RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTL (Homo sapiens)

Ensembl gene IDs: ENSG00000114999

Ensembl transcript IDs: ENST00000233336.7, ENST00000460450.1, ENST00000476615.1, ENST00000485537.1

Found 597 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCGAAGGGATGGGTGGGGAACACACAGGCAACCTCCAATATGCTCTaGCGTCCAATCCATAGTCCAGAGCAGTGGGGCTGCAGCCGGGCA +
Preference number: 1 (lower is better)
Translates to: PKGWVGNTQATSNML*RPIHSPEQWGCSRA
Trigger: TGCCCGGCTGCAGCCCCACTGCTCTGGACTATGGATTGGACGTCAGAGCATATTGGAGGTTGCCTGTGTGTTCCCCACCCATCCCTTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR GCA 90 bp CTTCCAAAGGCTTTGGGCCTGTCCACTCTCAGGGTCCTAAGTAGGTaGCTGCCTGGATCCATGTCTGCTTGCACCCTGCACCCTGCACCC +
Preference number: 1 (lower is better)
Translates to: LPKALGLSTLRVLSR*LPGSMSACTLHPAP
Trigger: GGGTGCAGGGTGCAGGGTGCAAGCAGACATGGATCCAGGCAGGCACCTACTTAGGACCCTGAGAGTGGACAGGCCCAAAGCCTTTGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR TCA 90 bp AAAAGTCTCAACAGCACTGCTGAGAGCTACATCTGGGAAGCCCCCTaGGCAGCCCTCTCTTTGGGAGCTGCCTCCTCTGCTCACGTGCCT +
Preference number: 1 (lower is better)
Translates to: KSLNSTAESYIWEAP*AALSLGAASSAHVP
Trigger: AGGCACGTGAGCAGAGGAGGCAGCTCCCAAAGAGAGGGCTGCTCAGGGGGCTTCCCAGATGTAGCTCTCAGCAGTGCTGTTGAGACTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR GCA 90 bp GAGCTACATCTGGGAAGCCCCCTGAGCAGCCCTCTCTTTGGGAGCTaGCTCCTCTGCTCACGTGCCTTCTTCCATCTCATCTTTGCGAGT +
Preference number: 1 (lower is better)
Translates to: ELHLGSPLSSPLFGS*LLCSRAFFHLIFAS
Trigger: ACTCGCAAAGATGAGATGGAAGAAGGCACGTGAGCAGAGGAGGCAGCTCCCAAAGAGAGGGCTGCTCAGGGGGCTTCCCAGATGTAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 90 bp CTGCTGAGAGCTACATCTGGGAAGCCCCCTGAGCAGCCCTCTCTTTaGGAGCTGCCTCCTCTGCTCACGTGCCTTCTTCCATCTCATCTT +
Preference number: 1 (lower is better)
Translates to: LLRATSGKPPEQPSL*ELPPLLTCLLPSHL
Trigger: AAGATGAGATGGAAGAAGGCACGTGAGCAGAGGAGGCAGCTCCCAAAGAGAGGGCTGCTCAGGGGGCTTCCCAGATGTAGCTCTCAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR GCA 90 bp TGTTACCGAAGGGATGGGTGGGGAACACACAGGCAACCTCCAATATaGTCTGACGTCCAATCCATAGTCCAGAGCAGTGGGGCTGCAGCC +
Preference number: 1 (lower is better)
Translates to: CYRRDGWGTHRQPPI*SDVQSIVQSSGAAA
Trigger: GGCTGCAGCCCCACTGCTCTGGACTATGGATTGGACGTCAGAGCATATTGGAGGTTGCCTGTGTGTTCCCCACCCATCCCTTCGGTAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR GCA 90 bp GAAGCTTTGGAGGAGTTCCAATCCCCTTCTGAGCCCTACGGTGGCTaGTCTGCTGCTGGATGTCAGCATGATTGTGTGGCCGAGGCTGTT +
Preference number: 1 (lower is better)
Translates to: EALEEFQSPSEPYGG*SAAGCQHDCVAEAV
Trigger: AACAGCCTCGGCCACACAATCATGCTGACATCCAGCAGCAGAGCAGCCACCGTAGGGCTCAGAAGGGGATTGGAACTCCTCCAAAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 90 bp TGCTGTGGGCTGGATAAAGAGCAATCCAGTCATTTCACCATTCCCTaGAGCAGGACCCCGTGCTTTTTCCAAGGCAGCAGGGAGTGCCCT +
Preference number: 1 (lower is better)
Translates to: CCGLDKEQSSHFTIP*SRTPCFFQGSRECP
Trigger: AGGGCACTCCCTGCTGCCTTGGAAAAAGCACGGGGTCCTGCTCCAGGGAATGGTGAAATGACTGGATTGCTCTTTATCCAGCCCACAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR TCA 90 bp ATATGCTGTTTTGGGGCCCAACCCGCACAAACCCTGACAGGTGACTaGCCAAACACCATCAGGAAGGTGATGAGGGAAACCACCTTTGCC +
Preference number: 1 (lower is better)
Translates to: ICCFGAQPAQTLTGD*PNTIRKVMRETTFA
Trigger: GGCAAAGGTGGTTTCCCTCATCACCTTCCTGATGGTGTTTGGTCAGTCACCTGTCAGGGTTTGTGCGGGTTGGGCCCCAAAACAGCATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR TCA 90 bp CAGCATATGCTGTTTTGGGGCCCAACCCGCACAAACCCTGACAGGTaGCTGACCAAACACCATCAGGAAGGTGATGAGGGAAACCACCTT +
Preference number: 1 (lower is better)
Translates to: QHMLFWGPTRTNPDR*LTKHHQEGDEGNHL
Trigger: AAGGTGGTTTCCCTCATCACCTTCCTGATGGTGTTTGGTCAGTCACCTGTCAGGGTTTGTGCGGGTTGGGCCCCAAAACAGCATATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 90 bp GCTTGTACAGAGCTTAGTGTGGCAGAGTGTTACCGAAGGGATGGGTaGGGAACACACAGGCAACCTCCAATATGCTCTGACGTCCAATCC +
Preference number: 1 (lower is better)
Translates to: ACTELSVAECYRRDG*GTHRQPPICSDVQS
Trigger: GGATTGGACGTCAGAGCATATTGGAGGTTGCCTGTGTGTTCCCCACCCATCCCTTCGGTAACACTCTGCCACACTAAGCTCTGTACAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 90 bp GCCCACCTAGACTTGCCAGGGACCCAGAACCCTACACGTTCTAACTaGGTATACATCTTCCCAGGATCCGATCAGATCTCACTCCCATCT +
Preference number: 1 (lower is better)
Translates to: AHLDLPGTQNPTRSN*VYIFPGSDQISLPS
Trigger: AGATGGGAGTGAGATCTGATCGGATCCTGGGAAGATGTATACCCAGTTAGAACGTGTAGGGTTCTGGGTCCCTGGCAAGTCTAGGTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR TCA 90 bp CCCCCAGCAACGGGTAGCACTTACATGGACCAAAAGTATGAAGCCTaGCTGGGAGCCAGGCATAACCTTCTGTGTCAAGGACATCATGGA +
Preference number: 1 (lower is better)
Translates to: PPATGSTYMDQKYEA*LGARHNLLCQGHHG
Trigger: TCCATGATGTCCTTGACACAGAAGGTTATGCCTGGCTCCCAGTCAGGCTTCATACTTTTGGTCCATGTAAGTGCTACCCGTTGCTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR GCA 90 bp CTTTGCCGAGAGGCCAGTGCACAGCACAAAACTAAGGACTGTTGGTaGATGCTTGTACAGAGCTTAGTGTGGCAGAGTGTTACCGAAGGG +
Preference number: 1 (lower is better)
Translates to: LCREASAQHKTKDCW*MLVQSLVWQSVTEG
Trigger: CCCTTCGGTAACACTCTGCCACACTAAGCTCTGTACAAGCATGCACCAACAGTCCTTAGTTTTGTGCTGTGCACTGGCCTCTCGGCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR TCA 90 bp AGGGCTTCTGGCATGGAAACCTCCTCTGTGCCAGAGGTATATTTATaGAGTGGAAGCAGCCACAGAAGGCAGGCCAGCCATACAAAGGAA +
Preference number: 1 (lower is better)
Translates to: RASGMETSSVPEVYL*SGSSHRRQASHTKE
Trigger: TTCCTTTGTATGGCTGGCCTGCCTTCTGTGGCTGCTTCCACTTCATAAATATACCTCTGGCACAGAGGAGGTTTCCATGCCAGAAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 90 bp CACAAAACTAAGGACTGTTGGTGCATGCTTGTACAGAGCTTAGTGTaGCAGAGTGTTACCGAAGGGATGGGTGGGGAACACACAGGCAAC +
Preference number: 1 (lower is better)
Translates to: HKTKDCWCMLVQSLV*QSVTEGMGGEHTGN
Trigger: GTTGCCTGTGTGTTCCCCACCCATCCCTTCGGTAACACTCTGCCACACTAAGCTCTGTACAAGCATGCACCAACAGTCCTTAGTTTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 90 bp CACCTTTGCCGAGAGGCCAGTGCACAGCACAAAACTAAGGACTGTTaGTGCATGCTTGTACAGAGCTTAGTGTGGCAGAGTGTTACCGAA +
Preference number: 1 (lower is better)
Translates to: HLCREASAQHKTKDC*CMLVQSLVWQSVTE
Trigger: TTCGGTAACACTCTGCCACACTAAGCTCTGTACAAGCATGCACCAACAGTCCTTAGTTTTGTGCTGTGCACTGGCCTCTCGGCAAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 90 bp CAGCAACGGGTAGCACTTACATGGACCAAAAGTATGAAGCCTGACTaGGAGCCAGGCATAACCTTCTGTGTCAAGGACATCATGGAAGGG +
Preference number: 1 (lower is better)
Translates to: QQRVALTWTKSMKPD*EPGITFCVKDIMEG
Trigger: CCCTTCCATGATGTCCTTGACACAGAAGGTTATGCCTGGCTCCCAGTCAGGCTTCATACTTTTGGTCCATGTAAGTGCTACCCGTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 90 bp CTGTCCTCTCTGTTTGTGCAGACACTTAAGGTCAGACGAAAGAGCTaGGGAATTCTCAGGTCTCTTCTGGGCATGTGCACAGTCCTACAC +
Preference number: 1 (lower is better)
Translates to: LSSLFVQTLKVRRKS*GILRSLLGMCTVLH
Trigger: GTGTAGGACTGTGCACATGCCCAGAAGAGACCTGAGAATTCCCCAGCTCTTTCGTCTGACCTTAAGTGTCTGCACAAACAGAGAGGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR GCA 90 bp CGTGCCTTCTTCCATCTCATCTTTGCGAGTTGCCTTTCTTTCCCCTaGTGTGGGCTGGATAAAGAGCAATCCAGTCATTTCACCATTCCC +
Preference number: 1 (lower is better)
Translates to: RAFFHLIFASCLSFP*CGLDKEQSSHFTIP
Trigger: GGGAATGGTGAAATGACTGGATTGCTCTTTATCCAGCCCACAGCAGGGGAAAGAAAGGCAACTCGCAAAGATGAGATGGAAGAAGGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR GCA 90 bp GTCAGACGAAAGAGCTGGGGAATTCTCAGGTCTCTTCTGGGCATGTaGACAGTCCTACACATGTGTGTGGCCTTCTGCATTCTTAGGAAT +
Preference number: 1 (lower is better)
Translates to: VRRKSWGILRSLLGM*TVLHMCVAFCILRN
Trigger: ATTCCTAAGAATGCAGAAGGCCACACACATGTGTAGGACTGTGCACATGCCCAGAAGAGACCTGAGAATTCCCCAGCTCTTTCGTCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 90 bp AGGAATGGAGCACACATAGGCATGAAGAAAGAACGTAGCACGTTCTaGTGGGGAGGGCAGTTTTCAATGGGTTGCTGTGATTTCCAGGAC +
Preference number: 1 (lower is better)
Translates to: RNGAHIGMKKERSTF*WGGQFSMGCCDFQD
Trigger: GTCCTGGAAATCACAGCAACCCATTGAAAACTGCCCTCCCCACCAGAACGTGCTACGTTCTTTCTTCATGCCTATGTGTGCTCCATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 90 bp AATGGAGCACACATAGGCATGAAGAAAGAACGTAGCACGTTCTGGTaGGGAGGGCAGTTTTCAATGGGTTGCTGTGATTTCCAGGACACT +
Preference number: 1 (lower is better)
Translates to: NGAHIGMKKERSTFW*GGQFSMGCCDFQDT
Trigger: AGTGTCCTGGAAATCACAGCAACCCATTGAAAACTGCCCTCCCCACCAGAACGTGCTACGTTCTTTCTTCATGCCTATGTGTGCTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 90 bp TGTGAAACCTGTTTGGAGTGGAGTGCCTACACAGGGCTTCTGGCATaGAAACCTCCTCTGTGCCAGAGGTATATTTATGAAGTGGAAGCA +
Preference number: 1 (lower is better)
Translates to: CETCLEWSAYTGLLA*KPPLCQRYIYEVEA
Trigger: TGCTTCCACTTCATAAATATACCTCTGGCACAGAGGAGGTTTCCATGCCAGAAGCCCTGTGTAGGCACTCCACTCCAAACAGGTTTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 90 bp GTGTATGTGAAACCTGTTTGGAGTGGAGTGCCTACACAGGGCTTCTaGCATGGAAACCTCCTCTGTGCCAGAGGTATATTTATGAAGTGG +
Preference number: 1 (lower is better)
Translates to: VYVKPVWSGVPTQGF*HGNLLCARGIFMKW
Trigger: CCACTTCATAAATATACCTCTGGCACAGAGGAGGTTTCCATGCCAGAAGCCCTGTGTAGGCACTCCACTCCAAACAGGTTTCACATACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR GCA 90 bp GATCTCACTCCCATCTCAGAATTTCCCAAACACCAACCCATCGGCTaGGTTGGGCCTCAAGGATTAATGACTACAACTGACTGTTTTATT +
Preference number: 1 (lower is better)
Translates to: DLTPISEFPKHQPIG*VGPQGLMTTTDCFI
Trigger: AATAAAACAGTCAGTTGTAGTCATTAATCCTTGAGGCCCAACGCAGCCGATGGGTTGGTGTTTGGGAAATTCTGAGATGGGAGTGAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR GCA 90 bp TCTCTTCTGGGCATGTGCACAGTCCTACACATGTGTGTGGCCTTCTaGATTCTTAGGAATAGGTTGAAGCTTTTCAAAACGTCCTATAGA +
Preference number: 1 (lower is better)
Translates to: SLLGMCTVLHMCVAF*ILRNRLKLFKTSYR
Trigger: TCTATAGGACGTTTTGAAAAGCTTCAACCTATTCCTAAGAATGCAGAAGGCCACACACATGTGTAGGACTGTGCACATGCCCAGAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 90 bp TGCTGGCAGGAATGTAAATTGGTTGAACCACTGTGGAAAGAAGTTTaGAGATTTCTCAAAGAATTTAAAACAGAGCAGCTGGGCATGGTG +
Preference number: 1 (lower is better)
Translates to: CWQECKLVEPLWKEV*RFLKEFKTEQLGMV
Trigger: CACCATGCCCAGCTGCTCTGTTTTAAATTCTTTGAGAAATCTCCAAACTTCTTTCCACAGTGGTTCAACCAATTTACATTCCTGCCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR TCA 90 bp ATCCTGTCACTTCCAACAACATGGATGGAACTGAAGATCGTTATGTaGAGTGAAATTAGCCAGGTAAGTTTTGAAGTAAGCCAGGTCCTA +
Preference number: 1 (lower is better)
Translates to: ILSLPTTWMELKIVM*SEISQVSFEVSQVL
Trigger: TAGGACCTGGCTTACTTCAAAACTTACCTGGCTAATTTCACTTCACATAACGATCTTCAGTTCCATCCATGTTGTTGGAAGTGACAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR TCA 90 bp TTGGGAAGAAAGCTCCCAACTGGAGCTTTCACATCACCATTAATATaGTGTAGGCTGTGGGTTTTTCCAAAGATGCTCTTTATCATGTTG +
Preference number: 1 (lower is better)
Translates to: LGRKLPTGAFTSPLI*CRLWVFPKMLFIML
Trigger: CAACATGATAAAGAGCATCTTTGGAAAAACCCACAGCCTACATCATATTAATGGTGATGTGAAAGCTCCAGTTGGGAGCTTTCTTCCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 90 bp ATTATGCTTGCAACAATCTTCAAGTTCTGCTACTATGTATTGCATTaGAGAGGGGTTCATTTTCCTTTGCCTTCAGGGACTGCTATGGTT +
Preference number: 1 (lower is better)
Translates to: IMLATIFKFCYYVLH*RGVHFPLPSGTAMV
Trigger: AACCATAGCAGTCCCTGAAGGCAAAGGAAAATGAACCCCTCTCCAATGCAATACATAGTAGCAGAACTTGAAGATTGTTGCAAGCATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR TCA 90 bp AGGTTTCTCAGAAAATCCATCAAGATTCACAGACTTCCTGACATCTaGATTCTTAGCTCTGTTACTGTGAGGGCTAGAAAACTCGTGAAT +
Preference number: 1 (lower is better)
Translates to: RFLRKSIKIHRLPDI*ILSSVTVRARKLVN
Trigger: ATTCACGAGTTTTCTAGCCCTCACAGTAACAGAGCTAAGAATTCAGATGTCAGGAAGTCTGTGAATCTTGATGGATTTTCTGAGAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 90 bp AATATTGCACAGTCTCATAAGTGGGAGCCAAACATTAGATACACATaGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGG +
Preference number: 1 (lower is better)
Translates to: NIAQSHKWEPNIRYT*TQKWQQETLKMTRG
Trigger: CCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTATCTAATGTTTGGCTCCCACTTATGAGACTGTGCAATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 90 bp TATTGGTCTGCTATTTGCTTTTCTTGTGACATCTTTGTCTGGTTTTaGTATCAGGGTATTAAGAGTGACCTCATAAAGTTGAGGACACTC +
Preference number: 1 (lower is better)
Translates to: YWSAICFSCDIFVWF*YQGIKSDLIKLRTL
Trigger: GAGTGTCCTCAACTTTATGAGGTCACTCTTAATACCCTGATACCAAAACCAGACAAAGATGTCACAAGAAAAGCAAATAGCAGACCAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 90 bp ATGCTTATACACTGCTGGCAGGAATGTAAATTGGTTGAACCACTGTaGAAAGAAGTTTGGAGATTTCTCAAAGAATTTAAAACAGAGCAG +
Preference number: 1 (lower is better)
Translates to: MLIHCWQECKLVEPL*KEVWRFLKEFKTEQ
Trigger: CTGCTCTGTTTTAAATTCTTTGAGAAATCTCCAAACTTCTTTCCACAGTGGTTCAACCAATTTACATTCCTGCCAGCAGTGTATAAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR GCA 90 bp ATCAAATTGTCTTGGCCTCCTTGTCGAAAATCAGTTCACTATAGATaGAAGGGTTTATTTTTGACTCTCAGTTCTATTCTCTTGATCTGT +
Preference number: 1 (lower is better)
Translates to: IKLSWPPCRKSVHYR*KGLFLTLSSILLIC
Trigger: ACAGATCAAGAGAATAGAACTGAGAGTCAAAAATAAACCCTTGCATCTATAGTGAACTGATTTTCGACAAGGAGGCCAAGACAATTTGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 90 bp ATTAGTTCTAACAGCGTAAGTGGATTTCTTAGGACTTTTTCTATATaGTATCTTGTCGTCTGCAAAGAGAGATCATCATACTTCTCCCTT +
Preference number: 1 (lower is better)
Translates to: ISSNSVSGFLRTFSI*YLVVCKERSSYFSL
Trigger: AAGGGAGAAGTATGATGATCTCTCTTTGCAGACGACAAGATACCATATAGAAAAAGTCCTAAGAAATCCACTTACGCTGTTAGAACTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp GTGGAAGCAGCCACAGAAGGCAGGCCAGCCATACAAAGGAAAGATGTCCAAAGCGACCAGAGGTCCCAGTaGCCTGCCGTTCCCGGGGAG +
Preference number: 2 (lower is better)
Translates to: VEAATEGRPAIQRKDVQSDQRSQ*PAVPGE
Trigger: CTCCCCGGGAACGGCAGGGCACTGGGACCTCTGGTC...GCTTTGGACATCTTTCCTTTGTATGGCTGGCCTGCCTTCTGTGGCTGCTTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp ATCTCACTCCCATCTCAGAATTTCCCAAACACCAACCCATCGGCTGCGTTGGGCATCTGGGAAGCCCCCTaGGCAGCCCTCTCTTTGGGA +
Preference number: 2 (lower is better)
Translates to: ISLPSQNFPNTNPSAALGIWEAP*AALSLG
Trigger: TCCCAAAGAGAGGGCTGCTCAGGGGGCTTCCCAGAT...GCCCAACGCAGCCGATGGGTTGGTGTTTGGGAAATTCTGAGATGGGAGTGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp ATCTCACTCCCATCTCAGAATTTCCCAAACACCAACCCATCGGCTGCGTTGGGCCCTCTCTTTGGGAGCTaGCTCCTCTGCTCACGTGCC +
Preference number: 2 (lower is better)
Translates to: ISLPSQNFPNTNPSAALGPLFGS*LLCSRA
Trigger: GGCACGTGAGCAGAGGAGGCAGCTCCCAAAGAGAGG...GCCCAACGCAGCCGATGGGTTGGTGTTTGGGAAATTCTGAGATGGGAGTGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCTGGCCGAGGCTGTTGTaGAGCTGGGGAAAGGGGGAG +
Preference number: 2 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSWPRLL*SWGKGE
Trigger: CTCCCCCTTTCCCCAGCTCCACAACAGCCTCGGCCA...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp GTGGAAGCAGCCACAGAAGGCAGGCCAGCCATACAAAGGAAAGATGTCCAAAGCAGCTACTCAGGAGGCTaGGACGGGAGGACTGCTCAA +
Preference number: 2 (lower is better)
Translates to: VEAATEGRPAIQRKDVQSSYSGG*DGRTAQ
Trigger: TTGAGCAGTCCTCCCGTCTCAGCCTCCTGAGTAGCT...GCTTTGGACATCTTTCCTTTGTATGGCTGGCCTGCCTTCTGTGGCTGCTTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAAGAGCAGCCCTCTCTTTaGGAGCTGCCTCCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQEQPSL*ELPPLL
Trigger: GAGCAGAGGAGGCAGCTCCCAAAGAGAGGGCTGCTC...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp ATCTCACTCCCATCTCAGAATTTCCCAAACACCAACCCATCGGCTGCGTTGGGCAACCCGCACAAACCCTaGCAGGTGACTGACCAAACA +
Preference number: 2 (lower is better)
Translates to: ISLPSQNFPNTNPSAALGNPHKP*QVTDQT
Trigger: TGTTTGGTCAGTCACCTGTCAGGGTTTGTGCGGGTT...GCCCAACGCAGCCGATGGGTTGGTGTTTGGGAAATTCTGAGATGGGAGTGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAAAGGAGGTGTAGCTACTaGCAGGAAGTGGGACCAGTC +
Preference number: 2 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQRRCSY*QEVGPV
Trigger: GACTGGTCCCACTTCCTGTCAGTAGCTACACCTCCT...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp ATCTCACTCCCATCTCAGAATTTCCCAAACACCAACCCATCGGCTGCGTTGGGCTGTCCCTCTAGCTACTaGAGAAAGTGCTTGGGGGCA +
Preference number: 2 (lower is better)
Translates to: ISLPSQNFPNTNPSAALGCPSSY*RKCLGA
Trigger: TGCCCCCAAGCACTTTCTGCAGTAGCTAGAGGGACA...GCCCAACGCAGCCGATGGGTTGGTGTTTGGGAAATTCTGAGATGGGAGTGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp GTGGAAGCAGCCACAGAAGGCAGGCCAGCCATACAAAGGAAAGATGTCCAAAGCTTTCCAAATAAACCATaGCTCCTCCCCCAGCAACGG +
Preference number: 2 (lower is better)
Translates to: VEAATEGRPAIQRKDVQSFPNKP*LLPQQR
Trigger: CCGTTGCTGGGGGAGGAGTCATGGTTTATTTGGAAA...GCTTTGGACATCTTTCCTTTGTATGGCTGGCCTGCCTTCTGTGGCTGCTTCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp TTTGCCGAGAGGCCAGTGCACAGCACAAAACTAAGGACTGTTGGTGCATGCTTGGAGGGGAAGGAGCTCTaGTCACAAAGCTGCCTTTGT +
Preference number: 2 (lower is better)
Translates to: FAERPVHSTKLRTVGACLEGKEL*SQSCLC
Trigger: ACAAAGGCAGCTTTGTGAGCAGAGCTCCTTCCCCTC...CAAGCATGCACCAACAGTCCTTAGTTTTGTGCTGTGCACTGGCCTCTCGGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp ATCTCACTCCCATCTCAGAATTTCCCAAACACCAACCCATCGGCTGCGTTGGGCGTACAGAGCTTAGTGTaGCAGAGTGTTACCGAAGGG +
Preference number: 2 (lower is better)
Translates to: ISLPSQNFPNTNPSAALGVQSLV*QSVTEG
Trigger: CCCTTCGGTAACACTCTGCCACACTAAGCTCTGTAC...GCCCAACGCAGCCGATGGGTTGGTGTTTGGGAAATTCTGAGATGGGAGTGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAACAGCATATGCTGTTTTaGGGCCCAACCCGCACAAAC +
Preference number: 2 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQQHMLF*GPTRTN
Trigger: GTTTGTGCGGGTTGGGCCCCAAAACAGCATATGCTG...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAAACCCATCGGCTGCGTTaGGCCTCAAGGATTAATGAC +
Preference number: 2 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQTHRLR*ASRIND
Trigger: GTCATTAATCCTTGAGGCCCAACGCAGCCGATGGGT...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CAA 90 bp AATACAAAAATGCCCATGCTTTCCCTGTCACCCGCCCACCTAGACTaGCCAGGGACCCAGAACCCTACACGTTCTAACTGGGTATACATC +
Preference number: 2 (lower is better)
Translates to: NTKMPMLSLSPAHLD*PGTQNPTRSNWVYI
Trigger: GATGTATACCCAGTTAGAACGTGTAGGGTTCTGGGTCCCTGGCAAGTCTAGGTGGGCGGGTGACAGGGAAAGCATGGGCATTTTTGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CAA 90 bp CTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAAACCTGTTaGGAGTGGAGTGCCTACACAGGGCTTCTGGCATGGAAACCTCCT +
Preference number: 2 (lower is better)
Translates to: LLSPLGMCHSVCETC*EWSAYTGLLAWKPP
Trigger: AGGAGGTTTCCATGCCAGAAGCCCTGTGTAGGCACTCCACTCCAAACAGGTTTCACATACACTATGACACATTCCCAGTGGACTCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCATGGTCTCCATCTCCTaGCCTCGTGATCGCCCGCCT +
Preference number: 2 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFMVSIS*PRDRPP
Trigger: AGGCGGGCGATCACGAGGTCAGGAGATGGAGACCAT...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAAGAGGTCCCAGTGCCCTaGCGTTCCCGGGGAGAGGGG +
Preference number: 2 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKEVPVP*RSRGEG
Trigger: CCCCTCTCCCCGGGAACGGCAGGGCACTGGGACCTC...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAATTGCTGAGGATGGAGTaGAGTGGCATGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQLLRME*SGMILA
Trigger: AGCCAAGATCATGCCACTGCACTCCATCCTCAGCAA...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp GTGGAAGCAGCCACAGAAGGCAGGCCAGCCATACAAAGGAAAGATGTCCAAAGCAACTCGAATCCTTCCTaGAAGGAAACCTGTCCCTCT +
Preference number: 2 (lower is better)
Translates to: VEAATEGRPAIQRKDVQSNSNPS*KETCPS
Trigger: AGAGGGACAGGTTTCCTTCCAGGAAGGATTCGAGTT...GCTTTGGACATCTTTCCTTTGTATGGCTGGCCTGCCTTCTGTGGCTGCTTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCAGTATGAAGCCTGACTaGGAGCCAGGCATAACCTTC +
Preference number: 2 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSSMKPD*EPGITF
Trigger: GAAGGTTATGCCTGGCTCCCAGTCAGGCTTCATACT...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAATTCAATGGGTTGCTGTaGTTTCCAGGACACTCTAGG +
Preference number: 2 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQFNGLL*FPGHSR
Trigger: CCTAGAGTGTCCTGGAAATCACAGCAACCCATTGAA...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGCATAGTCCAGAGCAGTaGGGCTGCAGCCGGGCATGG +
Preference number: 2 (lower is better)
Translates to: IHMDTKMATRDTKDDKREHSPEQ*GCSRAW
Trigger: CCATGCCCGGCTGCAGCCCCACTGCTCTGGACTATG...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCGAGGGCAGTTTTCAATaGGTTGCTGTGATTTCCAGG +
Preference number: 2 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSEGSFQ*VAVISR
Trigger: CCTGGAAATCACAGCAACCCATTGAAAACTGCCCTC...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCACACATCATGTCAGCTaGTACCTATGTCAGCACCTG +
Preference number: 2 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSTHHVS*YLCQHL
Trigger: CAGGTGCTGACATAGGTACCAGCTGACATGATGTGT...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAAACAAACCCTGACAGGTaGCTGACCAAACACCATCAG +
Preference number: 2 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCETNPDR*LTKHHQ
Trigger: CTGATGGTGTTTGGTCAGTCACCTGTCAGGGTTTGT...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCCCAGATATAGCCCCTTaGTATTGGACTTCTCATCCT +
Preference number: 2 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSPDIAP*YWTSHP
Trigger: AGGATGAGAAGTCCAATATCAAGGGGCTATATCTGG...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCTGTCTGACGGGTGTCTaGAGCACTGATCATTTTTCT +
Preference number: 2 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSCLTGV*STDHFS
Trigger: AGAAAAATGATCAGTGCTTCAGACACCCGTCAGACA...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCTGGAGCAGGACCCCGTaGTTTTTCCAAGGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: KAEILDQDCVQLVDQFGAWSRTP*FFQGSR
Trigger: CCTGCTGCCTTGGAAAAAGCACGGGGTCCTGCTCCA...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAACTTCCATCTCATCTTTaGGAGTTGCCTTTCTTTCCC +
Preference number: 2 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQLPSHL*ELPFFP
Trigger: GGGAAAGAAAGGCAACTCGCAAAGATGAGATGGAAG...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCAGGCAACCTCCAATATaGTCTGACGTCCAATCCATA +
Preference number: 2 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSRQPPI*SDVQSI
Trigger: TATGGATTGGACGTCAGAGCATATTGGAGGTTGCCT...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp ATCTCACTCCCATCTCAGAATTTCCCAAACACCAACCCATCGGCTGCGTTGGGCACTAAGGACTGTTGGTaGATGCTTGTACAGAGCTTA +
Preference number: 2 (lower is better)
Translates to: ISLPSQNFPNTNPSAALGTKDCW*MLVQSL
Trigger: TAAGCTCTGTACAAGCATGCACCAACAGTCCTTAGT...GCCCAACGCAGCCGATGGGTTGGTGTTTGGGAAATTCTGAGATGGGAGTGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAAGTAGTTTTCAATCTTTaGTCCCCTCCTTCTCTCCTG +
Preference number: 2 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQVVFNL*SPPSLL
Trigger: CAGGAGAGAAGGAGGGGAGCAAAGATTGAAAACTAC...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCCTACTGCTAGTGATGTaGCCTCCTGAAAAGCCTATA +
Preference number: 2 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSLLLVM*PPEKPI
Trigger: TATAGGCTTTTCAGGAGGCCACATCACTAGCAGTAG...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CAA 90 bp TATGGCCTAGCATGTGATCTACCCCAGAGAATGTTCCATGTGCACTaGAGAAGGATGTGTATTTTGCTGCTGTTGGGTGGAGTGCCTTGT +
Preference number: 2 (lower is better)
Translates to: YGLACDLPQRMFHVH*RRMCILLLLGGVPC
Trigger: ACAAGGCACTCCACCCAACAGCAGCAAAATACACATCCTTCTCAAGTGCACATGGAACATTCTCTGGGGTAGATCACATGCTAGGCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCACCCTGACAGGTGACTaGCCAAACACCATCAGGAAG +
Preference number: 2 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFTLTGD*PNTIRK
Trigger: CTTCCTGATGGTGTTTGGTCAGTCACCTGTCAGGGT...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCCCCTGGGTCAGGCAATaGTCTCTTTCATGGGCTAAG +
Preference number: 2 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFPWVRQ*SLSWAK
Trigger: CTTAGCCCATGAAAGAGATCATTGCCTGACCCAGGG...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp GTGGAAGCAGCCACAGAAGGCAGGCCAGCCATACAAAGGAAAGATGTCCAAAGCTATGGTGAATTTAAATaGCCAGTGATATCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: VEAATEGRPAIQRKDVQSYGEFK*PVISQD
Trigger: GTCCTGGGATATCACTGGTCATTTAAATTCACCATA...GCTTTGGACATCTTTCCTTTGTATGGCTGGCCTGCCTTCTGTGGCTGCTTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGGAGGGAAACCACCTTTaGCGAGAGGCCAGTGCACAG +
Preference number: 2 (lower is better)
Translates to: IHMDTKMATRDTKDDKREEGNHL*REASAQ
Trigger: CTGTGCACTGGCCTCTCGGCAAAGGTGGTTTCCCTC...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCACTGCGAATAGCCACTaGAATCCAGCCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFTANSH*NPAWAT
Trigger: TGTTGCCCAGGCTGGATTGCAGTGGCTATTCGCAGT...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCCTGAGGCAGGAGGATTaGCTGAGGACGGGAGTTCAA +
Preference number: 2 (lower is better)
Translates to: KAEILDQDCVQLVDQFGALRQED*LRTGVQ
Trigger: TTGAACTCCCGTCCTCAGGCAATCCTCCTGCCTCAG...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCTACACTGAACACAAATaGCATCTTGTTCTCCCTACT +
Preference number: 2 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSYTEHK*HLVLPT
Trigger: AGTAGGGAGAACAAGATGTCATTTGTGTTCAGTGTA...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAACCAGAGGTATATTTATaGAGTGGAAGCAGCCACAGA +
Preference number: 2 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCEPEVYL*SGSSHR
Trigger: TCTGTGGCTGCTTCCACTTCATAAATATACCTCTGG...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAATACTCCACTTCTCTTTaGGTTACTGTTTGCATGGTA +
Preference number: 2 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQYSTSL*VTVCMV
Trigger: TACCATGCAAACAGTAACTCAAAGAGAAGTGGAGTA...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCGGCCATTATCCTAAGTaGAATAACACAGGAACAGAA +
Preference number: 2 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSGHYPK*NNTGTE
Trigger: TTCTGTTCCTGTGTTATTTCACTTAGGATAATGGCC...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAACTCTGCTCACAAAGCTaGCTTTGTGTACCAAAGTTG +
Preference number: 2 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCELCSQS*LCVPKL
Trigger: CAACTTTGGTACACAAAGGCAGCTTTGTGAGCAGAG...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGCACCAACCCATCGGCTaGGTTGGGCCTCAAGGATTA +
Preference number: 2 (lower is better)
Translates to: IHMDTKMATRDTKDDKREHQPIG*VGPQGL
Trigger: TAATCCTTGAGGCCCAACGCAGCCGATGGGTTGGTG...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAATTCGAGGCTGCAGTGTaGTATGATTACAACTGCGAA +
Preference number: 2 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCEFEAAV*YDYNCE
Trigger: TTCGCAGTTGTAATCATAGCACACTGCAGCCTCGAA...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCAGGGTCCTAAGTAGGTaGCTGCCTGGATCCATGTCT +
Preference number: 2 (lower is better)
Translates to: KAEILDQDCVQLVDQFGARVLSR*LPGSMS
Trigger: AGACATGGATCCAGGCAGGCACCTACTTAGGACCCT...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCCATTTCACCATTCCCTaGAGCAGGACCCCGTGCTTT +
Preference number: 2 (lower is better)
Translates to: KAEILDQDCVQLVDQFGAHFTIP*SRTPCF
Trigger: AAAGCACGGGGTCCTGCTCCAGGGAATGGTGAAATG...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGGTGTTACCGAAGGGATaGGTGGGGAACACACAGGCA +
Preference number: 2 (lower is better)
Translates to: IHMDTKMATRDTKDDKREVLPKG*VGNTQA
Trigger: TGCCTGTGTGTTCCCCACCCATCCCTTCGGTAACAC...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCGGGCCACTTGGGGAGTaGAATTTTACTGACTCCTCA +
Preference number: 2 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFGPLGE*NFTDSS
Trigger: TGAGGAGTCAGTAAAATTCCACTCCCCAAGTGGCCC...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGAAAGCAACCTTTGTCTaGGGCAGGGCCACTTGGGGA +
Preference number: 2 (lower is better)
Translates to: IHMDTKMATRDTKDDKREKATFV*GRATWG
Trigger: TCCCCAAGTGGCCCTGCCCCAGACAAAGGTTGCTTT...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGACAGGGCTTCTGGCATaGAAACCTCCTCTGTGCCAG +
Preference number: 2 (lower is better)
Translates to: IHMDTKMATRDTKDDKRETGLLA*KPPLCQ
Trigger: CTGGCACAGAGGAGGTTTCCATGCCAGAAGCCCTGT...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CAA 90 bp AGGAAGGGCCTGTTTACTCAGCTTACACTGAACACAAATGACATCTaGTTCTCCCTACTGCTAGTGATGTGGCCTCCTGAAAAGCCTATA +
Preference number: 2 (lower is better)
Translates to: RKGLFTQLTLNTNDI*FSLLLVMWPPEKPI
Trigger: TATAGGCTTTTCAGGAGGCCACATCACTAGCAGTAGGGAGAACAAGATGTCATTTGTGTTCAGTGTAAGCTGAGTAAACAGGCCCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCTTACTCAGCTTACACTaGACACAAATGACATCTTGT +
Preference number: 2 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSLLSLH*TQMTSC
Trigger: ACAAGATGTCATTTGTGTTCAGTGTAAGCTGAGTAA...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAAAATTCCAAATTTCCATaGGAGCCAATTCACCTGGGA +
Preference number: 2 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCENSKFP*EPIHLG
Trigger: TCCCAGGTGAATTGGCTCTCATGGAAATTTGGAATT...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAAAAAACCTGGCCTTGGTaGAATGCTTTACAAGAACTC +
Preference number: 2 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCEKTWPW*NALQEL
Trigger: GAGTTCTTGTAAAGCATTTCACCAAGGCCAGGTTTT...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAAGGGAGCTGCCTCCTCTaGTCACGTGCCTTCTTCCAT +
Preference number: 2 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKGSCLL*SRAFFH
Trigger: ATGGAAGAAGGCACGTGAGCAGAGGAGGCAGCTCCC...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAAAGAATGCTTATACACTaGTGGCAGGAATGTAAATTG +
Preference number: 2 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQRMLIH*WQECKL
Trigger: CAATTTACATTCCTGCCAGCAGTGTATAAGCATTCT...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGCGTAGCACGTTCTGGTaGGGAGGGCAGTTTTCAATG +
Preference number: 2 (lower is better)
Translates to: IHMDTKMATRDTKDDKRERSTFW*GGQFSM
Trigger: CATTGAAAACTGCCCTCCCCACCAGAACGTGCTACG...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAATTCTCATTGCTTTTATaGAAGAGAGGGTTTTCAGAG +
Preference number: 2 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQFSLLL*KRGFSE
Trigger: CTCTGAAAACCCTCTCTTCCATAAAAGCAATGAGAA...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCTTCTCAGGTCTCTTCTaGGCATGTGCACAGTCCTAC +
Preference number: 2 (lower is better)
Translates to: KAEILDQDCVQLVDQFGAFSGLF*ACAQSY
Trigger: GTAGGACTGTGCACATGCCCAGAAGAGACCTGAGAA...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCTTCTGTTCCACAGACTaGATAATCTCAAATGACTTC +
Preference number: 2 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSFCSTD*IISNDF
Trigger: GAAGTCATTTGAGATTATCCAGTCTGTGGAACAGAA...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGCAAAAGTATGAAGCCTaGCTGGGAGCCAGGCATAAC +
Preference number: 2 (lower is better)
Translates to: IHMDTKMATRDTKDDKREQKYEA*LGARHN
Trigger: GTTATGCCTGGCTCCCAGTCAGGCTTCATACTTTTG...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAACTCATCAAAAGCCCTTaGGGTAGTCCCTGGGTCAGG +
Preference number: 2 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKLIKSP*GSPWVR
Trigger: CCTGACCCAGGGACTACCTCAAGGGCTTTTGATGAG...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGATACAAAAATGCCCATaGTTTCCCTGTCACCCGCCC +
Preference number: 2 (lower is better)
Translates to: IHMDTKMATRDTKDDKREIQKCP*FPCHPP
Trigger: GGGCGGGTGACAGGGAAAGCATGGGCATTTTTGTAT...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCAGCATTCAGCCTTATTaGACAAGAAGTTACAAGTTA +
Preference number: 2 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSSIQPY*TRSYKL
Trigger: TAACTTGTAACTTCTTGTGCAATAAGGCTGAATGCT...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCGGATGTGTATTTTGCTaGTGTTGGGTGGAGTGCCTT +
Preference number: 2 (lower is better)
Translates to: KAEILDQDCVQLVDQFGAGCVFC*CWVECL
Trigger: AAGGCACTCCACCCAACAGCAGCAAAATACACATCC...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATATGATCTTGGCTCACTaGAACCTCTACCTCCTGCCT +
Preference number: 2 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNMILAH*NLYLLP
Trigger: AGGCAGGAGGTAGAGGTTGCAGTGAGCCAAGATCAT...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAATACCGAAGGGATGGGTaGGGAACACACAGGCAACCT +
Preference number: 2 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKYRRDG*GTHRQP
Trigger: AGGTTGCCTGTGTGTTCCCCACCCATCCCTTCGGTA...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGGAAACCTGTTTGGAGTaGAGTGCCTACACAGGGCTT +
Preference number: 2 (lower is better)
Translates to: IHMDTKMATRDTKDDKREETCLE*SAYTGL
Trigger: AAGCCCTGTGTAGGCACTCCACTCCAAACAGGTTTC...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCGCTACTGACAGGAAGTaGGACCAGTCTTTAAGAGAA +
Preference number: 2 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFATDRK*DQSLRE
Trigger: TTCTCTTAAAGACTGGTCCCACTTCCTGTCAGTAGC...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCTTCCAGCTACTTGGGTaGCTAAGGTGGGAAGATTAC +
Preference number: 2 (lower is better)
Translates to: KAEILDQDCVQLVDQFGAFQLLG*LRWEDY
Trigger: GTAATCTTCCCACCTTAGCCACCCAAGTAGCTGGAA...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATCTTACAATCTGGTCCTaGGCTTTTCCCTGTGGGAAG +
Preference number: 2 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNLTIWS*AFPCGK
Trigger: CTTCCCACAGGGAAAAGCCCAGGACCAGATTGTAAG...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATTGGGACTTTGGCAGCTaGAATAGTCTCAGTGCTTCA +
Preference number: 2 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNWDFGS*NSLSAS
Trigger: TGAAGCACTGAGACTATTTCAGCTGCCAAAGTCCCA...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCTTATGGCCTAGCATGTaGTCTACCCCAGAGAATGTT +
Preference number: 2 (lower is better)
Translates to: KAEILDQDCVQLVDQFGALWPSM*STPENV
Trigger: AACATTCTCTGGGGTAGATCACATGCTAGGCCATAA...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGCTCATCTTTGCGAGTTaGCTTTCTTTCCCCTGCTGT +
Preference number: 2 (lower is better)
Translates to: IHMDTKMATRDTKDDKRELIFAS*LSFPCC
Trigger: ACAGCAGGGGAAAGAAAGGCAACTCGCAAAGATGAG...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGGGGTTCATTTTCCTTTaGCTTCAGGGACTGCTATGG +
Preference number: 2 (lower is better)
Translates to: IHMDTKMATRDTKDDKREGFIFL*LQGLLW
Trigger: CCATAGCAGTCCCTGAAGGCAAAGGAAAATGAACCC...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAAGAACGTAGCACGTTCTaGTGGGGAGGGCAGTTTTCA +
Preference number: 2 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKERSTF*WGGQFS
Trigger: TGAAAACTGCCCTCCCCACCAGAACGTGCTACGTTC...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAACCTACACAGGGCTTCTaGCATGGAAACCTCCTCTGT +
Preference number: 2 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKPTQGF*HGNLLC
Trigger: ACAGAGGAGGTTTCCATGCCAGAAGCCCTGTGTAGG...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATGTCAGACGAAAGAGCTaGGGAATTCTCAGGTCTCTT +
Preference number: 2 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNVRRKS*GILRSL
Trigger: AAGAGACCTGAGAATTCCCCAGCTCTTTCGTCTGAC...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGTCTCTCATGCTTATTTaGTGCTTACAGGTTCAGGGC +
Preference number: 2 (lower is better)
Translates to: IHMDTKMATRDTKDDKRESLMLI*CLQVQG
Trigger: GCCCTGAACCTGTAAGCATCAAATAAGCATGAGAGA...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGGGTGGGAAGATTACTTaGAACCAGAAGTTTGAGGCT +
Preference number: 2 (lower is better)
Translates to: IHMDTKMATRDTKDDKREGGKIT*NQKFEA
Trigger: AGCCTCAAACTTCTGGTTTCAAGTAATCTTCCCACC...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCCTGGCCTTGGTGAAATaGTTTACAAGAACTCGATAC +
Preference number: 2 (lower is better)
Translates to: KAEILDQDCVQLVDQFGALALVK*FTRTRY
Trigger: GTATCGAGTTCTTGTAAAGCATTTCACCAAGGCCAG...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCTCTGCTACTATGTATTaGATTGGAGAGGGGTTCATT +
Preference number: 2 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFSATMY*IGEGFI
Trigger: AATGAACCCCTCTCCAATGCAATACATAGTAGCAGA...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCTGCTGTTGGGTGGAGTaGCTTGTAGATATTTGTCAA +
Preference number: 2 (lower is better)
Translates to: KAEILDQDCVQLVDQFGACCWVE*LVDICQ
Trigger: TTGACAAATATCTACAAGGCACTCCACCCAACAGCA...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGGTGTCAAGGACATCATaGAAGGGAAAGGAACAGTTC +
Preference number: 2 (lower is better)
Translates to: IHMDTKMATRDTKDDKREVSRTS*KGKEQF
Trigger: GAACTGTTCCTTTCCCTTCCATGATGTCCTTGACAC...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGTGTTGGCTTATGTATTaGGTAACATCCTGGGGTCAG +
Preference number: 2 (lower is better)
Translates to: IHMDTKMATRDTKDDKRECWLMY*VTSWGQ
Trigger: CTGACCCCAGGATGTTACCCAATACATAAGCCAACA...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGTATGTGAAACCTGTTTaGAGTGGAGTGCCTACACAG +
Preference number: 2 (lower is better)
Translates to: IHMDTKMATRDTKDDKREYVKPV*SGVPTQ
Trigger: CTGTGTAGGCACTCCACTCCAAACAGGTTTCACATA...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATCTTCAGGGACTGCTATaGTTTGAATGTGTTCCCCAA +
Preference number: 2 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNLQGLL*FECVPQ
Trigger: TTGGGGAACACATTCAAACCATAGCAGTCCCTGAAG...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CAA 90 bp TGCGTTGGGCCTCAAGGATTAATGACTACAACTGACTGTTTTATTTaGCTCTACAGGCAAACTTTTAAATCTGTATTCTGGGTAACCCCC +
Preference number: 2 (lower is better)
Translates to: CVGPQGLMTTTDCFI*LYRQTFKSVFWVTP
Trigger: GGGGGTTACCCAGAATACAGATTTAAAAGTTTGCCTGTAGAGCAAAATAAAACAGTCAGTTGTAGTCATTAATCCTTGAGGCCCAACGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CAA 90 bp AATTATGCTTGCAACAATCTTCAAGTTCTGCTACTATGTATTGCATaGGAGAGGGGTTCATTTTCCTTTGCCTTCAGGGACTGCTATGGT +
Preference number: 2 (lower is better)
Translates to: NYACNNLQVLLLCIA*ERGSFSFAFRDCYG
Trigger: ACCATAGCAGTCCCTGAAGGCAAAGGAAAATGAACCCCTCTCCAATGCAATACATAGTAGCAGAACTTGAAGATTGTTGCAAGCATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CAA 90 bp AAAGGAATTATGCTTGCAACAATCTTCAAGTTCTGCTACTATGTATaGCATTGGAGAGGGGTTCATTTTCCTTTGCCTTCAGGGACTGCT +
Preference number: 2 (lower is better)
Translates to: KGIMLATIFKFCYYV*HWRGVHFPLPSGTA
Trigger: AGCAGTCCCTGAAGGCAAAGGAAAATGAACCCCTCTCCAATGCAATACATAGTAGCAGAACTTGAAGATTGTTGCAAGCATAATTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CAA 90 bp AGAATGTTCCATGTGCACTTGAGAAGGATGTGTATTTTGCTGCTGTaGGGTGGAGTGCCTTGTAGATATTTGTCAAGTCTAGTTGGTTTA +
Preference number: 2 (lower is better)
Translates to: RMFHVHLRRMCILLL*GGVPCRYLSSLVGL
Trigger: TAAACCAACTAGACTTGACAAATATCTACAAGGCACTCCACCCAACAGCAGCAAAATACACATCCTTCTCAAGTGCACATGGAACATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAAACCTCCAATATGCTCTaGCGTCCAATCCATAGTCCA +
Preference number: 2 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKTSNML*RPIHSP
Trigger: TGGACTATGGATTGGACGTCAGAGCATATTGGAGGT...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGAGGCATATTGCTGTCTaGGGTTCTGATTTAACTGTC +
Preference number: 2 (lower is better)
Translates to: IHMDTKMATRDTKDDKRERHIAV*GSDLTV
Trigger: GACAGTTAAATCAGAACCTCAGACAGCAATATGCCT...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATACAGCAATACAAAAATaGCCATGCTTTCCCTGTCAC +
Preference number: 2 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNTAIQK*PCFPCH
Trigger: GTGACAGGGAAAGCATGGGCATTTTTGTATTGCTGT...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCGTTGTTACTCTATTATaGCCACTGATGTCCTCTCAT +
Preference number: 2 (lower is better)
Translates to: KAEILDQDCVQLVDQFGAVVTLL*PLMSSH
Trigger: ATGAGAGGACATCAGTGGGCATAATAGAGTAACAAC...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATCAAATTATTGCTGACTaGAGTCACCCTGTTGTGCTA +
Preference number: 2 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNQIIAD*SHPVVL
Trigger: TAGCACAACAGGGTGACTGCAGTCAGCAATAATTTG...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCATTGCTGCAAGCCTCTaGTTAATGTCTAGACAGTTT +
Preference number: 2 (lower is better)
Translates to: KAEILDQDCVQLVDQFGAIAASL*LMSRQF
Trigger: AAACTGTCTAGACATTAACCAGAGGCTTGCAGCAAT...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCGACACTCTTCTCAATTaGGGAGTATTTTCTTCTCTT +
Preference number: 2 (lower is better)
Translates to: KAEILDQDCVQLVDQFGADTLLN*GVFSSL
Trigger: AAGAGAAGAAAATACTCCTCAATTGAGAAGAGTGTC...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCACATCACCATTAATATaGTGTAGGCTGTGGGTTTTT +
Preference number: 2 (lower is better)
Translates to: KAEILDQDCVQLVDQFGATSPLI*CRLWVF
Trigger: AAAAACCCACAGCCTACATCATATTAATGGTGATGT...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATTACTGCAGCCTTGTTTaGAATAGCCAAGATTTGGAA +
Preference number: 2 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNYCSLV*NSQDLE
Trigger: TTCCAAATCTTGGCTATTGCAAACAAGGCTGCAGTA...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGAGTAGAAATGAGGAATaGAGCACACATAGGCATGAA +
Preference number: 2 (lower is better)
Translates to: IHMDTKMATRDTKDDKRESRNEE*STHRHE
Trigger: TTCATGCCTATGTGTGCTCCATTCCTCATTTCTACT...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAACCTACACGTTCTAACTaGGTATACATCTTCCCAGGA +
Preference number: 2 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKPTRSN*VYIFPG
Trigger: TCCTGGGAAGATGTATACCCAGTTAGAACGTGTAGG...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGAAGTGGGAAAGGTTTTaGCCACTATTTCTTCCAGTA +
Preference number: 2 (lower is better)
Translates to: IHMDTKMATRDTKDDKREKWERF*PLFLPV
Trigger: TACTGGAAGAAATAGTGGCCAAAACCTTTCCCACTT...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGTGTTTTTCCTCAAAGTaGGAAAGGTTTTGGCCACTA +
Preference number: 2 (lower is better)
Translates to: IHMDTKMATRDTKDDKRECFSSK*ERFWPL
Trigger: TAGTGGCCAAAACCTTTCCCACTTTGAGGAAAAACA...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCTTGGTTGAACCACTGTaGAAAGAAGTTTGGAGATTT +
Preference number: 2 (lower is better)
Translates to: KAEILDQDCVQLVDQFGALVEPL*KEVWRF
Trigger: AAATCTCCAAACTTCTTTCCACAGTGGTTCAACCAA...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATACAGTACACATTTGTTaGGATTTACAAGACACTGTG +
Preference number: 2 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNTVHIC*DLQDTV
Trigger: CACAGTGTCTTGTAAATCTCAACAAATGTGTACTGT...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR TCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGCTCTATTATGCCCACTaGTGTCCTCTCATAATTTTT +
Preference number: 2 (lower is better)
Translates to: IHMDTKMATRDTKDDKRELYYAH*CPLIIF
Trigger: AAAAATTATGAGAGGACATCAGTGGGCATAATAGAG...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR GCA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAAGGTTCAGGGCAGACTTaGCACTTTGTTTCTAAAACA +
Preference number: 2 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKGSGQT*HFVSKT
Trigger: TGTTTTAGAAACAAAGTGGCAAGTCTGCCCTGAACC...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAAAAAACTAAGGACTGTTaGTGCATGCTTGTACAGAGC +
Preference number: 2 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKKTKDC*CMLVQS
Trigger: GCTCTGTACAAGCATGCACCAACAGTCCTTAGTTTT...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
39% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCAGCAGATTTATTATCTaGCCTTTTACAGAAAGTCTG +
Preference number: 2 (lower is better)
Translates to: KAEILDQDCVQLVDQFGASRFII*PFTESL
Trigger: CAGACTTTCTGTAAAAGGCCAGATAATAAATCTGCT...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCCTAAAATATGGGTTATaGGAGAACTTCAGGTTAAGA +
Preference number: 2 (lower is better)
Translates to: KAEILDQDCVQLVDQFGALKYGL*ENFRLR
Trigger: TCTTAACCTGAAGTTCTCCCATAACCCATATTTTAG...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATTACTATGTATTGCATTaGAGAGGGGTTCATTTTCCT +
Preference number: 2 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNYYVLH*RGVHFP
Trigger: AGGAAAATGAACCCCTCTCCAATGCAATACATAGTA...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGACCAAAAAGGCCAAATaGCAATTCTCTGGTAATGAA +
Preference number: 2 (lower is better)
Translates to: IHMDTKMATRDTKDDKRETKKAK*QFSGNE
Trigger: TTCATTACCAGAGAATTGCCATTTGGCCTTTTTGGT...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAATTTAAATCTGTATTCTaGGTAACCCCCAGGACGTTT +
Preference number: 2 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKFKSVF*VTPRTF
Trigger: AAACGTCCTGGGGGTTACCCAGAATACAGATTTAAA...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATTTCCCAAGAGATTATTaGTCTGCTATTTGCTTTTCT +
Preference number: 2 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNFPRDY*SAICFS
Trigger: AGAAAAGCAAATAGCAGACCAATAATCTCTTGGGAA...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CAA 90 bp TTCTCCACTTCACCCCAAGGTAACACCCTCACATCCTATCAACTATaGCTGTACCTAAGAAATAATTTCTATCATTATTGCCTTTTTCAT +
Preference number: 2 (lower is better)
Translates to: FSTSPQGNTLTSYQL*LYLRNNFYHYCLFH
Trigger: ATGAAAAAGGCAATAATGATAGAAATTATTTCTTAGGTACAGCAATAGTTGATAGGATGTGAGGGTGTTACCTTGGGGTGAAGTGGAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CAA 90 bp ATCATTTCTGTCATGAACATTCCAATTGTACTTCCTCAGTTATTTTaGAAGGTACAACAAATTATTGCTGACTGCAGTCACCCTGTTGTG +
Preference number: 2 (lower is better)
Translates to: IISVMNIPIVLPQLF*KVQQIIADCSHPVV
Trigger: CACAACAGGGTGACTGCAGTCAGCAATAATTTGTTGTACCTTCAAAAATAACTGAGGAAGTACAATTGGAATGTTCATGACAGAAATGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CAA 90 bp AATGTTGAAGTGACAAGAATAAATATACTTGTTTTGTGCCTGATATaGGGAAGAAAGCTCCCAACTGGAGCTTTCACATCACCATTAATA +
Preference number: 2 (lower is better)
Translates to: NVEVTRINILVLCLI*GRKLPTGAFTSPLI
Trigger: TATTAATGGTGATGTGAAAGCTCCAGTTGGGAGCTTTCTTCCCAATATCAGGCACAAAACAAGTATATTTATTCTTGTCACTTCAACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR GCA 72 bp CTGCAGTGGGTGGGAGGCACCGACCAGAGGTCCCAGTaGCCTGCCGTTCCCGGGGAGAGGGGAAGGAGCTCT +
Preference number: 3 (lower is better)
Translates to: LQWVGGTDQRSQ*PAVPGERGRSS
Trigger: AGAGCTCCTTCCCCTCTCCCCGGGAACGGCAGGGCACTGGGACCTCTGGTCGGTGCCTCCCACCCACTGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 72 bp GTGGCTGCTCTGCTGCTGGATGTCAGCATGATTGTGTaGCCGAGGCTGTTGTGGAGCTGGGGAAAGGGGGAG +
Preference number: 3 (lower is better)
Translates to: VAALLLDVSMIV*PRLLWSWGKGE
Trigger: CTCCCCCTTTCCCCAGCTCCACAACAGCCTCGGCCACACAATCATGCTGACATCCAGCAGCAGAGCAGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR GCA 72 bp GCTTTGGGCCTGTCCACTCTCAGGGTCCTAAGTAGGTaGCTGCCTGGATCCATGTCTGCTTGCACCCTGCAC +
Preference number: 3 (lower is better)
Translates to: ALGLSTLRVLSR*LPGSMSACTLH
Trigger: GTGCAGGGTGCAAGCAGACATGGATCCAGGCAGGCACCTACTTAGGACCCTGAGAGTGGACAGGCCCAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR GCA 72 bp GAGGAGTTCCAATCCCCTTCTGAGCCCTACGGTGGCTaGTCTGCTGCTGGATGTCAGCATGATTGTGTGGCC +
Preference number: 3 (lower is better)
Translates to: EEFQSPSEPYGG*SAAGCQHDCVA
Trigger: GGCCACACAATCATGCTGACATCCAGCAGCAGAGCAGCCACCGTAGGGCTCAGAAGGGGATTGGAACTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR TCA 72 bp TGGGTGGGGAACACACAGGCAACCTCCAATATGCTCTaGCGTCCAATCCATAGTCCAGAGCAGTGGGGCTGC +
Preference number: 3 (lower is better)
Translates to: WVGNTQATSNML*RPIHSPEQWGC
Trigger: GCAGCCCCACTGCTCTGGACTATGGATTGGACGTCAGAGCATATTGGAGGTTGCCTGTGTGTTCCCCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAAGGGGGAAAGCAACCTTaGTCTGGGGCAGGGCCACTT +
Preference number: 3 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQGGKQP*SGAGPL
Trigger: AAGTGGCCCTGCCCCAGACAAAGGTTGCTTTCCCCC...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR TCA 72 bp TTTGGGGCCCAACCCGCACAAACCCTGACAGGTGACTaGCCAAACACCATCAGGAAGGTGATGAGGGAAACC +
Preference number: 3 (lower is better)
Translates to: FGAQPAQTLTGD*PNTIRKVMRET
Trigger: GGTTTCCCTCATCACCTTCCTGATGGTGTTTGGTCAGTCACCTGTCAGGGTTTGTGCGGGTTGGGCCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR TCA 72 bp CTGTTTTGGGGCCCAACCCGCACAAACCCTGACAGGTaGCTGACCAAACACCATCAGGAAGGTGATGAGGGA +
Preference number: 3 (lower is better)
Translates to: LFWGPTRTNPDR*LTKHHQEGDEG
Trigger: TCCCTCATCACCTTCCTGATGGTGTTTGGTCAGTCACCTGTCAGGGTTTGTGCGGGTTGGGCCCCAAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR GCA 72 bp AGGGATGGGTGGGGAACACACAGGCAACCTCCAATATaGTCTGACGTCCAATCCATAGTCCAGAGCAGTGGG +
Preference number: 3 (lower is better)
Translates to: RDGWGTHRQPPI*SDVQSIVQSSG
Trigger: CCCACTGCTCTGGACTATGGATTGGACGTCAGAGCATATTGGAGGTTGCCTGTGTGTTCCCCACCCATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAAACTGAGGCAGGAGGATaGCCTGAGGACGGGAGTTCA +
Preference number: 3 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQTEAGG*PEDGSS
Trigger: TGAACTCCCGTCCTCAGGCAATCCTCCTGCCTCAGT...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 72 bp GAGCTTAGTGTGGCAGAGTGTTACCGAAGGGATGGGTaGGGAACACACAGGCAACCTCCAATATGCTCTGAC +
Preference number: 3 (lower is better)
Translates to: ELSVAECYRRDG*GTHRQPPICSD
Trigger: GTCAGAGCATATTGGAGGTTGCCTGTGTGTTCCCCACCCATCCCTTCGGTAACACTCTGCCACACTAAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR TCA 72 bp GGCATGGAAACCTCCTCTGTGCCAGAGGTATATTTATaGAGTGGAAGCAGCCACAGAAGGCAGGCCAGCCAT +
Preference number: 3 (lower is better)
Translates to: GMETSSVPEVYL*SGSSHRRQASH
Trigger: ATGGCTGGCCTGCCTTCTGTGGCTGCTTCCACTTCATAAATATACCTCTGGCACAGAGGAGGTTTCCATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 72 bp CTGGATAAAGAGCAATCCAGTCATTTCACCATTCCCTaGAGCAGGACCCCGTGCTTTTTCCAAGGCAGCAGG +
Preference number: 3 (lower is better)
Translates to: LDKEQSSHFTIP*SRTPCFFQGSR
Trigger: CCTGCTGCCTTGGAAAAAGCACGGGGTCCTGCTCCAGGGAATGGTGAAATGACTGGATTGCTCTTTATCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 72 bp AAGGACTGTTGGTGCATGCTTGTACAGAGCTTAGTGTaGCAGAGTGTTACCGAAGGGATGGGTGGGGAACAC +
Preference number: 3 (lower is better)
Translates to: KDCWCMLVQSLV*QSVTEGMGGEH
Trigger: GTGTTCCCCACCCATCCCTTCGGTAACACTCTGCCACACTAAGCTCTGTACAAGCATGCACCAACAGTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 72 bp TCAGACGAAAGAGCTGGGGAATTCTCAGGTCTCTTCTaGGCATGTGCACAGTCCTACACATGTGTGTGGCCT +
Preference number: 3 (lower is better)
Translates to: SDERAGEFSGLF*ACAQSYTCVWP
Trigger: AGGCCACACACATGTGTAGGACTGTGCACATGCCCAGAAGAGACCTGAGAATTCCCCAGCTCTTTCGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCCGATGGGCTGGGACTTaGGCAGCTGAAATAGTCTCA +
Preference number: 3 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSRWAGT*AAEIVS
Trigger: TGAGACTATTTCAGCTGCCAAAGTCCCAGCCCATCG...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAAAGGTTCAAGCGATTCTaGTGCCTCAGCCATCAGAGT +
Preference number: 3 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQRFKRF*CLSHQS
Trigger: ACTCTGATGGCTGAGGCACAAGAATCGCTTGAACCT...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR TCA 72 bp GTTCTGGTGGGGAGGGCAGTTTTCAATGGGTTGCTGTaGTTTCCAGGACACTCTAGGAAGGGCCTGTTTACT +
Preference number: 3 (lower is better)
Translates to: VLVGRAVFNGLL*FPGHSRKGLFT
Trigger: AGTAAACAGGCCCTTCCTAGAGTGTCCTGGAAATCACAGCAACCCATTGAAAACTGCCCTCCCCACCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR TCA 72 bp TCAAGGCATCTCAAGGCATATTGCTGTCTGAGGTTCTaGTTTAACTGTCCGGGGGTACAGGGGAAGAGTGGG +
Preference number: 3 (lower is better)
Translates to: SRHLKAYCCLRF*FNCPGVQGKSG
Trigger: CCCACTCTTCCCCTGTACCCCCGGACAGTTAAATCAGAACCTCAGACAGCAATATGCCTTGAGATGCCTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR GCA 72 bp TGCTCACGTGCCTTCTTCCATCTCATCTTTGCGAGTTaGCTTTCTTTCCCCTGCTGTGGGCTGGATAAAGAG +
Preference number: 3 (lower is better)
Translates to: CSRAFFHLIFAS*LSFPCCGLDKE
Trigger: CTCTTTATCCAGCCCACAGCAGGGGAAAGAAAGGCAACTCGCAAAGATGAGATGGAAGAAGGCACGTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR GCA 72 bp AAACACCATCAGGAAGGTGATGAGGGAAACCACCTTTaGCGAGAGGCCAGTGCACAGCACAAAACTAAGGAC +
Preference number: 3 (lower is better)
Translates to: KHHQEGDEGNHL*REASAQHKTKD
Trigger: GTCCTTAGTTTTGTGCTGTGCACTGGCCTCTCGGCAAAGGTGGTTTCCCTCATCACCTTCCTGATGGTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR GCA 72 bp CGATCCTCCCACCTCAGCCACCACCACATGCCACCATaGCCGGCTAATTATATGGTGAATTTAAATGACCAG +
Preference number: 3 (lower is better)
Translates to: RSSHLSHHHMPP*PANYMVNLNDQ
Trigger: CTGGTCATTTAAATTCACCATATAATTAGCCGGGCATGGTGGCATGTGGTGGTGGCTGAGGTGGGAGGATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR GCA 72 bp AAGAGCTGGGGAATTCTCAGGTCTCTTCTGGGCATGTaGACAGTCCTACACATGTGTGTGGCCTTCTGCATT +
Preference number: 3 (lower is better)
Translates to: KSWGILRSLLGM*TVLHMCVAFCI
Trigger: AATGCAGAAGGCCACACACATGTGTAGGACTGTGCACATGCCCAGAAGAGACCTGAGAATTCCCCAGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 72 bp CGAGAGGCCAGTGCACAGCACAAAACTAAGGACTGTTaGTGCATGCTTGTACAGAGCTTAGTGTGGCAGAGT +
Preference number: 3 (lower is better)
Translates to: REASAQHKTKDC*CMLVQSLVWQS
Trigger: ACTCTGCCACACTAAGCTCTGTACAAGCATGCACCAACAGTCCTTAGTTTTGTGCTGTGCACTGGCCTCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 72 bp GACTTGCCAGGGACCCAGAACCCTACACGTTCTAACTaGGTATACATCTTCCCAGGATCCGATCAGATCTCA +
Preference number: 3 (lower is better)
Translates to: DLPGTQNPTRSN*VYIFPGSDQIS
Trigger: TGAGATCTGATCGGATCCTGGGAAGATGTATACCCAGTTAGAACGTGTAGGGTTCTGGGTCCCTGGCAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR GCA 72 bp GAGGCCAGTGCACAGCACAAAACTAAGGACTGTTGGTaGATGCTTGTACAGAGCTTAGTGTGGCAGAGTGTT +
Preference number: 3 (lower is better)
Translates to: EASAQHKTKDCW*MLVQSLVWQSV
Trigger: AACACTCTGCCACACTAAGCTCTGTACAAGCATGCACCAACAGTCCTTAGTTTTGTGCTGTGCACTGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR GCA 72 bp CCCATCTCAGAATTTCCCAAACACCAACCCATCGGCTaGGTTGGGCCTCAAGGATTAATGACTACAACTGAC +
Preference number: 3 (lower is better)
Translates to: PISEFPKHQPIG*VGPQGLMTTTD
Trigger: GTCAGTTGTAGTCATTAATCCTTGAGGCCCAACGCAGCCGATGGGTTGGTGTTTGGGAAATTCTGAGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 72 bp GCACACATAGGCATGAAGAAAGAACGTAGCACGTTCTaGTGGGGAGGGCAGTTTTCAATGGGTTGCTGTGAT +
Preference number: 3 (lower is better)
Translates to: AHIGMKKERSTF*WGGQFSMGCCD
Trigger: ATCACAGCAACCCATTGAAAACTGCCCTCCCCACCAGAACGTGCTACGTTCTTTCTTCATGCCTATGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 72 bp AAACCTGTTTGGAGTGGAGTGCCTACACAGGGCTTCTaGCATGGAAACCTCCTCTGTGCCAGAGGTATATTT +
Preference number: 3 (lower is better)
Translates to: KPVWSGVPTQGF*HGNLLCARGIF
Trigger: AAATATACCTCTGGCACAGAGGAGGTTTCCATGCCAGAAGCCCTGTGTAGGCACTCCACTCCAAACAGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 72 bp CACTGGGAATGTGTCATAGTGTATGTGAAACCTGTTTaGAGTGGAGTGCCTACACAGGGCTTCTGGCATGGA +
Preference number: 3 (lower is better)
Translates to: HWECVIVYVKPV*SGVPTQGFWHG
Trigger: TCCATGCCAGAAGCCCTGTGTAGGCACTCCACTCCAAACAGGTTTCACATACACTATGACACATTCCCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 72 bp CTGTTTGTGCAGACACTTAAGGTCAGACGAAAGAGCTaGGGAATTCTCAGGTCTCTTCTGGGCATGTGCACA +
Preference number: 3 (lower is better)
Translates to: LFVQTLKVRRKS*GILRSLLGMCT
Trigger: TGTGCACATGCCCAGAAGAGACCTGAGAATTCCCCAGCTCTTTCGTCTGACCTTAAGTGTCTGCACAAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCTCTTCCATCTCATCTTaGCGAGTTGCCTTTCTTTCC +
Preference number: 3 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSSSISS*RVAFLS
Trigger: GGAAAGAAAGGCAACTCGCAAAGATGAGATGGAAGA...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAAGGCAGACTTGCCACTTaGTTTCTAAAACATGCAGAG +
Preference number: 3 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQGRLAT*FLKHAE
Trigger: CTCTGCATGTTTTAGAAACAAAGTGGCAAGTCTGCC...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 72 bp CACATAGGCATGAAGAAAGAACGTAGCACGTTCTGGTaGGGAGGGCAGTTTTCAATGGGTTGCTGTGATTTC +
Preference number: 3 (lower is better)
Translates to: HIGMKKERSTFW*GGQFSMGCCDF
Trigger: GAAATCACAGCAACCCATTGAAAACTGCCCTCCCCACCAGAACGTGCTACGTTCTTTCTTCATGCCTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 72 bp GTAGCACTTACATGGACCAAAAGTATGAAGCCTGACTaGGAGCCAGGCATAACCTTCTGTGTCAAGGACATC +
Preference number: 3 (lower is better)
Translates to: VALTWTKSMKPD*EPGITFCVKDI
Trigger: GATGTCCTTGACACAGAAGGTTATGCCTGGCTCCCAGTCAGGCTTCATACTTTTGGTCCATGTAAGTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 72 bp TGTTTGGAGTGGAGTGCCTACACAGGGCTTCTGGCATaGAAACCTCCTCTGTGCCAGAGGTATATTTATGAA +
Preference number: 3 (lower is better)
Translates to: CLEWSAYTGLLA*KPPLCQRYIYE
Trigger: TTCATAAATATACCTCTGGCACAGAGGAGGTTTCCATGCCAGAAGCCCTGTGTAGGCACTCCACTCCAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAACTACTATGTATTGCATaGGAGAGGGGTTCATTTTCC +
Preference number: 3 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQLLCIA*ERGSFS
Trigger: GGAAAATGAACCCCTCTCCAATGCAATACATAGTAG...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCTTGCTAGTGTTCTCATaGCTTTTATGGAAGAGAGGG +
Preference number: 3 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSLLVFS*LLWKRG
Trigger: CCCTCTCTTCCATAAAAGCAATGAGAACACTAGCAA...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGGCAGCATATGCTGTTTaGGGGCCCAACCCGCACAAA +
Preference number: 3 (lower is better)
Translates to: IHMDTKMATRDTKDDKREAAYAV*GPNPHK
Trigger: TTTGTGCGGGTTGGGCCCCAAAACAGCATATGCTGC...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAAGCATCTCAAGGCATATaGCTGTCTGAGGTTCTGATT +
Preference number: 3 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCEASQGI*LSEVLI
Trigger: AATCAGAACCTCAGACAGCAATATGCCTTGAGATGC...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAATTGAAGGACAATCTGTaGGCTTATGTATTGGGTAAC +
Preference number: 3 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQLKDNL*AYVLGN
Trigger: GTTACCCAATACATAAGCCAACAGATTGTCCTTCAA...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAAAGGAATGTAAATTGGTaGAACCACTGTGGAAAGAAG +
Preference number: 3 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQRNVNW*NHCGKK
Trigger: CTTCTTTCCACAGTGGTTCAACCAATTTACATTCCT...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCATGTTCCATGTGCACTaGAGAAGGATGTGTATTTTG +
Preference number: 3 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSMFHVH*RRMCIL
Trigger: CAAAATACACATCCTTCTCAAGTGCACATGGAACAT...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAAGGACACTCTTCTCAATaGAGGAGTATTTTCTTCTCT +
Preference number: 3 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQGHSSQ*RSIFFS
Trigger: AGAGAAGAAAATACTCCTCAATTGAGAAGAGTGTCC...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAATTTCTTGTGACATCTTaGTCTGGTTTTGGTATCAGG +
Preference number: 3 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQFLVTS*SGFGIR
Trigger: CCTGATACCAAAACCAGACAAAGATGTCACAAGAAA...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR TCA 72 bp CATGTGATCTACCCCAGAGAATGTTCCATGTGCACTTaGGAAGGATGTGTATTTTGCTGCTGTTGGGTGGAG +
Preference number: 3 (lower is better)
Translates to: HVIYPRECSMCT*EGCVFCCCWVE
Trigger: CTCCACCCAACAGCAGCAAAATACACATCCTTCTCAAGTGCACATGGAACATTCTCTGGGGTAGATCACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR GCA 72 bp TTCCATCTCATCTTTGCGAGTTGCCTTTCTTTCCCCTaGTGTGGGCTGGATAAAGAGCAATCCAGTCATTTC +
Preference number: 3 (lower is better)
Translates to: FHLIFASCLSFP*CGLDKEQSSHF
Trigger: GAAATGACTGGATTGCTCTTTATCCAGCCCACAGCAGGGGAAAGAAAGGCAACTCGCAAAGATGAGATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR GCA 72 bp ACATCCTGGGGTCAGCAAATTACTGCACATCTGGCCTaGTTTTATACGGCCTATGAGCTAAGAGTTGGAGAA +
Preference number: 3 (lower is better)
Translates to: TSWGQQITAHLA*FYTAYELRVGE
Trigger: TTCTCCAACTCTTAGCTCATAGGCCGTATAAAAGCAGGCCAGATGTGCAGTAATTTGCTGACCCCAGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCTCTCATCTTTGCGAGTaGCCTTTCTTTCCCCTGCTG +
Preference number: 3 (lower is better)
Translates to: KAEILDQDCVQLVDQFGASHLCE*PFFPLL
Trigger: CAGCAGGGGAAAGAAAGGCAACTCGCAAAGATGAGA...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATGACTCCATTCCTCTCTaGCCATGTGATGCCTTCTGC +
Preference number: 3 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNDSIPL*PCDAFC
Trigger: GCAGAAGGCATCACATGGCAAGAGAGGAATGGAGTC...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR GCA 72 bp GGCATGTGCACAGTCCTACACATGTGTGTGGCCTTCTaGATTCTTAGGAATAGGTTGAAGCTTTTCAAAACG +
Preference number: 3 (lower is better)
Translates to: GMCTVLHMCVAF*ILRNRLKLFKT
Trigger: CGTTTTGAAAAGCTTCAACCTATTCCTAAGAATGCAGAAGGCCACACACATGTGTAGGACTGTGCACATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 72 bp TACAAGAACTCGATACACAAGACACGTAAGAAACGATaGGCTGGGACTTTGGCAGCTGAAATAGTCTCAGTG +
Preference number: 3 (lower is better)
Translates to: YKNSIHKTRKKR*AGTLAAEIVSV
Trigger: CACTGAGACTATTTCAGCTGCCAAAGTCCCAGCCCATCGTTTCTTACGTGTCTTGTGTATCGAGTTCTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 72 bp ATGTTTACTGCAGCCTTGTTTGCAATAGCCAAGATTTaGAAGCGACCTAAGTGTCCATCAGCAGATGAATGG +
Preference number: 3 (lower is better)
Translates to: MFTAALFAIAKI*KRPKCPSADEW
Trigger: CCATTCATCTGCTGATGGACACTTAGGTCGCTTCCAAATCTTGGCTATTGCAAACAAGGCTGCAGTAAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCTCTTCCTACTGTCACTaGTCCTCATCAAAAGCCCTT +
Preference number: 3 (lower is better)
Translates to: KAEILDQDCVQLVDQFGASSYCH*SSSKAL
Trigger: AAGGGCTTTTGATGAGGACAAGTGACAGTAGGAAGA...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATTCTCCAGTACAGATTTaGTGTCCAGAACCAGAGCCA +
Preference number: 3 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNSPVQI*CPEPEP
Trigger: TGGCTCTGGTTCTGGACACAAAATCTGTACTGGAGA...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAATTTAAAAACCTGGCCTaGGTGAAATGCTTTACAAGA +
Preference number: 3 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCEFKNLA*VKCFTR
Trigger: TCTTGTAAAGCATTTCACCAAGGCCAGGTTTTTAAA...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATTGTATTTTGCTGCTGTaGGGTGGAGTGCCTTGTAGA +
Preference number: 3 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNCILLL*GGVPCR
Trigger: TCTACAAGGCACTCCACCCAACAGCAGCAAAATACA...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATCAGGGTTTTACCATGTaGGCCAAGCTGGTCTTGAAT +
Preference number: 3 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNQGFTM*AKLVLN
Trigger: ATTCAAGACCAGCTTGGCCAACATGGTAAAACCCTG...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR TCA 72 bp TATACAACCATGCAGCCATCACCACAATTAAAACAATaGATTAAACCACCACTACCCAGTATCCTCCTGCCC +
Preference number: 3 (lower is better)
Translates to: YTTMQPSPQLKQ*IKPPLPSILLP
Trigger: GGGCAGGAGGATACTGGGTAGTGGTGGTTTAATTCATTGTTTTAATTGTGGTGATGGCTGCATGGTTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 72 bp GCAACAATCTTCAAGTTCTGCTACTATGTATTGCATTaGAGAGGGGTTCATTTTCCTTTGCCTTCAGGGACT +
Preference number: 3 (lower is better)
Translates to: ATIFKFCYYVLH*RGVHFPLPSGT
Trigger: AGTCCCTGAAGGCAAAGGAAAATGAACCCCTCTCCAATGCAATACATAGTAGCAGAACTTGAAGATTGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 72 bp AGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATaGCAATTCTCTGGTAATGAAGCTTTGGAGGAGTTC +
Preference number: 3 (lower is better)
Translates to: SRDLHGTTKKAK*QFSGNEALEEF
Trigger: GAACTCCTCCAAAGCTTCATTACCAGAGAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 72 bp ATGTTTATCACAGTGCTATTCACAAGAGCAAAGACATaGAATCAACCTAGGTGCCCATCAACAGTGGATTGG +
Preference number: 3 (lower is better)
Translates to: MFITVLFTRAKT*NQPRCPSTVDW
Trigger: CCAATCCACTGTTGATGGGCACCTAGGTTGATTCCATGTCTTTGCTCTTGTGAATAGCACTGTGATAAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATCTCTCTCATGCTTATTaGATGCTTACAGGTTCAGGG +
Preference number: 3 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNLSHAY*MLTGSG
Trigger: CCCTGAACCTGTAAGCATCAAATAAGCATGAGAGAG...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGAAGGCCCTACATGGTTaGCAAAGCCTAGCAGATTTA +
Preference number: 3 (lower is better)
Translates to: IHMDTKMATRDTKDDKREKALHG*QSLADL
Trigger: TAAATCTGCTAGGCTTTGCAAACCATGTAGGGCCTT...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATGTTTTGTGCCTGATATaGGGAAGAAAGCTCCCAACT +
Preference number: 3 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNVLCLI*GRKLPT
Trigger: AGTTGGGAGCTTTCTTCCCAATATCAGGCACAAAAC...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR TCA 72 bp CTTATACACAATGGAGTACTGTTCAGCCATAAAGAGTaGGATCCTGTCACTTCCAACAACATGGATGGAACT +
Preference number: 3 (lower is better)
Translates to: LIHNGVLFSHKE*DPVTSNNMDGT
Trigger: AGTTCCATCCATGTTGTTGGAAGTGACAGGATCTCACTCTTTATGGCTGAACAGTACTCCATTGTGTATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR TCA 72 bp AAGCTCCCAACTGGAGCTTTCACATCACCATTAATATaGTGTAGGCTGTGGGTTTTTCCAAAGATGCTCTTT +
Preference number: 3 (lower is better)
Translates to: KLPTGAFTSPLI*CRLWVFPKMLF
Trigger: AAAGAGCATCTTTGGAAAAACCCACAGCCTACATCATATTAATGGTGATGTGAAAGCTCCAGTTGGGAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR GCA 72 bp CTGGTGTGTCTTGAGGTGGACTCTTTGAGTCTTTCCTaGTTAGAATTTGTTGAGCTTCTTGGATTCACTTTA +
Preference number: 3 (lower is better)
Translates to: LVCLEVDSLSLS*LEFVELLGFTL
Trigger: TAAAGTGAATCCAAGAAGCTCAACAAATTCTAAGCAGGAAAGACTCAAAGAGTCCACCTCAAGACACACCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATCTCACAAAGCTGCCTTaGTGTACCAAAGTTGTTTTC +
Preference number: 3 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNLTKLP*CTKVVF
Trigger: GAAAACAACTTTGGTACACAAAGGCAGCTTTGTGAG...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGAACACAAATGACATCTaGTTCTCCCTACTGCTAGTG +
Preference number: 3 (lower is better)
Translates to: IHMDTKMATRDTKDDKRENTNDI*FSLLLV
Trigger: CACTAGCAGTAGGGAGAACAAGATGTCATTTGTGTT...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCATATGGAGGGATGCTTaGGGGAAAACACTTCTAAAA +
Preference number: 3 (lower is better)
Translates to: KAEILDQDCVQLVDQFGAIWRDA*GKTLLK
Trigger: TTTTAGAAGTGTTTTCCCCAAAGCATCCCTCCATAT...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATATGTTTACTGCAGCCTaGTTTGCAATAGCCAAGATT +
Preference number: 3 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNMFTAA*FAIAKI
Trigger: AATCTTGGCTATTGCAAACAAGGCTGCAGTAAACAT...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATACAGAAAACCAAATATaGCACAGTCTCATAAGTGGG +
Preference number: 3 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNTENQI*HSLISG
Trigger: CCCACTTATGAGACTGTGCAATATTTGGTTTTCTGT...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCAAAGAGTGTTGTGTATaGCCAAATGCTTTTTCAGTG +
Preference number: 3 (lower is better)
Translates to: KAEILDQDCVQLVDQFGAKECCV*PNAFSV
Trigger: CACTGAAAAAGCATTTGGCAATACACAACACTCTTT...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR TCA 72 bp TCCTATTATGTGTATGTTGGTATGTTTGATGGTGTCTaGCGGGTGTCTGAAGCACTGATCATTTTTCTTTGC +
Preference number: 3 (lower is better)
Translates to: SYYVYVGMFDGV*RVSEALIIFLC
Trigger: GCAAAGAAAAATGATCAGTGCTTCAGACACCCGTCAGACACCATCAAACATACCAACATACACATAATAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR TCA 72 bp TTAAATTTACTGAGACTTGTTTTATGGCCTAGCATGTaGTCTACCCCAGAGAATGTTCCATGTGCACTTGAG +
Preference number: 3 (lower is better)
Translates to: LNLLRLVLWPSM*STPENVPCALE
Trigger: CTCAAGTGCACATGGAACATTCTCTGGGGTAGATCACATGCTAGGCCATAAAACAAGTCTCAGTAAATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 72 bp CAGTCTCATAAGTGGGAGCCAAACATTAGATACACATaGACACAAAAATGGCAACAAGAGACACTAAAGATG +
Preference number: 3 (lower is better)
Translates to: QSHKWEPNIRYT*TQKWQQETLKM
Trigger: CATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTATCTAATGTTTGGCTCCCACTTATGAGACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATCTCTTATATATGCCATaGAGTCAGGTTTCTCAGAAA +
Preference number: 3 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNLLYMP*SQVSQK
Trigger: TTTCTGAGAAACCTGACTCAATGGCATATATAAGAG...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR-3UTR CAA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATATTACAGGCCTTTTCTaGAATAAATGGATTGCTGCA +
Preference number: 3 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNITGLF*NKWIAA
Trigger: TGCAGCAATCCATTTATTCAAGAAAAGGCCTGTAAT...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR TCA 72 bp CTTCCAACAACATGGATGGAACTGAAGATCGTTATGTaGAGTGAAATTAGCCAGGTAAGTTTTGAAGTAAGC +
Preference number: 3 (lower is better)
Translates to: LPTTWMELKIVM*SEISQVSFEVS
Trigger: GCTTACTTCAAAACTTACCTGGCTAATTTCACTTCACATAACGATCTTCAGTTCCATCCATGTTGTTGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR GCA 72 bp ACCAGAAAGACACATGCACCTATATGTTTATCACAGTaGTATTCACAAGAGCAAAGACATGGAATCAACCTA +
Preference number: 3 (lower is better)
Translates to: TRKTHAPICLSQ*YSQEQRHGINL
Trigger: TAGGTTGATTCCATGTCTTTGCTCTTGTGAATAGCACTGTGATAAACATATAGGTGCATGTGTCTTTCTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR GCA 72 bp TCTTGGCCTCCTTGTCGAAAATCAGTTCACTATAGATaGAAGGGTTTATTTTTGACTCTCAGTTCTATTCTC +
Preference number: 3 (lower is better)
Translates to: SWPPCRKSVHYR*KGLFLTLSSIL
Trigger: GAGAATAGAACTGAGAGTCAAAAATAAACCCTTGCATCTATAGTGAACTGATTTTCGACAAGGAGGCCAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 72 bp AGGAACAGAAAACCAAATATTGCACAGTCTCATAAGTaGGAGCCAAACATTAGATACACATGGACACAAAAA +
Preference number: 3 (lower is better)
Translates to: RNRKPNIAQSHK*EPNIRYTWTQK
Trigger: TTTTTGTGTCCATGTGTATCTAATGTTTGGCTCCCACTTATGAGACTGTGCAATATTTGGTTTTCTGTTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 72 bp CACTGCTGGCAGGAATGTAAATTGGTTGAACCACTGTaGAAAGAAGTTTGGAGATTTCTCAAAGAATTTAAA +
Preference number: 3 (lower is better)
Translates to: HCWQECKLVEPL*KEVWRFLKEFK
Trigger: TTTAAATTCTTTGAGAAATCTCCAAACTTCTTTCCACAGTGGTTCAACCAATTTACATTCCTGCCAGCAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CCA 72 bp GTTAAAAAGACTATTCTTTCCCTCATCAAATTGTCTTaGCCTCCTTGTCGAAAATCAGTTCACTATAGATGC +
Preference number: 3 (lower is better)
Translates to: VKKTILSLIKLS*PPCRKSVHYRC
Trigger: GCATCTATAGTGAACTGATTTTCGACAAGGAGGCCAAGACAATTTGATGAGGGAAAGAATAGTCTTTTTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR TCA 72 bp ATATTTAAAATTATTTACTTAGTGGCTGGTGTGTCTTaGGGTGGACTCTTTGAGTCTTTCCTGCTTAGAATT +
Preference number: 3 (lower is better)
Translates to: IFKIIYLVAGVS*GGLFESFLLRI
Trigger: AATTCTAAGCAGGAAAGACTCAAAGAGTCCACCTCAAGACACACCAGCCACTAAGTAAATAATTTTAAATAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR GCA 72 bp CCAAAAGAAAACAATTCATTCTACCAGAAAGACACATaGACCTATATGTTTATCACAGTGCTATTCACAAGA +
Preference number: 3 (lower is better)
Translates to: PKENNSFYQKDT*TYMFITVLFTR
Trigger: TCTTGTGAATAGCACTGTGATAAACATATAGGTGCATGTGTCTTTCTGGTAGAATGAATTGTTTTCTTTTGG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR GCA 72 bp CAGTTATTTTTGAAGGTACAACAAATTATTGCTGACTaGAGTCACCCTGTTGTGCTATCAAATACTAGATAT +
Preference number: 3 (lower is better)
Translates to: QLFLKVQQIIAD*SHPVVLSNTRY
Trigger: ATATCTAGTATTTGATAGCACAACAGGGTGACTGCAGTCAGCAATAATTTGTTGTACCTTCAAAAATAACTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp ATCTCACTCCCATCTCAGAATTTCCCAAACACCAACCCATCGGCTGCGTTGGGCGAGGTCCCAGTGCCCTaGCGTTCCCGGGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: ISLPSQNFPNTNPSAALGEVPVP*RSRGEG
Trigger: CCCCTCTCCCCGGGAACGGCAGGGCACTGGGACCTC...GCCCAACGCAGCCGATGGGTTGGTGTTTGGGAAATTCTGAGATGGGAGTGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp ATCTCACTCCCATCTCAGAATTTCCCAAACACCAACCCATCGGCTGCGTTGGGCCATAGTCCAGAGCAGTaGGGCTGCAGCCGGGCATGG +
Preference number: 4 (lower is better)
Translates to: ISLPSQNFPNTNPSAALGHSPEQ*GCSRAW
Trigger: CCATGCCCGGCTGCAGCCCCACTGCTCTGGACTATG...GCCCAACGCAGCCGATGGGTTGGTGTTTGGGAAATTCTGAGATGGGAGTGAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CAA 72 bp ATGCCCATGCTTTCCCTGTCACCCGCCCACCTAGACTaGCCAGGGACCCAGAACCCTACACGTTCTAACTGG +
Preference number: 4 (lower is better)
Translates to: MPMLSLSPAHLD*PGTQNPTRSNW
Trigger: CCAGTTAGAACGTGTAGGGTTCTGGGTCCCTGGCAAGTCTAGGTGGGCGGGTGACAGGGAAAGCATGGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp GTGGAAGCAGCCACAGAAGGCAGGCCAGCCATACAAAGGAAAGATGTCCAAAGCGTTCCAATCCCCTTCTaGGCCCTACGGTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VEAATEGRPAIQRKDVQSVPIPF*ALRWLL
Trigger: GAGCAGCCACCGTAGGGCTCAGAAGGGGATTGGAAC...GCTTTGGACATCTTTCCTTTGTATGGCTGGCCTGCCTTCTGTGGCTGCTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp ATCTCACTCCCATCTCAGAATTTCCCAAACACCAACCCATCGGCTGCGTTGGGCCTCCCAGCATCAGGTTaGATCTGGGGTTGTCTCGCC +
Preference number: 4 (lower is better)
Translates to: ISLPSQNFPNTNPSAALGLPASG*IWGCLA
Trigger: GGCGAGACAACCCCAGATTCAACCTGATGCTGGGAG...GCCCAACGCAGCCGATGGGTTGGTGTTTGGGAAATTCTGAGATGGGAGTGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp ATCTCACTCCCATCTCAGAATTTCCCAAACACCAACCCATCGGCTGCGTTGGGCAGCTACTCAGGAGGCTaGGACGGGAGGACTGCTCAA +
Preference number: 4 (lower is better)
Translates to: ISLPSQNFPNTNPSAALGSYSGG*DGRTAQ
Trigger: TTGAGCAGTCCTCCCGTCTCAGCCTCCTGAGTAGCT...GCCCAACGCAGCCGATGGGTTGGTGTTTGGGAAATTCTGAGATGGGAGTGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAAATGGTCTCCATCTCCTaGCCTCGTGATCGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQMVSIS*PRDRPP
Trigger: AGGCGGGCGATCACGAGGTCAGGAGATGGAGACCAT...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp GTGGAAGCAGCCACAGAAGGCAGGCCAGCCATACAAAGGAAAGATGTCCAAAGCCCTCGGCGTAGACGCTaGTGTTCTCATCGCGTACCA +
Preference number: 4 (lower is better)
Translates to: VEAATEGRPAIQRKDVQSPRRRR*CSHRVP
Trigger: TGGTACGCGATGAGAACAGCAGCGTCTACGCCGAGG...GCTTTGGACATCTTTCCTTTGTATGGCTGGCCTGCCTTCTGTGGCTGCTTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAACACTGTCACCCAGGCTaGATGGAGTGCAGTGGCGTG +
Preference number: 4 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQHCHPG*MECSGV
Trigger: CACGCCACTGCACTCCATCCAGCCTGGGTGACAGTG...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CAA 72 bp AAAATTCGAGCCGGGAGTCTGTTGCACAGGCTGGTCTaGAACTTCCGGCCTCTAGTGATCCTCTCGCCTTGC +
Preference number: 4 (lower is better)
Translates to: KIRAGSLLHRLV*NFRPLVILSPC
Trigger: GCAAGGCGAGAGGATCACTAGAGGCCGGAAGTTCAAGACCAGCCTGTGCAACAGACTCCCGGCTCGAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp GTGGAAGCAGCCACAGAAGGCAGGCCAGCCATACAAAGGAAAGATGTCCAAAGCCAAGGCAGCAGGGAGTaGCCTCTGTCACAGCTTGAT +
Preference number: 4 (lower is better)
Translates to: VEAATEGRPAIQRKDVQSQGSRE*PLSQLD
Trigger: ATCAAGCTGTGACAGAGGGCACTCCCTGCTGCCTTG...GCTTTGGACATCTTTCCTTTGTATGGCTGGCCTGCCTTCTGTGGCTGCTTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCGAGGGAAACCACCTTTaGCGAGAGGCCAGTGCACAG +
Preference number: 4 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSEGNHL*REASAQ
Trigger: CTGTGCACTGGCCTCTCGGCAAAGGTGGTTTCCCTC...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp ATCTCACTCCCATCTCAGAATTTCCCAAACACCAACCCATCGGCTGCGTTGGGCCTGTTTGGAGTGGAGTaGCTACACAGGGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: ISLPSQNFPNTNPSAALGLFGVE*LHRASG
Trigger: GCCAGAAGCCCTGTGTAGGCACTCCACTCCAAACAG...GCCCAACGCAGCCGATGGGTTGGTGTTTGGGAAATTCTGAGATGGGAGTGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCCCACGAAGGTGTACATaGCGAAGCGCCGCGCGCCCG +
Preference number: 4 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFPRRCT*RSAARP
Trigger: CGGGCGCGCGGCGCTTCGCCATGTACACCTTCGTGG...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp GTGGAAGCAGCCACAGAAGGCAGGCCAGCCATACAAAGGAAAGATGTCCAAAGCCTCCACATCTGGGGGTaGGAAGACACTGGAAATGGC +
Preference number: 4 (lower is better)
Translates to: VEAATEGRPAIQRKDVQSLHIWG*EDTGNG
Trigger: GCCATTTCCAGTGTCTTCCCACCCCCAGATGTGGAG...GCTTTGGACATCTTTCCTTTGTATGGCTGGCCTGCCTTCTGTGGCTGCTTCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp ATCTCACTCCCATCTCAGAATTTCCCAAACACCAACCCATCGGCTGCGTTGGGCCTTGATGAAGGCAGCTaGCTGGGTCTGAGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: ISLPSQNFPNTNPSAALGLDEGS*LGLRLL
Trigger: GAGCAACCTCAGACCCAGCCAGCTGCCTTCATCAAG...GCCCAACGCAGCCGATGGGTTGGTGTTTGGGAAATTCTGAGATGGGAGTGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp ATCTCACTCCCATCTCAGAATTTCCCAAACACCAACCCATCGGCTGCGTTGGGCAAAGCAACCTTTGTCTaGGGCAGGGCCACTTGGGGA +
Preference number: 4 (lower is better)
Translates to: ISLPSQNFPNTNPSAALGKATFV*GRATWG
Trigger: TCCCCAAGTGGCCCTGCCCCAGACAAAGGTTGCTTT...GCCCAACGCAGCCGATGGGTTGGTGTTTGGGAAATTCTGAGATGGGAGTGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCAGGCTGTTGTGGAGCTaGGGAAAGGGGGAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSRLLWS*GKGEWE
Trigger: TTCCCACTCCCCCTTTCCCCAGCTCCACAACAGCCT...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp ATCTCACTCCCATCTCAGAATTTCCCAAACACCAACCCATCGGCTGCGTTGGGCGCTCCTCATCGACCATaGAGTCAAAGCCGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: ISLPSQNFPNTNPSAALGAPHRP*SQSRRA
Trigger: AGCTCTTCGGCTTTGACTTCATGGTCGATGAGGAGC...GCCCAACGCAGCCGATGGGTTGGTGTTTGGGAAATTCTGAGATGGGAGTGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp TTTGCCGAGAGGCCAGTGCACAGCACAAAACTAAGGACTGTTGGTGCATGCTTGCTCATCAAAAGCCCTTaGGGTAGTCCCTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: FAERPVHSTKLRTVGACLLIKSP*GSPWVR
Trigger: CCTGACCCAGGGACTACCTCAAGGGCTTTTGATGAG...CAAGCATGCACCAACAGTCCTTAGTTTTGTGCTGTGCACTGGCCTCTCGGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp GTGGAAGCAGCCACAGAAGGCAGGCCAGCCATACAAAGGAAAGATGTCCAAAGCTGTCCCTCTAGCTACTaGAGAAAGTGCTTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: VEAATEGRPAIQRKDVQSCPSSY*RKCLGA
Trigger: TGCCCCCAAGCACTTTCTGCAGTAGCTAGAGGGACA...GCTTTGGACATCTTTCCTTTGTATGGCTGGCCTGCCTTCTGTGGCTGCTTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAAGAGCCCTACGGTGGCTaGTCTGCTGCTGGATGTCAG +
Preference number: 4 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCEEPYGG*SAAGCQ
Trigger: CTGACATCCAGCAGCAGAGCAGCCACCGTAGGGCTC...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAACTGAGGCAGGAGGATTaGCTGAGGACGGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQLRQED*LRTGVQ
Trigger: TTGAACTCCCGTCCTCAGGCAATCCTCCTGCCTCAG...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCCGCAGCCTCTTCCAGTaGCCGGTGGCGAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: KAEILDQDCVQLVDQFGARSLFQ*PVARSS
Trigger: GCTGCTCCTCGCCACCGGCCACTGGAAGAGGCTGCG...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp ATCTCACTCCCATCTCAGAATTTCCCAAACACCAACCCATCGGCTGCGTTGGGCGAGAGCCAATTCACCTaGGACCTTCTCCACTTCACC +
Preference number: 4 (lower is better)
Translates to: ISLPSQNFPNTNPSAALGESQFT*DLLHFT
Trigger: GGTGAAGTGGAGAAGGTCCCAGGTGAATTGGCTCTC...GCCCAACGCAGCCGATGGGTTGGTGTTTGGGAAATTCTGAGATGGGAGTGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCACAGGGCTTCTGGCATaGAAACCTCCTCTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSTGLLA*KPPLCQ
Trigger: CTGGCACAGAGGAGGTTTCCATGCCAGAAGCCCTGT...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CAA 72 bp GTGGGACCAGTCTTTAAGAGAAGTCTTCCAAAGGCTTaGGGCCTGTCCACTCTCAGGGTCCTAAGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: VGPVFKRSLPKA*GLSTLRVLSRC
Trigger: GCACCTACTTAGGACCCTGAGAGTGGACAGGCCCAAAGCCTTTGGAAGACTTCTCTTAAAGACTGGTCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCACCCTGACAGGTGACTaGCCAAACACCATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSTLTGD*PNTIRK
Trigger: CTTCCTGATGGTGTTTGGTCAGTCACCTGTCAGGGT...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp ATCTCACTCCCATCTCAGAATTTCCCAAACACCAACCCATCGGCTGCGTTGGGCACAAACCCTGACAGGTaGCTGACCAAACACCATCAG +
Preference number: 4 (lower is better)
Translates to: ISLPSQNFPNTNPSAALGTNPDR*LTKHHQ
Trigger: CTGATGGTGTTTGGTCAGTCACCTGTCAGGGTTTGT...GCCCAACGCAGCCGATGGGTTGGTGTTTGGGAAATTCTGAGATGGGAGTGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp ATCTCACTCCCATCTCAGAATTTCCCAAACACCAACCCATCGGCTGCGTTGGGCTTTCCAAATAAACCATaGCTCCTCCCCCAGCAACGG +
Preference number: 4 (lower is better)
Translates to: ISLPSQNFPNTNPSAALGFPNKP*LLPQQR
Trigger: CCGTTGCTGGGGGAGGAGTCATGGTTTATTTGGAAA...GCCCAACGCAGCCGATGGGTTGGTGTTTGGGAAATTCTGAGATGGGAGTGAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCGAGGGGAAGGAGCTCTaGTCACAAAGCTGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSEGKEL*SQSCLC
Trigger: ACAAAGGCAGCTTTGTGAGCAGAGCTCCTTCCCCTC...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATGACCAGAGGTCCCAGTaGCCTGCCGTTCCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNDQRSQ*PAVPGE
Trigger: CTCCCCGGGAACGGCAGGGCACTGGGACCTCTGGTC...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp TTTGCCGAGAGGCCAGTGCACAGCACAAAACTAAGGACTGTTGGTGCATGCTTGAGGGTCCTAAGTAGGTaGCTGCCTGGATCCATGTCT +
Preference number: 4 (lower is better)
Translates to: FAERPVHSTKLRTVGACLRVLSR*LPGSMS
Trigger: AGACATGGATCCAGGCAGGCACCTACTTAGGACCCT...CAAGCATGCACCAACAGTCCTTAGTTTTGTGCTGTGCACTGGCCTCTCGGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp ATCTCACTCCCATCTCAGAATTTCCCAAACACCAACCCATCGGCTGCGTTGGGCTGGCCTCATTTGATCTaGCCACCTTGGCCTCCTAAA +
Preference number: 4 (lower is better)
Translates to: ISLPSQNFPNTNPSAALGWPHLI*PPWPPK
Trigger: TTTAGGAGGCCAAGGTGGGCAGATCAAATGAGGCCA...GCCCAACGCAGCCGATGGGTTGGTGTTTGGGAAATTCTGAGATGGGAGTGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCGGGGTGGGAAGACACTaGAAATGGCTATGTCCACGA +
Preference number: 4 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSGVGRH*KWLCPR
Trigger: TCGTGGACATAGCCATTTCCAGTGTCTTCCCACCCC...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAACATTTCACCATTCCCTaGAGCAGGACCCCGTGCTTT +
Preference number: 4 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQHFTIP*SRTPCF
Trigger: AAAGCACGGGGTCCTGCTCCAGGGAATGGTGAAATG...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCGAACGTAGCACGTTCTaGTGGGGAGGGCAGTTTTCA +
Preference number: 4 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSERSTF*WGGQFS
Trigger: TGAAAACTGCCCTCCCCACCAGAACGTGCTACGTTC...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp ATCTCACTCCCATCTCAGAATTTCCCAAACACCAACCCATCGGCTGCGTTGGGCGAAACCTGTTTGGAGTaGAGTGCCTACACAGGGCTT +
Preference number: 4 (lower is better)
Translates to: ISLPSQNFPNTNPSAALGETCLE*SAYTGL
Trigger: AAGCCCTGTGTAGGCACTCCACTCCAAACAGGTTTC...GCCCAACGCAGCCGATGGGTTGGTGTTTGGGAAATTCTGAGATGGGAGTGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCATCTGGGAAGCCCCCTaGGCAGCCCTCTCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFIWEAP*AALSLG
Trigger: TCCCAAAGAGAGGGCTGCTCAGGGGGCTTCCCAGAT...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp ATCTCACTCCCATCTCAGAATTTCCCAAACACCAACCCATCGGCTGCGTTGGGCTTCAATGGGTTGCTGTaGTTTCCAGGACACTCTAGG +
Preference number: 4 (lower is better)
Translates to: ISLPSQNFPNTNPSAALGFNGLL*FPGHSR
Trigger: CCTAGAGTGTCCTGGAAATCACAGCAACCCATTGAA...GCCCAACGCAGCCGATGGGTTGGTGTTTGGGAAATTCTGAGATGGGAGTGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAACAAAAGTATGAAGCCTaGCTGGGAGCCAGGCATAAC +
Preference number: 4 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQQKYEA*LGARHN
Trigger: GTTATGCCTGGCTCCCAGTCAGGCTTCATACTTTTG...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCATTCAGGGAACCATGTaGAGGACTCAGCCAGTTCAG +
Preference number: 4 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSIQGTM*RTQPVQ
Trigger: CTGAACTGGCTGAGTCCTGCACATGGTTCCCTGAAT...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCGACAGAGAGCAGTTGTaGGATCTCTGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSDREQL*DLCSLQ
Trigger: TTGCAGTGAGCAGAGATCGCACAACTGCTCTCTGTC...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCATGATCTTGGCTCACTaGAACCTCTACCTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSMILAH*NLYLLP
Trigger: AGGCAGGAGGTAGAGGTTGCAGTGAGCCAAGATCAT...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCTTGCTGAGGATGGAGTaGAGTGGCATGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSLLRME*SGMILA
Trigger: AGCCAAGATCATGCCACTGCACTCCATCCTCAGCAA...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAAGTGTTACCGAAGGGATaGGTGGGGAACACACAGGCA +
Preference number: 4 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCEVLPKG*VGNTQA
Trigger: TGCCTGTGTGTTCCCCACCCATCCCTTCGGTAACAC...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp TTTGCCGAGAGGCCAGTGCACAGCACAAAACTAAGGACTGTTGGTGCATGCTTGGTACAGAGCTTAGTGTaGCAGAGTGTTACCGAAGGG +
Preference number: 4 (lower is better)
Translates to: FAERPVHSTKLRTVGACLVQSLV*QSVTEG
Trigger: CCCTTCGGTAACACTCTGCCACACTAAGCTCTGTAC...CAAGCATGCACCAACAGTCCTTAGTTTTGTGCTGTGCACTGGCCTCTCGGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp ATCTCACTCCCATCTCAGAATTTCCCAAACACCAACCCATCGGCTGCGTTGGGCGAGGGCAGTTTTCAATaGGTTGCTGTGATTTCCAGG +
Preference number: 4 (lower is better)
Translates to: ISLPSQNFPNTNPSAALGEGSFQ*VAVISR
Trigger: CCTGGAAATCACAGCAACCCATTGAAAACTGCCCTC...GCCCAACGCAGCCGATGGGTTGGTGTTTGGGAAATTCTGAGATGGGAGTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAAAGTATGAAGCCTGACTaGGAGCCAGGCATAACCTTC +
Preference number: 4 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQSMKPD*EPGITF
Trigger: GAAGGTTATGCCTGGCTCCCAGTCAGGCTTCATACT...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CAA 72 bp CCACTGGGAATGTGTCATAGTGTATGTGAAACCTGTTaGGAGTGGAGTGCCTACACAGGGCTTCTGGCATGG +
Preference number: 4 (lower is better)
Translates to: PLGMCHSVCETC*EWSAYTGLLAW
Trigger: CCATGCCAGAAGCCCTGTGTAGGCACTCCACTCCAAACAGGTTTCACATACACTATGACACATTCCCAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCAACATGATATGGTTCTaGAGCAGTCCGAAGCACACC +
Preference number: 4 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSNMIWF*SSPKHT
Trigger: GGTGTGCTTCGGACTGCTTCAGAACCATATCATGTT...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAAAACCCGCACAAACCCTaGCAGGTGACTGACCAAACA +
Preference number: 4 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCENPHKP*QVTDQT
Trigger: TGTTTGGTCAGTCACCTGTCAGGGTTTGTGCGGGTT...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp ATCTCACTCCCATCTCAGAATTTCCCAAACACCAACCCATCGGCTGCGTTGGGCTTGAAACCAGAAGTTTaGGGCTGCAGTGAGCTATCA +
Preference number: 4 (lower is better)
Translates to: ISLPSQNFPNTNPSAALGLKPEV*GCSELS
Trigger: TGATAGCTCACTGCAGCCTCAAACTTCTGGTTTCAA...GCCCAACGCAGCCGATGGGTTGGTGTTTGGGAAATTCTGAGATGGGAGTGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCGAGCTTCTGAGCACATaGAGGGGCACCGTTGACCTC +
Preference number: 4 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFELLST*RGTVDL
Trigger: GAGGTCAACGGTGCCCCTGCATGTGCTCAGAAGCTC...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCTCTACAGCACCCGCATaGTACACGGGACCTACTCCG +
Preference number: 4 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFSTAPA*YTGPTP
Trigger: CGGAGTAGGTCCCGTGTAGCATGCGGGTGCTGTAGA...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCGGATGTGTATTTTGCTaGTGTTGGGTGGAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSGCVFC*CWVECL
Trigger: AAGGCACTCCACCCAACAGCAGCAAAATACACATCC...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAAGAAGGATGTGTATTTTaGTGCTGTTGGGTGGAGTGC +
Preference number: 4 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQEGCVF*CCWVEC
Trigger: GCACTCCACCCAACAGCAGCAAAATACACATCCTTC...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp GTGGAAGCAGCCACAGAAGGCAGGCCAGCCATACAAAGGAAAGATGTCCAAAGCGTGTCAAGGACATCATaGAAGGGAAAGGAACAGTTC +
Preference number: 4 (lower is better)
Translates to: VEAATEGRPAIQRKDVQSVSRTS*KGKEQF
Trigger: GAACTGTTCCTTTCCCTTCCATGATGTCCTTGACAC...GCTTTGGACATCTTTCCTTTGTATGGCTGGCCTGCCTTCTGTGGCTGCTTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCATCTGGCTTACAATCTaGTCCTGGGCTTTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSIWLTI*SWAFPC
Trigger: ACAGGGAAAAGCCCAGGACCAGATTGTAAGCCAGAT...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp TTTGCCGAGAGGCCAGTGCACAGCACAAAACTAAGGACTGTTGGTGCATGCTTGTTACTGATTGGTGGCTaGATTCCATTCTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: FAERPVHSTKLRTVGACLLLIGG*IPFCAG
Trigger: TCCAGCACAGAATGGAATTCAGCCACCAATCAGTAA...CAAGCATGCACCAACAGTCCTTAGTTTTGTGCTGTGCACTGGCCTCTCGGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAATCTTTCATCTGTCCTTaGGTTACTGATTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQSFICP*VTDWWL
Trigger: CAGCCACCAATCAGTAACTCAAGGACAGATGAAAGA...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAACCAGAGGTATATTTATaGAGTGGAAGCAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQPEVYL*SGSSHR
Trigger: TCTGTGGCTGCTTCCACTTCATAAATATACCTCTGG...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATTGCCTTCTGCCATGCTaGGGCAGCAAGAAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNCLLPC*GSKKAL
Trigger: GAGGGCCTTCTTGCTGCCTCAGCATGGCAGAAGGCA...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAATGTCTGACGGGTGTCTaGAGCACTGATCATTTTTCT +
Preference number: 4 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQCLTGV*STDHFS
Trigger: AGAAAAATGATCAGTGCTTCAGACACCCGTCAGACA...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp TTTGCCGAGAGGCCAGTGCACAGCACAAAACTAAGGACTGTTGGTGCATGCTTGTTATGGCCTAGCATGTaGTCTACCCCAGAGAATGTT +
Preference number: 4 (lower is better)
Translates to: FAERPVHSTKLRTVGACLLWPSM*STPENV
Trigger: AACATTCTCTGGGGTAGATCACATGCTAGGCCATAA...CAAGCATGCACCAACAGTCCTTAGTTTTGTGCTGTGCACTGGCCTCTCGGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCCTGAATTCCATTCTGTaGTGGAGCAACTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSLNSIL*WSNWSL
Trigger: AAGACTCCAGTTGCTCCAGCACAGAATGGAATTCAG...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGCCTCTCTTTGGGAGCTaGCTCCTCTGCTCACGTGCC +
Preference number: 4 (lower is better)
Translates to: IHMDTKMATRDTKDDKREPLFGS*LLCSRA
Trigger: GGCACGTGAGCAGAGGAGGCAGCTCCCAAAGAGAGG...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGGGATCCATGTCTGCTTaGACCCTGCACCCTGCACCC +
Preference number: 4 (lower is better)
Translates to: IHMDTKMATRDTKDDKREGSMSA*TLHPAP
Trigger: GGGTGCAGGGTGCAGGGTGCAAGCAGACATGGATCC...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGGAGCAGCCCTCTCTTTaGGAGCTGCCTCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: IHMDTKMATRDTKDDKREEQPSL*ELPPLL
Trigger: GAGCAGAGGAGGCAGCTCCCAAAGAGAGGGCTGCTC...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCTGTTGGCTTATGTATTaGGTAACATCCTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSCWLMY*VTSWGQ
Trigger: CTGACCCCAGGATGTTACCCAATACATAAGCCAACA...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCGTCTTCCAAAGGCTTTaGGCCTGTCCACTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFVFQRL*ACPLSG
Trigger: CCCTGAGAGTGGACAGGCCCAAAGCCTTTGGAAGAC...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCGCTACTGACAGGAAGTaGGACCAGTCTTTAAGAGAA +
Preference number: 4 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSATDRK*DQSLRE
Trigger: TTCTCTTAAAGACTGGTCCCACTTCCTGTCAGTAGC...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAAATTAGCCAAGTATGGTaGCAGGCACCTATAGTTCCA +
Preference number: 4 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQISQVW*QAPIVP
Trigger: TGGAACTATAGGTGCCTGCCACCATACTTGGCTAAT...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAAGTATTTTGCTGCTGTTaGGTGGAGTGCCTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQVFCCC*VECLVD
Trigger: ATCTACAAGGCACTCCACCCAACAGCAGCAAAATAC...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAAGTTACAAAGGTATATTaGGTGATGCTGAGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQVTKVY*VMLRSG
Trigger: CCCAGACCTCAGCATCACCCAATATACCTTTGTAAC...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAAACCTCCAATATGCTCTaGCGTCCAATCCATAGTCCA +
Preference number: 4 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCETSNML*RPIHSP
Trigger: TGGACTATGGATTGGACGTCAGAGCATATTGGAGGT...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCGGACCTCCCCTTGCTTaGTGTAGCCTCCACTGTGAA +
Preference number: 4 (lower is better)
Translates to: KAEILDQDCVQLVDQFGAGPPLA*CSLHCE
Trigger: TTCACAGTGGAGGCTACATCAAGCAAGGGGAGGTCC...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAATGGGACTTTGGCAGCTaGAATAGTCTCAGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCEWDFGS*NSLSAS
Trigger: TGAAGCACTGAGACTATTTCAGCTGCCAAAGTCCCA...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAACAACATGGATGGAACTaGAGATCGTTATGTGAAGTG +
Preference number: 4 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQQHGWN*RSLCEV
Trigger: CACTTCACATAACGATCTTCAGTTCCATCCATGTTG...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAACTCATCTTTGCGAGTTaGCTTTCTTTCCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCELIFAS*LSFPCC
Trigger: ACAGCAGGGGAAAGAAAGGCAACTCGCAAAGATGAG...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAAGGGACTACAGGCACCTaGCACCGCGCCCGGCTAATT +
Preference number: 4 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKGTTGT*HRARLI
Trigger: AATTAGCCGGGCGCGGTGGCAGGTGCCTGTAGTCCC...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCGCTCACTGCAAGCTCTaGCTCCTAGGTTCACGCCAT +
Preference number: 4 (lower is better)
Translates to: KAEILDQDCVQLVDQFGAAHCKL*LLGSRH
Trigger: ATGGCGTGAACCTAGGAGGCAGAGCTTGCAGTGAGC...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp GTGGAAGCAGCCACAGAAGGCAGGCCAGCCATACAAAGGAAAGATGTCCAAAGCTACTGCAGCCTTGTTTaGAATAGCCAAGATTTGGAA +
Preference number: 4 (lower is better)
Translates to: VEAATEGRPAIQRKDVQSYCSLV*NSQDLE
Trigger: TTCCAAATCTTGGCTATTGCAAACAAGGCTGCAGTA...GCTTTGGACATCTTTCCTTTGTATGGCTGGCCTGCCTTCTGTGGCTGCTTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAACAAATTATTGCTGACTaGAGTCACCCTGTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQQIIAD*SHPVVL
Trigger: TAGCACAACAGGGTGACTGCAGTCAGCAATAATTTG...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCAAATTACTGCACATCTaGCCTGCTTTTATACGGCCT +
Preference number: 4 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSKLLHI*PAFIRP
Trigger: AGGCCGTATAAAAGCAGGCCAGATGTGCAGTAATTT...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCCCTACACAGGGCTTCTaGCATGGAAACCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFPTQGF*HGNLLC
Trigger: ACAGAGGAGGTTTCCATGCCAGAAGCCCTGTGTAGG...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp ATCTCACTCCCATCTCAGAATTTCCCAAACACCAACCCATCGGCTGCGTTGGGCATGTTATGCCAGGAGTaGGTTAGTTATCACAGGAAT +
Preference number: 4 (lower is better)
Translates to: ISLPSQNFPNTNPSAALGMLCQE*VSYHRN
Trigger: ATTCCTGTGATAACTAACCCACTCCTGGCATAACAT...GCCCAACGCAGCCGATGGGTTGGTGTTTGGGAAATTCTGAGATGGGAGTGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAATGGCCGAGGCTGTTGTaGAGCTGGGGAAAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKWPRLL*SWGKGE
Trigger: CTCCCCCTTTCCCCAGCTCCACAACAGCCTCGGCCA...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp ATCTCACTCCCATCTCAGAATTTCCCAAACACCAACCCATCGGCTGCGTTGGGCAAGTGGGAAAGGTTTTaGCCACTATTTCTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: ISLPSQNFPNTNPSAALGKWERF*PLFLPV
Trigger: TACTGGAAGAAATAGTGGCCAAAACCTTTCCCACTT...GCCCAACGCAGCCGATGGGTTGGTGTTTGGGAAATTCTGAGATGGGAGTGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCGTGAGCCACCGCGACTaGCCTCTTCCCAACTTTATG +
Preference number: 4 (lower is better)
Translates to: KAEILDQDCVQLVDQFGAVSHRD*PLPNFM
Trigger: CATAAAGTTGGGAAGAGGCCAGTCGCGGTGGCTCAC...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAATCTCTCATGCTTATTTaGTGCTTACAGGTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCESLMLI*CLQVQG
Trigger: GCCCTGAACCTGTAAGCATCAAATAAGCATGAGAGA...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAAAGTGATGTGGCCTCCTaGAAAGCCTATAAAGTATTA +
Preference number: 4 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQSDVAS*KAYKVL
Trigger: TAATACTTTATAGGCTTTTCAGGAGGCCACATCACT...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCCCATGCAATCTCTGCTaGGTCCACTGGGAATGTGTC +
Preference number: 4 (lower is better)
Translates to: KAEILDQDCVQLVDQFGAPCNLC*VHWECV
Trigger: GACACATTCCCAGTGGACTCAGCAGAGATTGCATGG...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGAGGAGGTGTAGCTACTaGCAGGAAGTGGGACCAGTC +
Preference number: 4 (lower is better)
Translates to: IHMDTKMATRDTKDDKRERRCSY*QEVGPV
Trigger: GACTGGTCCCACTTCCTGTCAGTAGCTACACCTCCT...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp GTGGAAGCAGCCACAGAAGGCAGGCCAGCCATACAAAGGAAAGATGTCCAAAGCCTGCTTAGAATTTGTTaGGCTTCTTGGATTCACTTT +
Preference number: 4 (lower is better)
Translates to: VEAATEGRPAIQRKDVQSLLRIC*ASWIHF
Trigger: AAAGTGAATCCAAGAAGCTCAACAAATTCTAAGCAG...GCTTTGGACATCTTTCCTTTGTATGGCTGGCCTGCCTTCTGTGGCTGCTTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATCACCAACCCATCGGCTaGGTTGGGCCTCAAGGATTA +
Preference number: 4 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNHQPIG*VGPQGL
Trigger: TAATCCTTGAGGCCCAACGCAGCCGATGGGTTGGTG...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp GTGGAAGCAGCCACAGAAGGCAGGCCAGCCATACAAAGGAAAGATGTCCAAAGCAGAATGCTTATACACTaGTGGCAGGAATGTAAATTG +
Preference number: 4 (lower is better)
Translates to: VEAATEGRPAIQRKDVQSRMLIH*WQECKL
Trigger: CAATTTACATTCCTGCCAGCAGTGTATAAGCATTCT...GCTTTGGACATCTTTCCTTTGTATGGCTGGCCTGCCTTCTGTGGCTGCTTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAATGGTATCTTGTCGTCTaGAAAGAGAGATCATCATAC +
Preference number: 4 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQWYLVV*KERSSY
Trigger: GTATGATGATCTCTCTTTGCAGACGACAAGATACCA...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGGCAACCTCTACCTCCTaGCTCAGCCTCCCAAATAGC +
Preference number: 4 (lower is better)
Translates to: IHMDTKMATRDTKDDKREATSTS*LSLPNS
Trigger: GCTATTTGGGAGGCTGAGGCAGGAGGTAGAGGTTGC...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAAGGGTTTTTACTTTCTTaGTGGTGTCCTTTGAAGCAA +
Preference number: 4 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQGFLLS*WCPLKQ
Trigger: TTGCTTCAAAGGACACCAGCAAGAAAGTAAAAACCC...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAAAATTCCATTCTGTGCTaGAGCAACTGGAGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCENSILC*SNWSLE
Trigger: CTCAAGACTCCAGTTGCTCCAGCACAGAATGGAATT...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGAGGTTGCTCCACATCTaGGGGTGGGAAGACACTGGA +
Preference number: 4 (lower is better)
Translates to: IHMDTKMATRDTKDDKRERLLHI*GWEDTG
Trigger: TCCAGTGTCTTCCCACCCCCAGATGTGGAGCAACCT...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGTACCGAAGGGATGGGTaGGGAACACACAGGCAACCT +
Preference number: 4 (lower is better)
Translates to: IHMDTKMATRDTKDDKREYRRDG*GTHRQP
Trigger: AGGTTGCCTGTGTGTTCCCCACCCATCCCTTCGGTA...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAACTACTGCTAGTGATGTaGCCTCCTGAAAAGCCTATA +
Preference number: 4 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCELLLVM*PPEKPI
Trigger: TATAGGCTTTTCAGGAGGCCACATCACTAGCAGTAG...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp ATCTCACTCCCATCTCAGAATTTCCCAAACACCAACCCATCGGCTGCGTTGGGCTGTGACATCTTTGTCTaGTTTTGGTATCAGGGTATT +
Preference number: 4 (lower is better)
Translates to: ISLPSQNFPNTNPSAALGCDIFV*FWYQGI
Trigger: AATACCCTGATACCAAAACCAGACAAAGATGTCACA...GCCCAACGCAGCCGATGGGTTGGTGTTTGGGAAATTCTGAGATGGGAGTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCTTGATCTGCCCACCTTaGCCTCCTAAAAGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFLICPP*PPKSAE
Trigger: CTCAGCACTTTTAGGAGGCCAAGGTGGGCAGATCAA...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCCTGGACTCAAACTCCTaGCCTCATTTGATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFLDSNS*PHLICP
Trigger: TGGGCAGATCAAATGAGGCCAGGAGTTTGAGTCCAG...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCAGCCATCAGAGTAGCTaGGATTACAGGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFSHQSS*DYRHAP
Trigger: TGGTGCATGCCTGTAATCCCAGCTACTCTGATGGCT...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CAA 72 bp GCATGTGATCTACCCCAGAGAATGTTCCATGTGCACTaGAGAAGGATGTGTATTTTGCTGCTGTTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: ACDLPQRMFHVH*RRMCILLLLGG
Trigger: TCCACCCAACAGCAGCAAAATACACATCCTTCTCAAGTGCACATGGAACATTCTCTGGGGTAGATCACATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCACAGTACACATTTGTTaGGATTTACAAGACACTGTG +
Preference number: 4 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSTVHIC*DLQDTV
Trigger: CACAGTGTCTTGTAAATCTCAACAAATGTGTACTGT...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp TTTGCCGAGAGGCCAGTGCACAGCACAAAACTAAGGACTGTTGGTGCATGCTTGCTCTATTATGCCCACTaGTGTCCTCTCATAATTTTT +
Preference number: 4 (lower is better)
Translates to: FAERPVHSTKLRTVGACLLYYAH*CPLIIF
Trigger: AAAAATTATGAGAGGACATCAGTGGGCATAATAGAG...CAAGCATGCACCAACAGTCCTTAGTTTTGTGCTGTGCACTGGCCTCTCGGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp TTTGCCGAGAGGCCAGTGCACAGCACAAAACTAAGGACTGTTGGTGCATGCTTGTTACAGGCCTTTTCTTaGATAAATGGATTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: FAERPVHSTKLRTVGACLLQAFS*INGLLQ
Trigger: TTGCAGCAATCCATTTATTCAAGAAAAGGCCTGTAA...CAAGCATGCACCAACAGTCCTTAGTTTTGTGCTGTGCACTGGCCTCTCGGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGGTGGCTGGTGTGTCTTaGGGTGGACTCTTTGAGTCT +
Preference number: 4 (lower is better)
Translates to: IHMDTKMATRDTKDDKREVAGVS*GGLFES
Trigger: AGACTCAAAGAGTCCACCTCAAGACACACCAGCCAC...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAAACATCACCATTAATATaGTGTAGGCTGTGGGTTTTT +
Preference number: 4 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQTSPLI*CRLWVF
Trigger: AAAAACCCACAGCCTACATCATATTAATGGTGATGT...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCGCCTTGGCACAGTTCTaGATAGAGCTTCTGAGCACA +
Preference number: 4 (lower is better)
Translates to: KAEILDQDCVQLVDQFGAALAQF*IELLST
Trigger: TGTGCTCAGAAGCTCTATGCAGAACTGTGCCAAGGC...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCATACAAAAATGCCCATaGTTTCCCTGTCACCCGCCC +
Preference number: 4 (lower is better)
Translates to: KAEILDQDCVQLVDQFGAIQKCP*FPCHPP
Trigger: GGGCGGGTGACAGGGAAAGCATGGGCATTTTTGTAT...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAAACAGCAATACAAAAATaGCCATGCTTTCCCTGTCAC +
Preference number: 4 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCETAIQK*PCFPCH
Trigger: GTGACAGGGAAAGCATGGGCATTTTTGTATTGCTGT...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGACTGCGAATAGCCACTaGAATCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: IHMDTKMATRDTKDDKRETANSH*NPAWAT
Trigger: TGTTGCCCAGGCTGGATTGCAGTGGCTATTCGCAGT...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAAGACAACACCTGCTTGTaGCATAAATACATACGGCAA +
Preference number: 4 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCEDNTCL*HKYIRQ
Trigger: TTGCCGTATGTATTTATGGCACAAGCAGGTGTTGTC...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp GTGGAAGCAGCCACAGAAGGCAGGCCAGCCATACAAAGGAAAGATGTCCAAAGCTACCAGAAAGACACATaGACCTATATGTTTATCACA +
Preference number: 4 (lower is better)
Translates to: VEAATEGRPAIQRKDVQSYQKDT*TYMFIT
Trigger: TGTGATAAACATATAGGTGCATGTGTCTTTCTGGTA...GCTTTGGACATCTTTCCTTTGTATGGCTGGCCTGCCTTCTGTGGCTGCTTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCGAATGCCTTCACCTTTaGCACCGGCTGATGACTTTG +
Preference number: 4 (lower is better)
Translates to: KAEILDQDCVQLVDQFGAECLHL*HRLMTL
Trigger: CAAAGTCATCAGCCGGTGCCAAAGGTGAAGGCATTC...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAAAAAACTAAGGACTGTTaGTGCATGCTTGTACAGAGC +
Preference number: 4 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCEKTKDC*CMLVQS
Trigger: GCTCTGTACAAGCATGCACCAACAGTCCTTAGTTTT...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATCAGCATATGCTGTTTTaGGGCCCAACCCGCACAAAC +
Preference number: 4 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNQHMLF*GPTRTN
Trigger: GTTTGTGCGGGTTGGGCCCCAAAACAGCATATGCTG...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGACCCATCGGCTGCGTTaGGCCTCAAGGATTAATGAC +
Preference number: 4 (lower is better)
Translates to: IHMDTKMATRDTKDDKRETHRLR*ASRIND
Trigger: GTCATTAATCCTTGAGGCCCAACGCAGCCGATGGGT...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCACACATCATGTCAGCTaGTACCTATGTCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFTHHVS*YLCQHL
Trigger: CAGGTGCTGACATAGGTACCAGCTGACATGATGTGT...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp GTGGAAGCAGCCACAGAAGGCAGGCCAGCCATACAAAGGAAAGATGTCCAAAGCCTAAAATATGGGTTATaGGAGAACTTCAGGTTAAGA +
Preference number: 4 (lower is better)
Translates to: VEAATEGRPAIQRKDVQSLKYGL*ENFRLR
Trigger: TCTTAACCTGAAGTTCTCCCATAACCCATATTTTAG...GCTTTGGACATCTTTCCTTTGTATGGCTGGCCTGCCTTCTGTGGCTGCTTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCTTCTCATTGCTTTTATaGAAGAGAGGGTTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSFSLLL*KRGFSE
Trigger: CTCTGAAAACCCTCTCTTCCATAAAAGCAATGAGAA...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCGTCAGACGAAAGAGCTaGGGAATTCTCAGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFVRRKS*GILRSL
Trigger: AAGAGACCTGAGAATTCCCCAGCTCTTTCGTCTGAC...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAATTCTGTTCCACAGACTaGATAATCTCAAATGACTTC +
Preference number: 4 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQFCSTD*IISNDF
Trigger: GAAGTCATTTGAGATTATCCAGTCTGTGGAACAGAA...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCTTGGTTGAACCACTGTaGAAAGAAGTTTGGAGATTT +
Preference number: 4 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSLVEPL*KEVWRF
Trigger: AAATCTCCAAACTTCTTTCCACAGTGGTTCAACCAA...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAAGGCAGGAATGTAAATTaGTTGAACCACTGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCEGRNVN*LNHCGK
Trigger: CTTTCCACAGTGGTTCAACCAATTTACATTCCTGCC...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp TTTGCCGAGAGGCCAGTGCACAGCACAAAACTAAGGACTGTTGGTGCATGCTTGATGCTTATACACTGCTaGCAGGAATGTAAATTGGTT +
Preference number: 4 (lower is better)
Translates to: FAERPVHSTKLRTVGACLMLIHC*QECKLV
Trigger: AACCAATTTACATTCCTGCCAGCAGTGTATAAGCAT...CAAGCATGCACCAACAGTCCTTAGTTTTGTGCTGTGCACTGGCCTCTCGGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCGGTGGGAAGATTACTTaGAACCAGAAGTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFGGKIT*NQKFEA
Trigger: AGCCTCAAACTTCTGGTTTCAAGTAATCTTCCCACC...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCTTGCAATCCAAACGTTaGCCTCTCCATCCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFLQSKR*PLHPLS
Trigger: AGAAAGAGGATGGAGAGGGCAACGTTTGGATTGCAA...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGTGGCTATGTCCACGATaGCTTGGCACAGTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: IHMDTKMATRDTKDDKREWLCPR*LGTVLH
Trigger: ATGCAGAACTGTGCCAAGGCATCGTGGACATAGCCA...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCCTCTGCTCACAAAGCTaGCTTTGTGTACCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFLCSQS*LCVPKL
Trigger: CAACTTTGGTACACAAAGGCAGCTTTGTGAGCAGAG...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCAGGCAACCTCCAATATaGTCTGACGTCCAATCCATA +
Preference number: 4 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFRQPPI*SDVQSI
Trigger: TATGGATTGGACGTCAGAGCATATTGGAGGTTGCCT...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCGCTCCTCTGATACTGTaGAGTCAAATGACAGAACCA +
Preference number: 4 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFAPLIL*SQMTEP
Trigger: TGGTTCTGTCATTTGACTGCACAGTATCAGAGGAGC...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAAAGCATTCAGCCTTATTaGACAAGAAGTTACAAGTTA +
Preference number: 4 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQSIQPY*TRSYKL
Trigger: TAACTTGTAACTTCTTGTGCAATAAGGCTGAATGCT...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATACTCCATTCCTCTCTTaGCATGTGATGCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNTPFLS*HVMPSA
Trigger: GGCAGAAGGCATCACATGGCAAGAGAGGAATGGAGT...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCGGGTTCATTTTCCTTTaGCTTCAGGGACTGCTATGG +
Preference number: 4 (lower is better)
Translates to: KAEILDQDCVQLVDQFGAGFIFL*LQGLLW
Trigger: CCATAGCAGTCCCTGAAGGCAAAGGAAAATGAACCC...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp TTTGCCGAGAGGCCAGTGCACAGCACAAAACTAAGGACTGTTGGTGCATGCTTGTCTTTGAGTCTTTCCTaGTTAGAATTTGTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: FAERPVHSTKLRTVGACLSLSLS*LEFVEL
Trigger: AAGCTCAACAAATTCTAAGCAGGAAAGACTCAAAGA...CAAGCATGCACCAACAGTCCTTAGTTTTGTGCTGTGCACTGGCCTCTCGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGCAGTTGTGCGATCTCTaGTCACTGCAACCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: IHMDTKMATRDTKDDKREQLCDL*SLQPPL
Trigger: AAGAGGAGGTTGCAGTGAGCAGAGATCGCACAACTG...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCGGAAGACACTGGAAATaGCTATGTCCACGATGCCTT +
Preference number: 4 (lower is better)
Translates to: KAEILDQDCVQLVDQFGAGRHWK*LCPRCL
Trigger: AAGGCATCGTGGACATAGCCATTTCCAGTGTCTTCC...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATTTCTCAGGTCTCTTCTaGGCATGTGCACAGTCCTAC +
Preference number: 4 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNFSGLF*ACAQSY
Trigger: GTAGGACTGTGCACATGCCCAGAAGAGACCTGAGAA...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAATGTTTTTCCTCAAAGTaGGAAAGGTTTTGGCCACTA +
Preference number: 4 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCECFSSK*ERFWPL
Trigger: TAGTGGCCAAAACCTTTCCCACTTTGAGGAAAAACA...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CAA 72 bp CTGTTTACTCAGCTTACACTGAACACAAATGACATCTaGTTCTCCCTACTGCTAGTGATGTGGCCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: LFTQLTLNTNDI*FSLLLVMWPPE
Trigger: TTCAGGAGGCCACATCACTAGCAGTAGGGAGAACAAGATGTCATTTGTGTTCAGTGTAAGCTGAGTAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCCTGTCCTTGAGTTACTaGTTGGTGGCTGAATTCCAT +
Preference number: 4 (lower is better)
Translates to: KAEILDQDCVQLVDQFGALSLSY*LVAEFH
Trigger: ATGGAATTCAGCCACCAATCAGTAACTCAAGGACAG...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAACATGGACCAAAAGTATaGAGCCTGACTGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKHGPKV*SLTGSQ
Trigger: CTGGCTCCCAGTCAGGCTTCATACTTTTGGTCCATG...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAACCCTGGGTCAGGCAATaGTCTCTTTCATGGGCTAAG +
Preference number: 4 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKPWVRQ*SLSWAK
Trigger: CTTAGCCCATGAAAGAGATCATTGCCTGACCCAGGG...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCCTTCCATCTCATCTTTaGGAGTTGCCTTTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: KAEILDQDCVQLVDQFGALPSHL*ELPFFP
Trigger: GGGAAAGAAAGGCAACTCGCAAAGATGAGATGGAAG...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCCTGGCCTTGGTGAAATaGTTTACAAGAACTCGATAC +
Preference number: 4 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFLALVK*FTRTRY
Trigger: GTATCGAGTTCTTGTAAAGCATTTCACCAAGGCCAG...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCTTTGCCTTCAGGGACTaGTATGGTTTGAATGTGTTC +
Preference number: 4 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFFAFRD*YGLNVF
Trigger: GAACACATTCAAACCATAGCAGTCCCTGAAGGCAAA...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAACTTGGCCTCCCGAAGTaGTGGGATTACAGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKLGLPK*WDYRPF
Trigger: AAAAGGCCTGTAATCCCAGCACTTCGGGAGGCCAAG...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCTGCTGTTGGGTGGAGTaGCTTGTAGATATTTGTCAA +
Preference number: 4 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFCCWVE*LVDICQ
Trigger: TTGACAAATATCTACAAGGCACTCCACCCAACAGCA...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGAACTCGAATCCTTCCTaGAAGGAAACCTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: IHMDTKMATRDTKDDKRENSNPS*KETCPS
Trigger: AGAGGGACAGGTTTCCTTCCAGGAAGGATTCGAGTT...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAATACTATGTATTGCATTaGAGAGGGGTTCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCEYYVLH*RGVHFP
Trigger: AGGAAAATGAACCCCTCTCCAATGCAATACATAGTA...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCTCCTACACATGTGTGTaGCCTTCTGCATTCTTAGGA +
Preference number: 4 (lower is better)
Translates to: KAEILDQDCVQLVDQFGASYTCV*PSAFLG
Trigger: TCCTAAGAATGCAGAAGGCCACACACATGTGTAGGA...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATTTCCAGCTACTTGGGTaGCTAAGGTGGGAAGATTAC +
Preference number: 4 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNFQLLG*LRWEDY
Trigger: GTAATCTTCCCACCTTAGCCACCCAAGTAGCTGGAA...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATTCCTTTGCAGTAACATaGATGCTGCTGGAGGCCATT +
Preference number: 4 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNSFAVT*MLLEAI
Trigger: AATGGCCTCCAGCAGCATCCATGTTACTGCAAAGGA...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CAA 72 bp AAATGTGTTGGAAACTTAATCTCTACTGCAATAGTGTaGAGAGGTGGGACCTGTAAGAGGTTAGGTCACGAG +
Preference number: 4 (lower is better)
Translates to: KCVGNLISTAIV*RGGTCKRLGHE
Trigger: CTCGTGACCTAACCTCTTACAGGTCCCACCTCTCAACACTATTGCAGTAGAGATTAAGTTTCCAACACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CAA 72 bp TGCAACAATCTTCAAGTTCTGCTACTATGTATTGCATaGGAGAGGGGTTCATTTTCCTTTGCCTTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: CNNLQVLLLCIA*ERGSFSFAFRD
Trigger: GTCCCTGAAGGCAAAGGAAAATGAACCCCTCTCCAATGCAATACATAGTAGCAGAACTTGAAGATTGTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CAA 72 bp AGAATGTTCCATGTGCACTTGAGAAGGATGTGTATTTaGCTGCTGTTGGGTGGAGTGCCTTGTAGATATTTG +
Preference number: 4 (lower is better)
Translates to: RMFHVHLRRMCI*LLLGGVPCRYL
Trigger: CAAATATCTACAAGGCACTCCACCCAACAGCAGCAAAATACACATCCTTCTCAAGTGCACATGGAACATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCGTTCAGGGCTTGTCTTaGTTAGCTTCACTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: KAEILDQDCVQLVDQFGAVQGLS*LASLKK
Trigger: CTTCTTTAGTGAAGCTAATCAAGACAAGCCCTGAAC...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATCCAGATATAGCCCCTTaGTATTGGACTTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNPDIAP*YWTSHP
Trigger: AGGATGAGAAGTCCAATATCAAGGGGCTATATCTGG...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCACTAAGGACTGTTGGTaGATGCTTGTACAGAGCTTA +
Preference number: 4 (lower is better)
Translates to: KAEILDQDCVQLVDQFGATKDCW*MLVQSL
Trigger: TAAGCTCTGTACAAGCATGCACCAACAGTCCTTAGT...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATTTCGAGGCTGCAGTGTaGTATGATTACAACTGCGAA +
Preference number: 4 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNFEAAV*YDYNCE
Trigger: TTCGCAGTTGTAATCATAGCACACTGCAGCCTCGAA...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAAACAATCTTCAAGTTCTaGTACTATGTATTGCATTGG +
Preference number: 4 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCETIFKF*YYVLHW
Trigger: CCAATGCAATACATAGTAGCAGAACTTGAAGATTGT...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAAGGGCCACTTGGGGAGTaGAATTTTACTGACTCCTCA +
Preference number: 4 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKGPLGE*NFTDSS
Trigger: TGAGGAGTCAGTAAAATTCCACTCCCCAAGTGGCCC...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATCCTACACGTTCTAACTaGGTATACATCTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNPTRSN*VYIFPG
Trigger: TCCTGGGAAGATGTATACCCAGTTAGAACGTGTAGG...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCATTGCTGCAAGCCTCTaGTTAATGTCTAGACAGTTT +
Preference number: 4 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFIAASL*LMSRQF
Trigger: AAACTGTCTAGACATTAACCAGAGGCTTGCAGCAAT...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAACTTACAATCTGGTCCTaGGCTTTTCCCTGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKLTIWS*AFPCGK
Trigger: CTTCCCACAGGGAAAAGCCCAGGACCAGATTGTAAG...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAATTCCCAAGAGATTATTaGTCTGCTATTTGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCEFPRDY*SAICFS
Trigger: AGAAAAGCAAATAGCAGACCAATAATCTCTTGGGAA...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CAA 72 bp CATTCCCAGTTTTTCCTTCTAAGTCTTTTGGTCAGTTaGTTTGTTCCAACTGTTACAGCCACCTTAGGAAGC +
Preference number: 4 (lower is better)
Translates to: HSQFFLLSLLVS*FVPTVTATLGS
Trigger: GCTTCCTAAGGTGGCTGTAACAGTTGGAACAAACAAACTGACCAAAAGACTTAGAAGGAAAAACTGGGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATAATTCCAAATTTCCATaGGAGCCAATTCACCTGGGA +
Preference number: 4 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNNSKFP*EPIHLG
Trigger: TCCCAGGTGAATTGGCTCTCATGGAAATTTGGAATT...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATAGGCATATTGCTGTCTaGGGTTCTGATTTAACTGTC +
Preference number: 4 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNRHIAV*GSDLTV
Trigger: GACAGTTAAATCAGAACCTCAGACAGCAATATGCCT...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCTACTCCACTTCTCTTTaGGTTACTGTTTGCATGGTA +
Preference number: 4 (lower is better)
Translates to: KAEILDQDCVQLVDQFGAYSTSL*VTVCMV
Trigger: TACCATGCAAACAGTAACTCAAAGAGAAGTGGAGTA...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATTACTTGTTTTGTGCCTaGTATTGGGAAGAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNYLFCA*YWEESS
Trigger: GGAGCTTTCTTCCCAATATCAGGCACAAAACAAGTA...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATGGTTCAGGGCAGACTTaGCACTTTGTTTCTAAAACA +
Preference number: 4 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNGSGQT*HFVSKT
Trigger: TGTTTTAGAAACAAAGTGGCAAGTCTGCCCTGAACC...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCTCTGCTACTATGTATTaGATTGGAGAGGGGTTCATT +
Preference number: 4 (lower is better)
Translates to: KAEILDQDCVQLVDQFGASATMY*IGEGFI
Trigger: AATGAACCCCTCTCCAATGCAATACATAGTAGCAGA...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCACCAAAAAGGCCAAATaGCAATTCTCTGGTAATGAA +
Preference number: 4 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFTKKAK*QFSGNE
Trigger: TTCATTACCAGAGAATTGCCATTTGGCCTTTTTGGT...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCTGGAAATTATCAACATaGTATGGTTCTGAAGCAGTC +
Preference number: 4 (lower is better)
Translates to: KAEILDQDCVQLVDQFGAWKLST*YGSEAV
Trigger: GACTGCTTCAGAACCATATCATGTTGATAATTTCCA...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCCTTCCCGTAGTTCTTTaGATACTCTTTTTGAATGCA +
Preference number: 4 (lower is better)
Translates to: KAEILDQDCVQLVDQFGALPVVL*ILFLNA
Trigger: TGCATTCAAAAAGAGTATTCAAAGAACTACGGGAAG...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATTACACTGAACACAAATaGCATCTTGTTCTCCCTACT +
Preference number: 4 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNYTEHK*HLVLPT
Trigger: AGTAGGGAGAACAAGATGTCATTTGTGTTCAGTGTA...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATAGACTTCCTGACATCTaGATTCTTAGCTCTGTTACT +
Preference number: 4 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNRLPDI*ILSSVT
Trigger: AGTAACAGAGCTAAGAATTCAGATGTCAGGAAGTCT...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATTATGGTGAATTTAAATaGCCAGTGATATCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNYGEFK*PVISQD
Trigger: GTCCTGGGATATCACTGGTCATTTAAATTCACCATA...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATGGCCATTATCCTAAGTaGAATAACACAGGAACAGAA +
Preference number: 4 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNGHYPK*NNTGTE
Trigger: TTCTGTTCCTGTGTTATTTCACTTAGGATAATGGCC...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATTTTTGGAGAGATATCTaGACTCCCATGTTTACTGCA +
Preference number: 4 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNFWRDI*TPMFTA
Trigger: TGCAGTAAACATGGGAGTGCAGATATCTCTCCAAAA...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAAGTAGTTTTCAATCTTTaGTCCCCTCCTTCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKVVFNL*SPPSLL
Trigger: CAGGAGAGAAGGAGGGGAGCAAAGATTGAAAACTAC...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAACCTTTCCAATCTGAATaGGCAGTCTTCTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKPFQSE*AVFFPS
Trigger: GGAAGGAAAGAAGACTGCGCATTCAGATTGGAAAGG...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGCTTTTCTTGAATAAATaGATTGCTGCAAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: IHMDTKMATRDTKDDKRELFLNK*IAASLW
Trigger: CCAGAGGCTTGCAGCAATCCATTTATTCAAGAAAAG...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCATCTTTGTCTGGTTTTaGTATCAGGGTATTAAGAGT +
Preference number: 4 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFIFVWF*YQGIKS
Trigger: ACTCTTAATACCCTGATACCAAAACCAGACAAAGAT...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCTTTTCTCCCATTCTGTaGGTTTTTACTTTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: KAEILDQDCVQLVDQFGAFSPIL*VFTFLL
Trigger: CAGCAAGAAAGTAAAAACCCACAGAATGGGAGAAAA...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CAA 72 bp AATAGTCTCAGTGCTTCACTGAGAAGCTCATCAGTTTaGAAGGACAATCTGTTGGCTTATGTATTGGGTAAC +
Preference number: 4 (lower is better)
Translates to: NSLSASLRSSSV*KDNLLAYVLGN
Trigger: GTTACCCAATACATAAGCCAACAGATTGTCCTTCAAAACTGATGAGCTTCTCAGTGAAGCACTGAGACTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CAA 72 bp ATGCTTGCAACAATCTTCAAGTTCTGCTACTATGTATaGCATTGGAGAGGGGTTCATTTTCCTTTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: MLATIFKFCYYV*HWRGVHFPLPS
Trigger: TGAAGGCAAAGGAAAATGAACCCCTCTCCAATGCAATACATAGTAGCAGAACTTGAAGATTGTTGCAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CAA 72 bp GGAGTGGGAATAGGGTACATTAAAATGTCAGAAAGCTaGCTTTTCTTACCCAGATGCAACCCTTTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: GVGIGYIKMSES*LFLPRCNPFLF
Trigger: AAAAAGGAAAGGGTTGCATCTGGGTAAGAAAAGCAAGCTTTCTGACATTTTAATGTACCCTATTCCCACTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAAGAGCAACTGGAGTCTTaGGATTGGTTGGATAAATCA +
Preference number: 4 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKEQLES*DWLDKS
Trigger: TGATTTATCCAACCAATCTCAAGACTCCAGTTGCTC...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAAGCACTTGTTAGGTACTaGTTGAACTCCTTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKALVRY*LNSLKN
Trigger: GTTCTTCAAGGAGTTCAATCAGTACCTAACAAGTGC...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGCCACAATTAAAACAATaGATTAAACCACCACTACCC +
Preference number: 4 (lower is better)
Translates to: IHMDTKMATRDTKDDKREPQLKQ*IKPPLP
Trigger: GGGTAGTGGTGGTTTAATTCATTGTTTTAATTGTGG...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCAAGAGTGTTGTGTATTaGCAAATGCTTTTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: KAEILDQDCVQLVDQFGAKSVVY*QMLFQC
Trigger: ACACTGAAAAAGCATTTGGCAATACACAACACTCTT...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGTTTGAAATCAGGAAGTaGACATCCTCCAACTTTGTT +
Preference number: 4 (lower is better)
Translates to: IHMDTKMATRDTKDDKREFEIRK*TSSNFV
Trigger: AACAAAGTTGGAGGATGTGCACTTCCTGATTTCAAA...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATACATGGACACAAAAATaGCAACAAGAGACACTAAAG +
Preference number: 4 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNTWTQK*QQETLK
Trigger: CTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGT...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CAA 72 bp CACATGTGTGTGGCCTTCTGCATTCTTAGGAATAGGTaGAAGCTTTTCAAAACGTCCTATAGAAATCTCATT +
Preference number: 4 (lower is better)
Translates to: HMCVAFCILRNR*KLFKTSYRNLI
Trigger: AATGAGATTTCTATAGGACGTTTTGAAAAGCTTCAACCTATTCCTAAGAATGCAGAAGGCCACACACATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CAA 72 bp AAGAAGGCTGAGATTCTTGATCAGGATTGTGTTCAATaGGTAGATCAATTTGGGGCCTATTTTCATCCTAAC +
Preference number: 4 (lower is better)
Translates to: KKAEILDQDCVQ*VDQFGAYFHPN
Trigger: GTTAGGATGAAAATAGGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAAGTTGTTACTCTATTATaGCCACTGATGTCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKVVTLL*PLMSSH
Trigger: ATGAGAGGACATCAGTGGGCATAATAGAGTAACAAC...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGAGCAGATTTATTATCTaGCCTTTTACAGAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: IHMDTKMATRDTKDDKRESRFII*PFTESL
Trigger: CAGACTTTCTGTAAAAGGCCAGATAATAAATCTGCT...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATAGGACTTTTTCTATATaGTATCTTGTCGTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNRTFSI*YLVVCK
Trigger: TTTGCAGACGACAAGATACCATATAGAAAAAGTCCT...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CCA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATTTTTTACTTTCTTGCTaGTGTCCTTTGAAGCAAAAC +
Preference number: 4 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNFLLSC*CPLKQN
Trigger: GTTTTGCTTCAAAGGACACCAGCAAGAAAGTAAAAA...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CAA 72 bp TCACCCCAAGGTAACACCCTCACATCCTATCAACTATaGCTGTACCTAAGAAATAATTTCTATCATTATTGC +
Preference number: 4 (lower is better)
Translates to: SPQGNTLTSYQL*LYLRNNFYHYC
Trigger: GCAATAATGATAGAAATTATTTCTTAGGTACAGCAATAGTTGATAGGATGTGAGGGTGTTACCTTGGGGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAATTACTCAGCTTACACTaGACACAAATGACATCTTGT +
Preference number: 4 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKLLSLH*TQMTSC
Trigger: ACAAGATGTCATTTGTGTTCAGTGTAAGCTGAGTAA...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR TCA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAAGACACTCTTCTCAATTaGGGAGTATTTTCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKDTLLN*GVFSSL
Trigger: AAGAGAAGAAAATACTCCTCAATTGAGAAGAGTGTC...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR GCA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAAAAATGTCAGAAAGCTTaGTTTTCTTACCCAGATGCA +
Preference number: 4 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKKCQKA*FSYPDA
Trigger: TGCATCTGGGTAAGAAAAGCAAGCTTTCTGACATTT...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
37% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CAA 72 bp TTCACTTTAATGTTTTTCCTCAAAGTGGGAAAGGTTTaGGCCACTATTTCTTCCAGTATATGTTTTATCCCC +
Preference number: 4 (lower is better)
Translates to: FTLMFFLKVGKV*ATISSSICFIP
Trigger: GGGGATAAAACATATACTGGAAGAAATAGTGGCCAAAACCTTTCCCACTTTGAGGAAAAACATTAAAGTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
3UTR CAA 72 bp AGGTACAACAAATTATTGCTGACTGCAGTCACCCTGTaGTGCTATCAAATACTAGATATTTTTCAATCATGG +
Preference number: 4 (lower is better)
Translates to: RYNKLLLTAVTL*CYQILDIFQSW
Trigger: CCATGATTGAAAAATATCTAGTATTTGATAGCACAACAGGGTGACTGCAGTCAGCAATAATTTGTTGTACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS GCA 90 bp AGTGGCCGGTGGCGAGGAGCAGCCGGGAGACCTCGGCGTAGACGCTaGTGTTCTCATCGCGTACCACGAAGGTGTACATGGCGAAGCGCC +
Preference number: 5 (lower is better)
Translates to: SGRWRGAAGRPRRRR*CSHRVPRRCTWRSA
Trigger: GGCGCTTCGCCATGTACACCTTCGTGGTACGCGATGAGAACAGCAGCGTCTACGCCGAGGTCTCCCGGCTGCTCCTCGCCACCGGCCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000233336.7
ENST00000485537.1
CDS TCA 90 bp CCACACCTCACCAGGCAAGCCTGCCCAGCACCACGTGTCCAGCCATaGCAGGAGAGCAGCTCAGCAAGTGCTGTCGGTTGCCTCGAATGC +
Preference number: 5 (lower is better)
Translates to: PHLTRQACPAPRVQP*QESSSASAVGCLEC
Trigger: GCATTCGAGGCAACCGACAGCACTTGCTGAGCTGCTCTCCTGTCATGGCTGGACACGTGGTGCTGGGCAGGCTTGCCTGGTGAGGTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460450.1
CDS GCA 90 bp CCCAGCACCACGTGTCCAGCCATGACAGGAGAGCAGCTCAGCAAGTaGTGTCGGTTGCCTCGAATGCTGCTGACAGGTCCAAGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: PSTTCPAMTGEQLSK*CRLPRMLLTGPRGW
Trigger: CCACCCCCTTGGACCTGTCAGCAGCATTCGAGGCAACCGACAGCACTTGCTGAGCTGCTCTCCTGTCATGGCTGGACACGTGGTGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460450.1
CDS CCA 90 bp CAAGGCAGCAGGGAGTGCCCTCTGTCACAGCTTGATGAAGGCAGCTaGCTGGGTCTGAGGTTGCTCCACATCTGGGGGTGGGAAGACACT +
Preference number: 5 (lower is better)
Translates to: QGSRECPLSQLDEGS*LGLRLLHIWGWEDT
Trigger: AGTGTCTTCCCACCCCCAGATGTGGAGCAACCTCAGACCCAGCCAGCTGCCTTCATCAAGCTGTGACAGAGGGCACTCCCTGCTGCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233336.7
ENST00000460450.1
CDS CCA 90 bp CCGTGGACATGTGGGTATGGTGGTGCCCAGCCAGCTTCAACCATGTaGATGAAGGTAATTCCCTCGGGGAGAGCAGGGAAGACAGGGAGG +
Preference number: 5 (lower is better)
Translates to: PWTCGYGGAQPASTM*MKVIPSGRAGKTGR
Trigger: CCTCCCTGTCTTCCCTGCTCTCCCCGAGGGAATTACCTTCATCCACATGGTTGAAGCTGGCTGGGCACCACCATACCCACATGTCCACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485537.1
CDS CCA 90 bp GATGAAGGCAGCTGGCTGGGTCTGAGGTTGCTCCACATCTGGGGGTaGGAAGACACTGGAAATGGCTATGTCCACGATGCCTTGGCACAG +
Preference number: 5 (lower is better)
Translates to: DEGSWLGLRLLHIWG*EDTGNGYVHDALAQ
Trigger: CTGTGCCAAGGCATCGTGGACATAGCCATTTCCAGTGTCTTCCCACCCCCAGATGTGGAGCAACCTCAGACCCAGCCAGCTGCCTTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233336.7
ENST00000460450.1
CDS CCA 90 bp AAGTGCTGTCGGTTGCCTCGAATGCTGCTGACAGGTCCAAGGGGGTaGGGACAGAAAGAGGCTGCTGGAGGTGGCAATAAGGACTTGGCT +
Preference number: 5 (lower is better)
Translates to: KCCRLPRMLLTGPRG*GQKEAAGGGNKDLA
Trigger: AGCCAAGTCCTTATTGCCACCTCCAGCAGCCTCTTTCTGTCCCCACCCCCTTGGACCTGTCAGCAGCATTCGAGGCAACCGACAGCACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460450.1
CDS-3UTR CAA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAAGTGTGGCCGAGGCTGTaGTGGAGCTGGGGAAAGGGG +
Preference number: 5 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQVWPRL*WSWGKG
Trigger: CCCCTTTCCCCAGCTCCACAACAGCCTCGGCCACAC...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS CCA 90 bp CAGCTTGATGAAGGCAGCTGGCTGGGTCTGAGGTTGCTCCACATCTaGGGGTGGGAAGACACTGGAAATGGCTATGTCCACGATGCCTTG +
Preference number: 5 (lower is better)
Translates to: QLDEGSWLGLRLLHI*GWEDTGNGYVHDAL
Trigger: CAAGGCATCGTGGACATAGCCATTTCCAGTGTCTTCCCACCCCCAGATGTGGAGCAACCTCAGACCCAGCCAGCTGCCTTCATCAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233336.7
ENST00000460450.1
CDS-3UTR CAA 90 bp GTGGAAGCAGCCACAGAAGGCAGGCCAGCCATACAAAGGAAAGATGTCCAAAGCCATGCAGGGGCACCGTaGACCTCAATGAGCCACACC +
Preference number: 5 (lower is better)
Translates to: VEAATEGRPAIQRKDVQSHAGAP*TSMSHT
Trigger: GGTGTGGCTCATTGAGGTCAACGGTGCCCCTGCATG...GCTTTGGACATCTTTCCTTTGTATGGCTGGCCTGCCTTCTGTGGCTGCTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp GTGGAAGCAGCCACAGAAGGCAGGCCAGCCATACAAAGGAAAGATGTCCAAAGCGGGGGAAAGCAACCTTaGTCTGGGGCAGGGCCACTT +
Preference number: 5 (lower is better)
Translates to: VEAATEGRPAIQRKDVQSGGKQP*SGAGPL
Trigger: AAGTGGCCCTGCCCCAGACAAAGGTTGCTTTCCCCC...GCTTTGGACATCTTTCCTTTGTATGGCTGGCCTGCCTTCTGTGGCTGCTTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS GCA 90 bp CCACATCTGGGGGTGGGAAGACACTGGAAATGGCTATGTCCACGATaGCTTGGCACAGTTCTGCATAGAGCTTCTGAGCACATGCAGGGG +
Preference number: 5 (lower is better)
Translates to: PHLGVGRHWKWLCPR*LGTVLHRASEHMQG
Trigger: CCCCTGCATGTGCTCAGAAGCTCTATGCAGAACTGTGCCAAGGCATCGTGGACATAGCCATTTCCAGTGTCTTCCCACCCCCAGATGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS CCA 90 bp CTGGCTGGGTCTGAGGTTGCTCCACATCTGGGGGTGGGAAGACACTaGAAATGGCTATGTCCACGATGCCTTGGCACAGTTCTGCATAGA +
Preference number: 5 (lower is better)
Translates to: LAGSEVAPHLGVGRH*KWLCPRCLGTVLHR
Trigger: TCTATGCAGAACTGTGCCAAGGCATCGTGGACATAGCCATTTCCAGTGTCTTCCCACCCCCAGATGTGGAGCAACCTCAGACCCAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233336.7
ENST00000460450.1
CDS CCA 90 bp CCTCCTATCTCCTGCGCTTTCCTACCCGTGGACATGTGGGTATGGTaGTGCCCAGCCAGCTTCAACCATGTGGATGAAGGTAATTCCCTC +
Preference number: 5 (lower is better)
Translates to: PPISCAFLPVDMWVW*CPASFNHVDEGNSL
Trigger: GAGGGAATTACCTTCATCCACATGGTTGAAGCTGGCTGGGCACCACCATACCCACATGTCCACGGGTAGGAAAGCGCAGGAGATAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485537.1
CDS-3UTR CAA 90 bp GTGGAAGCAGCCACAGAAGGCAGGCCAGCCATACAAAGGAAAGATGTCCAAAGCAGGTTGAATCTGGGGTaGTCTCGCCGCAGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: VEAATEGRPAIQRKDVQSRLNLG*SRRSLF
Trigger: GAAGAGGCTGCGGCGAGACAACCCCAGATTCAACCT...GCTTTGGACATCTTTCCTTTGTATGGCTGGCCTGCCTTCTGTGGCTGCTTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS CCA 90 bp GGGTCTGAGGTTGCTCCACATCTGGGGGTGGGAAGACACTGGAAATaGCTATGTCCACGATGCCTTGGCACAGTTCTGCATAGAGCTTCT +
Preference number: 5 (lower is better)
Translates to: GSEVAPHLGVGRHWK*LCPRCLGTVLHRAS
Trigger: AGAAGCTCTATGCAGAACTGTGCCAAGGCATCGTGGACATAGCCATTTCCAGTGTCTTCCCACCCCCAGATGTGGAGCAACCTCAGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS CCA 90 bp TTGGCTGGGGACCTGCAAAGAACAGTTTCTGTGAGGCAATCAGGATaGGAGCCAGCCTGGAATGGACTGGAACATGGATGGGAACAGAGG +
Preference number: 5 (lower is better)
Translates to: LAGDLQRTVSVRQSG*EPAWNGLEHGWEQR
Trigger: CCTCTGTTCCCATCCATGTTCCAGTCCATTCCAGGCTGGCTCCCATCCTGATTGCCTCACAGAAACTGTTCTTTGCAGGTCCCCAGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460450.1
CDS CCA 90 bp GGGTCTGAGGTTGCTCCACATCTGGGGGTGGGAAGACACTGGAAATaGCTATGTCCACGATGCCTTGGCACAGTTCTGCATAGAGCTTCA +
Preference number: 5 (lower is better)
Translates to: GSEVAPHLGVGRHWK*LCPRCLGTVLHRAS
Trigger: TGAAGCTCTATGCAGAACTGTGCCAAGGCATCGTGGACATAGCCATTTCCAGTGTCTTCCCACCCCCAGATGTGGAGCAACCTCAGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460450.1
CDS GCA 90 bp AAAGAGCAATCCAGTCATTTCACCATTCCCTGGAGCAGGACCCCGTaGTTTTTCCAAGGCAGCAGGGAGTGCCCTCTGTCACAGCTTGAT +
Preference number: 5 (lower is better)
Translates to: KEQSSHFTIPWSRTP*FFQGSRECPLSQLD
Trigger: ATCAAGCTGTGACAGAGGGCACTCCCTGCTGCCTTGGAAAAAGCACGGGGTCCTGCTCCAGGGAATGGTGAAATGACTGGATTGCTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000233336.7
ENST00000460450.1
CDS-3UTR CAA 90 bp GTGGAAGCAGCCACAGAAGGCAGGCCAGCCATACAAAGGAAAGATGTCCAAAGCGACTCCATTCCTCTCTaGCCATGTGATGCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: VEAATEGRPAIQRKDVQSDSIPL*PCDAFC
Trigger: GCAGAAGGCATCACATGGCAAGAGAGGAATGGAGTC...GCTTTGGACATCTTTCCTTTGTATGGCTGGCCTGCCTTCTGTGGCTGCTTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS GCA 90 bp CCACATCTGGGGGTGGGAAGACACTGGAAATGGCTATGTCCACGATaGCTTGGCACAGTTCTGCATAGAGCTTCACAGAGAGGAGACAAA +
Preference number: 5 (lower is better)
Translates to: PHLGVGRHWKWLCPR*LGTVLHRASQRGDK
Trigger: TTTGTCTCCTCTCTGTGAAGCTCTATGCAGAACTGTGCCAAGGCATCGTGGACATAGCCATTTCCAGTGTCTTCCCACCCCCAGATGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460450.1
CDS-3UTR CAA 90 bp GTGGAAGCAGCCACAGAAGGCAGGCCAGCCATACAAAGGAAAGATGTCCAAAGCTATGTCCACGATGCCTaGGCACAGTTCTGCATAGAG +
Preference number: 5 (lower is better)
Translates to: VEAATEGRPAIQRKDVQSYVHDA*AQFCIE
Trigger: CTCTATGCAGAACTGTGCCAAGGCATCGTGGACATA...GCTTTGGACATCTTTCCTTTGTATGGCTGGCCTGCCTTCTGTGGCTGCTTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS TCA 90 bp GACTATCCCAACTGCAGAACCAACTTCCCACTTGTAAAAACACAATaGCGTGCAGGCTTACTGAGCACATGCAGGGGCACCGTTGACCTC +
Preference number: 5 (lower is better)
Translates to: DYPNCRTNFPLVKTQ*RAGLLSTCRGTVDL
Trigger: GAGGTCAACGGTGCCCCTGCATGTGCTCAGTAAGCCTGCACGTCATTGTGTTTTTACAAGTGGGAAGTTGGTTCTGCAGTTGGGATAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476615.1
CDS-3UTR CAA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCTCTCATCTTTGCGAGTaGCCTTTCTTTCCCCTGCTG +
Preference number: 5 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSSHLCE*PFFPLL
Trigger: CAGCAGGGGAAAGAAAGGCAACTCGCAAAGATGAGA...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS TCA 90 bp AAGGGTCTCCTATCACTGTGGCATCCTCCCTCACAGCAGTCAAAGTaGCTACACTTGTACCCACAGACTATCCCAACTGCAGAACCAACT +
Preference number: 5 (lower is better)
Translates to: KGLLSLWHPPSQQSK*LHLYPQTIPTAEPT
Trigger: AGTTGGTTCTGCAGTTGGGATAGTCTGTGGGTACAAGTGTAGTCACTTTGACTGCTGTGAGGGAGGATGCCACAGTGATAGGAGACCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476615.1
CDS CCA 90 bp CTGCAAAGAACAGTTTCTGTGAGGCAATCAGGATGGGAGCCAGCCTaGAATGGACTGGAACATGGATGGGAACAGAGGAATAGAAGACAG +
Preference number: 5 (lower is better)
Translates to: LQRTVSVRQSGWEPA*NGLEHGWEQRNRRQ
Trigger: CTGTCTTCTATTCCTCTGTTCCCATCCATGTTCCAGTCCATTCCAGGCTGGCTCCCATCCTGATTGCCTCACAGAAACTGTTCTTTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460450.1
CDS-3UTR CAA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAACACCGGCTGATGACTTaGCAATCCAAACGTTGCCCT +
Preference number: 5 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCEHRLMT*QSKRCP
Trigger: AGGGCAACGTTTGGATTGCAAAGTCATCAGCCGGTG...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGTGGCTGGGTCTGAGGTaGCTCCACATCTGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: IHMDTKMATRDTKDDKREWLGLR*LHIWGW
Trigger: CCACCCCCAGATGTGGAGCAACCTCAGACCCAGCCA...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCTCTCCAGTACAGATTTaGTGTCCAGAACCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSSPVQI*CPEPEP
Trigger: TGGCTCTGGTTCTGGACACAAAATCTGTACTGGAGA...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp TTTGCCGAGAGGCCAGTGCACAGCACAAAACTAAGGACTGTTGGTGCATGCTTGGTATGTGAAACCTGTTaGGAGTGGAGTGCCTACACA +
Preference number: 5 (lower is better)
Translates to: FAERPVHSTKLRTVGACLVCETC*EWSAYT
Trigger: TGTGTAGGCACTCCACTCCAAACAGGTTTCACATAC...CAAGCATGCACCAACAGTCCTTAGTTTTGTGCTGTGCACTGGCCTCTCGGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAATCTGGTAATGAAGCTTaGGAGGAGTTCCAATCCCCT +
Preference number: 5 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQSGNEA*EEFQSP
Trigger: AGGGGATTGGAACTCCTCCAAAGCTTCATTACCAGA...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp TTTGCCGAGAGGCCAGTGCACAGCACAAAACTAAGGACTGTTGGTGCATGCTTGAGAAGGATGTGTATTTaGCTGCTGTTGGGTGGAGTG +
Preference number: 5 (lower is better)
Translates to: FAERPVHSTKLRTVGACLRRMCI*LLLGGV
Trigger: CACTCCACCCAACAGCAGCAAAATACACATCCTTCT...CAAGCATGCACCAACAGTCCTTAGTTTTGTGCTGTGCACTGGCCTCTCGGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp TTTGCCGAGAGGCCAGTGCACAGCACAAAACTAAGGACTGTTGGTGCATGCTTGCTTTCCCTCATCAAATaGTCTTGGCCTCCTTGTCGA +
Preference number: 5 (lower is better)
Translates to: FAERPVHSTKLRTVGACLLSLIK*SWPPCR
Trigger: TCGACAAGGAGGCCAAGACAATTTGATGAGGGAAAG...CAAGCATGCACCAACAGTCCTTAGTTTTGTGCTGTGCACTGGCCTCTCGGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCTCTCCCAGCATCAGGTaGAATCTGGGGTTGTCTCGC +
Preference number: 5 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFSPSIR*NLGLSR
Trigger: GCGAGACAACCCCAGATTCAACCTGATGCTGGGAGA...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAAAGAATGCCTTCACCTTaGGCACCGGCTGATGACTTT +
Preference number: 5 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCERMPSP*APADDF
Trigger: AAAGTCATCAGCCGGTGCCAAAGGTGAAGGCATTCT...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCCTCTCTCATGCTTATTaGATGCTTACAGGTTCAGGG +
Preference number: 5 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSLSHAY*MLTGSG
Trigger: CCCTGAACCTGTAAGCATCAAATAAGCATGAGAGAG...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAACCCGCCCACCTAGACTaGCCAGGGACCCAGAACCCT +
Preference number: 5 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKPAHLD*PGTQNP
Trigger: AGGGTTCTGGGTCCCTGGCAAGTCTAGGTGGGCGGG...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAATCAGTGTTGAGAACCTaGGTACTAAAGGCTCTTGCA +
Preference number: 5 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQSVLRT*VLKALA
Trigger: TGCAAGAGCCTTTAGTACCAAGGTTCTCAACACTGA...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp TTTGCCGAGAGGCCAGTGCACAGCACAAAACTAAGGACTGTTGGTGCATGCTTGAAGGCCCTACATGGTTaGCAAAGCCTAGCAGATTTA +
Preference number: 5 (lower is better)
Translates to: FAERPVHSTKLRTVGACLKALHG*QSLADL
Trigger: TAAATCTGCTAGGCTTTGCAAACCATGTAGGGCCTT...CAAGCATGCACCAACAGTCCTTAGTTTTGTGCTGTGCACTGGCCTCTCGGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGTGGATCCATGTCTGCTaGCACCCTGCACCCTGCACC +
Preference number: 5 (lower is better)
Translates to: IHMDTKMATRDTKDDKREWIHVC*HPAPCT
Trigger: GGTGCAGGGTGCAGGGTGCAAGCAGACATGGATCCA...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAATATAGCCCCTTGATATaGGACTTCTCATCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQYSPLI*DFSSSR
Trigger: TCTGGAGGATGAGAAGTCCAATATCAAGGGGCTATA...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAAGGGGTTCATTTTCCTTaGCCTTCAGGGACTGCTATG +
Preference number: 5 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCEGVHFP*PSGTAM
Trigger: CATAGCAGTCCCTGAAGGCAAAGGAAAATGAACCCC...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCTGTTACAAAGGTATATaGGGTGATGCTGAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSCYKGI*GDAEVW
Trigger: CCAGACCTCAGCATCACCCAATATACCTTTGTAACA...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp GTGGAAGCAGCCACAGAAGGCAGGCCAGCCATACAAAGGAAAGATGTCCAAAGCATTGTCTTGGCCTCCTaGTCGAAAATCAGTTCACTA +
Preference number: 5 (lower is better)
Translates to: VEAATEGRPAIQRKDVQSIVLAS*SKISSL
Trigger: TAGTGAACTGATTTTCGACAAGGAGGCCAAGACAAT...GCTTTGGACATCTTTCCTTTGTATGGCTGGCCTGCCTTCTGTGGCTGCTTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS GCA 90 bp TGCCTTCACCTTTGGCACCGGCTGATGACTTTGCAATCCAAACGTTaGCCTCTCCATCCTCTTTCTTTCTGTTATAAGAGGCGAGAAAGA +
Preference number: 5 (lower is better)
Translates to: CLHLWHRLMTLQSKR*PLHPLSFCYKRRER
Trigger: TCTTTCTCGCCTCTTATAACAGAAAGAAAGAGGATGGAGAGGGCAACGTTTGGATTGCAAAGTCATCAGCCGGTGCCAAAGGTGAAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCGCAGCATATGCTGTTTaGGGGCCCAACCCGCACAAA +
Preference number: 5 (lower is better)
Translates to: KAEILDQDCVQLVDQFGAAAYAV*GPNPHK
Trigger: TTTGTGCGGGTTGGGCCCCAAAACAGCATATGCTGC...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAAAACACAAATGACATCTaGTTCTCCCTACTGCTAGTG +
Preference number: 5 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQNTNDI*FSLLLV
Trigger: CACTAGCAGTAGGGAGAACAAGATGTCATTTGTGTT...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp TTTGCCGAGAGGCCAGTGCACAGCACAAAACTAAGGACTGTTGGTGCATGCTTGCTACTATGTATTGCATaGGAGAGGGGTTCATTTTCC +
Preference number: 5 (lower is better)
Translates to: FAERPVHSTKLRTVGACLLLCIA*ERGSFS
Trigger: GGAAAATGAACCCCTCTCCAATGCAATACATAGTAG...CAAGCATGCACCAACAGTCCTTAGTTTTGTGCTGTGCACTGGCCTCTCGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp ATCTCACTCCCATCTCAGAATTTCCCAAACACCAACCCATCGGCTGCGTTGGGCCAATATAAAATGTCCTaGGCATACAAGTGGCCAAGA +
Preference number: 5 (lower is better)
Translates to: ISLPSQNFPNTNPSAALGQYKMS*AYKWPR
Trigger: TCTTGGCCACTTGTATGCCAAGGACATTTTATATTG...GCCCAACGCAGCCGATGGGTTGGTGTTTGGGAAATTCTGAGATGGGAGTGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp GTGGAAGCAGCCACAGAAGGCAGGCCAGCCATACAAAGGAAAGATGTCCAAAGCATGTTCCATGTGCACTaGAGAAGGATGTGTATTTTG +
Preference number: 5 (lower is better)
Translates to: VEAATEGRPAIQRKDVQSMFHVH*RRMCIL
Trigger: CAAAATACACATCCTTCTCAAGTGCACATGGAACAT...GCTTTGGACATCTTTCCTTTGTATGGCTGGCCTGCCTTCTGTGGCTGCTTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAACAGGGTTTTACCATGTaGGCCAAGCTGGTCTTGAAT +
Preference number: 5 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCEQGFTM*AKLVLN
Trigger: ATTCAAGACCAGCTTGGCCAACATGGTAAAACCCTG...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp CCGCGACTGGCCTCTTCCCAACTTTATGTCCATGTGTACCCAATGTTTAGCTCCGCACATCCTCCAACTTaGTTCTTCTTTCTCCAGATT +
Preference number: 5 (lower is better)
Translates to: PRLASSQLYVHVYPMFSSAHPPT*FFFLQI
Trigger: AATCTGGAGAAAGAAGAACAAAGTTGGAGGATGTGC...GGAGCTAAACATTGGGTACACATGGACATAAAGTTGGGAAGAGGCCAGTCGCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCTTGCACAGGCTGGTCTaGAACTTCCGGCCTCTAGTG +
Preference number: 5 (lower is better)
Translates to: KAEILDQDCVQLVDQFGALHRLV*NFRPLV
Trigger: CACTAGAGGCCGGAAGTTCAAGACCAGCCTGTGCAA...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS TCA 90 bp AAATCCAGCAACTTTACACTGCAGCTCTTCATTCCTCCAACGATTTaGGTTTTACACAGCCCCCTCCCAAAGGCTCTGTCTATGGAAGCT +
Preference number: 5 (lower is better)
Translates to: KSSNFTLQLFIPPTI*VLHSPLPKALSMEA
Trigger: AGCTTCCATAGACAGAGCCTTTGGGAGGGGGCTGTGTAAAACTCAAATCGTTGGAGGAATGAAGAGCTGCAGTGTAAAGTTGCTGGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485537.1
CDS-3UTR CAA 90 bp AAACCACCACTACCCAGTATCCTCCTGCCCCTGATAGTCCCTCCTTACTGTCAATCTACCATTTTACTGTaGGTTTCTTTAGGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: KPPLPSILLPLIVPPYCQSTILL*VSLGLL
Trigger: CAAGAGGCCTAAAGAAACCAACAGTAAAATGGTAGA...TTGACAGTAAGGAGGGACTATCAGGGGCAGGAGGATACTGGGTAGTGGTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS CCA 90 bp CAACGATTTGAGTTTTACACAGCCCCCTCCCAAAGGCTCTGTCTATaGAAGCTCATAAATGACCAGTCAATTCCAAATGGCCCGTATTCA +
Preference number: 5 (lower is better)
Translates to: QRFEFYTAPSQRLCL*KLINDQSIPNGPYS
Trigger: TGAATACGGGCCATTTGGAATTGACTGGTCATTTATGAGCTTCCATAGACAGAGCCTTTGGGAGGGGGCTGTGTAAAACTCAAATCGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485537.1
CDS-3UTR CAA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCTTTGCAATCCAAACGTaGCCCTCTCCATCCTCTTTC +
Preference number: 5 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFFAIQT*PSPSSF
Trigger: GAAAGAGGATGGAGAGGGCAACGTTTGGATTGCAAA...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp TTTGCCGAGAGGCCAGTGCACAGCACAAAACTAAGGACTGTTGGTGCATGCTTGACTTCCCGTAGTTCTTaGAATACTCTTTTTGAATGC +
Preference number: 5 (lower is better)
Translates to: FAERPVHSTKLRTVGACLTSRSS*NTLFEC
Trigger: GCATTCAAAAAGAGTATTCAAAGAACTACGGGAAGT...CAAGCATGCACCAACAGTCCTTAGTTTTGTGCTGTGCACTGGCCTCTCGGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGCGATGGGCTGGGACTTaGGCAGCTGAAATAGTCTCA +
Preference number: 5 (lower is better)
Translates to: IHMDTKMATRDTKDDKRERWAGT*AAEIVS
Trigger: TGAGACTATTTCAGCTGCCAAAGTCCCAGCCCATCG...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp TTTGCCGAGAGGCCAGTGCACAGCACAAAACTAAGGACTGTTGGTGCATGCTTGCCTATTATGTGTATGTaGGTATGTTTGATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: FAERPVHSTKLRTVGACLPIMCM*VCLMVS
Trigger: AGACACCATCAAACATACCAACATACACATAATAGG...CAAGCATGCACCAACAGTCCTTAGTTTTGTGCTGTGCACTGGCCTCTCGGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCTGTATTTTGCTGCTGTaGGGTGGAGTGCCTTGTAGA +
Preference number: 5 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFCILLL*GGVPCR
Trigger: TCTACAAGGCACTCCACCCAACAGCAGCAAAATACA...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCCCAGATTTAATCATGTaGCCCAGGCTGGACTCAAAC +
Preference number: 5 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFPDLIM*PRLDSN
Trigger: GTTTGAGTCCAGCCTGGGCAACATGATTAAATCTGG...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp TTTGCCGAGAGGCCAGTGCACAGCACAAAACTAAGGACTGTTGGTGCATGCTTGTCTTGCTGGTGTCCTTaGAAGCAAAACGTTTTAATT +
Preference number: 5 (lower is better)
Translates to: FAERPVHSTKLRTVGACLSCWCP*KQNVLI
Trigger: AATTAAAACGTTTTGCTTCAAAGGACACCAGCAAGA...CAAGCATGCACCAACAGTCCTTAGTTTTGTGCTGTGCACTGGCCTCTCGGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS TCA 90 bp TTACACAGCCCCCTCCCAAAGGCTCTGTCTATGGAAGCTCATAAATaGCCAGTCAATTCCAAATGGCCCGTATTCAGTTTTTACCCATTT +
Preference number: 5 (lower is better)
Translates to: LHSPLPKALSMEAHK*PVNSKWPVFSFYPF
Trigger: AAATGGGTAAAAACTGAATACGGGCCATTTGGAATTGACTGGTCATTTATGAGCTTCCATAGACAGAGCCTTTGGGAGGGGGCTGTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485537.1
CDS-3UTR CAA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCGGCAGACTTGCCACTTaGTTTCTAAAACATGCAGAG +
Preference number: 5 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFGRLAT*FLKHAE
Trigger: CTCTGCATGTTTTAGAAACAAAGTGGCAAGTCTGCC...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCTCTTCCTACTGTCACTaGTCCTCATCAAAAGCCCTT +
Preference number: 5 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFSSYCH*SSSKAL
Trigger: AAGGGCTTTTGATGAGGACAAGTGACAGTAGGAAGA...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAAAGTCTTCCAAAGGCTTaGGGCCTGTCCACTCTCAGG +
Preference number: 5 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKSLPKA*GLSTLR
Trigger: CCTGAGAGTGGACAGGCCCAAAGCCTTTGGAAGACT...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAAACAGAAAACCAAATATaGCACAGTCTCATAAGTGGG +
Preference number: 5 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCETENQI*HSLISG
Trigger: CCCACTTATGAGACTGTGCAATATTTGGTTTTCTGT...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAAGGACACTCTTCTCAATaGAGGAGTATTTTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCEGHSSQ*RSIFFS
Trigger: AGAGAAGAAAATACTCCTCAATTGAGAAGAGTGTCC...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGAGGTTCAAGCGATTCTaGTGCCTCAGCCATCAGAGT +
Preference number: 5 (lower is better)
Translates to: IHMDTKMATRDTKDDKRERFKRF*CLSHQS
Trigger: ACTCTGATGGCTGAGGCACAAGAATCGCTTGAACCT...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATTTAGCCAGGATGGTCTaGATCTCCGGACCTCATGAT +
Preference number: 5 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNLARMV*ISGPHD
Trigger: ATCATGAGGTCCGGAGATCAAGACCATCCTGGCTAA...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGCTGTTGGCTTATGTATaGGGTAACATCCTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: IHMDTKMATRDTKDDKRELLAYV*GNILGS
Trigger: TGACCCCAGGATGTTACCCAATACATAAGCCAACAG...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCAGGGACTGCTATGGTTaGAATGTGTTCCCCAAAGTA +
Preference number: 5 (lower is better)
Translates to: KAEILDQDCVQLVDQFGARDCYG*NVFPKV
Trigger: TACTTTGGGGAACACATTCAAACCATAGCAGTCCCT...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp CTGCCCATGCAATCTCTGCTGAGTCCACTGGGAATGTGTCATAGTGTATGTGAAATTACAGGCCTTTTCTaGAATAAATGGATTGCTGCA +
Preference number: 5 (lower is better)
Translates to: LPMQSLLSPLGMCHSVCEITGLF*NKWIAA
Trigger: TGCAGCAATCCATTTATTCAAGAAAAGGCCTGTAAT...TTCACATACACTATGACACATTCCCAGTGGACTCAGCAGAGATTGCATGGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAACACCCAGGGAAAAGGTaGTTCACACTGGGTAACCTC +
Preference number: 5 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKHPGKR*FTLGNL
Trigger: GAGGTTACCCAGTGTGAACAACCTTTTCCCTGGGTG...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCCTACTCCACTTCTCTTaGAGTTACTGTTTGCATGGT +
Preference number: 5 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFLLHFS*SYCLHG
Trigger: ACCATGCAAACAGTAACTCAAAGAGAAGTGGAGTAG...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp AGACCTAGGAGTAGGGACTTACATGGAACTACCAAAAAGGCCAAATGGCAATTCAGTTCAGGGCTTGTCTaGATTAGCTTCACTAAAGAA +
Preference number: 5 (lower is better)
Translates to: RPRSRDLHGTTKKAKWQFSSGLV*ISFTKE
Trigger: TTCTTTAGTGAAGCTAATCAAGACAAGCCCTGAACT...GAATTGCCATTTGGCCTTTTTGGTAGTTCCATGTAAGTCCCTACTCCTAGGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATTCTTCCATCTCATCTTaGCGAGTTGCCTTTCTTTCC +
Preference number: 5 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNSSISS*RVAFLS
Trigger: GGAAAGAAAGGCAACTCGCAAAGATGAGATGGAAGA...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGGAGGGTTTTCAGAGGTaGTTACTCTATTATGCCCAC +
Preference number: 5 (lower is better)
Translates to: IHMDTKMATRDTKDDKREEGFQR*LLYYAH
Trigger: GTGGGCATAATAGAGTAACAACCTCTGAAAACCCTC...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGCTCACAAAGCTGCCTTaGTGTACCAAAGTTGTTTTC +
Preference number: 5 (lower is better)
Translates to: IHMDTKMATRDTKDDKRELTKLP*CTKVVF
Trigger: GAAAACAACTTTGGTACACAAAGGCAGCTTTGTGAG...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGTTCTGCTACTATGTATaGCATTGGAGAGGGGTTCAT +
Preference number: 5 (lower is better)
Translates to: IHMDTKMATRDTKDDKREFCYYV*HWRGVH
Trigger: ATGAACCCCTCTCCAATGCAATACATAGTAGCAGAA...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATTTGCTAGTGTTCTCATaGCTTTTATGGAAGAGAGGG +
Preference number: 5 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNLLVFS*LLWKRG
Trigger: CCCTCTCTTCCATAAAAGCAATGAGAACACTAGCAA...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAACTCTGTCCTCTCTGTTaGTGCAGACACTTAAGGTCA +
Preference number: 5 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKLCPLC*CRHLRS
Trigger: TGACCTTAAGTGTCTGCACAAACAGAGAGGACAGAG...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCATGTTTACTGCAGCCTaGTTTGCAATAGCCAAGATT +
Preference number: 5 (lower is better)
Translates to: KAEILDQDCVQLVDQFGAMFTAA*FAIAKI
Trigger: AATCTTGGCTATTGCAAACAAGGCTGCAGTAAACAT...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAAGCATCTCAAGGCATATaGCTGTCTGAGGTTCTGATT +
Preference number: 5 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKASQGI*LSEVLI
Trigger: AATCAGAACCTCAGACAGCAATATGCCTTGAGATGC...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCAAGCATTCAGCCTTATaGCACAAGAAGTTACAAGTT +
Preference number: 5 (lower is better)
Translates to: KAEILDQDCVQLVDQFGAKHSAL*HKKLQV
Trigger: AACTTGTAACTTCTTGTGCAATAAGGCTGAATGCTT...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp GATGGGGTTTCCATCACCTCAAGCATTCATCATTTCTGTCATGAACATTCCAATAGGAATGTAAATTGGTaGAACCACTGTGGAAAGAAG +
Preference number: 5 (lower is better)
Translates to: DGVSITSSIHHFCHEHSNRNVNW*NHCGKK
Trigger: CTTCTTTCCACAGTGGTTCAACCAATTTACATTCCT...ATTGGAATGTTCATGACAGAAATGATGAATGCTTGAGGTGATGGAAACCCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp AAGGCTGAGATTCTTGATCAGGATTGTGTTCAATTGGTAGATCAATTTGGGGCCCTCAGTTCTATTCTCTaGATCTGTATGTCTATCTAC +
Preference number: 5 (lower is better)
Translates to: KAEILDQDCVQLVDQFGALSSIL*ICMSIY
Trigger: GTAGATAGACATACAGATCAAGAGAATAGAACTGAG...GGCCCCAAATTGATCTACCAATTGAACACAATCCTGATCAAGAATCTCAGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS TCA 90 bp CAAATGGCAGGTTTTGTCTTGGAAATTATCAACATGATATGGTTCTaGAGCAGTCCGAAGCACACCCTCTCTATAGAGGTAGATATTATA +
Preference number: 5 (lower is better)
Translates to: QMAGFVLEIINMIWF*SSPKHTLSIEVDII
Trigger: TATAATATCTACCTCTATAGAGAGGGTGTGCTTCGGACTGCTTCAGAACCATATCATGTTGATAATTTCCAAGACAAAACCTGCCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233336.7
ENST00000476615.1
CDS-3UTR CAA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAATTCACTAAAGAAGCTTaGCGACACAGTTTGTCAGCA +
Preference number: 5 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKFTKEA*RHSLSA
Trigger: TGCTGACAAACTGTGTCGCAAAGCTTCTTTAGTGAA...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGATTCCCAAGAGATTATaGGTCTGCTATTTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: IHMDTKMATRDTKDDKREIPKRL*VCYLLF
Trigger: GAAAAGCAAATAGCAGACCAATAATCTCTTGGGAAT...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGAAAGAGTGTTGTGTATaGCCAAATGCTTTTTCAGTG +
Preference number: 5 (lower is better)
Translates to: IHMDTKMATRDTKDDKREKECCV*PNAFSV
Trigger: CACTGAAAAAGCATTTGGCAATACACAACACTCTTT...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp ATACACATGGACACAAAAATGGCAACAAGAGACACTAAAGATGACAAGAGGGAGTGCAAGGGTTTATTTTaGACTCTCAGTTCTATTCTC +
Preference number: 5 (lower is better)
Translates to: IHMDTKMATRDTKDDKRECKGLF*TLSSIL
Trigger: GAGAATAGAACTGAGAGTCAAAAATAAACCCTTGCA...CTCCCTCTTGTCATCTTTAGTGTCTCTTGTTGCCATTTTTGTGTCCATGTGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAATTGAAGGACAATCTGTaGGCTTATGTATTGGGTAAC +
Preference number: 5 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKLKDNL*AYVLGN
Trigger: GTTACCCAATACATAAGCCAACAGATTGTCCTTCAA...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAAATATGGAGGGATGCTTaGGGGAAAACACTTCTAAAA +
Preference number: 5 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKIWRDA*GKTLLK
Trigger: TTTTAGAAGTGTTTTCCCCAAAGCATCCCTCCATAT...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS TCA 90 bp TCCTTCCATGGAGTCACCATTCTACATCATAAACTTGTATACCAATaGAAAGTTGTCCCAGGTACTATTCAAAAGAAGAAAATCCAGCAA +
Preference number: 5 (lower is better)
Translates to: SFHGVTILHHKLVYQ*KVVPGTIQKKKIQQ
Trigger: TTGCTGGATTTTCTTCTTTTGAATAGTACCTGGGACAACTTTTCATTGGTATACAAGTTTATGATGTAGAATGGTGACTCCATGGAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485537.1
CDS-3UTR CAA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAAGTCAAATGGCAGGTTTaGTCTTGGAAATTATCAACA +
Preference number: 5 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKVKWQV*SWKLST
Trigger: TGTTGATAATTTCCAAGACAAAACCTGCCATTTGAC...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAATTCCTTCTAAGTCTTTaGGTCAGTTTGTTTGTTCCA +
Preference number: 5 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKFLLSL*VSLFVP
Trigger: TGGAACAAACAAACTGACCAAAAGACTTAGAAGGAA...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS-3UTR CAA 90 bp TCTGTTATGGCAATACAAAATAGACTAAGATATGGAGGGATGCTTTGGGGAAAATTCCAAGAAAGAGTGTaGTGTATTGCCAAATGCTTT +
Preference number: 5 (lower is better)
Translates to: SVMAIQNRLRYGGMLWGKFQERV*CIAKCF
Trigger: AAAGCATTTGGCAATACACAACACTCTTTCTTGGAA...TTTTCCCCAAAGCATCCCTCCATATCTTAGTCTATTTTGTATTGCCATAACAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS CCA 90 bp CATACTTCCCGTAGTTCTTTGAATACTCTTTTTGAATGCAGTGATTaGTCAAATGGCAGGTTTTGTCTTGGAAATTATCAACATGATATG +
Preference number: 5 (lower is better)
Translates to: HTSRSSLNTLFECSD*SNGRFCLGNYQHDM
Trigger: CATATCATGTTGATAATTTCCAAGACAAAACCTGCCATTTGACCAATCACTGCATTCAAAAAGAGTATTCAAAGAACTACGGGAAGTATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000233336.7
ENST00000476615.1
CDS CCA 72 bp TTGAATCTGGGGTTGTCTCGCCGCAGCCTCTTCCAGTaGCCGGTGGCGAGGAGCAGCCGGGAGACCTCGGCG +
Preference number: 6 (lower is better)
Translates to: LNLGLSRRSLFQ*PVARSSRETSA
Trigger: CGCCGAGGTCTCCCGGCTGCTCCTCGCCACCGGCCACTGGAAGAGGCTGCGGCGAGACAACCCCAGATTCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233336.7
ENST00000485537.1
CDS GCA 72 bp TGGCGAGGAGCAGCCGGGAGACCTCGGCGTAGACGCTaGTGTTCTCATCGCGTACCACGAAGGTGTACATGG +
Preference number: 6 (lower is better)
Translates to: WRGAAGRPRRRR*CSHRVPRRCTW
Trigger: CCATGTACACCTTCGTGGTACGCGATGAGAACAGCAGCGTCTACGCCGAGGTCTCCCGGCTGCTCCTCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000233336.7
ENST00000485537.1
CDS CAA 72 bp CGATTCCTCTCTCCCAGCATCAGGTTGAATCTGGGGTaGTCTCGCCGCAGCCTCTTCCAGTGGCCGGTGGCG +
Preference number: 6 (lower is better)
Translates to: RFLSPSIRLNLG*SRRSLFQWPVA
Trigger: CGCCACCGGCCACTGGAAGAGGCTGCGGCGAGACAACCCCAGATTCAACCTGATGCTGGGAGAGAGGAATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233336.7
ENST00000485537.1
CDS CCA 72 bp AGGGAGTGCCCTCTGTCACAGCTTGATGAAGGCAGCTaGCTGGGTCTGAGGTTGCTCCACATCTGGGGGTGG +
Preference number: 6 (lower is better)
Translates to: RECPLSQLDEGS*LGLRLLHIWGW
Trigger: CCACCCCCAGATGTGGAGCAACCTCAGACCCAGCCAGCTGCCTTCATCAAGCTGTGACAGAGGGCACTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233336.7
ENST00000460450.1
CDS CAA 72 bp CCGAAGGGCAGCCGATTCCTCTCTCCCAGCATCAGGTaGAATCTGGGGTTGTCTCGCCGCAGCCTCTTCCAG +
Preference number: 6 (lower is better)
Translates to: PKGSRFLSPSIR*NLGLSRRSLFQ
Trigger: CTGGAAGAGGCTGCGGCGAGACAACCCCAGATTCAACCTGATGCTGGGAGAGAGGAATCGGCTGCCCTTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233336.7
ENST00000485537.1
CDS CAA 72 bp GCCATGACAGGAGAGCAGCTCAGCAAGTGCTGTCGGTaGCCTCGAATGCTGCTGACAGGTCCAAGGGGGTGG +
Preference number: 6 (lower is better)
Translates to: AMTGEQLSKCCR*PRMLLTGPRGW
Trigger: CCACCCCCTTGGACCTGTCAGCAGCATTCGAGGCAACCGACAGCACTTGCTGAGCTGCTCTCCTGTCATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460450.1
CDS TCA 72 bp AGCTCAGCAAGTGCTGTCGGTTGCCTCGAATGCTGCTaGCAGGTCCAAGGGGGTGGGGACAGAAAGAGGCTG +
Preference number: 6 (lower is better)
Translates to: SSASAVGCLECC*QVQGGGDRKRL
Trigger: CAGCCTCTTTCTGTCCCCACCCCCTTGGACCTGTCAGCAGCATTCGAGGCAACCGACAGCACTTGCTGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460450.1
CDS CAA 90 bp ACGTGTCCAGCCATGACAGGAGAGCAGCTCAGCAAGTGCTGTCGGTaGCCTCGAATGCTGCTGACAGGTCCAAGGGGGTGGGGACAGAAA +
Preference number: 6 (lower is better)
Translates to: TCPAMTGEQLSKCCR*PRMLLTGPRGWGQK
Trigger: TTTCTGTCCCCACCCCCTTGGACCTGTCAGCAGCATTCGAGGCAACCGACAGCACTTGCTGAGCTGCTCTCCTGTCATGGCTGGACACGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460450.1
CDS GCA 72 bp ACGTGTCCAGCCATGACAGGAGAGCAGCTCAGCAAGTaGTGTCGGTTGCCTCGAATGCTGCTGACAGGTCCA +
Preference number: 6 (lower is better)
Translates to: TCPAMTGEQLSK*CRLPRMLLTGP
Trigger: TGGACCTGTCAGCAGCATTCGAGGCAACCGACAGCACTTGCTGAGCTGCTCTCCTGTCATGGCTGGACACGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460450.1
CDS CAA 90 bp TGCCCTCTGTCACAGCTTGATGAAGGCAGCTGGCTGGGTCTGAGGTaGCTCCACATCTGGGGGTGGGAAGACACTGGAAATGGCTATGTC +
Preference number: 6 (lower is better)
Translates to: CPLSQLDEGSWLGLR*LHIWGWEDTGNGYV
Trigger: GACATAGCCATTTCCAGTGTCTTCCCACCCCCAGATGTGGAGCAACCTCAGACCCAGCCAGCTGCCTTCATCAAGCTGTGACAGAGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233336.7
ENST00000460450.1
CDS GCA 72 bp TCCAGTCATTTCACCATTCCCTGGAGCAGGACCCCGTaGTTTTTCCAAGGCAGCAGGGAGTGCCCTCTGTCA +
Preference number: 6 (lower is better)
Translates to: SSHFTIPWSRTP*FFQGSRECPLS
Trigger: TGACAGAGGGCACTCCCTGCTGCCTTGGAAAAAGCACGGGGTCCTGCTCCAGGGAATGGTGAAATGACTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000233336.7
ENST00000460450.1
CDS CCA 72 bp TGTGGGTATGGTGGTGCCCAGCCAGCTTCAACCATGTaGATGAAGGTAATTCCCTCGGGGAGAGCAGGGAAG +
Preference number: 6 (lower is better)
Translates to: CGYGGAQPASTM*MKVIPSGRAGK
Trigger: CTTCCCTGCTCTCCCCGAGGGAATTACCTTCATCCACATGGTTGAAGCTGGCTGGGCACCACCATACCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485537.1
CDS CCA 72 bp TCCTGCGCTTTCCTACCCGTGGACATGTGGGTATGGTaGTGCCCAGCCAGCTTCAACCATGTGGATGAAGGT +
Preference number: 6 (lower is better)
Translates to: SCAFLPVDMWVW*CPASFNHVDEG
Trigger: ACCTTCATCCACATGGTTGAAGCTGGCTGGGCACCACCATACCCACATGTCCACGGGTAGGAAAGCGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485537.1
CDS CCA 72 bp ATCTCCTGCGCTTTCCTACCCGTGGACATGTGGGTATaGTGGTGCCCAGCCAGCTTCAACCATGTGGATGAA +
Preference number: 6 (lower is better)
Translates to: ISCAFLPVDMWV*WCPASFNHVDE
Trigger: TTCATCCACATGGTTGAAGCTGGCTGGGCACCACCATACCCACATGTCCACGGGTAGGAAAGCGCAGGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485537.1
CDS GCA 72 bp TGCGCTTTCCTACCCGTGGACATGTGGGTATGGTGGTaGCCAGCCAGCTTCAACCATGTGGATGAAGGTAAT +
Preference number: 6 (lower is better)
Translates to: CAFLPVDMWVWW*PASFNHVDEGN
Trigger: ATTACCTTCATCCACATGGTTGAAGCTGGCTGGGCACCACCATACCCACATGTCCACGGGTAGGAAAGCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485537.1
CDS GCA 72 bp AATTCTGGCAAGGAACATGGCTCCCCGGAGAGAAGATaGAATTCCCAGATGACTGTGCAGAGAGGGAGGCCA +
Preference number: 6 (lower is better)
Translates to: NSGKEHGSPERR*NSQMTVQRGRP
Trigger: TGGCCTCCCTCTCTGCACAGTCATCTGGGAATTGCATCTTCTCTCCGGGGAGCCATGTTCCTTGCCAGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485537.1
CDS CCA 72 bp GTTGCTCCACATCTGGGGGTGGGAAGACACTGGAAATaGCTATGTCCACGATGCCTTGGCACAGTTCTGCAT +
Preference number: 6 (lower is better)
Translates to: VAPHLGVGRHWK*LCPRCLGTVLH
Trigger: ATGCAGAACTGTGCCAAGGCATCGTGGACATAGCCATTTCCAGTGTCTTCCCACCCCCAGATGTGGAGCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233336.7
ENST00000460450.1
CDS CCA 72 bp TCTGAGGTTGCTCCACATCTGGGGGTGGGAAGACACTaGAAATGGCTATGTCCACGATGCCTTGGCACAGTT +
Preference number: 6 (lower is better)
Translates to: SEVAPHLGVGRH*KWLCPRCLGTV
Trigger: AACTGTGCCAAGGCATCGTGGACATAGCCATTTCCAGTGTCTTCCCACCCCCAGATGTGGAGCAACCTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233336.7
ENST00000460450.1
CDS CAA 72 bp GGACAGAAAGAGGCTGCTGGAGGTGGCAATAAGGACTaGGCTGGGGACCTGCAAAGAACAGTTTCTGTGAGG +
Preference number: 6 (lower is better)
Translates to: GQKEAAGGGNKD*AGDLQRTVSVR
Trigger: CCTCACAGAAACTGTTCTTTGCAGGTCCCCAGCCAAGTCCTTATTGCCACCTCCAGCAGCCTCTTTCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460450.1
CDS CAA 90 bp GCCCTCCAAGGTAGAGGTGACTCTTCCTCCGTATCGATTCTCCCCTaGTCTTTGGAATACAATTGGCCCCCACCTCTGGTGAATTCTGGC +
Preference number: 6 (lower is better)
Translates to: ALQGRGDSSSVSILP*SLEYNWPPPLVNSG
Trigger: GCCAGAATTCACCAGAGGTGGGGGCCAATTGTATTCCAAAGACAAGGGGAGAATCGATACGGAGGAAGAGTCACCTCTACCTTGGAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485537.1
CDS CCA 72 bp GACCTGCAAAGAACAGTTTCTGTGAGGCAATCAGGATaGGAGCCAGCCTGGAATGGACTGGAACATGGATGG +
Preference number: 6 (lower is better)
Translates to: DLQRTVSVRQSG*EPAWNGLEHGW
Trigger: CCATCCATGTTCCAGTCCATTCCAGGCTGGCTCCCATCCTGATTGCCTCACAGAAACTGTTCTTTGCAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460450.1
CDS CAA 72 bp GGTAGAGGTGACTCTTCCTCCGTATCGATTCTCCCCTaGTCTTTGGAATACAATTGGCCCCCACCTCTGGTG +
Preference number: 6 (lower is better)
Translates to: GRGDSSSVSILP*SLEYNWPPPLV
Trigger: CACCAGAGGTGGGGGCCAATTGTATTCCAAAGACAAGGGGAGAATCGATACGGAGGAAGAGTCACCTCTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485537.1
CDS CAA 90 bp ATCTGGGGGTGGGAAGACACTGGAAATGGCTATGTCCACGATGCCTaGGCACAGTTCTGCATAGAGCTTCACAGAGAGGAGACAAACACC +
Preference number: 6 (lower is better)
Translates to: IWGWEDTGNGYVHDA*AQFCIELHREETNT
Trigger: GGTGTTTGTCTCCTCTCTGTGAAGCTCTATGCAGAACTGTGCCAAGGCATCGTGGACATAGCCATTTCCAGTGTCTTCCCACCCCCAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460450.1
CDS CAA 90 bp CAGAGGAATAGAAGACAGCTTGTGCAGAAGCTGCTCTCCAGAAGCTaGGCTGTGAAGGGAACTGGAGAAGGCGTGATCATTGGAACAGGA +
Preference number: 6 (lower is better)
Translates to: QRNRRQLVQKLLSRS*AVKGTGEGVIIGTG
Trigger: TCCTGTTCCAATGATCACGCCTTCTCCAGTTCCCTTCACAGCCAAGCTTCTGGAGAGCAGCTTCTGCACAAGCTGTCTTCTATTCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460450.1
CDS CCA 72 bp ACAGTTTCTGTGAGGCAATCAGGATGGGAGCCAGCCTaGAATGGACTGGAACATGGATGGGAACAGAGGAAT +
Preference number: 6 (lower is better)
Translates to: TVSVRQSGWEPA*NGLEHGWEQRN
Trigger: ATTCCTCTGTTCCCATCCATGTTCCAGTCCATTCCAGGCTGGCTCCCATCCTGATTGCCTCACAGAAACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460450.1
CDS CCA 72 bp CTGTTTTCTCTCCTGGACATAGAACATTGCTCTCTCTaGGTTGCCCTCCAAGGTAGAGGTGACTCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: LFSLLDIEHCSL*VALQGRGDSSS
Trigger: GGAGGAAGAGTCACCTCTACCTTGGAGGGCAACCCAGAGAGAGCAATGTTCTATGTCCAGGAGAGAAAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485537.1
CDS CAA 72 bp AGAAGACAGCTTGTGCAGAAGCTGCTCTCCAGAAGCTaGGCTGTGAAGGGAACTGGAGAAGGCGTGATCATT +
Preference number: 6 (lower is better)
Translates to: RRQLVQKLLSRS*AVKGTGEGVII
Trigger: AATGATCACGCCTTCTCCAGTTCCCTTCACAGCCAAGCTTCTGGAGAGCAGCTTCTGCACAAGCTGTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460450.1
CDS CAA 72 bp CTCCGTATCGATTCTCCCCTTGTCTTTGGAATACAATaGGCCCCCACCTCTGGTGAATTCTGGCAAGGAACA +
Preference number: 6 (lower is better)
Translates to: LRIDSPLVFGIQ*APTSGEFWQGT
Trigger: TGTTCCTTGCCAGAATTCACCAGAGGTGGGGGCCAATTGTATTCCAAAGACAAGGGGAGAATCGATACGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485537.1
CDS CAA 72 bp GGCCATGAGACTATGCTCAGGTCAATAGGATGTGAGTaGAACCGATCTGGGCAACTTCTGGATGACATCACT +
Preference number: 6 (lower is better)
Translates to: GHETMLRSIGCE*NRSGQLLDDIT
Trigger: AGTGATGTCATCCAGAAGTTGCCCAGATCGGTTCAACTCACATCCTATTGACCTGAGCATAGTCTCATGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485537.1
CDS CAA 72 bp CAACTTTACACTGCAGCTCTTCATTCCTCCAACGATTaGAGTTTTACACAGCCCCCTCCCAAAGGCTCTGTC +
Preference number: 6 (lower is better)
Translates to: QLYTAALHSSND*SFTQPPPKGSV
Trigger: GACAGAGCCTTTGGGAGGGGGCTGTGTAAAACTCAAATCGTTGGAGGAATGAAGAGCTGCAGTGTAAAGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485537.1
CDS TCA 72 bp AACTTTACACTGCAGCTCTTCATTCCTCCAACGATTTaGGTTTTACACAGCCCCCTCCCAAAGGCTCTGTCT +
Preference number: 6 (lower is better)
Translates to: NFTLQLFIPPTI*VLHSPLPKALS
Trigger: AGACAGAGCCTTTGGGAGGGGGCTGTGTAAAACTCAAATCGTTGGAGGAATGAAGAGCTGCAGTGTAAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485537.1
CDS GCA 72 bp CTTTGGCACCGGCTGATGACTTTGCAATCCAAACGTTaGCCTCTCCATCCTCTTTCTTTCTGTTATAAGAGG +
Preference number: 6 (lower is better)
Translates to: LWHRLMTLQSKR*PLHPLSFCYKR
Trigger: CCTCTTATAACAGAAAGAAAGAGGATGGAGAGGGCAACGTTTGGATTGCAAAGTCATCAGCCGGTGCCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS TCA 72 bp CGAGAAAGAATTCTCTTTCATCTGTCCTTGAGTTACTaGTTGGTGGCTGAATTCCATTCTGTGCTGGAGCAA +
Preference number: 6 (lower is better)
Translates to: RERILFHLSLSY*LVAEFHSVLEQ
Trigger: TTGCTCCAGCACAGAATGGAATTCAGCCACCAATCAGTAACTCAAGGACAGATGAAAGAGAATTCTTTCTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233336.7
CDS TCA 72 bp GGTTTTGTCTTGGAAATTATCAACATGATATGGTTCTaGAGCAGTCCGAAGCACACCCTCTCTATAGAGGTA +
Preference number: 6 (lower is better)
Translates to: GFVLEIINMIWF*SSPKHTLSIEV
Trigger: TACCTCTATAGAGAGGGTGTGCTTCGGACTGCTTCAGAACCATATCATGTTGATAATTTCCAAGACAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233336.7
ENST00000476615.1
CDS CAA 90 bp GTTCAAATGGGTCCTTCCATGGAGTCACCATTCTACATCATAAACTaGTATACCAATGAAAAGTTGTCCCAGGTACTATTCAAAAGAAGA +
Preference number: 6 (lower is better)
Translates to: VQMGPSMESPFYIIN*YTNEKLSQVLFKRR
Trigger: TCTTCTTTTGAATAGTACCTGGGACAACTTTTCATTGGTATACAAGTTTATGATGTAGAATGGTGACTCCATGGAAGGACCCATTTGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485537.1
CDS TCA 72 bp GGAGTCACCATTCTACATCATAAACTTGTATACCAATaGAAAGTTGTCCCAGGTACTATTCAAAAGAAGAAA +
Preference number: 6 (lower is better)
Translates to: GVTILHHKLVYQ*KVVPGTIQKKK
Trigger: TTTCTTCTTTTGAATAGTACCTGGGACAACTTTTCATTGGTATACAAGTTTATGATGTAGAATGGTGACTCC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485537.1