RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTLL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000120440

Ensembl transcript IDs: ENST00000239587.10, ENST00000512917.1, ENST00000515138.1, ENST00000649884.1

Found 304 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATGGTGACAAGGCCAAGGGGCCACTATTTAAATACAGCCCAAAGATaGCCCCACAGGGAGCTCTTTGGTGCAAAGTCTGATTTCAAGCCC +
Preference number: 1 (lower is better)
Translates to: MVTRPRGHYLNTAQR*PHRELFGAKSDFKP
Trigger: GGGCTTGAAATCAGACTTTGCACCAAAGAGCTCCCTGTGGGGGCATCTTTGGGCTGTATTTAAATAGTGGCCCCTTGGCCTTGTCACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239587.10
3UTR GCA 90 bp GCAGGAATGACAGCATACTTTGATCTGGGAGGCCATGACCTCACATaGTGTGATGGTAAACAAATGGTGACAAGGCCAAGGGGCCACTAT +
Preference number: 1 (lower is better)
Translates to: AGMTAYFDLGGHDLT*CDGKQMVTRPRGHY
Trigger: ATAGTGGCCCCTTGGCCTTGTCACCATTTGTTTACCATCACAGCATGTGAGGTCATGGCCTCCCAGATCAAAGTATGCTGTCATTCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239587.10
3UTR TCA 90 bp AATTTTTATGTCTTAGGACTGCAGATGCTTTTTATGTGGCAGGAATaGCAGCATACTTTGATCTGGGAGGCCATGACCTCACATGCTGTG +
Preference number: 1 (lower is better)
Translates to: NFYVLGLQMLFMWQE*QHTLIWEAMTSHAV
Trigger: CACAGCATGTGAGGTCATGGCCTCCCAGATCAAAGTATGCTGTCATTCCTGCCACATAAAAAGCATCTGCAGTCCTAAGACATAAAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000239587.10
3UTR-3UTR TCA 90 bp GCAGGAATGACAGCATACTTTGATCTGGGAGGCCATGACCTCACATGCTGTGATGCACAGGTAGGGACTTaGACTATTGCTTTCTCTAGG +
Preference number: 2 (lower is better)
Translates to: AGMTAYFDLGGHDLTCCDAQVGT*TIAFSR
Trigger: CCTAGAGAAAGCAATAGTTCAAGTCCCTACCTGTGC...ATCACAGCATGTGAGGTCATGGCCTCCCAGATCAAAGTATGCTGTCATTCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239587.10
3UTR-3UTR GCA 90 bp TTGTGCAACCATCACCTCTATATAGTTCCAGAACATTTCTGTCACCCCAAAGGGAATACAGCCCAAAGATaGCCCCACAGGGAGCTCTTT +
Preference number: 2 (lower is better)
Translates to: LCNHHLYIVPEHFCHPKGNTAQR*PHRELF
Trigger: AAAGAGCTCCCTGTGGGGGCATCTTTGGGCTGTATT...CCCTTTGGGGTGACAGAAATGTTCTGGAACTATATAGAGGTGATGGTTGCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239587.10
3UTR-3UTR TCA 90 bp GCCACCAATCTGCTTTTGATGGATTTGCCAATTCTGACATTCCATATCAACGGAATGGTAAACAAATGGTaGCAAGGCCAAGGGGCCACT +
Preference number: 2 (lower is better)
Translates to: ATNLLLMDLPILTFHINGMVNKW*QGQGAT
Trigger: AGTGGCCCCTTGGCCTTGTCACCATTTGTTTACCAT...TCCGTTGATATGGAATGTCAGAATTGGCAAATCCATCAAAAGCAGATTGGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239587.10
3UTR-3UTR CCA 90 bp AGCCCAGGATTTGTAAACAACAGAGTCATTAGGGCTTTCAGTGATTTATCTCACAGCACATTCAATTACTaGTGGGAGGCTGTGTGGTAT +
Preference number: 2 (lower is better)
Translates to: SPGFVNNRVIRAFSDLSHSTFNY*WEAVWY
Trigger: ATACCACACAGCCTCCCACCAGTAATTGAATGTGCT...GTGAGATAAATCACTGAAAGCCCTAATGACTCTGTTGTTTACAAATCCTGGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239587.10
3UTR-3UTR TCA 90 bp CAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTGCACAGGTAGGGACTTaGACTATTGCTTTCTCTAGG +
Preference number: 2 (lower is better)
Translates to: QSCYIYTYGHIFSPNVIVAQVGT*TIAFSR
Trigger: CCTAGAGAAAGCAATAGTTCAAGTCCCTACCTGTGC...AACTATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
3UTR-3UTR TCA 90 bp TGTCAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATAGCACAGGTAGGGACTTaGACTATTGCTTTCTCTAGG +
Preference number: 2 (lower is better)
Translates to: CQSCYIYTYGHIFSPNVIAQVGT*TIAFSR
Trigger: CCTAGAGAAAGCAATAGTTCAAGTCCCTACCTGTGC...TATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
3UTR-3UTR TCA 90 bp CCCCTAAGCCACCAATCTGCTTTTGATGGATTTGCCAATTCTGACATTCCATATTTCTTTCAAGACACCTaGGCAAATAAACATGGGATG +
Preference number: 2 (lower is better)
Translates to: PLSHQSAFDGFANSDIPYFFQDT*ANKHGM
Trigger: CATCCCATGTTTATTTGCTCAGGTGTCTTGAAAGAA...ATATGGAATGTCAGAATTGGCAAATCCATCAAAAGCAGATTGGTGGCTTAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239587.10
3UTR-3UTR GCA 90 bp GGTAAACAAATGGTGACAAGGCCAAGGGGCCACTATTTAAATACAGCCCAAAGACACTTGAACATATTGTaGTTTGTCAGAGCTGTTATA +
Preference number: 2 (lower is better)
Translates to: GKQMVTRPRGHYLNTAQRHLNIL*FVRAVI
Trigger: TATAACAGCTCTGACAAAGCACAATATGTTCAAGTG...TCTTTGGGCTGTATTTAAATAGTGGCCCCTTGGCCTTGTCACCATTTGTTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239587.10
3UTR GCA 72 bp AGGCCAAGGGGCCACTATTTAAATACAGCCCAAAGATaGCCCCACAGGGAGCTCTTTGGTGCAAAGTCTGAT +
Preference number: 3 (lower is better)
Translates to: RPRGHYLNTAQR*PHRELFGAKSD
Trigger: ATCAGACTTTGCACCAAAGAGCTCCCTGTGGGGGCATCTTTGGGCTGTATTTAAATAGTGGCCCCTTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239587.10
3UTR GCA 72 bp ACAGCATACTTTGATCTGGGAGGCCATGACCTCACATaGTGTGATGGTAAACAAATGGTGACAAGGCCAAGG +
Preference number: 3 (lower is better)
Translates to: TAYFDLGGHDLT*CDGKQMVTRPR
Trigger: CCTTGGCCTTGTCACCATTTGTTTACCATCACAGCATGTGAGGTCATGGCCTCCCAGATCAAAGTATGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239587.10
3UTR-3UTR CAA 90 bp TTGTGCAACCATCACCTCTATATAGTTCCAGAACATTTCTGTCACCCCAAAGGGCCCACAGGGAGCTCTTaGGTGCAAAGTCTGATTTCA +
Preference number: 3 (lower is better)
Translates to: LCNHHLYIVPEHFCHPKGPTGSS*VQSLIS
Trigger: TGAAATCAGACTTTGCACCAAAGAGCTCCCTGTGGG...CCCTTTGGGGTGACAGAAATGTTCTGGAACTATATAGAGGTGATGGTTGCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239587.10
3UTR TCA 72 bp GTCTTAGGACTGCAGATGCTTTTTATGTGGCAGGAATaGCAGCATACTTTGATCTGGGAGGCCATGACCTCA +
Preference number: 3 (lower is better)
Translates to: VLGLQMLFMWQE*QHTLIWEAMTS
Trigger: TGAGGTCATGGCCTCCCAGATCAAAGTATGCTGTCATTCCTGCCACATAAAAAGCATCTGCAGTCCTAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239587.10
3UTR-3UTR CAA 90 bp ACCTACTGGAATTTTTATGTCTTAGGACTGCAGATGCTTTTTATGTGGCAGGAAAACTCCTGGCTTCTTTaGTACTGTTTTCACCTAATA +
Preference number: 3 (lower is better)
Translates to: TYWNFYVLGLQMLFMWQENSWLL*YCFHLI
Trigger: TATTAGGTGAAAACAGTACAAAAGAAGCCAGGAGTT...TTCCTGCCACATAAAAAGCATCTGCAGTCCTAAGACATAAAAATTCCAGTAGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR CCA 90 bp GGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGCTCCAGTGTTGGTGTTaGGCGGCCTCGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GHIFSPNVIVNMLVAQVGLQCWC*AASPGR
Trigger: CCTCCCAGGCGAGGCCGCCCAACACCAACACTGGAG...CCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239587.10
ENST00000515138.1
CDS-3UTR TCA 90 bp GGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGGGGACGCGTAGGGCATaGGTGTCTTGTGAGGCGTGT +
Preference number: 4 (lower is better)
Translates to: GHIFSPNVIVNMLVAQVGGTRRA*VSCEAC
Trigger: ACACGCCTCACAAGACACTCATGCCCTACGCGTCCC...CCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp GCAGGAATGACAGCATACTTTGATCTGGGAGGCCATGACCTCACATGCTGTGATGCGCCTGGCTTTGTGTaGAGGAACACAGGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: AGMTAYFDLGGHDLTCCDAPGFV*RNTGPA
Trigger: GGCGGGACCTGTGTTCCTCCACACAAAGCCAGGCGC...ATCACAGCATGTGAGGTCATGGCCTCCCAGATCAAAGTATGCTGTCATTCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR CCA 90 bp CACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGACTCTCCAGTGTTGGTGTTaGGCGGCCTCGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: HIFSPNVIVNMLVAQVGTLQCWC*AASPGR
Trigger: CCTCCCAGGCGAGGCCGCCCAACACCAACACTGGAG...AGTCCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239587.10
ENST00000515138.1
CDS-3UTR GCA 90 bp CACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGACTAGGCCTGCAGGCGGCTaGTCAGTGTGGTTTGCCTCG +
Preference number: 4 (lower is better)
Translates to: HIFSPNVIVNMLVAQVGTRPAGG*SVWFAS
Trigger: CGAGGCAAACCACACTGAGCAGCCGCCTGCAGGCCT...AGTCCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239587.10
ENST00000515138.1
CDS-3UTR GCA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGCCGAGATGGCGCCACTaGACTCCAGCCTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQPRWRH*TPAWRQ
Trigger: CTGTCGCCAGGCTGGAGTGCAGTGGCGCCATCTCGG...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515138.1
CDS-3UTR CCA 90 bp CACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGACTGCGCCTGGCTTTGTGTaGAGGAACACAGGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: HIFSPNVIVNMLVAQVGTAPGFV*RNTGPA
Trigger: GGCGGGACCTGTGTTCCTCCACACAAAGCCAGGCGC...AGTCCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp GGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGGTGGTTCCAGGGTGGTaGTTTAGCTGCTGCCACGGT +
Preference number: 4 (lower is better)
Translates to: GHIFSPNVIVNMLVAQVGVVPGW*FSCCHG
Trigger: ACCGTGGCAGCAGCTAAACCACCACCCTGGAACCAC...CCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR TCA 90 bp GGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGCTTCAAGAGGGCCCCTaGAGGTTCATCTTCCGCCAT +
Preference number: 4 (lower is better)
Translates to: GHIFSPNVIVNMLVAQVGLQEGP*RFIFRH
Trigger: ATGGCGGAAGATGAACCTTCAGGGGCCCTCTTGAAG...CCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR TCA 90 bp CACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGACTGGGACGCGTAGGGCATaGGTGTCTTGTGAGGCGTGT +
Preference number: 4 (lower is better)
Translates to: HIFSPNVIVNMLVAQVGTGTRRA*VSCEAC
Trigger: ACACGCCTCACAAGACACTCATGCCCTACGCGTCCC...AGTCCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR GCA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGAGGCCTGCAGGCGGCTaGTCAGTGTGGTTTGCCTCG +
Preference number: 4 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQRPAGG*SVWFAS
Trigger: CGAGGCAAACCACACTGAGCAGCCGCCTGCAGGCCT...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239587.10
ENST00000515138.1
CDS-3UTR CCA 90 bp TTAAGGGTAAAGGCTGGGGTGGTGGTTCTCAAAGATCTTGATGATATTCCTGGGGCGCCTGGCTTTGTGTaGAGGAACACAGGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: LRVKAGVVVLKDLDDIPGAPGFV*RNTGPA
Trigger: GGCGGGACCTGTGTTCCTCCACACAAAGCCAGGCGC...CCCAGGAATATCATCAAGATCTTTGAGAACCACCACCCCAGCCTTTACCCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512917.1
CDS-3UTR CCA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGCGCCTGGCTTTGTGTaGAGGAACACAGGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQAPGFV*RNTGPA
Trigger: GGCGGGACCTGTGTTCCTCCACACAAAGCCAGGCGC...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR TCA 90 bp CACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGACTCGAACGTCAGGGGGATaGACTGGTACAGGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: HIFSPNVIVNMLVAQVGTRTSGG*TGTGKC
Trigger: GCACTTCCCTGTACCAGTTCATCCCCCTGACGTTCG...AGTCCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR TCA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGGCATGAGTGTCTTGTaGGGCGTGTGCCTGCTCCGT +
Preference number: 4 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQGMSVL*GVCLLR
Trigger: ACGGAGCAGGCACACGCCTCACAAGACACTCATGCC...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR TCA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGAGCTTTGCCACGGTCTaGCAGGACACACGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQSFATV*QDTRGG
Trigger: ACCTCCCCGTGTGTCCTGTCAGACCGTGGCAAAGCT...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR GCA 90 bp TGTGATGGTAAACAAATGGTGACAAGGCCAAGGGGCCACTATTTAAATACAGCCTCCAGGAGGACGCTTTaGACCACAGCCGGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: CDGKQMVTRPRGHYLNTASRRTL*TTAGVV
Trigger: GACCACCCCGGCTGTGGTGCAAAGCGTCCTCCTGGA...GGCTGTATTTAAATAGTGGCCCCTTGGCCTTGTCACCATTTGTTTACCATCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR GCA 90 bp CACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGACTTGTGAGGCGTGTGCCTaGTCCGTAACTTGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: HIFSPNVIVNMLVAQVGTCEACA*SVTWAC
Trigger: GCAAGCCCAAGTTACGGAGCAGGCACACGCCTCACA...AGTCCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp CACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGACTGTGGTTCCAGGGTGGTaGTTTAGCTGCTGCCACGGT +
Preference number: 4 (lower is better)
Translates to: HIFSPNVIVNMLVAQVGTVVPGW*FSCCHG
Trigger: ACCGTGGCAGCAGCTAAACCACCACCCTGGAACCAC...AGTCCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR TCA 90 bp GGTAAACAAATGGTGACAAGGCCAAGGGGCCACTATTTAAATACAGCCCAAAGAGGCATGAGTGTCTTGTaGGGCGTGTGCCTGCTCCGT +
Preference number: 4 (lower is better)
Translates to: GKQMVTRPRGHYLNTAQRGMSVL*GVCLLR
Trigger: ACGGAGCAGGCACACGCCTCACAAGACACTCATGCC...TCTTTGGGCTGTATTTAAATAGTGGCCCCTTGGCCTTGTCACCATTTGTTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR TCA 90 bp GGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGGGCAGGAGAATGACTTaGACCTATGAGGCGGAAGTT +
Preference number: 4 (lower is better)
Translates to: GHIFSPNVIVNMLVAQVGGRRMT*TYEAEV
Trigger: AACTTCCGCCTCATAGGTTCAAGTCATTCTCCTGCC...CCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515138.1
CDS-3UTR GCA 90 bp GGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGTCCGTAACTTGGGCTTaGTTTGTGGCATCTCCCTTG +
Preference number: 4 (lower is better)
Translates to: GHIFSPNVIVNMLVAQVGSVTWA*FVASPL
Trigger: CAAGGGAGATGCCACAAAGCAAGCCCAAGTTACGGA...CCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR GCA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGTGTGAGGCGTGTGCCTaGTCCGTAACTTGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQCEACA*SVTWAC
Trigger: GCAAGCCCAAGTTACGGAGCAGGCACACGCCTCACA...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR GCA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGGGGATCTGGAGCTTTaGCACGGTCTGACAGGACAC +
Preference number: 4 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQGDLEL*HGLTGH
Trigger: GTGTCCTGTCAGACCGTGGCAAAGCTCCAGATCCCC...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp GCCACCAATCTGCTTTTGATGGATTTGCCAATTCTGACATTCCATATCAACGGATTGGGCGGCCTCGCCTaGGAGGGATGGAAACACCTG +
Preference number: 4 (lower is better)
Translates to: ATNLLLMDLPILTFHINGLGGLA*EGWKHL
Trigger: CAGGTGTTTCCATCCCTCCCAGGCGAGGCCGCCCAA...TCCGTTGATATGGAATGTCAGAATTGGCAAATCCATCAAAAGCAGATTGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR CCA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGCACCACAGCCGGGGTaGTCTCGTCAACGCGAAAAA +
Preference number: 4 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQAPQPG*SRQREK
Trigger: TTTTTCGCGTTGACGAGACCACCCCGGCTGTGGTGC...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp GGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGAGCAAAGGGGACAGATaGTGCAATGGCGAGAATGGT +
Preference number: 4 (lower is better)
Translates to: GHIFSPNVIVNMLVAQVGSKGDR*CNGENG
Trigger: ACCATTCTCGCCATTGCACCATCTGTCCCCTTTGCT...CCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR TCA 90 bp CATAATCGTAGTGTAGCACATTCAATTACTGGTGGGAGGCTGTGTGGTATTTGTGGGACGCGTAGGGCATaGGTGTCTTGTGAGGCGTGT +
Preference number: 4 (lower is better)
Translates to: HNRSVAHSITGGRLCGICGTRRA*VSCEAC
Trigger: ACACGCCTCACAAGACACTCATGCCCTACGCGTCCC...ACAAATACCACACAGCCTCCCACCAGTAATTGAATGTGCTACACTACGATTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR TCA 90 bp CCCCTAAGCCACCAATCTGCTTTTGATGGATTTGCCAATTCTGACATTCCATATAGCTTTGCCACGGTCTaGCAGGACACACGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: PLSHQSAFDGFANSDIPYSFATV*QDTRGG
Trigger: ACCTCCCCGTGTGTCCTGTCAGACCGTGGCAAAGCT...ATATGGAATGTCAGAATTGGCAAATCCATCAAAAGCAGATTGGTGGCTTAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR TCA 90 bp GGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGGCACAGGTAGGGACTTaGACTATTGCTTTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: GHIFSPNVIVNMLVAQVGAQVGT*TIAFSR
Trigger: CCTAGAGAAAGCAATAGTTCAAGTCCCTACCTGTGC...CCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR TCA 90 bp GCAGGAATGACAGCATACTTTGATCTGGGAGGCCATGACCTCACATGCTGTGATATGGTAAACAAATGGTaGCAAGGCCAAGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: AGMTAYFDLGGHDLTCCDMVNKW*QGQGAT
Trigger: AGTGGCCCCTTGGCCTTGTCACCATTTGTTTACCAT...ATCACAGCATGTGAGGTCATGGCCTCCCAGATCAAAGTATGCTGTCATTCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR GCA 90 bp GGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGTGGTGGTTTAGCTGCTaGCACGGTTTAACACTGTTG +
Preference number: 4 (lower is better)
Translates to: GHIFSPNVIVNMLVAQVGWWFSC*HGLTLL
Trigger: CAACAGTGTTAAACCGTGGCAGCAGCTAAACCACCA...CCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR GCA 90 bp CACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGACTGGGTGGTGGTTTAGCTaGTGCCACGGTTTAACACTG +
Preference number: 4 (lower is better)
Translates to: HIFSPNVIVNMLVAQVGTGWWFS*CHGLTL
Trigger: CAGTGTTAAACCGTGGCAGCAGCTAAACCACCACCC...AGTCCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp GGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGTGTGCTTCAGGTGTTTaGCCAAACAGTCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: GHIFSPNVIVNMLVAQVGCASGV*PNSLSW
Trigger: CCAGGAAAGACTGTTTGGCCAAACACCTGAAGCACA...CCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp TGTGATGGTAAACAAATGGTGACAAGGCCAAGGGGCCACTATTTAAATACAGCCCACACGGGGAGGTCTTaGTCTTGCAGGAGTGCGACT +
Preference number: 4 (lower is better)
Translates to: CDGKQMVTRPRGHYLNTAHTGRS*SCRSAT
Trigger: AGTCGCACTCCTGCAAGACCAAGACCTCCCCGTGTG...GGCTGTATTTAAATAGTGGCCCCTTGGCCTTGTCACCATTTGTTTACCATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR CCA 90 bp TTAAGGGTAAAGGCTGGGGTGGTGGTTCTCAAAGATCTTGATGATATTCCTGGGATCGAACCCAGCGCCTaGCTTTGTGTGGAGGAACAC +
Preference number: 4 (lower is better)
Translates to: LRVKAGVVVLKDLDDIPGIEPSA*LCVEEH
Trigger: GTGTTCCTCCACACAAAGCCAGGCGCTGGGTTCGAT...CCCAGGAATATCATCAAGATCTTTGAGAACCACCACCCCAGCCTTTACCCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512917.1
CDS-3UTR TCA 90 bp TATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACGAACGTCAGGGGGATaGACTGGTACAGGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: YTYGHIFSPNVIVNMLVARTSGG*TGTGKC
Trigger: GCACTTCCCTGTACCAGTTCATCCCCCTGACGTTCG...TGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR TCA 90 bp CACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGACTTGGCATCTCCCTTGTTaGCAGATGAAAATCCTGCCC +
Preference number: 4 (lower is better)
Translates to: HIFSPNVIVNMLVAQVGTWHLPC*QMKILP
Trigger: GGGCAGGATTTTCATCTGTCAACAAGGGAGATGCCA...AGTCCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR GCA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGGGTGGTGGTTTAGCTaGTGCCACGGTTTAACACTG +
Preference number: 4 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQGWWFS*CHGLTL
Trigger: CAGTGTTAAACCGTGGCAGCAGCTAAACCACCACCC...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR GCA 90 bp AGCCACCAATCTGCTTTTGATGGATTTGCCAATTCTGACATTCCATATCAACGGTGTGAGGCGTGTGCCTaGTCCGTAACTTGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: SHQSAFDGFANSDIPYQRCEACA*SVTWAC
Trigger: GCAAGCCCAAGTTACGGAGCAGGCACACGCCTCACA...CCGTTGATATGGAATGTCAGAATTGGCAAATCCATCAAAAGCAGATTGGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR GCA 90 bp TATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCATTGGTCTTGCAGGAGTaGGACTGGAAGAGGGACGCG +
Preference number: 4 (lower is better)
Translates to: YTYGHIFSPNVIVNMLVALVLQE*DWKRDA
Trigger: CGCGTCCCTCTTCCAGTCGCACTCCTGCAAGACCAA...TGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR GCA 90 bp AGCCACCAATCTGCTTTTGATGGATTTGCCAATTCTGACATTCCATATCAACGGGGGGATCTGGAGCTTTaGCACGGTCTGACAGGACAC +
Preference number: 4 (lower is better)
Translates to: SHQSAFDGFANSDIPYQRGDLEL*HGLTGH
Trigger: GTGTCCTGTCAGACCGTGGCAAAGCTCCAGATCCCC...CCGTTGATATGGAATGTCAGAATTGGCAAATCCATCAAAAGCAGATTGGTGGCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR GCA 90 bp TATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCAGGGGATCTGGAGCTTTaGCACGGTCTGACAGGACAC +
Preference number: 4 (lower is better)
Translates to: YTYGHIFSPNVIVNMLVAGDLEL*HGLTGH
Trigger: GTGTCCTGTCAGACCGTGGCAAAGCTCCAGATCCCC...TGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR GCA 90 bp GGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGAAACAAGAACAAAGTTaGCTGCTTGGGGATCTGGAG +
Preference number: 4 (lower is better)
Translates to: GHIFSPNVIVNMLVAQVGKQEQS*LLGDLE
Trigger: CTCCAGATCCCCAAGCAGGCAACTTTGTTCTTGTTT...CCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp CATAATCGTAGTGTAGCACATTCAATTACTGGTGGGAGGCTGTGTGGTATTTGTCTTCTTCTCCAGTGTTaGTGTTGGGCGGCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: HNRSVAHSITGGRLCGICLLLQC*CWAASP
Trigger: AGGCGAGGCCGCCCAACACCAACACTGGAGAAGAAG...ACAAATACCACACAGCCTCCCACCAGTAATTGAATGTGCTACACTACGATTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR CCA 90 bp TATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCAGCACCACAGCCGGGGTaGTCTCGTCAACGCGAAAAA +
Preference number: 4 (lower is better)
Translates to: YTYGHIFSPNVIVNMLVAAPQPG*SRQREK
Trigger: TTTTTCGCGTTGACGAGACCACCCCGGCTGTGGTGC...TGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp GTGCAAAGTCTGATTTCAAGCCCAGGATTTGTAAACAACAGAGTCATTAGGGCTGTGGTTCCAGGGTGGTaGTTTAGCTGCTGCCACGGT +
Preference number: 4 (lower is better)
Translates to: VQSLISSPGFVNNRVIRAVVPGW*FSCCHG
Trigger: ACCGTGGCAGCAGCTAAACCACCACCCTGGAACCAC...AGCCCTAATGACTCTGTTGTTTACAAATCCTGGGCTTGAAATCAGACTTTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR CCA 90 bp TGTGATGGTAAACAAATGGTGACAAGGCCAAGGGGCCACTATTTAAATACAGCCTTGGTGGTTCCAGGGTaGTGGTTTAGCTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: CDGKQMVTRPRGHYLNTALVVPG*WFSCCH
Trigger: GTGGCAGCAGCTAAACCACCACCCTGGAACCACCAA...GGCTGTATTTAAATAGTGGCCCCTTGGCCTTGTCACCATTTGTTTACCATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR CCA 90 bp GGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGTGGAATTTCCATGTGTaGCATTACTGGCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: GHIFSPNVIVNMLVAQVGWNFHV*HYWLLS
Trigger: GGAGAGAAGCCAGTAATGCCACACATGGAAATTCCA...CCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGCGACAGAGCAAGACTTaGTGGGAGGCTGTGTGGTAT +
Preference number: 4 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQRQSKT*WEAVWY
Trigger: ATACCACACAGCCTCCCACCAAGTCTTGCTCTGTCG...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515138.1
CDS-3UTR CCA 90 bp GTAAAGGCTGGGGTGGTGGTTCTCAAAGATCTTGATGATATTCCTGGGTGTATGATATTCCTGGGTGTATaGGGCCCCATGGCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: VKAGVVVLKDLDDIPGCMIFLGV*GPMARK
Trigger: CTTCCTTGCCATGGGGCCCCATACACCCAGGAATAT...CATACACCCAGGAATATCATCAAGATCTTTGAGAACCACCACCCCAGCCTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512917.1
CDS-3UTR TCA 90 bp TATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACTTCAAGAGGGCCCCTaGAGGTTCATCTTCCGCCAT +
Preference number: 4 (lower is better)
Translates to: YTYGHIFSPNVIVNMLVALQEGP*RFIFRH
Trigger: ATGGCGGAAGATGAACCTTCAGGGGCCCTCTTGAAG...TGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR TCA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGAGCATCTGCCTCTCCTaGAAGTATTCAGCCACGAAC +
Preference number: 4 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQSICLS*KYSATN
Trigger: GTTCGTGGCTGAATACTTTCAGGAGAGGCAGATGCT...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR TCA 90 bp CACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGACTCACCAACACATCTGTTaGACAATCCAAGGTCAAGGC +
Preference number: 4 (lower is better)
Translates to: HIFSPNVIVNMLVAQVGTHQHIC*TIQGQG
Trigger: GCCTTGACCTTGGATTGTTCAACAGATGTGTTGGTG...AGTCCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR GCA 90 bp CACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGACTCAGTCCTCCGCGTTCTaGTCCTGCTTATCAAACTTA +
Preference number: 4 (lower is better)
Translates to: HIFSPNVIVNMLVAQVGTQSSAF*SCLSNL
Trigger: TAAGTTTGATAAGCAGGAGCAGAACGCGGAGGACTG...AGTCCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR GCA 90 bp GGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGACCTCTGTCACTTTTTaGAGCGTCGATGTTGGAATT +
Preference number: 4 (lower is better)
Translates to: GHIFSPNVIVNMLVAQVGTSVTF*SVDVGI
Trigger: AATTCCAACATCGACGCTGCAAAAAGTGACAGAGGT...CCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR GCA 90 bp TATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCAGGGAGGTCTTGGTCTTaGAGGAGTGCGACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: YTYGHIFSPNVIVNMLVAGRSWS*RSATGR
Trigger: TCTTCCAGTCGCACTCCTGCAAGACCAAGACCTCCC...TGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR GCA 90 bp GGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGGGAAGCTCCGAGAGTTaGTTCATTGAAAGGAAAAAC +
Preference number: 4 (lower is better)
Translates to: GHIFSPNVIVNMLVAQVGGSSES*FIERKN
Trigger: GTTTTTCCTTTCAATGAAGCAACTCTCGGAGCTTCC...CCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp CAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTTTGGGCGGCCTCGCCTaGGAGGGATGGAAACACCTG +
Preference number: 4 (lower is better)
Translates to: QSCYIYTYGHIFSPNVIVLGGLA*EGWKHL
Trigger: CAGGTGTTTCCATCCCTCCCAGGCGAGGCCGCCCAA...AACTATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239587.10
ENST00000515138.1
CDS-3UTR CCA 90 bp TATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCATTGGTGGTTCCAGGGTaGTGGTTTAGCTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: YTYGHIFSPNVIVNMLVALVVPG*WFSCCH
Trigger: GTGGCAGCAGCTAAACCACCACCCTGGAACCACCAA...TGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGTCCAATAGCTATGCTTaGTGCCCAGCATCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQSNSYA*CPASAS
Trigger: AGAGGCAGATGCTGGGCACCAAGCATAGCTATTGGA...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp CACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGACTGGTCAAACTTTTCCGTaGCAAACCGAACCAACCCTT +
Preference number: 4 (lower is better)
Translates to: HIFSPNVIVNMLVAQVGTGQTFP*QTEPTL
Trigger: AAGGGTTGGTTCGGTTTGCCACGGAAAAGTTTGACC...AGTCCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGAGCAAAGGGGACAGATaGTGCAATGGCGAGAATGGT +
Preference number: 4 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQSKGDR*CNGENG
Trigger: ACCATTCTCGCCATTGCACCATCTGTCCCCTTTGCT...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp GCAGGAATGACAGCATACTTTGATCTGGGAGGCCATGACCTCACATGCTGTGATTTGCAGCGTCGATGTTaGAATTTCCATGTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: AGMTAYFDLGGHDLTCCDLQRRC*NFHVWH
Trigger: ATGCCACACATGGAAATTCCAACATCGACGCTGCAA...ATCACAGCATGTGAGGTCATGGCCTCCCAGATCAAAGTATGCTGTCATTCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR TCA 90 bp CTGATTTCAAGCCCAGGATTTGTAAACAACAGAGTCATTAGGGCTTTCAGTGATCTTCAAGAGGGCCCCTaGAGGTTCATCTTCCGCCAT +
Preference number: 4 (lower is better)
Translates to: LISSPGFVNNRVIRAFSDLQEGP*RFIFRH
Trigger: ATGGCGGAAGATGAACCTTCAGGGGCCCTCTTGAAG...ATCACTGAAAGCCCTAATGACTCTGTTGTTTACAAATCCTGGGCTTGAAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR TCA 90 bp GGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGTGTTTTGCAAATTACTaGGGTCAAACTTTTCCGTGG +
Preference number: 4 (lower is better)
Translates to: GHIFSPNVIVNMLVAQVGCFANY*GQTFPW
Trigger: CCACGGAAAAGTTTGACCTCAGTAATTTGCAAAACA...CCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR TCA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGAGGCCCCGGATTTATTaGTGCTGCTGTTGGTCAAAT +
Preference number: 4 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQRPRIY*CCCWSN
Trigger: ATTTGACCAACAGCAGCATCAATAAATCCGGGGCCT...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR TCA 90 bp CACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGACTGACCAATCACTTCTTTaGTCTTCTCATAAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: HIFSPNVIVNMLVAQVGTDQSLL*SSHKRP
Trigger: GGGCCTCTTATGAGAAGATCAAAGAAGTGATTGGTC...AGTCCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR TCA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGCACCAACACATCTGTTaGACAATCCAAGGTCAAGGC +
Preference number: 4 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQHQHIC*TIQGQG
Trigger: GCCTTGACCTTGGATTGTTCAACAGATGTGTTGGTG...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR TCA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGTCCCTTGTTGACAGATaGAAATCCTGCCCACTCATC +
Preference number: 4 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQSLVDR*KSCPLI
Trigger: GATGAGTGGGCAGGATTTTCATCTGTCAACAAGGGA...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR TCA 90 bp CAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTGGCATGAGTGTCTTGTaGGGCGTGTGCCTGCTCCGT +
Preference number: 4 (lower is better)
Translates to: QSCYIYTYGHIFSPNVIVGMSVL*GVCLLR
Trigger: ACGGAGCAGGCACACGCCTCACAAGACACTCATGCC...AACTATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR TCA 90 bp CAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAGCTTTGCCACGGTCTaGCAGGACACACGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: QSCYIYTYGHIFSPNVIVSFATV*QDTRGG
Trigger: ACCTCCCCGTGTGTCCTGTCAGACCGTGGCAAAGCT...AACTATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR TCA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGCACAGGTAGGGACTTaGACTATTGCTTTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQAQVGT*TIAFSR
Trigger: CCTAGAGAAAGCAATAGTTCAAGTCCCTACCTGTGC...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR TCA 90 bp GCAGGAATGACAGCATACTTTGATCTGGGAGGCCATGACCTCACATGCTGTGATTTTATGTGGCAGGAATaGCAGCATACTTTGATCTGG +
Preference number: 4 (lower is better)
Translates to: AGMTAYFDLGGHDLTCCDFMWQE*QHTLIW
Trigger: CCAGATCAAAGTATGCTGTCATTCCTGCCACATAAA...ATCACAGCATGTGAGGTCATGGCCTCCCAGATCAAAGTATGCTGTCATTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR TCA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGAATGACTTGAACCTATaGGGCGGAAGTTGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQNDLNL*GGSCSE
Trigger: CTCACTGCAACTTCCGCCTCATAGGTTCAAGTCATT...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515138.1
CDS-3UTR GCA 90 bp CACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGACTTCCGCGTTCTGCTCCTaGTTATCAAACTTATTCCAC +
Preference number: 4 (lower is better)
Translates to: HIFSPNVIVNMLVAQVGTSAFCS*LSNLFH
Trigger: GTGGAATAAGTTTGATAAGCAGGAGCAGAACGCGGA...AGTCCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR GCA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGCAGTCCTCCGCGTTCTaGTCCTGCTTATCAAACTTA +
Preference number: 4 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQQSSAF*SCLSNL
Trigger: TAAGTTTGATAAGCAGGAGCAGAACGCGGAGGACTG...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR GCA 90 bp GCAGGAATGACAGCATACTTTGATCTGGGAGGCCATGACCTCACATGCTGTGATACCTCTGTCACTTTTTaGAGCGTCGATGTTGGAATT +
Preference number: 4 (lower is better)
Translates to: AGMTAYFDLGGHDLTCCDTSVTF*SVDVGI
Trigger: AATTCCAACATCGACGCTGCAAAAAGTGACAGAGGT...ATCACAGCATGTGAGGTCATGGCCTCCCAGATCAAAGTATGCTGTCATTCCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR GCA 90 bp CACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGACTAAGAACAAAGTTGCCTaGTTGGGGATCTGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: HIFSPNVIVNMLVAQVGTKNKVA*LGIWSF
Trigger: AAAGCTCCAGATCCCCAAGCAGGCAACTTTGTTCTT...AGTCCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR GCA 90 bp TGTGATGGTAAACAAATGGTGACAAGGCCAAGGGGCCACTATTTAAATACAGCCAATACAGCCCAAAGATaGCCCCACAGGGAGCTCTTT +
Preference number: 4 (lower is better)
Translates to: CDGKQMVTRPRGHYLNTANTAQR*PHRELF
Trigger: AAAGAGCTCCCTGTGGGGGCATCTTTGGGCTGTATT...GGCTGTATTTAAATAGTGGCCCCTTGGCCTTGTCACCATTTGTTTACCATCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR GCA 90 bp CACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGACTGGCCATGACCTCACATaGTGTGATGGTAAACAAATG +
Preference number: 4 (lower is better)
Translates to: HIFSPNVIVNMLVAQVGTGHDLT*CDGKQM
Trigger: CATTTGTTTACCATCACAGCATGTGAGGTCATGGCC...AGTCCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR GCA 90 bp GTAAAGGCTGGGGTGGTGGTTCTCAAAGATCTTGATGATATTCCTGGGTGTATGTTTTGGCACATTCACTaGTTACAGGACAGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: VKAGVVVLKDLDDIPGCMFWHIH*LQDRAP
Trigger: TGGGGCTCTGTCCTGTAAGCAGTGAATGTGCCAAAA...CATACACCCAGGAATATCATCAAGATCTTTGAGAACCACCACCCCAGCCTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512917.1
CDS-3UTR CCA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGTGTGCTTCAGGTGTTTaGCCAAACAGTCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQCASGV*PNSLSW
Trigger: CCAGGAAAGACTGTTTGGCCAAACACCTGAAGCACA...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp CACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGACTTTGCAGCGTCGATGTTaGAATTTCCATGTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: HIFSPNVIVNMLVAQVGTLQRRC*NFHVWH
Trigger: ATGCCACACATGGAAATTCCAACATCGACGCTGCAA...AGTCCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR TCA 90 bp TATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCAAGCATCTGCCTCTCCTaGAAGTATTCAGCCACGAAC +
Preference number: 4 (lower is better)
Translates to: YTYGHIFSPNVIVNMLVASICLS*KYSATN
Trigger: GTTCGTGGCTGAATACTTTCAGGAGAGGCAGATGCT...TGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR TCA 90 bp GATGCCCCCACAGGGAGCTCTTTGGTGCAAAGTCTGATTTCAAGCCCAGGATTTTGTACATTCTGCTTGTaGACGAAAGAGAATCATAAG +
Preference number: 4 (lower is better)
Translates to: DAPTGSSLVQSLISSPGFCTFCL*TKENHK
Trigger: CTTATGATTCTCTTTCGTTCACAAGCAGAATGTACA...AAATCCTGGGCTTGAAATCAGACTTTGCACCAAAGAGCTCCCTGTGGGGGCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR TCA 90 bp TTGTGCAACCATCACCTCTATATAGTTCCAGAACATTTCTGTCACCCCAAAGGGTCCCTTGTTGACAGATaGAAATCCTGCCCACTCATC +
Preference number: 4 (lower is better)
Translates to: LCNHHLYIVPEHFCHPKGSLVDR*KSCPLI
Trigger: GATGAGTGGGCAGGATTTTCATCTGTCAACAAGGGA...CCCTTTGGGGTGACAGAAATGTTCTGGAACTATATAGAGGTGATGGTTGCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR GCA 90 bp CTCTTTGGTGCAAAGTCTGATTTCAAGCCCAGGATTTGTAAACAACAGAGTCATGGGTGGTGGTTTAGCTaGTGCCACGGTTTAACACTG +
Preference number: 4 (lower is better)
Translates to: LFGAKSDFKPRICKQQSHGWWFS*CHGLTL
Trigger: CAGTGTTAAACCGTGGCAGCAGCTAAACCACCACCC...ATGACTCTGTTGTTTACAAATCCTGGGCTTGAAATCAGACTTTGCACCAAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR GCA 90 bp CACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGACTACCTCTGTCACTTTTTaGAGCGTCGATGTTGGAATT +
Preference number: 4 (lower is better)
Translates to: HIFSPNVIVNMLVAQVGTTSVTF*SVDVGI
Trigger: AATTCCAACATCGACGCTGCAAAAAGTGACAGAGGT...AGTCCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR GCA 90 bp GCCACCAATCTGCTTTTGATGGATTTGCCAATTCTGACATTCCATATCAACGGATCCGTAACTTGGGCTTaGTTTGTGGCATCTCCCTTG +
Preference number: 4 (lower is better)
Translates to: ATNLLLMDLPILTFHINGSVTWA*FVASPL
Trigger: CAAGGGAGATGCCACAAAGCAAGCCCAAGTTACGGA...TCCGTTGATATGGAATGTCAGAATTGGCAAATCCATCAAAAGCAGATTGGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR GCA 90 bp CAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTTTGGTCTTGCAGGAGTaGGACTGGAAGAGGGACGCG +
Preference number: 4 (lower is better)
Translates to: QSCYIYTYGHIFSPNVIVLVLQE*DWKRDA
Trigger: CGCGTCCCTCTTCCAGTCGCACTCCTGCAAGACCAA...AACTATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR GCA 90 bp ACCTACTGGAATTTTTATGTCTTAGGACTGCAGATGCTTTTTATGTGGCAGGAAGGGAGGTCTTGGTCTTaGAGGAGTGCGACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: TYWNFYVLGLQMLFMWQEGRSWS*RSATGR
Trigger: TCTTCCAGTCGCACTCCTGCAAGACCAAGACCTCCC...TTCCTGCCACATAAAAAGCATCTGCAGTCCTAAGACATAAAAATTCCAGTAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR GCA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGAAACAAGAACAAAGTTaGCTGCTTGGGGATCTGGAG +
Preference number: 4 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQKQEQS*LLGDLE
Trigger: CTCCAGATCCCCAAGCAGGCAACTTTGTTCTTGTTT...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp CAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTCTTCTTCTCCAGTGTTaGTGTTGGGCGGCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: QSCYIYTYGHIFSPNVIVLLLQC*CWAASP
Trigger: AGGCGAGGCCGCCCAACACCAACACTGGAGAAGAAG...AACTATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239587.10
ENST00000515138.1
CDS-3UTR CCA 90 bp TATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCATCCAATAGCTATGCTTaGTGCCCAGCATCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: YTYGHIFSPNVIVNMLVASNSYA*CPASAS
Trigger: AGAGGCAGATGCTGGGCACCAAGCATAGCTATTGGA...TGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp TGTGATGGTAAACAAATGGTGACAAGGCCAAGGGGCCACTATTTAAATACAGCCGGTCAAACTTTTCCGTaGCAAACCGAACCAACCCTT +
Preference number: 4 (lower is better)
Translates to: CDGKQMVTRPRGHYLNTAGQTFP*QTEPTL
Trigger: AAGGGTTGGTTCGGTTTGCCACGGAAAAGTTTGACC...GGCTGTATTTAAATAGTGGCCCCTTGGCCTTGTCACCATTTGTTTACCATCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR CCA 90 bp GTGCAAAGTCTGATTTCAAGCCCAGGATTTGTAAACAACAGAGTCATTAGGGCTAGCAAAGGGGACAGATaGTGCAATGGCGAGAATGGT +
Preference number: 4 (lower is better)
Translates to: VQSLISSPGFVNNRVIRASKGDR*CNGENG
Trigger: ACCATTCTCGCCATTGCACCATCTGTCCCCTTTGCT...AGCCCTAATGACTCTGTTGTTTACAAATCCTGGGCTTGAAATCAGACTTTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR CCA 90 bp TGTCAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATACACACGGGGAGGTCTTaGTCTTGCAGGAGTGCGACT +
Preference number: 4 (lower is better)
Translates to: CQSCYIYTYGHIFSPNVIHTGRS*SCRSAT
Trigger: AGTCGCACTCCTGCAAGACCAAGACCTCCCCGTGTG...TATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp CATAATCGTAGTGTAGCACATTCAATTACTGGTGGGAGGCTGTGTGGTATTTGTACAAAGTTGCCTGCTTaGGGATCTGGAGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: HNRSVAHSITGGRLCGICTKLPA*GSGALP
Trigger: TGGCAAAGCTCCAGATCCCCAAGCAGGCAACTTTGT...ACAAATACCACACAGCCTCCCACCAGTAATTGAATGTGCTACACTACGATTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR CCA 90 bp TATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGAGCAAGACTTGGTaGGAGGCTGTGTGGTATTTG +
Preference number: 4 (lower is better)
Translates to: YTYGHIFSPNVIVNMLVAQSKTW*EAVWYL
Trigger: CAAATACCACACAGCCTCCCACCAAGTCTTGCTCTG...TGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515138.1
CDS-3UTR TCA 90 bp CTGATTTCAAGCCCAGGATTTGTAAACAACAGAGTCATTAGGGCTTTCAGTGATAGCATCTGCCTCTCCTaGAAGTATTCAGCCACGAAC +
Preference number: 4 (lower is better)
Translates to: LISSPGFVNNRVIRAFSDSICLS*KYSATN
Trigger: GTTCGTGGCTGAATACTTTCAGGAGAGGCAGATGCT...ATCACTGAAAGCCCTAATGACTCTGTTGTTTACAAATCCTGGGCTTGAAATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR TCA 90 bp CACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGACTTGTTTTGCAAATTACTaGGGTCAAACTTTTCCGTGG +
Preference number: 4 (lower is better)
Translates to: HIFSPNVIVNMLVAQVGTCFANY*GQTFPW
Trigger: CCACGGAAAAGTTTGACCTCAGTAATTTGCAAAACA...AGTCCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR TCA 90 bp TATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCAAGGCCCCGGATTTATTaGTGCTGCTGTTGGTCAAAT +
Preference number: 4 (lower is better)
Translates to: YTYGHIFSPNVIVNMLVARPRIY*CCCWSN
Trigger: ATTTGACCAACAGCAGCATCAATAAATCCGGGGCCT...TGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR TCA 90 bp GGTAAACAAATGGTGACAAGGCCAAGGGGCCACTATTTAAATACAGCCCAAAGAGACCAATCACTTCTTTaGTCTTCTCATAAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: GKQMVTRPRGHYLNTAQRDQSLL*SSHKRP
Trigger: GGGCCTCTTATGAGAAGATCAAAGAAGTGATTGGTC...TCTTTGGGCTGTATTTAAATAGTGGCCCCTTGGCCTTGTCACCATTTGTTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR TCA 90 bp GCCACCAATCTGCTTTTGATGGATTTGCCAATTCTGACATTCCATATCAACGGACACCAACACATCTGTTaGACAATCCAAGGTCAAGGC +
Preference number: 4 (lower is better)
Translates to: ATNLLLMDLPILTFHINGHQHIC*TIQGQG
Trigger: GCCTTGACCTTGGATTGTTCAACAGATGTGTTGGTG...TCCGTTGATATGGAATGTCAGAATTGGCAAATCCATCAAAAGCAGATTGGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR TCA 90 bp CTCTTTGGTGCAAAGTCTGATTTCAAGCCCAGGATTTGTAAACAACAGAGTCATTGGCATCTCCCTTGTTaGCAGATGAAAATCCTGCCC +
Preference number: 4 (lower is better)
Translates to: LFGAKSDFKPRICKQQSHWHLPC*QMKILP
Trigger: GGGCAGGATTTTCATCTGTCAACAAGGGAGATGCCA...ATGACTCTGTTGTTTACAAATCCTGGGCTTGAAATCAGACTTTGCACCAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR GCA 90 bp AGCCACCAATCTGCTTTTGATGGATTTGCCAATTCTGACATTCCATATCAACGGCTGCTCAGTGTGGTTTaGCTCGGATGGAATGTTAAG +
Preference number: 4 (lower is better)
Translates to: SHQSAFDGFANSDIPYQRLLSVV*LGWNVK
Trigger: CTTAACATTCCATCCGAGGCAAACCACACTGAGCAG...CCGTTGATATGGAATGTCAGAATTGGCAAATCCATCAAAAGCAGATTGGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR GCA 90 bp CACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGACTATAACTCAGCAGGCTTaGAAATCCAATAGCTATGCT +
Preference number: 4 (lower is better)
Translates to: HIFSPNVIVNMLVAQVGTITQQA*KSNSYA
Trigger: AGCATAGCTATTGGATTTGCAAGCCTGCTGAGTTAT...AGTCCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp TATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCAGTGGTTTGCCTCGGATaGAATGTTAAGGGTAAAGGC +
Preference number: 4 (lower is better)
Translates to: YTYGHIFSPNVIVNMLVAVVCLG*NVKGKG
Trigger: GCCTTTACCCTTAACATTCCATCCGAGGCAAACCAC...TGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239587.10
ENST00000515138.1
CDS-3UTR CCA 90 bp TGTCAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATATTGGTGGTTCCAGGGTaGTGGTTTAGCTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: CQSCYIYTYGHIFSPNVILVVPG*WFSCCH
Trigger: GTGGCAGCAGCTAAACCACCACCCTGGAACCACCAA...TATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGCATTTAATCCATTCCTaGAAGCTCCGAGAGTTGCTT +
Preference number: 4 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQHLIHS*KLRELL
Trigger: AAGCAACTCTCGGAGCTTCCAGGAATGGATTAAATG...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp CATAATCGTAGTGTAGCACATTCAATTACTGGTGGGAGGCTGTGTGGTATTTGTCAGCATACTTTGATCTaGGAGGCCATGACCTCACAT +
Preference number: 4 (lower is better)
Translates to: HNRSVAHSITGGRLCGICQHTLI*EAMTSH
Trigger: ATGTGAGGTCATGGCCTCCCAGATCAAAGTATGCTG...ACAAATACCACACAGCCTCCCACCAGTAATTGAATGTGCTACACTACGATTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR TCA 90 bp GTGCAAAGTCTGATTTCAAGCCCAGGATTTGTAAACAACAGAGTCATTAGGGCTCTTTGGTGCAAAGTCTaGTTTCAAGCCCAGGATTTG +
Preference number: 4 (lower is better)
Translates to: VQSLISSPGFVNNRVIRALWCKV*FQAQDL
Trigger: CAAATCCTGGGCTTGAAATCAGACTTTGCACCAAAG...AGCCCTAATGACTCTGTTGTTTACAAATCCTGGGCTTGAAATCAGACTTTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR GCA 90 bp TATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCATCCGCGTTCTGCTCCTaGTTATCAAACTTATTCCAC +
Preference number: 4 (lower is better)
Translates to: YTYGHIFSPNVIVNMLVASAFCS*LSNLFH
Trigger: GTGGAATAAGTTTGATAAGCAGGAGCAGAACGCGGA...TGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR GCA 90 bp CTCTTTGGTGCAAAGTCTGATTTCAAGCCCAGGATTTGTAAACAACAGAGTCATTGGTGGTTTAGCTGCTaGCACGGTTTAACACTGTTG +
Preference number: 4 (lower is better)
Translates to: LFGAKSDFKPRICKQQSHWWFSC*HGLTLL
Trigger: CAACAGTGTTAAACCGTGGCAGCAGCTAAACCACCA...ATGACTCTGTTGTTTACAAATCCTGGGCTTGAAATCAGACTTTGCACCAAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR GCA 90 bp TATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCATACATCCTCCTCATGTaGTTCAGGTGTTTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: YTYGHIFSPNVIVNMLVAYILLM*FRCLAK
Trigger: TTTGGCCAAACACCTGAAGCACATGAGGAGGATGTA...TGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR GCA 90 bp TATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCAAAGAACAAAGTTGCCTaGTTGGGGATCTGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: YTYGHIFSPNVIVNMLVAKNKVA*LGIWSF
Trigger: AAAGCTCCAGATCCCCAAGCAGGCAACTTTGTTCTT...TGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp CAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAAAGATCCCAGCGCCTaGCTTTGTGTGGAGGAACAC +
Preference number: 4 (lower is better)
Translates to: QSCYIYTYGHIFSPNVIVKDPSA*LCVEEH
Trigger: GTGTTCCTCCACACAAAGCCAGGCGCTGGGATCTTT...AACTATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239587.10
ENST00000515138.1
CDS-3UTR CCA 90 bp AGCCCAGGATTTGTAAACAACAGAGTCATTAGGGCTTTCAGTGATTTATCTCACGTGGTTTGCCTCGGATaGAATGTTAAGGGTAAAGGC +
Preference number: 4 (lower is better)
Translates to: SPGFVNNRVIRAFSDLSHVVCLG*NVKGKG
Trigger: GCCTTTACCCTTAACATTCCATCCGAGGCAAACCAC...GTGAGATAAATCACTGAAAGCCCTAATGACTCTGTTGTTTACAAATCCTGGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR CCA 90 bp AGCCACCAATCTGCTTTTGATGGATTTGCCAATTCTGACATTCCATATCAACGGAGCACATTCAATTACTaGTGGGAGGCTGTGTGGTAT +
Preference number: 4 (lower is better)
Translates to: SHQSAFDGFANSDIPYQRSTFNY*WEAVWY
Trigger: ATACCACACAGCCTCCCACCAGTAATTGAATGTGCT...CCGTTGATATGGAATGTCAGAATTGGCAAATCCATCAAAAGCAGATTGGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR TCA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGTGTACATTCTGCTTGTaGACGAAAGAGAATCATAAG +
Preference number: 4 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQCTFCL*TKENHK
Trigger: CTTATGATTCTCTTTCGTTCACAAGCAGAATGTACA...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR TCA 90 bp TGTCAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATATGGCATCTCCCTTGTTaGCAGATGAAAATCCTGCCC +
Preference number: 4 (lower is better)
Translates to: CQSCYIYTYGHIFSPNVIWHLPC*QMKILP
Trigger: GGGCAGGATTTTCATCTGTCAACAAGGGAGATGCCA...TATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR TCA 90 bp CCCCTAAGCCACCAATCTGCTTTTGATGGATTTGCCAATTCTGACATTCCATATTGGATTTGCCAATTCTaGCATTCCATATCAACGGAG +
Preference number: 4 (lower is better)
Translates to: PLSHQSAFDGFANSDIPYWICQF*HSISTE
Trigger: CTCCGTTGATATGGAATGTCAGAATTGGCAAATCCA...ATATGGAATGTCAGAATTGGCAAATCCATCAAAAGCAGATTGGTGGCTTAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR GCA 90 bp AGCCCAGGATTTGTAAACAACAGAGTCATTAGGGCTTTCAGTGATTTATCTCACTCCGCGTTCTGCTCCTaGTTATCAAACTTATTCCAC +
Preference number: 4 (lower is better)
Translates to: SPGFVNNRVIRAFSDLSHSAFCS*LSNLFH
Trigger: GTGGAATAAGTTTGATAAGCAGGAGCAGAACGCGGA...GTGAGATAAATCACTGAAAGCCCTAATGACTCTGTTGTTTACAAATCCTGGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR GCA 90 bp CTGATTTCAAGCCCAGGATTTGTAAACAACAGAGTCATTAGGGCTTTCAGTGATTACATCCTCCTCATGTaGTTCAGGTGTTTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: LISSPGFVNNRVIRAFSDYILLM*FRCLAK
Trigger: TTTGGCCAAACACCTGAAGCACATGAGGAGGATGTA...ATCACTGAAAGCCCTAATGACTCTGTTGTTTACAAATCCTGGGCTTGAAATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR GCA 90 bp TATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCAGGAAGCTCCGAGAGTTaGTTCATTGAAAGGAAAAAC +
Preference number: 4 (lower is better)
Translates to: YTYGHIFSPNVIVNMLVAGSSES*FIERKN
Trigger: GTTTTTCCTTTCAATGAAGCAACTCTCGGAGCTTCC...TGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR GCA 90 bp CACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGACTCACTTGAACATATTGTaGTTTGTCAGAGCTGTTATA +
Preference number: 4 (lower is better)
Translates to: HIFSPNVIVNMLVAQVGTHLNIL*FVRAVI
Trigger: TATAACAGCTCTGACAAAGCACAATATGTTCAAGTG...AGTCCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR GCA 90 bp TATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACCAATTGCAGATTTTTaGTGTAGTCCCAGCTACTCA +
Preference number: 4 (lower is better)
Translates to: YTYGHIFSPNVIVNMLVAPIADF*CSPSYS
Trigger: TGAGTAGCTGGGACTACAGCAAAAATCTGCAATTGG...TGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515138.1
CDS-3UTR CCA 90 bp AATCTGCTTTTGATGGATTTGCCAATTCTGACATTCCATATCAACGGAGTCATATCCAATAGCTATGCTTaGTGCCCAGCATCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: NLLLMDLPILTFHINGVISNSYA*CPASAS
Trigger: AGAGGCAGATGCTGGGCACCAAGCATAGCTATTGGA...TATGACTCCGTTGATATGGAATGTCAGAATTGGCAAATCCATCAAAAGCAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR CCA 90 bp CAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTACAAAGTTGCCTGCTTaGGGATCTGGAGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: QSCYIYTYGHIFSPNVIVTKLPA*GSGALP
Trigger: TGGCAAAGCTCCAGATCCCCAAGCAGGCAACTTTGT...AACTATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp TGTCAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATAACAAAGTTGCCTGCTTaGGGATCTGGAGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: CQSCYIYTYGHIFSPNVITKLPA*GSGALP
Trigger: TGGCAAAGCTCCAGATCCCCAAGCAGGCAACTTTGT...TATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp CATAATCGTAGTGTAGCACATTCAATTACTGGTGGGAGGCTGTGTGGTATTTGTCATTTAATCCATTCCTaGAAGCTCCGAGAGTTGCTT +
Preference number: 4 (lower is better)
Translates to: HNRSVAHSITGGRLCGICHLIHS*KLRELL
Trigger: AAGCAACTCTCGGAGCTTCCAGGAATGGATTAAATG...ACAAATACCACACAGCCTCCCACCAGTAATTGAATGTGCTACACTACGATTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR CCA 90 bp TATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCAACATTCAATTACTGGTaGGAGGCTGTGTGGTATTTG +
Preference number: 4 (lower is better)
Translates to: YTYGHIFSPNVIVNMLVATFNYW*EAVWYL
Trigger: CAAATACCACACAGCCTCCCACCAGTAATTGAATGT...TGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR TCA 90 bp AGCCACCAATCTGCTTTTGATGGATTTGCCAATTCTGACATTCCATATCAACGGTGTTTTGCAAATTACTaGGGTCAAACTTTTCCGTGG +
Preference number: 4 (lower is better)
Translates to: SHQSAFDGFANSDIPYQRCFANY*GQTFPW
Trigger: CCACGGAAAAGTTTGACCTCAGTAATTTGCAAAACA...CCGTTGATATGGAATGTCAGAATTGGCAAATCCATCAAAAGCAGATTGGTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR TCA 90 bp GTGCAAAGTCTGATTTCAAGCCCAGGATTTGTAAACAACAGAGTCATTAGGGCTGTCCATTTACAACCATaGCCAATCACTTCTTTGATC +
Preference number: 4 (lower is better)
Translates to: VQSLISSPGFVNNRVIRAVHLQP*PITSLI
Trigger: GATCAAAGAAGTGATTGGTCATGGTTGTAAATGGAC...AGCCCTAATGACTCTGTTGTTTACAAATCCTGGGCTTGAAATCAGACTTTGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR TCA 90 bp TATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCAGTCCATTTACAACCATaGCCAATCACTTCTTTGATC +
Preference number: 4 (lower is better)
Translates to: YTYGHIFSPNVIVNMLVAVHLQP*PITSLI
Trigger: GATCAAAGAAGTGATTGGTCATGGTTGTAAATGGAC...TGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR GCA 90 bp TGTCAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATACTGCTCAGTGTGGTTTaGCTCGGATGGAATGTTAAG +
Preference number: 4 (lower is better)
Translates to: CQSCYIYTYGHIFSPNVILLSVV*LGWNVK
Trigger: CTTAACATTCCATCCGAGGCAAACCACACTGAGCAG...TATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239587.10
ENST00000515138.1
CDS-3UTR GCA 90 bp CAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTCAGTCCTCCGCGTTCTaGTCCTGCTTATCAAACTTA +
Preference number: 4 (lower is better)
Translates to: QSCYIYTYGHIFSPNVIVQSSAF*SCLSNL
Trigger: TAAGTTTGATAAGCAGGAGCAGAACGCGGAGGACTG...AACTATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR GCA 90 bp TGTCAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATATGGTGGTTTAGCTGCTaGCACGGTTTAACACTGTTG +
Preference number: 4 (lower is better)
Translates to: CQSCYIYTYGHIFSPNVIWWFSC*HGLTLL
Trigger: CAACAGTGTTAAACCGTGGCAGCAGCTAAACCACCA...TATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR GCA 90 bp TATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCAATAACTCAGCAGGCTTaGAAATCCAATAGCTATGCT +
Preference number: 4 (lower is better)
Translates to: YTYGHIFSPNVIVNMLVAITQQA*KSNSYA
Trigger: AGCATAGCTATTGGATTTGCAAGCCTGCTGAGTTAT...TGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp TGTCAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATAGGTCAAACTTTTCCGTaGCAAACCGAACCAACCCTT +
Preference number: 4 (lower is better)
Translates to: CQSCYIYTYGHIFSPNVIGQTFP*QTEPTL
Trigger: AAGGGTTGGTTCGGTTTGCCACGGAAAAGTTTGACC...TATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp TATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCAAGAATAACCATGCGGTaGATTTTCTTCCACAAAAGC +
Preference number: 4 (lower is better)
Translates to: YTYGHIFSPNVIVNMLVARITMR*IFFHKS
Trigger: GCTTTTGTGGAAGAAAATCCACCGCATGGTTATTCT...TGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp CATAATCGTAGTGTAGCACATTCAATTACTGGTGGGAGGCTGTGTGGTATTTGTGAGTCATACAACATGTaGCCTTTTGTATCTGACTAC +
Preference number: 4 (lower is better)
Translates to: HNRSVAHSITGGRLCGICESYNM*PFVSDY
Trigger: GTAGTCAGATACAAAAGGCCACATGTTGTATGACTC...ACAAATACCACACAGCCTCCCACCAGTAATTGAATGTGCTACACTACGATTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR TCA 90 bp TGTCAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATAGACCAATCACTTCTTTaGTCTTCTCATAAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: CQSCYIYTYGHIFSPNVIDQSLL*SSHKRP
Trigger: GGGCCTCTTATGAGAAGATCAAAGAAGTGATTGGTC...TATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR GCA 90 bp CAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTTACATCCTCCTCATGTaGTTCAGGTGTTTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: QSCYIYTYGHIFSPNVIVYILLM*FRCLAK
Trigger: TTTGGCCAAACACCTGAAGCACATGAGGAGGATGTA...AACTATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp CAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTTGGAATTTCCATGTGTaGCATTACTGGCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: QSCYIYTYGHIFSPNVIVWNFHV*HYWLLS
Trigger: GGAGAGAAGCCAGTAATGCCACACATGGAAATTCCA...AACTATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp TGTCAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATATTGCAGCGTCGATGTTaGAATTTCCATGTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: CQSCYIYTYGHIFSPNVILQRRC*NFHVWH
Trigger: ATGCCACACATGGAAATTCCAACATCGACGCTGCAA...TATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR GCA 90 bp TATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACACTTGAACATATTGTaGTTTGTCAGAGCTGTTATA +
Preference number: 4 (lower is better)
Translates to: YTYGHIFSPNVIVNMLVAHLNIL*FVRAVI
Trigger: TATAACAGCTCTGACAAAGCACAATATGTTCAAGTG...TGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CCA 90 bp CAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTCATTTAATCCATTCCTaGAAGCTCCGAGAGTTGCTT +
Preference number: 4 (lower is better)
Translates to: QSCYIYTYGHIFSPNVIVHLIHS*KLRELL
Trigger: AAGCAACTCTCGGAGCTTCCAGGAATGGATTAAATG...AACTATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR TCA 90 bp TGTCAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATAGTCCATTTACAACCATaGCCAATCACTTCTTTGATC +
Preference number: 4 (lower is better)
Translates to: CQSCYIYTYGHIFSPNVIVHLQP*PITSLI
Trigger: GATCAAAGAAGTGATTGGTCATGGTTGTAAATGGAC...TATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR TCA 90 bp CAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTTTCTTTCAAGACACCTaGGCAAATAAACATGGGATG +
Preference number: 4 (lower is better)
Translates to: QSCYIYTYGHIFSPNVIVFFQDT*ANKHGM
Trigger: CATCCCATGTTTATTTGCTCAGGTGTCTTGAAAGAA...AACTATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239587.10
ENST00000515138.1
CDS-3UTR CCA 90 bp TGTCAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATAAGAATAACCATGCGGTaGATTTTCTTCCACAAAAGC +
Preference number: 4 (lower is better)
Translates to: CQSCYIYTYGHIFSPNVIRITMR*IFFHKS
Trigger: GCTTTTGTGGAAGAAAATCCACCGCATGGTTATTCT...TATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR GCA 90 bp AATCTGCTTTTGATGGATTTGCCAATTCTGACATTCCATATCAACGGAGTCATACACTTGAACATATTGTaGTTTGTCAGAGCTGTTATA +
Preference number: 4 (lower is better)
Translates to: NLLLMDLPILTFHINGVIHLNIL*FVRAVI
Trigger: TATAACAGCTCTGACAAAGCACAATATGTTCAAGTG...TATGACTCCGTTGATATGGAATGTCAGAATTGGCAAATCCATCAAAAGCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS CCA 90 bp TCTTCTTCTCCAGTGTTGGTGTTGGGCGGCCTCGCCTGGGAGGGATaGAAACACCTGCTTCCTGTAGCCTTGCTCCCAGGCCTGCAGGCG +
Preference number: 5 (lower is better)
Translates to: SSSPVLVLGGLAWEG*KHLLPVALLPGLQA
Trigger: CGCCTGCAGGCCTGGGAGCAAGGCTACAGGAAGCAGGTGTTTCCATCCCTCCCAGGCGAGGCCGCCCAACACCAACACTGGAGAAGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239587.10
ENST00000515138.1
CDS TCA 90 bp TCTTGGTCTTGCAGGAGTGCGACTGGAAGAGGGACGCGTAGGGCATaGGTGTCTTGTGAGGCGTGTGCCTGCTCCGTAACTTGGGCTTGC +
Preference number: 5 (lower is better)
Translates to: SWSCRSATGRGTRRA*VSCEACACSVTWAC
Trigger: GCAAGCCCAAGTTACGGAGCAGGCACACGCCTCACAAGACACTCATGCCCTACGCGTCCCTCTTCCAGTCGCACTCCTGCAAGACCAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp GGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGTCTCCAGTGTTGGTGTaGGGCGGCCTCGCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: GHIFSPNVIVNMLVAQVGSPVLV*GGLAWE
Trigger: CTCCCAGGCGAGGCCGCCCAACACCAACACTGGAGA...CCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239587.10
ENST00000515138.1
CDS-3UTR CAA 90 bp GGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGCTCCAGGAGGACGCTTaGCACCACAGCCGGGGTGGT +
Preference number: 5 (lower is better)
Translates to: GHIFSPNVIVNMLVAQVGLQEDA*HHSRGG
Trigger: ACCACCCCGGCTGTGGTGCAAAGCGTCCTCCTGGAG...CCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS TCA 90 bp AAGAACAAAGTTGCCTGCTTGGGGATCTGGAGCTTTGCCACGGTCTaGCAGGACACACGGGGAGGTCTTGGTCTTGCAGGAGTGCGACTG +
Preference number: 5 (lower is better)
Translates to: KNKVACLGIWSFATV*QDTRGGLGLAGVRL
Trigger: CAGTCGCACTCCTGCAAGACCAAGACCTCCCCGTGTGTCCTGTCAGACCGTGGCAAAGCTCCAGATCCCCAAGCAGGCAACTTTGTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS GCA 90 bp GAGGATGTCCTCCAGTACAGGTTCCAGTCCTCCGCGTTCTGCTCCTaGTTATCAAACTTATTCCACCCCCTCTCCAGGAGGACGCTTTGC +
Preference number: 5 (lower is better)
Translates to: EDVLQYRFQSSAFCS*LSNLFHPLSRRTLC
Trigger: GCAAAGCGTCCTCCTGGAGAGGGGGTGGAATAAGTTTGATAAGCAGGAGCAGAACGCGGAGGACTGGAACCTGTACTGGAGGACATCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS GCA 90 bp CGGAAAGAGGATGTCCTCCAGTACAGGTTCCAGTCCTCCGCGTTCTaGTCCTGCTTATCAAACTTATTCCACCCCCTCTCCAGGAGGACG +
Preference number: 5 (lower is better)
Translates to: RKEDVLQYRFQSSAF*SCLSNLFHPLSRRT
Trigger: CGTCCTCCTGGAGAGGGGGTGGAATAAGTTTGATAAGCAGGAGCAGAACGCGGAGGACTGGAACCTGTACTGGAGGACATCCTCTTTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp GGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGGGGGAGGTCTTGGTCTaGCAGGAGTGCGACTGGAAG +
Preference number: 5 (lower is better)
Translates to: GHIFSPNVIVNMLVAQVGGEVLV*QECDWK
Trigger: CTTCCAGTCGCACTCCTGCAAGACCAAGACCTCCCC...CCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCC
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp GATGCCCCCACAGGGAGCTCTTTGGTGCAAAGTCTGATTTCAAGCCCAGGATTTACACACGGGGAGGTCTaGGTCTTGCAGGAGTGCGAC +
Preference number: 5 (lower is better)
Translates to: DAPTGSSLVQSLISSPGFTHGEV*VLQECD
Trigger: GTCGCACTCCTGCAAGACCAAGACCTCCCCGTGTGT...AAATCCTGGGCTTGAAATCAGACTTTGCACCAAAGAGCTCCCTGTGGGGGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS CCA 90 bp CTGCTCAGTGTGGTTTGCCTCGGATGGAATGTTAAGGGTAAAGGCTaGGGTGGTGGTTCTCAAAGATCCCAGCGCCTGGCTTTGTGTGGA +
Preference number: 5 (lower is better)
Translates to: LLSVVCLGWNVKGKG*GGGSQRSQRLALCG
Trigger: TCCACACAAAGCCAGGCGCTGGGATCTTTGAGAACCACCACCCCAGCCTTTACCCTTAACATTCCATCCGAGGCAAACCACACTGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239587.10
ENST00000515138.1
CDS-3UTR CAA 90 bp GGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGGCGACAGAGCAAGACTaGGTGGGAGGCTGTGTGGTA +
Preference number: 5 (lower is better)
Translates to: GHIFSPNVIVNMLVAQVGATEQD*VGGCVV
Trigger: TACCACACAGCCTCCCACCAAGTCTTGCTCTGTCGC...CCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515138.1
CDS TCA 90 bp CTCCGTAACTTGGGCTTGCTTTGTGGCATCTCCCTTGTTGACAGATaGAAATCCTGCCCACTCATCTCTCCTTCCAGCTGGGAGGCAGGT +
Preference number: 5 (lower is better)
Translates to: LRNLGLLCGISLVDR*KSCPLISPSSWEAG
Trigger: ACCTGCCTCCCAGCTGGAAGGAGAGATGAGTGGGCAGGATTTTCATCTGTCAACAAGGGAGATGCCACAAAGCAAGCCCAAGTTACGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp CACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGACTTCCCAGCGCCTGGCTTaGTGTGGAGGAACACAGGTC +
Preference number: 5 (lower is better)
Translates to: HIFSPNVIVNMLVAQVGTSQRLA*CGGTQV
Trigger: GACCTGTGTTCCTCCACACAAAGCCAGGCGCTGGGA...AGTCCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGGGGAGGTCTTGGTCTaGCAGGAGTGCGACTGGAAG +
Preference number: 5 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQGEVLV*QECDWK
Trigger: CTTCCAGTCGCACTCCTGCAAGACCAAGACCTCCCC...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp GGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGAACAAAGTTGCCTGCTaGGGGATCTGGAGCTTTGCC +
Preference number: 5 (lower is better)
Translates to: GHIFSPNVIVNMLVAQVGNKVAC*GIWSFA
Trigger: GGCAAAGCTCCAGATCCCCAAGCAGGCAACTTTGTT...CCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp GTAAAGGCTGGGGTGGTGGTTCTCAAAGATCTTGATGATATTCCTGGGTGTATGACCCAGCGCCTGGCTTaGTGTGGAGGAACACAGGTC +
Preference number: 5 (lower is better)
Translates to: VKAGVVVLKDLDDIPGCMTQRLA*CGGTQV
Trigger: GACCTGTGTTCCTCCACACAAAGCCAGGCGCTGGGT...CATACACCCAGGAATATCATCAAGATCTTTGAGAACCACCACCCCAGCCTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512917.1
CDS GCA 90 bp CAGTCTTTCCTGGTAAGCTTGGTGGTTCCAGGGTGGTGGTTTAGCTaGTGCCACGGTTTAACACTGTTGTGTTCGGTCATTCGGAAAGAG +
Preference number: 5 (lower is better)
Translates to: QSFLVSLVVPGWWFS*CHGLTLLCSVIRKE
Trigger: CTCTTTCCGAATGACCGAACACAACAGTGTTAAACCGTGGCAGCAGCTAAACCACCACCCTGGAACCACCAAGCTTACCAGGAAAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS GCA 90 bp AGGGGGATGAACTGGTACAGGGAAGTGCCATACATCCTCCTCATGTaGTTCAGGTGTTTGGCCAAACAGTCTTTCCTGGTAAGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: RGMNWYREVPYILLM*FRCLAKQSFLVSLV
Trigger: CACCAAGCTTACCAGGAAAGACTGTTTGGCCAAACACCTGAAGCACATGAGGAGGATGTATGGCACTTCCCTGTACCAGTTCATCCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CCA 90 bp TGTTTGGCCAAACAGTCTTTCCTGGTAAGCTTGGTGGTTCCAGGGTaGTGGTTTAGCTGCTGCCACGGTTTAACACTGTTGTGTTCGGTC +
Preference number: 5 (lower is better)
Translates to: CLAKQSFLVSLVVPG*WFSCCHGLTLLCSV
Trigger: GACCGAACACAACAGTGTTAAACCGTGGCAGCAGCTAAACCACCACCCTGGAACCACCAAGCTTACCAGGAAAGACTGTTTGGCCAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp AGCCCAGGATTTGTAAACAACAGAGTCATTAGGGCTTTCAGTGATTTATCTCACCTGCTTCCTGTAGCCTaGCTCCCAGGCCTGCAGGCG +
Preference number: 5 (lower is better)
Translates to: SPGFVNNRVIRAFSDLSHLLPVA*LPGLQA
Trigger: CGCCTGCAGGCCTGGGAGCAAGGCTACAGGAAGCAG...GTGAGATAAATCACTGAAAGCCCTAATGACTCTGTTGTTTACAAATCCTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR CAA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGTGGGGATCTGGAGCTTaGCCACGGTCTGACAGGACA +
Preference number: 5 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQWGSGA*PRSDRT
Trigger: TGTCCTGTCAGACCGTGGCAAAGCTCCAGATCCCCA...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS GCA 90 bp TCTTTCCTGGTAAGCTTGGTGGTTCCAGGGTGGTGGTTTAGCTGCTaGCACGGTTTAACACTGTTGTGTTCGGTCATTCGGAAAGAGGAT +
Preference number: 5 (lower is better)
Translates to: SFLVSLVVPGWWFSC*HGLTLLCSVIRKED
Trigger: ATCCTCTTTCCGAATGACCGAACACAACAGTGTTAAACCGTGGCAGCAGCTAAACCACCACCCTGGAACCACCAAGCTTACCAGGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CCA 90 bp TTGGCCAAACAGTCTTTCCTGGTAAGCTTGGTGGTTCCAGGGTGGTaGTTTAGCTGCTGCCACGGTTTAACACTGTTGTGTTCGGTCATT +
Preference number: 5 (lower is better)
Translates to: LAKQSFLVSLVVPGW*FSCCHGLTLLCSVI
Trigger: AATGACCGAACACAACAGTGTTAAACCGTGGCAGCAGCTAAACCACCACCCTGGAACCACCAAGCTTACCAGGAAAGACTGTTTGGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CCA 90 bp TCCCACGAGATAACTCAGCAGGCTTGCAAATCCAATAGCTATGCTTaGTGCCCAGCATCTGCCTCTCCTGAAAGTATTCAGCCACGAACT +
Preference number: 5 (lower is better)
Translates to: SHEITQQACKSNSYA*CPASASPESIQPRT
Trigger: AGTTCGTGGCTGAATACTTTCAGGAGAGGCAGATGCTGGGCACCAAGCATAGCTATTGGATTTGCAAGCCTGCTGAGTTATCTCGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CCA 90 bp GGGACAGATGGTGCAATGGCGAGAATGGTGAGAATAACCATGCGGTaGATTTTCTTCCACAAAAGCAGATCGTCCACATCCCAGCTACGA +
Preference number: 5 (lower is better)
Translates to: GTDGAMARMVRITMR*IFFHKSRSSTSQLR
Trigger: TCGTAGCTGGGATGTGGACGATCTGCTTTTGTGGAAGAAAATCCACCGCATGGTTATTCTCACCATTCTCGCCATTGCACCATCTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CCA 90 bp CAGGAGCATCAAGCCCACCTCTGTCACTTTTTGCAGCGTCGATGTTaGAATTTCCATGTGTGGCATTACTGGCTTCTCTCCCCTCATTTC +
Preference number: 5 (lower is better)
Translates to: QEHQAHLCHFLQRRC*NFHVWHYWLLSPHF
Trigger: GAAATGAGGGGAGAGAAGCCAGTAATGCCACACATGGAAATTCCAACATCGACGCTGCAAAAAGTGACAGAGGTGGGCTTGATGCTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGTCTTTCCTGGTAAGCTaGGTGGTTCCAGGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQSFLVS*VVPGWW
Trigger: CCACCACCCTGGAACCACCAAGCTTACCAGGAAAGA...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp GGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGATGTGCTTCAGGTGTTaGGCCAAACAGTCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: GHIFSPNVIVNMLVAQVGMCFRC*AKQSFL
Trigger: CAGGAAAGACTGTTTGGCCAAACACCTGAAGCACAT...CCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp TATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCAACACACGGGGAGGTCTaGGTCTTGCAGGAGTGCGAC +
Preference number: 5 (lower is better)
Translates to: YTYGHIFSPNVIVNMLVATHGEV*VLQECD
Trigger: GTCGCACTCCTGCAAGACCAAGACCTCCCCGTGTGT...TGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp CACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGACTAACAAAGTTGCCTGCTaGGGGATCTGGAGCTTTGCC +
Preference number: 5 (lower is better)
Translates to: HIFSPNVIVNMLVAQVGTNKVAC*GIWSFA
Trigger: GGCAAAGCTCCAGATCCCCAAGCAGGCAACTTTGTT...AGTCCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp TGTCAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATACTGCTTCCTGTAGCCTaGCTCCCAGGCCTGCAGGCG +
Preference number: 5 (lower is better)
Translates to: CQSCYIYTYGHIFSPNVILLPVA*LPGLQA
Trigger: CGCCTGCAGGCCTGGGAGCAAGGCTACAGGAAGCAG...TATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239587.10
ENST00000515138.1
CDS-3UTR CAA 90 bp CTCTTTGGTGCAAAGTCTGATTTCAAGCCCAGGATTTGTAAACAACAGAGTCATTCTTCTTCTCCAGTGTaGGTGTTGGGCGGCCTCGCC +
Preference number: 5 (lower is better)
Translates to: LFGAKSDFKPRICKQQSHSSSPV*VLGGLA
Trigger: GGCGAGGCCGCCCAACACCAACACTGGAGAAGAAGA...ATGACTCTGTTGTTTACAAATCCTGGGCTTGAAATCAGACTTTGCACCAAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR CAA 90 bp CAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTCTCCAGGAGGACGCTTaGCACCACAGCCGGGGTGGT +
Preference number: 5 (lower is better)
Translates to: QSCYIYTYGHIFSPNVIVLQEDA*HHSRGG
Trigger: ACCACCCCGGCTGTGGTGCAAAGCGTCCTCCTGGAG...AACTATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp GGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGCACGGTTTAACACTGTaGTGTTCGGTCATTCGGAAA +
Preference number: 5 (lower is better)
Translates to: GHIFSPNVIVNMLVAQVGHGLTL*CSVIRK
Trigger: TTTCCGAATGACCGAACACAACAGTGTTAAACCGTG...CCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp CACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGACTGAGGCCCCGGATTTATaGATGCTGCTGTTGGTCAAA +
Preference number: 5 (lower is better)
Translates to: HIFSPNVIVNMLVAQVGTEAPDL*MLLLVK
Trigger: TTTGACCAACAGCAGCATCAATAAATCCGGGGCCTC...AGTCCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp GGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGTCACCAACACATCTGTaGAACAATCCAAGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: GHIFSPNVIVNMLVAQVGSPTHL*NNPRSR
Trigger: CCTTGACCTTGGATTGTTCAACAGATGTGTTGGTGA...CCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp GATGCCCCCACAGGGAGCTCTTTGGTGCAAAGTCTGATTTCAAGCCCAGGATTTACAGAGTCATCCTCGTaGTACATTCTGCTTGTGAAC +
Preference number: 5 (lower is better)
Translates to: DAPTGSSLVQSLISSPGFTESSS*YILLVN
Trigger: GTTCACAAGCAGAATGTACAACGAGGATGACTCTGT...AAATCCTGGGCTTGAAATCAGACTTTGCACCAAAGAGCTCCCTGTGGGGGCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR CAA 90 bp TATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCATGGGGATCTGGAGCTTaGCCACGGTCTGACAGGACA +
Preference number: 5 (lower is better)
Translates to: YTYGHIFSPNVIVNMLVAWGSGA*PRSDRT
Trigger: TGTCCTGTCAGACCGTGGCAAAGCTCCAGATCCCCA...TGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGAACAAAGTTGCCTGCTaGGGGATCTGGAGCTTTGCC +
Preference number: 5 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQNKVAC*GIWSFA
Trigger: GGCAAAGCTCCAGATCCCCAAGCAGGCAACTTTGTT...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp GGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGAAAACAAGAACAAAGTaGCCTGCTTGGGGATCTGGA +
Preference number: 5 (lower is better)
Translates to: GHIFSPNVIVNMLVAQVGKTRTK*PAWGSG
Trigger: TCCAGATCCCCAAGCAGGCAACTTTGTTCTTGTTTT...CCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS GCA 90 bp ATAAGGAAGACAGTCAGGAGCATCAAGCCCACCTCTGTCACTTTTTaGAGCGTCGATGTTGGAATTTCCATGTGTGGCATTACTGGCTTC +
Preference number: 5 (lower is better)
Translates to: IRKTVRSIKPTSVTF*SVDVGISMCGITGF
Trigger: GAAGCCAGTAATGCCACACATGGAAATTCCAACATCGACGCTGCAAAAAGTGACAGAGGTGGGCTTGATGCTCCTGACTGTCTTCCTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp CACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGACTATGTGCTTCAGGTGTTaGGCCAAACAGTCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: HIFSPNVIVNMLVAQVGTMCFRC*AKQSFL
Trigger: CAGGAAAGACTGTTTGGCCAAACACCTGAAGCACAT...AGTCCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp CACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGACTCACCTCTGTCACTTTTaGCAGCGTCGATGTTGGAAT +
Preference number: 5 (lower is better)
Translates to: HIFSPNVIVNMLVAQVGTHLCHF*QRRCWN
Trigger: ATTCCAACATCGACGCTGCAAAAAGTGACAGAGGTG...AGTCCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp TATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCATGCCTGCTCCGTAACTaGGGCTTGCTTTGTGGCATC +
Preference number: 5 (lower is better)
Translates to: YTYGHIFSPNVIVNMLVACLLRN*GLLCGI
Trigger: GATGCCACAAAGCAAGCCCAAGTTACGGAGCAGGCA...TGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp TTAAGGGTAAAGGCTGGGGTGGTGGTTCTCAAAGATCTTGATGATATTCCTGGGAGAGCAACTTTCCATTaGACCGGGATCCAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: LRVKAGVVVLKDLDDIPGRATFH*TGIQLK
Trigger: CTTCAGCTGGATCCCGGTCAAATGGAAAGTTGCTCT...CCCAGGAATATCATCAAGATCTTTGAGAACCACCACCCCAGCCTTTACCCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512917.1
CDS TCA 90 bp CAGCTTTCTCCACCACAGAGTCATCCTCGTTGTACATTCTGCTTGTaGACGAAAGAGAATCATAAGGAAGACAGTCAGGAGCATCAAGCC +
Preference number: 5 (lower is better)
Translates to: QLSPPQSHPRCTFCL*TKENHKEDSQEHQA
Trigger: GGCTTGATGCTCCTGACTGTCTTCCTTATGATTCTCTTTCGTTCACAAGCAGAATGTACAACGAGGATGACTCTGTGGTGGAGAAAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS GCA 90 bp AAACCCAAAGAGCTCAAAGCAATTGGCAGCAAAGGGGACAGATGGTaGAATGGCGAGAATGGTGAGAATAACCATGCGGTGGATTTTCTT +
Preference number: 5 (lower is better)
Translates to: KPKELKAIGSKGDRW*NGENGENNHAVDFL
Trigger: AAGAAAATCCACCGCATGGTTATTCTCACCATTCTCGCCATTGCACCATCTGTCCCCTTTGCTGCCAATTGCTTTGAGCTCTTTGGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CCA 90 bp ATCAAACCCAAAGAGCTCAAAGCAATTGGCAGCAAAGGGGACAGATaGTGCAATGGCGAGAATGGTGAGAATAACCATGCGGTGGATTTT +
Preference number: 5 (lower is better)
Translates to: IKPKELKAIGSKGDR*CNGENGENNHAVDF
Trigger: AAAATCCACCGCATGGTTATTCTCACCATTCTCGCCATTGCACCATCTGTCCCCTTTGCTGCCAATTGCTTTGAGCTCTTTGGGTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp CAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTTCCCAGCGCCTGGCTTaGTGTGGAGGAACACAGGTC +
Preference number: 5 (lower is better)
Translates to: QSCYIYTYGHIFSPNVIVSQRLA*CGGTQV
Trigger: GACCTGTGTTCCTCCACACAAAGCCAGGCGCTGGGA...AACTATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp CAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTTCTTCTTCTCCAGTGTaGGTGTTGGGCGGCCTCGCC +
Preference number: 5 (lower is better)
Translates to: QSCYIYTYGHIFSPNVIVSSSPV*VLGGLA
Trigger: GGCGAGGCCGCCCAACACCAACACTGGAGAAGAAGA...AACTATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239587.10
ENST00000515138.1
CDS-3UTR CAA 90 bp CTGATTTCAAGCCCAGGATTTGTAAACAACAGAGTCATTAGGGCTTTCAGTGATTCTTTCCTGGTAAGCTaGGTGGTTCCAGGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: LISSPGFVNNRVIRAFSDSFLVS*VVPGWW
Trigger: CCACCACCCTGGAACCACCAAGCTTACCAGGAAAGA...ATCACTGAAAGCCCTAATGACTCTGTTGTTTACAAATCCTGGGCTTGAAATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR CAA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGATGTGCTTCAGGTGTTaGGCCAAACAGTCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQMCFRC*AKQSFL
Trigger: CAGGAAAGACTGTTTGGCCAAACACCTGAAGCACAT...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGCACCTCTGTCACTTTTaGCAGCGTCGATGTTGGAAT +
Preference number: 5 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQHLCHF*QRRCWN
Trigger: ATTCCAACATCGACGCTGCAAAAAGTGACAGAGGTG...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp CACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGACTACAGAGTCATCCTCGTaGTACATTCTGCTTGTGAAC +
Preference number: 5 (lower is better)
Translates to: HIFSPNVIVNMLVAQVGTTESSS*YILLVN
Trigger: GTTCACAAGCAGAATGTACAACGAGGATGACTCTGT...AGTCCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp CCCCTAAGCCACCAATCTGCTTTTGATGGATTTGCCAATTCTGACATTCCATATCTCCGTAACTTGGGCTaGCTTTGTGGCATCTCCCTT +
Preference number: 5 (lower is better)
Translates to: PLSHQSAFDGFANSDIPYLRNLG*LCGISL
Trigger: AAGGGAGATGCCACAAAGCAAGCCCAAGTTACGGAG...ATATGGAATGTCAGAATTGGCAAATCCATCAAAAGCAGATTGGTGGCTTAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR CAA 90 bp TATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACTCCGTAACTTGGGCTaGCTTTGTGGCATCTCCCTT +
Preference number: 5 (lower is better)
Translates to: YTYGHIFSPNVIVNMLVALRNLG*LCGISL
Trigger: AAGGGAGATGCCACAAAGCAAGCCCAAGTTACGGAG...TGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp TGTCAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATAACACACGGGGAGGTCTaGGTCTTGCAGGAGTGCGAC +
Preference number: 5 (lower is better)
Translates to: CQSCYIYTYGHIFSPNVITHGEV*VLQECD
Trigger: GTCGCACTCCTGCAAGACCAAGACCTCCCCGTGTGT...TATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp CCCCTAAGCCACCAATCTGCTTTTGATGGATTTGCCAATTCTGACATTCCATATGAGGCCCCGGATTTATaGATGCTGCTGTTGGTCAAA +
Preference number: 5 (lower is better)
Translates to: PLSHQSAFDGFANSDIPYEAPDL*MLLLVK
Trigger: TTTGACCAACAGCAGCATCAATAAATCCGGGGCCTC...ATATGGAATGTCAGAATTGGCAAATCCATCAAAAGCAGATTGGTGGCTTAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR CAA 90 bp GGTAAACAAATGGTGACAAGGCCAAGGGGCCACTATTTAAATACAGCCCAAAGACACCTCTGTCACTTTTaGCAGCGTCGATGTTGGAAT +
Preference number: 5 (lower is better)
Translates to: GKQMVTRPRGHYLNTAQRHLCHF*QRRCWN
Trigger: ATTCCAACATCGACGCTGCAAAAAGTGACAGAGGTG...TCTTTGGGCTGTATTTAAATAGTGGCCCCTTGGCCTTGTCACCATTTGTTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR CAA 90 bp TGTCAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATATGGGGATCTGGAGCTTaGCCACGGTCTGACAGGACA +
Preference number: 5 (lower is better)
Translates to: CQSCYIYTYGHIFSPNVIWGSGA*PRSDRT
Trigger: TGTCCTGTCAGACCGTGGCAAAGCTCCAGATCCCCA...TATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGAAAACAAGAACAAAGTaGCCTGCTTGGGGATCTGGA +
Preference number: 5 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQKTRTK*PAWGSG
Trigger: TCCAGATCCCCAAGCAGGCAACTTTGTTCTTGTTTT...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CCA 90 bp CACCTCTGTCACTTTTTGCAGCGTCGATGTTGGAATTTCCATGTGTaGCATTACTGGCTTCTCTCCCCTCATTTCTTAGACCATTTAAGT +
Preference number: 5 (lower is better)
Translates to: HLCHFLQRRCWNFHV*HYWLLSPHFLDHLS
Trigger: ACTTAAATGGTCTAAGAAATGAGGGGAGAGAAGCCAGTAATGCCACACATGGAAATTCCAACATCGACGCTGCAAAAAGTGACAGAGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp CAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTTCTTTCCTGGTAAGCTaGGTGGTTCCAGGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: QSCYIYTYGHIFSPNVIVSFLVS*VVPGWW
Trigger: CCACCACCCTGGAACCACCAAGCTTACCAGGAAAGA...AACTATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp TATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCATTTGCAGCGTCGATGTaGGAATTTCCATGTGTGGCA +
Preference number: 5 (lower is better)
Translates to: YTYGHIFSPNVIVNMLVAFAASM*EFPCVA
Trigger: TGCCACACATGGAAATTCCAACATCGACGCTGCAAA...TGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGTTTGTGGCATCTCCCTaGTTGACAGATGAAAATCCT +
Preference number: 5 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQFVASP*LTDENP
Trigger: AGGATTTTCATCTGTCAACAAGGGAGATGCCACAAA...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp CACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGGTAGGGACTCCGAGAGTTGCTTCATaGAAAGGAAAAACAAGAACA +
Preference number: 5 (lower is better)
Translates to: HIFSPNVIVNMLVAQVGTPRVAS*KGKTRT
Trigger: TGTTCTTGTTTTTCCTTTCAATGAAGCAACTCTCGG...AGTCCCTACCTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp CTCTTTGGTGCAAAGTCTGATTTCAAGCCCAGGATTTGTAAACAACAGAGTCATCCCACAGGGAGCTCTTaGGTGCAAAGTCTGATTTCA +
Preference number: 5 (lower is better)
Translates to: LFGAKSDFKPRICKQQSHPTGSS*VQSLIS
Trigger: TGAAATCAGACTTTGCACCAAAGAGCTCCCTGTGGG...ATGACTCTGTTGTTTACAAATCCTGGGCTTGAAATCAGACTTTGCACCAAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR CAA 90 bp TATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCATCACCAACACATCTGTaGAACAATCCAAGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: YTYGHIFSPNVIVNMLVASPTHL*NNPRSR
Trigger: CCTTGACCTTGGATTGTTCAACAGATGTGTTGGTGA...TGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp TATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCAACAGAGTCATCCTCGTaGTACATTCTGCTTGTGAAC +
Preference number: 5 (lower is better)
Translates to: YTYGHIFSPNVIVNMLVATESSS*YILLVN
Trigger: GTTCACAAGCAGAATGTACAACGAGGATGACTCTGT...TGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp TTGTGCAACCATCACCTCTATATAGTTCCAGAACATTTCTGTCACCCCAAAGGGTTTGTGGCATCTCCCTaGTTGACAGATGAAAATCCT +
Preference number: 5 (lower is better)
Translates to: LCNHHLYIVPEHFCHPKGFVASP*LTDENP
Trigger: AGGATTTTCATCTGTCAACAAGGGAGATGCCACAAA...CCCTTTGGGGTGACAGAAATGTTCTGGAACTATATAGAGGTGATGGTTGCACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR CAA 90 bp TGTCAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATACTCCGTAACTTGGGCTaGCTTTGTGGCATCTCCCTT +
Preference number: 5 (lower is better)
Translates to: CQSCYIYTYGHIFSPNVILRNLG*LCGISL
Trigger: AAGGGAGATGCCACAAAGCAAGCCCAAGTTACGGAG...TATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp GTAAAGGCTGGGGTGGTGGTTCTCAAAGATCTTGATGATATTCCTGGGTGTATGTGGTTCTCAAAGATCTaGATGATATTCCTGGGTGTA +
Preference number: 5 (lower is better)
Translates to: VKAGVVVLKDLDDIPGCMWFSKI*MIFLGV
Trigger: TACACCCAGGAATATCATCAAGATCTTTGAGAACCA...CATACACCCAGGAATATCATCAAGATCTTTGAGAACCACCACCCCAGCCTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512917.1
CDS-3UTR CAA 90 bp TGTCAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATAGAGGCCCCGGATTTATaGATGCTGCTGTTGGTCAAA +
Preference number: 5 (lower is better)
Translates to: CQSCYIYTYGHIFSPNVIEAPDL*MLLLVK
Trigger: TTTGACCAACAGCAGCATCAATAAATCCGGGGCCTC...TATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp TGTCAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATAGTGGCATCTCCCTTGTaGACAGATGAAAATCCTGCC +
Preference number: 5 (lower is better)
Translates to: CQSCYIYTYGHIFSPNVIVASPL*TDENPA
Trigger: GGCAGGATTTTCATCTGTCAACAAGGGAGATGCCAC...TATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp ACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAACATGCTGGTGGCACAGAACTCCTGGCTTCTTTaGTACTGTTTTCACCTAATA +
Preference number: 5 (lower is better)
Translates to: TYGHIFSPNVIVNMLVAQNSWLL*YCFHLI
Trigger: TATTAGGTGAAAACAGTACAAAAGAAGCCAGGAGTT...CTGTGCCACCAGCATGTTAACTATGACATTGGGACTGAAGATGTGGCCATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR CAA 90 bp CTCTTTGGTGCAAAGTCTGATTTCAAGCCCAGGATTTGTAAACAACAGAGTCATGCCACCAATCTGCTTTaGATGGATTTGCCAATTCTG +
Preference number: 5 (lower is better)
Translates to: LFGAKSDFKPRICKQQSHATNLL*MDLPIL
Trigger: CAGAATTGGCAAATCCATCAAAAGCAGATTGGTGGC...ATGACTCTGTTGTTTACAAATCCTGGGCTTGAAATCAGACTTTGCACCAAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR CAA 90 bp TGTCAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATATTTGCAGCGTCGATGTaGGAATTTCCATGTGTGGCA +
Preference number: 5 (lower is better)
Translates to: CQSCYIYTYGHIFSPNVIFAASM*EFPCVA
Trigger: TGCCACACATGGAAATTCCAACATCGACGCTGCAAA...TATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp CCCCTAAGCCACCAATCTGCTTTTGATGGATTTGCCAATTCTGACATTCCATATCCGAGAGTTGCTTCATaGAAAGGAAAAACAAGAACA +
Preference number: 5 (lower is better)
Translates to: PLSHQSAFDGFANSDIPYPRVAS*KGKTRT
Trigger: TGTTCTTGTTTTTCCTTTCAATGAAGCAACTCTCGG...ATATGGAATGTCAGAATTGGCAAATCCATCAAAAGCAGATTGGTGGCTTAGGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR CAA 90 bp CCCCTAAGCCACCAATCTGCTTTTGATGGATTTGCCAATTCTGACATTCCATATCTGCTTTTGATGGATTaGCCAATTCTGACATTCCAT +
Preference number: 5 (lower is better)
Translates to: PLSHQSAFDGFANSDIPYLLLMD*PILTFH
Trigger: ATGGAATGTCAGAATTGGCAAATCCATCAAAAGCAG...ATATGGAATGTCAGAATTGGCAAATCCATCAAAAGCAGATTGGTGGCTTAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR CAA 90 bp AATCTGCTTTTGATGGATTTGCCAATTCTGACATTCCATATCAACGGAGTCATACACGGTTTAACACTGTaGTGTTCGGTCATTCGGAAA +
Preference number: 5 (lower is better)
Translates to: NLLLMDLPILTFHINGVIHGLTL*CSVIRK
Trigger: TTTCCGAATGACCGAACACAACAGTGTTAAACCGTG...TATGACTCCGTTGATATGGAATGTCAGAATTGGCAAATCCATCAAAAGCAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239587.10
CDS-3UTR CAA 90 bp CAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTCACGGTTTAACACTGTaGTGTTCGGTCATTCGGAAA +
Preference number: 5 (lower is better)
Translates to: QSCYIYTYGHIFSPNVIVHGLTL*CSVIRK
Trigger: TTTCCGAATGACCGAACACAACAGTGTTAAACCGTG...AACTATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp TGTCAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATATCACCAACACATCTGTaGAACAATCCAAGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: CQSCYIYTYGHIFSPNVISPTHL*NNPRSR
Trigger: CCTTGACCTTGGATTGTTCAACAGATGTGTTGGTGA...TATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp CAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTAAAACAAGAACAAAGTaGCCTGCTTGGGGATCTGGA +
Preference number: 5 (lower is better)
Translates to: QSCYIYTYGHIFSPNVIVKTRTK*PAWGSG
Trigger: TCCAGATCCCCAAGCAGGCAACTTTGTTCTTGTTTT...AACTATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp CAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTTTTGTGGCATCTCCCTaGTTGACAGATGAAAATCCT +
Preference number: 5 (lower is better)
Translates to: QSCYIYTYGHIFSPNVIVFVASP*LTDENP
Trigger: AGGATTTTCATCTGTCAACAAGGGAGATGCCACAAA...AACTATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS-3UTR CAA 90 bp CAGAGCTGTTATATTTATACATATGGCCACATCTTCAGTCCCAATGTCATAGTTCCGAGAGTTGCTTCATaGAAAGGAAAAACAAGAACA +
Preference number: 5 (lower is better)
Translates to: QSCYIYTYGHIFSPNVIVPRVAS*KGKTRT
Trigger: TGTTCTTGTTTTTCCTTTCAATGAAGCAACTCTCGG...AACTATGACATTGGGACTGAAGATGTGGCCATATGTATAAATATAACAGCTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CCA 72 bp CCAGTGTTGGTGTTGGGCGGCCTCGCCTGGGAGGGATaGAAACACCTGCTTCCTGTAGCCTTGCTCCCAGGC +
Preference number: 6 (lower is better)
Translates to: PVLVLGGLAWEG*KHLLPVALLPG
Trigger: GCCTGGGAGCAAGGCTACAGGAAGCAGGTGTTTCCATCCCTCCCAGGCGAGGCCGCCCAACACCAACACTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239587.10
ENST00000515138.1
CDS CAA 72 bp GCTTTGCCACGGTCTGACAGGACACACGGGGAGGTCTaGGTCTTGCAGGAGTGCGACTGGAAGAGGGACGCG +
Preference number: 6 (lower is better)
Translates to: ALPRSDRTHGEV*VLQECDWKRDA
Trigger: CGCGTCCCTCTTCCAGTCGCACTCCTGCAAGACCAAGACCTCCCCGTGTGTCCTGTCAGACCGTGGCAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CCA 72 bp CCCTCTCCAGGAGGACGCTTTGCACCACAGCCGGGGTaGTCTCGTCAACGCGAAAAACCAGCGGCTTCAAGA +
Preference number: 6 (lower is better)
Translates to: PSPGGRFAPQPG*SRQREKPAASR
Trigger: TCTTGAAGCCGCTGGTTTTTCGCGTTGACGAGACCACCCCGGCTGTGGTGCAAAGCGTCCTCCTGGAGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CCA 72 bp CTTTGCCACGGTCTGACAGGACACACGGGGAGGTCTTaGTCTTGCAGGAGTGCGACTGGAAGAGGGACGCGT +
Preference number: 6 (lower is better)
Translates to: LCHGLTGHTGRS*SCRSATGRGTR
Trigger: ACGCGTCCCTCTTCCAGTCGCACTCCTGCAAGACCAAGACCTCCCCGTGTGTCCTGTCAGACCGTGGCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS TCA 72 bp TGCAGGAGTGCGACTGGAAGAGGGACGCGTAGGGCATaGGTGTCTTGTGAGGCGTGTGCCTGCTCCGTAACT +
Preference number: 6 (lower is better)
Translates to: CRSATGRGTRRA*VSCEACACSVT
Trigger: AGTTACGGAGCAGGCACACGCCTCACAAGACACTCATGCCCTACGCGTCCCTCTTCCAGTCGCACTCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CCA 72 bp TGGTGGTTCTCAAAGATCCCAGCGCCTGGCTTTGTGTaGAGGAACACAGGTCCCGCCCTCTCATTGGGCGCT +
Preference number: 6 (lower is better)
Translates to: WWFSKIPAPGFV*RNTGPALSLGA
Trigger: AGCGCCCAATGAGAGGGCGGGACCTGTGTTCCTCCACACAAAGCCAGGCGCTGGGATCTTTGAGAACCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239587.10
ENST00000515138.1
CDS CCA 72 bp TTTCAGGTGTCATCGAACCCAGCGCCTGGCTTTGTGTaGAGGAACACAGGTCCCGCCCTCTCATTGGGCGCT +
Preference number: 6 (lower is better)
Translates to: FQVSSNPAPGFV*RNTGPALSLGA
Trigger: AGCGCCCAATGAGAGGGCGGGACCTGTGTTCCTCCACACAAAGCCAGGCGCTGGGTTCGATGACACCTGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512917.1
CDS CAA 72 bp TGGGGTGGTGGTTCTCAAAGATCCCAGCGCCTGGCTTaGTGTGGAGGAACACAGGTCCCGCCCTCTCATTGG +
Preference number: 6 (lower is better)
Translates to: WGGGSQRSQRLA*CGGTQVPPSHW
Trigger: CCAATGAGAGGGCGGGACCTGTGTTCCTCCACACAAAGCCAGGCGCTGGGATCTTTGAGAACCACCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239587.10
ENST00000515138.1
CDS CCA 72 bp GCCTGCAGGCGGCTGCTCAGTGTGGTTTGCCTCGGATaGAATGTTAAGGGTAAAGGCTGGGGTGGTGGTTCT +
Preference number: 6 (lower is better)
Translates to: ACRRLLSVVCLG*NVKGKGWGGGS
Trigger: AGAACCACCACCCCAGCCTTTACCCTTAACATTCCATCCGAGGCAAACCACACTGAGCAGCCGCCTGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239587.10
ENST00000515138.1
CDS CCA 72 bp TCTTCTTCTCCAGTGTTGGTGTTGGGCGGCCTCGCCTaGGAGGGATGGAAACACCTGCTTCCTGTAGCCTTG +
Preference number: 6 (lower is better)
Translates to: SSSPVLVLGGLA*EGWKHLLPVAL
Trigger: CAAGGCTACAGGAAGCAGGTGTTTCCATCCCTCCCAGGCGAGGCCGCCCAACACCAACACTGGAGAAGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239587.10
ENST00000515138.1
CDS GCA 72 bp TCAAACTTATTCCACCCCCTCTCCAGGAGGACGCTTTaGACCACAGCCGGGGTGGTCTCGTCAACGCGAAAA +
Preference number: 6 (lower is better)
Translates to: SNLFHPLSRRTL*TTAGVVSSTRK
Trigger: TTTTCGCGTTGACGAGACCACCCCGGCTGTGGTGCAAAGCGTCCTCCTGGAGAGGGGGTGGAATAAGTTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS GCA 72 bp CAAGAACAAAGTTGCCTGCTTGGGGATCTGGAGCTTTaGCACGGTCTGACAGGACACACGGGGAGGTCTTGG +
Preference number: 6 (lower is better)
Translates to: QEQSCLLGDLEL*HGLTGHTGRSW
Trigger: CCAAGACCTCCCCGTGTGTCCTGTCAGACCGTGGCAAAGCTCCAGATCCCCAAGCAGGCAACTTTGTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CAA 72 bp ATCAAACTTATTCCACCCCCTCTCCAGGAGGACGCTTaGCACCACAGCCGGGGTGGTCTCGTCAACGCGAAA +
Preference number: 6 (lower is better)
Translates to: IKLIPPPLQEDA*HHSRGGLVNAK
Trigger: TTTCGCGTTGACGAGACCACCCCGGCTGTGGTGCAAAGCGTCCTCCTGGAGAGGGGGTGGAATAAGTTTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS GCA 72 bp CTCCAGTACAGGTTCCAGTCCTCCGCGTTCTGCTCCTaGTTATCAAACTTATTCCACCCCCTCTCCAGGAGG +
Preference number: 6 (lower is better)
Translates to: LQYRFQSSAFCS*LSNLFHPLSRR
Trigger: CCTCCTGGAGAGGGGGTGGAATAAGTTTGATAAGCAGGAGCAGAACGCGGAGGACTGGAACCTGTACTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CCA 72 bp GTGGTTTGCCTCGGATGGAATGTTAAGGGTAAAGGCTaGGGTGGTGGTTCTCAAAGATCCCAGCGCCTGGCT +
Preference number: 6 (lower is better)
Translates to: VVCLGWNVKGKG*GGGSQRSQRLA
Trigger: AGCCAGGCGCTGGGATCTTTGAGAACCACCACCCCAGCCTTTACCCTTAACATTCCATCCGAGGCAAACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239587.10
ENST00000515138.1
CDS CAA 72 bp ACAAGAACAAAGTTGCCTGCTTGGGGATCTGGAGCTTaGCCACGGTCTGACAGGACACACGGGGAGGTCTTG +
Preference number: 6 (lower is better)
Translates to: TRTKLPAWGSGA*PRSDRTHGEVL
Trigger: CAAGACCTCCCCGTGTGTCCTGTCAGACCGTGGCAAAGCTCCAGATCCCCAAGCAGGCAACTTTGTTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS GCA 72 bp GATGTCCTCCAGTACAGGTTCCAGTCCTCCGCGTTCTaGTCCTGCTTATCAAACTTATTCCACCCCCTCTCC +
Preference number: 6 (lower is better)
Translates to: DVLQYRFQSSAF*SCLSNLFHPLS
Trigger: GGAGAGGGGGTGGAATAAGTTTGATAAGCAGGAGCAGAACGCGGAGGACTGGAACCTGTACTGGAGGACATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CAA 90 bp TGTGCCTGCTCCGTAACTTGGGCTTGCTTTGTGGCATCTCCCTTGTaGACAGATGAAAATCCTGCCCACTCATCTCTCCTTCCAGCTGGG +
Preference number: 6 (lower is better)
Translates to: CACSVTWACFVASPL*TDENPAHSSLLPAG
Trigger: CCCAGCTGGAAGGAGAGATGAGTGGGCAGGATTTTCATCTGTCAACAAGGGAGATGCCACAAAGCAAGCCCAAGTTACGGAGCAGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CAA 90 bp GCGTGTGCCTGCTCCGTAACTTGGGCTTGCTTTGTGGCATCTCCCTaGTTGACAGATGAAAATCCTGCCCACTCATCTCTCCTTCCAGCT +
Preference number: 6 (lower is better)
Translates to: ACACSVTWACFVASP*LTDENPAHSSLLPA
Trigger: AGCTGGAAGGAGAGATGAGTGGGCAGGATTTTCATCTGTCAACAAGGGAGATGCCACAAAGCAAGCCCAAGTTACGGAGCAGGCACACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS GCA 72 bp GTAAGCTTGGTGGTTCCAGGGTGGTGGTTTAGCTGCTaGCACGGTTTAACACTGTTGTGTTCGGTCATTCGG +
Preference number: 6 (lower is better)
Translates to: VSLVVPGWWFSC*HGLTLLCSVIR
Trigger: CCGAATGACCGAACACAACAGTGTTAAACCGTGGCAGCAGCTAAACCACCACCCTGGAACCACCAAGCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CAA 72 bp GGGTGGTGGTTTAGCTGCTGCCACGGTTTAACACTGTaGTGTTCGGTCATTCGGAAAGAGGATGTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: GWWFSCCHGLTL*CSVIRKEDVLQ
Trigger: CTGGAGGACATCCTCTTTCCGAATGACCGAACACAACAGTGTTAAACCGTGGCAGCAGCTAAACCACCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CAA 72 bp TTCAGGTGTTTGGCCAAACAGTCTTTCCTGGTAAGCTaGGTGGTTCCAGGGTGGTGGTTTAGCTGCTGCCAC +
Preference number: 6 (lower is better)
Translates to: FRCLAKQSFLVS*VVPGWWFSCCH
Trigger: GTGGCAGCAGCTAAACCACCACCCTGGAACCACCAAGCTTACCAGGAAAGACTGTTTGGCCAAACACCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CAA 90 bp GTGGTTCCAGGGTGGTGGTTTAGCTGCTGCCACGGTTTAACACTGTaGTGTTCGGTCATTCGGAAAGAGGATGTCCTCCAGTACAGGTTC +
Preference number: 6 (lower is better)
Translates to: VVPGWWFSCCHGLTL*CSVIRKEDVLQYRF
Trigger: GAACCTGTACTGGAGGACATCCTCTTTCCGAATGACCGAACACAACAGTGTTAAACCGTGGCAGCAGCTAAACCACCACCCTGGAACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CAA 90 bp TGGTACAGGGAAGTGCCATACATCCTCCTCATGTGCTTCAGGTGTTaGGCCAAACAGTCTTTCCTGGTAAGCTTGGTGGTTCCAGGGTGG +
Preference number: 6 (lower is better)
Translates to: WYREVPYILLMCFRC*AKQSFLVSLVVPGW
Trigger: CCACCCTGGAACCACCAAGCTTACCAGGAAAGACTGTTTGGCCAAACACCTGAAGCACATGAGGAGGATGTATGGCACTTCCCTGTACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CAA 90 bp CTCATGTGCTTCAGGTGTTTGGCCAAACAGTCTTTCCTGGTAAGCTaGGTGGTTCCAGGGTGGTGGTTTAGCTGCTGCCACGGTTTAACA +
Preference number: 6 (lower is better)
Translates to: LMCFRCLAKQSFLVS*VVPGWWFSCCHGLT
Trigger: TGTTAAACCGTGGCAGCAGCTAAACCACCACCCTGGAACCACCAAGCTTACCAGGAAAGACTGTTTGGCCAAACACCTGAAGCACATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS TCA 72 bp TTGGGCTTGCTTTGTGGCATCTCCCTTGTTGACAGATaGAAATCCTGCCCACTCATCTCTCCTTCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: LGLLCGISLVDR*KSCPLISPSSW
Trigger: CCAGCTGGAAGGAGAGATGAGTGGGCAGGATTTTCATCTGTCAACAAGGGAGATGCCACAAAGCAAGCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS GCA 72 bp CTGGTAAGCTTGGTGGTTCCAGGGTGGTGGTTTAGCTaGTGCCACGGTTTAACACTGTTGTGTTCGGTCATT +
Preference number: 6 (lower is better)
Translates to: LVSLVVPGWWFS*CHGLTLLCSVI
Trigger: AATGACCGAACACAACAGTGTTAAACCGTGGCAGCAGCTAAACCACCACCCTGGAACCACCAAGCTTACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS GCA 72 bp GAGCTCAAAGCAATTGGCAGCAAAGGGGACAGATGGTaGAATGGCGAGAATGGTGAGAATAACCATGCGGTG +
Preference number: 6 (lower is better)
Translates to: ELKAIGSKGDRW*NGENGENNHAV
Trigger: CACCGCATGGTTATTCTCACCATTCTCGCCATTGCACCATCTGTCCCCTTTGCTGCCAATTGCTTTGAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CCA 72 bp CAGTCTTTCCTGGTAAGCTTGGTGGTTCCAGGGTGGTaGTTTAGCTGCTGCCACGGTTTAACACTGTTGTGT +
Preference number: 6 (lower is better)
Translates to: QSFLVSLVVPGW*FSCCHGLTLLC
Trigger: ACACAACAGTGTTAAACCGTGGCAGCAGCTAAACCACCACCCTGGAACCACCAAGCTTACCAGGAAAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS GCA 72 bp TTAGTATCCCCCTCCCACGAGATAACTCAGCAGGCTTaGAAATCCAATAGCTATGCTTGGTGCCCAGCATCT +
Preference number: 6 (lower is better)
Translates to: LVSPSHEITQQA*KSNSYAWCPAS
Trigger: AGATGCTGGGCACCAAGCATAGCTATTGGATTTGCAAGCCTGCTGAGTTATCTCGTGGGAGGGGGATACTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS GCA 72 bp TCTTGTGAGGCGTGTGCCTGCTCCGTAACTTGGGCTTaGTTTGTGGCATCTCCCTTGTTGACAGATGAAAAT +
Preference number: 6 (lower is better)
Translates to: SCEACACSVTWA*FVASPLLTDEN
Trigger: ATTTTCATCTGTCAACAAGGGAGATGCCACAAAGCAAGCCCAAGTTACGGAGCAGGCACACGCCTCACAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CCA 72 bp AAACAGTCTTTCCTGGTAAGCTTGGTGGTTCCAGGGTaGTGGTTTAGCTGCTGCCACGGTTTAACACTGTTG +
Preference number: 6 (lower is better)
Translates to: KQSFLVSLVVPG*WFSCCHGLTLL
Trigger: CAACAGTGTTAAACCGTGGCAGCAGCTAAACCACCACCCTGGAACCACCAAGCTTACCAGGAAAGACTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CCA 72 bp CAAGCCCACCTCTGTCACTTTTTGCAGCGTCGATGTTaGAATTTCCATGTGTGGCATTACTGGCTTCTCTCC +
Preference number: 6 (lower is better)
Translates to: QAHLCHFLQRRC*NFHVWHYWLLS
Trigger: GGAGAGAAGCCAGTAATGCCACACATGGAAATTCCAACATCGACGCTGCAAAAAGTGACAGAGGTGGGCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CAA 72 bp GACAGTCAGGAGCATCAAGCCCACCTCTGTCACTTTTaGCAGCGTCGATGTTGGAATTTCCATGTGTGGCAT +
Preference number: 6 (lower is better)
Translates to: DSQEHQAHLCHF*QRRCWNFHVWH
Trigger: ATGCCACACATGGAAATTCCAACATCGACGCTGCAAAAAGTGACAGAGGTGGGCTTGATGCTCCTGACTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CAA 72 bp TGCTCCGTAACTTGGGCTTGCTTTGTGGCATCTCCCTaGTTGACAGATGAAAATCCTGCCCACTCATCTCTC +
Preference number: 6 (lower is better)
Translates to: CSVTWACFVASP*LTDENPAHSSL
Trigger: GAGAGATGAGTGGGCAGGATTTTCATCTGTCAACAAGGGAGATGCCACAAAGCAAGCCCAAGTTACGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CAA 90 bp TCAGGAGCATCAAGCCCACCTCTGTCACTTTTTGCAGCGTCGATGTaGGAATTTCCATGTGTGGCATTACTGGCTTCTCTCCCCTCATTT +
Preference number: 6 (lower is better)
Translates to: SGASSPPLSLFAASM*EFPCVALLASLPSF
Trigger: AAATGAGGGGAGAGAAGCCAGTAATGCCACACATGGAAATTCCAACATCGACGCTGCAAAAAGTGACAGAGGTGGGCTTGATGCTCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS GCA 72 bp AACTGGTACAGGGAAGTGCCATACATCCTCCTCATGTaGTTCAGGTGTTTGGCCAAACAGTCTTTCCTGGTA +
Preference number: 6 (lower is better)
Translates to: NWYREVPYILLM*FRCLAKQSFLV
Trigger: TACCAGGAAAGACTGTTTGGCCAAACACCTGAAGCACATGAGGAGGATGTATGGCACTTCCCTGTACCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS GCA 72 bp ACAGTCAGGAGCATCAAGCCCACCTCTGTCACTTTTTaGAGCGTCGATGTTGGAATTTCCATGTGTGGCATT +
Preference number: 6 (lower is better)
Translates to: TVRSIKPTSVTF*SVDVGISMCGI
Trigger: AATGCCACACATGGAAATTCCAACATCGACGCTGCAAAAAGTGACAGAGGTGGGCTTGATGCTCCTGACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CCA 72 bp GGTGCAATGGCGAGAATGGTGAGAATAACCATGCGGTaGATTTTCTTCCACAAAAGCAGATCGTCCACATCC +
Preference number: 6 (lower is better)
Translates to: GAMARMVRITMR*IFFHKSRSSTS
Trigger: GGATGTGGACGATCTGCTTTTGTGGAAGAAAATCCACCGCATGGTTATTCTCACCATTCTCGCCATTGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CCA 72 bp AAAGAGCTCAAAGCAATTGGCAGCAAAGGGGACAGATaGTGCAATGGCGAGAATGGTGAGAATAACCATGCG +
Preference number: 6 (lower is better)
Translates to: KELKAIGSKGDR*CNGENGENNHA
Trigger: CGCATGGTTATTCTCACCATTCTCGCCATTGCACCATCTGTCCCCTTTGCTGCCAATTGCTTTGAGCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CAA 72 bp GAAGTGCCATACATCCTCCTCATGTGCTTCAGGTGTTaGGCCAAACAGTCTTTCCTGGTAAGCTTGGTGGTT +
Preference number: 6 (lower is better)
Translates to: EVPYILLMCFRC*AKQSFLVSLVV
Trigger: AACCACCAAGCTTACCAGGAAAGACTGTTTGGCCAAACACCTGAAGCACATGAGGAGGATGTATGGCACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CAA 72 bp TCAAGCCCACCTCTGTCACTTTTTGCAGCGTCGATGTaGGAATTTCCATGTGTGGCATTACTGGCTTCTCTC +
Preference number: 6 (lower is better)
Translates to: SSPPLSLFAASM*EFPCVALLASL
Trigger: GAGAGAAGCCAGTAATGCCACACATGGAAATTCCAACATCGACGCTGCAAAAAGTGACAGAGGTGGGCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CAA 72 bp TCCGTAACTTGGGCTTGCTTTGTGGCATCTCCCTTGTaGACAGATGAAAATCCTGCCCACTCATCTCTCCTT +
Preference number: 6 (lower is better)
Translates to: SVTWACFVASPL*TDENPAHSSLL
Trigger: AAGGAGAGATGAGTGGGCAGGATTTTCATCTGTCAACAAGGGAGATGCCACAAAGCAAGCCCAAGTTACGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CAA 90 bp CATAAGGAAGACAGTCAGGAGCATCAAGCCCACCTCTGTCACTTTTaGCAGCGTCGATGTTGGAATTTCCATGTGTGGCATTACTGGCTT +
Preference number: 6 (lower is better)
Translates to: HKEDSQEHQAHLCHF*QRRCWNFHVWHYWL
Trigger: AAGCCAGTAATGCCACACATGGAAATTCCAACATCGACGCTGCAAAAAGTGACAGAGGTGGGCTTGATGCTCCTGACTGTCTTCCTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CCA 72 bp ATAACTCAGCAGGCTTGCAAATCCAATAGCTATGCTTaGTGCCCAGCATCTGCCTCTCCTGAAAGTATTCAG +
Preference number: 6 (lower is better)
Translates to: ITQQACKSNSYA*CPASASPESIQ
Trigger: CTGAATACTTTCAGGAGAGGCAGATGCTGGGCACCAAGCATAGCTATTGGATTTGCAAGCCTGCTGAGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CCA 72 bp TCATTGAAAGGAAAAACAAGAACAAAGTTGCCTGCTTaGGGATCTGGAGCTTTGCCACGGTCTGACAGGACA +
Preference number: 6 (lower is better)
Translates to: SLKGKTRTKLPA*GSGALPRSDRT
Trigger: TGTCCTGTCAGACCGTGGCAAAGCTCCAGATCCCCAAGCAGGCAACTTTGTTCTTGTTTTTCCTTTCAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CCA 72 bp CACTTTTTGCAGCGTCGATGTTGGAATTTCCATGTGTaGCATTACTGGCTTCTCTCCCCTCATTTCTTAGAC +
Preference number: 6 (lower is better)
Translates to: HFLQRRCWNFHV*HYWLLSPHFLD
Trigger: GTCTAAGAAATGAGGGGAGAGAAGCCAGTAATGCCACACATGGAAATTCCAACATCGACGCTGCAAAAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS TCA 72 bp CTGTTGAACAATCCAAGGTCAAGGCTGGGCTGTAGTTaGCCTCTAAAAGCCATGGTTTCAAGTTGTCATCAA +
Preference number: 6 (lower is better)
Translates to: LLNNPRSRLGCS*PLKAMVSSCHQ
Trigger: TTGATGACAACTTGAAACCATGGCTTTTAGAGGTCAACTACAGCCCAGCCTTGACCTTGGATTGTTCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS TCA 72 bp ATCATGGACAAGTTTTCTCTTCACCAACACATCTGTTaGACAATCCAAGGTCAAGGCTGGGCTGTAGTTGAC +
Preference number: 6 (lower is better)
Translates to: IMDKFSLHQHIC*TIQGQGWAVVD
Trigger: GTCAACTACAGCCCAGCCTTGACCTTGGATTGTTCAACAGATGTGTTGGTGAAGAGAAAACTTGTCCATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1
CDS CAA 90 bp CCCGGATTTATTGATGCTGCTGTTGGTCAAATGGGCATAATTGTTTaGCAAATTACTGAGGTCAAACTTTTCCGTGGCAAACCGAACCAA +
Preference number: 6 (lower is better)
Translates to: PGFIDAAVGQMGIIV*QITEVKLFRGKPNQ
Trigger: TTGGTTCGGTTTGCCACGGAAAAGTTTGACCTCAGTAATTTGCAAAACAATTATGCCCATTTGACCAACAGCAGCATCAATAAATCCGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239587.10
ENST00000515138.1
ENST00000649884.1