RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTLL11 (Homo sapiens)

Ensembl gene IDs: ENSG00000175764

Ensembl transcript IDs: ENST00000321582.10, ENST00000321582.11, ENST00000373776.5, ENST00000373778.5, ENST00000474723.5, ENST00000486362.1, ENST00000487468.5

Found 713 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCAGCCTGGTGAAGCACAGCTCAGCCGCACACAGAGACAGTTCGTaGGGACCTCAGCTGGGCCCCTCGGCAGCCTGCCTGCCATTCCTC +
Preference number: 1 (lower is better)
Translates to: ASLVKHSSAAHRDSS*GPQLGPSAACLPFL
Trigger: GAGGAATGGCAGGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCGGCTGAGCTGTGCTTCACCAGGCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR CCA 90 bp AGCCAGAGAGCCCTCTTGAGGCCGGTCAAGGCTGGAAACGCAGGCTaGGAACTGGCAATGGTTACCTGGAAGCACGTGGGGCCCGGCCTC +
Preference number: 1 (lower is better)
Translates to: SQRALLRPVKAGNAG*ELAMVTWKHVGPGL
Trigger: GAGGCCGGGCCCCACGTGCTTCCAGGTAACCATTGCCAGTTCCCAGCCTGCGTTTCCAGCCTTGACCGGCCTCAAGAGGGCTCTCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487468.5
3UTR TCA 90 bp GCCTGCCATTCCTCTGCAGGCAGAATGCCTGGGGCGCTCCAGCCCTaGAAGCTGCTCTCGTCTTCCGTTTTCCAGGAGGACAGAGTGGCC +
Preference number: 1 (lower is better)
Translates to: ACHSSAGRMPGALQP*KLLSSSVFQEDRVA
Trigger: GGCCACTCTGTCCTCCTGGAAAACGGAAGACGAGAGCAGCTTTCAGGGCTGGAGCGCCCCAGGCATTCTGCCTGCAGAGGAATGGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR CCA 90 bp CTTGTCGATAAGGAGAGGTTTGCAGATGTACTCCTGGACCACCGCTaGCCTGCTCTGGAGGGTCCCTGCCAGGCGGATGTCACTGGGGTC +
Preference number: 1 (lower is better)
Translates to: LVDKERFADVLLDHR*PALEGPCQADVTGV
Trigger: GACCCCAGTGACATCCGCCTGGCAGGGACCCTCCAGAGCAGGCCAGCGGTGGTCCAGGAGTACATCTGCAAACCTCTCCTTATCGACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474723.5
ENST00000487468.5
3UTR CCA 90 bp CTGGAAACGCAGGCTGGGAACTGGCAATGGTTACCTGGAAGCACGTaGGGCCCGGCCTCCCCGTGGGGATGTCTGACTGGTAGAAGACTT +
Preference number: 1 (lower is better)
Translates to: LETQAGNWQWLPGST*GPASPWGCLTGRRL
Trigger: AAGTCTTCTACCAGTCAGACATCCCCACGGGGAGGCCGGGCCCCACGTGCTTCCAGGTAACCATTGCCAGTTCCCAGCCTGCGTTTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487468.5
3UTR TCA 90 bp TCCCTGAGTCCCGCTGGTCCAGGGTCATGGAGTTCCACCTCCGTGTaGTGTCAATGTAGAGGATGTCCACGGCAGCCATGGACAGGCTGC +
Preference number: 1 (lower is better)
Translates to: SLSPAGPGSWSSTSV*CQCRGCPRQPWTGC
Trigger: GCAGCCTGTCCATGGCTGCCGTGGACATCCTCTACATTGACATCACACGGAGGTGGAACTCCATGACCCTGGACCAGCGGGACTCAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR TCA 90 bp ATCCCACCCCGATCACTCATCCTACACGAAGCCAGAGAGCCCTCTTaGGGCCGGTCAAGGCTGGAAACGCAGGCTGGGAACTGGCAATGG +
Preference number: 1 (lower is better)
Translates to: IPPRSLILHEAREPS*GRSRLETQAGNWQW
Trigger: CCATTGCCAGTTCCCAGCCTGCGTTTCCAGCCTTGACCGGCCTCAAGAGGGCTCTCTGGCTTCGTGTAGGATGAGTGATCGGGGTGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487468.5
3UTR GCA 90 bp ATTCCTCTGCAGGCAGAATGCCTGGGGCGCTCCAGCCCTGAAAGCTaGTCTCGTCTTCCGTTTTCCAGGAGGACAGAGTGGCCCTCAGGA +
Preference number: 1 (lower is better)
Translates to: IPLQAECLGRSSPES*SRLPFSRRTEWPSG
Trigger: TCCTGAGGGCCACTCTGTCCTCCTGGAAAACGGAAGACGAGAGCAGCTTTCAGGGCTGGAGCGCCCCAGGCATTCTGCCTGCAGAGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR CCA 90 bp GAGGCAAATGGAAGGCAGGTGGGCTTCGGGGTTGGCGTTGCAGTCTaGAGCACTGGTCAGCTCGCCGTCCAAAGCATCTTCCTTTCCAGC +
Preference number: 1 (lower is better)
Translates to: EANGRQVGFGVGVAV*STGQLAVQSIFLSS
Trigger: GCTGGAAAGGAAGATGCTTTGGACGGCGAGCTGACCAGTGCTCCAGACTGCAACGCCAACCCCGAAGCCCACCTGCCTTCCATTTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR CCA 90 bp AGGAGAGGTTTGCAGATGTACTCCTGGACCACCGCTGGCCTGCTCTaGAGGGTCCCTGCCAGGCGGATGTCACTGGGGTCTTTAATGAGG +
Preference number: 1 (lower is better)
Translates to: RRGLQMYSWTTAGLL*RVPARRMSLGSLMR
Trigger: CCTCATTAAAGACCCCAGTGACATCCGCCTGGCAGGGACCCTCCAGAGCAGGCCAGCGGTGGTCCAGGAGTACATCTGCAAACCTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474723.5
ENST00000487468.5
3UTR CCA 90 bp GCAGGAAATAAACACGATGTTCTCAGGCTTTTCCCGGTGGGCGCGTaGAGGCCCCGGCAGCAGATCCTAACACTCGGCTTCCTCTCCACA +
Preference number: 1 (lower is better)
Translates to: AGNKHDVLRLFPVGA*RPRQQILTLGFLST
Trigger: TGTGGAGAGGAAGCCGAGTGTTAGGATCTGCTGCCGGGGCCTCCACGCGCCCACCGGGAAAAGCCTGAGAACATCGTGTTTATTTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR CCA 90 bp TGGAAGGCAGGTGGGCTTCGGGGTTGGCGTTGCAGTCTGGAGCACTaGTCAGCTCGCCGTCCAAAGCATCTTCCTTTCCAGCGAATGGTT +
Preference number: 1 (lower is better)
Translates to: WKAGGLRGWRCSLEH*SARRPKHLPFQRMV
Trigger: AACCATTCGCTGGAAAGGAAGATGCTTTGGACGGCGAGCTGACCAGTGCTCCAGACTGCAACGCCAACCCCGAAGCCCACCTGCCTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR CCA 90 bp TCAAACTTGAGCTTGTCGATAAGGAGAGGTTTGCAGATGTACTCCTaGACCACCGCTGGCCTGCTCTGGAGGGTCCCTGCCAGGCGGATG +
Preference number: 1 (lower is better)
Translates to: SNLSLSIRRGLQMYS*TTAGLLWRVPARRM
Trigger: CATCCGCCTGGCAGGGACCCTCCAGAGCAGGCCAGCGGTGGTCCAGGAGTACATCTGCAAACCTCTCCTTATCGACAAGCTCAAGTTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474723.5
ENST00000487468.5
3UTR CCA 90 bp TCATCCTACACGAAGCCAGAGAGCCCTCTTGAGGCCGGTCAAGGCTaGAAACGCAGGCTGGGAACTGGCAATGGTTACCTGGAAGCACGT +
Preference number: 1 (lower is better)
Translates to: SSYTKPESPLEAGQG*KRRLGTGNGYLEAR
Trigger: ACGTGCTTCCAGGTAACCATTGCCAGTTCCCAGCCTGCGTTTCCAGCCTTGACCGGCCTCAAGAGGGCTCTCTGGCTTCGTGTAGGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487468.5
3UTR CCA 90 bp AGCCCTGAAAGCTGCTCTCGTCTTCCGTTTTCCAGGAGGACAGAGTaGCCCTCAGGACAGGGTATGTCTGGGATGGGAGAGCTTATTGGC +
Preference number: 1 (lower is better)
Translates to: SPESCSRLPFSRRTE*PSGQGMSGMGELIG
Trigger: GCCAATAAGCTCTCCCATCCCAGACATACCCTGTCCTGAGGGCCACTCTGTCCTCCTGGAAAACGGAAGACGAGAGCAGCTTTCAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR CCA 90 bp GCTGCTGCTGAGTTTGCAGCTCCTTATGAAGGTACGAAAGCCTGTTaGCCCCAACTTCATTGTCCCCTTGATGCCCAGGAACCGGATAAA +
Preference number: 1 (lower is better)
Translates to: AAAEFAAPYEGTKAC*PQLHCPLDAQEPDK
Trigger: TTTATCCGGTTCCTGGGCATCAAGGGGACAATGAAGTTGGGGCCAACAGGCTTTCGTACCTTCATAAGGAGCTGCAAACTCAGCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR TCA 90 bp AAAGGTCAATCAGTGAGGCCACCTGCTCATGAAGTGGCAGCATCTTaGACTTCCTCTGAGCCAGGAAAAAGAAAGCTTCTACGAAGGCCT +
Preference number: 1 (lower is better)
Translates to: KGQSVRPPAHEVAAS*TSSEPGKRKLLRRP
Trigger: AGGCCTTCGTAGAAGCTTTCTTTTTCCTGGCTCAGAGGAAGTTCAAGATGCTGCCACTTCATGAGCAGGTGGCCTCACTGATTGACCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR CCA 90 bp TGGTTTTTCAAGCTGCTGAGACTGATTCTCTCTTTTCTTCTTAAGTaGGTCCATGAGGCGCAGAGTGTCTCTGATCACAGCCACTTTCAC +
Preference number: 1 (lower is better)
Translates to: WFFKLLRLILSFLLK*VHEAQSVSDHSHFH
Trigger: GTGAAAGTGGCTGTGATCAGAGACACTCTGCGCCTCATGGACCCACTTAAGAAGAAAAGAGAGAATCAGTCTCAGCAGCTTGAAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR GCA 90 bp AGGTATTCTTCATTTCATTTTACAGGTAACAGAGGGGAAGTAGCTTaGCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGG +
Preference number: 1 (lower is better)
Translates to: RYSSFHFTGNRGEVA*PKSHREQTESLEVG
Trigger: CCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCCCCTCTGTTACCTGTAAAATGAAATGAAGAATACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
3UTR-3UTR CCA 90 bp TCAGCCGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTTGTCCCCTGCTGGCTaGGCCGAGGGGGAGGGCTCC +
Preference number: 2 (lower is better)
Translates to: SAAHRDSSWGPQLGPSAALSPAG*AEGEGS
Trigger: GGAGCCCTCCCCCTCGGCCCAGCCAGCAGGGGACAA...GGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCGGCTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp GGAAATAAACACGATGTTCTCAGGCTTTTCCCGGTGGGCGCGTGGAGGCCCCGGCGTGGGGACCTCAGCTaGGCCCCTCGGCAGCCTGCC +
Preference number: 2 (lower is better)
Translates to: GNKHDVLRLFPVGAWRPRRGDLS*APRQPA
Trigger: GGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACG...CCGGGGCCTCCACGCGCCCACCGGGAAAAGCCTGAGAACATCGTGTTTATTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp CACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTGCCTGCCAGGTGGGCTTCGGGGTTaGCGTTGCAGTCTGGAGCAC +
Preference number: 2 (lower is better)
Translates to: HRDSSWGPQLGPSAACLPGGLRG*RCSLEH
Trigger: GTGCTCCAGACTGCAACGCCAACCCCGAAGCCCACC...TGGCAGGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR TCA 90 bp TCAGCCGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCGGCTCCTGCCAGCTCTaGGGCTCCAGGAGTCTTAGT +
Preference number: 2 (lower is better)
Translates to: SAAHRDSSWGPQLGPSAAGSCQL*GSRSLS
Trigger: ACTAAGACTCCTGGAGCCTCAGAGCTGGCAGGAGCC...GGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCGGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.10
3UTR-3UTR CCA 90 bp CAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTGCCTGCCATTCCTCTGTGCAGGCAGAATGCCTaGGGCGCTCCAGCCCTGAAA +
Preference number: 2 (lower is better)
Translates to: QFVGTSAGPLGSLPAIPLCRQNA*GAPALK
Trigger: TTTCAGGGCTGGAGCGCCCCAGGCATTCTGCCTGCA...CAGAGGAATGGCAGGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp TCAGCCGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCGTTGGCGTTGCAGTCTaGAGCACTGGTCAGCTCGCC +
Preference number: 2 (lower is better)
Translates to: SAAHRDSSWGPQLGPSAAVGVAV*STGQLA
Trigger: GGCGAGCTGACCAGTGCTCCAGACTGCAACGCCAAC...GGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCGGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp AGCCAGAGAGCCCTCTTGAGGCCGGTCAAGGCTGGAAACGCAGGCTGGGAACTGCTCCTGGACCACCGCTaGCCTGCTCTGGAGGGTCCC +
Preference number: 2 (lower is better)
Translates to: SQRALLRPVKAGNAGWELLLDHR*PALEGP
Trigger: GGGACCCTCCAGAGCAGGCCAGCGGTGGTCCAGGAG...CAGTTCCCAGCCTGCGTTTCCAGCCTTGACCGGCCTCAAGAGGGCTCTCTGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487468.5
3UTR-3UTR TCA 90 bp GAAATAAACACGATGTTCTCAGGCTTTTCCCGGTGGGCGCGTGGAGGCCCCGGCGGGGCGCTCCAGCCCTaGAAGCTGCTCTCGTCTTCC +
Preference number: 2 (lower is better)
Translates to: EINTMFSGFSRWARGGPGGALQP*KLLSSS
Trigger: GGAAGACGAGAGCAGCTTTCAGGGCTGGAGCGCCCC...GCCGGGGCCTCCACGCGCCCACCGGGAAAAGCCTGAGAACATCGTGTTTATTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR TCA 90 bp GGAAATAAACACGATGTTCTCAGGCTTTTCCCGGTGGGCGCGTGGAGGCCCCGGGGGGCGCTCCAGCCCTaGAAGCTGCTCTCGTCTTCC +
Preference number: 2 (lower is better)
Translates to: GNKHDVLRLFPVGAWRPRGALQP*KLLSSS
Trigger: GGAAGACGAGAGCAGCTTTCAGGGCTGGAGCGCCCC...CCGGGGCCTCCACGCGCCCACCGGGAAAAGCCTGAGAACATCGTGTTTATTTCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR TCA 90 bp CACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTGCCTGCCACACCCATGTAGCACATaGCTGGGATGGGAGATTCGC +
Preference number: 2 (lower is better)
Translates to: HRDSSWGPQLGPSAACLPHPCST*LGWEIR
Trigger: GCGAATCTCCCATCCCAGTCATGTGCTACATGGGTG...TGGCAGGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR TCA 90 bp TCAGCCGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCCACCCATGTAGCACATaGCTGGGATGGGAGATTCGC +
Preference number: 2 (lower is better)
Translates to: SAAHRDSSWGPQLGPSAAHPCST*LGWEIR
Trigger: GCGAATCTCCCATCCCAGTCATGTGCTACATGGGTG...GGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR GCA 90 bp ATTCCTCTGCAGGCAGAATGCCTGGGGCGCTCCAGCCCTGAAAGCTGCTCTCGTCCTCTGCAGGCAGAATaGCTGGGGCGCTCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: IPLQAECLGRSSPESCSRPLQAE*LGRSSP
Trigger: AGGGCTGGAGCGCCCCAGGCATTCTGCCTGCAGAGG...ACGAGAGCAGCTTTCAGGGCTGGAGCGCCCCAGGCATTCTGCCTGCAGAGGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp GCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTGCCTGTCAAAGCCTAAAATCTaGAAGCACGTGGGGCCCGGC +
Preference number: 2 (lower is better)
Translates to: AHRDSSWGPQLGPSAACLSKPKI*KHVGPG
Trigger: GCCGGGCCCCACGTGCTTCCAGATTTTAGGCTTTGA...CAGGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR GCA 90 bp GGTGAAGCACAGCTCAGCCGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGTGCCTGCCATTCCTCTaGAGGCAGAATGCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: GEAQLSRTQRQFVGTSAGCLPFL*RQNAWG
Trigger: GCCCCAGGCATTCTGCCTGCAGAGGAATGGCAGGCA...CCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCGGCTGAGCTGTGCTTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp AGTCTGGAGCACTGGTCAGCTCGCCGTCCAAAGCATCTTCCTTTCCAGCGAATGTTCCCGGTGGGCGCGTaGAGGCCCCGGCAGCAGATC +
Preference number: 2 (lower is better)
Translates to: SLEHWSARRPKHLPFQRMFPVGA*RPRQQI
Trigger: GATCTGCTGCCGGGGCCTCCACGCGCCCACCGGGAA...CATTCGCTGGAAAGGAAGATGCTTTGGACGGCGAGCTGACCAGTGCTCCAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp GTCCTGTGCCCCAAATACAACAGATTTGCCCCAGTTGGTGCTTCCTGTGAGCCCTTCCCGGTGGGCGCGTaGAGGCCCCGGCAGCAGATC +
Preference number: 2 (lower is better)
Translates to: VLCPKYNRFAPVGASCEPFPVGA*RPRQQI
Trigger: GATCTGCTGCCGGGGCCTCCACGCGCCCACCGGGAA...GGGCTCACAGGAAGCACCAACTGGGGCAAATCTGTTGTATTTGGGGCACAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp CACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTGCCTGCCATCCAGCAGGGACAGGTaGTACTCGCAAAGGTCAATC +
Preference number: 2 (lower is better)
Translates to: HRDSSWGPQLGPSAACLPSSRDR*YSQRSI
Trigger: GATTGACCTTTGCGAGTACCACCTGTCCCTGCTGGA...TGGCAGGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR TCA 90 bp CGGGACGCCCCGGCCACACACCAGGCGTTTTTCATCCAGCAGGGACAGGTGGTACACCCATGTAGCACATaGCTGGGATGGGAGATTCGC +
Preference number: 2 (lower is better)
Translates to: RDAPATHQAFFIQQGQVVHPCST*LGWEIR
Trigger: GCGAATCTCCCATCCCAGTCATGTGCTACATGGGTG...TACCACCTGTCCCTGCTGGATGAAAAACGCCTGGTGTGTGGCCGGGGCGTCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR GCA 90 bp GATCCTAACACTCGGCTTCCTCTCCACAGCTCCGGGCCTTGGGATCGATTGTGTCCTCTGCAGGCAGAATaGCTGGGGCGCTCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: DPNTRLPLHSSGPWDRLCPLQAE*LGRSSP
Trigger: AGGGCTGGAGCGCCCCAGGCATTCTGCCTGCAGAGG...ACACAATCGATCCCAAGGCCCGGAGCTGTGGAGAGGAAGCCGAGTGTTAGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR GCA 90 bp GCCCCGGCCACACACCAGGCGTTTTTCATCCAGCAGGGACAGGTGGTACTCGCACTTCGGGGTTGGCGTTaGAGTCTGGAGCACTGGTCA +
Preference number: 2 (lower is better)
Translates to: APATHQAFFIQQGQVVLALRGWR*SLEHWS
Trigger: TGACCAGTGCTCCAGACTGCAACGCCAACCCCGAAG...TGCGAGTACCACCTGTCCCTGCTGGATGAAAAACGCCTGGTGTGTGGCCGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp CGGGACGCCCCGGCCACACACCAGGCGTTTTTCATCCAGCAGGGACAGGTGGTACTAGCACTGTCCGAGTaGATGAAGTTGCCGCTGTGG +
Preference number: 2 (lower is better)
Translates to: RDAPATHQAFFIQQGQVVLALSE*MKLPLW
Trigger: CCACAGCGGCAACTTCATCCACTCGGACAGTGCTAG...TACCACCTGTCCCTGCTGGATGAAAAACGCCTGGTGTGTGGCCGGGGCGTCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR CAA 90 bp ACCTGCTTGAGGCAAATGGAAGGCAGGTGGGCTTCGGGGTTGGCGTaGCAGTCTGGAGCACTGGTCAGCTCGCCGTCCAAAGCATCTTCC +
Preference number: 2 (lower is better)
Translates to: TCLRQMEGRWASGLA*QSGALVSSPSKASS
Trigger: GGAAGATGCTTTGGACGGCGAGCTGACCAGTGCTCCAGACTGCAACGCCAACCCCGAAGCCCACCTGCCTTCCATTTGCCTCAAGCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR CAA 90 bp CATCCCACCCCGATCACTCATCCTACACGAAGCCAGAGAGCCCTCTaGAGGCCGGTCAAGGCTGGAAACGCAGGCTGGGAACTGGCAATG +
Preference number: 2 (lower is better)
Translates to: HPTPITHPTRSQRAL*RPVKAGNAGWELAM
Trigger: CATTGCCAGTTCCCAGCCTGCGTTTCCAGCCTTGACCGGCCTCAAGAGGGCTCTCTGGCTTCGTGTAGGATGAGTGATCGGGGTGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487468.5
3UTR-3UTR TCA 90 bp CCGGCAGCAGATCCTAACACTCGGCTTCCTCTCCACAGCTCCGGGCCTTGGGATCACTGTCCGAGTGGATaGAGTTGCCGCTGTGGATGT +
Preference number: 2 (lower is better)
Translates to: PAADPNTRLPLHSSGPWDHCPSG*SCRCGC
Trigger: ACATCCACAGCGGCAACTTCATCCACTCGGACAGTG...ATCCCAAGGCCCGGAGCTGTGGAGAGGAAGCCGAGTGTTAGGATCTGCTGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR TCA 90 bp CCAGAGAGCCCTCTTGAGGCCGGTCAAGGCTGGAAACGCAGGCTGGGAACTGGCACTGGTAGAAGACTTTaGGCTCTGGAGTCAGCGCGA +
Preference number: 2 (lower is better)
Translates to: PESPLEAGQGWKRRLGTGTGRRL*ALESAR
Trigger: TCGCGCTGACTCCAGAGCTCAAAGTCTTCTACCAGT...GCCAGTTCCCAGCCTGCGTTTCCAGCCTTGACCGGCCTCAAGAGGGCTCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487468.5
3UTR-3UTR TCA 90 bp CTCAGCCGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCAGTTCCACCTCCGTGTaGTGTCAATGTAGAGGATGT +
Preference number: 2 (lower is better)
Translates to: LSRTQRQFVGTSAGPLGSSSTSV*CQCRGC
Trigger: ACATCCTCTACATTGACATCACACGGAGGTGGAACT...GCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCGGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR GCA 90 bp AAGCACAGCTCAGCCGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCCAGCCCTGAAAGCTaGTCTCGTCTTCCGTTTTCC +
Preference number: 2 (lower is better)
Translates to: KHSSAAHRDSSWGPQLGPSSPES*SRLPFS
Trigger: GGAAAACGGAAGACGAGAGCAGCTTTCAGGGCTGGA...GGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCGGCTGAGCTGTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR GCA 90 bp GCCCCGGCCACACACCAGGCGTTTTTCATCCAGCAGGGACAGGTGGTACTCGCAGCTTCTACGAAGGCCTaGAGACACATCCCTGAGTCC +
Preference number: 2 (lower is better)
Translates to: APATHQAFFIQQGQVVLAASTKA*RHIPES
Trigger: GGACTCAGGGATGTGTCTGCAGGCCTTCGTAGAAGC...TGCGAGTACCACCTGTCCCTGCTGGATGAAAAACGCCTGGTGTGTGGCCGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp CAGGAAATAAACACGATGTTCTCAGGCTTTTCCCGGTGGGCGCGTGGAGGCCCCTGCAGGCAGAATGCCTaGGGCGCTCCAGCCCTGAAA +
Preference number: 2 (lower is better)
Translates to: QEINTMFSGFSRWARGGPCRQNA*GAPALK
Trigger: TTTCAGGGCTGGAGCGCCCCAGGCATTCTGCCTGCA...GGGGCCTCCACGCGCCCACCGGGAAAAGCCTGAGAACATCGTGTTTATTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp AGAGTGGCCCTCAGGACAGGGTATGTCTGGGATGGGAGAGCTTATTGGCACAGCCACAGAGACAGTTCGTaGGGACCTCAGCTGGGCCCC +
Preference number: 2 (lower is better)
Translates to: RVALRTGYVWDGRAYWHSHRDSS*GPQLGP
Trigger: GGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTG...GCTGTGCCAATAAGCTCTCCCATCCCAGACATACCCTGTCCTGAGGGCCACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp GGGCTTCGGGGTTGGCGTTGCAGTCTGGAGCACTGGTCAGCTCGCCGTCCAAAGGAAGACTTTGAGCTCTaGAGTCAGCGCGATGACCGT +
Preference number: 2 (lower is better)
Translates to: GLRGWRCSLEHWSARRPKEDFEL*SQRDDR
Trigger: ACGGTCATCGCGCTGACTCCAGAGCTCAAAGTCTTC...CTTTGGACGGCGAGCTGACCAGTGCTCCAGACTGCAACGCCAACCCCGAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp GCTGCTGCTGAGTTTGCAGCTCCTTATGAAGGTACGAAAGCCTGTTGGCCCCAACTCCTGGACCACCGCTaGCCTGCTCTGGAGGGTCCC +
Preference number: 2 (lower is better)
Translates to: AAAEFAAPYEGTKACWPQLLDHR*PALEGP
Trigger: GGGACCCTCCAGAGCAGGCCAGCGGTGGTCCAGGAG...TTGGGGCCAACAGGCTTTCGTACCTTCATAAGGAGCTGCAAACTCAGCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474723.5
3UTR-3UTR TCA 90 bp CAGTCTGGAGCACTGGTCAGCTCGCCGTCCAAAGCATCTTCCTTTCCAGCGAATAACCAGCCAGCCTGGTaGAGCACAGCTCAGCCGCAC +
Preference number: 2 (lower is better)
Translates to: QSGALVSSPSKASSFPANNQPAW*STAQPH
Trigger: GTGCGGCTGAGCTGTGCTTCACCAGGCTGGCTGGTT...ATTCGCTGGAAAGGAAGATGCTTTGGACGGCGAGCTGACCAGTGCTCCAGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR GCA 90 bp GTAGAAGACTTTGAGCTCTGGAGTCAGCGCGATGACCGTCTTAATCACCACGGAGGACCACCGCTGGCCTaGTCTGGAGGGTCCCTGCCA +
Preference number: 2 (lower is better)
Translates to: VEDFELWSQRDDRLNHHGGPPLA*SGGSLP
Trigger: TGGCAGGGACCCTCCAGAGCAGGCCAGCGGTGGTCC...TCCGTGGTGATTAAGACGGTCATCGCGCTGACTCCAGAGCTCAAAGTCTTCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474723.5
ENST00000487468.5
3UTR-3UTR CCA 90 bp AGAGTGGCCCTCAGGACAGGGTATGTCTGGGATGGGAGAGCTTATTGGCACAGCTGCAGGCAGAATGCCTaGGGCGCTCCAGCCCTGAAA +
Preference number: 2 (lower is better)
Translates to: RVALRTGYVWDGRAYWHSCRQNA*GAPALK
Trigger: TTTCAGGGCTGGAGCGCCCCAGGCATTCTGCCTGCA...GCTGTGCCAATAAGCTCTCCCATCCCAGACATACCCTGTCCTGAGGGCCACTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp ATCACCACGGAGATGATGTCAGACCAGACCTTCTTGATGTCAACGCCTTTGGAACGTGGGGACCTCAGCTaGGCCCCTCGGCAGCCTGCC +
Preference number: 2 (lower is better)
Translates to: ITTEMMSDQTFLMSTPLERGDLS*APRQPA
Trigger: GGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACG...TTCCAAAGGCGTTGACATCAAGAAGGTCTGGTCTGACATCATCTCCGTGGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp AGTCTGGAGCACTGGTCAGCTCGCCGTCCAAAGCATCTTCCTTTCCAGCGAATGCACAGAGACAGTTCGTaGGGACCTCAGCTGGGCCCC +
Preference number: 2 (lower is better)
Translates to: SLEHWSARRPKHLPFQRMHRDSS*GPQLGP
Trigger: GGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTG...CATTCGCTGGAAAGGAAGATGCTTTGGACGGCGAGCTGACCAGTGCTCCAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp GCCCCGGCCACACACCAGGCGTTTTTCATCCAGCAGGGACAGGTGGTACTCGCAGGTACGAAAGCCTGTTaGCCCCAACTTCATTGTCCC +
Preference number: 2 (lower is better)
Translates to: APATHQAFFIQQGQVVLAGTKAC*PQLHCP
Trigger: GGGACAATGAAGTTGGGGCCAACAGGCTTTCGTACC...TGCGAGTACCACCTGTCCCTGCTGGATGAAAAACGCCTGGTGTGTGGCCGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp AAGCTGCTCTCGTCTTCCGTTTTCCAGGAGGACAGAGTGGCCCTCAGGACAGGGATCCCTGAGTCCCGCTaGTCCAGGGTCATGGAGTTC +
Preference number: 2 (lower is better)
Translates to: KLLSSSVFQEDRVALRTGIPESR*SRVMEF
Trigger: GAACTCCATGACCCTGGACCAGCGGGACTCAGGGAT...CCCTGTCCTGAGGGCCACTCTGTCCTCCTGGAAAACGGAAGACGAGAGCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR GCA 90 bp CGGGCCTTGGGATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGCCCCAGTGCCTGCCATTCCTCTaGAGGCAGAATGCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: RALGSIVSCAPNTTDLPQCLPFL*RQNAWG
Trigger: GCCCCAGGCATTCTGCCTGCAGAGGAATGGCAGGCA...CTGGGGCAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCCCAAGGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR GCA 90 bp GAGGACAGAGTGGCCCTCAGGACAGGGTATGTCTGGGATGGGAGAGCTTATTGGCTTCGGGGTTGGCGTTaGAGTCTGGAGCACTGGTCA +
Preference number: 2 (lower is better)
Translates to: EDRVALRTGYVWDGRAYWLRGWR*SLEHWS
Trigger: TGACCAGTGCTCCAGACTGCAACGCCAACCCCGAAG...CCAATAAGCTCTCCCATCCCAGACATACCCTGTCCTGAGGGCCACTCTGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR GCA 90 bp CTGGGATGGGAGATTCGCAGATGCCTACTTGATATTTCCACTTCCTTCTCTCGGGGACCACCGCTGGCCTaGTCTGGAGGGTCCCTGCCA +
Preference number: 2 (lower is better)
Translates to: LGWEIRRCLLDISTSFSRGPPLA*SGGSLP
Trigger: TGGCAGGGACCCTCCAGAGCAGGCCAGCGGTGGTCC...CCGAGAGAAGGAAGTGGAAATATCAAGTAGGCATCTGCGAATCTCCCATCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474723.5
3UTR-3UTR CCA 90 bp AGTTTGCAGCTCCTTATGAAGGTACGAAAGCCTGTTGGCCCCAACTTCATTGTCTCAGGCTTTTCCCGGTaGGCGCGTGGAGGCCCCGGC +
Preference number: 2 (lower is better)
Translates to: SLQLLMKVRKPVGPNFIVSGFSR*ARGGPG
Trigger: GCCGGGGCCTCCACGCGCCCACCGGGAAAAGCCTGA...GACAATGAAGTTGGGGCCAACAGGCTTTCGTACCTTCATAAGGAGCTGCAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp ATTTGCCATCCTGTCCACCAGGCGCAGGTAGTTGAACTGTTTTGCGTACTTGGGGGCCCGGCCTCCCCGTaGGGATGTCTGACTGGTAGA +
Preference number: 2 (lower is better)
Translates to: ICHPVHQAQVVELFCVLGGPASP*GCLTGR
Trigger: TCTACCAGTCAGACATCCCCACGGGGAGGCCGGGCC...CCCAAGTACGCAAAACAGTTCAACTACCTGCGCCTGGTGGACAGGATGGCAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp CTGCTGAGTTTGCAGCTCCTTATGAAGGTACGAAAGCCTGTTGGCCCCAACTTCAAATCTGGAAGCACGTaGGGCCCGGCCTCCCCGTGG +
Preference number: 2 (lower is better)
Translates to: LLSLQLLMKVRKPVGPNFKSGST*GPASPW
Trigger: CCACGGGGAGGCCGGGCCCCACGTGCTTCCAGATTT...GAAGTTGGGGCCAACAGGCTTTCGTACCTTCATAAGGAGCTGCAAACTCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp GTCCTGTGCCCCAAATACAACAGATTTGCCCCAGTTGGTGCTTCCTGTGAGCCCGTTGGCGTTGCAGTCTaGAGCACTGGTCAGCTCGCC +
Preference number: 2 (lower is better)
Translates to: VLCPKYNRFAPVGASCEPVGVAV*STGQLA
Trigger: GGCGAGCTGACCAGTGCTCCAGACTGCAACGCCAAC...GGGCTCACAGGAAGCACCAACTGGGGCAAATCTGTTGTATTTGGGGCACAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR CAA 90 bp CCTAACACTCGGCTTCCTCTCCACAGCTCCGGGCCTTGGGATCGATaGTGTCCTGTGCCCCAAATACAACAGATTTGCCCCAGTTGGTGC +
Preference number: 2 (lower is better)
Translates to: PNTRLPLHSSGPWDR*CPVPQIQQICPSWC
Trigger: GCACCAACTGGGGCAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCCCAAGGCCCGGAGCTGTGGAGAGGAAGCCGAGTGTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp GCCCCGGCCACACACCAGGCGTTTTTCATCCAGCAGGGACAGGTGGTACTCGCACATGTAGCACATGACTaGGATGGGAGATTCGCAGAT +
Preference number: 2 (lower is better)
Translates to: APATHQAFFIQQGQVVLAHVAHD*DGRFAD
Trigger: ATCTGCGAATCTCCCATCCCAGTCATGTGCTACATG...TGCGAGTACCACCTGTCCCTGCTGGATGAAAAACGCCTGGTGTGTGGCCGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp GTCGATAAGGAGAGGTTTGCAGATGTACTCCTGGACCACCGCTGGCCTGCTCTGTGCGGTGCAGGTTTTTaGGGGTGGGCTCCTGATATG +
Preference number: 2 (lower is better)
Translates to: VDKERFADVLLDHRWPALCGAGF*GWAPDM
Trigger: CATATCAGGAGCCCACCCCCAAAAACCTGCACCGCA...CAGAGCAGGCCAGCGGTGGTCCAGGAGTACATCTGCAAACCTCTCCTTATCGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474723.5
ENST00000487468.5
3UTR-3UTR CCA 90 bp GAGCACTGGTCAGCTCGCCGTCCAAAGCATCTTCCTTTCCAGCGAATGGTTTTTGGTGGGCTTCGGGGTTaGCGTTGCAGTCTGGAGCAC +
Preference number: 2 (lower is better)
Translates to: EHWSARRPKHLPFQRMVFGGLRG*RCSLEH
Trigger: GTGCTCCAGACTGCAACGCCAACCCCGAAGCCCACC...AAAAACCATTCGCTGGAAAGGAAGATGCTTTGGACGGCGAGCTGACCAGTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp CACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACACCCAAGCACTGTCCCCTCCTCTaGCCATCCCACCCCGATCAC +
Preference number: 2 (lower is better)
Translates to: HTGSKQKAWKLGPGLTPKHCPLL*PSHPDH
Trigger: GTGATCGGGGTGGGATGGCCAGAGGAGGGGACAGTG...CTTGGGTGTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
3UTR-3UTR CCA 90 bp GGTAACAGAGGGGAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCCACTGTCCCCTCCTCTaGCCATCCCACCCCGATCAC +
Preference number: 2 (lower is better)
Translates to: GNRGEVACPKSHREQTESHCPLL*PSHPDH
Trigger: GTGATCGGGGTGGGATGGCCAGAGGAGGGGACAGTG...GCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCCCCTCTGTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
3UTR CAA 90 bp GGGGAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTaGGAAGTTGGGCCCAGGTTTAACACCCAAGCCCACAGCACCACC +
Preference number: 2 (lower is better)
Translates to: GEVACPKSHREQTES*EVGPRFNTQAHSTT
Trigger: GGTGGTGCTGTGGGCTTGGGTGTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
3UTR-3UTR TCA 90 bp GATCCTAACACTCGGCTTCCTCTCCACAGCTCCGGGCCTTGGGATCGATTGTGTAGTTGGTGCTTCCTGTaGGCCCAGAATAGAAGGTGC +
Preference number: 2 (lower is better)
Translates to: DPNTRLPLHSSGPWDRLCSWCFL*AQNRRC
Trigger: GCACCTTCTATTCTGGGCTCACAGGAAGCACCAACT...ACACAATCGATCCCAAGGCCCGGAGCTGTGGAGAGGAAGCCGAGTGTTAGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR TCA 90 bp AAGCACAGCTCAGCCGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCATCTTGAACTTCCTCTaGGCCAGGAAAAAGAAAGCT +
Preference number: 2 (lower is better)
Translates to: KHSSAAHRDSSWGPQLGPILNFL*ARKKKA
Trigger: AGCTTTCTTTTTCCTGGCTCAGAGGAAGTTCAAGAT...GGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCGGCTGAGCTGTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp GGTACTCGCAAAGGTCAATCAGTGAGGCCACCTGCTCATGAAGTGGCAGCATCTCAAATGGAAGGCAGGTaGGCTTCGGGGTTGGCGTTG +
Preference number: 2 (lower is better)
Translates to: GTRKGQSVRPPAHEVAASQMEGR*ASGLAL
Trigger: CAACGCCAACCCCGAAGCCCACCTGCCTTCCATTTG...AGATGCTGCCACTTCATGAGCAGGTGGCCTCACTGATTGACCTTTGCGAGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp GTGTCCTGTGCCCCAAATACAACAGATTTGCCCCAGTTGGTGCTTCCTGTGAGCGATGGGAGAGCTTATTaGCACAGCTGGTGCGGGGTG +
Preference number: 2 (lower is better)
Translates to: VSCAPNTTDLPQLVLPVSDGRAY*HSWCGV
Trigger: CACCCCGCACCAGCTGTGCCAATAAGCTCTCCCATC...GCTCACAGGAAGCACCAACTGGGGCAAATCTGTTGTATTTGGGGCACAGGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp TCAACGCCTTTGGAAGACAGTCTACAAAGGATGCTGGAAAAAGTCCTTTTGCTGACCGCTGGCCTGCTCTaGAGGGTCCCTGCCAGGCGG +
Preference number: 2 (lower is better)
Translates to: STPLEDSLQRMLEKVLLLTAGLL*RVPARR
Trigger: CCGCCTGGCAGGGACCCTCCAGAGCAGGCCAGCGGT...CAGCAAAAGGACTTTTTCCAGCATCCTTTGTAGACTGTCTTCCAAAGGCGTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474723.5
ENST00000487468.5
3UTR-3UTR CCA 90 bp CAGCTCCGGGCCTTGGGATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGTTGCAGATGTACTCCTaGACCACCGCTGGCCTGCTC +
Preference number: 2 (lower is better)
Translates to: QLRALGSIVSCAPNTTDLLQMYS*TTAGLL
Trigger: GAGCAGGCCAGCGGTGGTCCAGGAGTACATCTGCAA...CAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCCCAAGGCCCGGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474723.5
3UTR-3UTR TCA 90 bp CAGTCTGGAGCACTGGTCAGCTCGCCGTCCAAAGCATCTTCCTTTCCAGCGAATACTGGTAGAAGACTTTaGGCTCTGGAGTCAGCGCGA +
Preference number: 2 (lower is better)
Translates to: QSGALVSSPSKASSFPANTGRRL*ALESAR
Trigger: TCGCGCTGACTCCAGAGCTCAAAGTCTTCTACCAGT...ATTCGCTGGAAAGGAAGATGCTTTGGACGGCGAGCTGACCAGTGCTCCAGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR GCA 90 bp GGATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGCCCCAGTTGGTGCTTTGCCTGCCATTCCTCTaGAGGCAGAATGCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: GSIVSCAPNTTDLPQLVLCLPFL*RQNAWG
Trigger: GCCCCAGGCATTCTGCCTGCAGAGGAATGGCAGGCA...AAGCACCAACTGGGGCAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp TACACCCATGTAGCACATGACTGGGATGGGAGATTCGCAGATGCCTACTTGATACACAGAGACAGTTCGTaGGGACCTCAGCTGGGCCCC +
Preference number: 2 (lower is better)
Translates to: YTHVAHDWDGRFADAYLIHRDSS*GPQLGP
Trigger: GGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTG...TATCAAGTAGGCATCTGCGAATCTCCCATCCCAGTCATGTGCTACATGGGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp GAGCACTGGTCAGCTCGCCGTCCAAAGCATCTTCCTTTCCAGCGAATGGTTTTTCACAGCTCCGGGCCTTaGGATCGATTGTGTCCTGTG +
Preference number: 2 (lower is better)
Translates to: EHWSARRPKHLPFQRMVFHSSGP*DRLCPV
Trigger: CACAGGACACAATCGATCCCAAGGCCCGGAGCTGTG...AAAAACCATTCGCTGGAAAGGAAGATGCTTTGGACGGCGAGCTGACCAGTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp GCAGATGCCTACTTGATATTTCCACTTCCTTCTCTCGGAACGGGCGGCAGGAAAGCAGGTTTTTGGGGGTaGGCTCCTGATATGGCTCGG +
Preference number: 2 (lower is better)
Translates to: ADAYLIFPLPSLGTGGRKAGFWG*APDMAR
Trigger: CCGAGCCATATCAGGAGCCCACCCCCAAAAACCTGC...TTTCCTGCCGCCCGTTCCGAGAGAAGGAAGTGGAAATATCAAGTAGGCATCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp ACTTTGAGCTCTGGAGTCAGCGCGATGACCGTCTTAATCACCACGGAGATGATGGCAGGTTTTTGGGGGTaGGCTCCTGATATGGCTCGG +
Preference number: 2 (lower is better)
Translates to: TLSSGVSAMTVLITTEMMAGFWG*APDMAR
Trigger: CCGAGCCATATCAGGAGCCCACCCCCAAAAACCTGC...CATCATCTCCGTGGTGATTAAGACGGTCATCGCGCTGACTCCAGAGCTCAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373778.5
ENST00000474723.5
ENST00000487468.5
3UTR-3UTR CCA 90 bp GAGCACTGGTCAGCTCGCCGTCCAAAGCATCTTCCTTTCCAGCGAATGGTTTTTCAAATGGAAGGCAGGTaGGCTTCGGGGTTGGCGTTG +
Preference number: 2 (lower is better)
Translates to: EHWSARRPKHLPFQRMVFQMEGR*ASGLAL
Trigger: CAACGCCAACCCCGAAGCCCACCTGCCTTCCATTTG...AAAAACCATTCGCTGGAAAGGAAGATGCTTTGGACGGCGAGCTGACCAGTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp CTGATATGGCTCGGTACAAAACCTAGAGAGTCCGTCTTTGGCTATATAAATCTCACCGCTGGCCTGCTCTaGAGGGTCCCTGCCAGGCGG +
Preference number: 2 (lower is better)
Translates to: LIWLGTKPRESVFGYINLTAGLL*RVPARR
Trigger: CCGCCTGGCAGGGACCCTCCAGAGCAGGCCAGCGGT...GAGATTTATATAGCCAAAGACGGACTCTCTAGGTTTTGTACCGAGCCATATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474723.5
ENST00000487468.5
3UTR-3UTR TCA 90 bp AGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCACTGTCCGAGTGGATaGAGTTGCCGCTGTGGATGT +
Preference number: 2 (lower is better)
Translates to: SSLPQITQGANRKLGSWAHCPSG*SCRCGC
Trigger: ACATCCACAGCGGCAACTTCATCCACTCGGACAGTG...GGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487468.5
3UTR-3UTR TCA 90 bp CAGCTCCGGGCCTTGGGATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGACTGGTAGAAGACTTTaGGCTCTGGAGTCAGCGCGA +
Preference number: 2 (lower is better)
Translates to: QLRALGSIVSCAPNTTDLTGRRL*ALESAR
Trigger: TCGCGCTGACTCCAGAGCTCAAAGTCTTCTACCAGT...CAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCCCAAGGCCCGGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR GCA 90 bp GCTGCTGCTGAGTTTGCAGCTCCTTATGAAGGTACGAAAGCCTGTTGGCCCCAATCCAGCCCTGAAAGCTaGTCTCGTCTTCCGTTTTCC +
Preference number: 2 (lower is better)
Translates to: AAAEFAAPYEGTKACWPQSSPES*SRLPFS
Trigger: GGAAAACGGAAGACGAGAGCAGCTTTCAGGGCTGGA...TTGGGGCCAACAGGCTTTCGTACCTTCATAAGGAGCTGCAAACTCAGCAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR GCA 90 bp GGGCGCTCCAGCCCTGAAAGCTGCTCTCGTCTTCCGTTTTCCAGGAGGACAGAGTGGGAGATTCGCAGATaGCTACTTGATATTTCCACT +
Preference number: 2 (lower is better)
Translates to: GRSSPESCSRLPFSRRTEWEIRR*LLDIST
Trigger: AGTGGAAATATCAAGTAGGCATCTGCGAATCTCCCA...CTCTGTCCTCCTGGAAAACGGAAGACGAGAGCAGCTTTCAGGGCTGGAGCGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR GCA 90 bp CAGTCTGGAGCACTGGTCAGCTCGCCGTCCAAAGCATCTTCCTTTCCAGCGAATTACTTGGGGAACACCTaGTTGAGGCAAATGGAAGGC +
Preference number: 2 (lower is better)
Translates to: QSGALVSSPSKASSFPANYLGNT*LRQMEG
Trigger: GCCTTCCATTTGCCTCAAGCAGGTGTTCCCCAAGTA...ATTCGCTGGAAAGGAAGATGCTTTGGACGGCGAGCTGACCAGTGCTCCAGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp CAGTCTGGAGCACTGGTCAGCTCGCCGTCCAAAGCATCTTCCTTTCCAGCGAATGGTGGGCTCCTGATATaGCTCGGTACAAAACCTAGA +
Preference number: 2 (lower is better)
Translates to: QSGALVSSPSKASSFPANGGLLI*LGTKPR
Trigger: TCTAGGTTTTGTACCGAGCCATATCAGGAGCCCACC...ATTCGCTGGAAAGGAAGATGCTTTGGACGGCGAGCTGACCAGTGCTCCAGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp GAGCACTGGTCAGCTCGCCGTCCAAAGCATCTTCCTTTCCAGCGAATGGTTTTTTGCGGTGCAGGTTTTTaGGGGTGGGCTCCTGATATG +
Preference number: 2 (lower is better)
Translates to: EHWSARRPKHLPFQRMVFCGAGF*GWAPDM
Trigger: CATATCAGGAGCCCACCCCCAAAAACCTGCACCGCA...AAAAACCATTCGCTGGAAAGGAAGATGCTTTGGACGGCGAGCTGACCAGTGCTC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp GCAGATGCCTACTTGATATTTCCACTTCCTTCTCTCGGAACGGGCGGCAGGAAACTAGCACTGTCCGAGTaGATGAAGTTGCCGCTGTGG +
Preference number: 2 (lower is better)
Translates to: ADAYLIFPLPSLGTGGRKLALSE*MKLPLW
Trigger: CCACAGCGGCAACTTCATCCACTCGGACAGTGCTAG...TTTCCTGCCGCCCGTTCCGAGAGAAGGAAGTGGAAATATCAAGTAGGCATCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR TCA 90 bp CTGATATGGCTCGGTACAAAACCTAGAGAGTCCGTCTTTGGCTATATAAATCTCGGGGCGCTCCAGCCCTaGAAGCTGCTCTCGTCTTCC +
Preference number: 2 (lower is better)
Translates to: LIWLGTKPRESVFGYINLGALQP*KLLSSS
Trigger: GGAAGACGAGAGCAGCTTTCAGGGCTGGAGCGCCCC...GAGATTTATATAGCCAAAGACGGACTCTCTAGGTTTTGTACCGAGCCATATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR TCA 90 bp CTGGGATGGGAGATTCGCAGATGCCTACTTGATATTTCCACTTCCTTCTCTCGGCCCCGTGGGGATGTCTaGCTGGTAGAAGACTTTGAG +
Preference number: 2 (lower is better)
Translates to: LGWEIRRCLLDISTSFSRPRGDV*LVEDFE
Trigger: CTCAAAGTCTTCTACCAGTCAGACATCCCCACGGGG...CCGAGAGAAGGAAGTGGAAATATCAAGTAGGCATCTGCGAATCTCCCATCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR TCA 90 bp AAGCTGCTCTCGTCTTCCGTTTTCCAGGAGGACAGAGTGGCCCTCAGGACAGGGATCTTGAACTTCCTCTaGGCCAGGAAAAAGAAAGCT +
Preference number: 2 (lower is better)
Translates to: KLLSSSVFQEDRVALRTGILNFL*ARKKKA
Trigger: AGCTTTCTTTTTCCTGGCTCAGAGGAAGTTCAAGAT...CCCTGTCCTGAGGGCCACTCTGTCCTCCTGGAAAACGGAAGACGAGAGCAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp TACACCCATGTAGCACATGACTGGGATGGGAGATTCGCAGATGCCTACTTGATACACAGCTCCGGGCCTTaGGATCGATTGTGTCCTGTG +
Preference number: 2 (lower is better)
Translates to: YTHVAHDWDGRFADAYLIHSSGP*DRLCPV
Trigger: CACAGGACACAATCGATCCCAAGGCCCGGAGCTGTG...TATCAAGTAGGCATCTGCGAATCTCCCATCCCAGTCATGTGCTACATGGGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp CTTGATATTTCCACTTCCTTCTCTCGGAACGGGCGGCAGGAAATAAACACGATGGCAGGTTTTTGGGGGTaGGCTCCTGATATGGCTCGG +
Preference number: 2 (lower is better)
Translates to: LDISTSFSRNGRQEINTMAGFWG*APDMAR
Trigger: CCGAGCCATATCAGGAGCCCACCCCCAAAAACCTGC...CATCGTGTTTATTTCCTGCCGCCCGTTCCGAGAGAAGGAAGTGGAAATATCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR CAA 90 bp ACATACAGACGAATATCAAACTTGAGCTTGTCGATAAGGAGAGGTTaGCAGATGTACTCCTGGACCACCGCTGGCCTGCTCTGGAGGGTC +
Preference number: 2 (lower is better)
Translates to: TYRRISNLSLSIRRG*QMYSWTTAGLLWRV
Trigger: GACCCTCCAGAGCAGGCCAGCGGTGGTCCAGGAGTACATCTGCAAACCTCTCCTTATCGACAAGCTCAAGTTTGATATTCGTCTGTATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474723.5
ENST00000487468.5
3UTR-3UTR TCA 90 bp AGTTTGCAGCTCCTTATGAAGGTACGAAAGCCTGTTGGCCCCAACTTCATTGTCTTGGGGGTGGGCTCCTaGTATGGCTCGGTACAAAAC +
Preference number: 2 (lower is better)
Translates to: SLQLLMKVRKPVGPNFIVLGVGS*YGSVQN
Trigger: GTTTTGTACCGAGCCATATCAGGAGCCCACCCCCAA...GACAATGAAGTTGGGGCCAACAGGCTTTCGTACCTTCATAAGGAGCTGCAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR TCA 90 bp ATCACCACGGAGATGATGTCAGACCAGACCTTCTTGATGTCAACGCCTTTGGAATTGGGGGTGGGCTCCTaGTATGGCTCGGTACAAAAC +
Preference number: 2 (lower is better)
Translates to: ITTEMMSDQTFLMSTPLELGVGS*YGSVQN
Trigger: GTTTTGTACCGAGCCATATCAGGAGCCCACCCCCAA...TTCCAAAGGCGTTGACATCAAGAAGGTCTGGTCTGACATCATCTCCGTGGTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373778.5
ENST00000474723.5
ENST00000487468.5
3UTR-3UTR TCA 90 bp GCCTTGGGATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGCCCCAGTTGCAGACCAGACCTTCTTaGTGTCAACGCCTTTGGAAG +
Preference number: 2 (lower is better)
Translates to: ALGSIVSCAPNTTDLPQLQTRPS*CQRLWK
Trigger: CTTCCAAAGGCGTTGACATCAAGAAGGTCTGGTCTG...CAACTGGGGCAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCCCAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR TCA 90 bp GTCCTGTGCCCCAAATACAACAGATTTGCCCCAGTTGGTGCTTCCTGTGAGCCCAGGGGTCTAAGGACTTaGGTAAGACATACAGACGAA +
Preference number: 2 (lower is better)
Translates to: VLCPKYNRFAPVGASCEPRGLRT*VRHTDE
Trigger: TTCGTCTGTATGTCTTACTCAAGTCCTTAGACCCCT...GGGCTCACAGGAAGCACCAACTGGGGCAAATCTGTTGTATTTGGGGCACAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474723.5
3UTR-3UTR GCA 90 bp CTGCTGAGTTTGCAGCTCCTTATGAAGGTACGAAAGCCTGTTGGCCCCAACTTCTACTTGGGGAACACCTaGTTGAGGCAAATGGAAGGC +
Preference number: 2 (lower is better)
Translates to: LLSLQLLMKVRKPVGPNFYLGNT*LRQMEG
Trigger: GCCTTCCATTTGCCTCAAGCAGGTGTTCCCCAAGTA...GAAGTTGGGGCCAACAGGCTTTCGTACCTTCATAAGGAGCTGCAAACTCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp CTGGGATGGGAGATTCGCAGATGCCTACTTGATATTTCCACTTCCTTCTCTCGGGAAGACTTTGAGCTCTaGAGTCAGCGCGATGACCGT +
Preference number: 2 (lower is better)
Translates to: LGWEIRRCLLDISTSFSREDFEL*SQRDDR
Trigger: ACGGTCATCGCGCTGACTCCAGAGCTCAAAGTCTTC...CCGAGAGAAGGAAGTGGAAATATCAAGTAGGCATCTGCGAATCTCCCATCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR CAA 90 bp CTTATGAAGGTACGAAAGCCTGTTGGCCCCAACTTCATTGTCCCCTaGATGCCCAGGAACCGGATAAACAAATTTGCCATCCTGTCCACC +
Preference number: 2 (lower is better)
Translates to: LMKVRKPVGPNFIVP*MPRNRINKFAILST
Trigger: GGTGGACAGGATGGCAAATTTGTTTATCCGGTTCCTGGGCATCAAGGGGACAATGAAGTTGGGGCCAACAGGCTTTCGTACCTTCATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR GCA 90 bp TACACCCATGTAGCACATGACTGGGATGGGAGATTCGCAGATGCCTACTTGATATCCAGCCCTGAAAGCTaGTCTCGTCTTCCGTTTTCC +
Preference number: 2 (lower is better)
Translates to: YTHVAHDWDGRFADAYLISSPES*SRLPFS
Trigger: GGAAAACGGAAGACGAGAGCAGCTTTCAGGGCTGGA...TATCAAGTAGGCATCTGCGAATCTCCCATCCCAGTCATGTGCTACATGGGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR GCA 90 bp GTGTCCTGTGCCCCAAATACAACAGATTTGCCCCAGTTGGTGCTTCCTGTGAGCCAAATACAACAGATTTaGCCCAGTTGGTGCTTCCTG +
Preference number: 2 (lower is better)
Translates to: VSCAPNTTDLPQLVLPVSQIQQI*PSWCFL
Trigger: CAGGAAGCACCAACTGGGGCAAATCTGTTGTATTTG...GCTCACAGGAAGCACCAACTGGGGCAAATCTGTTGTATTTGGGGCACAGGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp CGCGATGACCGTCTTAATCACCACGGAGATGATGTCAGACCAGACCTTCTTGATGGTGGGCTCCTGATATaGCTCGGTACAAAACCTAGA +
Preference number: 2 (lower is better)
Translates to: RDDRLNHHGDDVRPDLLDGGLLI*LGTKPR
Trigger: TCTAGGTTTTGTACCGAGCCATATCAGGAGCCCACC...ATCAAGAAGGTCTGGTCTGACATCATCTCCGTGGTGATTAAGACGGTCATCGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373778.5
ENST00000474723.5
ENST00000487468.5
3UTR-3UTR CCA 90 bp CAGTCTGGAGCACTGGTCAGCTCGCCGTCCAAAGCATCTTCCTTTCCAGCGAATGTCTACAAAGGATGCTaGAAAAAGTCCTTTTGCTGC +
Preference number: 2 (lower is better)
Translates to: QSGALVSSPSKASSFPANVYKGC*KKSFCC
Trigger: GCAGCAAAAGGACTTTTTCCAGCATCCTTTGTAGAC...ATTCGCTGGAAAGGAAGATGCTTTGGACGGCGAGCTGACCAGTGCTCCAGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp ATGACTGATGACTCAGAAACAGGGTGTATCACCAGGAGGTGTGAGGAGGAAGGCCTTCATCAACGAGGCTaGGGACATTTTCAAACACCC +
Preference number: 2 (lower is better)
Translates to: MTDDSETGCITRRCEEEGLHQRG*GHFQTP
Trigger: GGGTGTTTGAAAATGTCCCCAGCCTCGTTGATGAAG...GCCTTCCTCCTCACACCTCCTGGTGATACACCCTGTTTCTGAGTCATCAGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR TCA 90 bp GGTACTCGCAAAGGTCAATCAGTGAGGCCACCTGCTCATGAAGTGGCAGCATCTATGTCATATGTCCGATaGCTGATGACTCAGAAACAG +
Preference number: 2 (lower is better)
Translates to: GTRKGQSVRPPAHEVAASMSYVR*LMTQKQ
Trigger: CTGTTTCTGAGTCATCAGTCATCGGACATATGACAT...AGATGCTGCCACTTCATGAGCAGGTGGCCTCACTGATTGACCTTTGCGAGTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR TCA 90 bp TCAACGCCTTTGGAAGACAGTCTACAAAGGATGCTGGAAAAAGTCCTTTTGCTGTTGGGGGTGGGCTCCTaGTATGGCTCGGTACAAAAC +
Preference number: 2 (lower is better)
Translates to: STPLEDSLQRMLEKVLLLLGVGS*YGSVQN
Trigger: GTTTTGTACCGAGCCATATCAGGAGCCCACCCCCAA...CAGCAAAAGGACTTTTTCCAGCATCCTTTGTAGACTGTCTTCCAAAGGCGTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000373778.5
ENST00000474723.5
ENST00000487468.5
3UTR-3UTR TCA 90 bp TCAACGCCTTTGGAAGACAGTCTACAAAGGATGCTGGAAAAAGTCCTTTTGCTGCACTGTCCGAGTGGATaGAGTTGCCGCTGTGGATGT +
Preference number: 2 (lower is better)
Translates to: STPLEDSLQRMLEKVLLLHCPSG*SCRCGC
Trigger: ACATCCACAGCGGCAACTTCATCCACTCGGACAGTG...CAGCAAAAGGACTTTTTCCAGCATCCTTTGTAGACTGTCTTCCAAAGGCGTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373778.5
ENST00000474723.5
ENST00000487468.5
3UTR-3UTR TCA 90 bp ACTTTGAGCTCTGGAGTCAGCGCGATGACCGTCTTAATCACCACGGAGATGATGAGGGGTCTAAGGACTTaGGTAAGACATACAGACGAA +
Preference number: 2 (lower is better)
Translates to: TLSSGVSAMTVLITTEMMRGLRT*VRHTDE
Trigger: TTCGTCTGTATGTCTTACTCAAGTCCTTAGACCCCT...CATCATCTCCGTGGTGATTAAGACGGTCATCGCGCTGACTCCAGAGCTCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474723.5
ENST00000487468.5
3UTR-3UTR GCA 90 bp GTCCTGTGCCCCAAATACAACAGATTTGCCCCAGTTGGTGCTTCCTGTGAGCCCATCGATTGTGTCCTGTaGCCCAAATACAACAGATTT +
Preference number: 2 (lower is better)
Translates to: VLCPKYNRFAPVGASCEPIDCVL*PKYNRF
Trigger: AAATCTGTTGTATTTGGGGCACAGGACACAATCGAT...GGGCTCACAGGAAGCACCAACTGGGGCAAATCTGTTGTATTTGGGGCACAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp GGGCCTTGGGATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGCCCCAGTTTCCTTTCCAGCGAATaGTTTTTCAAGCTGCTGAGA +
Preference number: 2 (lower is better)
Translates to: GPWDRLCPVPQIQQICPSFLSSE*FFKLLR
Trigger: TCTCAGCAGCTTGAAAAACCATTCGCTGGAAAGGAA...ACTGGGGCAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCCCAAGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR TCA 90 bp GGATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGCCCCAGTTGGTGCTTTCGCAGATGCCTACTTaGTATTTCCACTTCCTTCTC +
Preference number: 2 (lower is better)
Translates to: GSIVSCAPNTTDLPQLVLSQMPT*YFHFLL
Trigger: GAGAAGGAAGTGGAAATATCAAGTAGGCATCTGCGA...AAGCACCAACTGGGGCAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp GTAGAAGACTTTGAGCTCTGGAGTCAGCGCGATGACCGTCTTAATCACCACGGAGTCTACAAAGGATGCTaGAAAAAGTCCTTTTGCTGC +
Preference number: 2 (lower is better)
Translates to: VEDFELWSQRDDRLNHHGVYKGC*KKSFCC
Trigger: GCAGCAAAAGGACTTTTTCCAGCATCCTTTGTAGAC...TCCGTGGTGATTAAGACGGTCATCGCGCTGACTCCAGAGCTCAAAGTCTTCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373778.5
ENST00000474723.5
ENST00000487468.5
3UTR CAA 90 bp ATGACCGTCTTAATCACCACGGAGATGATGTCAGACCAGACCTTCTaGATGTCAACGCCTTTGGAAGACAGTCTACAAAGGATGCTGGAA +
Preference number: 2 (lower is better)
Translates to: MTVLITTEMMSDQTF*MSTPLEDSLQRMLE
Trigger: TTCCAGCATCCTTTGTAGACTGTCTTCCAAAGGCGTTGACATCAAGAAGGTCTGGTCTGACATCATCTCCGTGGTGATTAAGACGGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373778.5
ENST00000474723.5
ENST00000487468.5
3UTR-3UTR GCA 90 bp CTTGATATTTCCACTTCCTTCTCTCGGAACGGGCGGCAGGAAATAAACACGATGCAAATACAACAGATTTaGCCCAGTTGGTGCTTCCTG +
Preference number: 2 (lower is better)
Translates to: LDISTSFSRNGRQEINTMQIQQI*PSWCFL
Trigger: CAGGAAGCACCAACTGGGGCAAATCTGTTGTATTTG...CATCGTGTTTATTTCCTGCCGCCCGTTCCGAGAGAAGGAAGTGGAAATATCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp CGGGCCTTGGGATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGCCCCAGGTTCGATTCTCATACTaGGATTTGCATTTACTTCAA +
Preference number: 2 (lower is better)
Translates to: RALGSIVSCAPNTTDLPQVRFSY*DLHLLQ
Trigger: TTGAAGTAAATGCAAATCCCAGTATGAGAATCGAAC...CTGGGGCAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCCCAAGGCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CCA 90 bp CTGATATGGCTCGGTACAAAACCTAGAGAGTCCGTCTTTGGCTATATAAATCTCGGTGGGCTCCTGATATaGCTCGGTACAAAACCTAGA +
Preference number: 2 (lower is better)
Translates to: LIWLGTKPRESVFGYINLGGLLI*LGTKPR
Trigger: TCTAGGTTTTGTACCGAGCCATATCAGGAGCCCACC...GAGATTTATATAGCCAAAGACGGACTCTCTAGGTTTTGTACCGAGCCATATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373778.5
ENST00000474723.5
ENST00000487468.5
3UTR CAA 90 bp TCTAAGGACTTGAGTAAGACATACAGACGAATATCAAACTTGAGCTaGTCGATAAGGAGAGGTTTGCAGATGTACTCCTGGACCACCGCT +
Preference number: 2 (lower is better)
Translates to: SKDLSKTYRRISNLS*SIRRGLQMYSWTTA
Trigger: AGCGGTGGTCCAGGAGTACATCTGCAAACCTCTCCTTATCGACAAGCTCAAGTTTGATATTCGTCTGTATGTCTTACTCAAGTCCTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474723.5
ENST00000487468.5
3UTR CAA 90 bp AAGGGGTCTAAGGACTTGAGTAAGACATACAGACGAATATCAAACTaGAGCTTGTCGATAAGGAGAGGTTTGCAGATGTACTCCTGGACC +
Preference number: 2 (lower is better)
Translates to: KGSKDLSKTYRRISN*SLSIRRGLQMYSWT
Trigger: GGTCCAGGAGTACATCTGCAAACCTCTCCTTATCGACAAGCTCAAGTTTGATATTCGTCTGTATGTCTTACTCAAGTCCTTAGACCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474723.5
ENST00000487468.5
3UTR-3UTR TCA 90 bp TGCTCATGTTCGATTCTCATACTGGGATTTGCATTTACTTCAAGTAGTATAGGCAGTTGGTGCTTCCTGTaGGCCCAGAATAGAAGGTGC +
Preference number: 2 (lower is better)
Translates to: CSCSILILGFAFTSSSIGSWCFL*AQNRRC
Trigger: GCACCTTCTATTCTGGGCTCACAGGAAGCACCAACT...GCCTATACTACTTGAAGTAAATGCAAATCCCAGTATGAGAATCGAACATGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR GCA 90 bp CCCTGGAGAAAGTTCGTGCTCATGTTCGATTCTCATACTGGGATTTGCATTTACCAAATACAACAGATTTaGCCCAGTTGGTGCTTCCTG +
Preference number: 2 (lower is better)
Translates to: PWRKFVLMFDSHTGICIYQIQQI*PSWCFL
Trigger: CAGGAAGCACCAACTGGGGCAAATCTGTTGTATTTG...GTAAATGCAAATCCCAGTATGAGAATCGAACATGAGCACGAACTTTCTCCAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373778.5
3UTR CCA 72 bp CAGCCGCACACAGAGACAGTTCGTGGGGACCTCAGCTaGGCCCCTCGGCAGCCTGCCTGCCATTCCTCTGCA +
Preference number: 3 (lower is better)
Translates to: QPHTETVRGDLS*APRQPACHSSA
Trigger: TGCAGAGGAATGGCAGGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR CCA 72 bp GTGAAGCACAGCTCAGCCGCACACAGAGACAGTTCGTaGGGACCTCAGCTGGGCCCCTCGGCAGCCTGCCTG +
Preference number: 3 (lower is better)
Translates to: VKHSSAAHRDSS*GPQLGPSAACL
Trigger: CAGGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCGGCTGAGCTGTGCTTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CAA 90 bp GCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTGCCTGCCACAGCTCCGGGCCTaGGGATCGATTGTGTCCTGT +
Preference number: 3 (lower is better)
Translates to: AHRDSSWGPQLGPSAACLPQLRA*GSIVSC
Trigger: ACAGGACACAATCGATCCCAAGGCCCGGAGCTGTGG...CAGGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CAA 90 bp CTCAGCCGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCCACAGCTCCGGGCCTaGGGATCGATTGTGTCCTGT +
Preference number: 3 (lower is better)
Translates to: LSRTQRQFVGTSAGPLGSPQLRA*GSIVSC
Trigger: ACAGGACACAATCGATCCCAAGGCCCGGAGCTGTGG...GCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCGGCTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CAA 90 bp CAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTGCCTGCCATTCCTCTGGGATGGGAGAGCTTATaGGCACAGCTGGTGCGGGGT +
Preference number: 3 (lower is better)
Translates to: QFVGTSAGPLGSLPAIPLGWESL*AQLVRG
Trigger: ACCCCGCACCAGCTGTGCCAATAAGCTCTCCCATCC...CAGAGGAATGGCAGGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR CCA 72 bp CAGGCTGGGAACTGGCAATGGTTACCTGGAAGCACGTaGGGCCCGGCCTCCCCGTGGGGATGTCTGACTGGT +
Preference number: 3 (lower is better)
Translates to: QAGNWQWLPGST*GPASPWGCLTG
Trigger: ACCAGTCAGACATCCCCACGGGGAGGCCGGGCCCCACGTGCTTCCAGGTAACCATTGCCAGTTCCCAGCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487468.5
3UTR GCA 72 bp GAGGTTTGCAGATGTACTCCTGGACCACCGCTGGCCTaGTCTGGAGGGTCCCTGCCAGGCGGATGTCACTGG +
Preference number: 3 (lower is better)
Translates to: EVCRCTPGPPLA*SGGSLPGGCHW
Trigger: CCAGTGACATCCGCCTGGCAGGGACCCTCCAGAGCAGGCCAGCGGTGGTCCAGGAGTACATCTGCAAACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474723.5
ENST00000487468.5
3UTR CCA 72 bp TTGCAGATGTACTCCTGGACCACCGCTGGCCTGCTCTaGAGGGTCCCTGCCAGGCGGATGTCACTGGGGTCT +
Preference number: 3 (lower is better)
Translates to: LQMYSWTTAGLL*RVPARRMSLGS
Trigger: AGACCCCAGTGACATCCGCCTGGCAGGGACCCTCCAGAGCAGGCCAGCGGTGGTCCAGGAGTACATCTGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474723.5
ENST00000487468.5
3UTR-3UTR CAA 90 bp ACGCCCCGGCCACACACCAGGCGTTTTTCATCCAGCAGGGACAGGTGGTACTCGAGGTGGGCTTCGGGGTaGGCGTTGCAGTCTGGAGCA +
Preference number: 3 (lower is better)
Translates to: TPRPHTRRFSSSRDRWYSRWASG*ALQSGA
Trigger: TGCTCCAGACTGCAACGCCAACCCCGAAGCCCACCT...CGAGTACCACCTGTCCCTGCTGGATGAAAAACGCCTGGTGTGTGGCCGGGGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CAA 90 bp TCAGCCGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTCCGAGTGGATGAAGTaGCCGCTGTGGATGTTCAGT +
Preference number: 3 (lower is better)
Translates to: SAAHRDSSWGPQLGPSAASEWMK*PLWMFS
Trigger: ACTGAACATCCACAGCGGCAACTTCATCCACTCGGA...GGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR GCA 72 bp GGCAAATGGAAGGCAGGTGGGCTTCGGGGTTGGCGTTaGAGTCTGGAGCACTGGTCAGCTCGCCGTCCAAAG +
Preference number: 3 (lower is better)
Translates to: GKWKAGGLRGWR*SLEHWSARRPK
Trigger: CTTTGGACGGCGAGCTGACCAGTGCTCCAGACTGCAACGCCAACCCCGAAGCCCACCTGCCTTCCATTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR CCA 72 bp GGACAGAGTGGCCCTCAGGACAGGGTATGTCTGGGATaGGAGAGCTTATTGGCACAGCTGGTGCGGGGTGGG +
Preference number: 3 (lower is better)
Translates to: GQSGPQDRVCLG*ESLLAQLVRGG
Trigger: CCCACCCCGCACCAGCTGTGCCAATAAGCTCTCCCATCCCAGACATACCCTGTCCTGAGGGCCACTCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR CCA 72 bp AAGGAGAGGTTTGCAGATGTACTCCTGGACCACCGCTaGCCTGCTCTGGAGGGTCCCTGCCAGGCGGATGTC +
Preference number: 3 (lower is better)
Translates to: KERFADVLLDHR*PALEGPCQADV
Trigger: GACATCCGCCTGGCAGGGACCCTCCAGAGCAGGCCAGCGGTGGTCCAGGAGTACATCTGCAAACCTCTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474723.5
ENST00000487468.5
3UTR CCA 72 bp GCCCTCTTGAGGCCGGTCAAGGCTGGAAACGCAGGCTaGGAACTGGCAATGGTTACCTGGAAGCACGTGGGG +
Preference number: 3 (lower is better)
Translates to: ALLRPVKAGNAG*ELAMVTWKHVG
Trigger: CCCCACGTGCTTCCAGGTAACCATTGCCAGTTCCCAGCCTGCGTTTCCAGCCTTGACCGGCCTCAAGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487468.5
3UTR TCA 72 bp TCCTCTGCAGGCAGAATGCCTGGGGCGCTCCAGCCCTaGAAGCTGCTCTCGTCTTCCGTTTTCCAGGAGGAC +
Preference number: 3 (lower is better)
Translates to: SSAGRMPGALQP*KLLSSSVFQED
Trigger: GTCCTCCTGGAAAACGGAAGACGAGAGCAGCTTTCAGGGCTGGAGCGCCCCAGGCATTCTGCCTGCAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR CCA 72 bp AAACACGATGTTCTCAGGCTTTTCCCGGTGGGCGCGTaGAGGCCCCGGCAGCAGATCCTAACACTCGGCTTC +
Preference number: 3 (lower is better)
Translates to: KHDVLRLFPVGA*RPRQQILTLGF
Trigger: GAAGCCGAGTGTTAGGATCTGCTGCCGGGGCCTCCACGCGCCCACCGGGAAAAGCCTGAGAACATCGTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR CCA 72 bp GGTGGGCTTCGGGGTTGGCGTTGCAGTCTGGAGCACTaGTCAGCTCGCCGTCCAAAGCATCTTCCTTTCCAG +
Preference number: 3 (lower is better)
Translates to: GGLRGWRCSLEH*SARRPKHLPFQ
Trigger: CTGGAAAGGAAGATGCTTTGGACGGCGAGCTGACCAGTGCTCCAGACTGCAACGCCAACCCCGAAGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CAA 90 bp CCTCTGCAGGCAGAATGCCTGGGGCGCTCCAGCCCTGAAAGCTGCTCTCGTCTTGGGCCTTGGGATCGATaGTGTCCTGTGCCCCAAATA +
Preference number: 3 (lower is better)
Translates to: PLQAECLGRSSPESCSRLGPWDR*CPVPQI
Trigger: TATTTGGGGCACAGGACACAATCGATCCCAAGGCCC...AAGACGAGAGCAGCTTTCAGGGCTGGAGCGCCCCAGGCATTCTGCCTGCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CAA 90 bp GTCCCGCTGGTCCAGGGTCATGGAGTTCCACCTCCGTGTGATGTCAATGTAGAGGCTTCGGGGTTGGCGTaGCAGTCTGGAGCACTGGTC +
Preference number: 3 (lower is better)
Translates to: VPLVQGHGVPPPCDVNVEASGLA*QSGALV
Trigger: GACCAGTGCTCCAGACTGCAACGCCAACCCCGAAGC...CTCTACATTGACATCACACGGAGGTGGAACTCCATGACCCTGGACCAGCGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR TCA 72 bp CCCGCTGGTCCAGGGTCATGGAGTTCCACCTCCGTGTaGTGTCAATGTAGAGGATGTCCACGGCAGCCATGG +
Preference number: 3 (lower is better)
Translates to: PAGPGSWSSTSV*CQCRGCPRQPW
Trigger: CCATGGCTGCCGTGGACATCCTCTACATTGACATCACACGGAGGTGGAACTCCATGACCCTGGACCAGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR TCA 72 bp CGATCACTCATCCTACACGAAGCCAGAGAGCCCTCTTaGGGCCGGTCAAGGCTGGAAACGCAGGCTGGGAAC +
Preference number: 3 (lower is better)
Translates to: RSLILHEAREPS*GRSRLETQAGN
Trigger: GTTCCCAGCCTGCGTTTCCAGCCTTGACCGGCCTCAAGAGGGCTCTCTGGCTTCGTGTAGGATGAGTGATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487468.5
3UTR CCA 72 bp AGCTTGTCGATAAGGAGAGGTTTGCAGATGTACTCCTaGACCACCGCTGGCCTGCTCTGGAGGGTCCCTGCC +
Preference number: 3 (lower is better)
Translates to: SLSIRRGLQMYS*TTAGLLWRVPA
Trigger: GGCAGGGACCCTCCAGAGCAGGCCAGCGGTGGTCCAGGAGTACATCTGCAAACCTCTCCTTATCGACAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474723.5
ENST00000487468.5
3UTR-3UTR CAA 90 bp CGGGACGCCCCGGCCACACACCAGGCGTTTTTCATCCAGCAGGGACAGGTGGTAAACTGTTTTGCGTACTaGGGGAACACCTGCTTGAGG +
Preference number: 3 (lower is better)
Translates to: RDAPATHQAFFIQQGQVVNCFAY*GNTCLR
Trigger: CCTCAAGCAGGTGTTCCCCAAGTACGCAAAACAGTT...TACCACCTGTCCCTGCTGGATGAAAAACGCCTGGTGTGTGGCCGGGGCGTCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CAA 90 bp CGGGACGCCCCGGCCACACACCAGGCGTTTTTCATCCAGCAGGGACAGGTGGTACTGCTGCTGCTGAGTTaGCAGCTCCTTATGAAGGTA +
Preference number: 3 (lower is better)
Translates to: RDAPATHQAFFIQQGQVVLLLLS*QLLMKV
Trigger: TACCTTCATAAGGAGCTGCAAACTCAGCAGCAGCAG...TACCACCTGTCCCTGCTGGATGAAAAACGCCTGGTGTGTGGCCGGGGCGTCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CAA 90 bp CAGCTCCGGGCCTTGGGATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGGCTTCGGGGTTGGCGTaGCAGTCTGGAGCACTGGTC +
Preference number: 3 (lower is better)
Translates to: QLRALGSIVSCAPNTTDLASGLA*QSGALV
Trigger: GACCAGTGCTCCAGACTGCAACGCCAACCCCGAAGC...CAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCCCAAGGCCCGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CAA 90 bp GGGCGCTCCAGCCCTGAAAGCTGCTCTCGTCTTCCGTTTTCCAGGAGGACAGAGAGGTACGAAAGCCTGTaGGCCCCAACTTCATTGTCC +
Preference number: 3 (lower is better)
Translates to: GRSSPESCSRLPFSRRTERYESL*APTSLS
Trigger: GGACAATGAAGTTGGGGCCAACAGGCTTTCGTACCT...CTCTGTCCTCCTGGAAAACGGAAGACGAGAGCAGCTTTCAGGGCTGGAGCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR CCA 72 bp AGCTGCTCTCGTCTTCCGTTTTCCAGGAGGACAGAGTaGCCCTCAGGACAGGGTATGTCTGGGATGGGAGAG +
Preference number: 3 (lower is better)
Translates to: SCSRLPFSRRTE*PSGQGMSGMGE
Trigger: CTCTCCCATCCCAGACATACCCTGTCCTGAGGGCCACTCTGTCCTCCTGGAAAACGGAAGACGAGAGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CAA 90 bp GCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTGCCTGATATCAAACTTGAGCTaGTCGATAAGGAGAGGTTTG +
Preference number: 3 (lower is better)
Translates to: AHRDSSWGPQLGPSAACLISNLS*SIRRGL
Trigger: CAAACCTCTCCTTATCGACAAGCTCAAGTTTGATAT...CAGGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474723.5
3UTR-3UTR CAA 90 bp AAGCACAGCTCAGCCGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCAAGGGGTCTAAGGACTaGAGTAAGACATACAGACGA +
Preference number: 3 (lower is better)
Translates to: KHSSAAHRDSSWGPQLGPKGSKD*SKTYRR
Trigger: TCGTCTGTATGTCTTACTCAAGTCCTTAGACCCCTT...GGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCGGCTGAGCTGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474723.5
3UTR CCA 72 bp CCACACACCAGGCGTTTTTCATCCAGCAGGGACAGGTaGTACTCGCAAAGGTCAATCAGTGAGGCCACCTGC +
Preference number: 3 (lower is better)
Translates to: PHTRRFSSSRDR*YSQRSISEATC
Trigger: GCAGGTGGCCTCACTGATTGACCTTTGCGAGTACCACCTGTCCCTGCTGGATGAAAAACGCCTGGTGTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CAA 90 bp CGGGCCTTGGGATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGCCCCAGACAGATTTGCCCCAGTaGGTGCTTCCTGTGAGCCCA +
Preference number: 3 (lower is better)
Translates to: RALGSIVSCAPNTTDLPQTDLPQ*VLPVSP
Trigger: TGGGCTCACAGGAAGCACCAACTGGGGCAAATCTGT...CTGGGGCAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCCCAAGGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CAA 90 bp GTAGAAGACTTTGAGCTCTGGAGTCAGCGCGATGACCGTCTTAATCACCACGGACCACAGCTCCGGGCCTaGGGATCGATTGTGTCCTGT +
Preference number: 3 (lower is better)
Translates to: VEDFELWSQRDDRLNHHGPQLRA*GSIVSC
Trigger: ACAGGACACAATCGATCCCAAGGCCCGGAGCTGTGG...TCCGTGGTGATTAAGACGGTCATCGCGCTGACTCCAGAGCTCAAAGTCTTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CAA 90 bp CAGCTCCGGGCCTTGGGATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGACAGATTTGCCCCAGTaGGTGCTTCCTGTGAGCCCA +
Preference number: 3 (lower is better)
Translates to: QLRALGSIVSCAPNTTDLTDLPQ*VLPVSP
Trigger: TGGGCTCACAGGAAGCACCAACTGGGGCAAATCTGT...CAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCCCAAGGCCCGGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CAA 90 bp CAGGAAATAAACACGATGTTCTCAGGCTTTTCCCGGTGGGCGCGTGGAGGCCCCCCAAATACAACAGATTaGCCCCAGTTGGTGCTTCCT +
Preference number: 3 (lower is better)
Translates to: QEINTMFSGFSRWARGGPPNTTD*PQLVLP
Trigger: AGGAAGCACCAACTGGGGCAAATCTGTTGTATTTGG...GGGGCCTCCACGCGCCCACCGGGAAAAGCCTGAGAACATCGTGTTTATTTCCTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CAA 90 bp AAGCTGCTCTCGTCTTCCGTTTTCCAGGAGGACAGAGTGGCCCTCAGGACAGGGCCAAATACAACAGATTaGCCCCAGTTGGTGCTTCCT +
Preference number: 3 (lower is better)
Translates to: KLLSSSVFQEDRVALRTGPNTTD*PQLVLP
Trigger: AGGAAGCACCAACTGGGGCAAATCTGTTGTATTTGG...CCCTGTCCTGAGGGCCACTCTGTCCTCCTGGAAAACGGAAGACGAGAGCAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR TCA 72 bp CAGCAGGGACAGGTGGTACTCGCAAAGGTCAATCAGTaGGGCCACCTGCTCATGAAGTGGCAGCATCTTGAA +
Preference number: 3 (lower is better)
Translates to: QQGQVVLAKVNQ*GHLLMKWQHLE
Trigger: TTCAAGATGCTGCCACTTCATGAGCAGGTGGCCTCACTGATTGACCTTTGCGAGTACCACCTGTCCCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CAA 90 bp GTAGAAGACTTTGAGCTCTGGAGTCAGCGCGATGACCGTCTTAATCACCACGGAGGGCCTTGGGATCGATaGTGTCCTGTGCCCCAAATA +
Preference number: 3 (lower is better)
Translates to: VEDFELWSQRDDRLNHHGGPWDR*CPVPQI
Trigger: TATTTGGGGCACAGGACACAATCGATCCCAAGGCCC...TCCGTGGTGATTAAGACGGTCATCGCGCTGACTCCAGAGCTCAAAGTCTTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CAA 90 bp GTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCTCCGAGTGGATGAAGTaGCCGCTGTGGATGTTCAGT +
Preference number: 3 (lower is better)
Translates to: VACPKSHREQTESLEVGPSEWMK*PLWMFS
Trigger: ACTGAACATCCACAGCGGCAACTTCATCCACTCGGA...GGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487468.5
3UTR GCA 72 bp CATCCTGTCCACCAGGCGCAGGTAGTTGAACTGTTTTaGGTACTTGGGGAACACCTGCTTGAGGCAAATGGA +
Preference number: 3 (lower is better)
Translates to: HPVHQAQVVELF*VLGEHLLEANG
Trigger: TCCATTTGCCTCAAGCAGGTGTTCCCCAAGTACGCAAAACAGTTCAACTACCTGCGCCTGGTGGACAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR CCA 72 bp CTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTaGAAGTTGGGCCCAGGTTTAACACCCAAGCCCACA +
Preference number: 3 (lower is better)
Translates to: LAPNHTGSKQKA*KLGPGLTPKPT
Trigger: TGTGGGCTTGGGTGTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
3UTR-3UTR CAA 90 bp GCTGCTGCTGAGTTTGCAGCTCCTTATGAAGGTACGAAAGCCTGTTGGCCCCAACTGCTGCTGCTGAGTTaGCAGCTCCTTATGAAGGTA +
Preference number: 3 (lower is better)
Translates to: AAAEFAAPYEGTKACWPQLLLLS*QLLMKV
Trigger: TACCTTCATAAGGAGCTGCAAACTCAGCAGCAGCAG...TTGGGGCCAACAGGCTTTCGTACCTTCATAAGGAGCTGCAAACTCAGCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CAA 90 bp CAGCTCCGGGCCTTGGGATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGCCAAATACAACAGATTaGCCCCAGTTGGTGCTTCCT +
Preference number: 3 (lower is better)
Translates to: QLRALGSIVSCAPNTTDLPNTTD*PQLVLP
Trigger: AGGAAGCACCAACTGGGGCAAATCTGTTGTATTTGG...CAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCCCAAGGCCCGGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR CCA 72 bp GAGTTTGCAGCTCCTTATGAAGGTACGAAAGCCTGTTaGCCCCAACTTCATTGTCCCCTTGATGCCCAGGAA +
Preference number: 3 (lower is better)
Translates to: EFAAPYEGTKAC*PQLHCPLDAQE
Trigger: TTCCTGGGCATCAAGGGGACAATGAAGTTGGGGCCAACAGGCTTTCGTACCTTCATAAGGAGCTGCAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CAA 90 bp CTGGGATGGGAGATTCGCAGATGCCTACTTGATATTTCCACTTCCTTCTCTCGGTCGATAAGGAGAGGTTaGCAGATGTACTCCTGGACC +
Preference number: 3 (lower is better)
Translates to: LGWEIRRCLLDISTSFSRSIRRG*QMYSWT
Trigger: GGTCCAGGAGTACATCTGCAAACCTCTCCTTATCGA...CCGAGAGAAGGAAGTGGAAATATCAAGTAGGCATCTGCGAATCTCCCATCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474723.5
3UTR-3UTR CAA 90 bp ATGACTGATGACTCAGAAACAGGGTGTATCACCAGGAGGTGTGAGGAGGAAGGCTTGATGTCAACGCCTTaGGAAGACAGTCTACAAAGG +
Preference number: 3 (lower is better)
Translates to: MTDDSETGCITRRCEEEGLMSTP*EDSLQR
Trigger: CCTTTGTAGACTGTCTTCCAAAGGCGTTGACATCAA...GCCTTCCTCCTCACACCTCCTGGTGATACACCCTGTTTCTGAGTCATCAGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CAA 90 bp CTTGATATTTCCACTTCCTTCTCTCGGAACGGGCGGCAGGAAATAAACACGATGTCAGACCAGACCTTCTaGATGTCAACGCCTTTGGAA +
Preference number: 3 (lower is better)
Translates to: LDISTSFSRNGRQEINTMSDQTF*MSTPLE
Trigger: TTCCAAAGGCGTTGACATCAAGAAGGTCTGGTCTGA...CATCGTGTTTATTTCCTGCCGCCCGTTCCGAGAGAAGGAAGTGGAAATATCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR CCA 72 bp CAGCTCGCCGTCCAAAGCATCTTCCTTTCCAGCGAATaGTTTTTCAAGCTGCTGAGACTGATTCTCTCTTTT +
Preference number: 3 (lower is better)
Translates to: QLAVQSIFLSSE*FFKLLRLILSF
Trigger: AAAAGAGAGAATCAGTCTCAGCAGCTTGAAAAACCATTCGCTGGAAAGGAAGATGCTTTGGACGGCGAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR-3UTR CAA 90 bp GATAGGTATTCTTCATTTCATTTTACAGGTAACAGAGGGGAAGTAGCTTGCCCCGAGCAAACAGAAAGCTaGGAAGTTGGGCCCAGGTTT +
Preference number: 3 (lower is better)
Translates to: DRYSSFHFTGNRGEVACPEQTES*EVGPRF
Trigger: AAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTC...GGGGCAAGCTACTTCCCCTCTGTTACCTGTAAAATGAAATGAAGAATACCTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
3UTR TCA 72 bp ATGAGGTTAATCTGTTCACTACACCCATGTAGCACATaGCTGGGATGGGAGATTCGCAGATGCCTACTTGAT +
Preference number: 3 (lower is better)
Translates to: MRLICSLHPCST*LGWEIRRCLLD
Trigger: ATCAAGTAGGCATCTGCGAATCTCCCATCCCAGTCATGTGCTACATGGGTGTAGTGAACAGATTAACCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR GCA 72 bp TCATTTCATTTTACAGGTAACAGAGGGGAAGTAGCTTaGCCCAAATCACACAGGGAGCAAACAGAAAGCTTG +
Preference number: 3 (lower is better)
Translates to: SFHFTGNRGEVA*PKSHREQTESL
Trigger: CAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCCCCTCTGTTACCTGTAAAATGAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR TCA 90 bp CGGGACGCCCCGGCCACACACCAGGCGTTTTTCATCCAGCAGGGACAGGTGGTAGTGGGCGGCGGCCGCTaGAGGACCTGGGTGTTCCCC +
Preference number: 4 (lower is better)
Translates to: RDAPATHQAFFIQQGQVVVGGGR*RTWVFP
Trigger: GGGGAACACCCAGGTCCTTCAGCGGCCGCCGCCCAC...TACCACCTGTCCCTGCTGGATGAAAAACGCCTGGTGTGTGGCCGGGGCGTCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS-3UTR GCA 90 bp CTCAGCCGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCGGGCTGCTCCTCCCCTaGCTTGCACTCCGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: LSRTQRQFVGTSAGPLGSGLLLP*LALRFP
Trigger: GGGGAACCGGAGTGCAAGGCAGGGGAGGAGCAGCCC...GCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCGGCTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS-3UTR GCA 90 bp CACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTGCCTGCCAGGACCACCGCTGGCCTaGTCTGGAGGGTCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: HRDSSWGPQLGPSAACLPGPPLA*SGGSLP
Trigger: TGGCAGGGACCCTCCAGAGCAGGCCAGCGGTGGTCC...TGGCAGGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS-3UTR CCA 90 bp GAAGCACAGCTCAGCCGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTTTGGCCGCCGCTTTaGCCGCAGCCACCGCCTCCG +
Preference number: 4 (lower is better)
Translates to: EAQLSRTQRQFVGTSAGPLWPPL*PQPPPP
Trigger: CGGAGGCGGTGGCTGCGGCCAAAGCGGCGGCCAAAG...GGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCGGCTGAGCTGTGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS-3UTR CCA 90 bp CCTCTGCAGGCAGAATGCCTGGGGCGCTCCAGCCCTGAAAGCTGCTCTCGTCTTCGTGGGGACCTCAGCTaGGCCCCTCGGCAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: PLQAECLGRSSPESCSRLRGDLS*APRQPA
Trigger: GGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACG...AAGACGAGAGCAGCTTTCAGGGCTGGAGCGCCCCAGGCATTCTGCCTGCAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp AGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTGCCTGCCATTCAAATCTGGAAGCACGTaGGGCCCGGCCTCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: RDSSWGPQLGPSAACLPFKSGST*GPASPW
Trigger: CCACGGGGAGGCCGGGCCCCACGTGCTTCCAGATTT...GAATGGCAGGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp GTTGGGCCCAGGTTTAACACCCAAGCCCACAGCACCACCAACACTGTCCCCTCCTGGAGCTGTCCACGGTaGCCGGCCGCTGGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: VGPRFNTQAHSTTNTVPSWSCPR*PAAGSR
Trigger: ACGGCTCCCAGCGGCCGGTCACCGTGGACAGCTCCA...GGAGGGGACAGTGTTGGTGGTGCTGTGGGCTTGGGTGTTAAACCTGGGCCCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR CCA 90 bp CCGGCAGCAGATCCTAACACTCGGCTTCCTCTCCACAGCTCCGGGCCTTGGGATACGGTGACCGGCCGCTaGGAGCCGTTCTCGCCGGAA +
Preference number: 4 (lower is better)
Translates to: PAADPNTRLPLHSSGPWDTVTGR*EPFSPE
Trigger: TTCCGGCGAGAACGGCTCCCAGCGGCCGGTCACCGT...ATCCCAAGGCCCGGAGCTGTGGAGAGGAAGCCGAGTGTTAGGATCTGCTGCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp AAGCACAGCTCAGCCGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCCTGCAGACACATCCCTaGGTCCCGCTGGTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: KHSSAAHRDSSWGPQLGPLQTHP*VPLVQG
Trigger: ACCCTGGACCAGCGGGACTCAGGGATGTGTCTGCAG...GGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCGGCTGAGCTGTGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR GCA 90 bp GAAATAAACACGATGTTCTCAGGCTTTTCCCGGTGGGCGCGTGGAGGCCCCGGCAGTCCGCCACCAAACTaGCGCCGCTGCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: EINTMFSGFSRWARGGPGSPPPN*RRCSRC
Trigger: GCAGCGGCTGCAGCGGCGGCAGTTTGGTGGCGGACT...GCCGGGGCCTCCACGCGCCCACCGGGAAAAGCCTGAGAACATCGTGTTTATTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS-3UTR GCA 90 bp GAACGGGCGGCAGGAAATAAACACGATGTTCTCAGGCTTTTCCCGGTGGGCGCGGCTCCTCCCCTGCCTTaGACTCCGGTTCCCCGGCCG +
Preference number: 4 (lower is better)
Translates to: ERAAGNKHDVLRLFPVGAAPPLP*TPVPRP
Trigger: CGGCCGGGGAACCGGAGTGCAAGGCAGGGGAGGAGC...CGCGCCCACCGGGAAAAGCCTGAGAACATCGTGTTTATTTCCTGCCGCCCGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS-3UTR GCA 90 bp AGCCAGAGAGCCCTCTTGAGGCCGGTCAAGGCTGGAAACGCAGGCTGGGAACTGGCTCTGGAGGGTCCCTaGCAGGCGGATGTCACTGGG +
Preference number: 4 (lower is better)
Translates to: SQRALLRPVKAGNAGWELALEGP*QADVTG
Trigger: CCCAGTGACATCCGCCTGGCAGGGACCCTCCAGAGC...CAGTTCCCAGCCTGCGTTTCCAGCCTTGACCGGCCTCAAGAGGGCTCTCTGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487468.5
CDS-3UTR GCA 90 bp GTTGGGCCCAGGTTTAACACCCAAGCCCACAGCACCACCAACACTGTCCCCTCCGGACCACCGCTGGCCTaGTCTGGAGGGTCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: VGPRFNTQAHSTTNTVPSGPPLA*SGGSLP
Trigger: TGGCAGGGACCCTCCAGAGCAGGCCAGCGGTGGTCC...GGAGGGGACAGTGTTGGTGGTGCTGTGGGCTTGGGTGTTAAACCTGGGCCCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR GCA 90 bp GGTGAAGCACAGCTCAGCCGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCTCTGCAGGCAGAATaGCTGGGGCGCTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: GEAQLSRTQRQFVGTSAGPLQAE*LGRSSP
Trigger: AGGGCTGGAGCGCCCCAGGCATTCTGCCTGCAGAGG...CCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCGGCTGAGCTGTGCTTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR GCA 90 bp AGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTGCCTGCCATTCTGCCTGCCATTCCTCTaGAGGCAGAATGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RDSSWGPQLGPSAACLPFCLPFL*RQNAWG
Trigger: GCCCCAGGCATTCTGCCTGCAGAGGAATGGCAGGCA...GAATGGCAGGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp GCTCTGGAGGGTCCCTGCCAGGCGGATGTCACTGGGGTCTTTAATGAGGTAGATGCACCGGCTTCGGCTTaGACGGGGGCAGCGTGGGCG +
Preference number: 4 (lower is better)
Translates to: ALEGPCQADVTGVFNEVDAPASA*TGAAWA
Trigger: CGCCCACGCTGCCCCCGTCCAAGCCGAAGCCGGTGC...ATCTACCTCATTAAAGACCCCAGTGACATCCGCCTGGCAGGGACCCTCCAGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS-3UTR CCA 90 bp AGGCAGAATGCCTGGGGCGCTCCAGCCCTGAAAGCTGCTCTCGTCTTCCGTTTTACCGCTGGCCTGCTCTaGAGGGTCCCTGCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: RQNAWGAPALKAALVFRFTAGLL*RVPARR
Trigger: CCGCCTGGCAGGGACCCTCCAGAGCAGGCCAGCGGT...AAAACGGAAGACGAGAGCAGCTTTCAGGGCTGGAGCGCCCCAGGCATTCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS-3UTR CCA 90 bp CAGCCGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTGCAGGTTTTTGGGGGTaGGCTCCTGATATGGCTCGG +
Preference number: 4 (lower is better)
Translates to: QPHTETVRGDLSWAPRQPAGFWG*APDMAR
Trigger: CCGAGCCATATCAGGAGCCCACCCCCAAAAACCTGC...AGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp CGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTGCCTATCCCTGAGTCCCGCTaGTCCAGGGTCATGGAGTTC +
Preference number: 4 (lower is better)
Translates to: RTQRQFVGTSAGPLGSLPIPESR*SRVMEF
Trigger: GAACTCCATGACCCTGGACCAGCGGGACTCAGGGAT...AGGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp CAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTGCCTGCCATTCCTCTGGATGGGAGAGCTTATTaGCACAGCTGGTGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: QFVGTSAGPLGSLPAIPLDGRAY*HSWCGV
Trigger: CACCCCGCACCAGCTGTGCCAATAAGCTCTCCCATC...CAGAGGAATGGCAGGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp CCACCGCTGGCCTGCTCTGGAGGGTCCCTGCCAGGCGGATGTCACTGGGGTCTTCCCCGTGGGGATGTCTaGCTGGTAGAAGACTTTGAG +
Preference number: 4 (lower is better)
Translates to: PPLACSGGSLPGGCHWGLPRGDV*LVEDFE
Trigger: CTCAAAGTCTTCTACCAGTCAGACATCCCCACGGGG...AAGACCCCAGTGACATCCGCCTGGCAGGGACCCTCCAGAGCAGGCCAGCGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000474723.5
ENST00000487468.5
CDS-3UTR GCA 90 bp CAGTCTGGAGCACTGGTCAGCTCGCCGTCCAAAGCATCTTCCTTTCCAGCGAATTGCCCCGCCGCATGGTaGTCAGGGCCGGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: QSGALVSSPSKASSFPANCPAAW*SGPGPV
Trigger: CACTGGCCCCGGCCCTGAGCACCATGCGGCGGGGCA...ATTCGCTGGAAAGGAAGATGCTTTGGACGGCGAGCTGACCAGTGCTCCAGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS-3UTR GCA 90 bp CCGTTTTCCAGGAGGACAGAGTGGCCCTCAGGACAGGGTATGTCTGGGATGGGATGCGGGCAGAGGCCCTaGACCGGCTTCGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: PFSRRTEWPSGQGMSGMGCGQRP*TGFGLD
Trigger: GTCCAAGCCGAAGCCGGTGCAGGGCCTCTGCCCGCA...TCCCATCCCAGACATACCCTGTCCTGAGGGCCACTCTGTCCTCCTGGAAAACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS-3UTR CCA 90 bp GAGGCCCCGGCAGCAGATCCTAACACTCGGCTTCCTCTCCACAGCTCCGGGCCTTGCAGTCTGGAGCACTaGTCAGCTCGCCGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: EAPAADPNTRLPLHSSGPCSLEH*SARRPK
Trigger: CTTTGGACGGCGAGCTGACCAGTGCTCCAGACTGCA...AGGCCCGGAGCTGTGGAGAGGAAGCCGAGTGTTAGGATCTGCTGCCGGGGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp GTCCCGCTGGTCCAGGGTCATGGAGTTCCACCTCCGTGTGATGTCAATGTAGAGTTGTCCCCTGCTGGCTaGGCCGAGGGGGAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: VPLVQGHGVPPPCDVNVELSPAG*AEGEGS
Trigger: GGAGCCCTCCCCCTCGGCCCAGCCAGCAGGGGACAA...CTCTACATTGACATCACACGGAGGTGGAACTCCATGACCCTGGACCAGCGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp AGAGTGGCCCTCAGGACAGGGTATGTCTGGGATGGGAGAGCTTATTGGCACAGCTTCCCGGTGGGCGCGTaGAGGCCCCGGCAGCAGATC +
Preference number: 4 (lower is better)
Translates to: RVALRTGYVWDGRAYWHSFPVGA*RPRQQI
Trigger: GATCTGCTGCCGGGGCCTCCACGCGCCCACCGGGAA...GCTGTGCCAATAAGCTCTCCCATCCCAGACATACCCTGTCCTGAGGGCCACTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp AGCCAGAGAGCCCTCTTGAGGCCGGTCAAGGCTGGAAACGCAGGCTGGGAACTGCTGGCAATGGTTACCTaGAAGCACGTGGGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: SQRALLRPVKAGNAGWELLAMVT*KHVGPG
Trigger: GCCGGGCCCCACGTGCTTCCAGGTAACCATTGCCAG...CAGTTCCCAGCCTGCGTTTCCAGCCTTGACCGGCCTCAAGAGGGCTCTCTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487468.5
CDS-3UTR CCA 90 bp CCACCGCTGGCCTGCTCTGGAGGGTCCCTGCCAGGCGGATGTCACTGGGGTCTTGCTGGAAACGCAGGCTaGGAACTGGCAATGGTTACC +
Preference number: 4 (lower is better)
Translates to: PPLACSGGSLPGGCHWGLAGNAG*ELAMVT
Trigger: GGTAACCATTGCCAGTTCCCAGCCTGCGTTTCCAGC...AAGACCCCAGTGACATCCGCCTGGCAGGGACCCTCCAGAGCAGGCCAGCGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487468.5
CDS-3UTR TCA 90 bp CACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTGCCTGCCAGGCGCAGAGTGTCTCTaGTCACAGCCACTTTCACTT +
Preference number: 4 (lower is better)
Translates to: HRDSSWGPQLGPSAACLPGAECL*SQPLSL
Trigger: AAGTGAAAGTGGCTGTGATCAGAGACACTCTGCGCC...TGGCAGGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp CAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTGCCTGCCATTCCTCTGGGCGCAGAGTGTCTCTaGTCACAGCCACTTTCACTT +
Preference number: 4 (lower is better)
Translates to: QFVGTSAGPLGSLPAIPLGAECL*SQPLSL
Trigger: AAGTGAAAGTGGCTGTGATCAGAGACACTCTGCGCC...CAGAGGAATGGCAGGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR GCA 90 bp GATCCTAACACTCGGCTTCCTCTCCACAGCTCCGGGCCTTGGGATCGATTGTGTGGCCCGAGCTCCGCTTaGAGCTTCGGCCCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: DPNTRLPLHSSGPWDRLCGPSSA*SFGPCP
Trigger: GGGACAAGGGCCGAAGCTGCAAGCGGAGCTCGGGCC...ACACAATCGATCCCAAGGCCCGGAGCTGTGGAGAGGAAGCCGAGTGTTAGGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS-3UTR GCA 90 bp AGGCAGAATGCCTGGGGCGCTCCAGCCCTGAAAGCTGCTCTCGTCTTCCGTTTTGCTCTGGAGGGTCCCTaGCAGGCGGATGTCACTGGG +
Preference number: 4 (lower is better)
Translates to: RQNAWGAPALKAALVFRFALEGP*QADVTG
Trigger: CCCAGTGACATCCGCCTGGCAGGGACCCTCCAGAGC...AAAACGGAAGACGAGAGCAGCTTTCAGGGCTGGAGCGCCCCAGGCATTCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS-3UTR GCA 90 bp GTTGGGCCCAGGTTTAACACCCAAGCCCACAGCACCACCAACACTGTCCCCTCCCCTCATAGGCGAGGCTaGCCACGTGACCCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: VGPRFNTQAHSTTNTVPSPHRRG*PRDPAC
Trigger: ACAGGCAGGGTCACGTGGGCAGCCTCGCCTATGAGG...GGAGGGGACAGTGTTGGTGGTGCTGTGGGCTTGGGTGTTAAACCTGGGCCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR CCA 90 bp ACTCCTGGACCACCGCTGGCCTGCTCTGGAGGGTCCCTGCCAGGCGGATGTCACTCCTTCCACTTGAGCTaGCGGATGCTGATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: TPGPPLACSGGSLPGGCHSFHLS*RMLIFR
Trigger: CCTGAAGATCAGCATCCGCCAGCTCAAGTGGAAGGA...GTGACATCCGCCTGGCAGGGACCCTCCAGAGCAGGCCAGCGGTGGTCCAGGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474723.5
ENST00000487468.5
CDS-3UTR CCA 90 bp CAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTGCCTGCCATTCCTCTGGGTACGAAAGCCTGTTaGCCCCAACTTCATTGTCCC +
Preference number: 4 (lower is better)
Translates to: QFVGTSAGPLGSLPAIPLGTKAC*PQLHCP
Trigger: GGGACAATGAAGTTGGGGCCAACAGGCTTTCGTACC...CAGAGGAATGGCAGGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp CGGGCCTTGGGATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGCCCCAGTTGTCCCCTGCTGGCTaGGCCGAGGGGGAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RALGSIVSCAPNTTDLPQLSPAG*AEGEGS
Trigger: GGAGCCCTCCCCCTCGGCCCAGCCAGCAGGGGACAA...CTGGGGCAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCCCAAGGCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp GTGTCCTGTGCCCCAAATACAACAGATTTGCCCCAGTTGGTGCTTCCTGTGAGCCGTGGGGACCTCAGCTaGGCCCCTCGGCAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: VSCAPNTTDLPQLVLPVSRGDLS*APRQPA
Trigger: GGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACG...GCTCACAGGAAGCACCAACTGGGGCAAATCTGTTGTATTTGGGGCACAGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR CAA 72 bp TGCTTGAGGCAAATGGAAGGCAGGTGGGCTTCGGGGTaGGCGTTGCAGTCTGGAGCACTGGTCAGCTCGCCG +
Preference number: 4 (lower is better)
Translates to: CLRQMEGRWASG*ALQSGALVSSP
Trigger: CGGCGAGCTGACCAGTGCTCCAGACTGCAACGCCAACCCCGAAGCCCACCTGCCTTCCATTTGCCTCAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp CCAGAGAGCCCTCTTGAGGCCGGTCAAGGCTGGAAACGCAGGCTGGGAACTGGCTTGGGGGTGGGCTCCTaGTATGGCTCGGTACAAAAC +
Preference number: 4 (lower is better)
Translates to: PESPLEAGQGWKRRLGTGLGVGS*YGSVQN
Trigger: GTTTTGTACCGAGCCATATCAGGAGCCCACCCCCAA...GCCAGTTCCCAGCCTGCGTTTCCAGCCTTGACCGGCCTCAAGAGGGCTCTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487468.5
CDS-3UTR TCA 90 bp GCACAGCTCAGCCGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCACTGGTAGAAGACTTTaGGCTCTGGAGTCAGCGCGA +
Preference number: 4 (lower is better)
Translates to: AQLSRTQRQFVGTSAGPLTGRRL*ALESAR
Trigger: TCGCGCTGACTCCAGAGCTCAAAGTCTTCTACCAGT...GAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCGGCTGAGCTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp CCGTTTTCCAGGAGGACAGAGTGGCCCTCAGGACAGGGTATGTCTGGGATGGGAAACCAGCCAGCCTGGTaGAGCACAGCTCAGCCGCAC +
Preference number: 4 (lower is better)
Translates to: PFSRRTEWPSGQGMSGMGNQPAW*STAQPH
Trigger: GTGCGGCTGAGCTGTGCTTCACCAGGCTGGCTGGTT...TCCCATCCCAGACATACCCTGTCCTGAGGGCCACTCTGTCCTCCTGGAAAACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR GCA 90 bp GGTAACAGAGGGGAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTCCCGGGGCTTCCCGTaGGGGCAGAGGCCCTGCACC +
Preference number: 4 (lower is better)
Translates to: GNRGEVACPKSHREQTESSRGFP*GQRPCT
Trigger: GGTGCAGGGCCTCTGCCCGCACGGGAAGCCCCGGGA...GCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCCCCTCTGTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR GCA 90 bp GCAGATGCCTACTTGATATTTCCACTTCCTTCTCTCGGAACGGGCGGCAGGAAATCCCGGGGCTTCCCGTaGGGGCAGAGGCCCTGCACC +
Preference number: 4 (lower is better)
Translates to: ADAYLIFPLPSLGTGGRKSRGFP*GQRPCT
Trigger: GGTGCAGGGCCTCTGCCCGCACGGGAAGCCCCGGGA...TTTCCTGCCGCCCGTTCCGAGAGAAGGAAGTGGAAATATCAAGTAGGCATCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS-3UTR CCA 90 bp TTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTGCACCGGCTTCGGCTTaGACGGGGGCAGCGTGGGCG +
Preference number: 4 (lower is better)
Translates to: LPQITQGANRKLGSWAQVAPASA*TGAAWA
Trigger: CGCCCACGCTGCCCCCGTCCAAGCCGAAGCCGGTGC...AACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR CCA 90 bp AAGCACAGCTCAGCCGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCCAAGCGCCGGCCAAATaGGAACTCCTTCCACTTGAG +
Preference number: 4 (lower is better)
Translates to: KHSSAAHRDSSWGPQLGPQAPAK*ELLPLE
Trigger: CTCAAGTGGAAGGAGTTCCCATTTGGCCGGCGCTTG...GGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCGGCTGAGCTGTGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp CTCTCGTCTTCCGTTTTCCAGGAGGACAGAGTGGCCCTCAGGACAGGGTATGTCAAATCTGGAAGCACGTaGGGCCCGGCCTCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: LSSSVFQEDRVALRTGYVKSGST*GPASPW
Trigger: CCACGGGGAGGCCGGGCCCCACGTGCTTCCAGATTT...GACATACCCTGTCCTGAGGGCCACTCTGTCCTCCTGGAAAACGGAAGACGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp GGGCGCTCCAGCCCTGAAAGCTGCTCTCGTCTTCCGTTTTCCAGGAGGACAGAGGTTGGCGTTGCAGTCTaGAGCACTGGTCAGCTCGCC +
Preference number: 4 (lower is better)
Translates to: GRSSPESCSRLPFSRRTEVGVAV*STGQLA
Trigger: GGCGAGCTGACCAGTGCTCCAGACTGCAACGCCAAC...CTCTGTCCTCCTGGAAAACGGAAGACGAGAGCAGCTTTCAGGGCTGGAGCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp ATAAACACGATGTTCTCAGGCTTTTCCCGGTGGGCGCGTGGAGGCCCCGGCAGCCAAATGGAAGGCAGGTaGGCTTCGGGGTTGGCGTTG +
Preference number: 4 (lower is better)
Translates to: INTMFSGFSRWARGGPGSQMEGR*ASGLAL
Trigger: CAACGCCAACCCCGAAGCCCACCTGCCTTCCATTTG...GCTGCCGGGGCCTCCACGCGCCCACCGGGAAAAGCCTGAGAACATCGTGTTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp GCCCCGGCCACACACCAGGCGTTTTTCATCCAGCAGGGACAGGTGGTACTCGCAGATGGGAGAGCTTATTaGCACAGCTGGTGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: APATHQAFFIQQGQVVLADGRAY*HSWCGV
Trigger: CACCCCGCACCAGCTGTGCCAATAAGCTCTCCCATC...TGCGAGTACCACCTGTCCCTGCTGGATGAAAAACGCCTGGTGTGTGGCCGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp GCTGCTGCTGAGTTTGCAGCTCCTTATGAAGGTACGAAAGCCTGTTGGCCCCAATCAGGCTTTTCCCGGTaGGCGCGTGGAGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: AAAEFAAPYEGTKACWPQSGFSR*ARGGPG
Trigger: GCCGGGGCCTCCACGCGCCCACCGGGAAAAGCCTGA...TTGGGGCCAACAGGCTTTCGTACCTTCATAAGGAGCTGCAAACTCAGCAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR CAA 72 bp AGGCAAATGGAAGGCAGGTGGGCTTCGGGGTTGGCGTaGCAGTCTGGAGCACTGGTCAGCTCGCCGTCCAAA +
Preference number: 4 (lower is better)
Translates to: RQMEGRWASGLA*QSGALVSSPSK
Trigger: TTTGGACGGCGAGCTGACCAGTGCTCCAGACTGCAACGCCAACCCCGAAGCCCACCTGCCTTCCATTTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp AACAGAGGGGAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGTGGGCGGCGGCCGCTaGAGGACCTGGGTGTTCCCC +
Preference number: 4 (lower is better)
Translates to: NRGEVACPKSHREQTESLVGGGR*RTWVFP
Trigger: GGGGAACACCCAGGTCCTTCAGCGGCCGCCGCCCAC...CAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCCCCTCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR TCA 90 bp GCAGATGCCTACTTGATATTTCCACTTCCTTCTCTCGGAACGGGCGGCAGGAAATGGAGCTGTCCACGGTaGCCGGCCGCTGGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: ADAYLIFPLPSLGTGGRKWSCPR*PAAGSR
Trigger: ACGGCTCCCAGCGGCCGGTCACCGTGGACAGCTCCA...TTTCCTGCCGCCCGTTCCGAGAGAAGGAAGTGGAAATATCAAGTAGGCATCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp ACTCCTGGACCACCGCTGGCCTGCTCTGGAGGGTCCCTGCCAGGCGGATGTCACGTTTGCAGCTCCTTATaGAGGTACGAAAGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: TPGPPLACSGGSLPGGCHVCSSL*RYESLL
Trigger: CAACAGGCTTTCGTACCTTCATAAGGAGCTGCAAAC...GTGACATCCGCCTGGCAGGGACCCTCCAGAGCAGGCCAGCGGTGGTCCAGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS-3UTR TCA 90 bp CAGTCTGGAGCACTGGTCAGCTCGCCGTCCAAAGCATCTTCCTTTCCAGCGAATGGGGCGCTCCAGCCCTaGAAGCTGCTCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: QSGALVSSPSKASSFPANGALQP*KLLSSS
Trigger: GGAAGACGAGAGCAGCTTTCAGGGCTGGAGCGCCCC...ATTCGCTGGAAAGGAAGATGCTTTGGACGGCGAGCTGACCAGTGCTCCAGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp GTCCCGCTGGTCCAGGGTCATGGAGTTCCACCTCCGTGTGATGTCAATGTAGAGAACCAGCCAGCCTGGTaGAGCACAGCTCAGCCGCAC +
Preference number: 4 (lower is better)
Translates to: VPLVQGHGVPPPCDVNVENQPAW*STAQPH
Trigger: GTGCGGCTGAGCTGTGCTTCACCAGGCTGGCTGGTT...CTCTACATTGACATCACACGGAGGTGGAACTCCATGACCCTGGACCAGCGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp CACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACACCCAAGCGCGCGTGGGGCTCGTaGGCCTGGGGACTGGGAGTA +
Preference number: 4 (lower is better)
Translates to: HTGSKQKAWKLGPGLTPKRAWGS*AWGLGV
Trigger: TACTCCCAGTCCCCAGGCTCACGAGCCCCACGCGCG...CTTGGGTGTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR GCA 90 bp CACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACACCCAAGCCGGGCTGCTCCTCCCCTaGCTTGCACTCCGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: HREQTESLEVGPRFNTQAGLLLP*LALRFP
Trigger: GGGGAACCGGAGTGCAAGGCAGGGGAGGAGCAGCCC...GGCTTGGGTGTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR GCA 90 bp TCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACACCCAACGCCCACCCCGCGGATaGGCTGGATCTCGAGGGCGC +
Preference number: 4 (lower is better)
Translates to: SHREQTESLEVGPRFNTQRPPRG*AGSRGR
Trigger: GCGCCCTCGAGATCCAGCGCATCCGCGGGGTGGGCG...TTGGGTGTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR CCA 90 bp AATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACACCCTGGACGGGGGCAGCGTaGGCGGCGGCCGCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: NHTGSKQKAWKLGPGLTPWTGAA*AAAAEG
Trigger: TCCTTCAGCGGCCGCCGCCCACGCTGCCCCCGTCCA...GGGTGTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR CCA 90 bp CAGTCTGGAGCACTGGTCAGCTCGCCGTCCAAAGCATCTTCCTTTCCAGCGAATTTCTCGCCGGAACCGTaGCCCGAGCTCCGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: QSGALVSSPSKASSFPANFSPEP*PELRLQ
Trigger: CTGCAAGCGGAGCTCGGGCCACGGTTCCGGCGAGAA...ATTCGCTGGAAAGGAAGATGCTTTGGACGGCGAGCTGACCAGTGCTCCAGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS-3UTR CCA 90 bp GCCCCGGCCACACACCAGGCGTTTTTCATCCAGCAGGGACAGGTGGTACTCGCATCAAAGCCTAAAATCTaGAAGCACGTGGGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: APATHQAFFIQQGQVVLASKPKI*KHVGPG
Trigger: GCCGGGCCCCACGTGCTTCCAGATTTTAGGCTTTGA...TGCGAGTACCACCTGTCCCTGCTGGATGAAAAACGCCTGGTGTGTGGCCGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp CAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTGCCTGCCATTCCTCTGCTTCATCAACGAGGCTaGGGACATTTTCAAACACCC +
Preference number: 4 (lower is better)
Translates to: QFVGTSAGPLGSLPAIPLLHQRG*GHFQTP
Trigger: GGGTGTTTGAAAATGTCCCCAGCCTCGTTGATGAAG...CAGAGGAATGGCAGGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp GATCCTAACACTCGGCTTCCTCTCCACAGCTCCGGGCCTTGGGATCGATTGTGTCACAGAGACAGTTCGTaGGGACCTCAGCTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: DPNTRLPLHSSGPWDRLCHRDSS*GPQLGP
Trigger: GGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTG...ACACAATCGATCCCAAGGCCCGGAGCTGTGGAGAGGAAGCCGAGTGTTAGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp CTGCTGAGTTTGCAGCTCCTTATGAAGGTACGAAAGCCTGTTGGCCCCAACTTCTTCCCGGTGGGCGCGTaGAGGCCCCGGCAGCAGATC +
Preference number: 4 (lower is better)
Translates to: LLSLQLLMKVRKPVGPNFFPVGA*RPRQQI
Trigger: GATCTGCTGCCGGGGCCTCCACGCGCCCACCGGGAA...GAAGTTGGGGCCAACAGGCTTTCGTACCTTCATAAGGAGCTGCAAACTCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp GAGCACTGGTCAGCTCGCCGTCCAAAGCATCTTCCTTTCCAGCGAATGGTTTTTTCAGGCTTTTCCCGGTaGGCGCGTGGAGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: EHWSARRPKHLPFQRMVFSGFSR*ARGGPG
Trigger: GCCGGGGCCTCCACGCGCCCACCGGGAAAAGCCTGA...AAAAACCATTCGCTGGAAAGGAAGATGCTTTGGACGGCGAGCTGACCAGTGCTC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp GCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTGCCTGCATGTAGCACATGACTaGGATGGGAGATTCGCAGAT +
Preference number: 4 (lower is better)
Translates to: AHRDSSWGPQLGPSAACLHVAHD*DGRFAD
Trigger: ATCTGCGAATCTCCCATCCCAGTCATGTGCTACATG...CAGGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp CACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACACCCAAGCCTTACCTGGAAGCACGTaGGGCCCGGCCTCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: HREQTESLEVGPRFNTQALPGST*GPASPW
Trigger: CCACGGGGAGGCCGGGCCCCACGTGCTTCCAGGTAA...GGCTTGGGTGTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR CCA 90 bp TCGATAAGGAGAGGTTTGCAGATGTACTCCTGGACCACCGCTGGCCTGCTCTGGCACTGTCCCCTCCTCTaGCCATCCCACCCCGATCAC +
Preference number: 4 (lower is better)
Translates to: SIRRGLQMYSWTTAGLLWHCPLL*PSHPDH
Trigger: GTGATCGGGGTGGGATGGCCAGAGGAGGGGACAGTG...CCAGAGCAGGCCAGCGGTGGTCCAGGAGTACATCTGCAAACCTCTCCTTATCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487468.5
3UTR CAA 72 bp CCGATCACTCATCCTACACGAAGCCAGAGAGCCCTCTaGAGGCCGGTCAAGGCTGGAAACGCAGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: PITHPTRSQRAL*RPVKAGNAGWE
Trigger: TTCCCAGCCTGCGTTTCCAGCCTTGACCGGCCTCAAGAGGGCTCTCTGGCTTCGTGTAGGATGAGTGATCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487468.5
CDS-3UTR TCA 90 bp GTTGGGCCCAGGTTTAACACCCAAGCCCACAGCACCACCAACACTGTCCCCTCCTTGGGGGTGGGCTCCTaGTATGGCTCGGTACAAAAC +
Preference number: 4 (lower is better)
Translates to: VGPRFNTQAHSTTNTVPSLGVGS*YGSVQN
Trigger: GTTTTGTACCGAGCCATATCAGGAGCCCACCCCCAA...GGAGGGGACAGTGTTGGTGGTGCTGTGGGCTTGGGTGTTAAACCTGGGCCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR TCA 90 bp CACATCCCTGAGTCCCGCTGGTCCAGGGTCATGGAGTTCCACCTCCGTGTGATGCACTGTCCGAGTGGATaGAGTTGCCGCTGTGGATGT +
Preference number: 4 (lower is better)
Translates to: HIPESRWSRVMEFHLRVMHCPSG*SCRCGC
Trigger: ACATCCACAGCGGCAACTTCATCCACTCGGACAGTG...CATCACACGGAGGTGGAACTCCATGACCCTGGACCAGCGGGACTCAGGGATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp GTTGGGCCCAGGTTTAACACCCAAGCCCACAGCACCACCAACACTGTCCCCTCCCCCCGTGGGGATGTCTaGCTGGTAGAAGACTTTGAG +
Preference number: 4 (lower is better)
Translates to: VGPRFNTQAHSTTNTVPSPRGDV*LVEDFE
Trigger: CTCAAAGTCTTCTACCAGTCAGACATCCCCACGGGG...GGAGGGGACAGTGTTGGTGGTGCTGTGGGCTTGGGTGTTAAACCTGGGCCCAAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR TCA 90 bp GGTGAAGCACAGCTCAGCCGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGAGTTGGTGCTTCCTGTaGGCCCAGAATAGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: GEAQLSRTQRQFVGTSAGSWCFL*AQNRRC
Trigger: GCACCTTCTATTCTGGGCTCACAGGAAGCACCAACT...CCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCGGCTGAGCTGTGCTTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp GGAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGAGCGGGAGGGCAGATTaGGCGCGCGTGGGGCTCGTG +
Preference number: 4 (lower is better)
Translates to: GSSLPQITQGANRKLGSWSGRAD*ARVGLV
Trigger: CACGAGCCCCACGCGCGCTCAATCTGCCCTCCCGCT...CCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR TCA 90 bp AGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCGCGAGGCTGCCCACGTaGCCCTGCCTGTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: SSLPQITQGANRKLGSWAARLPT*PCLSQR
Trigger: CCTCTGTGACAGGCAGGGTCACGTGGGCAGCCTCGC...GGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR GCA 90 bp CCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACATGCCCCGCCGCATGGTaGTCAGGGCCGGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: PNHTGSKQKAWKLGPGLTCPAAW*SGPGPV
Trigger: CACTGGCCCCGGCCCTGAGCACCATGCGGCGGGGCA...TGTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR GCA 90 bp GGGGAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGCTCCTCCCCTGCCTTaGACTCCGGTTCCCCGGCCG +
Preference number: 4 (lower is better)
Translates to: GEVACPKSHREQTESLEVAPPLP*TPVPRP
Trigger: CGGCCGGGGAACCGGAGTGCAAGGCAGGGGAGGAGC...AACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR GCA 90 bp TCCACTTCCTTCTCTCGGAACGGGCGGCAGGAAATAAACACGATGTTCTCAGGCGCCAGGACCTTGGGCTaGTCCTCCCCTGCCTTGCAC +
Preference number: 4 (lower is better)
Translates to: STSFSRNGRQEINTMFSGARTLG*SSPALH
Trigger: GTGCAAGGCAGGGGAGGAGCAGCCCAAGGTCCTGGC...GCCTGAGAACATCGTGTTTATTTCCTGCCGCCCGTTCCGAGAGAAGGAAGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS-3UTR GCA 90 bp AGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCGGCCCGAGCTCCGCTTaGAGCTTCGGCCCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: SSLPQITQGANRKLGSWAGPSSA*SFGPCP
Trigger: GGGACAAGGGCCGAAGCTGCAAGCGGAGCTCGGGCC...GGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR GCA 90 bp CAGCTCCGGGCCTTGGGATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGCCTCTGCAGGCAGAATaGCTGGGGCGCTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: QLRALGSIVSCAPNTTDLPLQAE*LGRSSP
Trigger: AGGGCTGGAGCGCCCCAGGCATTCTGCCTGCAGAGG...CAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCCCAAGGCCCGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR GCA 90 bp CCACCGCTGGCCTGCTCTGGAGGGTCCCTGCCAGGCGGATGTCACTGGGGTCTTCAAATACAACAGATTTaGCCCAGTTGGTGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PPLACSGGSLPGGCHWGLQIQQI*PSWCFL
Trigger: CAGGAAGCACCAACTGGGGCAAATCTGTTGTATTTG...AAGACCCCAGTGACATCCGCCTGGCAGGGACCCTCCAGAGCAGGCCAGCGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS-3UTR GCA 90 bp CAGAGAGCCCTCTTGAGGCCGGTCAAGGCTGGAAACGCAGGCTGGGAACTGGCAAGAGGGGAAGTAGCTTaGCCCAAATCACACAGGGAG +
Preference number: 4 (lower is better)
Translates to: QRALLRPVKAGNAGWELARGEVA*PKSHRE
Trigger: CTCCCTGTGTGATTTGGGGCAAGCTACTTCCCCTCT...TGCCAGTTCCCAGCCTGCGTTTCCAGCCTTGACCGGCCTCAAGAGGGCTCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487468.5
CDS-3UTR CCA 90 bp TCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACACCCAACTTTGGCCGCCGCTTTaGCCGCAGCCACCGCCTCCG +
Preference number: 4 (lower is better)
Translates to: SHREQTESLEVGPRFNTQLWPPL*PQPPPP
Trigger: CGGAGGCGGTGGCTGCGGCCAAAGCGGCGGCCAAAG...TTGGGTGTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR CCA 90 bp GAGCACTGGTCAGCTCGCCGTCCAAAGCATCTTCCTTTCCAGCGAATGGTTTTTACGGTGACCGGCCGCTaGGAGCCGTTCTCGCCGGAA +
Preference number: 4 (lower is better)
Translates to: EHWSARRPKHLPFQRMVFTVTGR*EPFSPE
Trigger: TTCCGGCGAGAACGGCTCCCAGCGGCCGGTCACCGT...AAAAACCATTCGCTGGAAAGGAAGATGCTTTGGACGGCGAGCTGACCAGTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp TCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACACCCAAACCGCTGGCCTGCTCTaGAGGGTCCCTGCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: SHREQTESLEVGPRFNTQTAGLL*RVPARR
Trigger: CCGCCTGGCAGGGACCCTCCAGAGCAGGCCAGCGGT...TTGGGTGTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR CCA 90 bp CCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACACCGCTGGCCTGCTCTaGAGGGTCCCTGCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: PKSHREQTESLEVGPRFNTAGLL*RVPARR
Trigger: CCGCCTGGCAGGGACCCTCCAGAGCAGGCCAGCGGT...GTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR CCA 90 bp TTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTCTCCTGGACCACCGCTaGCCTGCTCTGGAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LPQITQGANRKLGSWAQVLLDHR*PALEGP
Trigger: GGGACCCTCCAGAGCAGGCCAGCGGTGGTCCAGGAG...AACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR CCA 90 bp AGGAGAGGTTTGCAGATGTACTCCTGGACCACCGCTGGCCTGCTCTGGAGGGTCCTAGCACTGTCCGAGTaGATGAAGTTGCCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: RRGLQMYSWTTAGLLWRVLALSE*MKLPLW
Trigger: CCACAGCGGCAACTTCATCCACTCGGACAGTGCTAG...GACCCTCCAGAGCAGGCCAGCGGTGGTCCAGGAGTACATCTGCAAACCTCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474723.5
ENST00000487468.5
CDS-3UTR CCA 90 bp GGTACTCGCAAAGGTCAATCAGTGAGGCCACCTGCTCATGAAGTGGCAGCATCTGGCCCGGCCTCCCCGTaGGGATGTCTGACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: GTRKGQSVRPPAHEVAASGPASP*GCLTGR
Trigger: TCTACCAGTCAGACATCCCCACGGGGAGGCCGGGCC...AGATGCTGCCACTTCATGAGCAGGTGGCCTCACTGATTGACCTTTGCGAGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp CGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTGCCTTCTTTTCTTCTTAAGTaGGTCCATGAGGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: RTQRQFVGTSAGPLGSLPSFLLK*VHEAQS
Trigger: ACTCTGCGCCTCATGGACCCACTTAAGAAGAAAAGA...AGGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp ATAAACACGATGTTCTCAGGCTTTTCCCGGTGGGCGCGTGGAGGCCCCGGCAGCGGTACGAAAGCCTGTTaGCCCCAACTTCATTGTCCC +
Preference number: 4 (lower is better)
Translates to: INTMFSGFSRWARGGPGSGTKAC*PQLHCP
Trigger: GGGACAATGAAGTTGGGGCCAACAGGCTTTCGTACC...GCTGCCGGGGCCTCCACGCGCCCACCGGGAAAAGCCTGAGAACATCGTGTTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp CCGTTTTCCAGGAGGACAGAGTGGCCCTCAGGACAGGGTATGTCTGGGATGGGACACAGCTCCGGGCCTTaGGATCGATTGTGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: PFSRRTEWPSGQGMSGMGHSSGP*DRLCPV
Trigger: CACAGGACACAATCGATCCCAAGGCCCGGAGCTGTG...TCCCATCCCAGACATACCCTGTCCTGAGGGCCACTCTGTCCTCCTGGAAAACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp GCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTGCCTGGGAAACTTGTTCACTTaGCCGGAGAATATGTCATTG +
Preference number: 4 (lower is better)
Translates to: AHRDSSWGPQLGPSAACLGNLFT*PENMSL
Trigger: CAATGACATATTCTCCGGTCAAGTGAACAAGTTTCC...CAGGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp GGTGAAGCACAGCTCAGCCGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCAGACCAGACCTTCTTaGTGTCAACGCCTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: GEAQLSRTQRQFVGTSAGQTRPS*CQRLWK
Trigger: CTTCCAAAGGCGTTGACATCAAGAAGGTCTGGTCTG...CCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCGGCTGAGCTGTGCTTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp GAACGGGCGGCAGGAAATAAACACGATGTTCTCAGGCTTTTCCCGGTGGGCGCGCCCCGTGGGGATGTCTaGCTGGTAGAAGACTTTGAG +
Preference number: 4 (lower is better)
Translates to: ERAAGNKHDVLRLFPVGAPRGDV*LVEDFE
Trigger: CTCAAAGTCTTCTACCAGTCAGACATCCCCACGGGG...CGCGCCCACCGGGAAAAGCCTGAGAACATCGTGTTTATTTCCTGCCGCCCGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp GGAAATAAACACGATGTTCTCAGGCTTTTCCCGGTGGGCGCGTGGAGGCCCCGGCCAGGCGCAGGTAGTTaGACTGTTTTGCGTACTTGG +
Preference number: 4 (lower is better)
Translates to: GNKHDVLRLFPVGAWRPRPGAGS*TVLRTW
Trigger: CCAAGTACGCAAAACAGTTCAACTACCTGCGCCTGG...CCGGGGCCTCCACGCGCCCACCGGGAAAAGCCTGAGAACATCGTGTTTATTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp GTGTCCTGTGCCCCAAATACAACAGATTTGCCCCAGTTGGTGCTTCCTGTGAGCCTGCAGACACATCCCTaGGTCCCGCTGGTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: VSCAPNTTDLPQLVLPVSLQTHP*VPLVQG
Trigger: ACCCTGGACCAGCGGGACTCAGGGATGTGTCTGCAG...GCTCACAGGAAGCACCAACTGGGGCAAATCTGTTGTATTTGGGGCACAGGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp TCAGCCGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCATCTTGAACTTCCTCTaGGCCAGGAAAAAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: SAAHRDSSWGPQLGPSAAILNFL*ARKKKA
Trigger: AGCTTTCTTTTTCCTGGCTCAGAGGAAGTTCAAGAT...GGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCGGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp CAGGCAGAATGCCTGGGGCGCTCCAGCCCTGAAAGCTGCTCTCGTCTTCCGTTTGCAAAGGTCAATCAGTaGGGCCACCTGCTCATGAAG +
Preference number: 4 (lower is better)
Translates to: QAECLGRSSPESCSRLPFAKVNQ*GHLLMK
Trigger: CTTCATGAGCAGGTGGCCTCACTGATTGACCTTTGC...AAACGGAAGACGAGAGCAGCTTTCAGGGCTGGAGCGCCCCAGGCATTCTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp CACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTGCCTGCCAATGTCATATGTCCGATaGCTGATGACTCAGAAACAG +
Preference number: 4 (lower is better)
Translates to: HRDSSWGPQLGPSAACLPMSYVR*LMTQKQ
Trigger: CTGTTTCTGAGTCATCAGTCATCGGACATATGACAT...TGGCAGGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp CAGATGTACTCCTGGACCACCGCTGGCCTGCTCTGGAGGGTCCCTGCCAGGCGGATGTCATATGTCCGATaGCTGATGACTCAGAAACAG +
Preference number: 4 (lower is better)
Translates to: QMYSWTTAGLLWRVPARRMSYVR*LMTQKQ
Trigger: CTGTTTCTGAGTCATCAGTCATCGGACATATGACAT...CCGCCTGGCAGGGACCCTCCAGAGCAGGCCAGCGGTGGTCCAGGAGTACATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS-3UTR GCA 90 bp GGAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGCCCGCCCGAGCCCGTTaGCATGATCGCTCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: GSSLPQITQGANRKLGSWPARAR*HDRSGS
Trigger: CGAGCCTGAGCGATCATGGCAACGGGCTCGGGCGGG...CCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR GCA 90 bp AATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACACCCAGTCCGCCACCAAACTaGCGCCGCTGCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: NHTGSKQKAWKLGPGLTPSPPPN*RRCSRC
Trigger: GCAGCGGCTGCAGCGGCGGCAGTTTGGTGGCGGACT...GGGTGTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR GCA 90 bp GGAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGTGCGGGCAGAGGCCCTaGACCGGCTTCGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: GSSLPQITQGANRKLGSWCGQRP*TGFGLD
Trigger: GTCCAAGCCGAAGCCGGTGCAGGGCCTCTGCCCGCA...CCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR GCA 90 bp AATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACACCCGGACCACCGCTGGCCTaGTCTGGAGGGTCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: NHTGSKQKAWKLGPGLTPGPPLA*SGGSLP
Trigger: TGGCAGGGACCCTCCAGAGCAGGCCAGCGGTGGTCC...GGGTGTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR GCA 90 bp AGAGTGGCCCTCAGGACAGGGTATGTCTGGGATGGGAGAGCTTATTGGCACAGCCTTCGGGGTTGGCGTTaGAGTCTGGAGCACTGGTCA +
Preference number: 4 (lower is better)
Translates to: RVALRTGYVWDGRAYWHSLRGWR*SLEHWS
Trigger: TGACCAGTGCTCCAGACTGCAACGCCAACCCCGAAG...GCTGTGCCAATAAGCTCTCCCATCCCAGACATACCCTGTCCTGAGGGCCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR GCA 90 bp CAGCCGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTTGGGAGATTCGCAGATaGCTACTTGATATTTCCACT +
Preference number: 4 (lower is better)
Translates to: QPHTETVRGDLSWAPRQPWEIRR*LLDIST
Trigger: AGTGGAAATATCAAGTAGGCATCTGCGAATCTCCCA...AGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp GGAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGACGGTGACCGGCCGCTaGGAGCCGTTCTCGCCGGAA +
Preference number: 4 (lower is better)
Translates to: GSSLPQITQGANRKLGSWTVTGR*EPFSPE
Trigger: TTCCGGCGAGAACGGCTCCCAGCGGCCGGTCACCGT...CCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR CCA 90 bp CTCTCGTCTTCCGTTTTCCAGGAGGACAGAGTGGCCCTCAGGACAGGGTATGTCTTGCAGATGTACTCCTaGACCACCGCTGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LSSSVFQEDRVALRTGYVLQMYS*TTAGLL
Trigger: GAGCAGGCCAGCGGTGGTCCAGGAGTACATCTGCAA...GACATACCCTGTCCTGAGGGCCACTCTGTCCTCCTGGAAAACGGAAGACGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS-3UTR CCA 90 bp GGGGGTGGGCTCCTGATATGGCTCGGTACAAAACCTAGAGAGTCCGTCTTTGGCTTGCAGATGTACTCCTaGACCACCGCTGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GGGLLIWLGTKPRESVFGLQMYS*TTAGLL
Trigger: GAGCAGGCCAGCGGTGGTCCAGGAGTACATCTGCAA...GCCAAAGACGGACTCTCTAGGTTTTGTACCGAGCCATATCAGGAGCCCACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474723.5
ENST00000487468.5
CDS-3UTR CCA 90 bp GAACGGGCGGCAGGAAATAAACACGATGTTCTCAGGCTTTTCCCGGTGGGCGCGTGCGGTGCAGGTTTTTaGGGGTGGGCTCCTGATATG +
Preference number: 4 (lower is better)
Translates to: ERAAGNKHDVLRLFPVGACGAGF*GWAPDM
Trigger: CATATCAGGAGCCCACCCCCAAAAACCTGCACCGCA...CGCGCCCACCGGGAAAAGCCTGAGAACATCGTGTTTATTTCCTGCCGCCCGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp TCGATAAGGAGAGGTTTGCAGATGTACTCCTGGACCACCGCTGGCCTGCTCTGGCAAATGGAAGGCAGGTaGGCTTCGGGGTTGGCGTTG +
Preference number: 4 (lower is better)
Translates to: SIRRGLQMYSWTTAGLLWQMEGR*ASGLAL
Trigger: CAACGCCAACCCCGAAGCCCACCTGCCTTCCATTTG...CCAGAGCAGGCCAGCGGTGGTCCAGGAGTACATCTGCAAACCTCTCCTTATCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS-3UTR CCA 90 bp GAGGACAGAGTGGCCCTCAGGACAGGGTATGTCTGGGATGGGAGAGCTTATTGGTCCAGGAGGACAGAGTaGCCCTCAGGACAGGGTATG +
Preference number: 4 (lower is better)
Translates to: EDRVALRTGYVWDGRAYWSRRTE*PSGQGM
Trigger: CATACCCTGTCCTGAGGGCCACTCTGTCCTCCTGGA...CCAATAAGCTCTCCCATCCCAGACATACCCTGTCCTGAGGGCCACTCTGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp GATCCTAACACTCGGCTTCCTCTCCACAGCTCCGGGCCTTGGGATCGATTGTGTTCCAGGAGGACAGAGTaGCCCTCAGGACAGGGTATG +
Preference number: 4 (lower is better)
Translates to: DPNTRLPLHSSGPWDRLCSRRTE*PSGQGM
Trigger: CATACCCTGTCCTGAGGGCCACTCTGTCCTCCTGGA...ACACAATCGATCCCAAGGCCCGGAGCTGTGGAGAGGAAGCCGAGTGTTAGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp CAGCTCCGGGCCTTGGGATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGCACAGAGACAGTTCGTaGGGACCTCAGCTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: QLRALGSIVSCAPNTTDLHRDSS*GPQLGP
Trigger: GGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTG...CAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCCCAAGGCCCGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp GGTAACAGAGGGGAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCACCCCGCGGATGCGCTaGATCTCGAGGGCGCAGAAC +
Preference number: 4 (lower is better)
Translates to: GNRGEVACPKSHREQTESTPRMR*ISRAQN
Trigger: GTTCTGCGCCCTCGAGATCCAGCGCATCCGCGGGGT...GCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCCCCTCTGTTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR CCA 90 bp TCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACACCCAATTACCTGGAAGCACGTaGGGCCCGGCCTCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: SHREQTESLEVGPRFNTQLPGST*GPASPW
Trigger: CCACGGGGAGGCCGGGCCCCACGTGCTTCCAGGTAA...TTGGGTGTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR CCA 90 bp GTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCCTGGCAATGGTTACCTaGAAGCACGTGGGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: VACPKSHREQTESLEVGPLAMVT*KHVGPG
Trigger: GCCGGGCCCCACGTGCTTCCAGGTAACCATTGCCAG...GGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
3UTR CAA 72 bp CGGCTTCCTCTCCACAGCTCCGGGCCTTGGGATCGATaGTGTCCTGTGCCCCAAATACAACAGATTTGCCCC +
Preference number: 4 (lower is better)
Translates to: RLPLHSSGPWDR*CPVPQIQQICP
Trigger: GGGGCAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCCCAAGGCCCGGAGCTGTGGAGAGGAAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp GGGGAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTCCGAGCCCGTTGCCATaGTCGCTCAGGCTCGGGTTG +
Preference number: 4 (lower is better)
Translates to: GEVACPKSHREQTESLEVPSPLP*SLRLGL
Trigger: CAACCCGAGCCTGAGCGATCATGGCAACGGGCTCGG...AACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR TCA 90 bp AGAGTGGCCCTCAGGACAGGGTATGTCTGGGATGGGAGAGCTTATTGGCACAGCTTGGGGGTGGGCTCCTaGTATGGCTCGGTACAAAAC +
Preference number: 4 (lower is better)
Translates to: RVALRTGYVWDGRAYWHSLGVGS*YGSVQN
Trigger: GTTTTGTACCGAGCCATATCAGGAGCCCACCCCCAA...GCTGTGCCAATAAGCTCTCCCATCCCAGACATACCCTGTCCTGAGGGCCACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp CAGGAAATAAACACGATGTTCTCAGGCTTTTCCCGGTGGGCGCGTGGAGGCCCCCCAGGCGCAGGTAGTTaGACTGTTTTGCGTACTTGG +
Preference number: 4 (lower is better)
Translates to: QEINTMFSGFSRWARGGPPGAGS*TVLRTW
Trigger: CCAAGTACGCAAAACAGTTCAACTACCTGCGCCTGG...GGGGCCTCCACGCGCCCACCGGGAAAAGCCTGAGAACATCGTGTTTATTTCCTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp TTCCTTCTCTCGGAACGGGCGGCAGGAAATAAACACGATGTTCTCAGGCTTTTCGGGGCGCTCCAGCCCTaGAAGCTGCTCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: FLLSERAAGNKHDVLRLFGALQP*KLLSSS
Trigger: GGAAGACGAGAGCAGCTTTCAGGGCTGGAGCGCCCC...GAAAAGCCTGAGAACATCGTGTTTATTTCCTGCCGCCCGTTCCGAGAGAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp GAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCGCTCAGGCTCGGGTTaGCAGCGGCAGTCACCGCAT +
Preference number: 4 (lower is better)
Translates to: EVACPKSHREQTESLEVGRSGSG*QRQSPH
Trigger: ATGCGGTGACTGCCGCTGTCAACCCGAGCCTGAGCG...CCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR GCA 90 bp GGAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCAGGACCTTGGGCTaGTCCTCCCCTGCCTTGCAC +
Preference number: 4 (lower is better)
Translates to: GSSLPQITQGANRKLGSWARTLG*SSPALH
Trigger: GTGCAAGGCAGGGGAGGAGCAGCCCAAGGTCCTGGC...CCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR GCA 90 bp GAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGGCTCTGGAGGGTCCCTaGCAGGCGGATGTCACTGGG +
Preference number: 4 (lower is better)
Translates to: EVACPKSHREQTESLEVGALEGP*QADVTG
Trigger: CCCAGTGACATCCGCCTGGCAGGGACCCTCCAGAGC...CCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR GCA 90 bp CAGCCGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTTTCAAACACCCTTCGTaGTCATGTTCGATTCTCATA +
Preference number: 4 (lower is better)
Translates to: QPHTETVRGDLSWAPRQPFKHPS*SCSILI
Trigger: TATGAGAATCGAACATGAGCACGAAGGGTGTTTGAA...AGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS-3UTR CCA 90 bp GAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCACCGTCTCCGCTGTaGCCTCGGCCTCAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: EVACPKSHREQTESLEVGPPSPL*PRPQLW
Trigger: CCAAAGCTGAGGCCGAGGCCACAGCGGAGACGGTGG...CCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR CCA 90 bp TTCTTAAGTGGGTCCATGAGGCGCAGAGTGTCTCTGATCACAGCCACTTTCACTCCACCGTCTCCGCTGTaGCCTCGGCCTCAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: FLSGSMRRRVSLITATFTPPSPL*PRPQLW
Trigger: CCAAAGCTGAGGCCGAGGCCACAGCGGAGACGGTGG...AGTGAAAGTGGCTGTGATCAGAGACACTCTGCGCCTCATGGACCCACTTAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS-3UTR CCA 90 bp GCTCTGGAGGGTCCCTGCCAGGCGGATGTCACTGGGGTCTTTAATGAGGTAGATTGCGGTGCAGGTTTTTaGGGGTGGGCTCCTGATATG +
Preference number: 4 (lower is better)
Translates to: ALEGPCQADVTGVFNEVDCGAGF*GWAPDM
Trigger: CATATCAGGAGCCCACCCCCAAAAACCTGCACCGCA...ATCTACCTCATTAAAGACCCCAGTGACATCCGCCTGGCAGGGACCCTCCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000474723.5
ENST00000487468.5
CDS-3UTR CCA 90 bp CCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACGGCCCGGCCTCCCCGTaGGGATGTCTGACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: PKSHREQTESLEVGPRFNGPASP*GCLTGR
Trigger: TCTACCAGTCAGACATCCCCACGGGGAGGCCGGGCC...GTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR CCA 90 bp AACAGAGGGGAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGGCCCGGCCTCCCCGTaGGGATGTCTGACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: NRGEVACPKSHREQTESLGPASP*GCLTGR
Trigger: TCTACCAGTCAGACATCCCCACGGGGAGGCCGGGCC...CAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCCCCTCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR CCA 90 bp GAAATAAACACGATGTTCTCAGGCTTTTCCCGGTGGGCGCGTGGAGGCCCCGGCAGGGTATGTCTGGGATaGGAGAGCTTATTGGCACAG +
Preference number: 4 (lower is better)
Translates to: EINTMFSGFSRWARGGPGRVCLG*ESLLAQ
Trigger: CTGTGCCAATAAGCTCTCCCATCCCAGACATACCCT...GCCGGGGCCTCCACGCGCCCACCGGGAAAAGCCTGAGAACATCGTGTTTATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp GGGGAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGCGCAGAACTCGGAGTaGCGAGGAGAAGCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GEVACPKSHREQTESLEVAQNSE*RGEAGG
Trigger: CCCTCCCGCTTCTCCTCGCCACTCCGAGTTCTGCGC...AACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR TCA 90 bp GAACGGGCGGCAGGAAATAAACACGATGTTCTCAGGCTTTTCCCGGTGGGCGCGCAGACCAGACCTTCTTaGTGTCAACGCCTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: ERAAGNKHDVLRLFPVGAQTRPS*CQRLWK
Trigger: CTTCCAAAGGCGTTGACATCAAGAAGGTCTGGTCTG...CGCGCCCACCGGGAAAAGCCTGAGAACATCGTGTTTATTTCCTGCCGCCCGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR GCA 90 bp CAGCTCCGGGCCTTGGGATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGCTTCGGGGTTGGCGTTaGAGTCTGGAGCACTGGTCA +
Preference number: 4 (lower is better)
Translates to: QLRALGSIVSCAPNTTDLLRGWR*SLEHWS
Trigger: TGACCAGTGCTCCAGACTGCAACGCCAACCCCGAAG...CAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCCCAAGGCCCGGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR GCA 90 bp AGTCTGGAGCACTGGTCAGCTCGCCGTCCAAAGCATCTTCCTTTCCAGCGAATGGCTTCTACGAAGGCCTaGAGACACATCCCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: SLEHWSARRPKHLPFQRMASTKA*RHIPES
Trigger: GGACTCAGGGATGTGTCTGCAGGCCTTCGTAGAAGC...CATTCGCTGGAAAGGAAGATGCTTTGGACGGCGAGCTGACCAGTGCTCCAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR GCA 90 bp GCAGATGCCTACTTGATATTTCCACTTCCTTCTCTCGGAACGGGCGGCAGGAAATGCCTGCCATTCCTCTaGAGGCAGAATGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: ADAYLIFPLPSLGTGGRKCLPFL*RQNAWG
Trigger: GCCCCAGGCATTCTGCCTGCAGAGGAATGGCAGGCA...TTTCCTGCCGCCCGTTCCGAGAGAAGGAAGTGGAAATATCAAGTAGGCATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp CCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACATTCTCGCCGGAACCGTaGCCCGAGCTCCGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: PNHTGSKQKAWKLGPGLTFSPEP*PELRLQ
Trigger: CTGCAAGCGGAGCTCGGGCCACGGTTCCGGCGAGAA...TGTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR CCA 90 bp GTTGGGCCCAGGTTTAACACCCAAGCCCACAGCACCACCAACACTGTCCCCTCCCATCTCCGTCATGCCTaGAAACTTGTTCACTTGACC +
Preference number: 4 (lower is better)
Translates to: VGPRFNTQAHSTTNTVPSHLRHA*KLVHLT
Trigger: GGTCAAGTGAACAAGTTTCCAGGCATGACGGAGATG...GGAGGGGACAGTGTTGGTGGTGCTGTGGGCTTGGGTGTTAAACCTGGGCCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR CCA 90 bp CAGGAAATAAACACGATGTTCTCAGGCTTTTCCCGGTGGGCGCGTGGAGGCCCCGGTGGGCTCCTGATATaGCTCGGTACAAAACCTAGA +
Preference number: 4 (lower is better)
Translates to: QEINTMFSGFSRWARGGPGGLLI*LGTKPR
Trigger: TCTAGGTTTTGTACCGAGCCATATCAGGAGCCCACC...GGGGCCTCCACGCGCCCACCGGGAAAAGCCTGAGAACATCGTGTTTATTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp GGGCCTTGGGATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGCCCCAGTGCAGGTTTTTGGGGGTaGGCTCCTGATATGGCTCGG +
Preference number: 4 (lower is better)
Translates to: GPWDRLCPVPQIQQICPSAGFWG*APDMAR
Trigger: CCGAGCCATATCAGGAGCCCACCCCCAAAAACCTGC...ACTGGGGCAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCCCAAGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp CTCTCGTCTTCCGTTTTCCAGGAGGACAGAGTGGCCCTCAGGACAGGGTATGTCGAAGACTTTGAGCTCTaGAGTCAGCGCGATGACCGT +
Preference number: 4 (lower is better)
Translates to: LSSSVFQEDRVALRTGYVEDFEL*SQRDDR
Trigger: ACGGTCATCGCGCTGACTCCAGAGCTCAAAGTCTTC...GACATACCCTGTCCTGAGGGCCACTCTGTCCTCCTGGAAAACGGAAGACGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp CAGTCTGGAGCACTGGTCAGCTCGCCGTCCAAAGCATCTTCCTTTCCAGCGAATTCAAAGCCTAAAATCTaGAAGCACGTGGGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: QSGALVSSPSKASSFPANSKPKI*KHVGPG
Trigger: GCCGGGCCCCACGTGCTTCCAGATTTTAGGCTTTGA...ATTCGCTGGAAAGGAAGATGCTTTGGACGGCGAGCTGACCAGTGCTCCAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp GGGCTTCGGGGTTGGCGTTGCAGTCTGGAGCACTGGTCAGCTCGCCGTCCAAAGTTCCTTTCCAGCGAATaGTTTTTCAAGCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: GLRGWRCSLEHWSARRPKFLSSE*FFKLLR
Trigger: TCTCAGCAGCTTGAAAAACCATTCGCTGGAAAGGAA...CTTTGGACGGCGAGCTGACCAGTGCTCCAGACTGCAACGCCAACCCCGAAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp GCTGCTGCTGAGTTTGCAGCTCCTTATGAAGGTACGAAAGCCTGTTGGCCCCAATGCAGTCTGGAGCACTaGTCAGCTCGCCGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: AAAEFAAPYEGTKACWPQCSLEH*SARRPK
Trigger: CTTTGGACGGCGAGCTGACCAGTGCTCCAGACTGCA...TTGGGGCCAACAGGCTTTCGTACCTTCATAAGGAGCTGCAAACTCAGCAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp GCTGCTGAGTTTGCAGCTCCTTATGAAGGTACGAAAGCCTGTTGGCCCCAACTTTGCAGGCAGAATGCCTaGGGCGCTCCAGCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: AAEFAAPYEGTKACWPQLCRQNA*GAPALK
Trigger: TTTCAGGGCTGGAGCGCCCCAGGCATTCTGCCTGCA...AAGTTGGGGCCAACAGGCTTTCGTACCTTCATAAGGAGCTGCAAACTCAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp GAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCAGCGGCGGCCATGTTaGAAGAGGGCAAAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: EVACPKSHREQTESLEVGQRRPC*KRAKSR
Trigger: GCGGCTCTTTGCCCTCTTCCAACATGGCCGCCGCTG...CCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR TCA 90 bp GCCCTCTTGAGGCCGGTCAAGGCTGGAAACGCAGGCTGGGAACTGGCAATGGTTAGGGGTCTAAGGACTTaGGTAAGACATACAGACGAA +
Preference number: 4 (lower is better)
Translates to: ALLRPVKAGNAGWELAMVRGLRT*VRHTDE
Trigger: TTCGTCTGTATGTCTTACTCAAGTCCTTAGACCCCT...AACCATTGCCAGTTCCCAGCCTGCGTTTCCAGCCTTGACCGGCCTCAAGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487468.5
CDS-3UTR GCA 90 bp CGGGCCTTGGGATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGCCCCAGTCCAGCCCTGAAAGCTaGTCTCGTCTTCCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: RALGSIVSCAPNTTDLPQSSPES*SRLPFS
Trigger: GGAAAACGGAAGACGAGAGCAGCTTTCAGGGCTGGA...CTGGGGCAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCCCAAGGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR GCA 90 bp AGTCTGGAGCACTGGTCAGCTCGCCGTCCAAAGCATCTTCCTTTCCAGCGAATGTCCAGCCCTGAAAGCTaGTCTCGTCTTCCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: SLEHWSARRPKHLPFQRMSSPES*SRLPFS
Trigger: GGAAAACGGAAGACGAGAGCAGCTTTCAGGGCTGGA...CATTCGCTGGAAAGGAAGATGCTTTGGACGGCGAGCTGACCAGTGCTCCAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp CGGGCCTTGGGATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGCCCCAGTCCTTCCACTTGAGCTaGCGGATGCTGATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RALGSIVSCAPNTTDLPQSFHLS*RMLIFR
Trigger: CCTGAAGATCAGCATCCGCCAGCTCAAGTGGAAGGA...CTGGGGCAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCCCAAGGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp TCCACTTCCTTCTCTCGGAACGGGCGGCAGGAAATAAACACGATGTTCTCAGGCCAAGCGCCGGCCAAATaGGAACTCCTTCCACTTGAG +
Preference number: 4 (lower is better)
Translates to: STSFSRNGRQEINTMFSGQAPAK*ELLPLE
Trigger: CTCAAGTGGAAGGAGTTCCCATTTGGCCGGCGCTTG...GCCTGAGAACATCGTGTTTATTTCCTGCCGCCCGTTCCGAGAGAAGGAAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp TTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTGCAGGTTTTTGGGGGTaGGCTCCTGATATGGCTCGG +
Preference number: 4 (lower is better)
Translates to: LPQITQGANRKLGSWAQVAGFWG*APDMAR
Trigger: CCGAGCCATATCAGGAGCCCACCCCCAAAAACCTGC...AACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR CCA 90 bp CATGACTGGGATGGGAGATTCGCAGATGCCTACTTGATATTTCCACTTCCTTCTGGCCCGGCCTCCCCGTaGGGATGTCTGACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: HDWDGRFADAYLIFPLPSGPASP*GCLTGR
Trigger: TCTACCAGTCAGACATCCCCACGGGGAGGCCGGGCC...AGAAGGAAGTGGAAATATCAAGTAGGCATCTGCGAATCTCCCATCCCAGTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR CAA 72 bp GCACATGACTGGGATGGGAGATTCGCAGATGCCTACTaGATATTTCCACTTCCTTCTCTCGGAACGGGCGGC +
Preference number: 4 (lower is better)
Translates to: AHDWDGRFADAY*IFPLPSLGTGG
Trigger: GCCGCCCGTTCCGAGAGAAGGAAGTGGAAATATCAAGTAGGCATCTGCGAATCTCCCATCCCAGTCATGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321582.10
ENST00000373778.5
ENST00000474723.5
3UTR CAA 72 bp GCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTaGGAAGTTGGGCCCAGGTTTAACACCCAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: ACPKSHREQTES*EVGPRFNTQAH
Trigger: GTGGGCTTGGGTGTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR TCA 90 bp GTTGGGCCCAGGTTTAACACCCAAGCCCACAGCACCACCAACACTGTCCCCTCCGTCATTGTCGTGAAATaGAACTCCATGCCAGTAGAT +
Preference number: 4 (lower is better)
Translates to: VGPRFNTQAHSTTNTVPSVIVVK*NSMPVD
Trigger: ATCTACTGGCATGGAGTTTCATTTCACGACAATGAC...GGAGGGGACAGTGTTGGTGGTGCTGTGGGCTTGGGTGTTAAACCTGGGCCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR TCA 90 bp AGGAGAGGTTTGCAGATGTACTCCTGGACCACCGCTGGCCTGCTCTGGAGGGTCGGAAACTTGTTCACTTaGCCGGAGAATATGTCATTG +
Preference number: 4 (lower is better)
Translates to: RRGLQMYSWTTAGLLWRVGNLFT*PENMSL
Trigger: CAATGACATATTCTCCGGTCAAGTGAACAAGTTTCC...GACCCTCCAGAGCAGGCCAGCGGTGGTCCAGGAGTACATCTGCAAACCTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474723.5
ENST00000487468.5
CDS-3UTR TCA 90 bp GCCCTCTTGAGGCCGGTCAAGGCTGGAAACGCAGGCTGGGAACTGGCAATGGTTGGAAACTTGTTCACTTaGCCGGAGAATATGTCATTG +
Preference number: 4 (lower is better)
Translates to: ALLRPVKAGNAGWELAMVGNLFT*PENMSL
Trigger: CAATGACATATTCTCCGGTCAAGTGAACAAGTTTCC...AACCATTGCCAGTTCCCAGCCTGCGTTTCCAGCCTTGACCGGCCTCAAGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487468.5
CDS-3UTR TCA 90 bp TGTCCGATGACTGATGACTCAGAAACAGGGTGTATCACCAGGAGGTGTGAGGAGTTGGGGGTGGGCTCCTaGTATGGCTCGGTACAAAAC +
Preference number: 4 (lower is better)
Translates to: CPMTDDSETGCITRRCEELGVGS*YGSVQN
Trigger: GTTTTGTACCGAGCCATATCAGGAGCCCACCCCCAA...CTCCTCACACCTCCTGGTGATACACCCTGTTTCTGAGTCATCAGTCATCGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp TCCACTTCCTTCTCTCGGAACGGGCGGCAGGAAATAAACACGATGTTCTCAGGCACTGGTAGAAGACTTTaGGCTCTGGAGTCAGCGCGA +
Preference number: 4 (lower is better)
Translates to: STSFSRNGRQEINTMFSGTGRRL*ALESAR
Trigger: TCGCGCTGACTCCAGAGCTCAAAGTCTTCTACCAGT...GCCTGAGAACATCGTGTTTATTTCCTGCCGCCCGTTCCGAGAGAAGGAAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp ATCAAACTTGAGCTTGTCGATAAGGAGAGGTTTGCAGATGTACTCCTGGACCACGCCAGAGAGCCCTCTTaGGGCCGGTCAAGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: IKLELVDKERFADVLLDHAREPS*GRSRLE
Trigger: TTCCAGCCTTGACCGGCCTCAAGAGGGCTCTCTGGC...GTGGTCCAGGAGTACATCTGCAAACCTCTCCTTATCGACAAGCTCAAGTTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487468.5
CDS-3UTR GCA 90 bp AGTCTGGAGCACTGGTCAGCTCGCCGTCCAAAGCATCTTCCTTTCCAGCGAATGTACTTGGGGAACACCTaGTTGAGGCAAATGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SLEHWSARRPKHLPFQRMYLGNT*LRQMEG
Trigger: GCCTTCCATTTGCCTCAAGCAGGTGTTCCCCAAGTA...CATTCGCTGGAAAGGAAGATGCTTTGGACGGCGAGCTGACCAGTGCTCCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR GCA 90 bp GCCTTGGGATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGCCCCAGTTGGCTTCTACGAAGGCCTaGAGACACATCCCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: ALGSIVSCAPNTTDLPQLASTKA*RHIPES
Trigger: GGACTCAGGGATGTGTCTGCAGGCCTTCGTAGAAGC...CAACTGGGGCAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp GAGGACAGAGTGGCCCTCAGGACAGGGTATGTCTGGGATGGGAGAGCTTATTGGCATCTCCGTCATGCCTaGAAACTTGTTCACTTGACC +
Preference number: 4 (lower is better)
Translates to: EDRVALRTGYVWDGRAYWHLRHA*KLVHLT
Trigger: GGTCAAGTGAACAAGTTTCCAGGCATGACGGAGATG...CCAATAAGCTCTCCCATCCCAGACATACCCTGTCCTGAGGGCCACTCTGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373778.5
CDS-3UTR CCA 90 bp CAGACGAATATCAAACTTGAGCTTGTCGATAAGGAGAGGTTTGCAGATGTACTCCTCCTGGACCACCGCTaGCCTGCTCTGGAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: QTNIKLELVDKERFADVLLLDHR*PALEGP
Trigger: GGGACCCTCCAGAGCAGGCCAGCGGTGGTCCAGGAG...GAGTACATCTGCAAACCTCTCCTTATCGACAAGCTCAAGTTTGATATTCGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474723.5
ENST00000487468.5
CDS-3UTR CCA 90 bp GAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGTTGCAGATGTACTCCTaGACCACCGCTGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: EVACPKSHREQTESLEVGLQMYS*TTAGLL
Trigger: GAGCAGGCCAGCGGTGGTCCAGGAGTACATCTGCAA...CCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR CCA 90 bp TTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTCTAGCACTGTCCGAGTaGATGAAGTTGCCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LPQITQGANRKLGSWAQVLALSE*MKLPLW
Trigger: CCACAGCGGCAACTTCATCCACTCGGACAGTGCTAG...AACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR CCA 90 bp ATTTGCCATCCTGTCCACCAGGCGCAGGTAGTTGAACTGTTTTGCGTACTTGGGCTAGCACTGTCCGAGTaGATGAAGTTGCCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: ICHPVHQAQVVELFCVLGLALSE*MKLPLW
Trigger: CCACAGCGGCAACTTCATCCACTCGGACAGTGCTAG...CCCAAGTACGCAAAACAGTTCAACTACCTGCGCCTGGTGGACAGGATGGCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp CAGCTCCGGGCCTTGGGATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGGAAGACTTTGAGCTCTaGAGTCAGCGCGATGACCGT +
Preference number: 4 (lower is better)
Translates to: QLRALGSIVSCAPNTTDLEDFEL*SQRDDR
Trigger: ACGGTCATCGCGCTGACTCCAGAGCTCAAAGTCTTC...CAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCCCAAGGCCCGGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp CATGACTGGGATGGGAGATTCGCAGATGCCTACTTGATATTTCCACTTCCTTCTGGTGGGCTTCGGGGTTaGCGTTGCAGTCTGGAGCAC +
Preference number: 4 (lower is better)
Translates to: HDWDGRFADAYLIFPLPSGGLRG*RCSLEH
Trigger: GTGCTCCAGACTGCAACGCCAACCCCGAAGCCCACC...AGAAGGAAGTGGAAATATCAAGTAGGCATCTGCGAATCTCCCATCCCAGTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp TTCTTAAGTGGGTCCATGAGGCGCAGAGTGTCTCTGATCACAGCCACTTTCACTATCCCTGAGTCCCGCTaGTCCAGGGTCATGGAGTTC +
Preference number: 4 (lower is better)
Translates to: FLSGSMRRRVSLITATFTIPESR*SRVMEF
Trigger: GAACTCCATGACCCTGGACCAGCGGGACTCAGGGAT...AGTGAAAGTGGCTGTGATCAGAGACACTCTGCGCCTCATGGACCCACTTAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp TACACCCATGTAGCACATGACTGGGATGGGAGATTCGCAGATGCCTACTTGATATGCAGGCAGAATGCCTaGGGCGCTCCAGCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: YTHVAHDWDGRFADAYLICRQNA*GAPALK
Trigger: TTTCAGGGCTGGAGCGCCCCAGGCATTCTGCCTGCA...TATCAAGTAGGCATCTGCGAATCTCCCATCCCAGTCATGTGCTACATGGGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR CAA 72 bp CCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTaGGGCCCAGGTTTAACACCCAAGCCCACAGCACCA +
Preference number: 4 (lower is better)
Translates to: PNHTGSKQKAWK*GPGLTPKPTAP
Trigger: TGGTGCTGTGGGCTTGGGTGTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR TCA 90 bp GTTGGGCCCAGGTTTAACACCCAAGCCCACAGCACCACCAACACTGTCCCCTCCAATATGTCATTGTCGTaGAATGAAACTCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: VGPRFNTQAHSTTNTVPSNMSLS*NETPCQ
Trigger: CTGGCATGGAGTTTCATTTCACGACAATGACATATT...GGAGGGGACAGTGTTGGTGGTGCTGTGGGCTTGGGTGTTAAACCTGGGCCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR TCA 90 bp AATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACACCCCACTGTCCGAGTGGATaGAGTTGCCGCTGTGGATGT +
Preference number: 4 (lower is better)
Translates to: NHTGSKQKAWKLGPGLTPHCPSG*SCRCGC
Trigger: ACATCCACAGCGGCAACTTCATCCACTCGGACAGTG...GGGTGTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR TCA 90 bp GGTAACAGAGGGGAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCACTGGTAGAAGACTTTaGGCTCTGGAGTCAGCGCGA +
Preference number: 4 (lower is better)
Translates to: GNRGEVACPKSHREQTESTGRRL*ALESAR
Trigger: TCGCGCTGACTCCAGAGCTCAAAGTCTTCTACCAGT...GCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCCCCTCTGTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR TCA 90 bp CGCGATGACCGTCTTAATCACCACGGAGATGATGTCAGACCAGACCTTCTTGATCACCCATGTAGCACATaGCTGGGATGGGAGATTCGC +
Preference number: 4 (lower is better)
Translates to: RDDRLNHHGDDVRPDLLDHPCST*LGWEIR
Trigger: GCGAATCTCCCATCCCAGTCATGTGCTACATGGGTG...ATCAAGAAGGTCTGGTCTGACATCATCTCCGTGGTGATTAAGACGGTCATCGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR GCA 90 bp CAGGGTCATGGAGTTCCACCTCCGTGTGATGTCAATGTAGAGGATGTCCACGGCGCACCATCTCCGTCATaGCTGGAAACTTGTTCACTT +
Preference number: 4 (lower is better)
Translates to: QGHGVPPPCDVNVEDVHGAPSPS*LETCSL
Trigger: AAGTGAACAAGTTTCCAGGCATGACGGAGATGGTGC...GCCGTGGACATCCTCTACATTGACATCACACGGAGGTGGAACTCCATGACCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373778.5
CDS-3UTR GCA 90 bp AGGAGAGGTTTGCAGATGTACTCCTGGACCACCGCTGGCCTGCTCTGGAGGGTCATCGATTGTGTCCTGTaGCCCAAATACAACAGATTT +
Preference number: 4 (lower is better)
Translates to: RRGLQMYSWTTAGLLWRVIDCVL*PKYNRF
Trigger: AAATCTGTTGTATTTGGGGCACAGGACACAATCGAT...GACCCTCCAGAGCAGGCCAGCGGTGGTCCAGGAGTACATCTGCAAACCTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS-3UTR CCA 90 bp TTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTCCTTCCACTTGAGCTaGCGGATGCTGATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LPQITQGANRKLGSWAQVSFHLS*RMLIFR
Trigger: CCTGAAGATCAGCATCCGCCAGCTCAAGTGGAAGGA...AACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR CCA 90 bp GCAGATGCCTACTTGATATTTCCACTTCCTTCTCTCGGAACGGGCGGCAGGAAATCCTTCCACTTGAGCTaGCGGATGCTGATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: ADAYLIFPLPSLGTGGRKSFHLS*RMLIFR
Trigger: CCTGAAGATCAGCATCCGCCAGCTCAAGTGGAAGGA...TTTCCTGCCGCCCGTTCCGAGAGAAGGAAGTGGAAATATCAAGTAGGCATCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp TCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACACCCAACAAGCGCCGGCCAAATaGGAACTCCTTCCACTTGAG +
Preference number: 4 (lower is better)
Translates to: SHREQTESLEVGPRFNTQQAPAK*ELLPLE
Trigger: CTCAAGTGGAAGGAGTTCCCATTTGGCCGGCGCTTG...TTGGGTGTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR CCA 90 bp CGCGATGACCGTCTTAATCACCACGGAGATGATGTCAGACCAGACCTTCTTGATCAAGCGCCGGCCAAATaGGAACTCCTTCCACTTGAG +
Preference number: 4 (lower is better)
Translates to: RDDRLNHHGDDVRPDLLDQAPAK*ELLPLE
Trigger: CTCAAGTGGAAGGAGTTCCCATTTGGCCGGCGCTTG...ATCAAGAAGGTCTGGTCTGACATCATCTCCGTGGTGATTAAGACGGTCATCGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373778.5
ENST00000474723.5
ENST00000487468.5
CDS-3UTR CCA 90 bp GATGTCACTGGGGTCTTTAATGAGGTAGATTCCATCACCCTGACAACCACCATCGCAGGTTTTTGGGGGTaGGCTCCTGATATGGCTCGG +
Preference number: 4 (lower is better)
Translates to: DVTGVFNEVDSITLTTTIAGFWG*APDMAR
Trigger: CCGAGCCATATCAGGAGCCCACCCCCAAAAACCTGC...GATGGTGGTTGTCAGGGTGATGGAATCTACCTCATTAAAGACCCCAGTGACATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000474723.5
ENST00000487468.5
CDS-3UTR CCA 90 bp GGGGAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTTGCGGTGCAGGTTTTTaGGGGTGGGCTCCTGATATG +
Preference number: 4 (lower is better)
Translates to: GEVACPKSHREQTESLEVCGAGF*GWAPDM
Trigger: CATATCAGGAGCCCACCCCCAAAAACCTGCACCGCA...AACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR CCA 90 bp TTCCTTCTCTCGGAACGGGCGGCAGGAAATAAACACGATGTTCTCAGGCTTTTCCTAGCACTGTCCGAGTaGATGAAGTTGCCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: FLLSERAAGNKHDVLRLFLALSE*MKLPLW
Trigger: CCACAGCGGCAACTTCATCCACTCGGACAGTGCTAG...GAAAAGCCTGAGAACATCGTGTTTATTTCCTGCCGCCCGTTCCGAGAGAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp GGGCTTCGGGGTTGGCGTTGCAGTCTGGAGCACTGGTCAGCTCGCCGTCCAAAGGTTCGATTCTCATACTaGGATTTGCATTTACTTCAA +
Preference number: 4 (lower is better)
Translates to: GLRGWRCSLEHWSARRPKVRFSY*DLHLLQ
Trigger: TTGAAGTAAATGCAAATCCCAGTATGAGAATCGAAC...CTTTGGACGGCGAGCTGACCAGTGCTCCAGACTGCAACGCCAACCCCGAAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp CGGGCCTTGGGATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGCCCCAGCTTCATCAACGAGGCTaGGGACATTTTCAAACACCC +
Preference number: 4 (lower is better)
Translates to: RALGSIVSCAPNTTDLPQLHQRG*GHFQTP
Trigger: GGGTGTTTGAAAATGTCCCCAGCCTCGTTGATGAAG...CTGGGGCAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCCCAAGGCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp TCGATAAGGAGAGGTTTGCAGATGTACTCCTGGACCACCGCTGGCCTGCTCTGGTCTTTTCTTCTTAAGTaGGTCCATGAGGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: SIRRGLQMYSWTTAGLLWSFLLK*VHEAQS
Trigger: ACTCTGCGCCTCATGGACCCACTTAAGAAGAAAAGA...CCAGAGCAGGCCAGCGGTGGTCCAGGAGTACATCTGCAAACCTCTCCTTATCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS-3UTR CCA 90 bp CCCTGGAGAAAGTTCGTGCTCATGTTCGATTCTCATACTGGGATTTGCATTTACGGTGGGCTTCGGGGTTaGCGTTGCAGTCTGGAGCAC +
Preference number: 4 (lower is better)
Translates to: PWRKFVLMFDSHTGICIYGGLRG*RCSLEH
Trigger: GTGCTCCAGACTGCAACGCCAACCCCGAAGCCCACC...GTAAATGCAAATCCCAGTATGAGAATCGAACATGAGCACGAACTTTCTCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373778.5
CDS-3UTR CCA 90 bp GCCTTGGGATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGCCCCAGTTGTCCAGCAGGGACAGGTaGTACTCGCAAAGGTCAATC +
Preference number: 4 (lower is better)
Translates to: ALGSIVSCAPNTTDLPQLSSRDR*YSQRSI
Trigger: GATTGACCTTTGCGAGTACCACCTGTCCCTGCTGGA...CAACTGGGGCAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCCCAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp CCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACACGCAGGCTGGGAACTaGCAATGGTTACCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: PKSHREQTESLEVGPRFNTQAGN*QWLPGS
Trigger: GCTTCCAGGTAACCATTGCCAGTTCCCAGCCTGCGT...GTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR CCA 90 bp AATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACACCCGCTGGAAACGCAGGCTaGGAACTGGCAATGGTTACC +
Preference number: 4 (lower is better)
Translates to: NHTGSKQKAWKLGPGLTPAGNAG*ELAMVT
Trigger: GGTAACCATTGCCAGTTCCCAGCCTGCGTTTCCAGC...GGGTGTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR TCA 90 bp CAGGGTCATGGAGTTCCACCTCCGTGTGATGTCAATGTAGAGGATGTCCACGGCAGGGGTCTAAGGACTTaGGTAAGACATACAGACGAA +
Preference number: 4 (lower is better)
Translates to: QGHGVPPPCDVNVEDVHGRGLRT*VRHTDE
Trigger: TTCGTCTGTATGTCTTACTCAAGTCCTTAGACCCCT...GCCGTGGACATCCTCTACATTGACATCACACGGAGGTGGAACTCCATGACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp GGTAACAGAGGGGAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCCAGACCAGACCTTCTTaGTGTCAACGCCTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: GNRGEVACPKSHREQTESQTRPS*CQRLWK
Trigger: CTTCCAAAGGCGTTGACATCAAGAAGGTCTGGTCTG...GCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCCCCTCTGTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR TCA 90 bp AACAGAGGGGAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGACTGGTAGAAGACTTTaGGCTCTGGAGTCAGCGCGA +
Preference number: 4 (lower is better)
Translates to: NRGEVACPKSHREQTESLTGRRL*ALESAR
Trigger: TCGCGCTGACTCCAGAGCTCAAAGTCTTCTACCAGT...CAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCCCCTCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR TCA 90 bp CTGGGATGGGAGATTCGCAGATGCCTACTTGATATTTCCACTTCCTTCTCTCGGGCAAAGGTCAATCAGTaGGGCCACCTGCTCATGAAG +
Preference number: 4 (lower is better)
Translates to: LGWEIRRCLLDISTSFSRAKVNQ*GHLLMK
Trigger: CTTCATGAGCAGGTGGCCTCACTGATTGACCTTTGC...CCGAGAGAAGGAAGTGGAAATATCAAGTAGGCATCTGCGAATCTCCCATCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp GATAGGTATTCTTCATTTCATTTTACAGGTAACAGAGGGGAAGTAGCTTGCCCCGCCAGAGAGCCCTCTTaGGGCCGGTCAAGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: DRYSSFHFTGNRGEVACPAREPS*GRSRLE
Trigger: TTCCAGCCTTGACCGGCCTCAAGAGGGCTCTCTGGC...GGGGCAAGCTACTTCCCCTCTGTTACCTGTAAAATGAAATGAAGAATACCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR GCA 90 bp GTAGAAGACTTTGAGCTCTGGAGTCAGCGCGATGACCGTCTTAATCACCACGGATACTTGGGGAACACCTaGTTGAGGCAAATGGAAGGC +
Preference number: 4 (lower is better)
Translates to: VEDFELWSQRDDRLNHHGYLGNT*LRQMEG
Trigger: GCCTTCCATTTGCCTCAAGCAGGTGTTCCCCAAGTA...TCCGTGGTGATTAAGACGGTCATCGCGCTGACTCCAGAGCTCAAAGTCTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR GCA 90 bp GAGGACAGAGTGGCCCTCAGGACAGGGTATGTCTGGGATGGGAGAGCTTATTGGTGGGAGATTCGCAGATaGCTACTTGATATTTCCACT +
Preference number: 4 (lower is better)
Translates to: EDRVALRTGYVWDGRAYWWEIRR*LLDIST
Trigger: AGTGGAAATATCAAGTAGGCATCTGCGAATCTCCCA...CCAATAAGCTCTCCCATCCCAGACATACCCTGTCCTGAGGGCCACTCTGTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR GCA 90 bp GGGGAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTAGAGGGGAAGTAGCTTaGCCCAAATCACACAGGGAG +
Preference number: 4 (lower is better)
Translates to: GEVACPKSHREQTESLEVRGEVA*PKSHRE
Trigger: CTCCCTGTGTGATTTGGGGCAAGCTACTTCCCCTCT...AACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR CCA 90 bp GGTAACAGAGGGGAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCGGTGGGCTCCTGATATaGCTCGGTACAAAACCTAGA +
Preference number: 4 (lower is better)
Translates to: GNRGEVACPKSHREQTESGGLLI*LGTKPR
Trigger: TCTAGGTTTTGTACCGAGCCATATCAGGAGCCCACC...GCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCCCCTCTGTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR CCA 90 bp AATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACACCCGAAGACTTTGAGCTCTaGAGTCAGCGCGATGACCGT +
Preference number: 4 (lower is better)
Translates to: NHTGSKQKAWKLGPGLTPEDFEL*SQRDDR
Trigger: ACGGTCATCGCGCTGACTCCAGAGCTCAAAGTCTTC...GGGTGTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR CCA 90 bp TCAACGCCTTTGGAAGACAGTCTACAAAGGATGCTGGAAAAAGTCCTTTTGCTGGTTGGCGTTGCAGTCTaGAGCACTGGTCAGCTCGCC +
Preference number: 4 (lower is better)
Translates to: STPLEDSLQRMLEKVLLLVGVAV*STGQLA
Trigger: GGCGAGCTGACCAGTGCTCCAGACTGCAACGCCAAC...CAGCAAAAGGACTTTTTCCAGCATCCTTTGTAGACTGTCTTCCAAAGGCGTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp GATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGCCCCAGTTGGTGCTTCTCCAGCAGGGACAGGTaGTACTCGCAAAGGTCAATC +
Preference number: 4 (lower is better)
Translates to: DRLCPVPQIQQICPSWCFSSRDR*YSQRSI
Trigger: GATTGACCTTTGCGAGTACCACCTGTCCCTGCTGGA...GAAGCACCAACTGGGGCAAATCTGTTGTATTTGGGGCACAGGACACAATCGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp ACCCATGTAGCACATGACTGGGATGGGAGATTCGCAGATGCCTACTTGATATTTCACAGCTCCGGGCCTTaGGATCGATTGTGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: THVAHDWDGRFADAYLIFHSSGP*DRLCPV
Trigger: CACAGGACACAATCGATCCCAAGGCCCGGAGCTGTG...AAATATCAAGTAGGCATCTGCGAATCTCCCATCCCAGTCATGTGCTACATGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp ATCACCACGGAGATGATGTCAGACCAGACCTTCTTGATGTCAACGCCTTTGGAAACGCAGGCTGGGAACTaGCAATGGTTACCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: ITTEMMSDQTFLMSTPLETQAGN*QWLPGS
Trigger: GCTTCCAGGTAACCATTGCCAGTTCCCAGCCTGCGT...TTCCAAAGGCGTTGACATCAAGAAGGTCTGGTCTGACATCATCTCCGTGGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487468.5
CDS-3UTR CCA 90 bp GATAGGTATTCTTCATTTCATTTTACAGGTAACAGAGGGGAAGTAGCTTGCCCCCACTGTCCCCTCCTCTaGCCATCCCACCCCGATCAC +
Preference number: 4 (lower is better)
Translates to: DRYSSFHFTGNRGEVACPHCPLL*PSHPDH
Trigger: GTGATCGGGGTGGGATGGCCAGAGGAGGGGACAGTG...GGGGCAAGCTACTTCCCCTCTGTTACCTGTAAAATGAAATGAAGAATACCTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
3UTR CAA 72 bp CGAATATCAAACTTGAGCTTGTCGATAAGGAGAGGTTaGCAGATGTACTCCTGGACCACCGCTGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: RISNLSLSIRRG*QMYSWTTAGLL
Trigger: GAGCAGGCCAGCGGTGGTCCAGGAGTACATCTGCAAACCTCTCCTTATCGACAAGCTCAAGTTTGATATTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474723.5
ENST00000487468.5
CDS-3UTR TCA 90 bp GCCTTTGGAAGACAGTCTACAAAGGATGCTGGAAAAAGTCCTTTTGCTGCCAGTCACTGTCCGAGTGGATaGAGTTGCCGCTGTGGATGT +
Preference number: 4 (lower is better)
Translates to: AFGRQSTKDAGKSPFAASHCPSG*SCRCGC
Trigger: ACATCCACAGCGGCAACTTCATCCACTCGGACAGTG...ACTGGCAGCAAAAGGACTTTTTCCAGCATCCTTTGTAGACTGTCTTCCAAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373778.5
ENST00000474723.5
ENST00000487468.5
CDS-3UTR TCA 90 bp AACAGAGGGGAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGCAGACCAGACCTTCTTaGTGTCAACGCCTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: NRGEVACPKSHREQTESLQTRPS*CQRLWK
Trigger: CTTCCAAAGGCGTTGACATCAAGAAGGTCTGGTCTG...CAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCCCCTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR TCA 90 bp ACCCATGTAGCACATGACTGGGATGGGAGATTCGCAGATGCCTACTTGATATTTCCCCGTGGGGATGTCTaGCTGGTAGAAGACTTTGAG +
Preference number: 4 (lower is better)
Translates to: THVAHDWDGRFADAYLIFPRGDV*LVEDFE
Trigger: CTCAAAGTCTTCTACCAGTCAGACATCCCCACGGGG...AAATATCAAGTAGGCATCTGCGAATCTCCCATCCCAGTCATGTGCTACATGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp GCAGATGCCTACTTGATATTTCCACTTCCTTCTCTCGGAACGGGCGGCAGGAAAAGTTCCACCTCCGTGTaGTGTCAATGTAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: ADAYLIFPLPSLGTGGRKSSTSV*CQCRGC
Trigger: ACATCCTCTACATTGACATCACACGGAGGTGGAACT...TTTCCTGCCGCCCGTTCCGAGAGAAGGAAGTGGAAATATCAAGTAGGCATCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp CCCAAATACAACAGATTTGCCCCAGTTGGTGCTTCCTGTGAGCCCAGAATAGAAAGTTGGTGCTTCCTGTaGGCCCAGAATAGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: PKYNRFAPVGASCEPRIESWCFL*AQNRRC
Trigger: GCACCTTCTATTCTGGGCTCACAGGAAGCACCAACT...TTCTATTCTGGGCTCACAGGAAGCACCAACTGGGGCAAATCTGTTGTATTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp GGAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGGTGGGCTCCTGATATaGCTCGGTACAAAACCTAGA +
Preference number: 4 (lower is better)
Translates to: GSSLPQITQGANRKLGSWGGLLI*LGTKPR
Trigger: TCTAGGTTTTGTACCGAGCCATATCAGGAGCCCACC...CCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR CCA 90 bp GGATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGCCCCAGTTGGTGCTTGGTGGGCTCCTGATATaGCTCGGTACAAAACCTAGA +
Preference number: 4 (lower is better)
Translates to: GSIVSCAPNTTDLPQLVLGGLLI*LGTKPR
Trigger: TCTAGGTTTTGTACCGAGCCATATCAGGAGCCCACC...AAGCACCAACTGGGGCAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp GCCTTTGGAAGACAGTCTACAAAGGATGCTGGAAAAAGTCCTTTTGCTGCCAGTTGCGGTGCAGGTTTTTaGGGGTGGGCTCCTGATATG +
Preference number: 4 (lower is better)
Translates to: AFGRQSTKDAGKSPFAASCGAGF*GWAPDM
Trigger: CATATCAGGAGCCCACCCCCAAAAACCTGCACCGCA...ACTGGCAGCAAAAGGACTTTTTCCAGCATCCTTTGTAGACTGTCTTCCAAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000373778.5
ENST00000474723.5
ENST00000487468.5
CDS-3UTR CCA 90 bp GTCCTGTGCCCCAAATACAACAGATTTGCCCCAGTTGGTGCTTCCTGTGAGCCCGTCTACAAAGGATGCTaGAAAAAGTCCTTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: VLCPKYNRFAPVGASCEPVYKGC*KKSFCC
Trigger: GCAGCAAAAGGACTTTTTCCAGCATCCTTTGTAGAC...GGGCTCACAGGAAGCACCAACTGGGGCAAATCTGTTGTATTTGGGGCACAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp GTCCTGTGCCCCAAATACAACAGATTTGCCCCAGTTGGTGCTTCCTGTGAGCCCATTTTCAAACACCCCTaGAGAAAGTTCGTGCTCATG +
Preference number: 4 (lower is better)
Translates to: VLCPKYNRFAPVGASCEPIFKHP*RKFVLM
Trigger: CATGAGCACGAACTTTCTCCAGGGGTGTTTGAAAAT...GGGCTCACAGGAAGCACCAACTGGGGCAAATCTGTTGTATTTGGGGCACAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000373778.5
CDS-3UTR CCA 90 bp ATTTGCCATCCTGTCCACCAGGCGCAGGTAGTTGAACTGTTTTGCGTACTTGGGCATGTAGCACATGACTaGGATGGGAGATTCGCAGAT +
Preference number: 4 (lower is better)
Translates to: ICHPVHQAQVVELFCVLGHVAHD*DGRFAD
Trigger: ATCTGCGAATCTCCCATCCCAGTCATGTGCTACATG...CCCAAGTACGCAAAACAGTTCAACTACCTGCGCCTGGTGGACAGGATGGCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp GTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGCAAACAGAAAGCTTaGAAGTTGGGCCCAGGTTTA +
Preference number: 4 (lower is better)
Translates to: VACPKSHREQTESLEVGPSKQKA*KLGPGL
Trigger: TAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCT...GGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
3UTR CAA 72 bp GTACGAAAGCCTGTTGGCCCCAACTTCATTGTCCCCTaGATGCCCAGGAACCGGATAAACAAATTTGCCATC +
Preference number: 4 (lower is better)
Translates to: VRKPVGPNFIVP*MPRNRINKFAI
Trigger: GATGGCAAATTTGTTTATCCGGTTCCTGGGCATCAAGGGGACAATGAAGTTGGGGCCAACAGGCTTTCGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp AGTCTGGAGCACTGGTCAGCTCGCCGTCCAAAGCATCTTCCTTTCCAGCGAATGAATATGTCATTGTCGTaGAATGAAACTCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: SLEHWSARRPKHLPFQRMNMSLS*NETPCQ
Trigger: CTGGCATGGAGTTTCATTTCACGACAATGACATATT...CATTCGCTGGAAAGGAAGATGCTTTGGACGGCGAGCTGACCAGTGCTCCAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp AGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCAGGGGTCTAAGGACTTaGGTAAGACATACAGACGAA +
Preference number: 4 (lower is better)
Translates to: SSLPQITQGANRKLGSWARGLRT*VRHTDE
Trigger: TTCGTCTGTATGTCTTACTCAAGTCCTTAGACCCCT...GGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR TCA 90 bp GGATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGCCCCAGTTGGTGCTTGTTTGCAGCTCCTTATaGAGGTACGAAAGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: GSIVSCAPNTTDLPQLVLVCSSL*RYESLL
Trigger: CAACAGGCTTTCGTACCTTCATAAGGAGCTGCAAAC...AAGCACCAACTGGGGCAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp ATTTGCCATCCTGTCCACCAGGCGCAGGTAGTTGAACTGTTTTGCGTACTTGGGTCGCAGATGCCTACTTaGTATTTCCACTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: ICHPVHQAQVVELFCVLGSQMPT*YFHFLL
Trigger: GAGAAGGAAGTGGAAATATCAAGTAGGCATCTGCGA...CCCAAGTACGCAAAACAGTTCAACTACCTGCGCCTGGTGGACAGGATGGCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR GCA 90 bp GGGGAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGCACCATCTCCGTCATaGCTGGAAACTTGTTCACTT +
Preference number: 4 (lower is better)
Translates to: GEVACPKSHREQTESLEVAPSPS*LETCSL
Trigger: AAGTGAACAAGTTTCCAGGCATGACGGAGATGGTGC...AACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR CCA 90 bp CAGCTCCGGGCCTTGGGATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGGTCTACAAAGGATGCTaGAAAAAGTCCTTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: QLRALGSIVSCAPNTTDLVYKGC*KKSFCC
Trigger: GCAGCAAAAGGACTTTTTCCAGCATCCTTTGTAGAC...CAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCCCAAGGCCCGGAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp GATGTCACTGGGGTCTTTAATGAGGTAGATTCCATCACCCTGACAACCACCATCAGGGTATGTCTGGGATaGGAGAGCTTATTGGCACAG +
Preference number: 4 (lower is better)
Translates to: DVTGVFNEVDSITLTTTIRVCLG*ESLLAQ
Trigger: CTGTGCCAATAAGCTCTCCCATCCCAGACATACCCT...GATGGTGGTTGTCAGGGTGATGGAATCTACCTCATTAAAGACCCCAGTGACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS-3UTR CCA 90 bp ATCACCCTGACAACCACCATCAGGTTTCACGATAAAAGTGGGCTTCCAGGAGGGAGCAAACAGAAAGCTTaGAAGTTGGGCCCAGGTTTA +
Preference number: 4 (lower is better)
Translates to: ITLTTTIRFHDKSGLPGGSKQKA*KLGPGL
Trigger: TAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCT...CCCTCCTGGAAGCCCACTTTTATCGTGAAACCTGATGGTGGTTGTCAGGGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487468.5
CDS-3UTR TCA 90 bp GTGTCCTGTGCCCCAAATACAACAGATTTGCCCCAGTTGGTGCTTCCTGTGAGCAATATGTCATTGTCGTaGAATGAAACTCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: VSCAPNTTDLPQLVLPVSNMSLS*NETPCQ
Trigger: CTGGCATGGAGTTTCATTTCACGACAATGACATATT...GCTCACAGGAAGCACCAACTGGGGCAAATCTGTTGTATTTGGGGCACAGGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp AGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCGGAAACTTGTTCACTTaGCCGGAGAATATGTCATTG +
Preference number: 4 (lower is better)
Translates to: SSLPQITQGANRKLGSWAGNLFT*PENMSL
Trigger: CAATGACATATTCTCCGGTCAAGTGAACAAGTTTCC...GGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR TCA 90 bp AGTTTGCAGCTCCTTATGAAGGTACGAAAGCCTGTTGGCCCCAACTTCATTGTCAGTTCCACCTCCGTGTaGTGTCAATGTAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: SLQLLMKVRKPVGPNFIVSSTSV*CQCRGC
Trigger: ACATCCTCTACATTGACATCACACGGAGGTGGAACT...GACAATGAAGTTGGGGCCAACAGGCTTTCGTACCTTCATAAGGAGCTGCAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp GAACCGGATAAACAAATTTGCCATCCTGTCCACCAGGCGCAGGTAGTTGAACTGTCGCAGATGCCTACTTaGTATTTCCACTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: EPDKQICHPVHQAQVVELSQMPT*YFHFLL
Trigger: GAGAAGGAAGTGGAAATATCAAGTAGGCATCTGCGA...CAGTTCAACTACCTGCGCCTGGTGGACAGGATGGCAAATTTGTTTATCCGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp CACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACACCCAAGTCGTCTTTCACCATTTaGACCTGGAAACTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: HTGSKQKAWKLGPGLTPKSSFTI*TWKLVH
Trigger: GTGAACAAGTTTCCAGGTTCAAATGGTGAAAGACGA...CTTGGGTGTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487468.5
CDS-3UTR GCA 90 bp TTCTTAAGTGGGTCCATGAGGCGCAGAGTGTCTCTGATCACAGCCACTTTCACTCAAATACAACAGATTTaGCCCAGTTGGTGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: FLSGSMRRRVSLITATFTQIQQI*PSWCFL
Trigger: CAGGAAGCACCAACTGGGGCAAATCTGTTGTATTTG...AGTGAAAGTGGCTGTGATCAGAGACACTCTGCGCCTCATGGACCCACTTAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR TCA 90 bp CTGGGATGGGAGATTCGCAGATGCCTACTTGATATTTCCACTTCCTTCTCTCGGTCGTCTTTCACCATTTaGACCTGGAAACTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: LGWEIRRCLLDISTSFSRSSFTI*TWKLVH
Trigger: GTGAACAAGTTTCCAGGTTCAAATGGTGAAAGACGA...CCGAGAGAAGGAAGTGGAAATATCAAGTAGGCATCTGCGAATCTCCCATCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS-3UTR GCA 90 bp GGGGAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTCTGCATGGTTCTCACTaGTCTGCTCAGAGTAATTTT +
Preference number: 4 (lower is better)
Translates to: GEVACPKSHREQTESLEVLHGSH*SAQSNF
Trigger: AAAATTACTCTGAGCAGAGCAGTGAGAACCATGCAG...AACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR GCA 90 bp GATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGCCCCAGTTGGTGCTTCCTGCATGGTTCTCACTaGTCTGCTCAGAGTAATTTT +
Preference number: 4 (lower is better)
Translates to: DRLCPVPQIQQICPSWCFLHGSH*SAQSNF
Trigger: AAAATTACTCTGAGCAGAGCAGTGAGAACCATGCAG...GAAGCACCAACTGGGGCAAATCTGTTGTATTTGGGGCACAGGACACAATCGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373778.5
CDS-3UTR GCA 90 bp GCAGATGCCTACTTGATATTTCCACTTCCTTCTCTCGGAACGGGCGGCAGGAAAATCGATTGTGTCCTGTaGCCCAAATACAACAGATTT +
Preference number: 4 (lower is better)
Translates to: ADAYLIFPLPSLGTGGRKIDCVL*PKYNRF
Trigger: AAATCTGTTGTATTTGGGGCACAGGACACAATCGAT...TTTCCTGCCGCCCGTTCCGAGAGAAGGAAGTGGAAATATCAAGTAGGCATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp AACAGAGGGGAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGTCTACAAAGGATGCTaGAAAAAGTCCTTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: NRGEVACPKSHREQTESLVYKGC*KKSFCC
Trigger: GCAGCAAAAGGACTTTTTCCAGCATCCTTTGTAGAC...CAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCCCCTCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR CCA 90 bp GGAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGTCTACAAAGGATGCTaGAAAAAGTCCTTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GSSLPQITQGANRKLGSWVYKGC*KKSFCC
Trigger: GCAGCAAAAGGACTTTTTCCAGCATCCTTTGTAGAC...CCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR CCA 90 bp GATAGGTATTCTTCATTTCATTTTACAGGTAACAGAGGGGAAGTAGCTTGCCCCGAAGACTTTGAGCTCTaGAGTCAGCGCGATGACCGT +
Preference number: 4 (lower is better)
Translates to: DRYSSFHFTGNRGEVACPEDFEL*SQRDDR
Trigger: ACGGTCATCGCGCTGACTCCAGAGCTCAAAGTCTTC...GGGGCAAGCTACTTCCCCTCTGTTACCTGTAAAATGAAATGAAGAATACCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR TCA 90 bp AATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACACCCAATATGTCATTGTCGTaGAATGAAACTCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: NHTGSKQKAWKLGPGLTPNMSLS*NETPCQ
Trigger: CTGGCATGGAGTTTCATTTCACGACAATGACATATT...GGGTGTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR TCA 90 bp CCCTGGAGAAAGTTCGTGCTCATGTTCGATTCTCATACTGGGATTTGCATTTACAGGGGTCTAAGGACTTaGGTAAGACATACAGACGAA +
Preference number: 4 (lower is better)
Translates to: PWRKFVLMFDSHTGICIYRGLRT*VRHTDE
Trigger: TTCGTCTGTATGTCTTACTCAAGTCCTTAGACCCCT...GTAAATGCAAATCCCAGTATGAGAATCGAACATGAGCACGAACTTTCTCCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373778.5
CDS-3UTR GCA 90 bp GCCTTTGGAAGACAGTCTACAAAGGATGCTGGAAAAAGTCCTTTTGCTGCCAGTCCTGGAGAAAGTTCGTaGTCATGTTCGATTCTCATA +
Preference number: 4 (lower is better)
Translates to: AFGRQSTKDAGKSPFAASPGESS*SCSILI
Trigger: TATGAGAATCGAACATGAGCACGAACTTTCTCCAGG...ACTGGCAGCAAAAGGACTTTTTCCAGCATCCTTTGTAGACTGTCTTCCAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373778.5
CDS-3UTR TCA 90 bp TCAACGCCTTTGGAAGACAGTCTACAAAGGATGCTGGAAAAAGTCCTTTTGCTGGTCATTGTCGTGAAATaGAACTCCATGCCAGTAGAT +
Preference number: 4 (lower is better)
Translates to: STPLEDSLQRMLEKVLLLVIVVK*NSMPVD
Trigger: ATCTACTGGCATGGAGTTTCATTTCACGACAATGAC...CAGCAAAAGGACTTTTTCCAGCATCCTTTGTAGACTGTCTTCCAAAGGCGTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373778.5
ENST00000474723.5
ENST00000487468.5
CDS-3UTR TCA 90 bp TCAACGCCTTTGGAAGACAGTCTACAAAGGATGCTGGAAAAAGTCCTTTTGCTGATCTTGAACTTCCTCTaGGCCAGGAAAAAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: STPLEDSLQRMLEKVLLLILNFL*ARKKKA
Trigger: AGCTTTCTTTTTCCTGGCTCAGAGGAAGTTCAAGAT...CAGCAAAAGGACTTTTTCCAGCATCCTTTGTAGACTGTCTTCCAAAGGCGTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp CTGGGATGGGAGATTCGCAGATGCCTACTTGATATTTCCACTTCCTTCTCTCGGGTTCGATTCTCATACTaGGATTTGCATTTACTTCAA +
Preference number: 4 (lower is better)
Translates to: LGWEIRRCLLDISTSFSRVRFSY*DLHLLQ
Trigger: TTGAAGTAAATGCAAATCCCAGTATGAGAATCGAAC...CCGAGAGAAGGAAGTGGAAATATCAAGTAGGCATCTGCGAATCTCCCATCCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CCA 90 bp CTGATATGGCTCGGTACAAAACCTAGAGAGTCCGTCTTTGGCTATATAAATCTCTTCCTTTCCAGCGAATaGTTTTTCAAGCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LIWLGTKPRESVFGYINLFLSSE*FFKLLR
Trigger: TCTCAGCAGCTTGAAAAACCATTCGCTGGAAAGGAA...GAGATTTATATAGCCAAAGACGGACTCTCTAGGTTTTGTACCGAGCCATATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
3UTR CAA 72 bp TTGAGTAAGACATACAGACGAATATCAAACTTGAGCTaGTCGATAAGGAGAGGTTTGCAGATGTACTCCTGG +
Preference number: 4 (lower is better)
Translates to: LSKTYRRISNLS*SIRRGLQMYSW
Trigger: CCAGGAGTACATCTGCAAACCTCTCCTTATCGACAAGCTCAAGTTTGATATTCGTCTGTATGTCTTACTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474723.5
ENST00000487468.5
CDS-3UTR TCA 90 bp TGCTCATGTTCGATTCTCATACTGGGATTTGCATTTACTTCAAGTAGTATAGGCGTCATTGTCGTGAAATaGAACTCCATGCCAGTAGAT +
Preference number: 4 (lower is better)
Translates to: CSCSILILGFAFTSSSIGVIVVK*NSMPVD
Trigger: ATCTACTGGCATGGAGTTTCATTTCACGACAATGAC...GCCTATACTACTTGAAGTAAATGCAAATCCCAGTATGAGAATCGAACATGAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS CCA 90 bp CCTCCCACCGGGCCGCCAGCTCGCTCTCGGAGCTGCCCCGCCGCATaGTGCTCAGGGCCGGGGCCAGTGCCAGTGCCACCGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: PPTGPPARSRSCPAA*CSGPGPVPVPPPPP
Trigger: CGGCGGCGGCGGTGGCACTGGCACTGGCCCCGGCCCTGAGCACCATGCGGCGGGGCAGCTCCGAGAGCGAGCTGGCGGCCCGGTGGGAGG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000474723.5
CDS GCA 90 bp CCACCGCCTCCGCCTCCCACCGGGCCGCCAGCTCGCTCTCGGAGCTaGCCCGCCGCATGGTGCTCAGGGCCGGGGCCAGTGCCAGTGCCA +
Preference number: 5 (lower is better)
Translates to: PPPPPPTGPPARSRS*PAAWCSGPGPVPVP
Trigger: TGGCACTGGCACTGGCCCCGGCCCTGAGCACCATGCGGCGGGGCAGCTCCGAGAGCGAGCTGGCGGCCCGGTGGGAGGCGGAGGCGGTGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000474723.5
CDS GCA 90 bp CAGCTTCGGCCCTTGTCCCGGGGCTTCCCGTGCGGGCAGAGGCCCTaGACCGGCTTCGGCTTGGACGGGGGCAGCGTGGGCGGCGGCCGC +
Preference number: 5 (lower is better)
Translates to: QLRPLSRGFPCGQRP*TGFGLDGGSVGGGR
Trigger: GCGGCCGCCGCCCACGCTGCCCCCGTCCAAGCCGAAGCCGGTGCAGGGCCTCTGCCCGCACGGGAAGCCCCGGGACAAGGGCCGAAGCTG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000474723.5
CDS GCA 90 bp CCGCCGCCGCTCCGCCGCCCCAGTCCGCCACCAAACTGCCGCCGCTaGAGCCGCTGCCACGCGTTCCCCGCCCGAGCCCGTTGCCATGAT +
Preference number: 5 (lower is better)
Translates to: PPPLRRPSPPPNCRR*SRCHAFPARARCHD
Trigger: ATCATGGCAACGGGCTCGGGCGGGGAACGCGTGGCAGCGGCTGCAGCGGCGGCAGTTTGGTGGCGGACTGGGGCGGCGGAGCGGCGGCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000474723.5
CDS CCA 90 bp CCCGGGGCTTCCCGTGCGGGCAGAGGCCCTGCACCGGCTTCGGCTTaGACGGGGGCAGCGTGGGCGGCGGCCGCTGAAGGACCTGGGTGT +
Preference number: 5 (lower is better)
Translates to: PGASRAGRGPAPASA*TGAAWAAAAEGPGC
Trigger: ACACCCAGGTCCTTCAGCGGCCGCCGCCCACGCTGCCCCCGTCCAAGCCGAAGCCGGTGCAGGGCCTCTGCCCGCACGGGAAGCCCCGGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000474723.5
CDS CCA 90 bp GCGGGCAGAGGCCCTGCACCGGCTTCGGCTTGGACGGGGGCAGCGTaGGCGGCGGCCGCTGAAGGACCTGGGTGTTCCCCTCCTCAGCCG +
Preference number: 5 (lower is better)
Translates to: AGRGPAPASAWTGAA*AAAAEGPGCSPPQP
Trigger: CGGCTGAGGAGGGGAACACCCAGGTCCTTCAGCGGCCGCCGCCCACGCTGCCCCCGTCCAAGCCGAAGCCGGTGCAGGGCCTCTGCCCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000474723.5
CDS TCA 90 bp TGCACCGGCTTCGGCTTGGACGGGGGCAGCGTGGGCGGCGGCCGCTaGAGGACCTGGGTGTTCCCCTCCTCAGCCGCACTGGGCTGCGCC +
Preference number: 5 (lower is better)
Translates to: CTGFGLDGGSVGGGR*RTWVFPSSAALGCA
Trigger: GGCGCAGCCCAGTGCGGCTGAGGAGGGGAACACCCAGGTCCTTCAGCGGCCGCCGCCCACGCTGCCCCCGTCCAAGCCGAAGCCGGTGCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000474723.5
CDS GCA 90 bp CTCCGCCGCCCCAGTCCGCCACCAAACTGCCGCCGCTGCAGCCGCTaGCACGCGTTCCCCGCCCGAGCCCGTTGCCATGATCGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: LRRPSPPPNCRRCSR*HAFPARARCHDRSG
Trigger: GCCTGAGCGATCATGGCAACGGGCTCGGGCGGGGAACGCGTGGCAGCGGCTGCAGCGGCGGCAGTTTGGTGGCGGACTGGGGCGGCGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321582.11
ENST00000373776.5
CDS GCA 90 bp GCCGCTGGGAGCCGTTCTCGCCGGAACCGTGGCCCGAGCTCCGCTTaGAGCTTCGGCCCTTGTCCCGGGGCTTCCCGTGCGGGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: AAGSRSRRNRGPSSA*SFGPCPGASRAGRG
Trigger: GCCTCTGCCCGCACGGGAAGCCCCGGGACAAGGGCCGAAGCTGCAAGCGGAGCTCGGGCCACGGTTCCGGCGAGAACGGCTCCCAGCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000474723.5
CDS CCA 90 bp CTGTCCACGGTGACCGGCCGCTGGGAGCCGTTCTCGCCGGAACCGTaGCCCGAGCTCCGCTTGCAGCTTCGGCCCTTGTCCCGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: LSTVTGRWEPFSPEP*PELRLQLRPLSRGF
Trigger: GAAGCCCCGGGACAAGGGCCGAAGCTGCAAGCGGAGCTCGGGCCACGGTTCCGGCGAGAACGGCTCCCAGCGGCCGGTCACCGTGGACAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000474723.5
CDS CCA 90 bp CCCACCCCGCGGATGCGCTGGATCTCGAGGGCGCAGAACTCGGAGTaGCGAGGAGAAGCGGGAGGGCAGATTGAGCGCGCGTGGGGCTCG +
Preference number: 5 (lower is better)
Translates to: PTPRMRWISRAQNSE*RGEAGGQIERAWGS
Trigger: CGAGCCCCACGCGCGCTCAATCTGCCCTCCCGCTTCTCCTCGCCACTCCGAGTTCTGCGCCCTCGAGATCCAGCGCATCCGCGGGGTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR CAA 90 bp CAGCCGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTGCTTTGGCCGCCGCTTaGGCCGCAGCCACCGCCTCC +
Preference number: 5 (lower is better)
Translates to: QPHTETVRGDLSWAPRQPALAAA*AAATAS
Trigger: GGAGGCGGTGGCTGCGGCCAAAGCGGCGGCCAAAGC...AGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS-3UTR CAA 90 bp CAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTGCCTGCCATTCCTCTGTGCACCGGCTTCGGCTaGGACGGGGGCAGCGTGGGC +
Preference number: 5 (lower is better)
Translates to: QFVGTSAGPLGSLPAIPLCTGFG*DGGSVG
Trigger: GCCCACGCTGCCCCCGTCCAAGCCGAAGCCGGTGCA...CAGAGGAATGGCAGGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS TCA 90 bp CCGCTGCAGCCGCTGCCACGCGTTCCCCGCCCGAGCCCGTTGCCATaGTCGCTCAGGCTCGGGTTGACAGCGGCAGTCACCGCATCGAGA +
Preference number: 5 (lower is better)
Translates to: PLQPLPRVPRPSPLP*SLRLGLTAAVTASR
Trigger: TCTCGATGCGGTGACTGCCGCTGTCAACCCGAGCCTGAGCGATCATGGCAACGGGCTCGGGCGGGGAACGCGTGGCAGCGGCTGCAGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS TCA 90 bp GCGTTCCCCGCCCGAGCCCGTTGCCATGATCGCTCAGGCTCGGGTTaGCAGCGGCAGTCACCGCATCGAGACGGGGTCCGGGAAGGGACA +
Preference number: 5 (lower is better)
Translates to: AFPARARCHDRSGSG*QRQSPHRDGVREGT
Trigger: TGTCCCTTCCCGGACCCCGTCTCGATGCGGTGACTGCCGCTGTCAACCCGAGCCTGAGCGATCATGGCAACGGGCTCGGGCGGGGAACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS CCA 90 bp AAGAGGGCAAAGAGCCGCCAGGACCCGCCCACCCCGCGGATGCGCTaGATCTCGAGGGCGCAGAACTCGGAGTGGCGAGGAGAAGCGGGA +
Preference number: 5 (lower is better)
Translates to: KRAKSRQDPPTPRMR*ISRAQNSEWRGEAG
Trigger: TCCCGCTTCTCCTCGCCACTCCGAGTTCTGCGCCCTCGAGATCCAGCGCATCCGCGGGGTGGGCGGGTCCTGGCGGCTCTTTGCCCTCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS GCA 90 bp GTTGGAAGAGGGCAAAGAGCCGCCAGGACCCGCCCACCCCGCGGATaGGCTGGATCTCGAGGGCGCAGAACTCGGAGTGGCGAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: VGRGQRAARTRPPRG*AGSRGRRTRSGEEK
Trigger: CTTCTCCTCGCCACTCCGAGTTCTGCGCCCTCGAGATCCAGCGCATCCGCGGGGTGGGCGGGTCCTGGCGGCTCTTTGCCCTCTTCCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS GCA 90 bp AAGGGACAATCGCCGGCCGAGCCCCAGCGACCTCATAGGCGAGGCTaGCCACGTGACCCTGCCTGTCACAGAGGCAGCGGCGGCCATGTT +
Preference number: 5 (lower is better)
Translates to: KGQSPAEPQRPHRRG*PRDPACHRGSGGHV
Trigger: AACATGGCCGCCGCTGCCTCTGTGACAGGCAGGGTCACGTGGGCAGCCTCGCCTATGAGGTCGCTGGGGCTCGGCCGGCGATTGTCCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS GCA 90 bp GGCGCTTGCAGGGATGGGGCTTATCCTGCAGCAAAGCACAGGGGCTaGCCAGCTATGTGTGCCGTGCCTCTGGGCCAGCCAGACTCCCGG +
Preference number: 5 (lower is better)
Translates to: GACRDGAYPAAKHRG*PAMCAVPLGQPDSR
Trigger: CCGGGAGTCTGGCTGGCCCAGAGGCACGGCACACATAGCTGGGCAGCCCCTGTGCTTTGCTGCAGGATAAGCCCCATCCCTGCAAGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 90 bp GGGTCGGACAGGGGCTCAGGGAGGCTGCAGAGCCTGGTCCTGAGGTaGAGGGGTCAGGTGCGGGCCTTAGGATGGAAAGAAGGGAAGGGT +
Preference number: 5 (lower is better)
Translates to: GSDRGSGRLQSLVLR*RGQVRALGWKEGKG
Trigger: ACCCTTCCCTTCTTTCCATCCTAAGGCCCGCACCTGACCCCTGCACCTCAGGACCAGGCTCTGCAGCCTCCCTGAGCCCCTGTCCGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS-3UTR CAA 90 bp CGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTGCCTCCACAGCTCCGGGCCTaGGGATCGATTGTGTCCTGT +
Preference number: 5 (lower is better)
Translates to: RTQRQFVGTSAGPLGSLPPQLRA*GSIVSC
Trigger: ACAGGACACAATCGATCCCAAGGCCCGGAGCTGTGG...AGGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS CCA 90 bp GGCCATGGTGGGCGGAGCAGCCCGCCTCCAGATGATGGCATGGGGTaGGAGAGGCCCTCACCAGGAGAGCTGATGTTTTCATATCACCCC +
Preference number: 5 (lower is better)
Translates to: GHGGRSSPPPDDGMG*ERPSPGELMFSYHP
Trigger: GGGGTGATATGAAAACATCAGCTCTCCTGGTGAGGGCCTCTCCCACCCCATGCCATCATCTGGAGGCGGGCTGCTCCGCCCACCATGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 90 bp CGTGGACCCAGCACATGCCTGACCCTGCAGGAACGCACAGCTGGGTaGGAACCAATGCTGTGGTCCCACAGTGCGCGCGACAAGACAGGA +
Preference number: 5 (lower is better)
Translates to: RGPSTCLTLQERTAG*EPMLWSHSARDKTG
Trigger: TCCTGTCTTGTCGCGCGCACTGTGGGACCACAGCATTGGTTCCCACCCAGCTGTGCGTTCCTGCAGGGTCAGGCATGTGCTGGGTCCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 90 bp CCAACGTGGACCCAGCACATGCCTGACCCTGCAGGAACGCACAGCTaGGTGGGAACCAATGCTGTGGTCCCACAGTGCGCGCGACAAGAC +
Preference number: 5 (lower is better)
Translates to: PTWTQHMPDPAGTHS*VGTNAVVPQCARQD
Trigger: GTCTTGTCGCGCGCACTGTGGGACCACAGCATTGGTTCCCACCCAGCTGTGCGTTCCTGCAGGGTCAGGCATGTGCTGGGTCCACGTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS-3UTR CAA 90 bp AAGCTGCTCTCGTCTTCCGTTTTCCAGGAGGACAGAGTGGCCCTCAGGACAGGGTGGCCCGAGCTCCGCTaGCAGCTTCGGCCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: KLLSSSVFQEDRVALRTGWPELR*QLRPLS
Trigger: GGACAAGGGCCGAAGCTGCAAGCGGAGCTCGGGCCA...CCCTGTCCTGAGGGCCACTCTGTCCTCCTGGAAAACGGAAGACGAGAGCAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS-3UTR CAA 90 bp GGTGAAGCACAGCTCAGCCGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGAGGTGGGCTTCGGGGTaGGCGTTGCAGTCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: GEAQLSRTQRQFVGTSAGRWASG*ALQSGA
Trigger: TGCTCCAGACTGCAACGCCAACCCCGAAGCCCACCT...CCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCGGCTGAGCTGTGCTTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CAA 90 bp CGGGACGCCCCGGCCACACACCAGGCGTTTTTCATCCAGCAGGGACAGGTGGTAGGATGGGAGAGCTTATaGGCACAGCTGGTGCGGGGT +
Preference number: 5 (lower is better)
Translates to: RDAPATHQAFFIQQGQVVGWESL*AQLVRG
Trigger: ACCCCGCACCAGCTGTGCCAATAAGCTCTCCCATCC...TACCACCTGTCCCTGCTGGATGAAAAACGCCTGGTGTGTGGCCGGGGCGTCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CAA 90 bp CAGATGTACTCCTGGACCACCGCTGGCCTGCTCTGGAGGGTCCCTGCCAGGCGGGGGCCTTGGGATCGATaGTGTCCTGTGCCCCAAATA +
Preference number: 5 (lower is better)
Translates to: QMYSWTTAGLLWRVPARRGPWDR*CPVPQI
Trigger: TATTTGGGGCACAGGACACAATCGATCCCAAGGCCC...CCGCCTGGCAGGGACCCTCCAGAGCAGGCCAGCGGTGGTCCAGGAGTACATCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS GCA 90 bp TGGGGCTTATCCTGCAGCAAAGCACAGGGGCTGCCCAGCTATGTGTaGCGTGCCTCTGGGCCAGCCAGACTCCCGGCTCTACTTCCTATC +
Preference number: 5 (lower is better)
Translates to: WGLSCSKAQGLPSYV*RASGPARLPALLPI
Trigger: GATAGGAAGTAGAGCCGGGAGTCTGGCTGGCCCAGAGGCACGGCACACATAGCTGGGCAGCCCCTGTGCTTTGCTGCAGGATAAGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 90 bp CTGCAGCAAAGCACAGGGGCTGCCCAGCTATGTGTGCCGTGCCTCTaGGCCAGCCAGACTCCCGGCTCTACTTCCTATCTTCTCGGAGGA +
Preference number: 5 (lower is better)
Translates to: LQQSTGAAQLCVPCL*ASQTPGSTSYLLGG
Trigger: TCCTCCGAGAAGATAGGAAGTAGAGCCGGGAGTCTGGCTGGCCCAGAGGCACGGCACACATAGCTGGGCAGCCCCTGTGCTTTGCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 90 bp CAGCCTGGTGTCCTGTCTGTGAGATTGAATGGGAGGGGGTGCCCATaGGTACGCAGCCCAGGCCTGGCCACAAAGGGCCATGGAGAGACA +
Preference number: 5 (lower is better)
Translates to: QPGVLSVRLNGRGCP*VRSPGLATKGHGET
Trigger: TGTCTCTCCATGGCCCTTTGTGGCCAGGCCTGGGCTGCGTACCCATGGGCACCCCCTCCCATTCAATCTCACAGACAGGACACCAGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 90 bp CTCTCACCAGACCTCCAGGAGCCTCCGCTGTCAGGGGCGTGGAGGTaGGCAGACGTATTTCCTGGCATCCGTCTTGTTTCCGCACGTCGA +
Preference number: 5 (lower is better)
Translates to: LSPDLQEPPLSGAWR*ADVFPGIRLVSARR
Trigger: TCGACGTGCGGAAACAAGACGGATGCCAGGAAATACGTCTGCCCACCTCCACGCCCCTGACAGCGGAGGCTCCTGGAGGTCTGGTGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS-3UTR CAA 90 bp GGGCGCTCCAGCCCTGAAAGCTGCTCTCGTCTTCCGTTTTCCAGGAGGACAGAGGCTTCGGGGTTGGCGTaGCAGTCTGGAGCACTGGTC +
Preference number: 5 (lower is better)
Translates to: GRSSPESCSRLPFSRRTEASGLA*QSGALV
Trigger: GACCAGTGCTCCAGACTGCAACGCCAACCCCGAAGC...CTCTGTCCTCCTGGAAAACGGAAGACGAGAGCAGCTTTCAGGGCTGGAGCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS GCA 90 bp TTGAAAGGAGGCTGGCTAGCCGGCTGGAGGGGTGTTGGTGAGGACTaGCCAGCCTGGTGTCCTGTCTGTGAGATTGAATGGGAGGGGGTG +
Preference number: 5 (lower is better)
Translates to: LKGGWLAGWRGVGED*PAWCPVCEIEWEGV
Trigger: CACCCCCTCCCATTCAATCTCACAGACAGGACACCAGGCTGGGCAGTCCTCACCAACACCCCTCCAGCCGGCTAGCCAGCCTCCTTTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 90 bp GAGGAAGCCAGGTGGTTTGTTTTAGGGATGGATGCTGCTCTCTCCTaGAGGCCCTGCCTCTGCCCACTGGGAGGGGTCTGTTGGGACCAG +
Preference number: 5 (lower is better)
Translates to: EEARWFVLGMDAALS*RPCLCPLGGVCWDQ
Trigger: CTGGTCCCAACAGACCCCTCCCAGTGGGCAGAGGCAGGGCCTCCAGGAGAGAGCAGCATCCATCCCTAAAACAAACCACCTGGCTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS-3UTR CAA 90 bp CCAGAGAGCCCTCTTGAGGCCGGTCAAGGCTGGAAACGCAGGCTGGGAACTGGCCAGAGGGGAAGTAGCTaGCCCCAAATCACACAGGGA +
Preference number: 5 (lower is better)
Translates to: PESPLEAGQGWKRRLGTGQRGSS*PQITQG
Trigger: TCCCTGTGTGATTTGGGGCAAGCTACTTCCCCTCTG...GCCAGTTCCCAGCCTGCGTTTCCAGCCTTGACCGGCCTCAAGAGGGCTCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487468.5
CDS GCA 90 bp CTTATCCTGCAGCAAAGCACAGGGGCTGCCCAGCTATGTGTGCCGTaGCTCTGGGCCAGCCAGACTCCCGGCTCTACTTCCTATCTTCTC +
Preference number: 5 (lower is better)
Translates to: LILQQSTGAAQLCVP*LWASQTPGSTSYLL
Trigger: GAGAAGATAGGAAGTAGAGCCGGGAGTCTGGCTGGCCCAGAGGCACGGCACACATAGCTGGGCAGCCCCTGTGCTTTGCTGCAGGATAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 90 bp GCCTCTGCGGGACGTGGGTTTCCACACCTGCAAAATGGGATGTTTTaGGGAGTGCTGAGGCACCGTGCAGAACCGAGGAAGTGCCGAGGA +
Preference number: 5 (lower is better)
Translates to: ASAGRGFPHLQNGMF*GVLRHRAEPRKCRG
Trigger: TCCTCGGCACTTCCTCGGTTCTGCACGGTGCCTCAGCACTCCCCAAAACATCCCATTTTGCAGGTGTGGAAACCCACGTCCCGCAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS-3UTR CAA 90 bp GGGGAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGCTTTGGCCGCCGCTTaGGCCGCAGCCACCGCCTCC +
Preference number: 5 (lower is better)
Translates to: GEVACPKSHREQTESLEVALAAA*AAATAS
Trigger: GGAGGCGGTGGCTGCGGCCAAAGCGGCGGCCAAAGC...AACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR CAA 90 bp AGGAGAGGTTTGCAGATGTACTCCTGGACCACCGCTGGCCTGCTCTGGAGGGTCGGGAACTCCTTCCACTaGAGCTGGCGGATGCTGATC +
Preference number: 5 (lower is better)
Translates to: RRGLQMYSWTTAGLLWRVGNSFH*SWRMLI
Trigger: GATCAGCATCCGCCAGCTCAAGTGGAAGGAGTTCCC...GACCCTCCAGAGCAGGCCAGCGGTGGTCCAGGAGTACATCTGCAAACCTCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474723.5
ENST00000487468.5
CDS-3UTR CAA 90 bp AAGCACAGCTCAGCCGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCAGGTACGAAAGCCTGTaGGCCCCAACTTCATTGTCC +
Preference number: 5 (lower is better)
Translates to: KHSSAAHRDSSWGPQLGPRYESL*APTSLS
Trigger: GGACAATGAAGTTGGGGCCAACAGGCTTTCGTACCT...GGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCGGCTGAGCTGTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CAA 90 bp AGGCAGAATGCCTGGGGCGCTCCAGCCCTGAAAGCTGCTCTCGTCTTCCGTTTTGGATGGGAGAGCTTATaGGCACAGCTGGTGCGGGGT +
Preference number: 5 (lower is better)
Translates to: RQNAWGAPALKAALVFRFGWESL*AQLVRG
Trigger: ACCCCGCACCAGCTGTGCCAATAAGCTCTCCCATCC...AAAACGGAAGACGAGAGCAGCTTTCAGGGCTGGAGCGCCCCAGGCATTCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CAA 90 bp CGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTGCCTCCAAATACAACAGATTaGCCCCAGTTGGTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: RTQRQFVGTSAGPLGSLPPNTTD*PQLVLP
Trigger: AGGAAGCACCAACTGGGGCAAATCTGTTGTATTTGG...AGGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CAA 90 bp GTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAAGCGGGAGGGCAGATaGAGCGCGCGTGGGGCTCGT +
Preference number: 5 (lower is better)
Translates to: VACPKSHREQTESLEVGPKREGR*SARGAR
Trigger: ACGAGCCCCACGCGCGCTCAATCTGCCCTCCCGCTT...GGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS TCA 90 bp CAGCCATGGGGAATGCCAGCTCCCTGCCGGGAGAGCCATCATTTCTaGGCTTTCAGGGAAGATGCTCGTGTGCTGGCCATTGCAAGCCCA +
Preference number: 5 (lower is better)
Translates to: QPWGMPAPCRESHHF*AFREDARVLAIASP
Trigger: TGGGCTTGCAATGGCCAGCACACGAGCATCTTCCCTGAAAGCTCAGAAATGATGGCTCTCCCGGCAGGGAGCTGGCATTCCCCATGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 90 bp AGGTGGTTTGTTTTAGGGATGGATGCTGCTCTCTCCTGGAGGCCCTaGCTCTGCCCACTGGGAGGGGTCTGTTGGGACCAGCACTTGCTA +
Preference number: 5 (lower is better)
Translates to: RWFVLGMDAALSWRP*LCPLGGVCWDQHLL
Trigger: TAGCAAGTGCTGGTCCCAACAGACCCCTCCCAGTGGGCAGAGGCAGGGCCTCCAGGAGAGAGCAGCATCCATCCCTAAAACAAACCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 90 bp GGTTCTGCTAAACGTTCCTATTCACAGCAAGCACCTGCTGGCCCCTaGTCTGTGCCAACGTGGACCCAGCACATGCCTGACCCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: GSAKRSYSQQAPAGP*SVPTWTQHMPDPAG
Trigger: TCCTGCAGGGTCAGGCATGTGCTGGGTCCACGTTGGCACAGAGCAGGGGCCAGCAGGTGCTTGCTGTGAATAGGAACGTTTAGCAGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 90 bp GAGGACCTGCTGGGAACTCAACAACCCCACACAAACTCAGGGCAATaGAGAGTTGAAAGGAGGCTGGCTAGCCGGCTGGAGGGGTGTTGG +
Preference number: 5 (lower is better)
Translates to: EDLLGTQQPHTNSGQ*RVERRLASRLEGCW
Trigger: CCAACACCCCTCCAGCCGGCTAGCCAGCCTCCTTTCAACTCTGCATTGCCCTGAGTTTGTGTGGGGTTGTTGAGTTCCCAGCAGGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 90 bp TGCCTGACCCTGCAGGAACGCACAGCTGGGTGGGAACCAATGCTGTaGTCCCACAGTGCGCGCGACAAGACAGGAACTTTCCAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: CLTLQERTAGWEPML*SHSARDKTGTFQFL
Trigger: CAAGAACTGGAAAGTTCCTGTCTTGTCGCGCGCACTGTGGGACCACAGCATTGGTTCCCACCCAGCTGTGCGTTCCTGCAGGGTCAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS-3UTR CAA 90 bp CGCACACAGAGACAGTTCGTGGGGACCTCAGCTGGGCCCCTCGGCAGCCTGCCTAAGGGGTCTAAGGACTaGAGTAAGACATACAGACGA +
Preference number: 5 (lower is better)
Translates to: RTQRQFVGTSAGPLGSLPKGSKD*SKTYRR
Trigger: TCGTCTGTATGTCTTACTCAAGTCCTTAGACCCCTT...AGGCAGGCTGCCGAGGGGCCCAGCTGAGGTCCCCACGAACTGTCTCTGTGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CAA 90 bp GTCCCGCTGGTCCAGGGTCATGGAGTTCCACCTCCGTGTGATGTCAATGTAGAGCCACAGCTCCGGGCCTaGGGATCGATTGTGTCCTGT +
Preference number: 5 (lower is better)
Translates to: VPLVQGHGVPPPCDVNVEPQLRA*GSIVSC
Trigger: ACAGGACACAATCGATCCCAAGGCCCGGAGCTGTGG...CTCTACATTGACATCACACGGAGGTGGAACTCCATGACCCTGGACCAGCGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CAA 90 bp CACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACACCCAAGCCTCGCTCAGGCTCGGGTaGACAGCGGCAGTCACCGCA +
Preference number: 5 (lower is better)
Translates to: HREQTESLEVGPRFNTQASLRLG*TAAVTA
Trigger: TGCGGTGACTGCCGCTGTCAACCCGAGCCTGAGCGA...GGCTTGGGTGTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS GCA 90 bp GTGCCCCATGTAGAGAACACTCGACACACCTCAGGAGGCACATCCTaGCAGTGCCACCTTCCCACCTGTCCTGCCTTCTGCTTGGGAAAA +
Preference number: 5 (lower is better)
Translates to: VPHVENTRHTSGGTS*QCHLPTCPAFCLGK
Trigger: TTTTCCCAAGCAGAAGGCAGGACAGGTGGGAAGGTGGCACTGGCAGGATGTGCCTCCTGAGGTGTGTCGAGTGTTCTCTACATGGGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 90 bp AGGCTGAGCTTGATCTTCTTACCCGTTCATTCCAAGCCCCCGGAGTaGCCAGCTCTCCAGGAACTCAGCCAGCAGACTAGGGAGAGGACT +
Preference number: 5 (lower is better)
Translates to: RLSLIFLPVHSKPPE*PALQELSQQTRERT
Trigger: AGTCCTCTCCCTAGTCTGCTGGCTGAGTTCCTGGAGAGCTGGGCACTCCGGGGGCTTGGAATGAACGGGTAAGAAGATCAAGCTCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 90 bp GCTTTGCCAGGTCCTGCCTGCCTGTCTTCAATAGGCCCTGGACCTTaGCATGCCCAAGGCTGTTTCCAAAATGCCACCTTCTGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: ALPGPACLSSIGPGP*HAQGCFQNATFCCL
Trigger: CAGGCAGCAGAAGGTGGCATTTTGGAAACAGCCTTGGGCATGCCAAGGTCCAGGGCCTATTGAAGACAGGCAGGCAGGACCTGGCAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 90 bp CAAGTGAGACAGGACTTGCCACTCTCACTAAGTGGCTGGGAGACCTaGAGCCCTTCCTGGGGTGCTCAGCAGGAGAACAGATCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: QVRQDLPLSLSGWET*SPSWGAQQENRSES
Trigger: GCTCTCTGATCTGTTCTCCTGCTGAGCACCCCAGGAAGGGCTCCAGGTCTCCCAGCCACTTAGTGAGAGTGGCAAGTCCTGTCTCACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS-3UTR CAA 90 bp GGGGAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTTTGCAGCTTCGGCCCTaGTCCCGGGGCTTCCCGTGC +
Preference number: 5 (lower is better)
Translates to: GEVACPKSHREQTESLEVLQLRP*SRGFPC
Trigger: GCACGGGAAGCCCCGGGACAAGGGCCGAAGCTGCAA...AACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR CAA 90 bp CCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACTGGCCCGAGCTCCGCTaGCAGCTTCGGCCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: PKSHREQTESLEVGPRFNWPELR*QLRPLS
Trigger: GGACAAGGGCCGAAGCTGCAAGCGGAGCTCGGGCCA...GTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS TCA 90 bp GAGCAGCATTACAGACCTGCCCTACTACCTGGGGAACTGAGCCGATaGCACCTCCACAGTGCCCCATGTAGAGAACACTCGACACACCTC +
Preference number: 5 (lower is better)
Translates to: EQHYRPALLPGELSR*HLHSAPCREHSTHL
Trigger: GAGGTGTGTCGAGTGTTCTCTACATGGGGCACTGTGGAGGTGTCATCGGCTCAGTTCCCCAGGTAGTAGGGCAGGTCTGTAATGCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS TCA 90 bp CAGCAGGAGAACAGATCAGAGAGCCTCAAGCTAAGTCCCCAGAACTaGGTGGAGCAAACACCCAGCCTCTGCGGGACGTGGGTTTCCACA +
Preference number: 5 (lower is better)
Translates to: QQENRSESLKLSPQN*VEQTPSLCGTWVST
Trigger: TGTGGAAACCCACGTCCCGCAGAGGCTGGGTGTTTGCTCCACTCAGTTCTGGGGACTTAGCTTGAGGCTCTCTGATCTGTTCTCCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 90 bp TGGGCCTTCCTTTCCTCATCTGAAAGGGGAGCAGCATTACAGACCTaGCCTACTACCTGGGGAACTGAGCCGATGACACCTCCACAGTGC +
Preference number: 5 (lower is better)
Translates to: WAFLSSSERGAALQT*PTTWGTEPMTPPQC
Trigger: GCACTGTGGAGGTGTCATCGGCTCAGTTCCCCAGGTAGTAGGGCAGGTCTGTAATGCTGCTCCCCTTTCAGATGAGGAAAGGAAGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 90 bp CCTAGAGTCGGAGGAGCTATTATCTGTTTACGGACACAGGACAGCTaGCGTGTCCCAGGGAGCCAACAAGGCAGCCGGGAATGTAGAGGT +
Preference number: 5 (lower is better)
Translates to: PRVGGAIICLRTQDS*RVPGSQQGSRECRG
Trigger: ACCTCTACATTCCCGGCTGCCTTGTTGGCTCCCTGGGACACGGCAGCTGTCCTGTGTCCGTAAACAGATAATAGCTCCTCCGACTCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 90 bp GAGCTTGGCTTTGCCAGGTCCTGCCTGCCTGTCTTCAATAGGCCCTaGACCTTGGCATGCCCAAGGCTGTTTCCAAAATGCCACCTTCTG +
Preference number: 5 (lower is better)
Translates to: ELGFARSCLPVFNRP*TLACPRLFPKCHLL
Trigger: CAGAAGGTGGCATTTTGGAAACAGCCTTGGGCATGCCAAGGTCCAGGGCCTATTGAAGACAGGCAGGCAGGACCTGGCAAAGCCAAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 90 bp CTGCGAGGGGCTTGGGGGAGCAGTCAGTGTTCTGTGGCCCAAGACTaGGTCCTGGTTGGAATCTTAGCAAACACCTTCATGTTGGAGGAC +
Preference number: 5 (lower is better)
Translates to: LRGAWGSSQCSVAQD*VLVGILANTFMLED
Trigger: GTCCTCCAACATGAAGGTGTTTGCTAAGATTCCAACCAGGACCCAGTCTTGGGCCACAGAACACTGACTGCTCCCCCAAGCCCCTCGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS-3UTR CAA 90 bp GAAATAAACACGATGTTCTCAGGCTTTTCCCGGTGGGCGCGTGGAGGCCCCGGCTCGATAAGGAGAGGTTaGCAGATGTACTCCTGGACC +
Preference number: 5 (lower is better)
Translates to: EINTMFSGFSRWARGGPGSIRRG*QMYSWT
Trigger: GGTCCAGGAGTACATCTGCAAACCTCTCCTTATCGA...GCCGGGGCCTCCACGCGCCCACCGGGAAAAGCCTGAGAACATCGTGTTTATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS-3UTR CAA 90 bp GCCCTCTTGAGGCCGGTCAAGGCTGGAAACGCAGGCTGGGAACTGGCAATGGTTTCGATAAGGAGAGGTTaGCAGATGTACTCCTGGACC +
Preference number: 5 (lower is better)
Translates to: ALLRPVKAGNAGWELAMVSIRRG*QMYSWT
Trigger: GGTCCAGGAGTACATCTGCAAACCTCTCCTTATCGA...AACCATTGCCAGTTCCCAGCCTGCGTTTCCAGCCTTGACCGGCCTCAAGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487468.5
CDS-3UTR CAA 90 bp CCACCGCTGGCCTGCTCTGGAGGGTCCCTGCCAGGCGGATGTCACTGGGGTCTTATATCAAACTTGAGCTaGTCGATAAGGAGAGGTTTG +
Preference number: 5 (lower is better)
Translates to: PPLACSGGSLPGGCHWGLISNLS*SIRRGL
Trigger: CAAACCTCTCCTTATCGACAAGCTCAAGTTTGATAT...AAGACCCCAGTGACATCCGCCTGGCAGGGACCCTCCAGAGCAGGCCAGCGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474723.5
ENST00000487468.5
CDS-3UTR CAA 90 bp AGGCAGAATGCCTGGGGCGCTCCAGCCCTGAAAGCTGCTCTCGTCTTCCGTTTTTCCGAGTGGATGAAGTaGCCGCTGTGGATGTTCAGT +
Preference number: 5 (lower is better)
Translates to: RQNAWGAPALKAALVFRFSEWMK*PLWMFS
Trigger: ACTGAACATCCACAGCGGCAACTTCATCCACTCGGA...AAAACGGAAGACGAGAGCAGCTTTCAGGGCTGGAGCGCCCCAGGCATTCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CAA 90 bp TTTGCAGATGTACTCCTGGACCACCGCTGGCCTGCTCTGGAGGGTCCCTGCCAGTCAGACCAGACCTTCTaGATGTCAACGCCTTTGGAA +
Preference number: 5 (lower is better)
Translates to: FADVLLDHRWPALEGPCQSDQTF*MSTPLE
Trigger: TTCCAAAGGCGTTGACATCAAGAAGGTCTGGTCTGA...CTGGCAGGGACCCTCCAGAGCAGGCCAGCGGTGGTCCAGGAGTACATCTGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474723.5
ENST00000487468.5
CDS-3UTR CAA 90 bp CAGGCAGAATGCCTGGGGCGCTCCAGCCCTGAAAGCTGCTCTCGTCTTCCGTTTAACTGTTTTGCGTACTaGGGGAACACCTGCTTGAGG +
Preference number: 5 (lower is better)
Translates to: QAECLGRSSPESCSRLPFNCFAY*GNTCLR
Trigger: CCTCAAGCAGGTGTTCCCCAAGTACGCAAAACAGTT...AAACGGAAGACGAGAGCAGCTTTCAGGGCTGGAGCGCCCCAGGCATTCTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CAA 90 bp AGGCAGAATGCCTGGGGCGCTCCAGCCCTGAAAGCTGCTCTCGTCTTCCGTTTTAGGTACGAAAGCCTGTaGGCCCCAACTTCATTGTCC +
Preference number: 5 (lower is better)
Translates to: RQNAWGAPALKAALVFRFRYESL*APTSLS
Trigger: GGACAATGAAGTTGGGGCCAACAGGCTTTCGTACCT...AAAACGGAAGACGAGAGCAGCTTTCAGGGCTGGAGCGCCCCAGGCATTCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CAA 90 bp GTCCCGCTGGTCCAGGGTCATGGAGTTCCACCTCCGTGTGATGTCAATGTAGAGACAGATTTGCCCCAGTaGGTGCTTCCTGTGAGCCCA +
Preference number: 5 (lower is better)
Translates to: VPLVQGHGVPPPCDVNVETDLPQ*VLPVSP
Trigger: TGGGCTCACAGGAAGCACCAACTGGGGCAAATCTGT...CTCTACATTGACATCACACGGAGGTGGAACTCCATGACCCTGGACCAGCGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CAA 90 bp AGAGTGGCCCTCAGGACAGGGTATGTCTGGGATGGGAGAGCTTATTGGCACAGCGGGCCTTGGGATCGATaGTGTCCTGTGCCCCAAATA +
Preference number: 5 (lower is better)
Translates to: RVALRTGYVWDGRAYWHSGPWDR*CPVPQI
Trigger: TATTTGGGGCACAGGACACAATCGATCCCAAGGCCC...GCTGTGCCAATAAGCTCTCCCATCCCAGACATACCCTGTCCTGAGGGCCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CAA 90 bp GGAAGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCAGCGGCGGCCATGTaGGAAGAGGGCAAAGAGCCG +
Preference number: 5 (lower is better)
Translates to: GSSLPQITQGANRKLGSWAAAAM*EEGKEP
Trigger: CGGCTCTTTGCCCTCTTCCAACATGGCCGCCGCTGC...CCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS TCA 90 bp GCAAGACAAGGGTGGTGGGAAATAGCACATCCTCCTCCTGTCTCATaGCAACAGATACAAACAGTCCTGGGAGCAGGGGTCGGACAGGGG +
Preference number: 5 (lower is better)
Translates to: ARQGWWEIAHPPPVS*QQIQTVLGAGVGQG
Trigger: CCCCTGTCCGACCCCTGCTCCCAGGACTGTTTGTATCTGTTGTCATGAGACAGGAGGAGGATGTGCTATTTCCCACCACCCTTGTCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS TCA 90 bp TCACTCTGTTTGGGGGATTGCAGCGGGGACACTGGAACTGAACCTTaGAAGTCTGTTTGCCACTGGGCAGAGGAAGGCCATTCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: SLCLGDCSGDTGTEP*KSVCHWAEEGHSRQ
Trigger: CTGCCTGGAATGGCCTTCCTCTGCCCAGTGGCAAACAGACTTTCAAGGTTCAGTTCCAGTGTCCCCGCTGCAATCCCCCAAACAGAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS TCA 90 bp GAACCGCTCACTCTGTTTGGGGGATTGCAGCGGGGACACTGGAACTaGACCTTGAAAGTCTGTTTGCCACTGGGCAGAGGAAGGCCATTC +
Preference number: 5 (lower is better)
Translates to: EPLTLFGGLQRGHWN*TLKVCLPLGRGRPF
Trigger: GAATGGCCTTCCTCTGCCCAGTGGCAAACAGACTTTCAAGGTTCAGTTCCAGTGTCCCCGCTGCAATCCCCCAAACAGAGTGAGCGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 90 bp CAGGAGCTTATTTGGGATGCACCTCTGCCTCCCAGAACCCTCCCTTaGCACGCACTACGAGCATTTTCTGAGTCCTACAGTGCACCACAC +
Preference number: 5 (lower is better)
Translates to: QELIWDAPLPPRTLP*HALRAFSESYSAPH
Trigger: GTGTGGTGCACTGTAGGACTCAGAAAATGCTCGTAGTGCGTGGCAAGGGAGGGTTCTGGGAGGCAGAGGTGCATCCCAAATAAGCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 90 bp GCTTCAAACATTGTTTCTCACAATGGACCATTTAGGAGCCCTGACTaGCTTGTCCCATGCCACCAGACCATGACGGACCCCAGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: ASNIVSHNGPFRSPD*LVPCHQTMTDPRQP
Trigger: GGGCTGCCTGGGGTCCGTCATGGTCTGGTGGCATGGGACAAGGCAGTCAGGGCTCCTAAATGGTCCATTGTGAGAAACAATGTTTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 90 bp CCATTTTCTACCAAAGCTCAACGGTGCTCAGTGTGTGTGTGTGCGTaGGCACGTGTGTGCATGCGTGTGCGTGTGTGCATGTGTGTGCGT +
Preference number: 5 (lower is better)
Translates to: PFSTKAQRCSVCVCA*ARVCMRVRVCMCVR
Trigger: ACGCACACACATGCACACACGCACACGCATGCACACACGTGCGCACGCACACACACACACTGAGCACCGTTGAGCTTTGGTAGAAAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS-3UTR CAA 90 bp GATAGGTATTCTTCATTTCATTTTACAGGTAACAGAGGGGAAGTAGCTTGCCCCTGCACCGGCTTCGGCTaGGACGGGGGCAGCGTGGGC +
Preference number: 5 (lower is better)
Translates to: DRYSSFHFTGNRGEVACPCTGFG*DGGSVG
Trigger: GCCCACGCTGCCCCCGTCCAAGCCGAAGCCGGTGCA...GGGGCAAGCTACTTCCCCTCTGTTACCTGTAAAATGAAATGAAGAATACCTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR CAA 90 bp GTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCGGGAACTCCTTCCACTaGAGCTGGCGGATGCTGATC +
Preference number: 5 (lower is better)
Translates to: VACPKSHREQTESLEVGPGNSFH*SWRMLI
Trigger: GATCAGCATCCGCCAGCTCAAGTGGAAGGAGTTCCC...GGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR CAA 90 bp CCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACAGCCAGAGAGCCCTCTaGAGGCCGGTCAAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: PKSHREQTESLEVGPRFNSQRAL*RPVKAG
Trigger: TCCAGCCTTGACCGGCCTCAAGAGGGCTCTCTGGCT...GTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS TCA 90 bp CACCATTTCAAGTGTCTGGGCTCCTATCCTCCCACTCCATTCCCCTaGCTACCTACATGCACATCCGGAGGACCTGCTGGGAACTCAACA +
Preference number: 5 (lower is better)
Translates to: HHFKCLGSYPPTPFP*LPTCTSGGPAGNST
Trigger: TGTTGAGTTCCCAGCAGGTCCTCCGGATGTGCATGTAGGTAGTCAGGGGAATGGAGTGGGAGGATAGGAGCCCAGACACTTGAAATGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 90 bp AAGGAAGGAGGAGAAAGCTGCAGGAGCTTATTTGGGATGCACCTCTaGCTCCCAGAACCCTCCCTTGCCACGCACTACGAGCATTTTCTG +
Preference number: 5 (lower is better)
Translates to: KEGGESCRSLFGMHL*LPEPSLATHYEHFL
Trigger: CAGAAAATGCTCGTAGTGCGTGGCAAGGGAGGGTTCTGGGAGGCAGAGGTGCATCCCAAATAAGCTCCTGCAGCTTTCTCCTCCTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 90 bp CGTGTGTGCATGCGTGTGCATCGTGTGTGCGTGCGTGTGTGTGCATaGATGCGCGCGTGTGTGTATAAGCATTATGCTGCGTGGTTTTTC +
Preference number: 5 (lower is better)
Translates to: RVCMRVHRVCVRVCA*MRACVYKHYAAWFF
Trigger: GAAAAACCACGCAGCATAATGCTTATACACACACGCGCGCATGCATGCACACACACGCACGCACACACGATGCACACGCATGCACACACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 90 bp ACAAGGAGCCAAAGACAGACACACCTGGACCAAGTCCTGACTACATaGCCTCCTGGGCCTTCCTTTCCTCATCTGAAAGGGGAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: TRSQRQTHLDQVLTT*PPGPSFPHLKGEQH
Trigger: ATGCTGCTCCCCTTTCAGATGAGGAAAGGAAGGCCCAGGAGGCCATGTAGTCAGGACTTGGTCCAGGTGTGTCTGTCTTTGGCTCCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 90 bp CACTCCATTCCCCTGACTACCTACATGCACATCCGGAGGACCTGCTaGGAACTCAACAACCCCACACAAACTCAGGGCAATGCAGAGTTG +
Preference number: 5 (lower is better)
Translates to: HSIPLTTYMHIRRTC*ELNNPTQTQGNAEL
Trigger: CAACTCTGCATTGCCCTGAGTTTGTGTGGGGTTGTTGAGTTCCCAGCAGGTCCTCCGGATGTGCATGTAGGTAGTCAGGGGAATGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS-3UTR CAA 90 bp TACACCCATGTAGCACATGACTGGGATGGGAGATTCGCAGATGCCTACTTGATAGCTTCGGGGTTGGCGTaGCAGTCTGGAGCACTGGTC +
Preference number: 5 (lower is better)
Translates to: YTHVAHDWDGRFADAYLIASGLA*QSGALV
Trigger: GACCAGTGCTCCAGACTGCAACGCCAACCCCGAAGC...TATCAAGTAGGCATCTGCGAATCTCCCATCCCAGTCATGTGCTACATGGGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CAA 90 bp GGGGGTGGGCTCCTGATATGGCTCGGTACAAAACCTAGAGAGTCCGTCTTTGGCCTGCTGCTGCTGAGTTaGCAGCTCCTTATGAAGGTA +
Preference number: 5 (lower is better)
Translates to: GGGLLIWLGTKPRESVFGLLLLS*QLLMKV
Trigger: TACCTTCATAAGGAGCTGCAAACTCAGCAGCAGCAG...GCCAAAGACGGACTCTCTAGGTTTTGTACCGAGCCATATCAGGAGCCCACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CAA 90 bp TCCACTTCCTTCTCTCGGAACGGGCGGCAGGAAATAAACACGATGTTCTCAGGCACAGATTTGCCCCAGTaGGTGCTTCCTGTGAGCCCA +
Preference number: 5 (lower is better)
Translates to: STSFSRNGRQEINTMFSGTDLPQ*VLPVSP
Trigger: TGGGCTCACAGGAAGCACCAACTGGGGCAAATCTGT...GCCTGAGAACATCGTGTTTATTTCCTGCCGCCCGTTCCGAGAGAAGGAAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CAA 90 bp GTCGATAAGGAGAGGTTTGCAGATGTACTCCTGGACCACCGCTGGCCTGCTCTGGAGCAAACAGAAAGCTaGGAAGTTGGGCCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: VDKERFADVLLDHRWPALEQTES*EVGPRF
Trigger: AAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTC...CAGAGCAGGCCAGCGGTGGTCCAGGAGTACATCTGCAAACCTCTCCTTATCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487468.5
CDS-3UTR CAA 90 bp GTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCCAGAGGGGAAGTAGCTaGCCCCAAATCACACAGGGA +
Preference number: 5 (lower is better)
Translates to: VACPKSHREQTESLEVGPQRGSS*PQITQG
Trigger: TCCCTGTGTGATTTGGGGCAAGCTACTTCCCCTCTG...GGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS TCA 90 bp AGAAAGGGTAGGTGGGCCCAGTTCTGTGGGTCTGTCCTGTTCTCCTaGTGCTTCCCTCCCCAGATTGGTCCCACTAACTTGTCATACTTG +
Preference number: 5 (lower is better)
Translates to: RKGRWAQFCGSVLFS*CFPPQIGPTNLSYL
Trigger: CAAGTATGACAAGTTAGTGGGACCAATCTGGGGAGGGAAGCATCAGGAGAACAGGACAGACCCACAGAACTGGGCCCACCTACCCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS TCA 90 bp GATGGAAAGAAGGGAAGGGTGCCGATAAGGGCTGCTTTCAATAGGTaGCTGGACGTCAGCTCTGTGGCTCTCCAAGTTCCTTCCAGACCT +
Preference number: 5 (lower is better)
Translates to: DGKKGRVPIRAAFNR*LDVSSVALQVPSRP
Trigger: AGGTCTGGAAGGAACTTGGAGAGCCACAGAGCTGACGTCCAGTCACCTATTGAAAGCAGCCCTTATCGGCACCCTTCCCTTCTTTCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS TCA 90 bp CCAGGTGCCAAGTCCCGCACCCGGTTCTTTACATACATTACGACGTaGTCCCCACTATCTAGGCAAGGAGCAGGGATCAGAGAGGTAAAG +
Preference number: 5 (lower is better)
Translates to: PGAKSRTRFFTYITT*SPLSRQGAGIREVK
Trigger: CTTTACCTCTCTGATCCCTGCTCCTTGCCTAGATAGTGGGGATCACGTCGTAATGTATGTAAAGAACCGGGTGCGGGACTTGGCACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 90 bp GCCGGGAGAGCCATCATTTCTGAGCTTTCAGGGAAGATGCTCGTGTaGTGGCCATTGCAAGCCCAATTCTCAATTACAGGGCCAAGGAGT +
Preference number: 5 (lower is better)
Translates to: AGRAIISELSGKMLV*WPLQAQFSITGPRS
Trigger: ACTCCTTGGCCCTGTAATTGAGAATTGGGCTTGCAATGGCCAGCACACGAGCATCTTCCCTGAAAGCTCAGAAATGATGGCTCTCCCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 90 bp TGTGCATGCGTGTGCATCGTGTGTGCGTGCGTGTGTGTGCATGCATaGGCGCGTGTGTGTATAAGCATTATGCTGCGTGGTTTTTCCAGT +
Preference number: 5 (lower is better)
Translates to: CACVCIVCACVCVHA*ARVCISIMLRGFSS
Trigger: ACTGGAAAAACCACGCAGCATAATGCTTATACACACACGCGCGCATGCATGCACACACACGCACGCACACACGATGCACACGCATGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 90 bp TTTGCCATTTTCTACCAAAGCTCAACGGTGCTCAGTGTGTGTGTGTaGGTGCGCACGTGTGTGCATGCGTGTGCGTGTGTGCATGTGTGT +
Preference number: 5 (lower is better)
Translates to: FAIFYQSSTVLSVCV*VRTCVHACACVHVC
Trigger: ACACACATGCACACACGCACACGCATGCACACACGTGCGCACGCACACACACACACTGAGCACCGTTGAGCTTTGGTAGAAAATGGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS-3UTR CAA 90 bp CCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACGGGAACTCCTTCCACTaGAGCTGGCGGATGCTGATC +
Preference number: 5 (lower is better)
Translates to: PKSHREQTESLEVGPRFNGNSFH*SWRMLI
Trigger: GATCAGCATCCGCCAGCTCAAGTGGAAGGAGTTCCC...GTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR CAA 90 bp CGCGATGACCGTCTTAATCACCACGGAGATGATGTCAGACCAGACCTTCTTGATGGGAACTCCTTCCACTaGAGCTGGCGGATGCTGATC +
Preference number: 5 (lower is better)
Translates to: RDDRLNHHGDDVRPDLLDGNSFH*SWRMLI
Trigger: GATCAGCATCCGCCAGCTCAAGTGGAAGGAGTTCCC...ATCAAGAAGGTCTGGTCTGACATCATCTCCGTGGTGATTAAGACGGTCATCGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373778.5
ENST00000474723.5
ENST00000487468.5
CDS-3UTR CAA 90 bp CAGAGAGCCCTCTTGAGGCCGGTCAAGGCTGGAAACGCAGGCTGGGAACTGGCAATATCAAACTTGAGCTaGTCGATAAGGAGAGGTTTG +
Preference number: 5 (lower is better)
Translates to: QRALLRPVKAGNAGWELAISNLS*SIRRGL
Trigger: CAAACCTCTCCTTATCGACAAGCTCAAGTTTGATAT...TGCCAGTTCCCAGCCTGCGTTTCCAGCCTTGACCGGCCTCAAGAGGGCTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487468.5
CDS-3UTR CAA 90 bp TCGATAAGGAGAGGTTTGCAGATGTACTCCTGGACCACCGCTGGCCTGCTCTGGCCAAATACAACAGATTaGCCCCAGTTGGTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: SIRRGLQMYSWTTAGLLWPNTTD*PQLVLP
Trigger: AGGAAGCACCAACTGGGGCAAATCTGTTGTATTTGG...CCAGAGCAGGCCAGCGGTGGTCCAGGAGTACATCTGCAAACCTCTCCTTATCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS-3UTR CAA 90 bp ATCAAACTTGAGCTTGTCGATAAGGAGAGGTTTGCAGATGTACTCCTGGACCACAGCCAGAGAGCCCTCTaGAGGCCGGTCAAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: IKLELVDKERFADVLLDHSQRAL*RPVKAG
Trigger: TCCAGCCTTGACCGGCCTCAAGAGGGCTCTCTGGCT...GTGGTCCAGGAGTACATCTGCAAACCTCTCCTTATCGACAAGCTCAAGTTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487468.5
CDS CCA 90 bp ACCAGGCACAGTACTAGCGCCTCAAATACTTTCCTGCACCTCGCTTaGAGCACGATGACTGACTCTTCCCAGGTTCCTCAGCATCCTTTA +
Preference number: 5 (lower is better)
Translates to: TRHSTSASNTFLHLA*STMTDSSQVPQHPL
Trigger: TAAAGGATGCTGAGGAACCTGGGAAGAGTCAGTCATCGTGCTCCAAGCGAGGTGCAGGAAAGTATTTGAGGCGCTAGTACTGTGCCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 90 bp TGGTGGCTCCCAGCTGATGACAAGTGTGCCCAGACATGCTTACTCTaGTCTTTCTCTGGGAAATCCATTTGTTCTGCCAAAGGGGACTGG +
Preference number: 5 (lower is better)
Translates to: WWLPADDKCAQTCLL*SFSGKSICSAKGDW
Trigger: CCAGTCCCCTTTGGCAGAACAAATGGATTTCCCAGAGAAAGACCAGAGTAAGCATGTCTGGGCACACTTGTCATCAGCTGGGAGCCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 90 bp TTGGGGGAGCAGTCAGTGTTCTGTGGCCCAAGACTGGGTCCTGGTTaGAATCTTAGCAAACACCTTCATGTTGGAGGACATGTTTCCCGT +
Preference number: 5 (lower is better)
Translates to: LGEQSVFCGPRLGPG*NLSKHLHVGGHVSR
Trigger: ACGGGAAACATGTCCTCCAACATGAAGGTGTTTGCTAAGATTCCAACCAGGACCCAGTCTTGGGCCACAGAACACTGACTGCTCCCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS-3UTR CAA 90 bp AGTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCTCCGAGTGGATGAAGTaGCCGCTGTGGATGTTCAGT +
Preference number: 5 (lower is better)
Translates to: SSLPQITQGANRKLGSWASEWMK*PLWMFS
Trigger: ACTGAACATCCACAGCGGCAACTTCATCCACTCGGA...GGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR CAA 90 bp ATTTGCCATCCTGTCCACCAGGCGCAGGTAGTTGAACTGTTTTGCGTACTTGGGTCCGAGTGGATGAAGTaGCCGCTGTGGATGTTCAGT +
Preference number: 5 (lower is better)
Translates to: ICHPVHQAQVVELFCVLGSEWMK*PLWMFS
Trigger: ACTGAACATCCACAGCGGCAACTTCATCCACTCGGA...CCCAAGTACGCAAAACAGTTCAACTACCTGCGCCTGGTGGACAGGATGGCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CAA 90 bp CGGGCCTTGGGATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGCCCCAGTCAGACCAGACCTTCTaGATGTCAACGCCTTTGGAA +
Preference number: 5 (lower is better)
Translates to: RALGSIVSCAPNTTDLPQSDQTF*MSTPLE
Trigger: TTCCAAAGGCGTTGACATCAAGAAGGTCTGGTCTGA...CTGGGGCAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCCCAAGGCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CAA 90 bp CCCTGGAGAAAGTTCGTGCTCATGTTCGATTCTCATACTGGGATTTGCATTTACAGGTGGGCTTCGGGGTaGGCGTTGCAGTCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: PWRKFVLMFDSHTGICIYRWASG*ALQSGA
Trigger: TGCTCCAGACTGCAACGCCAACCCCGAAGCCCACCT...GTAAATGCAAATCCCAGTATGAGAATCGAACATGAGCACGAACTTTCTCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373778.5
CDS-3UTR CAA 90 bp AGGAGAGGTTTGCAGATGTACTCCTGGACCACCGCTGGCCTGCTCTGGAGGGTCATCGTCTTTCACCATTaGAACCTGGAAACTTGTTCA +
Preference number: 5 (lower is better)
Translates to: RRGLQMYSWTTAGLLWRVIVFHH*NLETCS
Trigger: TGAACAAGTTTCCAGGTTCAAATGGTGAAAGACGAT...GACCCTCCAGAGCAGGCCAGCGGTGGTCCAGGAGTACATCTGCAAACCTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474723.5
ENST00000487468.5
CDS GCA 90 bp TGTAGAGGTGTTCAGCGGATCGGCTTGGCAAGGTTTAGAAATCTGTaGTTCTTAAAGGCACCCGCAGGCAAAGTGGAGAGCAAGTGTGGT +
Preference number: 5 (lower is better)
Translates to: CRGVQRIGLARFRNL*FLKAPAGKVESKCG
Trigger: ACCACACTTGCTCTCCACTTTGCCTGCGGGTGCCTTTAAGAAGCACAGATTTCTAAACCTTGCCAAGCCGATCCGCTGAACACCTCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 90 bp GGGAGAGCCATCATTTCTGAGCTTTCAGGGAAGATGCTCGTGTGCTaGCCATTGCAAGCCCAATTCTCAATTACAGGGCCAAGGAGTAGA +
Preference number: 5 (lower is better)
Translates to: GRAIISELSGKMLVC*PLQAQFSITGPRSR
Trigger: TCTACTCCTTGGCCCTGTAATTGAGAATTGGGCTTGCAATGGCCAGCACACGAGCATCTTCCCTGAAAGCTCAGAAATGATGGCTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS-3UTR CAA 90 bp CGCGATGACCGTCTTAATCACCACGGAGATGATGTCAGACCAGACCTTCTTGATTCCGAGTGGATGAAGTaGCCGCTGTGGATGTTCAGT +
Preference number: 5 (lower is better)
Translates to: RDDRLNHHGDDVRPDLLDSEWMK*PLWMFS
Trigger: ACTGAACATCCACAGCGGCAACTTCATCCACTCGGA...ATCAAGAAGGTCTGGTCTGACATCATCTCCGTGGTGATTAAGACGGTCATCGCG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373778.5
ENST00000474723.5
ENST00000487468.5
CDS-3UTR CAA 90 bp GGAGTCAGCGCGATGACCGTCTTAATCACCACGGAGATGATGTCAGACCAGACCTTGATGTCAACGCCTTaGGAAGACAGTCTACAAAGG +
Preference number: 5 (lower is better)
Translates to: GVSAMTVLITTEMMSDQTLMSTP*EDSLQR
Trigger: CCTTTGTAGACTGTCTTCCAAAGGCGTTGACATCAA...GGTCTGGTCTGACATCATCTCCGTGGTGATTAAGACGGTCATCGCGCTGACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373778.5
ENST00000474723.5
ENST00000487468.5
CDS-3UTR CAA 90 bp GTAGCTTGCCCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCTCAGACCAGACCTTCTaGATGTCAACGCCTTTGGAA +
Preference number: 5 (lower is better)
Translates to: VACPKSHREQTESLEVGPSDQTF*MSTPLE
Trigger: TTCCAAAGGCGTTGACATCAAGAAGGTCTGGTCTGA...GGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGGGCAAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR CAA 90 bp GAGCACTGGTCAGCTCGCCGTCCAAAGCATCTTCCTTTCCAGCGAATGGTTTTTAACTGTTTTGCGTACTaGGGGAACACCTGCTTGAGG +
Preference number: 5 (lower is better)
Translates to: EHWSARRPKHLPFQRMVFNCFAY*GNTCLR
Trigger: CCTCAAGCAGGTGTTCCCCAAGTACGCAAAACAGTT...AAAAACCATTCGCTGGAAAGGAAGATGCTTTGGACGGCGAGCTGACCAGTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS CCA 90 bp TCAACTGCTCTTATCAGTTTGGGTCAGGAGTCAGGGACAGGATGTTaGAAGGAAGGAGGAGAAAGCTGCAGGAGCTTATTTGGGATGCAC +
Preference number: 5 (lower is better)
Translates to: STALISLGQESGTGC*KEGGESCRSLFGMH
Trigger: GTGCATCCCAAATAAGCTCCTGCAGCTTTCTCCTCCTTCCTTCCAACATCCTGTCCCTGACTCCTGACCCAAACTGATAAGAGCAGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 90 bp CTGGGAAATCCATTTGTTCTGCCAAAGGGGACTGGGAGAGCTGCATaGGGGCTTCAAACATTGTTTCTCACAATGGACCATTTAGGAGCC +
Preference number: 5 (lower is better)
Translates to: LGNPFVLPKGTGRAA*GLQTLFLTMDHLGA
Trigger: GGCTCCTAAATGGTCCATTGTGAGAAACAATGTTTGAAGCCCCCATGCAGCTCTCCCAGTCCCCTTTGGCAGAACAAATGGATTTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS-3UTR CAA 90 bp CAGCTCCGGGCCTTGGGATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGAAGGGGTCTAAGGACTaGAGTAAGACATACAGACGA +
Preference number: 5 (lower is better)
Translates to: QLRALGSIVSCAPNTTDLKGSKD*SKTYRR
Trigger: TCGTCTGTATGTCTTACTCAAGTCCTTAGACCCCTT...CAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCCCAAGGCCCGGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CAA 90 bp CACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACACCCAAGCCAAGGGGTCTAAGGACTaGAGTAAGACATACAGACGA +
Preference number: 5 (lower is better)
Translates to: HREQTESLEVGPRFNTQAKGSKD*SKTYRR
Trigger: TCGTCTGTATGTCTTACTCAAGTCCTTAGACCCCTT...GGCTTGGGTGTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR CAA 90 bp CTGGGATGGGAGATTCGCAGATGCCTACTTGATATTTCCACTTCCTTCTCTCGGAACTTCATTGTCCCCTaGATGCCCAGGAACCGGATA +
Preference number: 5 (lower is better)
Translates to: LGWEIRRCLLDISTSFSRNFIVP*MPRNRI
Trigger: TATCCGGTTCCTGGGCATCAAGGGGACAATGAAGTT...CCGAGAGAAGGAAGTGGAAATATCAAGTAGGCATCTGCGAATCTCCCATCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CAA 90 bp TGTCCGATGACTGATGACTCAGAAACAGGGTGTATCACCAGGAGGTGTGAGGAGTCGATAAGGAGAGGTTaGCAGATGTACTCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: CPMTDDSETGCITRRCEESIRRG*QMYSPQ
Trigger: CTGAGGAGAGTACATCTGCAAACCTCTCCTTATCGA...CTCCTCACACCTCCTGGTGATACACCCTGTTTCTGAGTCATCAGTCATCGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373778.5
CDS TCA 90 bp CCGTGGTCATTTAGGCAGAGCGCAACAGATAGAACAAAGTGCATATaGAGGTCTGACTGCAAAGCCCTCGCTTTTCCAGAACAGTTCACG +
Preference number: 5 (lower is better)
Translates to: PWSFRQSATDRTKCI*RSDCKALAFPEQFT
Trigger: CGTGAACTGTTCTGGAAAAGCGAGGGCTTTGCAGTCAGACCTTCATATGCACTTTGTTCTATCTGTTGCGCTCTGCCTAAATGACCACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 90 bp CCATCATTTCTGAGCTTTCAGGGAAGATGCTCGTGTGCTGGCCATTaGAAGCCCAATTCTCAATTACAGGGCCAAGGAGTAGAGGACATT +
Preference number: 5 (lower is better)
Translates to: PSFLSFQGRCSCAGH*KPNSQLQGQGVEDI
Trigger: AATGTCCTCTACTCCTTGGCCCTGTAATTGAGAATTGGGCTTGCAATGGCCAGCACACGAGCATCTTCCCTGAAAGCTCAGAAATGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 90 bp GACCCTTCCTTTTCTCGACAGACATGTATTAAGACACTTCCCAGGTaGCAAGTCCCGCACCCGGTTCTTTACATACATTACGACGTGATC +
Preference number: 5 (lower is better)
Translates to: DPSFSRQTCIKTLPR*QVPHPVLYIHYDVI
Trigger: GATCACGTCGTAATGTATGTAAAGAACCGGGTGCGGGACTTGGCACCTGGGAAGTGTCTTAATACATGTCTGTCGAGAAAAGGAAGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 90 bp CTCTGGTCTTTCTCTGGGAAATCCATTTGTTCTGCCAAAGGGGACTaGGAGAGCTGCATGGGGGCTTCAAACATTGTTTCTCACAATGGA +
Preference number: 5 (lower is better)
Translates to: LWSFSGKSICSAKGD*ESCMGASNIVSHNG
Trigger: TCCATTGTGAGAAACAATGTTTGAAGCCCCCATGCAGCTCTCCCAGTCCCCTTTGGCAGAACAAATGGATTTCCCAGAGAAAGACCAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS-3UTR CAA 90 bp GCAGATGCCTACTTGATATTTCCACTTCCTTCTCTCGGAACGGGCGGCAGGAAATTGATGTCAACGCCTTaGGAAGACAGTCTACAAAGG +
Preference number: 5 (lower is better)
Translates to: ADAYLIFPLPSLGTGGRKLMSTP*EDSLQR
Trigger: CCTTTGTAGACTGTCTTCCAAAGGCGTTGACATCAA...TTTCCTGCCGCCCGTTCCGAGAGAAGGAAGTGGAAATATCAAGTAGGCATCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CAA 90 bp CCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACAGAGCAAACAGAAAGCTaGGAAGTTGGGCCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: PNHTGSKQKAWKLGPGLTEQTES*EVGPRF
Trigger: AAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTC...TGTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS GCA 90 bp TTCTCTGGGAAATCCATTTGTTCTGCCAAAGGGGACTGGGAGAGCTaGATGGGGGCTTCAAACATTGTTTCTCACAATGGACCATTTAGG +
Preference number: 5 (lower is better)
Translates to: FSGKSICSAKGDWES*MGASNIVSHNGPFR
Trigger: CCTAAATGGTCCATTGTGAGAAACAATGTTTGAAGCCCCCATGCAGCTCTCCCAGTCCCCTTTGGCAGAACAAATGGATTTCCCAGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS-3UTR CAA 90 bp GTGTCCTGTGCCCCAAATACAACAGATTTGCCCCAGTTGGTGCTTCCTGTGAGCTGGAAACTTGTTCACTaGACCGGAGAATATGTCATT +
Preference number: 5 (lower is better)
Translates to: VSCAPNTTDLPQLVLPVSWKLVH*TGEYVI
Trigger: AATGACATATTCTCCGGTCAAGTGAACAAGTTTCCA...GCTCACAGGAAGCACCAACTGGGGCAAATCTGTTGTATTTGGGGCACAGGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CAA 90 bp CAGCTCCGGGCCTTGGGATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTGTGGAAACTTGTTCACTaGACCGGAGAATATGTCATT +
Preference number: 5 (lower is better)
Translates to: QLRALGSIVSCAPNTTDLWKLVH*TGEYVI
Trigger: AATGACATATTCTCCGGTCAAGTGAACAAGTTTCCA...CAAATCTGTTGTATTTGGGGCACAGGACACAATCGATCCCAAGGCCCGGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CAA 90 bp TCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACACCCAATTGATGTCAACGCCTTaGGAAGACAGTCTACAAAGG +
Preference number: 5 (lower is better)
Translates to: SHREQTESLEVGPRFNTQLMSTP*EDSLQR
Trigger: CCTTTGTAGACTGTCTTCCAAAGGCGTTGACATCAA...TTGGGTGTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR CAA 90 bp GTCATATGTCCGATGACTGATGACTCAGAAACAGGGTGTATCACCAGGAGGTGTTCAGACCAGACCTTCTaGATGTCAACGCCTTTGGAA +
Preference number: 5 (lower is better)
Translates to: VICPMTDDSETGCITRRCSDQTF*MSTPLE
Trigger: TTCCAAAGGCGTTGACATCAAGAAGGTCTGGTCTGA...ACACCTCCTGGTGATACACCCTGTTTCTGAGTCATCAGTCATCGGACATATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS-3UTR CAA 90 bp ATCAAACTTGAGCTTGTCGATAAGGAGAGGTTTGCAGATGTACTCCTGGACCACCTGCTGCTGCTGAGTTaGCAGCTCCTTATGAAGGTA +
Preference number: 5 (lower is better)
Translates to: IKLELVDKERFADVLLDHLLLLS*QLLMKV
Trigger: TACCTTCATAAGGAGCTGCAAACTCAGCAGCAGCAG...GTGGTCCAGGAGTACATCTGCAAACCTCTCCTTATCGACAAGCTCAAGTTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474723.5
CDS TCA 90 bp TGGAAACTTGTTCACTTGACCGGAGAATATGTCATTGTCGTGAAATaGAACTCCATGCCAGTAGATGTCACAAGGCAAGCGCCGGCCAAA +
Preference number: 5 (lower is better)
Translates to: WKLVHLTGEYVIVVK*NSMPVDVTRQAPAK
Trigger: TTTGGCCGGCGCTTGCCTTGTGACATCTACTGGCATGGAGTTTCATTTCACGACAATGACATATTCTCCGGTCAAGTGAACAAGTTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000373778.5
ENST00000474723.5
ENST00000487468.5
CDS-3UTR CAA 90 bp ACTTTGAGCTCTGGAGTCAGCGCGATGACCGTCTTAATCACCACGGAGATGATGTGGAAACTTGTTCACTaGACCGGAGAATATGTCATT +
Preference number: 5 (lower is better)
Translates to: TLSSGVSAMTVLITTEMMWKLVH*TGEYVI
Trigger: AATGACATATTCTCCGGTCAAGTGAACAAGTTTCCA...CATCATCTCCGTGGTGATTAAGACGGTCATCGCGCTGACTCCAGAGCTCAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373778.5
ENST00000474723.5
ENST00000487468.5
CDS-3UTR CAA 90 bp CCCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACATCGTCTTTCACCATTaGAACCTGAGCAACAAAGAG +
Preference number: 5 (lower is better)
Translates to: PKSHREQTESLEVGPRFNIVFHH*NLSNKE
Trigger: CTCTTTGTTGCTCAGGTTCAAATGGTGAAAGACGAT...GTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS-3UTR CAA 90 bp ACTTTGAGCTCTGGAGTCAGCGCGATGACCGTCTTAATCACCACGGAGATGATGATATCAAACTTGAGCTaGTCGATAAGGAGAGGTTTG +
Preference number: 5 (lower is better)
Translates to: TLSSGVSAMTVLITTEMMISNLS*SIRRGL
Trigger: CAAACCTCTCCTTATCGACAAGCTCAAGTTTGATAT...CATCATCTCCGTGGTGATTAAGACGGTCATCGCGCTGACTCCAGAGCTCAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373778.5
ENST00000474723.5
ENST00000487468.5
CDS-3UTR CAA 90 bp CCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACAAAGGGGTCTAAGGACTaGAGTAAGACATACAGACGA +
Preference number: 5 (lower is better)
Translates to: PNHTGSKQKAWKLGPGLTKGSKD*SKTYRR
Trigger: TCGTCTGTATGTCTTACTCAAGTCCTTAGACCCCTT...TGTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS TCA 90 bp ATCTGGGGAGGGCGGATTCAAGTAACTTGTTTCCACAGATGCTTTTaGGTACCTGTTATGAACCAGGTCAACTGCTCTTATCAGTTTGGG +
Preference number: 5 (lower is better)
Translates to: IWGGRIQVTCFHRCF*VPVMNQVNCSYQFG
Trigger: CCCAAACTGATAAGAGCAGTTGACCTGGTTCATAACAGGTACTCAAAAGCATCTGTGGAAACAAGTTACTTGAATCCGCCCTCCCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS TCA 90 bp ACTCATTCTGACAATGGAGCAGCCTCGAAATGCTTTCAGTTAAACTaGAAAGGGCCAATCTGTCAGGACTGGCCTCTCATAAAACCACAG +
Preference number: 5 (lower is better)
Translates to: THSDNGAASKCFQLN*KGPICQDWPLIKPQ
Trigger: CTGTGGTTTTATGAGAGGCCAGTCCTGACAGATTGGCCCTTTTCAGTTTAACTGAAAGCATTTCGAGGCTGCTCCATTGTCAGAATGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS-3UTR CAA 90 bp GATAGGTATTCTTCATTTCATTTTACAGGTAACAGAGGGGAAGTAGCTTGCCCCTCGATAAGGAGAGGTTaGCAGATGTACTCCTGGACC +
Preference number: 5 (lower is better)
Translates to: DRYSSFHFTGNRGEVACPSIRRG*QMYSWT
Trigger: GGTCCAGGAGTACATCTGCAAACCTCTCCTTATCGA...GGGGCAAGCTACTTCCCCTCTGTTACCTGTAAAATGAAATGAAGAATACCTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR CAA 90 bp TCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACACCCAAATATCAAACTTGAGCTaGTCGATAAGGAGAGGTTTG +
Preference number: 5 (lower is better)
Translates to: SHREQTESLEVGPRFNTQISNLS*SIRRGL
Trigger: CAAACCTCTCCTTATCGACAAGCTCAAGTTTGATAT...TTGGGTGTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR CAA 90 bp CCAAATCACACAGGGAGCAAACAGAAAGCTTGGAAGTTGGGCCCAGGTTTAACATGGAAACTTGTTCACTaGACCGGAGAATATGTCATT +
Preference number: 5 (lower is better)
Translates to: PNHTGSKQKAWKLGPGLTWKLVH*TGEYVI
Trigger: AATGACATATTCTCCGGTCAAGTGAACAAGTTTCCA...TGTTAAACCTGGGCCCAACTTCCAAGCTTTCTGTTTGCTCCCTGTGTGATTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373776.5
ENST00000487468.5
CDS-3UTR CAA 90 bp ATCACCACGGAGATGATGTCAGACCAGACCTTCTTGATGTCAACGCCTTTGGAAATCGTCTTTCACCATTaGAACCTGGAAACTTGTTCA +
Preference number: 5 (lower is better)
Translates to: ITTEMMSDQTFLMSTPLEIVFHH*NLETCS
Trigger: TGAACAAGTTTCCAGGTTCAAATGGTGAAAGACGAT...TTCCAAAGGCGTTGACATCAAGAAGGTCTGGTCTGACATCATCTCCGTGGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474723.5
ENST00000487468.5
CDS-3UTR CAA 90 bp TGCTCATGTTCGATTCTCATACTGGGATTTGCATTTACTTCAAGTAGTATAGGCAACTTCATTGTCCCCTaGATGCCCAGGAACCGGATA +
Preference number: 5 (lower is better)
Translates to: CSCSILILGFAFTSSSIGNFIVP*MPRNRI
Trigger: TATCCGGTTCCTGGGCATCAAGGGGACAATGAAGTT...GCCTATACTACTTGAAGTAAATGCAAATCCCAGTATGAGAATCGAACATGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373778.5
ENST00000474723.5
CDS GCA 72 bp CTCCGCCGCCCCAGTCCGCCACCAAACTGCCGCCGCTaGAGCCGCTGCCACGCGTTCCCCGCCCGAGCCCGT +
Preference number: 6 (lower is better)
Translates to: LRRPSPPPNCRR*SRCHAFPARAR
Trigger: ACGGGCTCGGGCGGGGAACGCGTGGCAGCGGCTGCAGCGGCGGCAGTTTGGTGGCGGACTGGGGCGGCGGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000474723.5
CDS GCA 72 bp CCGCCAGCTCGCTCTCGGAGCTGCCCCGCCGCATGGTaGTCAGGGCCGGGGCCAGTGCCAGTGCCACCGCCG +
Preference number: 6 (lower is better)
Translates to: PPARSRSCPAAW*SGPGPVPVPPP
Trigger: CGGCGGTGGCACTGGCACTGGCCCCGGCCCTGAGCACCATGCGGCGGGGCAGCTCCGAGAGCGAGCTGGCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000474723.5
CDS GCA 72 bp CCCTTGTCCCGGGGCTTCCCGTGCGGGCAGAGGCCCTaGACCGGCTTCGGCTTGGACGGGGGCAGCGTGGGC +
Preference number: 6 (lower is better)
Translates to: PLSRGFPCGQRP*TGFGLDGGSVG
Trigger: GCCCACGCTGCCCCCGTCCAAGCCGAAGCCGGTGCAGGGCCTCTGCCCGCACGGGAAGCCCCGGGACAAGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000474723.5
CDS CCA 72 bp TCCCGTGCGGGCAGAGGCCCTGCACCGGCTTCGGCTTaGACGGGGGCAGCGTGGGCGGCGGCCGCTGAAGGA +
Preference number: 6 (lower is better)
Translates to: SRAGRGPAPASA*TGAAWAAAAEG
Trigger: TCCTTCAGCGGCCGCCGCCCACGCTGCCCCCGTCCAAGCCGAAGCCGGTGCAGGGCCTCTGCCCGCACGGGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000474723.5
CDS CCA 72 bp CCGCCACCGTCTCCGCTGTGGCCTCGGCCTCAGCTTTaGCCGCCGCTTTGGCCGCAGCCACCGCCTCCGCCT +
Preference number: 6 (lower is better)
Translates to: PPPSPLWPRPQL*PPLWPQPPPPP
Trigger: AGGCGGAGGCGGTGGCTGCGGCCAAAGCGGCGGCCAAAGCTGAGGCCGAGGCCACAGCGGAGACGGTGGCGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000474723.5
CDS CCA 72 bp GGCCCTGCACCGGCTTCGGCTTGGACGGGGGCAGCGTaGGCGGCGGCCGCTGAAGGACCTGGGTGTTCCCCT +
Preference number: 6 (lower is better)
Translates to: GPAPASAWTGAA*AAAAEGPGCSP
Trigger: AGGGGAACACCCAGGTCCTTCAGCGGCCGCCGCCCACGCTGCCCCCGTCCAAGCCGAAGCCGGTGCAGGGCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000474723.5
CDS CAA 72 bp TCCGCCACCGTCTCCGCTGTGGCCTCGGCCTCAGCTTaGGCCGCCGCTTTGGCCGCAGCCACCGCCTCCGCC +
Preference number: 6 (lower is better)
Translates to: SATVSAVASASA*AAALAAATASA
Trigger: GGCGGAGGCGGTGGCTGCGGCCAAAGCGGCGGCCAAAGCTGAGGCCGAGGCCACAGCGGAGACGGTGGCGGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000474723.5
CDS CAA 90 bp CGGACCTGTTCCGCCACCGTCTCCGCTGTGGCCTCGGCCTCAGCTTaGGCCGCCGCTTTGGCCGCAGCCACCGCCTCCGCCTCCCACCGG +
Preference number: 6 (lower is better)
Translates to: RTCSATVSAVASASA*AAALAAATASASHR
Trigger: CCGGTGGGAGGCGGAGGCGGTGGCTGCGGCCAAAGCGGCGGCCAAAGCTGAGGCCGAGGCCACAGCGGAGACGGTGGCGGAACAGGTCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000474723.5
CDS CAA 90 bp GGCCGCTGGGAGCCGTTCTCGCCGGAACCGTGGCCCGAGCTCCGCTaGCAGCTTCGGCCCTTGTCCCGGGGCTTCCCGTGCGGGCAGAGG +
Preference number: 6 (lower is better)
Translates to: GRWEPFSPEPWPELR*QLRPLSRGFPCGQR
Trigger: CCTCTGCCCGCACGGGAAGCCCCGGGACAAGGGCCGAAGCTGCAAGCGGAGCTCGGGCCACGGTTCCGGCGAGAACGGCTCCCAGCGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000474723.5
CDS CAA 72 bp GAACCGTGGCCCGAGCTCCGCTTGCAGCTTCGGCCCTaGTCCCGGGGCTTCCCGTGCGGGCAGAGGCCCTGC +
Preference number: 6 (lower is better)
Translates to: EPWPELRLQLRP*SRGFPCGQRPC
Trigger: GCAGGGCCTCTGCCCGCACGGGAAGCCCCGGGACAAGGGCCGAAGCTGCAAGCGGAGCTCGGGCCACGGTTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000474723.5
CDS CAA 90 bp TTCTCGCCGGAACCGTGGCCCGAGCTCCGCTTGCAGCTTCGGCCCTaGTCCCGGGGCTTCCCGTGCGGGCAGAGGCCCTGCACCGGCTTC +
Preference number: 6 (lower is better)
Translates to: FSPEPWPELRLQLRP*SRGFPCGQRPCTGF
Trigger: GAAGCCGGTGCAGGGCCTCTGCCCGCACGGGAAGCCCCGGGACAAGGGCCGAAGCTGCAAGCGGAGCTCGGGCCACGGTTCCGGCGAGAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000474723.5
CDS GCA 72 bp CCCAGTCCGCCACCAAACTGCCGCCGCTGCAGCCGCTaGCACGCGTTCCCCGCCCGAGCCCGTTGCCATGAT +
Preference number: 6 (lower is better)
Translates to: PSPPPNCRRCSR*HAFPARARCHD
Trigger: ATCATGGCAACGGGCTCGGGCGGGGAACGCGTGGCAGCGGCTGCAGCGGCGGCAGTTTGGTGGCGGACTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000474723.5
CDS GCA 72 bp CGCTTGCAGCTTCGGCCCTTGTCCCGGGGCTTCCCGTaGGGGCAGAGGCCCTGCACCGGCTTCGGCTTGGAC +
Preference number: 6 (lower is better)
Translates to: RLQLRPLSRGFP*GQRPCTGFGLD
Trigger: GTCCAAGCCGAAGCCGGTGCAGGGCCTCTGCCCGCACGGGAAGCCCCGGGACAAGGGCCGAAGCTGCAAGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000474723.5
CDS GCA 72 bp AGCCGTTCTCGCCGGAACCGTGGCCCGAGCTCCGCTTaGAGCTTCGGCCCTTGTCCCGGGGCTTCCCGTGCG +
Preference number: 6 (lower is better)
Translates to: SRSRRNRGPSSA*SFGPCPGASRA
Trigger: CGCACGGGAAGCCCCGGGACAAGGGCCGAAGCTGCAAGCGGAGCTCGGGCCACGGTTCCGGCGAGAACGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000474723.5
CDS GCA 72 bp GGGCAAAGAGCCGCCAGGACCCGCCCACCCCGCGGATaGGCTGGATCTCGAGGGCGCAGAACTCGGAGTGGC +
Preference number: 6 (lower is better)
Translates to: GQRAARTRPPRG*AGSRGRRTRSG
Trigger: GCCACTCCGAGTTCTGCGCCCTCGAGATCCAGCGCATCCGCGGGGTGGGCGGGTCCTGGCGGCTCTTTGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS CCA 72 bp CGTCCACGCGGACCTGTTCCGCCACCGTCTCCGCTGTaGCCTCGGCCTCAGCTTTGGCCGCCGCTTTGGCCG +
Preference number: 6 (lower is better)
Translates to: RPRGPVPPPSPL*PRPQLWPPLWP
Trigger: CGGCCAAAGCGGCGGCCAAAGCTGAGGCCGAGGCCACAGCGGAGACGGTGGCGGAACAGGTCCGCGTGGACG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000474723.5
CDS CCA 72 bp GTGACCGGCCGCTGGGAGCCGTTCTCGCCGGAACCGTaGCCCGAGCTCCGCTTGCAGCTTCGGCCCTTGTCC +
Preference number: 6 (lower is better)
Translates to: VTGRWEPFSPEP*PELRLQLRPLS
Trigger: GGACAAGGGCCGAAGCTGCAAGCGGAGCTCGGGCCACGGTTCCGGCGAGAACGGCTCCCAGCGGCCGGTCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000474723.5
CDS CCA 72 bp GTCCTGGCCTTGGAGCTGTCCACGGTGACCGGCCGCTaGGAGCCGTTCTCGCCGGAACCGTGGCCCGAGCTC +
Preference number: 6 (lower is better)
Translates to: VLALELSTVTGR*EPFSPEPWPEL
Trigger: GAGCTCGGGCCACGGTTCCGGCGAGAACGGCTCCCAGCGGCCGGTCACCGTGGACAGCTCCAAGGCCAGGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000373778.5
ENST00000474723.5
CDS CAA 72 bp GAGCCGTTCTCGCCGGAACCGTGGCCCGAGCTCCGCTaGCAGCTTCGGCCCTTGTCCCGGGGCTTCCCGTGC +
Preference number: 6 (lower is better)
Translates to: EPFSPEPWPELR*QLRPLSRGFPC
Trigger: GCACGGGAAGCCCCGGGACAAGGGCCGAAGCTGCAAGCGGAGCTCGGGCCACGGTTCCGGCGAGAACGGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000474723.5
CDS TCA 72 bp CCGCTGCCACGCGTTCCCCGCCCGAGCCCGTTGCCATaGTCGCTCAGGCTCGGGTTGACAGCGGCAGTCACC +
Preference number: 6 (lower is better)
Translates to: PLPRVPRPSPLP*SLRLGLTAAVT
Trigger: GGTGACTGCCGCTGTCAACCCGAGCCTGAGCGATCATGGCAACGGGCTCGGGCGGGGAACGCGTGGCAGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS CAA 90 bp GCTGCCCACGTGACCCTGCCTGTCACAGAGGCAGCGGCGGCCATGTaGGAAGAGGGCAAAGAGCCGCCAGGACCCGCCCACCCCGCGGAT +
Preference number: 6 (lower is better)
Translates to: AAHVTLPVTEAAAAM*EEGKEPPGPAHPAD
Trigger: ATCCGCGGGGTGGGCGGGTCCTGGCGGCTCTTTGCCCTCTTCCAACATGGCCGCCGCTGCCTCTGTGACAGGCAGGGTCACGTGGGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS TCA 72 bp GCCCGAGCCCGTTGCCATGATCGCTCAGGCTCGGGTTaGCAGCGGCAGTCACCGCATCGAGACGGGGTCCGG +
Preference number: 6 (lower is better)
Translates to: ARARCHDRSGSG*QRQSPHRDGVR
Trigger: CCGGACCCCGTCTCGATGCGGTGACTGCCGCTGTCAACCCGAGCCTGAGCGATCATGGCAACGGGCTCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS CAA 90 bp AGCTGGCGGATGCTGATCTTCAGGGCATCCAGGGAGGTCCTGGCCTaGGAGCTGTCCACGGTGACCGGCCGCTGGGAGCCGTTCTCGCCG +
Preference number: 6 (lower is better)
Translates to: SWRMLIFRASREVLA*ELSTVTGRWEPFSP
Trigger: CGGCGAGAACGGCTCCCAGCGGCCGGTCACCGTGGACAGCTCCAAGGCCAGGACCTCCCTGGATGCCCTGAAGATCAGCATCCGCCAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000373778.5
ENST00000474723.5
CDS CCA 72 bp CGGATGCGCTGGATCTCGAGGGCGCAGAACTCGGAGTaGCGAGGAGAAGCGGGAGGGCAGATTGAGCGCGCG +
Preference number: 6 (lower is better)
Translates to: RMRWISRAQNSE*RGEAGGQIERA
Trigger: CGCGCGCTCAATCTGCCCTCCCGCTTCTCCTCGCCACTCCGAGTTCTGCGCCCTCGAGATCCAGCGCATCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS CAA 72 bp GTGACCCTGCCTGTCACAGAGGCAGCGGCGGCCATGTaGGAAGAGGGCAAAGAGCCGCCAGGACCCGCCCAC +
Preference number: 6 (lower is better)
Translates to: VTLPVTEAAAAM*EEGKEPPGPAH
Trigger: GTGGGCGGGTCCTGGCGGCTCTTTGCCCTCTTCCAACATGGCCGCCGCTGCCTCTGTGACAGGCAGGGTCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373776.5
CDS GCA 72 bp CAGCAAAGCACAGGGGCTGCCCAGCTATGTGTGCCGTaGCTCTGGGCCAGCCAGACTCCCGGCTCTACTTCC +
Preference number: 6 (lower is better)
Translates to: QQSTGAAQLCVP*LWASQTPGSTS
Trigger: GGAAGTAGAGCCGGGAGTCTGGCTGGCCCAGAGGCACGGCACACATAGCTGGGCAGCCCCTGTGCTTTGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 72 bp TCCTGCAGCAAAGCACAGGGGCTGCCCAGCTATGTGTaGCGTGCCTCTGGGCCAGCCAGACTCCCGGCTCTA +
Preference number: 6 (lower is better)
Translates to: SCSKAQGLPSYV*RASGPARLPAL
Trigger: TAGAGCCGGGAGTCTGGCTGGCCCAGAGGCACGGCACACATAGCTGGGCAGCCCCTGTGCTTTGCTGCAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 72 bp CAGCAAGCACCTGCTGGCCCCTGCTCTGTGCCAACGTaGACCCAGCACATGCCTGACCCTGCAGGAACGCAC +
Preference number: 6 (lower is better)
Translates to: QQAPAGPCSVPT*TQHMPDPAGTH
Trigger: GTGCGTTCCTGCAGGGTCAGGCATGTGCTGGGTCCACGTTGGCACAGAGCAGGGGCCAGCAGGTGCTTGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 72 bp ATGGGAGGGGGTGCCCATGGGTACGCAGCCCAGGCCTaGCCACAAAGGGCCATGGAGAGACACCTAGAGTCG +
Preference number: 6 (lower is better)
Translates to: MGGGAHGYAAQA*PQRAMERHLES
Trigger: CGACTCTAGGTGTCTCTCCATGGCCCTTTGTGGCCAGGCCTGGGCTGCGTACCCATGGGCACCCCCTCCCAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 72 bp GATCCCTCCGTGCGAGGAGGACAGCGCTCTCAGCCATaGGGAATGCCAGCTCCCTGCCGGGAGAGCCATCAT +
Preference number: 6 (lower is better)
Translates to: DPSVRGGQRSQP*GMPAPCRESHH
Trigger: ATGATGGCTCTCCCGGCAGGGAGCTGGCATTCCCCATGGCTGAGAGCGCTGTCCTCCTCGCACGGAGGGATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 72 bp AGGGATGGGGCTTATCCTGCAGCAAAGCACAGGGGCTaGCCAGCTATGTGTGCCGTGCCTCTGGGCCAGCCA +
Preference number: 6 (lower is better)
Translates to: RDGAYPAAKHRG*PAMCAVPLGQP
Trigger: TGGCTGGCCCAGAGGCACGGCACACATAGCTGGGCAGCCCCTGTGCTTTGCTGCAGGATAAGCCCCATCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 72 bp GGGCGGAGCAGCCCGCCTCCAGATGATGGCATGGGGTaGGAGAGGCCCTCACCAGGAGAGCTGATGTTTTCA +
Preference number: 6 (lower is better)
Translates to: GRSSPPPDDGMG*ERPSPGELMFS
Trigger: TGAAAACATCAGCTCTCCTGGTGAGGGCCTCTCCCACCCCATGCCATCATCTGGAGGCGGGCTGCTCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 72 bp AGCACATGCCTGACCCTGCAGGAACGCACAGCTGGGTaGGAACCAATGCTGTGGTCCCACAGTGCGCGCGAC +
Preference number: 6 (lower is better)
Translates to: STCLTLQERTAG*EPMLWSHSARD
Trigger: GTCGCGCGCACTGTGGGACCACAGCATTGGTTCCCACCCAGCTGTGCGTTCCTGCAGGGTCAGGCATGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 72 bp ACCCAGCACATGCCTGACCCTGCAGGAACGCACAGCTaGGTGGGAACCAATGCTGTGGTCCCACAGTGCGCG +
Preference number: 6 (lower is better)
Translates to: TQHMPDPAGTHS*VGTNAVVPQCA
Trigger: CGCGCACTGTGGGACCACAGCATTGGTTCCCACCCAGCTGTGCGTTCCTGCAGGGTCAGGCATGTGCTGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS TCA 72 bp AGAGAGCGGGAGGGAGAAGACGCTGGAGATGGATCCTaGGGGCGCTTGCAGGGATGGGGCTTATCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: REREGEDAGDGS*GRLQGWGLSCS
Trigger: GCTGCAGGATAAGCCCCATCCCTGCAAGCGCCCTCAGGATCCATCTCCAGCGTCTTCTCCCTCCCGCTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 72 bp CCTGGTGTCCTGTCTGTGAGATTGAATGGGAGGGGGTaGCCATGGGTACGCAGCCCAGGCCTGGCCACAAAG +
Preference number: 6 (lower is better)
Translates to: PGVLSVRLNGRG*PWVRSPGLATK
Trigger: CTTTGTGGCCAGGCCTGGGCTGCGTACCCATGGGCACCCCCTCCCATTCAATCTCACAGACAGGACACCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 72 bp GGCTGGCTAGCCGGCTGGAGGGGTGTTGGTGAGGACTaGCCAGCCTGGTGTCCTGTCTGTGAGATTGAATGG +
Preference number: 6 (lower is better)
Translates to: GWLAGWRGVGED*PAWCPVCEIEW
Trigger: CCATTCAATCTCACAGACAGGACACCAGGCTGGGCAGTCCTCACCAACACCCCTCCAGCCGGCTAGCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 72 bp TGCTGGGCATGCAGGGACCCCTGGCAGTGCTTGTTGTaGACACGCTGGCCACATGACCAGCACCCCACCTAT +
Preference number: 6 (lower is better)
Translates to: CWACRDPWQCLL*TRWPHDQHPTY
Trigger: ATAGGTGGGGTGCTGGTCATGTGGCCAGCGTGTCCACAACAAGCACTGCCAGGGGTCCCTGCATGCCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 72 bp GACCTCCAGGAGCCTCCGCTGTCAGGGGCGTGGAGGTaGGCAGACGTATTTCCTGGCATCCGTCTTGTTTCC +
Preference number: 6 (lower is better)
Translates to: DLQEPPLSGAWR*ADVFPGIRLVS
Trigger: GGAAACAAGACGGATGCCAGGAAATACGTCTGCCCACCTCCACGCCCCTGACAGCGGAGGCTCCTGGAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 72 bp TCACCAGACCTCCAGGAGCCTCCGCTGTCAGGGGCGTaGAGGTGGGCAGACGTATTTCCTGGCATCCGTCTT +
Preference number: 6 (lower is better)
Translates to: SPDLQEPPLSGA*RWADVFPGIRL
Trigger: AAGACGGATGCCAGGAAATACGTCTGCCCACCTCCACGCCCCTGACAGCGGAGGCTCCTGGAGGTCTGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 72 bp AATGGACCATTTAGGAGCCCTGACTGCCTTGTCCCATaGCACCAGACCATGACGGACCCCAGGCAGCCCCGA +
Preference number: 6 (lower is better)
Translates to: NGPFRSPDCLVP*HQTMTDPRQPR
Trigger: TCGGGGCTGCCTGGGGTCCGTCATGGTCTGGTGGCATGGGACAAGGCAGTCAGGGCTCCTAAATGGTCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 72 bp GCTGTCAGGGGCGTGGAGGTGGGCAGACGTATTTCCTaGCATCCGTCTTGTTTCCGCACGTCGAGACCCTTC +
Preference number: 6 (lower is better)
Translates to: AVRGVEVGRRIS*HPSCFRTSRPF
Trigger: GAAGGGTCTCGACGTGCGGAAACAAGACGGATGCCAGGAAATACGTCTGCCCACCTCCACGCCCCTGACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 90 bp AGCCTCTGCGGGACGTGGGTTTCCACACCTGCAAAATGGGATGTTTaGGGGAGTGCTGAGGCACCGTGCAGAACCGAGGAAGTGCCGAGG +
Preference number: 6 (lower is better)
Translates to: SLCGTWVSTPAKWDV*GSAEAPCRTEEVPR
Trigger: CCTCGGCACTTCCTCGGTTCTGCACGGTGCCTCAGCACTCCCCAAAACATCCCATTTTGCAGGTGTGGAAACCCACGTCCCGCAGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 72 bp GTAGAGAACACTCGACACACCTCAGGAGGCACATCCTaGCAGTGCCACCTTCCCACCTGTCCTGCCTTCTGC +
Preference number: 6 (lower is better)
Translates to: VENTRHTSGGTS*QCHLPTCPAFC
Trigger: GCAGAAGGCAGGACAGGTGGGAAGGTGGCACTGGCAGGATGTGCCTCCTGAGGTGTGTCGAGTGTTCTCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 72 bp AAGCGCCGGCCAAATGGGAACTCCTTCCACTTGAGCTaGCGGATGCTGATCTTCAGGGCATCCAGGGAGGTC +
Preference number: 6 (lower is better)
Translates to: KRRPNGNSFHLS*RMLIFRASREV
Trigger: GACCTCCCTGGATGCCCTGAAGATCAGCATCCGCCAGCTCAAGTGGAAGGAGTTCCCATTTGGCCGGCGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000373778.5
ENST00000474723.5
ENST00000487468.5
CDS CCA 72 bp GAAAGGGGAGCAGCATTACAGACCTGCCCTACTACCTaGGGAACTGAGCCGATGACACCTCCACAGTGCCCC +
Preference number: 6 (lower is better)
Translates to: ERGAALQTCPTT*GTEPMTPPQCP
Trigger: GGGGCACTGTGGAGGTGTCATCGGCTCAGTTCCCCAGGTAGTAGGGCAGGTCTGTAATGCTGCTCCCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 72 bp GTCCTGAGGTGCAGGGGTCAGGTGCGGGCCTTAGGATaGAAAGAAGGGAAGGGTGCCGATAAGGGCTGCTTT +
Preference number: 6 (lower is better)
Translates to: VLRCRGQVRALG*KEGKGADKGCF
Trigger: AAAGCAGCCCTTATCGGCACCCTTCCCTTCTTTCCATCCTAAGGCCCGCACCTGACCCCTGCACCTCAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 90 bp GGCTTTGCCAGGTCCTGCCTGCCTGTCTTCAATAGGCCCTGGACCTaGGCATGCCCAAGGCTGTTTCCAAAATGCCACCTTCTGCTGCCT +
Preference number: 6 (lower is better)
Translates to: GFARSCLPVFNRPWT*ACPRLFPKCHLLLP
Trigger: AGGCAGCAGAAGGTGGCATTTTGGAAACAGCCTTGGGCATGCCAAGGTCCAGGGCCTATTGAAGACAGGCAGGCAGGACCTGGCAAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 90 bp TGCTGGGAACTCAACAACCCCACACAAACTCAGGGCAATGCAGAGTaGAAAGGAGGCTGGCTAGCCGGCTGGAGGGGTGTTGGTGAGGAC +
Preference number: 6 (lower is better)
Translates to: CWELNNPTQTQGNAE*KGGWLAGWRGVGED
Trigger: GTCCTCACCAACACCCCTCCAGCCGGCTAGCCAGCCTCCTTTCAACTCTGCATTGCCCTGAGTTTGTGTGGGGTTGTTGAGTTCCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 72 bp AAACGTTCCTATTCACAGCAAGCACCTGCTGGCCCCTaGTCTGTGCCAACGTGGACCCAGCACATGCCTGAC +
Preference number: 6 (lower is better)
Translates to: KRSYSQQAPAGP*SVPTWTQHMPD
Trigger: GTCAGGCATGTGCTGGGTCCACGTTGGCACAGAGCAGGGGCCAGCAGGTGCTTGCTGTGAATAGGAACGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 72 bp GGAGGAGCTATTATCTGTTTACGGACACAGGACAGCTaGCGTGTCCCAGGGAGCCAACAAGGCAGCCGGGAA +
Preference number: 6 (lower is better)
Translates to: GGAIICLRTQDS*RVPGSQQGSRE
Trigger: TTCCCGGCTGCCTTGTTGGCTCCCTGGGACACGGCAGCTGTCCTGTGTCCGTAAACAGATAATAGCTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 72 bp ACCAAAGCTCAACGGTGCTCAGTGTGTGTGTGTGCGTaGGCACGTGTGTGCATGCGTGTGCGTGTGTGCATG +
Preference number: 6 (lower is better)
Translates to: TKAQRCSVCVCA*ARVCMRVRVCM
Trigger: CATGCACACACGCACACGCATGCACACACGTGCGCACGCACACACACACACTGAGCACCGTTGAGCTTTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 72 bp AACAACAGAAATGCTGAGCCCGTCCCCCTAGGAGGTTaGAAGGAAGGGAGCAGGCAGTGTCAGCAAGGCAGG +
Preference number: 6 (lower is better)
Translates to: NNRNAEPVPLGG*KEGSRQCQQGR
Trigger: CCTGCCTTGCTGACACTGCCTGCTCCCTTCCTTCCAACCTCCTAGGGGGACGGGCTCAGCATTTCTGTTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 72 bp ACACAAACTCAGGGCAATGCAGAGTTGAAAGGAGGCTaGCTAGCCGGCTGGAGGGGTGTTGGTGAGGACTGC +
Preference number: 6 (lower is better)
Translates to: TQTQGNAELKGG*LAGWRGVGEDC
Trigger: GCAGTCCTCACCAACACCCCTCCAGCCGGCTAGCCAGCCTCCTTTCAACTCTGCATTGCCCTGAGTTTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS TCA 72 bp TACAGACCTGCCCTACTACCTGGGGAACTGAGCCGATaGCACCTCCACAGTGCCCCATGTAGAGAACACTCG +
Preference number: 6 (lower is better)
Translates to: YRPALLPGELSR*HLHSAPCREHS
Trigger: CGAGTGTTCTCTACATGGGGCACTGTGGAGGTGTCATCGGCTCAGTTCCCCAGGTAGTAGGGCAGGTCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS TCA 72 bp AGCAGCATTACAGACCTGCCCTACTACCTGGGGAACTaGGCCGATGACACCTCCACAGTGCCCCATGTAGAG +
Preference number: 6 (lower is better)
Translates to: SSITDLPYYLGN*ADDTSTVPHVE
Trigger: CTCTACATGGGGCACTGTGGAGGTGTCATCGGCTCAGTTCCCCAGGTAGTAGGGCAGGTCTGTAATGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS TCA 72 bp AACAGATCAGAGAGCCTCAAGCTAAGTCCCCAGAACTaGGTGGAGCAAACACCCAGCCTCTGCGGGACGTGG +
Preference number: 6 (lower is better)
Translates to: NRSESLKLSPQN*VEQTPSLCGTW
Trigger: CCACGTCCCGCAGAGGCTGGGTGTTTGCTCCACTCAGTTCTGGGGACTTAGCTTGAGGCTCTCTGATCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 72 bp CACAGCTGGGTGGGAACCAATGCTGTGGTCCCACAGTaGGCGCGACAAGACAGGAACTTTCCAGTTCTTGGA +
Preference number: 6 (lower is better)
Translates to: HSWVGTNAVVPQ*ARQDRNFPVLG
Trigger: TCCAAGAACTGGAAAGTTCCTGTCTTGTCGCGCGCACTGTGGGACCACAGCATTGGTTCCCACCCAGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 72 bp TTCTACCAAAGCTCAACGGTGCTCAGTGTGTGTGTGTaGGTGCGCACGTGTGTGCATGCGTGTGCGTGTGTG +
Preference number: 6 (lower is better)
Translates to: FYQSSTVLSVCV*VRTCVHACACV
Trigger: CACACACGCACACGCATGCACACACGTGCGCACGCACACACACACACTGAGCACCGTTGAGCTTTGGTAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 72 bp AGCACCCCACCTATGCAGGGGTCCACTCAGACCATCTaGTCAGGGAGGCTAAAGATGGGATTCCTGCTTTGG +
Preference number: 6 (lower is better)
Translates to: STPPMQGSTQTI*SGRLKMGFLLW
Trigger: CCAAAGCAGGAATCCCATCTTTAGCCTCCCTGACCAGATGGTCTGAGTGGACCCCTGCATAGGTGGGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 72 bp GGTCCTGCCTGCCTGTCTTCAATAGGCCCTGGACCTTaGCATGCCCAAGGCTGTTTCCAAAATGCCACCTTC +
Preference number: 6 (lower is better)
Translates to: GPACLSSIGPGP*HAQGCFQNATF
Trigger: GAAGGTGGCATTTTGGAAACAGCCTTGGGCATGCCAAGGTCCAGGGCCTATTGAAGACAGGCAGGCAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 72 bp GACACACCTGGACCAAGTCCTGACTACATGGCCTCCTaGGCCTTCCTTTCCTCATCTGAAAGGGGAGCAGCA +
Preference number: 6 (lower is better)
Translates to: DTPGPSPDYMAS*AFLSSSERGAA
Trigger: TGCTGCTCCCCTTTCAGATGAGGAAAGGAAGGCCCAGGAGGCCATGTAGTCAGGACTTGGTCCAGGTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 72 bp GGACGTGGGTTTCCACACCTGCAAAATGGGATGTTTTaGGGAGTGCTGAGGCACCGTGCAGAACCGAGGAAG +
Preference number: 6 (lower is better)
Translates to: GRGFPHLQNGMF*GVLRHRAEPRK
Trigger: CTTCCTCGGTTCTGCACGGTGCCTCAGCACTCCCCAAAACATCCCATTTTGCAGGTGTGGAAACCCACGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 72 bp GGTGCTTCCAGGCGTTTTTCATCCAGCAGGGACAGGTaGTACTCGCAAAGGTCAATCAGTGAGGCCACCTGC +
Preference number: 6 (lower is better)
Translates to: GASRRFSSSRDR*YSQRSISEATC
Trigger: GCAGGTGGCCTCACTGATTGACCTTTGCGAGTACCACCTGTCCCTGCTGGATGAAAAACGCCTGGAAGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486362.1
CDS CAA 72 bp GGGACGTGGGTTTCCACACCTGCAAAATGGGATGTTTaGGGGAGTGCTGAGGCACCGTGCAGAACCGAGGAA +
Preference number: 6 (lower is better)
Translates to: GTWVSTPAKWDV*GSAEAPCRTEE
Trigger: TTCCTCGGTTCTGCACGGTGCCTCAGCACTCCCCAAAACATCCCATTTTGCAGGTGTGGAAACCCACGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 72 bp CGTGGAGGTGGGCAGACGTATTTCCTGGCATCCGTCTaGTTTCCGCACGTCGAGACCCTTCCTTTTCTCGAC +
Preference number: 6 (lower is better)
Translates to: RGGGQTYFLASV*FPHVETLPFLD
Trigger: GTCGAGAAAAGGAAGGGTCTCGACGTGCGGAAACAAGACGGATGCCAGGAAATACGTCTGCCCACCTCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 90 bp TGTCAGGGGCGTGGAGGTGGGCAGACGTATTTCCTGGCATCCGTCTaGTTTCCGCACGTCGAGACCCTTCCTTTTCTCGACAGACATGTA +
Preference number: 6 (lower is better)
Translates to: CQGRGGGQTYFLASV*FPHVETLPFLDRHV
Trigger: TACATGTCTGTCGAGAAAAGGAAGGGTCTCGACGTGCGGAAACAAGACGGATGCCAGGAAATACGTCTGCCCACCTCCACGCCCCTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS TCA 72 bp TTGGGGGATTGCAGCGGGGACACTGGAACTGAACCTTaGAAGTCTGTTTGCCACTGGGCAGAGGAAGGCCAT +
Preference number: 6 (lower is better)
Translates to: LGDCSGDTGTEP*KSVCHWAEEGH
Trigger: ATGGCCTTCCTCTGCCCAGTGGCAAACAGACTTTCAAGGTTCAGTTCCAGTGTCCCCGCTGCAATCCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 72 bp GTGTGCATCGTGTGTGCGTGCGTGTGTGTGCATGCATaGGCGCGTGTGTGTATAAGCATTATGCTGCGTGGT +
Preference number: 6 (lower is better)
Translates to: VCIVCACVCVHA*ARVCISIMLRG
Trigger: ACCACGCAGCATAATGCTTATACACACACGCGCGCATGCATGCACACACACGCACGCACACACGATGCACAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 72 bp GAGCCTCTTGGTGAGCACAAGACACTACCGCAGGGCTaGAAAGAGCCCTCTCCACTCCGCTCTCTAAATAAC +
Preference number: 6 (lower is better)
Translates to: EPLGEHKTLPQG*KEPSPLRSLNN
Trigger: GTTATTTAGAGAGCGGAGTGGAGAGGGCTCTTTGCAGCCCTGCGGTAGTGTCTTGTGCTCACCAAGAGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 72 bp GAAAGGGCCACATTAACCCCAAATCCAACCACACTCTaGAGAGCTTGGCTTTGCCAGGTCCTGCCTGCCTGT +
Preference number: 6 (lower is better)
Translates to: ERATLTPNPTTL*RAWLCQVLPAC
Trigger: ACAGGCAGGCAGGACCTGGCAAAGCCAAGCTCTCCAGAGTGTGGTTGGATTTGGGGTTAATGTGGCCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 72 bp AGGTCCTGCCTGCCTGTCTTCAATAGGCCCTGGACCTaGGCATGCCCAAGGCTGTTTCCAAAATGCCACCTT +
Preference number: 6 (lower is better)
Translates to: RSCLPVFNRPWT*ACPRLFPKCHL
Trigger: AAGGTGGCATTTTGGAAACAGCCTTGGGCATGCCAAGGTCCAGGGCCTATTGAAGACAGGCAGGCAGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 72 bp CTCTGCCCACTGGGAGGGGTCTGTTGGGACCAGCACTaGCTAACAGCTGCACTGAATCTAGCGGGTCTTTAT +
Preference number: 6 (lower is better)
Translates to: LCPLGGVCWDQH*LTAALNLAGLY
Trigger: ATAAAGACCCGCTAGATTCAGTGCAGCTGTTAGCAAGTGCTGGTCCCAACAGACCCCTCCCAGTGGGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 90 bp AGGCCCTGCCTCTGCCCACTGGGAGGGGTCTGTTGGGACCAGCACTaGCTAACAGCTGCACTGAATCTAGCGGGTCTTTATAAGTATAAG +
Preference number: 6 (lower is better)
Translates to: RPCLCPLGGVCWDQH*LTAALNLAGLYKYK
Trigger: CTTATACTTATAAAGACCCGCTAGATTCAGTGCAGCTGTTAGCAAGTGCTGGTCCCAACAGACCCCTCCCAGTGGGCAGAGGCAGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 90 bp CTGTGGTCCCACAGTGCGCGCGACAAGACAGGAACTTTCCAGTTCTaGGAAGTAGATGGAAGGAACCGCTCACTCTGTTTGGGGGATTGC +
Preference number: 6 (lower is better)
Translates to: LWSHSARDKTGTFQF*EVDGRNRSLCLGDC
Trigger: GCAATCCCCCAAACAGAGTGAGCGGTTCCTTCCATCTACTTCCAAGAACTGGAAAGTTCCTGTCTTGTCGCGCGCACTGTGGGACCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 90 bp AGCCAACAAGGCAGCCGGGAATGTAGAGGTGTTCAGCGGATCGGCTaGGCAAGGTTTAGAAATCTGTGCTTCTTAAAGGCACCCGCAGGC +
Preference number: 6 (lower is better)
Translates to: SQQGSRECRGVQRIG*ARFRNLCFLKAPAG
Trigger: GCCTGCGGGTGCCTTTAAGAAGCACAGATTTCTAAACCTTGCCAAGCCGATCCGCTGAACACCTCTACATTCCCGGCTGCCTTGTTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS TCA 72 bp CAGAACCCTCCCTTGCCACGCACTACGAGCATTTTCTaGGTCCTACAGTGCACCACACCAGGCACAGTACTA +
Preference number: 6 (lower is better)
Translates to: QNPPLPRTTSIF*VLQCTTPGTVL
Trigger: TAGTACTGTGCCTGGTGTGGTGCACTGTAGGACTCAGAAAATGCTCGTAGTGCGTGGCAAGGGAGGGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS TCA 72 bp AAGGGAAGGGTGCCGATAAGGGCTGCTTTCAATAGGTaGCTGGACGTCAGCTCTGTGGCTCTCCAAGTTCCT +
Preference number: 6 (lower is better)
Translates to: KGRVPIRAAFNR*LDVSSVALQVP
Trigger: AGGAACTTGGAGAGCCACAGAGCTGACGTCCAGTCACCTATTGAAAGCAGCCCTTATCGGCACCCTTCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS TCA 72 bp ACTCTGTTTGGGGGATTGCAGCGGGGACACTGGAACTaGACCTTGAAAGTCTGTTTGCCACTGGGCAGAGGA +
Preference number: 6 (lower is better)
Translates to: TLFGGLQRGHWN*TLKVCLPLGRG
Trigger: TCCTCTGCCCAGTGGCAAACAGACTTTCAAGGTTCAGTTCCAGTGTCCCCGCTGCAATCCCCCAAACAGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 72 bp CTTTCCTCATCTGAAAGGGGAGCAGCATTACAGACCTaGCCTACTACCTGGGGAACTGAGCCGATGACACCT +
Preference number: 6 (lower is better)
Translates to: LSSSERGAALQT*PTTWGTEPMTP
Trigger: AGGTGTCATCGGCTCAGTTCCCCAGGTAGTAGGGCAGGTCTGTAATGCTGCTCCCCTTTCAGATGAGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 72 bp ATTGTTTCTCACAATGGACCATTTAGGAGCCCTGACTaGCTTGTCCCATGCCACCAGACCATGACGGACCCC +
Preference number: 6 (lower is better)
Translates to: IVSHNGPFRSPD*LVPCHQTMTDP
Trigger: GGGGTCCGTCATGGTCTGGTGGCATGGGACAAGGCAGTCAGGGCTCCTAAATGGTCCATTGTGAGAAACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 72 bp GGGCTGCTTTCAATAGGTGACTGGACGTCAGCTCTGTaGCTCTCCAAGTTCCTTCCAGACCTATGGAGATGG +
Preference number: 6 (lower is better)
Translates to: GLLSIGDWTSAL*LSKFLPDLWRW
Trigger: CCATCTCCATAGGTCTGGAAGGAACTTGGAGAGCCACAGAGCTGACGTCCAGTCACCTATTGAAAGCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 72 bp GCTTGGGGGAGCAGTCAGTGTTCTGTGGCCCAAGACTaGGTCCTGGTTGGAATCTTAGCAAACACCTTCATG +
Preference number: 6 (lower is better)
Translates to: AWGSSQCSVAQD*VLVGILANTFM
Trigger: CATGAAGGTGTTTGCTAAGATTCCAACCAGGACCCAGTCTTGGGCCACAGAACACTGACTGCTCCCCCAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 72 bp ACCTTCATGTTGGAGGACATGTTTCCCGTGAGCCTCTaGGTGAGCACAAGACACTACCGCAGGGCTGCAAAG +
Preference number: 6 (lower is better)
Translates to: TFMLEDMFPVSL*VSTRHYRRAAK
Trigger: CTTTGCAGCCCTGCGGTAGTGTCTTGTGCTCACCAAGAGGCTCACGGGAAACATGTCCTCCAACATGAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 90 bp GTTCTGCCAAAGGGGACTGGGAGAGCTGCATGGGGGCTTCAAACATaGTTTCTCACAATGGACCATTTAGGAGCCCTGACTGCCTTGTCC +
Preference number: 6 (lower is better)
Translates to: VLPKGTGRAAWGLQT*FLTMDHLGALTALS
Trigger: GGACAAGGCAGTCAGGGCTCCTAAATGGTCCATTGTGAGAAACAATGTTTGAAGCCCCCATGCAGCTCTCCCAGTCCCCTTTGGCAGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 90 bp TTAGCAAACACCTTCATGTTGGAGGACATGTTTCCCGTGAGCCTCTaGGTGAGCACAAGACACTACCGCAGGGCTGCAAAGAGCCCTCTC +
Preference number: 6 (lower is better)
Translates to: LANTFMLEDMFPVSL*VSTRHYRRAAKSPL
Trigger: GAGAGGGCTCTTTGCAGCCCTGCGGTAGTGTCTTGTGCTCACCAAGAGGCTCACGGGAAACATGTCCTCCAACATGAAGGTGTTTGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS TCA 72 bp GAAGCCACTTCCCTGCCTGGGAAAACAGAGTGCCAGTaGTCCTCATCCTTGGTGGGTTGGATGGATCTAGAA +
Preference number: 6 (lower is better)
Translates to: EATSLPGKTECQ*SSSLVGWMDLE
Trigger: TTCTAGATCCATCCAACCCACCAAGGATGAGGATCACTGGCACTCTGTTTTCCCAGGCAGGGAAGTGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 72 bp GTTCAGCGGATCGGCTTGGCAAGGTTTAGAAATCTGTaGTTCTTAAAGGCACCCGCAGGCAAAGTGGAGAGC +
Preference number: 6 (lower is better)
Translates to: VQRIGLARFRNL*FLKAPAGKVES
Trigger: GCTCTCCACTTTGCCTGCGGGTGCCTTTAAGAAGCACAGATTTCTAAACCTTGCCAAGCCGATCCGCTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 72 bp AGTACTAGCGCCTCAAATACTTTCCTGCACCTCGCTTaGAGCACGATGACTGACTCTTCCCAGGTTCCTCAG +
Preference number: 6 (lower is better)
Translates to: STSASNTFLHLA*STMTDSSQVPQ
Trigger: CTGAGGAACCTGGGAAGAGTCAGTCATCGTGCTCCAAGCGAGGTGCAGGAAAGTATTTGAGGCGCTAGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 72 bp TTCTTGGAAGTAGATGGAAGGAACCGCTCACTCTGTTaGGGGGATTGCAGCGGGGACACTGGAACTGAACCT +
Preference number: 6 (lower is better)
Translates to: FLEVDGRNRSLC*GDCSGDTGTEP
Trigger: AGGTTCAGTTCCAGTGTCCCCGCTGCAATCCCCCAAACAGAGTGAGCGGTTCCTTCCATCTACTTCCAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 72 bp TCGTCTTATGCTCCCAAAGATCAAGTGAGACAGGACTaGCCACTCTCACTAAGTGGCTGGGAGACCTGGAGC +
Preference number: 6 (lower is better)
Translates to: SSYAPKDQVRQD*PLSLSGWETWS
Trigger: GCTCCAGGTCTCCCAGCCACTTAGTGAGAGTGGCAAGTCCTGTCTCACTTGATCTTTGGGAGCATAAGACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 90 bp ACAGCTGCACTGAATCTAGCGGGTCTTTATAAGTATAAGCACCTATaGCAGGCTCCATTTTGGCCAGGCCGTGAGGACAAAGCTCCCGCC +
Preference number: 6 (lower is better)
Translates to: TAALNLAGLYKYKHL*QAPFWPGREDKAPA
Trigger: GGCGGGAGCTTTGTCCTCACGGCCTGGCCAAAATGGAGCCTGCAATAGGTGCTTATACTTATAAAGACCCGCTAGATTCAGTGCAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 90 bp GCCCAAGACTGGGTCCTGGTTGGAATCTTAGCAAACACCTTCATGTaGGAGGACATGTTTCCCGTGAGCCTCTTGGTGAGCACAAGACAC +
Preference number: 6 (lower is better)
Translates to: AQDWVLVGILANTFM*EDMFPVSLLVSTRH
Trigger: GTGTCTTGTGCTCACCAAGAGGCTCACGGGAAACATGTCCTCCAACATGAAGGTGTTTGCTAAGATTCCAACCAGGACCCAGTCTTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS TCA 72 bp AAGTCCCGCACCCGGTTCTTTACATACATTACGACGTaGTCCCCACTATCTAGGCAAGGAGCAGGGATCAGA +
Preference number: 6 (lower is better)
Translates to: KSRTRFFTYITT*SPLSRQGAGIR
Trigger: TCTGATCCCTGCTCCTTGCCTAGATAGTGGGGATCACGTCGTAATGTATGTAAAGAACCGGGTGCGGGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 72 bp CTGAGCTTTCAGGGAAGATGCTCGTGTGCTGGCCATTaGAAGCCCAATTCTCAATTACAGGGCCAAGGAGTA +
Preference number: 6 (lower is better)
Translates to: LSFQGRCSCAGH*KPNSQLQGQGV
Trigger: TACTCCTTGGCCCTGTAATTGAGAATTGGGCTTGCAATGGCCAGCACACGAGCATCTTCCCTGAAAGCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 72 bp AATCATGCAGGAAAGGGCCTGGGGTCTAGAAAGGCATaGAACACCATTTCAAGTGTCTGGGCTCCTATCCTC +
Preference number: 6 (lower is better)
Translates to: NHAGKGLGSRKA*NTISSVWAPIL
Trigger: GAGGATAGGAGCCCAGACACTTGAAATGGTGTTCCATGCCTTTCTAGACCCCAGGCCCTTTCCTGCATGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 72 bp AGGAGCAGGGATCAGAGAGGTAAAGTCACTGGCCCGTaGTCATTTAGGCAGAGCGCAACAGATAGAACAAAG +
Preference number: 6 (lower is better)
Translates to: RSRDQRGKVTGP*SFRQSATDRTK
Trigger: CTTTGTTCTATCTGTTGCGCTCTGCCTAAATGACCACGGGCCAGTGACTTTACCTCTCTGATCCCTGCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 72 bp CACAGTGCGCGCGACAAGACAGGAACTTTCCAGTTCTaGGAAGTAGATGGAAGGAACCGCTCACTCTGTTTG +
Preference number: 6 (lower is better)
Translates to: HSARDKTGTFQF*EVDGRNRSLCL
Trigger: CAAACAGAGTGAGCGGTTCCTTCCATCTACTTCCAAGAACTGGAAAGTTCCTGTCTTGTCGCGCGCACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 72 bp GGCAGCCGGGAATGTAGAGGTGTTCAGCGGATCGGCTaGGCAAGGTTTAGAAATCTGTGCTTCTTAAAGGCA +
Preference number: 6 (lower is better)
Translates to: GSRECRGVQRIG*ARFRNLCFLKA
Trigger: TGCCTTTAAGAAGCACAGATTTCTAAACCTTGCCAAGCCGATCCGCTGAACACCTCTACATTCCCGGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 72 bp TCTGAGCTTTCAGGGAAGATGCTCGTGTGCTGGCCATaGCAAGCCCAATTCTCAATTACAGGGCCAAGGAGT +
Preference number: 6 (lower is better)
Translates to: SELSGKMLVCWP*QAQFSITGPRS
Trigger: ACTCCTTGGCCCTGTAATTGAGAATTGGGCTTGCAATGGCCAGCACACGAGCATCTTCCCTGAAAGCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 72 bp TGGGTCCTGGTTGGAATCTTAGCAAACACCTTCATGTaGGAGGACATGTTTCCCGTGAGCCTCTTGGTGAGC +
Preference number: 6 (lower is better)
Translates to: WVLVGILANTFM*EDMFPVSLLVS
Trigger: GCTCACCAAGAGGCTCACGGGAAACATGTCCTCCAACATGAAGGTGTTTGCTAAGATTCCAACCAGGACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 90 bp GCCATCATTTCTGAGCTTTCAGGGAAGATGCTCGTGTGCTGGCCATaGCAAGCCCAATTCTCAATTACAGGGCCAAGGAGTAGAGGACAT +
Preference number: 6 (lower is better)
Translates to: AIISELSGKMLVCWP*QAQFSITGPRSRGH
Trigger: ATGTCCTCTACTCCTTGGCCCTGTAATTGAGAATTGGGCTTGCAATGGCCAGCACACGAGCATCTTCCCTGAAAGCTCAGAAATGATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 72 bp CCTTCTGCTTGGGAAAATAAAGTGATTGCAGAAGTCTaGTGTCACTCACTGAACACCCCAGAGTGGGCTCTG +
Preference number: 6 (lower is better)
Translates to: PSAWENKVIAEV*CHSLNTPEWAL
Trigger: CAGAGCCCACTCTGGGGTGTTCAGTGAGTGACAGCAGACTTCTGCAATCACTTTATTTTCCCAAGCAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 72 bp TGGTGGCTCCCAGCTGATGACAAGTGTGCCCAGACATaGTTACTCTGGTCTTTCTCTGGGAAATCCATTTGT +
Preference number: 6 (lower is better)
Translates to: WWLPADDKCAQT*LLWSFSGKSIC
Trigger: ACAAATGGATTTCCCAGAGAAAGACCAGAGTAAGCATGTCTGGGCACACTTGTCATCAGCTGGGAGCCACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 72 bp GCCATCATTTCTGAGCTTTCAGGGAAGATGCTCGTGTaGTGGCCATTGCAAGCCCAATTCTCAATTACAGGG +
Preference number: 6 (lower is better)
Translates to: AIISELSGKMLV*WPLQAQFSITG
Trigger: CCCTGTAATTGAGAATTGGGCTTGCAATGGCCAGCACACGAGCATCTTCCCTGAAAGCTCAGAAATGATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 72 bp ATCGTAATTTTGCCATTTTCTACCAAAGCTCAACGGTaGTCAGTGTGTGTGTGTGCGTGCGCACGTGTGTGC +
Preference number: 6 (lower is better)
Translates to: IVILPFSTKAQR*SVCVCACARVC
Trigger: GCACACACGTGCGCACGCACACACACACACTGAGCACCGTTGAGCTTTGGTAGAAAATGGCAAAATTACGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 72 bp GATCGATTGTGTCCTGTGCCCCAAATACAACAGATTTaGCCCAGTTGGTGCTTCCAGGCGTTTTTCATCCAG +
Preference number: 6 (lower is better)
Translates to: DRLCPVPQIQQI*PSWCFQAFFIQ
Trigger: CTGGATGAAAAACGCCTGGAAGCACCAACTGGGGCAAATCTGTTGTATTTGGGGCACAGGACACAATCGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486362.1
CDS CCA 72 bp CAGTCAGTGTTCTGTGGCCCAAGACTGGGTCCTGGTTaGAATCTTAGCAAACACCTTCATGTTGGAGGACAT +
Preference number: 6 (lower is better)
Translates to: QSVFCGPRLGPG*NLSKHLHVGGH
Trigger: ATGTCCTCCAACATGAAGGTGTTTGCTAAGATTCCAACCAGGACCCAGTCTTGGGCCACAGAACACTGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 72 bp TTCTCTGGGAAATCCATTTGTTCTGCCAAAGGGGACTaGGAGAGCTGCATGGGGGCTTCAAACATTGTTTCT +
Preference number: 6 (lower is better)
Translates to: FSGKSICSAKGD*ESCMGASNIVS
Trigger: AGAAACAATGTTTGAAGCCCCCATGCAGCTCTCCCAGTCCCCTTTGGCAGAACAAATGGATTTCCCAGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 72 bp ATCATTTCTGAGCTTTCAGGGAAGATGCTCGTGTGCTaGCCATTGCAAGCCCAATTCTCAATTACAGGGCCA +
Preference number: 6 (lower is better)
Translates to: IISELSGKMLVC*PLQAQFSITGP
Trigger: TGGCCCTGTAATTGAGAATTGGGCTTGCAATGGCCAGCACACGAGCATCTTCCCTGAAAGCTCAGAAATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 72 bp CAGAGCAGCCCCTGCTCTGAAATCGCTTGCCAACAATaGGAGACATCTTGGATTAACAATCTTGCCTTTGGG +
Preference number: 6 (lower is better)
Translates to: QSSPCSEIACQQ*ETSWINNLAFG
Trigger: CCCAAAGGCAAGATTGTTAATCCAAGATGTCTCCAATTGTTGGCAAGCGATTTCAGAGCAGGGGCTGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 72 bp AGAGCAGCCCCTGCTCTGAAATCGCTTGCCAACAATTaGAGACATCTTGGATTAACAATCTTGCCTTTGGGT +
Preference number: 6 (lower is better)
Translates to: RAAPALKSLANN*RHLGLTILPLG
Trigger: ACCCAAAGGCAAGATTGTTAATCCAAGATGTCTCCAATTGTTGGCAAGCGATTTCAGAGCAGGGGCTGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CCA 72 bp CCAGCTGATGACAAGTGTGCCCAGACATGCTTACTCTaGTCTTTCTCTGGGAAATCCATTTGTTCTGCCAAA +
Preference number: 6 (lower is better)
Translates to: PADDKCAQTCLL*SFSGKSICSAK
Trigger: TTTGGCAGAACAAATGGATTTCCCAGAGAAAGACCAGAGTAAGCATGTCTGGGCACACTTGTCATCAGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 72 bp CTGAATCTAGCGGGTCTTTATAAGTATAAGCACCTATaGCAGGCTCCATTTTGGCCAGGCCGTGAGGACAAA +
Preference number: 6 (lower is better)
Translates to: LNLAGLYKYKHL*QAPFWPGREDK
Trigger: TTTGTCCTCACGGCCTGGCCAAAATGGAGCCTGCAATAGGTGCTTATACTTATAAAGACCCGCTAGATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 90 bp CCCGGCTCTACTTCCTATCTTCTCGGAGGAAGGAACCATCTGCTTTaGCTATCGTTTCAATTACATCCAATAAAACGAGTGGCCGATTAC +
Preference number: 6 (lower is better)
Translates to: PGSTSYLLGGRNHLL*LSFQLHPIKRVADY
Trigger: GTAATCGGCCACTCGTTTTATTGGATGTAATTGAAACGATAGCAAAAGCAGATGGTTCCTTCCTCCGAGAAGATAGGAAGTAGAGCCGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS TCA 72 bp GTTCACTTGACCGGAGAATATGTCATTGTCGTGAAATaGAACTCCATGCCAGTAGATGTCACAAGGCAAGCG +
Preference number: 6 (lower is better)
Translates to: VHLTGEYVIVVK*NSMPVDVTRQA
Trigger: CGCTTGCCTTGTGACATCTACTGGCATGGAGTTTCATTTCACGACAATGACATATTCTCCGGTCAAGTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321582.11
ENST00000373776.5
ENST00000373778.5
ENST00000474723.5
ENST00000487468.5
CDS TCA 72 bp TTTAGGCAGAGCGCAACAGATAGAACAAAGTGCATATaGAGGTCTGACTGCAAAGCCCTCGCTTTTCCAGAA +
Preference number: 6 (lower is better)
Translates to: FRQSATDRTKCI*RSDCKALAFPE
Trigger: TTCTGGAAAAGCGAGGGCTTTGCAGTCAGACCTTCATATGCACTTTGTTCTATCTGTTGCGCTCTGCCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 72 bp TTTTCTCGACAGACATGTATTAAGACACTTCCCAGGTaGCAAGTCCCGCACCCGGTTCTTTACATACATTAC +
Preference number: 6 (lower is better)
Translates to: FSRQTCIKTLPR*QVPHPVLYIHY
Trigger: GTAATGTATGTAAAGAACCGGGTGCGGGACTTGGCACCTGGGAAGTGTCTTAATACATGTCTGTCGAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 72 bp AGGAAGCCAGTAGCCAGGCTGAAGATAACACTACGTTaGAGCAGCGCCTTCGTTTACAAAACACTTTCACAT +
Preference number: 6 (lower is better)
Translates to: RKPVARLKITLR*SSAFVYKTLSH
Trigger: ATGTGAAAGTGTTTTGTAAACGAAGGCGCTGCTCAAACGTAGTGTTATCTTCAGCCTGGCTACTGGCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 90 bp TATCTGGGGAGGGCGGATTCAAGTAACTTGTTTCCACAGATGCTTTaGAGTACCTGTTATGAACCAGGTCAACTGCTCTTATCAGTTTGG +
Preference number: 6 (lower is better)
Translates to: YLGRADSSNLFPQML*STCYEPGQLLLSVW
Trigger: CCAAACTGATAAGAGCAGTTGACCTGGTTCATAACAGGTACTCAAAAGCATCTGTGGAAACAAGTTACTTGAATCCGCCCTCCCCAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 90 bp AAGGGGTCTAAGGACTTGAGTAAGACATACAGACGAATATCAAACTaGAGCTTGTCGATAAGGAGAGGTTTGCAGATGTACTCTCCTCAG +
Preference number: 6 (lower is better)
Translates to: KGSKDLSKTYRRISN*SLSIRRGLQMYSPQ
Trigger: CTGAGGAGAGTACATCTGCAAACCTCTCCTTATCGACAAGCTCAAGTTTGATATTCGTCTGTATGTCTTACTCAAGTCCTTAGACCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373778.5
CDS GCA 72 bp AGGTTTGCAGATGTACTCTCCTCAGGAAAGAGATTCTaGATGGTTCTCACTGCTCTGCTCAGAGTAATTTTA +
Preference number: 6 (lower is better)
Translates to: RFADVLSSGKRF*MVLTALLRVIL
Trigger: TAAAATTACTCTGAGCAGAGCAGTGAGAACCATGCAGAATCTCTTTCCTGAGGAGAGTACATCTGCAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373778.5
CDS CAA 90 bp AACACTCGGAAGCCAATCACCAGAAATGAGAAAAACATCGTAATTTaGCCATTTTCTACCAAAGCTCAACGGTGCTCAGTGTGTGTGTGT +
Preference number: 6 (lower is better)
Translates to: NTRKPITRNEKNIVI*PFSTKAQRCSVCVC
Trigger: ACACACACACACTGAGCACCGTTGAGCTTTGGTAGAAAATGGCAAAATTACGATGTTTTTCTCATTTCTGGTGATTGGCTTCCGAGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS TCA 72 bp AACCAAATGGGAGATTGGCAAAAATATCCATCAAGGTaGGGTGGATTTCAGGTTAATACACACGGTGGTGAA +
Preference number: 6 (lower is better)
Translates to: NQMGDWQKYPSR*GGFQVNTHGGE
Trigger: TTCACCACCGTGTGTATTAACCTGAAATCCACCTCACCTTGATGGATATTTTTGCCAATCTCCCATTTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS GCA 72 bp TTTCACATTGATGACATTTTCTGTGATCTCGTCTTATaGTCCCAAAGATCAAGTGAGACAGGACTTGCCACT +
Preference number: 6 (lower is better)
Translates to: FHIDDIFCDLVL*SQRSSETGLAT
Trigger: AGTGGCAAGTCCTGTCTCACTTGATCTTTGGGAGCATAAGACGAGATCACAGAAAATGTCATCAATGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 90 bp TCTAAGGACTTGAGTAAGACATACAGACGAATATCAAACTTGAGCTaGTCGATAAGGAGAGGTTTGCAGATGTACTCTCCTCAGGAAAGA +
Preference number: 6 (lower is better)
Translates to: SKDLSKTYRRISNLS*SIRRGLQMYSPQER
Trigger: TCTTTCCTGAGGAGAGTACATCTGCAAACCTCTCCTTATCGACAAGCTCAAGTTTGATATTCGTCTGTATGTCTTACTCAAGTCCTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373778.5
CDS CAA 72 bp AACAATTGGAGACATCTTGGATTAACAATCTTGCCTTaGGGTTTAAAAATATCTGGGGAGGGCGGATTCAAG +
Preference number: 6 (lower is better)
Translates to: NNWRHLGLTILP*GLKISGEGGFK
Trigger: CTTGAATCCGCCCTCCCCAGATATTTTTAAACCCAAAGGCAAGATTGTTAATCCAAGATGTCTCCAATTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 72 bp ACTTCCTATCTTCTCGGAGGAAGGAACCATCTGCTTTaGCTATCGTTTCAATTACATCCAATAAAACGAGTG +
Preference number: 6 (lower is better)
Translates to: TSYLLGGRNHLL*LSFQLHPIKRV
Trigger: CACTCGTTTTATTGGATGTAATTGAAACGATAGCAAAAGCAGATGGTTCCTTCCTCCGAGAAGATAGGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 72 bp ACACTCAGCTTCGTTTTATTATTGCGTTTTATGAAGTaGCCAAGACAACTGAGGCCAAGTAACAGAACCTTG +
Preference number: 6 (lower is better)
Translates to: TLSFVLLLRFMK*PRQLRPSNRTL
Trigger: CAAGGTTCTGTTACTTGGCCTCAGTTGTCTTGGCAACTTCATAAAACGCAATAATAAAACGAAGCTGAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 72 bp TTGAGTAAGACATACAGACGAATATCAAACTTGAGCTaGTCGATAAGGAGAGGTTTGCAGATGTACTCTCCT +
Preference number: 6 (lower is better)
Translates to: LSKTYRRISNLS*SIRRGLQMYSP
Trigger: AGGAGAGTACATCTGCAAACCTCTCCTTATCGACAAGCTCAAGTTTGATATTCGTCTGTATGTCTTACTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373778.5
CDS CAA 90 bp TGTTTAGCAACACTCAGCTTCGTTTTATTATTGCGTTTTATGAAGTaGCCAAGACAACTGAGGCCAAGTAACAGAACCTTGACTTTATGC +
Preference number: 6 (lower is better)
Translates to: CLATLSFVLLLRFMK*PRQLRPSNRTLTLC
Trigger: GCATAAAGTCAAGGTTCTGTTACTTGGCCTCAGTTGTCTTGGCAACTTCATAAAACGCAATAATAAAACGAAGCTGAGTGTTGCTAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11
CDS CAA 90 bp TATACAATGAGCCTGTGTTTAGCAACACTCAGCTTCGTTTTATTATaGCGTTTTATGAAGTTGCCAAGACAACTGAGGCCAAGTAACAGA +
Preference number: 6 (lower is better)
Translates to: YTMSLCLATLSFVLL*RFMKLPRQLRPSNR
Trigger: TCTGTTACTTGGCCTCAGTTGTCTTGGCAACTTCATAAAACGCAATAATAAAACGAAGCTGAGTGTTGCTAAACACAGGCTCATTGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321582.11