFICKVKAHAPHPWIGDCFLGC*SPEASS
Trigger: GGAAGAGGCCTCAGGAGACAAGCAGCCCAAGAAACA...ATCTCCGATCCAGGGGTGGGGAGCGTGAGCCTTCACTTTACAGATGAAGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR CAA 90 bp ATAGGGTATGACTTCCACTCAGACTTCACCACCAGCTTGAGAACGTTGCGGGCATGTTTCTTGGGCTGCTaGTCTCCTGAGGCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: IGYDFHSDFTTSLRTLRACFLGC*SPEASS
Trigger: GGAAGAGGCCTCAGGAGACAAGCAGCCCAAGAAACA...TGCCCGCAACGTTCTCAAGCTGGTGGTGAAGTCTGAGTGGAAGTCATACCCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
CDS-3UTR CAA 90 bp GACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAATCCATGTGGGCCAAGTaGCTAAGGTACTCCTCGCAC +
Preference number: 5 (lower is better)
Translates to: DLPTGARNCSDFKGQRQQSMWAK*LRYSSH
Trigger: GTGCGAGGAGTACCTTAGCAACTTGGCCCACATGGA...TTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp TGTGGCTTATTGGATGTTTCATTTTTAGGTGACCTTGGCCCCTTGCTGAAGAAGGGGGCCTCCAGGTCCTaGTCGATGTCCATGTGGGCC +
Preference number: 5 (lower is better)
Translates to: CGLLDVSFLGDLGPLLKKGASRS*SMSMWA
Trigger: GGCCCACATGGACATCGACAAGGACCTGGAGGCCCC...CTTCTTCAGCAAGGGGCCAAGGTCACCTAAAAATGAAACATCCAATAAGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp GTTCAACCCACTACAACTAAGCAGTGCCACACTTTTCTTCAGGTGGGTGTGGCTCCCTTCGTGGACCACTaGGTAGTAGCGCTGGAGGAA +
Preference number: 5 (lower is better)
Translates to: VQPTTTKQCHTFLQVGVAPFVDH*VVALEE
Trigger: TTCCTCCAGCGCTACTACCAAGTGGTCCACGAAGGG...AGCCACACCCACCTGAAGAAAAGTGTGGCACTGCTTAGTTGTAGTGGGTTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp TATTTGGTGTTGGATCCAGGACAAGGGCAGTGGGGAATCGAAGCAGGGGCTTCCTTCACGATCCAGATGTaGCGATCCCCTTCCATGTCT +
Preference number: 5 (lower is better)
Translates to: YLVLDPGQGQWGIEAGASFTIQM*RSPSMS
Trigger: AGACATGGAAGGGGATCGCAACATCTGGATCGTGAA...GGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAACACCAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCTTCACGATCCAGATGTaGCGATCCCCTTCCATGTCT +
Preference number: 5 (lower is better)
Translates to: EMIRSLWRKGLLRETSSSFTIQM*RSPSMS
Trigger: AGACATGGAAGGGGATCGCAACATCTGGATCGTGAA...GGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000443148.5
ENST00000473661.5
CDS-3UTR CAA 90 bp CTTGAATTTGCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCTGCACCACCCACTaGCCGTCCTTCATCACCACG +
Preference number: 5 (lower is better)
Translates to: LEFAFGLDLPTGARNCSDFCTTH*PSFITT
Trigger: CGTGGTGATGAAGGACGGCAAGTGGGTGGTGCAGAA...GTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAAATTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
CDS-3UTR CAA 90 bp GGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCTGTCTGAGGTCAAACTaGGTGCCAAAGATGAGGAGG +
Preference number: 5 (lower is better)
Translates to: GDDQKSVEEGASEGDQLFCLRSN*VPKMRR
Trigger: CCTCCTCATCTTTGGCACCAAGTTTGACCTCAGACA...GAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000430793.1
ENST00000443148.5
CDS-3UTR CAA 90 bp TCAGAGCGCAGTGGCGTGATCACAGCTCACCACAGTTTTGATCTTCCCAGGCTCTTCTGGATGGAGTTGTaGCACAGGTGCACTGAGTTG +
Preference number: 5 (lower is better)
Translates to: SERSGVITAHHSFDLPRLFWMEL*HRCTEL
Trigger: CAACTCAGTGCACCTGTGCAACAACTCCATCCAGAA...GAGCCTGGGAAGATCAAAACTGTGGTGAGCTGTGATCACGCCACTGCGCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp CTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCATGCCAGGCACGATGATTTCTGGATGGAGTTGTaGCACAGGTGCACTGAGTTG +
Preference number: 5 (lower is better)
Translates to: LGGLKCVDHSILHARHDDFWMEL*HRCTEL
Trigger: CAACTCAGTGCACCTGTGCAACAACTCCATCCAGAA...ATCATCGTGCCTGGCATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000431204.5
ENST00000473661.5
CDS-3UTR CAA 90 bp AATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTTTCTGGATGGAGTTGTaGCACAGGTGCACTGAGTTG +
Preference number: 5 (lower is better)
Translates to: NCSDFKGQRQQGTSSWGPFWMEL*HRCTEL
Trigger: CAACTCAGTGCACCTGTGCAACAACTCCATCCAGAA...AGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp TGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTGGACTTCTGGCTAGACCACATGTaGTCTGGCGGAAGCAGTGGA +
Preference number: 5 (lower is better)
Translates to: CLSAQPPLFWRVCLALDFWLDHM*SGGSSG
Trigger: TCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCA...GAAGTCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CAA 90 bp TCAGTTCCTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGCTCCTGTGTCACAGTaGCGGTCCAGCATCCGGTCA +
Preference number: 5 (lower is better)
Translates to: SVPSGATRTFCFLSAAFSAPVSQ*RSSIRS
Trigger: TGACCGGATGCTGGACCGCAACTGTGACACAGGAGC...TGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAGGAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CAA 90 bp GTTCAACCCACTACAACTAAGCAGTGCCACACTTTTCTTCAGGTGGGTGTGGCTTTAGTGCCCACCAGCTaGCTGTGCTGTCGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: VQPTTTKQCHTFLQVGVALVPTS*LCCRLR
Trigger: CCTCAGACGACAGCACAGCAAGCTGGTGGGCACTAA...AGCCACACCCACCTGAAGAAAAGTGTGGCACTGCTTAGTTGTAGTGGGTTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp TTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTTGTTCTCTGGTTAGTGCCCACCAGCTaGCTGTGCTGTCGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: LTFLCPVGVILLAWLVLWLVPTS*LCCRLR
Trigger: CCTCAGACGACAGCACAGCAAGCTGGTGGGCACTAA...CCAGAGAACAAGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp CTTGAATTTGCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTAGTGCCCACCAGCTaGCTGTGCTGTCGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: LEFAFGLDLPTGARNCSDLVPTS*LCCRLR
Trigger: CCTCAGACGACAGCACAGCAAGCTGGTGGGCACTAA...GTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAAATTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACAATTTGCCTTTGGCCTaGACCTTCCGACAGGTGCTA +
Preference number: 5 (lower is better)
Translates to: GEEGDDQKSVEEGASEGDNLPLA*TFRQVL
Trigger: TAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAAATT...GTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR CAA 90 bp AATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTAATTTGCCTTTGGCCTaGACCTTCCGACAGGTGCTA +
Preference number: 5 (lower is better)
Translates to: NCSDFKGQRQQGTSSWGPNLPLA*TFRQVL
Trigger: TAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAAATT...AGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GCTGGGTGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCGCCTTGAATTTGCCTTaGGCCTTGACCTTCCGACAG +
Preference number: 5 (lower is better)
Translates to: AGCHLEIKVRWEGNEDLSALNLP*ALTFRQ
Trigger: CTGTCGGAAGGTCAAGGCCAAAGGCAAATTCAAGGC...GCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp TGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCGTGGGGCCTTGAATTTGCCTTaGGCCTTGACCTTCCGACAG +
Preference number: 5 (lower is better)
Translates to: CHLEIKVRWEGNEDLSRGALNLP*ALTFRQ
Trigger: CTGTCGGAAGGTCAAGGCCAAAGGCAAATTCAAGGC...CCCACGGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACAGTCTGGCCTTGAATTaGCCTTTGGCCTTGACCTTC +
Preference number: 5 (lower is better)
Translates to: GEEGDDQKSVEEGASEGDSLALN*PLALTF
Trigger: GAAGGTCAAGGCCAAAGGCAAATTCAAGGCCAGACT...GTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR CAA 90 bp GATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTAGTCTGGCCTTGAATTaGCCTTTGGCCTTGACCTTC +
Preference number: 5 (lower is better)
Translates to: DDQKSVEEGASEGDQLFPSLALN*PLALTF
Trigger: GAAGGTCAAGGCCAAAGGCAAATTCAAGGCCAGACT...AGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430793.1
ENST00000473661.5
CDS-3UTR CAA 90 bp CTTGAATTTGCCTTTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACGCCTCAGCCCTGGGTTaGTCACAGTCTGGCCTTGAA +
Preference number: 5 (lower is better)
Translates to: LEFAFGLDLPTGARNCSDASALG*SQSGLE
Trigger: TTCAAGGCCAGACTGTGACAAACCCAGGGCTGAGGC...GTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAAATTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GGCTTCCCTAGCTTCATATCCCCCAGGCCCCTGCGCCTCTGGAATGTACCAACATCTTTTTATTTGGTGTaGGATCCAGGACAAGGGCAG +
Preference number: 5 (lower is better)
Translates to: GFPSFISPRPLRLWNVPTSFYLV*DPGQGQ
Trigger: CTGCCCTTGTCCTGGATCCAACACCAAATAAAAAGA...TGTTGGTACATTCCAGAGGCGCAGGGGCCTGGGGGATATGAAGCTAGGGAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CAA 90 bp TCAAAGGCTCCTGTGTCACAGTTGCGGTCCAGCATCCGGTCAATGACCACGCGCTCTTTTTATTTGGTGTaGGATCCAGGACAAGGGCAG +
Preference number: 5 (lower is better)
Translates to: SKAPVSQLRSSIRSMTTRSFYLV*DPGQGQ
Trigger: CTGCCCTTGTCCTGGATCCAACACCAAATAAAAAGA...GCGCGTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCCTTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CAA 90 bp TCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTTCGCCCCATCCACTCTaGACCCTCCAACAGCAATGG +
Preference number: 5 (lower is better)
Translates to: SHGINVPMPGRCHSASLASPHPL*TLQQQW
Trigger: CCATTGCTGTTGGAGGGTCAAGAGTGGATGGGGCGA...AGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAATGCCATGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp TGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCGTGGGCAGCTCACCACAGTTTaGATCTTCCCAGGCTCAGGT +
Preference number: 5 (lower is better)
Translates to: CHLEIKVRWEGNEDLSRGQLTTV*IFPGSG
Trigger: ACCTGAGCCTGGGAAGATCAAAACTGTGGTGAGCTG...CCCACGGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR CAA 90 bp ATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCAGCTGGGGGCCTCCACCGGGTAGCAGCCTaGGATTGTAAAGATCTTCTT +
Preference number: 5 (lower is better)
Translates to: IVPTSKGRGNKALPAGGLHRVAA*DCKDLL
Trigger: AAGAAGATCTTTACAATCCAAGGCTGCTACCCGGTG...GAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000430390.5
CDS-3UTR CAA 90 bp AGTTTCTTCATCTGTAAAGTGAAGGCTCACGCTCCCCACCCCTGGATCGGAGATATCGCCATGGGCTTCTaGATGGTGAAGCCCTCTACC +
Preference number: 5 (lower is better)
Translates to: SFFICKVKAHAPHPWIGDIAMGF*MVKPST
Trigger: GGTAGAGGGCTTCACCATCAAGAAGCCCATGGCGAT...ATCTCCGATCCAGGGGTGGGGAGCGTGAGCCTTCACTTTACAGATGAAGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR CAA 90 bp GGGGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGCTGAGCTGTGCAACCTaGGGCAACTTCCTTAAACTT +
Preference number: 5 (lower is better)
Translates to: GEKREMIRSLWRKGLLRELSCAT*GNFLKL
Trigger: AAGTTTAAGGAAGTTGCCCAAGGTTGCACAGCTCAG...CTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443148.5
ENST00000473661.5
CDS TCA 90 bp ACCCTTCAGAAGACCCCGTGCACATCTACAGACCTGACTCACCCCTaGACATCGCAGTGCTCTGAAGATTCTGATATACAACTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: TLQKTPCTSTDLTHP*TSQCSEDSDIQLRP
Trigger: GGGCCTCAGTTGTATATCAGAATCTTCAGAGCACTGCGATGTTCAGGGGTGAGTCAGGTCTGTAGATGTGCACGGGGTCTTCTGAAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000455274.5
ENST00000473661.5
ENST00000496526.5
CDS TCA 90 bp CCAGAGGACCGGGAAACCCAGGCAATGCTGTCCTGTGAGGGTTGTTaGGTGACCAGCTGCTATATCCTATTAGTCACCCAGTTTCACTGT +
Preference number: 5 (lower is better)
Translates to: PEDRETQAMLSCEGC*VTSCYILLVTQFHC
Trigger: ACAGTGAAACTGGGTGACTAATAGGATATAGCAGCTGGTCACTCAACAACCCTCACAGGACAGCATTGCCTGGGTTTCCCGGTCCTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414814.5
ENST00000452597.5
CDS GCA 90 bp GCTGTCCATTTGGTGGCACAGTCCATGCTCTTAGTGACTATGCTATaGCAAGAACCAAGAAAAGTGGCCCAGACCCTATCACGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: AVHLVAQSMLLVTML*QEPRKVAQTLSRRQ
Trigger: CTGCCTCCGTGATAGGGTCTGGGCCACTTTTCTTGGTTCTTGGCATAGCATAGTCACTAAGAGCATGGACTGTGCCACCAAATGGACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602338.1
CDS CCA 90 bp GCACGCACACAGAGCTTCATCCACAAACTCTGGGGACACCAACACTaGGTTTTTCTCCTGTTTCTTGGGCTGCTTGTCTCCTATGAAGGC +
Preference number: 5 (lower is better)
Translates to: ARTQSFIHKLWGHQH*VFLLFLGLLVSYEG
Trigger: GCCTTCATAGGAGACAAGCAGCCCAAGAAACAGGAGAAAAACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAAGCTCTGTGTGCGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452823.5
CDS-3UTR CAA 90 bp GTTCAACCCACTACAACTAAGCAGTGCCACACTTTTCTTCAGGTGGGTGTGGCTTCCATGTGGGCCAAGTaGCTAAGGTACTCCTCGCAC +
Preference number: 5 (lower is better)
Translates to: VQPTTTKQCHTFLQVGVASMWAK*LRYSSH
Trigger: GTGCGAGGAGTACCTTAGCAACTTGGCCCACATGGA...AGCCACACCCACCTGAAGAAAAGTGTGGCACTGCTTAGTTGTAGTGGGTTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp CTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGGCAAACTCCATGTGGGCCAAGTaGCTAAGGTACTCCTCGCAC +
Preference number: 5 (lower is better)
Translates to: LREQLAPFVFCLLLSQANSMWAK*LRYSSH
Trigger: GTGCGAGGAGTACCTTAGCAACTTGGCCCACATGGA...GTTTGCCTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CAA 90 bp TTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGGCAAACTCCCTTCGTGGACCACTaGGTAGTAGCGCTGGAGGAA +
Preference number: 5 (lower is better)
Translates to: FGSNSHLLFSVCCFLRQTPFVDH*VVALEE
Trigger: TTCCTCCAGCGCTACTACCAAGTGGTCCACGAAGGG...AGTTTGCCTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CAA 90 bp AGCCTTTCTTGGCTTCAGGATGCTGGGTGCCACCTTGAAATCAAGGTTCGGTGGTTCACGATCCAGATGTaGCGATCCCCTTCCATGTCT +
Preference number: 5 (lower is better)
Translates to: SLSWLQDAGCHLEIKVRWFTIQM*RSPSMS
Trigger: AGACATGGAAGGGGATCGCAACATCTGGATCGTGAA...CCACCGAACCTTGATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430390.5
ENST00000438141.5
CDS-3UTR CAA 90 bp GGCCAATTCCTTCCCCTGTCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTTTCTGGATGGAGTTGTaGCACAGGTGCACTGAGTTG +
Preference number: 5 (lower is better)
Translates to: GQFLPLSHGINVPMPGRCFWMEL*HRCTEL
Trigger: CAACTCAGTGCACCTGTGCAACAACTCCATCCAGAA...ACACCTACCGGGCATAGGAACGTTAATGCCATGAGACAGGGGAAGGAATTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp AGTTTCTTCATCTGTAAAGTGAAGGCTCACGCTCCCCACCCCTGGATCGGAGATTGCTTCTGGATGGAGTaGTTGCACAGGTGCACTGAG +
Preference number: 5 (lower is better)
Translates to: SFFICKVKAHAPHPWIGDCFWME*LHRCTE
Trigger: CTCAGTGCACCTGTGCAACAACTCCATCCAGAAGCA...ATCTCCGATCCAGGGGTGGGGAGCGTGAGCCTTCACTTTACAGATGAAGAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp GATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTGAACCTGATCATGACTaGCCCCATTTTGGATCCAGA +
Preference number: 5 (lower is better)
Translates to: DDQKSVEEGASEGDQLFPEPDHD*PHFGSR
Trigger: TCTGGATCCAAAATGGGGCAAGTCATGATCAGGTTC...AGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000473661.5
CDS-3UTR CAA 90 bp CAGTTCCTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGCAGGCAGTGGTTGGGTaGGCATGCATGATAGTGAGG +
Preference number: 5 (lower is better)
Translates to: QFLREQLAPFVFCLLLSQQAVVG*ACMIVR
Trigger: CCTCACTATCATGCATGCCAACCCAACCACTGCCTG...CTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAGGAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CAA 90 bp TTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACGCCTTGAATTTGCCTTaGGCCTTGACCTTCCGACAG +
Preference number: 5 (lower is better)
Translates to: LTFRQVLGIVPTSKGRGNALNLP*ALTFRQ
Trigger: CTGTCGGAAGGTCAAGGCCAAAGGCAAATTCAAGGC...GTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp CTGGGTGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCAGTCTGGCCTTGAATTaGCCTTTGGCCTTGACCTTC +
Preference number: 5 (lower is better)
Translates to: LGATLKSRFGGREMKTLASLALN*PLALTF
Trigger: GAAGGTCAAGGCCAAAGGCAAATTCAAGGCCAGACT...GGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp TGCCACCTTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCGTGGGAGTCTGGCCTTGAATTaGCCTTTGGCCTTGACCTTC +
Preference number: 5 (lower is better)
Translates to: CHLEIKVRWEGNEDLSRGSLALN*PLALTF
Trigger: GAAGGTCAAGGCCAAAGGCAAATTCAAGGCCAGACT...CCCACGGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GGTAGAGTCCTCAAGGCCTTGCCTGTGGTCGACAGGGCCTTAGTGCCCACCAGCCTTGTTTCTTTTTATTaGGTGTTGGATCCAGGACAA +
Preference number: 5 (lower is better)
Translates to: GRVLKALPVVDRALVPTSLVSFY*VLDPGQ
Trigger: TTGTCCTGGATCCAACACCAAATAAAAAGAAACAAG...GCTGGTGGGCACTAAGGCCCTGTCGACCACAGGCAAGGCCTTGAGGACTCTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS TCA 90 bp TCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGGCAAACTCTCTaGGCCAGAGCTATGGTGCTGGGCACAGTGGTGCATTTCTCTCTG +
Preference number: 5 (lower is better)
Translates to: SHLLFSVCCFLRQTL*ARAMVLGTVVHFSL
Trigger: CAGAGAGAAATGCACCACTGTGCCCAGCACCATAGCTCTGGCTCAGAGAGTTTGCCTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CAA 90 bp ACAGAGCTTCATCCACAAACTCTGGGGACACCAACACTGGGTTTTTCTCCTGTTTGTTTCTTGGGCTGCTaGTCTCCTGAGGCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: TELHPQTLGTPTLGFSPVCFLGC*SPEASS
Trigger: GGAAGAGGCCTCAGGAGACAAGCAGCCCAAGAAACA...AACAGGAGAAAAACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAAGCTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000496246.5
CDS-3UTR CAA 90 bp TTGGCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGATTCACGATCCAGATGTaGCGATCCCCTTCCATGTCT +
Preference number: 5 (lower is better)
Translates to: LALTFRQVLGIVPTSKGRFTIQM*RSPSMS
Trigger: AGACATGGAAGGGGATCGCAACATCTGGATCGTGAA...TCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp ACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGTGTCTGAGGTCAAACTaGGTGCCAAAGATGAGGAGG +
Preference number: 5 (lower is better)
Translates to: TFRQVLGIVPTSKGRGNKCLRSN*VPKMRR
Trigger: CCTCCTCATCTTTGGCACCAAGTTTGACCTCAGACA...CTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
CDS-3UTR CAA 90 bp ACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGTTCTGGATGGAGTTGTaGCACAGGTGCACTGAGTTG +
Preference number: 5 (lower is better)
Translates to: TFRQVLGIVPTSKGRGNKFWMEL*HRCTEL
Trigger: CAACTCAGTGCACCTGTGCAACAACTCCATCCAGAA...CTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp TTGAAATCAAGGTTCGGTGGGAGGGAAATGAAGACCTTAGCCGTGGGTAGAGTCTGCTTCTGGATGGAGTaGTTGCACAGGTGCACTGAG +
Preference number: 5 (lower is better)
Translates to: LKSRFGGREMKTLAVGRVCFWME*LHRCTE
Trigger: CTCAGTGCACCTGTGCAACAACTCCATCCAGAAGCA...GACTCTACCCACGGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp CGCACGCACACAGAGCTTCATCCACAAACTCTGGGGACACCAACACTGGGTTTTGAACCTGATCATGACTaGCCCCATTTTGGATCCAGA +
Preference number: 5 (lower is better)
Translates to: RTHTELHPQTLGTPTLGFEPDHD*PHFGSR
Trigger: TCTGGATCCAAAATGGGGCAAGTCATGATCAGGTTC...AAAACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAAGCTCTGTGTGCGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000427220.5
ENST00000496246.5
CDS-3UTR CAA 90 bp GGGCTGAGGTTTAGGCAAGGCCAATTCCTTCCCCTGTCTCATGGCATTAACGTTAGTCTGGCCTTGAATTaGCCTTTGGCCTTGACCTTC +
Preference number: 5 (lower is better)
Translates to: GLRFRQGQFLPLSHGINVSLALN*PLALTF
Trigger: GAAGGTCAAGGCCAAAGGCAAATTCAAGGCCAGACT...AACGTTAATGCCATGAGACAGGGGAAGGAATTGGCCTTGCCTAAACCTCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp ACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGAGTCTGGCCTTGAATTaGCCTTTGGCCTTGACCTTC +
Preference number: 5 (lower is better)
Translates to: TFRQVLGIVPTSKGRGNKSLALN*PLALTF
Trigger: GAAGGTCAAGGCCAAAGGCAAATTCAAGGCCAGACT...CTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000430793.1
ENST00000438141.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GCCTTGACCTTCCGACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCTCTTTTTATTTGGTGTaGGATCCAGGACAAGGGCAG +
Preference number: 5 (lower is better)
Translates to: ALTFRQVLGIVPTSKGRGSFYLV*DPGQGQ
Trigger: CTGCCCTTGTCCTGGATCCAACACCAAATAAAAAGA...GCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CAA 90 bp ATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGACCAGCTCTTCCCTTCTGAGCTGTGCAACCTaGGGCAACTTCCTTAAACTT +
Preference number: 5 (lower is better)
Translates to: MIRSLWRKGLLRETSSSLLSCAT*GNFLKL
Trigger: AAGTTTAAGGAAGTTGCCCAAGGTTGCACAGCTCAG...AAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443148.5
ENST00000473661.5
CDS TCA 90 bp CGTGGGCGCTGGAGAGAGCAACCTGGGCTTAAGTCCTGGCATCTTTaGAATCAGGTCATCTTTGAAATAAGTCACTCTGTGAGGCAGAGT +
Preference number: 5 (lower is better)
Translates to: RGRWREQPGLKSWHL*NQVIFEISHSVRQS
Trigger: ACTCTGCCTCACAGAGTGACTTATTTCAAAGATGACCTGATTTCAAAGATGCCAGGACTTAAGCCCAGGTTGCTCTCTCCAGCGCCCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493241.1
CDS-3UTR CAA 90 bp TCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTTCTATGAAGGCTTTTTaGTCATCCTCAGCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: SHGINVPMPGRCHSASLASMKAF*SSSAPR
Trigger: CCTGGGGGCTGAGGATGACAAAAAAGCCTTCATAGA...AGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAATGCCATGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR CAA 90 bp TCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTTTCACGATCCAGATGTaGCGATCCCCTTCCATGTCT +
Preference number: 5 (lower is better)
Translates to: SHGINVPMPGRCHSASLAFTIQM*RSPSMS
Trigger: AGACATGGAAGGGGATCGCAACATCTGGATCGTGAA...AGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAATGCCATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp CAGTTCCTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGTGTCTGAGGTCAAACTaGGTGCCAAAGATGAGGAGG +
Preference number: 5 (lower is better)
Translates to: QFLREQLAPFVFCLLLSQCLRSN*VPKMRR
Trigger: CCTCCTCATCTTTGGCACCAAGTTTGACCTCAGACA...CTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAGGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CAA 90 bp TTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGGCAAACTTGCTTCTGGATGGAGTaGTTGCACAGGTGCACTGAG +
Preference number: 5 (lower is better)
Translates to: FGSNSHLLFSVCCFLRQTCFWME*LHRCTE
Trigger: CTCAGTGCACCTGTGCAACAACTCCATCCAGAAGCA...AGTTTGCCTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CAA 90 bp ACAGGTGCTAGGAATTGTTCCGACTTCAAAGGGCAGAGGCAACAAGGCACTTCCACAACCAAGCCTTCCTaGTGCATGACACACACAAGA +
Preference number: 5 (lower is better)
Translates to: TGARNCSDFKGQRQQGTSTTKPS*CMTHTR
Trigger: TCTTGTGTGTGTCATGCACAAGGAAGGCTTGGTTGT...GGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000473661.5
CDS-3UTR CAA 90 bp GTTCAACCCACTACAACTAAGCAGTGCCACACTTTTCTTCAGGTGGGTGTGGCTAATTTGCCTTTGGCCTaGACCTTCCGACAGGTGCTA +
Preference number: 5 (lower is better)
Translates to: VQPTTTKQCHTFLQVGVANLPLA*TFRQVL
Trigger: TAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAAATT...AGCCACACCCACCTGAAGAAAAGTGTGGCACTGCTTAGTTGTAGTGGGTTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp TGTGGCTTATTGGATGTTTCATTTTTAGGTGACCTTGGCCCCTTGCTGAAGAAGGCCTCAGCCCTGGGTTaGTCACAGTCTGGCCTTGAA +
Preference number: 5 (lower is better)
Translates to: CGLLDVSFLGDLGPLLKKASALG*SQSGLE
Trigger: TTCAAGGCCAGACTGTGACAAACCCAGGGCTGAGGC...CTTCTTCAGCAAGGGGCCAAGGTCACCTAAAAATGAAACATCCAATAAGCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp GGCTTCCCTAGCTTCATATCCCCCAGGCCCCTGCGCCTCTGGAATGTACCAACACTTGTTTCTTTTTATTaGGTGTTGGATCCAGGACAA +
Preference number: 5 (lower is better)
Translates to: GFPSFISPRPLRLWNVPTLVSFY*VLDPGQ
Trigger: TTGTCCTGGATCCAACACCAAATAAAAAGAAACAAG...TGTTGGTACATTCCAGAGGCGCAGGGGCCTGGGGGATATGAAGCTAGGGAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CAA 90 bp CGGTGTCCTGGGAGGTCTGAAGTGCGTGGATCACAGCATCCTTCATGCCAGGCACTTGTTTCTTTTTATTaGGTGTTGGATCCAGGACAA +
Preference number: 5 (lower is better)
Translates to: RCPGRSEVRGSQHPSCQALVSFY*VLDPGQ
Trigger: TTGTCCTGGATCCAACACCAAATAAAAAGAAACAAG...TGCCTGGCATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGACACCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CAA 90 bp AGGGGAGAAGAGGGAGATGATCAGAAGTCTGTGGAGGAAGGGGCTTCTGAGGGAGGTGGGTGTGGCTTATaGGATGTTTCATTTTTAGGT +
Preference number: 5 (lower is better)
Translates to: RGEEGDDQKSVEEGASEGGGCGL*DVSFLG
Trigger: ACCTAAAAATGAAACATCCAATAAGCCACACCCACC...TCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCTCCCTCTTCTCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383827.5
CDS-3UTR CAA 90 bp TTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGGCAAACTTTCACGATCCAGATGTaGCGATCCCCTTCCATGTCT +
Preference number: 5 (lower is better)
Translates to: FGSNSHLLFSVCCFLRQTFTIQM*RSPSMS
Trigger: AGACATGGAAGGGGATCGCAACATCTGGATCGTGAA...AGTTTGCCTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CAA 90 bp TCAGTTCCTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCATTCTGGATGGAGTTGTaGCACAGGTGCACTGAGTTG +
Preference number: 5 (lower is better)
Translates to: SVPSGATRTFCFLSAAFSFWMEL*HRCTEL
Trigger: CAACTCAGTGCACCTGTGCAACAACTCCATCCAGAA...TGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAGGAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CAA 90 bp GGGCTGAGGTTTAGGCAAGGCCAATTCCTTCCCCTGTCTCATGGCATTAACGTTTCTTTTTATTTGGTGTaGGATCCAGGACAAGGGCAG +
Preference number: 5 (lower is better)
Translates to: GLRFRQGQFLPLSHGINVSFYLV*DPGQGQ
Trigger: CTGCCCTTGTCCTGGATCCAACACCAAATAAAAAGA...AACGTTAATGCCATGAGACAGGGGAAGGAATTGGCCTTGCCTAAACCTCAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp GGTGGGTGTGGCTTATTGGATGTTTCATTTTTAGGTGACCTTGGCCCCTTGCTGCACCGGGTAGCAGCCTaGGATTGTAAAGATCTTCTT +
Preference number: 5 (lower is better)
Translates to: GGCGLLDVSFLGDLGPLLHRVAA*DCKDLL
Trigger: AAGAAGATCTTTACAATCCAAGGCTGCTACCCGGTG...CAGCAAGGGGCCAAGGTCACCTAAAAATGAAACATCCAATAAGCCACACCCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426895.9
CDS-3UTR CAA 90 bp TTACGTTCTTTGTCAAAGAAGATATTAAGCTTTGTTCTGACCCCAGGAGAGCTCTTCTGCACCACCCACTaGCCGTCCTTCATCACCACG +
Preference number: 5 (lower is better)
Translates to: LRSLSKKILSFVLTPGELFCTTH*PSFITT
Trigger: CGTGGTGATGAAGGACGGCAAGTGGGTGGTGCAGAA...GAGCTCTCCTGGGGTCAGAACAAAGCTTAATATCTTCTTTGACAAAGAACGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CAA 90 bp CTGTTCTGGTTCCAGAACCTGATCATGACTTGCCCCATTTTGGATCCAGAACCTGAACCTGATCATGACTaGCCCCATTTTGGATCCAGA +
Preference number: 5 (lower is better)
Translates to: LFWFQNLIMTCPILDPEPEPDHD*PHFGSR
Trigger: TCTGGATCCAAAATGGGGCAAGTCATGATCAGGTTC...AGGTTCTGGATCCAAAATGGGGCAAGTCATGATCAGGTTCTGGAACCAGAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000474948.5
ENST00000496246.5
CDS-3UTR CAA 90 bp TGGCTAGACCACATGTTGTCTGGCGGAAGCAGTGGATGCCGATGGCATGAGTTCCTTGTTTCTTTTTATTaGGTGTTGGATCCAGGACAA +
Preference number: 5 (lower is better)
Translates to: WLDHMLSGGSSGCRWHEFLVSFY*VLDPGQ
Trigger: TTGTCCTGGATCCAACACCAAATAAAAAGAAACAAG...GAACTCATGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427220.5
ENST00000430390.5
ENST00000473661.5
CDS-3UTR CAA 90 bp CTTCGGGAGCAACTCGCACCTTTTGTTTTCTGTCTGCTGCTTTCTCAGGCAAACAGCAACTCGCACCTTTaGTTTTCTGTCTGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: LREQLAPFVFCLLLSQANSNSHL*FSVCCF
Trigger: AAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCT...GTTTGCCTGAGAAAGCAGCAGACAGAAAACAAAAGGTGCGAGTTGCTCCCGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CAA 90 bp GGTGGGTGTGGCTTATTGGATGTTTCATTTTTAGGTGACCTTGGCCCCTTGCTGGGTGGGTGTGGCTTATaGGATGTTTCATTTTTAGGT +
Preference number: 5 (lower is better)
Translates to: GGCGLLDVSFLGDLGPLLGGCGL*DVSFLG
Trigger: ACCTAAAAATGAAACATCCAATAAGCCACACCCACC...CAGCAAGGGGCCAAGGTCACCTAAAAATGAAACATCCAATAAGCCACACCCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS-3UTR CAA 90 bp CAGTTGCCTTTCAGCACAACCTCCACTGTTCTGGAGAGTGTGCTTAGCCTTGGAGTTCCCTTTTCAGTGTaGTCTCTCTTTGCAAATGTT +
Preference number: 5 (lower is better)
Translates to: QLPFSTTSTVLESVLSLGVPFSV*SLFANV
Trigger: AACATTTGCAAAGAGAGACAACACTGAAAAGGGAAC...TCCAAGGCTAAGCACACTCTCCAGAACAGTGGAGGTTGTGCTGAAAGGCAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS-3UTR CAA 90 bp TTACGTTCTTTGTCAAAGAAGATATTAAGCTTTGTTCTGACCCCAGGAGAGCTCATGCACCTGGGAGTCTaGGCCTATGTGAACCCAGTT +
Preference number: 5 (lower is better)
Translates to: LRSLSKKILSFVLTPGELMHLGV*AYVNPV
Trigger: AACTGGGTTCACATAGGCCAAGACTCCCAGGTGCAT...GAGCTCTCCTGGGGTCAGAACAAAGCTTAATATCTTCTTTGACAAAGAACGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS TCA 90 bp AAAAGAACTTGCTCCTGTTTCAGTTGTGTAACCAGACCCCAAATCTaGCCTGACTTGGATCATATTCTGCCTTCAGAATCTGGCTTGGAC +
Preference number: 5 (lower is better)
Translates to: KRTCSCFSCVTRPQI*PDLDHILPSESGLD
Trigger: GTCCAAGCCAGATTCTGAAGGCAGAATATGATCCAAGTCAGGTCAGATTTGGGGTCTGGTTACACAACTGAAACAGGAGCAAGTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483051.5
ENST00000496526.5
CDS CCA 90 bp AACCAAGGCTTAAATAGGTTTTCACATGACCAGATTCAAACAACTTaGAAGTTGTCCAGGTTCTTCAGGGAGAAGGGCTGCGTGGAAAAG +
Preference number: 5 (lower is better)
Translates to: NQGLNRFSHDQIQTT*KLSRFFREKGCVEK
Trigger: CTTTTCCACGCAGCCCTTCTCCCTGAAGAACCTGGACAACTTCCAAGTTGTTTGAATCTGGTCATGTGAAAACCTATTTAAGCCTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496526.5
CDS-3UTR CAA 90 bp TCTCATGGCATTAACGTTCCTATGCCCGGTAGGTGTCATTCTGCTAGCTTGGCTCTTGTTTCTTTTTATTaGGTGTTGGATCCAGGACAA +
Preference number: 5 (lower is better)
Translates to: SHGINVPMPGRCHSASLALVSFY*VLDPGQ
Trigger: TTGTCCTGGATCCAACACCAAATAAAAAGAAACAAG...AGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAATGCCATGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383827.5
ENST00000426895.9
CDS TCA 90 bp TTGAGTGACCAGCTGCTATATCCTATTAGTCACCCAGTTTCACTGTaGGCACCTTTAACATTCACTGCAAAGCTAGAACATAGCCATGTG +
Preference number: 5 (lower is better)
Translates to: LSDQLLYPISHPVSL*APLTFTAKLEHSHV
Trigger: CACATGGCTATGTTCTAGCTTTGCAGTGAATGTTAAAGGTGCTCACAGTGAAACTGGGTGACTAATAGGATATAGCAGCTGGTCACTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414814.5
ENST00000452597.5
CDS-3UTR CAA 90 bp ACGTTCTTTGTCAAAGAAGATATTAAGCTTTGTTCTGACCCCAGGAGAGCTCTTACAACCAAGCCTTCCTaGTGCATGACACACACAAGA +
Preference number: 5 (lower is better)
Translates to: TFFVKEDIKLCSDPRRALTTKPS*CMTHTR
Trigger: TCTTGTGTGTGTCATGCACAAGGAAGGCTTGGTTGT...AAGAGCTCTCCTGGGGTCAGAACAAAGCTTAATATCTTCTTTGACAAAGAACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS CCA 90 bp ATCTATTTACTTCCTGTAGAATTAACATCCACACAACACACACTTTaGGTAATGTGCTGTCCATTTGGTGGCACAGTCCATGCTCTTAGT +
Preference number: 5 (lower is better)
Translates to: IYLLPVELTSTQHTL*VMCCPFGGTVHALS
Trigger: ACTAAGAGCATGGACTGTGCCACCAAATGGACAGCACATTACCCAAAGTGTGTGTTGTGTGGATGTTAATTCTACAGGAAGTAAATAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602338.1
CDS GCA 72 bp TGCGTGGCTCGAGCGGCTGCGGCTTCCGCAGCCAGTTaGACACCGCGCCGCCCTCCTGGCGGTACCAGGAGG +
Preference number: 6 (lower is better)
Translates to: CVARAAAASAAS*TPRRPPGGTRR
Trigger: CCTCCTGGTACCGCCAGGAGGGCGGCGCGGTGTGCAACTGGCTGCGGAAGCCGCAGCCGCTCGAGCCACGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426895.9
ENST00000427220.5
CDS CCA 72 bp GTGGACGGAACTCGGAGCGGCGCGCCGAGGGGAAACTaGTGCGTGGCTCGAGCGGCTGCGGCTTCCGCAGCC +
Preference number: 6 (lower is better)
Translates to: VDGTRSGAPRGN*CVARAAAASAA
Trigger: GGCTGCGGAAGCCGCAGCCGCTCGAGCCACGCACCAGTTTCCCCTCGGCGCGCCGCTCCGAGTTCCGTCCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426895.9
ENST00000427220.5
CDS CAA 72 bp GTGCGTGGCTCGAGCGGCTGCGGCTTCCGCAGCCAGTaGCACACCGCGCCGCCCTCCTGGCGGTACCAGGAG +
Preference number: 6 (lower is better)
Translates to: VRGSSGCGFRSQ*HTAPPSWRYQE
Trigger: CTCCTGGTACCGCCAGGAGGGCGGCGCGGTGTGCAACTGGCTGCGGAAGCCGCAGCCGCTCGAGCCACGCAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426895.9
ENST00000427220.5
CDS CAA 90 bp GGGAAACTGGTGCGTGGCTCGAGCGGCTGCGGCTTCCGCAGCCAGTaGCACACCGCGCCGCCCTCCTGGCGGTACCAGGAGGCCGAGCCC +
Preference number: 6 (lower is better)
Translates to: GKLVRGSSGCGFRSQ*HTAPPSWRYQEAEP
Trigger: GGGCTCGGCCTCCTGGTACCGCCAGGAGGGCGGCGCGGTGTGCAACTGGCTGCGGAAGCCGCAGCCGCTCGAGCCACGCACCAGTTTCCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426895.9
ENST00000427220.5
CDS GCA 72 bp GACGGAACTCGGAGCGGCGCGCCGAGGGGAAACTGGTaGGTGGCTCGAGCGGCTGCGGCTTCCGCAGCCAGT +
Preference number: 6 (lower is better)
Translates to: DGTRSGAPRGNW*VARAAAASAAS
Trigger: ACTGGCTGCGGAAGCCGCAGCCGCTCGAGCCACGCACCAGTTTCCCCTCGGCGCGCCGCTCCGAGTTCCGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426895.9
ENST00000427220.5
CDS CCA 72 bp GAACTCGGAGCGGCGCGCCGAGGGGAAACTGGTGCGTaGCTCGAGCGGCTGCGGCTTCCGCAGCCAGTTGCA +
Preference number: 6 (lower is better)
Translates to: ELGAARRGETGA*LERLRLPQPVA
Trigger: TGCAACTGGCTGCGGAAGCCGCAGCCGCTCGAGCCACGCACCAGTTTCCCCTCGGCGCGCCGCTCCGAGTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426895.9
ENST00000427220.5
CDS GCA 72 bp GCCTTCCCCAGAGCCTCGCTGGGTCAGCAGAGGGACTaGTGGGCGGACCCCCATCCGCCGATGACACATCGC +
Preference number: 6 (lower is better)
Translates to: AFPRASLGQQRD*WADPHPPMTHR
Trigger: GCGATGTGTCATCGGCGGATGGGGGTCCGCCCAGCAGTCCCTCTGCTGACCCAGCGAGGCTCTGGGGAAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443148.5
CDS CAA 90 bp GAGCCTAGCGCTGCTGCGCGAGTCCCCTGCACTGTAATCGCCTGTTaGCTTGCCAGCTCCCCAACTAGGCAGGGAGCTCGTGGGAGGCGA +
Preference number: 6 (lower is better)
Translates to: EPSAAARVPCTVIAC*LASSPTRQGARGRR
Trigger: TCGCCTCCCACGAGCTCCCTGCCTAGTTGGGGAGCTGGCAAGCAAACAGGCGATTACAGTGCAGGGGACTCGCGCAGCAGCGCTAGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492440.1
CDS CAA 90 bp TGCCCACAGCCCAAAGTCCCAGCTGCAGGGGACTCACTGGACCACTaGGTAGTAGCGCTGGAGGAAGAGGGACCAGCCCTCGGGGGTGAG +
Preference number: 6 (lower is better)
Translates to: CPQPKVPAAGDSLDH*VVALEEEGPALGGE
Trigger: CTCACCCCCGAGGGCTGGTCCCTCTTCCTCCAGCGCTACTACCAAGTGGTCCAGTGAGTCCCCTGCAGCTGGGACTTTGGGCTGTGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602338.1
CDS TCA 72 bp TGCAGCTGCTGCAGGATGTCCTCACAGCGCTGGACCTaGGTGTCGAGGTGCCTGAGTTCTGCCCCTTCGCTG +
Preference number: 6 (lower is better)
Translates to: CSCCRMSSQRWT*VSRCLSSAPSL
Trigger: CAGCGAAGGGGCAGAACTCAGGCACCTCGACACTCAGGTCCAGCGCTGTGAGGACATCCTGCAGCAGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482269.1
ENST00000492440.1
CDS TCA 72 bp CCTATCACGGAGGCAGTGGGAGTCCTCGAGGGTTCCTaGGCAGAACAGCGGGGTAAACGAGCGGGAGGCTTG +
Preference number: 6 (lower is better)
Translates to: PITEAVGVLEGS*AEQRGKRAGGL
Trigger: CAAGCCTCCCGCTCGTTTACCCCGCTGTTCTGCTCAGGAACCCTCGAGGACTCCCACTGCCTCCGTGATAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602338.1
CDS GCA 72 bp GATCCTCGCCAGAGGACCGGGAAACCTGCAGAAAGATaGGGAATAGGGGCGGGGTACACTGAGGCTGGGCCT +
Preference number: 6 (lower is better)
Translates to: DPRQRTGKPAER*GIGAGYTEAGP
Trigger: AGGCCCAGCCTCAGTGTACCCCGCCCCTATTCCGCATCTTTCTGCAGGTTTCCCGGTCCTCTGGCGAGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427220.5
CDS GCA 72 bp CTGTGTGTGGAGCCTAGCGCTGCTGCGCGAGTCCCCTaGACTGTAATCGCCTGTTTGCTTGCCAGCTCCCCA +
Preference number: 6 (lower is better)
Translates to: LCVEPSAAARVP*TVIACLLASSP
Trigger: TGGGGAGCTGGCAAGCAAACAGGCGATTACAGTGCAGGGGACTCGCGCAGCAGCGCTAGGCTCCACACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492440.1
CDS CCA 72 bp CCTCCGTTCCAAGCCCCGCCCCGTTTGCTATTGCCTTaGAAACCATTCCCTGGGCACCATCAGACCGCTCGG +
Preference number: 6 (lower is better)
Translates to: PPFQAPPRLLLP*KPFPGHHQTAR
Trigger: CCGAGCGGTCTGATGGTGCCCAGGGAATGGTTTCCAAGGCAATAGCAAACGGGGCGGGGCTTGGAACGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419081.5
CDS TCA 72 bp TGCAGCTGCTGCAGGATGTCCTCACAGCGCTGGACCTaGGTGTCGAGGTGCCTGAGTTCTGCCCCTTCGCAT +
Preference number: 6 (lower is better)
Translates to: CSCCRMSSQRWT*VSRCLSSAPSH
Trigger: ATGCGAAGGGGCAGAACTCAGGCACCTCGACACTCAGGTCCAGCGCTGTGAGGACATCCTGCAGCAGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430390.5
CDS GCA 72 bp GACGGACCATGTCTTCTTAGTCTGCCCTCTCCAGGGTaGTCGGCTACATGCCAGGCCCATGGGAGGGCTGAA +
Preference number: 6 (lower is better)
Translates to: DGPCLLSLPSPG*SATCQAHGRAE
Trigger: TTCAGCCCTCCCATGGGCCTGGCATGTAGCCGAGCACCCTGGAGAGGGCAGACTAAGAAGACATGGTCCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000455274.5
ENST00000473661.5
ENST00000496526.5
CDS CCA 72 bp CCAAGAAAAGTGGCCCAGACCCTATCACGGAGGCAGTaGGAGTCCTCGAGGGTTCCTGAGCAGAACAGCGGG +
Preference number: 6 (lower is better)
Translates to: PRKVAQTLSRRQ*ESSRVPEQNSG
Trigger: CCCGCTGTTCTGCTCAGGAACCCTCGAGGACTCCCACTGCCTCCGTGATAGGGTCTGGGCCACTTTTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602338.1
CDS CAA 72 bp CAGGGAGAAGGGTTGCCGTCCTTCATCACCACGGGGTaGCCGTTCACCAGCTTCAGCATCTCCTCCAGGTGG +
Preference number: 6 (lower is better)
Translates to: QGEGLPSFITTG*PFTSFSISSRW
Trigger: CCACCTGGAGGAGATGCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGAAGGACGGCAACCCTTCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS GCA 72 bp TCGAGCCTTGTCCTCCGTTCCAAGCCCCGCCCCGTTTaGTATTGCCTTGGAAACCATTCCCTGGGCACCATC +
Preference number: 6 (lower is better)
Translates to: SSLVLRSKPRPV*YCLGNHSLGTI
Trigger: GATGGTGCCCAGGGAATGGTTTCCAAGGCAATAGCAAACGGGGCGGGGCTTGGAACGGAGGACAAGGCTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419081.5
CDS GCA 72 bp AGGGAGAAGGGTTGCCGTCCTTCATCACCACGGGGTTaGCGTTCACCAGCTTCAGCATCTCCTCCAGGTGGT +
Preference number: 6 (lower is better)
Translates to: REKGCRPSSPRG*RSPASASPPGG
Trigger: ACCACCTGGAGGAGATGCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGAAGGACGGCAACCCTTCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS CCA 72 bp AGCCAGCCCGGGCGTAGTGGTTTATCATCTGATCCTTaGAGAGGAAGCGACAGTCGAGCACATCCCGCCGAG +
Preference number: 6 (lower is better)
Translates to: SQPGRSGLSSDP*RGSDSRAHPAE
Trigger: CTCGGCGGGATGTGCTCGACTGTCGCTTCCTCTCCAAGGATCAGATGATAAACCACTACGCCCGGGCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000310252.11
ENST00000426827.5
ENST00000427220.5
ENST00000430718.5
ENST00000438596.5
ENST00000443148.5
ENST00000452823.5
ENST00000474948.5
ENST00000496526.5
CDS CAA 72 bp CCTTGTCCTCCGTTCCAAGCCCCGCCCCGTTTGCTATaGCCTTGGAAACCATTCCCTGGGCACCATCAGACC +
Preference number: 6 (lower is better)
Translates to: PCPPFQAPPRLL*PWKPFPGHHQT
Trigger: GGTCTGATGGTGCCCAGGGAATGGTTTCCAAGGCAATAGCAAACGGGGCGGGGCTTGGAACGGAGGACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419081.5
CDS CAA 90 bp AAACCTAGGCTCGAGCCTTGTCCTCCGTTCCAAGCCCCGCCCCGTTaGCTATTGCCTTGGAAACCATTCCCTGGGCACCATCAGACCGCT +
Preference number: 6 (lower is better)
Translates to: KPRLEPCPPFQAPPR*LLPWKPFPGHHQTA
Trigger: AGCGGTCTGATGGTGCCCAGGGAATGGTTTCCAAGGCAATAGCAAACGGGGCGGGGCTTGGAACGGAGGACAAGGCTCGAGCCTAGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419081.5
CDS CAA 90 bp GGCTGGGTCTGCATCCCAGCTGTGCCCCTTCTGAGCTGTGCAACCTaGGGCAACTTCCTTAAACTTCCTGATACCTCGGCTGTGGGTAGG +
Preference number: 6 (lower is better)
Translates to: GWVCIPAVPLLSCAT*GNFLKLPDTSAVGR
Trigger: CCTACCCACAGCCGAGGTATCAGGAAGTTTAAGGAAGTTGCCCAAGGTTGCACAGCTCAGAAGGGGCACAGCTGGGATGCAGACCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443148.5
CDS TCA 72 bp AGCGACAGTCGAGCACATCCCGCCGAGTGGTCCAGATaGAGTAGGGGATCTCATTCTGGACCATGCGGGACA +
Preference number: 6 (lower is better)
Translates to: SDSRAHPAEWSR*SRGSHSGPCGT
Trigger: TGTCCCGCATGGTCCAGAATGAGATCCCCTACTTCATCTGGACCACTCGGCGGGATGTGCTCGACTGTCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000310252.11
ENST00000426827.5
ENST00000427220.5
ENST00000430718.5
ENST00000438596.5
ENST00000452597.5
ENST00000452823.5
ENST00000474948.5
ENST00000496526.5
CDS TCA 72 bp TGTCCTCACAGCGCTGGACCTGAGTGTCGAGGTGCCTaGGTTCTGCCCCTTCGCATCAGAGCATGTGTTCCA +
Preference number: 6 (lower is better)
Translates to: CPHSAGPECRGA*VLPLRIRACVP
Trigger: TGGAACACATGCTCTGATGCGAAGGGGCAGAACTCAGGCACCTCGACACTCAGGTCCAGCGCTGTGAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430390.5
CDS GCA 72 bp TCTTCTAGGGCCAGAACCACTCTTATCTCTCAGGGCTaGTCTGAGGGCGCTAGTTACGGGGGCCGCAGTAGT +
Preference number: 6 (lower is better)
Translates to: SSRARTTLISQG*SEGASYGGRSS
Trigger: ACTACTGCGGCCCCCGTAACTAGCGCCCTCAGAGCAGCCCTGAGAGATAAGAGTGGTTCTGGCCCTAGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496526.5
CDS CCA 72 bp CTCTCCCATCCAAACTCAGGGAGGACAGGCAAGTCCTaGAAGCAGCCCTGGGCCACCCTGCACTATTCAACT +
Preference number: 6 (lower is better)
Translates to: LSHPNSGRTGKS*KQPWATLHYST
Trigger: AGTTGAATAGTGCAGGGTGGCCCAGGGCTGCTTCCAGGACTTGCCTGTCCTCCCTGAGTTTGGATGGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496526.5
CDS CAA 90 bp CCGAGGCCCTTGTGCCCCTTATCCTGGCACACAACCAAGCCTTCCTaGTGCATGACACACACAAGAGACAGCAATGGGGGAGTCTCTCTG +
Preference number: 6 (lower is better)
Translates to: PRPLCPLSWHTTKPS*CMTHTRDSNGGVSL
Trigger: CAGAGAGACTCCCCCATTGCTGTCTCTTGTGTGTGTCATGCACAAGGAAGGCTTGGTTGTGTGCCAGGATAAGGGGCACAAGGGCCTCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000455274.5
ENST00000473661.5
ENST00000496526.5
CDS CAA 90 bp CCAGCCCCTCCGGCGCAAGAGACACCGGATCACCGGGTAGCAGCCTaGGATTGTAAAGATCTTCTTCTGCTTGACAGCTCTCTCCACGTA +
Preference number: 6 (lower is better)
Translates to: PAPPAQETPDHRVAA*DCKDLLLLDSSLHV
Trigger: TACGTGGAGAGAGCTGTCAAGCAGAAGAAGATCTTTACAATCCAAGGCTGCTACCCGGTGATCCGGTGTCTCTTGCGCCGGAGGGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000414814.5
ENST00000417065.5
ENST00000418745.5
ENST00000419081.5
ENST00000422738.5
ENST00000426827.5
ENST00000426895.9
ENST00000427220.5
ENST00000430390.5
ENST00000430718.5
ENST00000431204.5
ENST00000439814.5
ENST00000452597.5
ENST00000459758.5
CDS TCA 72 bp AGGGTGCTCGGCTACATGCCAGGCCCATGGGAGGGCTaGATGAGGAGTGGATCAACTAACAAACGGATGGGA +
Preference number: 6 (lower is better)
Translates to: RVLGYMPGPWEG*MRSGSTNKRMG
Trigger: TCCCATCCGTTTGTTAGTTGATCCACTCCTCATTCAGCCCTCCCATGGGCCTGGCATGTAGCCGAGCACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000455274.5
ENST00000473661.5
ENST00000496526.5
CDS TCA 72 bp TGTCCTCACAGCGCTGGACCTGAGTGTCGAGGTGCCTaGGTTCTGCCCCTTCGCTGTGGGGAAATGATAGAA +
Preference number: 6 (lower is better)
Translates to: CPHSAGPECRGA*VLPLRCGEMIE
Trigger: TTCTATCATTTCCCCACAGCGAAGGGGCAGAACTCAGGCACCTCGACACTCAGGTCCAGCGCTGTGAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482269.1
ENST00000492440.1
CDS GCA 72 bp TGCACTGAGTTGTCCAGGTTCTTCAGGGAGAAGGGTTaGCGTCCTTCATCACCACGGGGTTGCCGTTCACCA +
Preference number: 6 (lower is better)
Translates to: CTELSRFFREKG*RPSSPRGCRSP
Trigger: TGGTGAACGGCAACCCCGTGGTGATGAAGGACGGCAACCCTTCTCCCTGAAGAACCTGGACAACTCAGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473661.5
CDS GCA 72 bp CCTGTTTCTCTCCAATATGAGCCAGAGCTTCAGCCCTaGTCTGTCAGCCTGAGGTTCAGGCATAGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: PVSLQYEPELQP*SVSLRFRHRAG
Trigger: CCCAGCCCTATGCCTGAACCTCAGGCTGACAGAGCAGGGCTGAAGCTCTGGCTCATATTGGAGAGAAACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483051.5
ENST00000496526.5
CDS GCA 72 bp CCGAGAGGTGACTGCTTGAAGGCAAAGGCAGAATACTaGAGTGGGAAAAGCGTGGGCGCTGGAGAGAGCAAC +
Preference number: 6 (lower is better)
Translates to: PRGDCLKAKAEY*SGKSVGAGESN
Trigger: GTTGCTCTCTCCAGCGCCCACGCTTTTCCCACTGCAGTATTCTGCCTTTGCCTTCAAGCAGTCACCTCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493241.1
CDS CAA 90 bp CCAGCCCCTCCGGCGCAAGAGACACCGGATCACCGGGTAGCAGCCTaGGATTGTAAAGATCTTCTTCTTGACAGCTCTCTCCACGTAGAT +
Preference number: 6 (lower is better)
Translates to: PAPPAQETPDHRVAA*DCKDLLLDSSLHVD
Trigger: ATCTACGTGGAGAGAGCTGTCAAGAAGAAGATCTTTACAATCCAAGGCTGCTACCCGGTGATCCGGTGTCTCTTGCGCCGGAGGGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438596.5
CDS CAA 90 bp GGCTGGGTCTGCATCCCAGCTGTGCCCCTTCTGAGCTGTGCAACCTaGGGCAACTTCCTTAAACTTCCTGATACCTCGGCTGGAAAATGG +
Preference number: 6 (lower is better)
Translates to: GWVCIPAVPLLSCAT*GNFLKLPDTSAGKW
Trigger: CCATTTTCCAGCCGAGGTATCAGGAAGTTTAAGGAAGTTGCCCAAGGTTGCACAGCTCAGAAGGGGCACAGCTGGGATGCAGACCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493241.1
CDS TCA 72 bp TGCTCGGCTACATGCCAGGCCCATGGGAGGGCTGAATaGGGAGTGGATCAACTAACAAACGGATGGGAAGAC +
Preference number: 6 (lower is better)
Translates to: CSATCQAHGRAE*GVDQLTNGWED
Trigger: GTCTTCCCATCCGTTTGTTAGTTGATCCACTCCTCATTCAGCCCTCCCATGGGCCTGGCATGTAGCCGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000455274.5
ENST00000473661.5
ENST00000496526.5
CDS TCA 72 bp TGGAAGCAGCCCTGGGCCACCCTGCACTATTCAACTTaGGATGGGGCCCTACTGGGAAGGACAAAAAGGACA +
Preference number: 6 (lower is better)
Translates to: WKQPWATLHYST*DGALLGRTKRT
Trigger: TGTCCTTTTTGTCCTTCCCAGTAGGGCCCCATCTCAAGTTGAATAGTGCAGGGTGGCCCAGGGCTGCTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496526.5
CDS GCA 72 bp GGCATGAGTTCTCCAGGTGCTTCTGGATGGAGTTGTTaGACAGGTGCACTGAGCAGGAACCACTGTCTGAGG +
Preference number: 6 (lower is better)
Translates to: GMSSPGASGWSC*TGALSRNHCLR
Trigger: CCTCAGACAGTGGTTCCTGCTCAGTGCACCTGTGCAACAACTCCATCCAGAAGCACCTGGAGAACTCATGCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466245.1
CDS CAA 90 bp GCTGCTCTGAGGGCGCTAGTTACGGGGGCCGCAGTAGTAAGTGCTTaGTGCATAGTCTCAGTTAACCATCCCAGTGTCTGTGTGCTCTTC +
Preference number: 6 (lower is better)
Translates to: AALRALVTGAAVVSA*CIVSVNHPSVCVLF
Trigger: GAAGAGCACACAGACACTGGGATGGTTAACTGAGACTATGCACAAAGCACTTACTACTGCGGCCCCCGTAACTAGCGCCCTCAGAGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496526.5
CDS TCA 72 bp GCCAGAGGACCGGGAAACCCAGGCAATGCTGTCCTGTaGGGGTTGTTGAGTGACCAGCTGCTATATCCTATT +
Preference number: 6 (lower is better)
Translates to: ARGPGNPGNAVL*GLLSDQLLYPI
Trigger: AATAGGATATAGCAGCTGGTCACTCAACAACCCTCACAGGACAGCATTGCCTGGGTTTCCCGGTCCTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414814.5
ENST00000452597.5
CDS TCA 72 bp CTATGGTGCTGGGCACAGTGGTGCATTTCTCTCTGGTaGCACCTGCATGTTAGGAGCTGGGCCCTGCTTATA +
Preference number: 6 (lower is better)
Translates to: LWCWAQWCISLW*HLHVRSWALLI
Trigger: TATAAGCAGGGCCCAGCTCCTAACATGCAGGTGTCACCAGAGAGAAATGCACCACTGTGCCCAGCACCATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455274.5
CDS GCA 72 bp TGCCCCTTATCCTGGCACACAACCAAGCCTTCCTTGTaGATGACACACACAAGAGACAGCAATGGGGGAGTC +
Preference number: 6 (lower is better)
Translates to: CPLSWHTTKPSL*MTHTRDSNGGV
Trigger: GACTCCCCCATTGCTGTCTCTTGTGTGTGTCATGCACAAGGAAGGCTTGGTTGTGTGCCAGGATAAGGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000455274.5
ENST00000473661.5
ENST00000496526.5
CDS CCA 72 bp CTCACTTGTCCAGGTTCTTCAGGGAGAAGGGCTGCGTaGAAAAGCGGATATAGCTGTCGCGGTAGAACCACA +
Preference number: 6 (lower is better)
Translates to: LTCPGSSGRRAA*KSGYSCRGRTT
Trigger: TGTGGTTCTACCGCGACAGCTATATCCGCTTTTCCACGCAGCCCTTCTCCCTGAAGAACCTGGACAAGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492440.1
CDS CCA 72 bp GGAAGTTGTCCAGGTTCTTCAGGGAGAAGGGCTGCGTaGAAAAGCGGATATAGCTGTCGCGGTAGAACCACA +
Preference number: 6 (lower is better)
Translates to: GSCPGSSGRRAA*KSGYSCRGRTT
Trigger: TGTGGTTCTACCGCGACAGCTATATCCGCTTTTCCACGCAGCCCTTCTCCCTGAAGAACCTGGACAACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496526.5
CDS CAA 72 bp GACTTCCACTCAGACTTCACCACCAGCTTGAGAACGTaGCGGGCAGCAGTCAGCCAGAAGTCCTCTATGAAG +
Preference number: 6 (lower is better)
Translates to: DFHSDFTTSLRT*RAAVSQKSSMK
Trigger: CTTCATAGAGGACTTCTGGCTGACTGCTGCCCGCAACGTTCTCAAGCTGGTGGTGAAGTCTGAGTGGAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310252.11
ENST00000422738.5
ENST00000426895.9
ENST00000443148.5
CDS CAA 72 bp CCGGCGCAAGAGACACCGGATCACCGGGTAGCAGCCTaGGATTGTAAAGATCTTCTTCTGCTTGACAGCTCT +
Preference number: 6 (lower is better)
Translates to: PAQETPDHRVAA*DCKDLLLLDSS
Trigger: AGAGCTGTCAAGCAGAAGAAGATCTTTACAATCCAAGGCTGCTACCCGGTGATCCGGTGTCTCTTGCGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000414814.5
ENST00000417065.5
ENST00000418745.5
ENST00000419081.5
ENST00000422738.5
ENST00000426827.5
ENST00000426895.9
ENST00000427220.5
ENST00000430390.5
ENST00000430718.5
ENST00000431204.5
ENST00000439814.5
ENST00000452597.5
ENST00000459758.5
CDS CAA 72 bp CCGGCGCAAGAGACACCGGATCACCGGGTAGCAGCCTaGGATTGTAAAGATCTTCTTCTTGACAGCTCTCTC +
Preference number: 6 (lower is better)
Translates to: PAQETPDHRVAA*DCKDLLLDSSL
Trigger: GAGAGAGCTGTCAAGAAGAAGATCTTTACAATCCAAGGCTGCTACCCGGTGATCCGGTGTCTCTTGCGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438596.5
CDS TCA 72 bp CGGGAAACCCAGGCAATGCTGTCCTGTGAGGGTTGTTaGGTGACCAGCTGCTATATCCTATTAGTCACCCAG +
Preference number: 6 (lower is better)
Translates to: RETQAMLSCEGC*VTSCYILLVTQ
Trigger: CTGGGTGACTAATAGGATATAGCAGCTGGTCACTCAACAACCCTCACAGGACAGCATTGCCTGGGTTTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414814.5
ENST00000452597.5
CDS GCA 72 bp AGCTGTTCTCAGGCCATGTGTAAAGCCCAGTTTCACTaGTTCCTCCTCCTCAGAGACCTGAACTCCTCACAG +
Preference number: 6 (lower is better)
Translates to: SCSQAMCKAQFH*FLLLRDLNSSQ
Trigger: CTGTGAGGAGTTCAGGTCTCTGAGGAGGAGGAAGCAGTGAAACTGGGCTTTACACATGGCCTGAGAACAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000455274.5
ENST00000473661.5
ENST00000496526.5
CDS GCA 72 bp GCGCTAGTTACGGGGGCCGCAGTAGTAAGTGCTTTGTaGATAGTCTCAGTTAACCATCCCAGTGTCTGTGTG +
Preference number: 6 (lower is better)
Translates to: ALVTGAAVVSAL*IVSVNHPSVCV
Trigger: CACACAGACACTGGGATGGTTAACTGAGACTATGCACAAAGCACTTACTACTGCGGCCCCCGTAACTAGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496526.5
CDS CAA 72 bp TTGTGCCCCTTATCCTGGCACACAACCAAGCCTTCCTaGTGCATGACACACACAAGAGACAGCAATGGGGGA +
Preference number: 6 (lower is better)
Translates to: LCPLSWHTTKPS*CMTHTRDSNGG
Trigger: TCCCCCATTGCTGTCTCTTGTGTGTGTCATGCACAAGGAAGGCTTGGTTGTGTGCCAGGATAAGGGGCACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000455274.5
ENST00000473661.5
ENST00000496526.5
CDS TCA 72 bp CCACAGTACTTACCTGAGGCCTCTTCCTCTACTGCCTaGATAGGGTATGACTTCCACTCAGACTTCACCACC +
Preference number: 6 (lower is better)
Translates to: PQYLPEASSSTA*IGYDFHSDFTT
Trigger: GGTGGTGAAGTCTGAGTGGAAGTCATACCCTATTCAGGCAGTAGAGGAAGAGGCCTCAGGTAAGTACTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383827.5
ENST00000473661.5
ENST00000496526.5
CDS TCA 72 bp GAGGTCAGGAGATCGAGACCATCCTGGCTAACACAGTaGAACCCCGTCTCATCAGAGCATGTGTTCCATCTA +
Preference number: 6 (lower is better)
Translates to: EVRRSRPSWLTQ*NPVSSEHVFHL
Trigger: TAGATGGAACACATGCTCTGATGAGACGGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496246.5
CDS CCA 72 bp GTTCACTGCTATACCCCAAGTGCCCAGAACAGTGCATaGCACAAGGTACACACTCGGTCAAATCTGTTGGAG +
Preference number: 6 (lower is better)
Translates to: VHCYTPSAQNSA*HKVHTRSNLLE
Trigger: CTCCAACAGATTTGACCGAGTGTGTACCTTGTGCCATGCACTGTTCTGGGCACTTGGGGTATAGCAGTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492440.1
CDS TCA 72 bp AAGTGCTGGACATGTGTTAGTTCTTTCCCCGAGAGGTaGCTGCTTGAAGGCAAAGGCAGAATACTGCAGTGG +
Preference number: 6 (lower is better)
Translates to: KCWTCVSSFPER*LLEGKGRILQW
Trigger: CCACTGCAGTATTCTGCCTTTGCCTTCAAGCAGTCACCTCTCGGGGAAAGAACTAACACATGTCCAGCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493241.1
CDS GCA 72 bp GCTGGACATGTGTTAGTTCTTTCCCCGAGAGGTGACTaGTTGAAGGCAAAGGCAGAATACTGCAGTGGGAAA +
Preference number: 6 (lower is better)
Translates to: AGHVLVLSPRGD*LKAKAEYCSGK
Trigger: TTTCCCACTGCAGTATTCTGCCTTTGCCTTCAAGCAGTCACCTCTCGGGGAAAGAACTAACACATGTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493241.1
CDS TCA 72 bp AAGACCCCGTGCACATCTACAGACCTGACTCACCCCTaGACATCGCAGTGCTCTGAAGATTCTGATATACAA +
Preference number: 6 (lower is better)
Translates to: KTPCTSTDLTHP*TSQCSEDSDIQ
Trigger: TTGTATATCAGAATCTTCAGAGCACTGCGATGTTCAGGGGTGAGTCAGGTCTGTAGATGTGCACGGGGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383827.5
ENST00000455274.5
ENST00000473661.5
ENST00000496526.5
CDS GCA 72 bp TTGGTGGCACAGTCCATGCTCTTAGTGACTATGCTATaGCAAGAACCAAGAAAAGTGGCCCAGACCCTATCA +
Preference number: 6 (lower is better)
Translates to: LVAQSMLLVTML*QEPRKVAQTLS
Trigger: TGATAGGGTCTGGGCCACTTTTCTTGGTTCTTGGCATAGCATAGTCACTAAGAGCATGGACTGTGCCACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602338.1
CDS CAA 90 bp CTTGTGTTCTTGCTTGCCTGTTTCTCCCTGCTAGAATGTAAGCCCTaGAGAGCTGGGATCTTGTTTTGTTCACTGCTATACCCCAAGTGC +
Preference number: 6 (lower is better)
Translates to: LVFLLACFSLLECKP*RAGILFCSLLYPKC
Trigger: GCACTTGGGGTATAGCAGTGAACAAAACAAGATCCCAGCTCTCAAGGGCTTACATTCTAGCAGGGAGAAACAGGCAAGCAAGAACACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492440.1
CDS GCA 72 bp CCAGACCCCAAATCTGACCTGACTTGGATCATATTCTaGCTTCAGAATCTGGCTTGGACCCATTGTCTGATT +
Preference number: 6 (lower is better)
Translates to: PDPKSDLTWIIF*LQNLAWTHCLI
Trigger: AATCAGACAATGGGTCCAAGCCAGATTCTGAAGGCAGAATATGATCCAAGTCAGGTCAGATTTGGGGTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483051.5
ENST00000496526.5
CDS GCA 72 bp TTTTGTTCACTGCTATACCCCAAGTGCCCAGAACAGTaGATGGCACAAGGTACACACTCGGTCAAATCTGTT +
Preference number: 6 (lower is better)
Translates to: FCSLLYPKCPEQ*MAQGTHSVKSV
Trigger: AACAGATTTGACCGAGTGTGTACCTTGTGCCATGCACTGTTCTGGGCACTTGGGGTATAGCAGTGAACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492440.1
CDS CAA 72 bp AGGTTTTCACATGACCAGATTCAAACAACTTGGAAGTaGTCCAGGTTCTTCAGGGAGAAGGGCTGCGTGGAA +
Preference number: 6 (lower is better)
Translates to: RFSHDQIQTTWK*SRFFREKGCVE
Trigger: TTCCACGCAGCCCTTCTCCCTGAAGAACCTGGACAACTTCCAAGTTGTTTGAATCTGGTCATGTGAAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496526.5
CDS CAA 90 bp GGCTTAAATAGGTTTTCACATGACCAGATTCAAACAACTTGGAAGTaGTCCAGGTTCTTCAGGGAGAAGGGCTGCGTGGAAAAGCGGATA +
Preference number: 6 (lower is better)
Translates to: GLNRFSHDQIQTTWK*SRFFREKGCVEKRI
Trigger: TATCCGCTTTTCCACGCAGCCCTTCTCCCTGAAGAACCTGGACAACTTCCAAGTTGTTTGAATCTGGTCATGTGAAAACCTATTTAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496526.5
CDS GCA 72 bp GAATTAACATCCACACAACACACACTTTGGGTAATGTaGTGTCCATTTGGTGGCACAGTCCATGCTCTTAGT +
Preference number: 6 (lower is better)
Translates to: ELTSTQHTLWVM*CPFGGTVHALS
Trigger: ACTAAGAGCATGGACTGTGCCACCAAATGGACAGCACATTACCCAAAGTGTGTGTTGTGTGGATGTTAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602338.1
CDS CCA 72 bp CTTCCTGTAGAATTAACATCCACACAACACACACTTTaGGTAATGTGCTGTCCATTTGGTGGCACAGTCCAT +
Preference number: 6 (lower is better)
Translates to: LPVELTSTQHTL*VMCCPFGGTVH
Trigger: ATGGACTGTGCCACCAAATGGACAGCACATTACCCAAAGTGTGTGTTGTGTGGATGTTAATTCTACAGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602338.1
CDS CAA 72 bp ACTTCCTGTAGAATTAACATCCACACAACACACACTTaGGGTAATGTGCTGTCCATTTGGTGGCACAGTCCA +
Preference number: 6 (lower is better)
Translates to: TSCRINIHTTHT*GNVLSIWWHSP
Trigger: TGGACTGTGCCACCAAATGGACAGCACATTACCCAAAGTGTGTGTTGTGTGGATGTTAATTCTACAGGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602338.1
CDS CCA 72 bp TTAAATAGGTTTTCACATGACCAGATTCAAACAACTTaGAAGTTGTCCAGGTTCTTCAGGGAGAAGGGCTGC +
Preference number: 6 (lower is better)
Translates to: LNRFSHDQIQTT*KLSRFFREKGC
Trigger: GCAGCCCTTCTCCCTGAAGAACCTGGACAACTTCCAAGTTGTTTGAATCTGGTCATGTGAAAACCTATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496526.5
CDS CAA 72 bp CCTGACTTGGATCATATTCTGCCTTCAGAATCTGGCTaGGACCCATTGTCTGATTTGTTTCTTCTGTTCATC +
Preference number: 6 (lower is better)
Translates to: PDLDHILPSESG*DPLSDLFLLFI
Trigger: GATGAACAGAAGAAACAAATCAGACAATGGGTCCAAGCCAGATTCTGAAGGCAGAATATGATCCAAGTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483051.5
ENST00000496526.5
CDS TCA 72 bp CAGCTGCTATATCCTATTAGTCACCCAGTTTCACTGTaGGCACCTTTAACATTCACTGCAAAGCTAGAACAT +
Preference number: 6 (lower is better)
Translates to: QLLYPISHPVSL*APLTFTAKLEH
Trigger: ATGTTCTAGCTTTGCAGTGAATGTTAAAGGTGCTCACAGTGAAACTGGGTGACTAATAGGATATAGCAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414814.5
ENST00000452597.5
CDS TCA 72 bp TCTGTTCATCACCTACTTTTGATACTTATTCTGTCCTaGGAACCAGACTGTGTCCTAGTTCAGATTCTGAAT +
Preference number: 6 (lower is better)
Translates to: SVHHLLLILILS*EPDCVLVQILN
Trigger: ATTCAGAATCTGAACTAGGACACAGTCTGGTTCTCAGGACAGAATAAGTATCAAAAGTAGGTGATGAACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483051.5
ENST00000496526.5