RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTK (Homo sapiens)

Ensembl gene IDs: ENSG00000112742

Ensembl transcript IDs: ENST00000230510.7, ENST00000369798.7, ENST00000502580.5, ENST00000504590.1, ENST00000509313.5, ENST00000509894.5, ENST00000515751.1

Found 253 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACACCGCGACCCCACCCGTaGGGCGCCTGGGTTGGTAGG +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITPRPHP*GAWVGR
Trigger: CCTACCAACCCAGGCGCCGCACGGGTGGGGTCGCGG...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR TCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAGGGCCGGCCCTTTACTaGCCCCACCGCCACCCTTCT +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVGPALY*PHRHPS
Trigger: AGAAGGGTGGCGGTGGGGTCAGTAAAGGGCCGGCCC...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR TCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTGGGCCGGCCCTTTACTaGCCCCACCGCCACCCTTCT +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSGPALY*PHRHPS
Trigger: AGAAGGGTGGCGGTGGGGTCAGTAAAGGGCCGGCCC...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR CCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTCACCCGTGCGGCGCCTaGGTTGGTAGGGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSHPCGA*VGRVLA
Trigger: TGCCAGCACCCTACCAACCCAGGCGCCGCACGGGTG...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR CCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTACACCCGTGCGGCGCCTaGGTTGGTAGGGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVHPCGA*VGRVLA
Trigger: TGCCAGCACCCTACCAACCCAGGCGCCGCACGGGTG...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR GCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAAGGGTGCTGGCACTTTaGAGGCGTTCCCCGGACGCC +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVRVLAL*RRSPDA
Trigger: GGCGTCCGGGGAACGCCTGCAAAGTGCCAGCACCCT...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR CCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTTTCCCCGGACGCCCGTaGGCGGGCTTTCCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSFPGRP*AGFPGL
Trigger: AAGACCAGGAAAGCCCGCCCACGGGCGTCCGGGGAA...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR GCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAAGGGTGCTGGCACTTTaGAGGCGTTCCCCGGACGCC +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITRVLAL*RRSPDA
Trigger: GGCGTCCGGGGAACGCCTGCAAAGTGCCAGCACCCT...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR GCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACACGTGATTGGTTCTTGTaGGACGGGGGCCGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITRDWFL*DGGRPS
Trigger: GGAGGGGCGGCCCCCGTCGCACAAGAACCAATCACG...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR TCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTACGTGATTGCCCTGTCTaGAGTCGCCTTATCGGCCCC +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVRDCPV*SRLIGP
Trigger: GGGGCCGATAAGGCGACTTCAGACAGGGCAATCACG...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509894.5
CDS-3UTR CCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTGGGTTGGTAGGGTGCTaGCACTTTGCAGGCGTTCCC +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSGLVGC*HFAGVP
Trigger: GGGAACGCCTGCAAAGTGCCAGCACCCTACCAACCC...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR CCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAGGGTTGGTAGGGTGCTaGCACTTTGCAGGCGTTCCC +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVGLVGC*HFAGVP
Trigger: GGGAACGCCTGCAAAGTGCCAGCACCCTACCAACCC...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR GCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTCCTGGGTTGGTAGGGTaGTGGCACTTTGCAGGCGTT +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSPGLVG*WHFAGV
Trigger: AACGCCTGCAAAGTGCCAGCACCCTACCAACCCAGG...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR GCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTACCTGGGTTGGTAGGGTaGTGGCACTTTGCAGGCGTT +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVPGLVG*WHFAGV
Trigger: AACGCCTGCAAAGTGCCAGCACCCTACCAACCCAGG...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR CCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAGCGACAGTCGTGATTaGTTCTTGTGCGACGGGGGC +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSSDSRD*FLCDGG
Trigger: GCCCCCGTCGCACAAGAACCAATCACGACTGTCGCT...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR TCA 90 bp AACTCTCATTTTGGCCATATTTATCTGGGGGAAGCGCTTCAATTGCTTGACTGTGCTGCGCTGGGGAAATaGAAAGATGGAACCCAAACT +
Preference number: 4 (lower is better)
Translates to: NSHFGHIYLGEALQLLDCAALGK*KDGTQT
Trigger: AGTTTGGGTTCCATCTTTTCATTTCCCCAGCGCAGC...ACAGTCAAGCAATTGAAGCGCTTCCCCCAGATAAATATGGCCAAAATGAGAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509313.5
CDS-3UTR TCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACACTCAAGCGCCCATCGTaGTTGCCCTGTCTGAAGTCG +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITLKRPS*LPCLKS
Trigger: CGACTTCAGACAGGGCAATCACGATGGGCGCTTGAG...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509894.5
CDS-3UTR GCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAACCAGGCCGAATTTTTaGCTGGGAGGTAGCCACTCC +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVTRPNF*LGGSHS
Trigger: GGAGTGGCTACCTCCCAGGCAAAAATTCGGCCTGGT...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR GCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTACCAGGCCGAATTTTTaGCTGGGAGGTAGCCACTCC +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSTRPNF*LGGSHS
Trigger: GGAGTGGCTACCTCCCAGGCAAAAATTCGGCCTGGT...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR CCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAGGCCGAATTTTTGCCTaGGAGGTAGCCACTCCCGAG +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITGRIFA*EVATPE
Trigger: CTCGGGAGTGGCTACCTCCCAGGCAAAAATTCGGCC...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR TCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTGAAAGGATCTTTCACTaGGCTACGTTCAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSERIFH*ATFSPA
Trigger: GGCAGGGCTGAACGTAGCTCAGTGAAAGATCCTTTC...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR TCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAGCAAACCTACCCAGTaGGAGGAATATAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSSKPTQ*EEYRGR
Trigger: CCTGCCCCTATATTCCTCTCACTGGGTAGGTTTGCT...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR GCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTTCAGGACCTAAAAGATaGACCTTGGGCCGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSSGPKR*TLGRPF
Trigger: AAAGGGCCGGCCCAAGGTGCATCTTTTAGGTCCTGA...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR GCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAAATAATCTTCGCGGGTaGGAGGCTCTGCCGCTAAGT +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVNNLRG*EALPLS
Trigger: ACTTAGCGGCAGAGCCTCGCACCCGCGAAGATTATT...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509894.5
CDS-3UTR CCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTACTAAAAGATGCACCTTaGGCCGGCCCTTTACTGACC +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVLKDAP*AGPLLT
Trigger: GGTCAGTAAAGGGCCGGCCCAAGGTGCATCTTTTAG...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR TCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAGAAAGGATCTTTCACTaGGCTACGTTCAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITERIFH*ATFSPA
Trigger: GGCAGGGCTGAACGTAGCTCAGTGAAAGATCCTTTC...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR TCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAGCTGCGCTGGGGAAATaGAAAGATGGAACCCAAACT +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVAALGK*KDGTQT
Trigger: AGTTTGGGTTCCATCTTTTCATTTCCCCAGCGCAGC...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTGCTGCGCTGGGGAAATaGAAAGATGGAACCCAAACT +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSAALGK*KDGTQT
Trigger: AGTTTGGGTTCCATCTTTTCATTTCCCCAGCGCAGC...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATCCGGAATCTGCCAGTaGTTTGAAGATGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVSGICQ*FEDAAG
Trigger: TCCTGCTGCATCTTCAAATCACTGGCAGATTCCGGA...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTTCCGGAATCTGCCAGTaGTTTGAAGATGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSSGICQ*FEDAAG
Trigger: TCCTGCTGCATCTTCAAATCACTGGCAGATTCCGGA...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTTTGGCCATAAGGTGTTaGCAACTGACAAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSLAIRC*QLTSRW
Trigger: CCACCTGCTTGTCAGTTGTCAACACCTTATGGCCAA...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAAGCTACGTTCAGCCCTaGCGCCAGCTCAAGAATTTC +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITSYVQP*RQLKNF
Trigger: GAAATTCTTGAGCTGGCGGCAGGGCTGAACGTAGCT...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR GCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACATCAGGACCTAAAAGATaGACCTTGGGCCGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITSGPKR*TLGRPF
Trigger: AAAGGGCCGGCCCAAGGTGCATCTTTTAGGTCCTGA...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR GCA 90 bp AACTCTCATTTTGGCCATATTTATCTGGGGGAAGCGCTTCAATTGCTTGACTGTGGGAAGCGCTTCAATTaGTTGACTGTAACGACCAAT +
Preference number: 4 (lower is better)
Translates to: NSHFGHIYLGEALQLLDCGKRFN*LTVTTN
Trigger: ATTGGTCGTTACAGTCAAGCAATTGAAGCGCTTCCC...ACAGTCAAGCAATTGAAGCGCTTCCCCCAGATAAATATGGCCAAAATGAGAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509313.5
CDS-3UTR CCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACACTAAAAGATGCACCTTaGGCCGGCCCTTTACTGACC +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITLKDAP*AGPLLT
Trigger: GGTCAGTAAAGGGCCGGCCCAAGGTGCATCTTTTAG...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR CCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAGTGGGCGGGCTTTCCTaGTCTTTCCAGTTTAACCAG +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITVGGLS*SFQFNQ
Trigger: CTGGTTAAACTGGAAAGACCAGGAAAGCCCGCCCAC...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR CCA 90 bp AACTCTCATTTTGGCCATATTTATCTGGGGGAAGCGCTTCAATTGCTTGACTGTTTGGCCATATTTATCTaGGGGAAGCGCTTCAATTGC +
Preference number: 4 (lower is better)
Translates to: NSHFGHIYLGEALQLLDCLAIFI*GKRFNC
Trigger: GCAATTGAAGCGCTTCCCCCAGATAAATATGGCCAA...ACAGTCAAGCAATTGAAGCGCTTCCCCCAGATAAATATGGCCAAAATGAGAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509313.5
CDS-3UTR TCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTTTCCGCAAACACGTTTaGATTTCCCCGTCGCTATCA +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSFRKHV*ISPSLS
Trigger: TGATAGCGACGGGGAAATTCAAACGTGTTTGCGGAA...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR TCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATTCCGCAAACACGTTTaGATTTCCCCGTCGCTATCA +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVFRKHV*ISPSLS
Trigger: TGATAGCGACGGGGAAATTCAAACGTGTTTGCGGAA...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR TCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAGCTGCGCTGGGGAAATaGAAAGATGGAACCCAAACT +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITAALGK*KDGTQT
Trigger: AGTTTGGGTTCCATCTTTTCATTTCCCCAGCGCAGC...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACATCCGGAATCTGCCAGTaGTTTGAAGATGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITSGICQ*FEDAAG
Trigger: TCCTGCTGCATCTTCAAATCACTGGCAGATTCCGGA...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACATTGGCCATAAGGTGTTaGCAACTGACAAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITLAIRC*QLTSRW
Trigger: CCACCTGCTTGTCAGTTGTCAACACCTTATGGCCAA...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp AACTCTCATTTTGGCCATATTTATCTGGGGGAAGCGCTTCAATTGCTTGACTGTTCCCGAGTTATCATGTaGCAGACACCATTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: NSHFGHIYLGEALQLLDCSRVIM*QTPFKV
Trigger: AACTTTGAATGGTGTCTGGCACATGATAACTCGGGA...ACAGTCAAGCAATTGAAGCGCTTCCCCCAGATAAATATGGCCAAAATGAGAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509313.5
CDS-3UTR GCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACACCCTTGTCAAAATTCTaGGCAGAACTCAAGCGCCCA +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITPLSKF*AELKRP
Trigger: TGGGCGCTTGAGTTCTGCGCAGAATTTTGACAAGGG...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509894.5
CDS-3UTR CCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTACCAGGAGCTCAGGAATaGATATCCTCTGTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVPGAQE*ISSVLG
Trigger: ACCCAAAACAGAGGATATCCATTCCTGAGCTCCTGG...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTCCAGGAGCTCAGGAATaGATATCCTCTGTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSPGAQE*ISSVLG
Trigger: ACCCAAAACAGAGGATATCCATTCCTGAGCTCCTGG...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp AACTCTCATTTTGGCCATATTTATCTGGGGGAAGCGCTTCAATTGCTTGACTGTGCATCATCTGGCTCTTaGATAGCTTTTAATTCAGCA +
Preference number: 4 (lower is better)
Translates to: NSHFGHIYLGEALQLLDCASSGS*IAFNSA
Trigger: TGCTGAATTAAAAGCTATTCAAGAGCCAGATGATGC...ACAGTCAAGCAATTGAAGCGCTTCCCCCAGATAAATATGGCCAAAATGAGAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509313.5
CDS-3UTR TCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAAATCTGCCAGTGATTTaGAGATGCAGCAGGATTCTG +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVNLPVI*RCSRIL
Trigger: CAGAATCCTGCTGCATCTTCAAATCACTGGCAGATT...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAATCTGCCAGTGATTTaGAGATGCAGCAGGATTCTG +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSNLPVI*RCSRIL
Trigger: CAGAATCCTGCTGCATCTTCAAATCACTGGCAGATT...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAGGAGTGGCAAGTATTTaGTGCTGTTGCTGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITGVASI*CCCCWK
Trigger: TTTCCAGCAGCAACAGCATCAAATACTTGCCACTCC...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTACTGAAATACCTTGCTTaGACCTCCACTTCCTATCTG +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVLKYLA*TSTSYL
Trigger: CAGATAGGAAGTGGAGGTTCAAGCAAGGTATTTCAG...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTCTGAAATACCTTGCTTaGACCTCCACTTCCTATCTG +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSLKYLA*TSTSYL
Trigger: CAGATAGGAAGTGGAGGTTCAAGCAAGGTATTTCAG...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp AACTCTCATTTTGGCCATATTTATCTGGGGGAAGCGCTTCAATTGCTTGACTGTGTCCTCTGGGTTGTTTaGCATCATCATAATTTGGTT +
Preference number: 4 (lower is better)
Translates to: NSHFGHIYLGEALQLLDCVLWVV*HHHNLV
Trigger: AACCAAATTATGATGATGGCAAACAACCCAGAGGAC...ACAGTCAAGCAATTGAAGCGCTTCCCCCAGATAAATATGGCCAAAATGAGAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509313.5
CDS-3UTR GCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTGGGAAGCGCTTCAATTaGTTGACTGTAACGACCAAT +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSGKRFN*LTVTTN
Trigger: ATTGGTCGTTACAGTCAAGCAATTGAAGCGCTTCCC...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTACCGGTAACCTATTTCTaGATCTTGTGGTGGCATGTT +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVPVTYF*ILWWHV
Trigger: AACATGCCACCACAAGATGCAGAAATAGGTTACCGG...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp AACTCTCATTTTGGCCATATTTATCTGGGGGAAGCGCTTCAATTGCTTGACTGTATTTCTACAGAAAGCTaGGCTGGGGAAATGAAAAGA +
Preference number: 4 (lower is better)
Translates to: NSHFGHIYLGEALQLLDCISTES*AGEMKR
Trigger: TCTTTTCATTTCCCCAGCGCAGCTTTCTGTAGAAAT...ACAGTCAAGCAATTGAAGCGCTTCCCCCAGATAAATATGGCCAAAATGAGAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000509313.5
CDS-3UTR CCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTGGCTTAGAGAGGATGTaGCAAGAAAGGATCTTTCAC +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSGLERM*QERIFH
Trigger: GTGAAAGATCCTTTCTTGCCACATCCTCTCTAAGCC...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR CCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATTGGCCATATTTATCTaGGGGAAGCGCTTCAATTGC +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVLAIFI*GKRFNC
Trigger: GCAATTGAAGCGCTTCCCCCAGATAAATATGGCCAA...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTTTGGCCATATTTATCTaGGGGAAGCGCTTCAATTGC +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSLAIFI*GKRFNC
Trigger: GCAATTGAAGCGCTTCCCCCAGATAAATATGGCCAA...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAGATTGCCACTGTTTCTaGTTACTCTCTGGAACCTCT +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVDCHCF*LLSGTS
Trigger: AGAGGTTCCAGAGAGTAACCAGAAACAGTGGCAATC...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACACCAGGAGCTCAGGAATaGATATCCTCTGTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITPGAQE*ISSVLG
Trigger: ACCCAAAACAGAGGATATCCATTCCTGAGCTCCTGG...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp AACTCTCATTTTGGCCATATTTATCTGGGGGAAGCGCTTCAATTGCTTGACTGTTCAGCAAATCTCACTTaGATTCTAGCAAAACTCTCA +
Preference number: 4 (lower is better)
Translates to: NSHFGHIYLGEALQLLDCSANLT*ILAKLS
Trigger: TGAGAGTTTTGCTAGAATTCAAGTGAGATTTGCTGA...ACAGTCAAGCAATTGAAGCGCTTCCCCCAGATAAATATGGCCAAAATGAGAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509313.5
CDS-3UTR TCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAAATCTGCCAGTGATTTaGAGATGCAGCAGGATTCTG +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITNLPVI*RCSRIL
Trigger: CAGAATCCTGCTGCATCTTCAAATCACTGGCAGATT...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTTCCATTATCCTTAAATaGCTCCACGCTCTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSSIILK*LHALSS
Trigger: TGAAGACAGAGCGTGGAGTCATTTAAGGATAATGGA...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509894.5
CDS-3UTR GCA 90 bp AACTCTCATTTTGGCCATATTTATCTGGGGGAAGCGCTTCAATTGCTTGACTGTCAATTGTCAATTCTCTaGCACTTAAATCCTCGGATT +
Preference number: 4 (lower is better)
Translates to: NSHFGHIYLGEALQLLDCQLSIL*HLNPRI
Trigger: AATCCGAGGATTTAAGTGGCAGAGAATTGACAATTG...ACAGTCAAGCAATTGAAGCGCTTCCCCCAGATAAATATGGCCAAAATGAGAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509313.5
CDS-3UTR GCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAGGGAAGCGCTTCAATTaGTTGACTGTAACGACCAAT +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITGKRFN*LTVTTN
Trigger: ATTGGTCGTTACAGTCAAGCAATTGAAGCGCTTCCC...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACACCGGTAACCTATTTCTaGATCTTGTGGTGGCATGTT +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITPVTYF*ILWWHV
Trigger: AACATGCCACCACAAGATGCAGAAATAGGTTACCGG...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTACACCTGAAATACCTTaGTTGAACCTCCACTTCCTA +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSTPEIP*LNLHFL
Trigger: TAGGAAGTGGAGGTTCAAGCAAGGTATTTCAGGTGT...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATTTTCCAGTAACTCTTaGGTTCCCATGGATCAATGG +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVFSSNS*VPMDQW
Trigger: CCATTGATCCATGGGAACGCAAGAGTTACTGGAAAA...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CCA 90 bp AACTCTCATTTTGGCCATATTTATCTGGGGGAAGCGCTTCAATTGCTTGACTGTGCCATCATCATAATTTaGTTAACAGTTCCCGAGTTA +
Preference number: 4 (lower is better)
Translates to: NSHFGHIYLGEALQLLDCAIIII*LTVPEL
Trigger: TAACTCGGGAACTGTTAACCAAATTATGATGATGGC...ACAGTCAAGCAATTGAAGCGCTTCCCCCAGATAAATATGGCCAAAATGAGAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509313.5
CDS-3UTR CCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATCTTGCAGTTTGCTCTaGCCATTTGAAAGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVSCSLL*PFESSH
Trigger: GTGACTACTTTCAAATGGCCAGAGCAAACTGCAAGA...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTTCTTGCAGTTTGCTCTaGCCATTTGAAAGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSSCSLL*PFESSH
Trigger: GTGACTACTTTCAAATGGCCAGAGCAAACTGCAAGA...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAGATTGCCACTGTTTCTaGTTACTCTCTGGAACCTCT +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITDCHCF*LLSGTS
Trigger: AGAGGTTCCAGAGAGTAACCAGAAACAGTGGCAATC...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATTGAATTTGAACATATaGATGAGCCAGGAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVLNLNI*MSQELR
Trigger: CCTGAGCTCCTGGCTCATCCATATGTTCAAATTCAA...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTGCATCATCTGGCTCTTaGATAGCTTTTAATTCAGCA +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSASSGS*IAFNSA
Trigger: TGCTGAATTAAAAGCTATTCAAGAGCCAGATGATGC...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAACACCAGAGGTTCCTTaGAATGACTATTTTGAACAG +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVTPEVP*NDYFEQ
Trigger: CTGTTCAAAATAGTCATTTCAAGGAACCTCTGGTGT...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTGGAACCTCTGGTTCTTaGTACTCTTTAGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSGTSGS*YSLVSS
Trigger: AGAAGAAACTAAAGAGTATCAAGAACCAGAGGTTCC...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAGGAACCTCTGGTTCTTaGTACTCTTTAGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVGTSGS*YSLVSS
Trigger: AGAAGAAACTAAAGAGTATCAAGAACCAGAGGTTCC...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAAGGAAGACATATCTTTaGTTGCTTCTGGTGGCATAT +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVRKTYL*LLLVAY
Trigger: ATATGCCACCAGAAGCAATCAAAGATATGTCTTCCT...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAGGAAGACATATCTTTaGTTGCTTCTGGTGGCATAT +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSRKTYL*LLLVAY
Trigger: ATATGCCACCAGAAGCAATCAAAGATATGTCTTCCT...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATTTGGGGCTTATCTTTaGCTTAGATTTCCCATTCTC +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVFGAYL*LRFPIL
Trigger: GAGAATGGGAAATCTAAGTCAAAGATAAGCCCCAAA...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTGTCCTCTGGGTTGTTTaGCATCATCATAATTTGGTT +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSVLWVV*HHHNLV
Trigger: AACCAAATTATGATGATGGCAAACAACCCAGAGGAC...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTTTGAAAGTAGTCACGTaGATCATCTGGCTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSLKVVT*IIWLLN
Trigger: ATTCAAGAGCCAGATGATGCACGTGACTACTTTCAA...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTGACTTTCTCTTAGATTaGCACTGTTTCTGGTTACTC +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSDFLLD*HCFWLL
Trigger: GAGTAACCAGAAACAGTGGCAATCTAAGAGAAAGTC...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAGACTTTCTCTTAGATTaGCACTGTTTCTGGTTACTC +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVDFLLD*HCFWLL
Trigger: GAGTAACCAGAAACAGTGGCAATCTAAGAGAAAGTC...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAACACCTGAAATACCTTaGTTGAACCTCCACTTCCTA +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITTPEIP*LNLHFL
Trigger: TAGGAAGTGGAGGTTCAAGCAAGGTATTTCAGGTGT...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACATTTTCCAGTAACTCTTaGGTTCCCATGGATCAATGG +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITFSSNS*VPMDQW
Trigger: CCATTGATCCATGGGAACGCAAGAGTTACTGGAAAA...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTGATCACTGTGAACAATaGCATGTTGATGGATTGTGT +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSDHCEQ*HVDGLC
Trigger: ACACAATCCATCAACATGGCATTGTTCACAGTGATC...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAGATCACTGTGAACAATaGCATGTTGATGGATTGTGT +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVDHCEQ*HVDGLC
Trigger: ACACAATCCATCAACATGGCATTGTTCACAGTGATC...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTACTTGTTGTATCTGGTTaGATTTGGTTTGCAATCCCA +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVLVVSG*IWFAIP
Trigger: TGGGATTGCAAACCAAATGCAACCAGATACAACAAG...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTTTATCCTTGAGCTTCTaGTTATGCCCTTCCATTATC +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSLSLSF*LCPSII
Trigger: GATAATGGAAGGGCATAAGCAGAAGCTCAAGGATAA...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509894.5
CDS-3UTR CCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACATCTTGCAGTTTGCTCTaGCCATTTGAAAGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITSCSLL*PFESSH
Trigger: GTGACTACTTTCAAATGGCCAGAGCAAACTGCAAGA...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTACTCTCTGGAACCTCTaGTTCTTGATACTCTTTAGT +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSTLWNL*FLILFS
Trigger: ACTAAAGAGTATCAAGAACCAGAGGTTCCAGAGAGT...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACATTGAATTTGAACATATaGATGAGCCAGGAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITLNLNI*MSQELR
Trigger: CCTGAGCTCCTGGCTCATCCATATGTTCAAATTCAA...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAATTTCATTTCTTCAGTaGTTCCCTTGGCCATTTGGT +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVISFLQ*FPWPFG
Trigger: ACCAAATGGCCAAGGGAACCACTGAAGAAATGAAAT...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAGCATCATCTGGCTCTTaGATAGCTTTTAATTCAGCA +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITASSGS*IAFNSA
Trigger: TGCTGAATTAAAAGCTATTCAAGAGCCAGATGATGC...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTGTTAGTTTGTCTCAATaGATTCCGGTAACCTATTTC +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSVSLSQ*IPVTYF
Trigger: GAAATAGGTTACCGGAATTCATTGAGACAAACTAAC...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATCTTCCAAATGGGCATaGCTGTTTAGTTTTGTTAGT +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVSSKWA*LFSFVS
Trigger: ACTAACAAAACTAAACAGTCATGCCCATTTGGAAGA...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAAAACAAGGTACAACTaGATCATCTGTCTTCACATC +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSKTRYN*IICLHI
Trigger: GATGTGAAGACAGATGATTCAGTTGTACCTTGTTTT...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAACACCAGAGGTTCCTTaGAATGACTATTTTGAACAG +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITTPEVP*NDYFEQ
Trigger: CTGTTCAAAATAGTCATTTCAAGGAACCTCTGGTGT...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAGGAACCTCTGGTTCTTaGTACTCTTTAGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITGTSGS*YSLVSS
Trigger: AGAAGAAACTAAAGAGTATCAAGAACCAGAGGTTCC...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTTTAACTGTGCCAACCTaGGAATCTTTAACAACACTT +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSLTVPT*ESLTTL
Trigger: AAGTGTTGTTAAAGATTCTCAGGTTGGCACAGTTAA...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAAGGAAGACATATCTTTaGTTGCTTCTGGTGGCATAT +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITRKTYL*LLLVAY
Trigger: ATATGCCACCAGAAGCAATCAAAGATATGTCTTCCT...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTCAATTGTCAATTCTCTaGCACTTAAATCCTCGGATT +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSQLSIL*HLNPRI
Trigger: AATCCGAGGATTTAAGTGGCAGAGAATTGACAATTG...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAGTCCTCTGGGTTGTTTaGCATCATCATAATTTGGTT +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITVLWVV*HHHNLV
Trigger: AACCAAATTATGATGATGGCAAACAACCCAGAGGAC...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACATTGAAAGTAGTCACGTaGATCATCTGGCTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITLKVVT*IIWLLN
Trigger: ATTCAAGAGCCAGATGATGCACGTGACTACTTTCAA...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATTCCTATTCTGTAAATaGCCAAGTGAACCGGAAAAT +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVFLFCK*PSEPEN
Trigger: ATTTTCCGGTTCACTTGGGCATTTACAGAATAGGAA...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTTTCCTATTCTGTAAATaGCCAAGTGAACCGGAAAAT +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSFLFCK*PSEPEN
Trigger: ATTTTCCGGTTCACTTGGGCATTTACAGAATAGGAA...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAACTGAAAAGACAGGTTaGTCAAAAGTGGTATGTTTC +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVTEKTG*SKVVCF
Trigger: GAAACATACCACTTTTGAGCAACCTGTCTTTTCAGT...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAAATCATCCAAGGTATTaGTGCTTGGTGTCTTACAAA +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVNHPRY*CLVSYK
Trigger: TTTGTAAGACACCAAGCAGCAATACCTTGGATGATT...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAGATCACTGTGAACAATaGCATGTTGATGGATTGTGT +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITDHCEQ*HVDGLC
Trigger: ACACAATCCATCAACATGGCATTGTTCACAGTGATC...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACACTTGTTGTATCTGGTTaGATTTGGTTTGCAATCCCA +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITLVVSG*IWFAIP
Trigger: TGGGATTGCAAACCAAATGCAACCAGATACAACAAG...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAATTTCTACAGAAAGCTaGGCTGGGGAAATGAAAAGA +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITISTES*AGEMKR
Trigger: TCTTTTCATTTCCCCAGCGCAGCTTTCTGTAGAAAT...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTTTGAGCTTCTGCTTATaGCCTTCCATTATCCTTAAA +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSLSFCL*PSIILK
Trigger: TTTAAGGATAATGGAAGGGCATAAGCAGAAGCTCAA...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509894.5
CDS-3UTR CCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAGCCATCATCATAATTTaGTTAACAGTTCCCGAGTTA +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVAIIII*LTVPEL
Trigger: TAACTCGGGAACTGTTAACCAAATTATGATGATGGC...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAACTCTCTGGAACCTCTaGTTCTTGATACTCTTTAGT +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITTLWNL*FLILFS
Trigger: ACTAAAGAGTATCAAGAACCAGAGGTTCCAGAGAGT...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAGGCCATTTGGTTAACTaGATGAGTTTGAATTTGAAC +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVGHLVN*MSLNLN
Trigger: GTTCAAATTCAAACTCATCCAGTTAACCAAATGGCC...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTGGCCATTTGGTTAACTaGATGAGTTTGAATTTGAAC +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSGHLVN*MSLNLN
Trigger: GTTCAAATTCAAACTCATCCAGTTAACCAAATGGCC...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACACAGGTTGCTCAAAAGTaGTATGTTTCTGCTCTGTAT +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITQVAQK*YVSALY
Trigger: ATACAGAGCAGAAACATACCACTTTTGAGCAACCTG...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369798.7
CDS-3UTR TCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACATCAGCAAATCTCACTTaGATTCTAGCAAAACTCTCA +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITSANLT*ILAKLS
Trigger: TGAGAGTTTTGCTAGAATTCAAGTGAGATTTGCTGA...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAGTTAGTTTGTCTCAATaGATTCCGGTAACCTATTTC +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITVSLSQ*IPVTYF
Trigger: GAAATAGGTTACCGGAATTCATTGAGACAAACTAAC...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACATCTTCCAAATGGGCATaGCTGTTTAGTTTTGTTAGT +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITSSKWA*LFSFVS
Trigger: ACTAACAAAACTAAACAGTCATGCCCATTTGGAAGA...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAAAAACAAGGTACAACTaGATCATCTGTCTTCACATC +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITKTRYN*IICLHI
Trigger: GATGTGAAGACAGATGATTCAGTTGTACCTTGTTTT...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR TCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACATTAACTGTGCCAACCTaGGAATCTTTAACAACACTT +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITLTVPT*ESLTTL
Trigger: AAGTGTTGTTAAAGATTCTCAGGTTGGCACAGTTAA...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACACAATTGTCAATTCTCTaGCACTTAAATCCTCGGATT +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITQLSIL*HLNPRI
Trigger: AATCCGAGGATTTAAGTGGCAGAGAATTGACAATTG...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAACTGAAAAGACAGGTTaGTCAAAAGTGGTATGTTTC +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITTEKTG*SKVVCF
Trigger: GAAACATACCACTTTTGAGCAACCTGTCTTTTCAGT...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAAATCATCCAAGGTATTaGTGCTTGGTGTCTTACAAA +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITNHPRY*CLVSYK
Trigger: TTTGTAAGACACCAAGCAGCAATACCTTGGATGATT...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR GCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAAAAGTGGTATGTTTCTaGTCTGTATTAACTTTTCGG +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVKVVCF*SVLTFR
Trigger: CCGAAAAGTTAATACAGAGCAGAAACATACCACTTT...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369798.7
CDS-3UTR GCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAGCTCAAGAATTTCAGTaGTTTTTATCCTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITAQEFQ*FLSLSF
Trigger: GAAGCTCAAGGATAAAAAGCACTGAAATTCTTGAGC...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509894.5
CDS-3UTR CCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAGCCATCATCATAATTTaGTTAACAGTTCCCGAGTTA +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITAIIII*LTVPEL
Trigger: TAACTCGGGAACTGTTAACCAAATTATGATGATGGC...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTCAAGGTATTGCTGCTTaGTGTCTTACAAATAGATTT +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSQGIAA*CLTNRF
Trigger: AAATCTATTTGTAAGACACCAAGCAGCAATACCTTG...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAGTCATTCTTTACAACTaGAGTTCTAAAACAGCTCAT +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVVILYN*SSKTAH
Trigger: ATGAGCTGTTTTAGAACTCCAGTTGTAAAGAATGAC...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTGTCATTCTTTACAACTaGAGTTCTAAAACAGCTCAT +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSVILYN*SSKTAH
Trigger: ATGAGCTGTTTTAGAACTCCAGTTGTAAAGAATGAC...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAAATTTTGAAGTGGAGTaGCAAGTATTTGATGCTGTT +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVNFEVE*QVFDAV
Trigger: AACAGCATCAAATACTTGCCACTCCACTTCAAAATT...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAAACACTTGTTGTATCTaGTTGCATTTGGTTTGCAAT +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVNTCCI*LHLVCN
Trigger: ATTGCAAACCAAATGCAACCAGATACAACAAGTGTT...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAACACTTGTTGTATCTaGTTGCATTTGGTTTGCAAT +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSNTCCI*LHLVCN
Trigger: ATTGCAAACCAAATGCAACCAGATACAACAAGTGTT...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CCA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAAATTATCTGCTGAAATaGTGTTTTCCCGTAAGTCAT +
Preference number: 4 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVNYLLK*CFPVSH
Trigger: ATGACTTACGGGAAAACACCATTTCAGCAGATAATT...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CCA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAATTATCTGCTGAAATaGTGTTTTCCCGTAAGTCAT +
Preference number: 4 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSNYLLK*CFPVSH
Trigger: ATGACTTACGGGAAAACACCATTTCAGCAGATAATT...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACATTCAGACCAACAAGTTaGCCCAGAACATATTTCATT +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITFRPTS*PRTYFI
Trigger: AATGAAATATGTTCTGGGCCAACTTGTTGGTCTGAA...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACACAAGGTATTGCTGCTTaGTGTCTTACAAATAGATTT +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITQGIAA*CLTNRF
Trigger: AAATCTATTTGTAAGACACCAAGCAGCAATACCTTG...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CCA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAGTCATTCTTTACAACTaGAGTTCTAAAACAGCTCAT +
Preference number: 4 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITVILYN*SSKTAH
Trigger: ATGAGCTGTTTTAGAACTCCAGTTGTAAAGAATGAC...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS GCA 90 bp GCCTGCGGCCGCGACCCCACCCGTGCGGCGCCTGGGTTGGTAGGGTaGTGGCACTTTGCAGGCGTTCCCCGGACGCCCGTGGGCGGGCTT +
Preference number: 5 (lower is better)
Translates to: ACGRDPTRAAPGLVG*WHFAGVPRTPVGGL
Trigger: AAGCCCGCCCACGGGCGTCCGGGGAACGCCTGCAAAGTGCCAGCACCCTACCAACCCAGGCGCCGCACGGGTGGGGTCGCGGCCGCAGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS CCA 90 bp TGCGGCCGCGACCCCACCCGTGCGGCGCCTGGGTTGGTAGGGTGCTaGCACTTTGCAGGCGTTCCCCGGACGCCCGTGGGCGGGCTTTCC +
Preference number: 5 (lower is better)
Translates to: CGRDPTRAAPGLVGC*HFAGVPRTPVGGLS
Trigger: GGAAAGCCCGCCCACGGGCGTCCGGGGAACGCCTGCAAAGTGCCAGCACCCTACCAACCCAGGCGCCGCACGGGTGGGGTCGCGGCCGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS GCA 90 bp AGGCTAGGCCCGCCCCGGAAGAGCCTGCGGCCGCGACCCCACCCGTaGGGCGCCTGGGTTGGTAGGGTGCTGGCACTTTGCAGGCGTTCC +
Preference number: 5 (lower is better)
Translates to: RLGPPRKSLRPRPHP*GAWVGRVLALCRRS
Trigger: GGAACGCCTGCAAAGTGCCAGCACCCTACCAACCCAGGCGCCGCACGGGTGGGGTCGCGGCCGCAGGCTCTTCCGGGGCGGGCCTAGCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS GCA 90 bp CGACCCCACCCGTGCGGCGCCTGGGTTGGTAGGGTGCTGGCACTTTaGAGGCGTTCCCCGGACGCCCGTGGGCGGGCTTTCCTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: RPHPCGAWVGRVLAL*RRSPDARGRAFLVF
Trigger: AAAGACCAGGAAAGCCCGCCCACGGGCGTCCGGGGAACGCCTGCAAAGTGCCAGCACCCTACCAACCCAGGCGCCGCACGGGTGGGGTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS GCA 90 bp CCCACCCCTCACCGACCAGCGCTAACAATGAGCCCCTACACCGGCTaGGGCTGTTCCTCAGTGCGCCGGTGCACCGGTAAGACAGAACTT +
Preference number: 5 (lower is better)
Translates to: PTPHRPALTMSPYTG*GCSSVRRCTGKTEL
Trigger: AAGTTCTGTCTTACCGGTGCACCGGCGCACTGAGGAACAGCCGCAGCCGGTGTAGGGGCTCATTGTTAGCGCTGGTCGGTGAGGGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502580.5
CDS CCA 90 bp CCCCACCGCCACCCTTCTCCTTCGTTTCCCGCGGTTCTCACAGCCTaGCTTAGAGAGGATGTGGCAAGAAAGGATCTTTCACTGAGCTAC +
Preference number: 5 (lower is better)
Translates to: PHRHPSPSFPAVLTA*LREDVARKDLSLSY
Trigger: GTAGCTCAGTGAAAGATCCTTTCTTGCCACATCCTCTCTAAGCCAGGCTGTGAGAACCGCGGGAAACGAAGGAGAAGGGTGGCGGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR CAA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAGTCGTGATTGGTTCTaGTGCGACGGGGGCCGCCCC +
Preference number: 5 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSSRDWF*CDGGRP
Trigger: GGGGCGGCCCCCGTCGCACAAGAACCAATCACGACT...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAAGTCGTGATTGGTTCTaGTGCGACGGGGGCCGCCCC +
Preference number: 5 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVSRDWF*CDGGRP
Trigger: GGGGCGGCCCCCGTCGCACAAGAACCAATCACGACT...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACACGTGCGGCGCCTGGGTaGGTAGGGTGCTGGCACTTT +
Preference number: 5 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITRAAPG*VGCWHF
Trigger: AAAGTGCCAGCACCCTACCAACCCAGGCGCCGCACG...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS TCA 90 bp TTGATGCTGTTGCTGCTGGAAACAGGCAGGTTGGCCATAAGGTGTTaGCAACTGACAAGCAGGTGGAAAGTCATTCTTTACAACTGGAGT +
Preference number: 5 (lower is better)
Translates to: LMLLLLETGRLAIRC*QLTSRWKVILYNWS
Trigger: ACTCCAGTTGTAAAGAATGACTTTCCACCTGCTTGTCAGTTGTCAACACCTTATGGCCAACCTGCCTGTTTCCAGCAGCAACAGCATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTACCTAAAAGATGCACCTaGGGCCGGCCCTTTACTGAC +
Preference number: 5 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVPKRCT*GRPFTD
Trigger: GTCAGTAAAGGGCCGGCCCAAGGTGCATCTTTTAGG...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR CAA 90 bp AACTCTCATTTTGGCCATATTTATCTGGGGGAAGCGCTTCAATTGCTTGACTGTGGGGAAGCGCTTCAATaGCTTGACTGTAACGACCAA +
Preference number: 5 (lower is better)
Translates to: NSHFGHIYLGEALQLLDCGEALQ*LDCNDQ
Trigger: TTGGTCGTTACAGTCAAGCAATTGAAGCGCTTCCCC...ACAGTCAAGCAATTGAAGCGCTTCCCCCAGATAAATATGGCCAAAATGAGAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509313.5
CDS CCA 90 bp TCCCTTGGCCATTTGGTTAACTGGATGAGTTTGAATTTGAACATATaGATGAGCCAGGAGCTCAGGAATGGATATCCTCTGTTTTGGGTC +
Preference number: 5 (lower is better)
Translates to: SLGHLVNWMSLNLNI*MSQELRNGYPLFWV
Trigger: GACCCAAAACAGAGGATATCCATTCCTGAGCTCCTGGCTCATCCATATGTTCAAATTCAAACTCATCCAGTTAACCAAATGGCCAAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACACCTAAAAGATGCACCTaGGGCCGGCCCTTTACTGAC +
Preference number: 5 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITPKRCT*GRPFTD
Trigger: GTCAGTAAAGGGCCGGCCCAAGGTGCATCTTTTAGG...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR CAA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTCACTACGGTCTCCTATaGGTCAATGCTAGCCACGTA +
Preference number: 5 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSHYGLL*VNASHV
Trigger: TACGTGGCTAGCATTGACCAATAGGAGACCGTAGTG...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR CAA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTGGGGAAGCGCTTCAATaGCTTGACTGTAACGACCAA +
Preference number: 5 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSGEALQ*LDCNDQ
Trigger: TTGGTCGTTACAGTCAAGCAATTGAAGCGCTTCCCC...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAGGGGAAGCGCTTCAATaGCTTGACTGTAACGACCAA +
Preference number: 5 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVGEALQ*LDCNDQ
Trigger: TTGGTCGTTACAGTCAAGCAATTGAAGCGCTTCCCC...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAGTTGGCCATAAGGTGTaGACAACTGACAAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVVGHKV*TTDKQV
Trigger: CACCTGCTTGTCAGTTGTCAACACCTTATGGCCAAC...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTGTTGGCCATAAGGTGTaGACAACTGACAAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSVGHKV*TTDKQV
Trigger: CACCTGCTTGTCAGTTGTCAACACCTTATGGCCAAC...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACACCAAGACCCTCCCCCTaGTCAAAATTCTGCGCAGAA +
Preference number: 5 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITPRPSP*SKFCAE
Trigger: TTCTGCGCAGAATTTTGACAAGGGGGAGGGTCTTGG...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509894.5
CDS TCA 90 bp TTCTGCTCTGTATTAACTTTTCGGGCTAACTCCGGAATCTGCCAGTaGTTTGAAGATGCAGCAGGATTCTGGTTAATACACTCTGACTTT +
Preference number: 5 (lower is better)
Translates to: FCSVLTFRANSGICQ*FEDAAGFWLIHSDF
Trigger: AAAGTCAGAGTGTATTAACCAGAATCCTGCTGCATCTTCAAATCACTGGCAGATTCCGGAGTTAGCCCGAAAAGTTAATACAGAGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369798.7
ENST00000515751.1
CDS GCA 90 bp CGAGTTGGGTTCATAATCAGCAAAGTGACTCCTTTCAGAATGCTGTaGTTTTTCTATGATTATACTGGGCAACTAGTAAAGCCTGCCCTA +
Preference number: 5 (lower is better)
Translates to: RVGFIISKVTPFRML*FFYDYTGQLVKPAL
Trigger: TAGGGCAGGCTTTACTAGTTGCCCAGTATAATCATAGAAAAAGCACAGCATTCTGAAAGGAGTCACTTTGCTGATTATGAACCCAACTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504590.1
CDS-3UTR CAA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACACACTACGGTCTCCTATaGGTCAATGCTAGCCACGTA +
Preference number: 5 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITHYGLL*VNASHV
Trigger: TACGTGGCTAGCATTGACCAATAGGAGACCGTAGTG...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATTTCCGCAAACACGTTaGAATTTCCCCGTCGCTATC +
Preference number: 5 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVFPQTR*NFPVAI
Trigger: GATAGCGACGGGGAAATTCAAACGTGTTTGCGGAAA...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR CAA 90 bp AACTCTCATTTTGGCCATATTTATCTGGGGGAAGCGCTTCAATTGCTTGACTGTAACCAGTCCTCTGGGTaGTTTGCCATCATCATAATT +
Preference number: 5 (lower is better)
Translates to: NSHFGHIYLGEALQLLDCNQSSG*FAIIII
Trigger: AATTATGATGATGGCAAACAACCCAGAGGACTGGTT...ACAGTCAAGCAATTGAAGCGCTTCCCCCAGATAAATATGGCCAAAATGAGAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509313.5
CDS-3UTR CAA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAGGGGAAGCGCTTCAATaGCTTGACTGTAACGACCAA +
Preference number: 5 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITGEALQ*LDCNDQ
Trigger: TTGGTCGTTACAGTCAAGCAATTGAAGCGCTTCCCC...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAGTTTGCTCTGGCCATTaGAAAGTAGTCACGTGCATC +
Preference number: 5 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVVCSGH*KVVTCI
Trigger: GATGCACGTGACTACTTTCAAATGGCCAGAGCAAAC...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAAAGTATTTGATGCTGTaGCTGCTGGAAACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVKYLML*LLETGR
Trigger: CCTGCCTGTTTCCAGCAGCAACAGCATCAAATACTT...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTTGGAGTGGCAAGTATTaGATGCTGTTGCTGCTGGAA +
Preference number: 5 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSWSGKY*MLLLLE
Trigger: TTCCAGCAGCAACAGCATCAAATACTTGCCACTCCA...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTGGTTCCCTTGGCCATTaGGTTAACTGGATGAGTTTG +
Preference number: 5 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSGSLGH*VNWMSL
Trigger: CAAACTCATCCAGTTAACCAAATGGCCAAGGGAACC...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATCTTCAGTGGTTCCCTaGGCCATTTGGTTAACTGGA +
Preference number: 5 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVSSVVP*AIWLTG
Trigger: TCCAGTTAACCAAATGGCCAAGGGAACCACTGAAGA...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS TCA 90 bp TGTTTCTCTGTATTAACTTTTCGGGCTAACTCCGGAATCTGCCAGTaGTTTGAAGATGCAGCAGGATTCTGGTTAATACACTCTGACTTT +
Preference number: 5 (lower is better)
Translates to: CFSVLTFRANSGICQ*FEDAAGFWLIHSDF
Trigger: AAAGTCAGAGTGTATTAACCAGAATCCTGCTGCATCTTCAAATCACTGGCAGATTCCGGAGTTAGCCCGAAAAGTTAATACAGAGAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS CCA 90 bp TTAGCAGCTTTCAAAATGGAGTTAGGAGAATTCAGACCAACAAGTTaGCCCAGAACATATTTCATTTCTTCAGTGGTTCCCTTGGCCATT +
Preference number: 5 (lower is better)
Translates to: LAAFKMELGEFRPTS*PRTYFISSVVPLAI
Trigger: AATGGCCAAGGGAACCACTGAAGAAATGAAATATGTTCTGGGCCAACTTGTTGGTCTGAATTCTCCTAACTCCATTTTGAAAGCTGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS CCA 90 bp AGATTTCCCATTCTCTCTGGAGGAAGACATATCTTTGATTGCTTCTaGTGGCATATAATTAACTGTGCCAACCTATATGCCAAGTCAGAG +
Preference number: 5 (lower is better)
Translates to: RFPILSGGRHIFDCF*WHIINCANLYAKSE
Trigger: CTCTGACTTGGCATATAGGTTGGCACAGTTAATTATATGCCACCAGAAGCAATCAAAGATATGTCTTCCTCCAGAGAGAATGGGAAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504590.1
CDS-3UTR CAA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACATTTCCGCAAACACGTTaGAATTTCCCCGTCGCTATC +
Preference number: 5 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITFPQTR*NFPVAI
Trigger: GATAGCGACGGGGAAATTCAAACGTGTTTGCGGAAA...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS-3UTR CAA 90 bp AACTCTCATTTTGGCCATATTTATCTGGGGGAAGCGCTTCAATTGCTTGACTGTTGCCATCATCATAATTaGGTTAACAGTTCCCGAGTT +
Preference number: 5 (lower is better)
Translates to: NSHFGHIYLGEALQLLDCCHHHN*VNSSRV
Trigger: AACTCGGGAACTGTTAACCAAATTATGATGATGGCA...ACAGTCAAGCAATTGAAGCGCTTCCCCCAGATAAATATGGCCAAAATGAGAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509313.5
CDS-3UTR CAA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAGTTTGCTCTGGCCATTaGAAAGTAGTCACGTGCATC +
Preference number: 5 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITVCSGH*KVVTCI
Trigger: GATGCACGTGACTACTTTCAAATGGCCAGAGCAAAC...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAGAATCTGCCAGTGATTaGAAGATGCAGCAGGATTCT +
Preference number: 5 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVESASD*KMQQDS
Trigger: AGAATCCTGCTGCATCTTCAAATCACTGGCAGATTC...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAAAGTATTTGATGCTGTaGCTGCTGGAAACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITKYLML*LLETGR
Trigger: CCTGCCTGTTTCCAGCAGCAACAGCATCAAATACTT...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACATGGAGTGGCAAGTATTaGATGCTGTTGCTGCTGGAA +
Preference number: 5 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITWSGKY*MLLLLE
Trigger: TTCCAGCAGCAACAGCATCAAATACTTGCCACTCCA...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTCCTGAAATACCTTGCTaGAACCTCCACTTCCTATCT +
Preference number: 5 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSPEIPC*NLHFLS
Trigger: AGATAGGAAGTGGAGGTTCAAGCAAGGTATTTCAGG...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTACCTGAAATACCTTGCTaGAACCTCCACTTCCTATCT +
Preference number: 5 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVPEIPC*NLHFLS
Trigger: AGATAGGAAGTGGAGGTTCAAGCAAGGTATTTCAGG...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTTGCCATGTTGATGGATaGTGTGAACTGCCTCTAACA +
Preference number: 5 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSCHVDG*CELPLT
Trigger: TGTTAGAGGCAGTTCACACAATCCATCAACATGGCA...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATGCCATGTTGATGGATaGTGTGAACTGCCTCTAACA +
Preference number: 5 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVCHVDG*CELPLT
Trigger: TGTTAGAGGCAGTTCACACAATCCATCAACATGGCA...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAGTGAACAATGCCATGTaGATGGATTGTGTGAACTGC +
Preference number: 5 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVVNNAM*MDCVNC
Trigger: GCAGTTCACACAATCCATCAACATGGCATTGTTCAC...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTGTGAACAATGCCATGTaGATGGATTGTGTGAACTGC +
Preference number: 5 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSVNNAM*MDCVNC
Trigger: GCAGTTCACACAATCCATCAACATGGCATTGTTCAC...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAGGTTCCCTTGGCCATTaGGTTAACTGGATGAGTTTG +
Preference number: 5 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITGSLGH*VNWMSL
Trigger: CAAACTCATCCAGTTAACCAAATGGCCAAGGGAACC...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACATCTTCAGTGGTTCCCTaGGCCATTTGGTTAACTGGA +
Preference number: 5 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITSSVVP*AIWLTG
Trigger: TCCAGTTAACCAAATGGCCAAGGGAACCACTGAAGA...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTACAGTGCTTTTTATCCTaGAGCTTCTGCTTATGCCCT +
Preference number: 5 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVQCFLS*SFCLCP
Trigger: AGGGCATAAGCAGAAGCTCAAGGATAAAAAGCACTG...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509894.5
CDS-3UTR CAA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAACCAGTCCTCTGGGTaGTTTGCCATCATCATAATT +
Preference number: 5 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSNQSSG*FAIIII
Trigger: AATTATGATGATGGCAAACAACCCAGAGGACTGGTT...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp AACTCTCATTTTGGCCATATTTATCTGGGGGAAGCGCTTCAATTGCTTGACTGTTTCAGCAAATCTCACTaGAATTCTAGCAAAACTCTC +
Preference number: 5 (lower is better)
Translates to: NSHFGHIYLGEALQLLDCFSKSH*NSSKTL
Trigger: GAGAGTTTTGCTAGAATTCAAGTGAGATTTGCTGAA...ACAGTCAAGCAATTGAAGCGCTTCCCCCAGATAAATATGGCCAAAATGAGAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509313.5
CDS-3UTR CAA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAGAATCTGCCAGTGATTaGAAGATGCAGCAGGATTCT +
Preference number: 5 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITESASD*KMQQDS
Trigger: AGAATCCTGCTGCATCTTCAAATCACTGGCAGATTC...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACACCTGAAATACCTTGCTaGAACCTCCACTTCCTATCT +
Preference number: 5 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITPEIPC*NLHFLS
Trigger: AGATAGGAAGTGGAGGTTCAAGCAAGGTATTTCAGG...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAACTTGTTGTATCTGGTaGCATTTGGTTTGCAATCCC +
Preference number: 5 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVTCCIW*HLVCNP
Trigger: GGGATTGCAAACCAAATGCAACCAGATACAACAAGT...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAGAGGAAGACATATCTTaGATTGCTTCTGGTGGCATA +
Preference number: 5 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVEEDIS*IASGGI
Trigger: TATGCCACCAGAAGCAATCAAAGATATGTCTTCCTC...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS CCA 90 bp AGATTTCCCATTCTCTCTGGAGGAAGACATATCTTTGATTGCTTCTaGTGGCATATAATTAACTGTGCCAACCTGAGAATCTTTAACAAC +
Preference number: 5 (lower is better)
Translates to: RFPILSGGRHIFDCF*WHIINCANLRIFNN
Trigger: GTTGTTAAAGATTCTCAGGTTGGCACAGTTAATTATATGCCACCAGAAGCAATCAAAGATATGTCTTCCTCCAGAGAGAATGGGAAATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTTGCCATCATCATAATTaGGTTAACAGTTCCCGAGTT +
Preference number: 5 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSCHHHN*VNSSRV
Trigger: AACTCGGGAACTGTTAACCAAATTATGATGATGGCA...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAAACCAGTCCTCTGGGTaGTTTGCCATCATCATAATT +
Preference number: 5 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITNQSSG*FAIIII
Trigger: AATTATGATGATGGCAAACAACCCAGAGGACTGGTT...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTACAAATTTCTTGCAGTTaGCTCTGGCCATTTGAAAGT +
Preference number: 5 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVQISCS*LWPFES
Trigger: ACTTTCAAATGGCCAGAGCAAACTGCAAGAAATTTG...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTCAAATTTCTTGCAGTTaGCTCTGGCCATTTGAAAGT +
Preference number: 5 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSQISCS*LWPFES
Trigger: ACTTTCAAATGGCCAGAGCAAACTGCAAGAAATTTG...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTCTGGAATCACAACTGTaGTTCCTATTCTGTAAATGC +
Preference number: 5 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSLESQL*FLFCKC
Trigger: GCATTTACAGAATAGGAACAACAGTTGTGATTCCAG...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTACTGGAATCACAACTGTaGTTCCTATTCTGTAAATGC +
Preference number: 5 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVLESQL*FLFCKC
Trigger: GCATTTACAGAATAGGAACAACAGTTGTGATTCCAG...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATGGAACCTCTGGTTCTaGATACTCTTTAGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVWNLWF*ILFSFF
Trigger: GAAGAAACTAAAGAGTATCAAGAACCAGAGGTTCCA...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTTGTATCTGGTTGCATTaGGTTTGCAATCCCAAAATC +
Preference number: 5 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSCIWLH*VCNPKI
Trigger: GATTTTGGGATTGCAAACCAAATGCAACCAGATACA...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATGTATCTGGTTGCATTaGGTTTGCAATCCCAAAATC +
Preference number: 5 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVCIWLH*VCNPKI
Trigger: GATTTTGGGATTGCAAACCAAATGCAACCAGATACA...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAACTTGTTGTATCTGGTaGCATTTGGTTTGCAATCCC +
Preference number: 5 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITTCCIW*HLVCNP
Trigger: GGGATTGCAAACCAAATGCAACCAGATACAACAAGT...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAGAGGAAGACATATCTTaGATTGCTTCTGGTGGCATA +
Preference number: 5 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITEEDIS*IASGGI
Trigger: TATGCCACCAGAAGCAATCAAAGATATGTCTTCCTC...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTGACCAAACATCACTTTaGGGGCTTATCTTTGACTTA +
Preference number: 5 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSDQTSL*GLIFDL
Trigger: TAAGTCAAAGATAAGCCCCAAAAGTGATGTTTGGTC...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATTCAGACCAACAAGTaGGCCCAGAACATATTTCAT +
Preference number: 5 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSIQTNK*AQNIFH
Trigger: ATGAAATATGTTCTGGGCCAACTTGTTGGTCTGAAT...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTAATTCAGACCAACAAGTaGGCCCAGAACATATTTCAT +
Preference number: 5 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVIQTNK*AQNIFH
Trigger: ATGAAATATGTTCTGGGCCAACTTGTTGGTCTGAAT...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACATGCCATCATCATAATTaGGTTAACAGTTCCCGAGTT +
Preference number: 5 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITCHHHN*VNSSRV
Trigger: AACTCGGGAACTGTTAACCAAATTATGATGATGGCA...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTTTCAGCAAATCTCACTaGAATTCTAGCAAAACTCTC +
Preference number: 5 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSFSKSH*NSSKTL
Trigger: GAGAGTTTTGCTAGAATTCAAGTGAGATTTGCTGAA...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACACAAATTTCTTGCAGTTaGCTCTGGCCATTTGAAAGT +
Preference number: 5 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITQISCS*LWPFES
Trigger: ACTTTCAAATGGCCAGAGCAAACTGCAAGAAATTTG...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACATGGAACCTCTGGTTCTaGATACTCTTTAGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITWNLWF*ILFSFF
Trigger: GAAGAAACTAAAGAGTATCAAGAACCAGAGGTTCCA...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTCCGAAATGCATTCATTaGCTGAAGAAGATGCTAAAA +
Preference number: 5 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSPKCIH*LKKMLK
Trigger: TTTTAGCATCTTCTTCAGCAAATGAATGCATTTCGG...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTCTGGTTGCATTTGGTTaGCAATCCCAAAATCAATTA +
Preference number: 5 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSLVAFG*QSQNQL
Trigger: TAATTGATTTTGGGATTGCAAACCAAATGCAACCAG...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACAGACCAAACATCACTTTaGGGGCTTATCTTTGACTTA +
Preference number: 5 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITDQTSL*GLIFDL
Trigger: TAAGTCAAAGATAAGCCCCAAAAGTGATGTTTGGTC...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTCACTTCAGAGTGATGTaGTCTTCAAATGTAGATTTC +
Preference number: 5 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSHFRVM*SSNVDF
Trigger: GAAATCTACATTTGAAGACAACATCACTCTGAAGTG...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTACAGTGCCATAAGTGGTaGCTATTTTTACAGTTTTCT +
Preference number: 5 (lower is better)
Translates to: HFRVMLSSNVDFHRDSRVQCHKW*LFLQFS
Trigger: AGAAAACTGTAAAAATAGCAACCACTTATGGCACTG...TACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp ACACTTCAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTCAGTGCCATAAGTGGTaGCTATTTTTACAGTTTTCT +
Preference number: 5 (lower is better)
Translates to: TLQSDVVFKCRFPQGFKSQCHKW*LFLQFS
Trigger: AGAAAACTGTAAAAATAGCAACCACTTATGGCACTG...ACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTGAAGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACATTCAGCAAATCTCACTaGAATTCTAGCAAAACTCTC +
Preference number: 5 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITFSKSH*NSSKTL
Trigger: GAGAGTTTTGCTAGAATTCAAGTGAGATTTGCTGAA...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACACACTTCAGAGTGATGTaGTCTTCAAATGTAGATTTC +
Preference number: 5 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITHFRVM*SSNVDF
Trigger: GAAATCTACATTTGAAGACAACATCACTCTGAAGTG...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS-3UTR CAA 90 bp CAGAGTGATGTTGTCTTCAAATGTAGATTTCCACAGGGATTCAAGAGTATAACACAGTGCCATAAGTGGTaGCTATTTTTACAGTTTTCT +
Preference number: 5 (lower is better)
Translates to: QSDVVFKCRFPQGFKSITQCHKW*LFLQFS
Trigger: AGAAAACTGTAAAAATAGCAACCACTTATGGCACTG...TGTTATACTCTTGAATCCCTGTGGAAATCTACATTTGAAGACAACATCACTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS GCA 72 bp CCGCCCCGGAAGAGCCTGCGGCCGCGACCCCACCCGTaGGGCGCCTGGGTTGGTAGGGTGCTGGCACTTTGC +
Preference number: 6 (lower is better)
Translates to: PPRKSLRPRPHP*GAWVGRVLALC
Trigger: GCAAAGTGCCAGCACCCTACCAACCCAGGCGCCGCACGGGTGGGGTCGCGGCCGCAGGCTCTTCCGGGGCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS CAA 72 bp GCCTGCGGCCGCGACCCCACCCGTGCGGCGCCTGGGTaGGTAGGGTGCTGGCACTTTGCAGGCGTTCCCCGG +
Preference number: 6 (lower is better)
Translates to: ACGRDPTRAAPG*VGCWHFAGVPR
Trigger: CCGGGGAACGCCTGCAAAGTGCCAGCACCCTACCAACCCAGGCGCCGCACGGGTGGGGTCGCGGCCGCAGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS CAA 90 bp CCCGGAAGAGCCTGCGGCCGCGACCCCACCCGTGCGGCGCCTGGGTaGGTAGGGTGCTGGCACTTTGCAGGCGTTCCCCGGACGCCCGTG +
Preference number: 6 (lower is better)
Translates to: PGRACGRDPTRAAPG*VGCWHFAGVPRTPV
Trigger: CACGGGCGTCCGGGGAACGCCTGCAAAGTGCCAGCACCCTACCAACCCAGGCGCCGCACGGGTGGGGTCGCGGCCGCAGGCTCTTCCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS GCA 72 bp CGCGACCCCACCCGTGCGGCGCCTGGGTTGGTAGGGTaGTGGCACTTTGCAGGCGTTCCCCGGACGCCCGTG +
Preference number: 6 (lower is better)
Translates to: RDPTRAAPGLVG*WHFAGVPRTPV
Trigger: CACGGGCGTCCGGGGAACGCCTGCAAAGTGCCAGCACCCTACCAACCCAGGCGCCGCACGGGTGGGGTCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS GCA 72 bp CCGTGCGGCGCCTGGGTTGGTAGGGTGCTGGCACTTTaGAGGCGTTCCCCGGACGCCCGTGGGCGGGCTTTC +
Preference number: 6 (lower is better)
Translates to: PCGAWVGRVLAL*RRSPDARGRAF
Trigger: GAAAGCCCGCCCACGGGCGTCCGGGGAACGCCTGCAAAGTGCCAGCACCCTACCAACCCAGGCGCCGCACGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS GCA 72 bp CACCGACCAGCGCTAACAATGAGCCCCTACACCGGCTaGGGCTGTTCCTCAGTGCGCCGGTGCACCGGTAAG +
Preference number: 6 (lower is better)
Translates to: HRPALTMSPYTG*GCSSVRRCTGK
Trigger: CTTACCGGTGCACCGGCGCACTGAGGAACAGCCGCAGCCGGTGTAGGGGCTCATTGTTAGCGCTGGTCGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502580.5
CDS CCA 72 bp GGTGCTGGCACTTTGCAGGCGTTCCCCGGACGCCCGTaGGCGGGCTTTCCTGGTCTTTCCAGTTTAACCAGG +
Preference number: 6 (lower is better)
Translates to: GAGTLQAFPGRP*AGFPGLSSLTR
Trigger: CCTGGTTAAACTGGAAAGACCAGGAAAGCCCGCCCACGGGCGTCCGGGGAACGCCTGCAAAGTGCCAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS CAA 90 bp GGGCAGGGACGGCTGCTCCTAGCATCAGGACCTAAAAGATGCACCTaGGGCCGGCCCTTTACTGACCCCACCGCCACCCTTCTCCTTCGT +
Preference number: 6 (lower is better)
Translates to: GQGRLLLASGPKRCT*GRPFTDPTATLLLR
Trigger: ACGAAGGAGAAGGGTGGCGGTGGGGTCAGTAAAGGGCCGGCCCAAGGTGCATCTTTTAGGTCCTGATGCTAGGAGCAGCCGTCCCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS GCA 72 bp CAGGGACGGCTGCTCCTAGCATCAGGACCTAAAAGATaGACCTTGGGCCGGCCCTTTACTGACCCCACCGCC +
Preference number: 6 (lower is better)
Translates to: QGRLLLASGPKR*TLGRPFTDPTA
Trigger: GGCGGTGGGGTCAGTAAAGGGCCGGCCCAAGGTGCATCTTTTAGGTCCTGATGCTAGGAGCAGCCGTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS CAA 72 bp CGGCTGCTCCTAGCATCAGGACCTAAAAGATGCACCTaGGGCCGGCCCTTTACTGACCCCACCGCCACCCTT +
Preference number: 6 (lower is better)
Translates to: RLLLASGPKRCT*GRPFTDPTATL
Trigger: AAGGGTGGCGGTGGGGTCAGTAAAGGGCCGGCCCAAGGTGCATCTTTTAGGTCCTGATGCTAGGAGCAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS TCA 72 bp GGCTTAGAGAGGATGTGGCAAGAAAGGATCTTTCACTaGGCTACGTTCAGCCCTGCCGCCAGCTCAAGAATT +
Preference number: 6 (lower is better)
Translates to: GLERMWQERIFH*ATFSPAASSRI
Trigger: AATTCTTGAGCTGGCGGCAGGGCTGAACGTAGCTCAGTGAAAGATCCTTTCTTGCCACATCCTCTCTAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS GCA 72 bp CTACGTTCAGCCCTGCCGCCAGCTCAAGAATTTCAGTaGTTTTTATCCTTGAGCTTCTGCTTATGCCCTTCC +
Preference number: 6 (lower is better)
Translates to: LRSALPPAQEFQ*FLSLSFCLCPS
Trigger: GGAAGGGCATAAGCAGAAGCTCAAGGATAAAAAGCACTGAAATTCTTGAGCTGGCGGCAGGGCTGAACGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509894.5
CDS CAA 72 bp TTTGAATTTCCCCGTCGCTATCACTACGGTCTCCTATaGGTCAATGCTAGCCACGTAGAAGCGACAGTCGTG +
Preference number: 6 (lower is better)
Translates to: FEFPRRYHYGLL*VNASHVEATVV
Trigger: CACGACTGTCGCTTCTACGTGGCTAGCATTGACCAATAGGAGACCGTAGTGATAGCGACGGGGAAATTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS CAA 90 bp GCAAACACGTTTGAATTTCCCCGTCGCTATCACTACGGTCTCCTATaGGTCAATGCTAGCCACGTAGAAGCGACAGTCGTGATTGGTTCT +
Preference number: 6 (lower is better)
Translates to: ANTFEFPRRYHYGLL*VNASHVEATVVIGS
Trigger: AGAACCAATCACGACTGTCGCTTCTACGTGGCTAGCATTGACCAATAGGAGACCGTAGTGATAGCGACGGGGAAATTCAAACGTGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS CAA 90 bp TTTGATGCTGTTGCTGCTGGAAACAGGCAGGTTGGCCATAAGGTGTaGACAACTGACAAGCAGGTGGAAAGTCATTCTTTACAACTGGAG +
Preference number: 6 (lower is better)
Translates to: FDAVAAGNRQVGHKV*TTDKQVESHSLQLE
Trigger: CTCCAGTTGTAAAGAATGACTTTCCACCTGCTTGTCAGTTGTCAACACCTTATGGCCAACCTGCCTGTTTCCAGCAGCAACAGCATCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS TCA 72 bp CGGATTCCATTTCTACAGAAAGCTGCGCTGGGGAAATaGAAAGATGGAACCCAAACTCCTTTCCGCAAACAC +
Preference number: 6 (lower is better)
Translates to: RIPFLQKAALGK*KDGTQTPFRKH
Trigger: GTGTTTGCGGAAAGGAGTTTGGGTTCCATCTTTTCATTTCCCCAGCGCAGCTTTCTGTAGAAATGGAATCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369798.7
ENST00000509313.5
ENST00000509894.5
CDS GCA 72 bp GCAAGAAAGGATCTTTCACTGAGCTACGTTCAGCCCTaGCGCCAGCTCAAGAATTTCAGTGCTTTTTATCCT +
Preference number: 6 (lower is better)
Translates to: ARKDLSLSYVQP*RQLKNFSAFYP
Trigger: AGGATAAAAAGCACTGAAATTCTTGAGCTGGCGGCAGGGCTGAACGTAGCTCAGTGAAAGATCCTTTCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509894.5
CDS TCA 72 bp AAAGATGGAACCCAAACTCCTTTCCGCAAACACGTTTaGATTTCCCCGTCGCTATCACTACGGTCTCCTATT +
Preference number: 6 (lower is better)
Translates to: KDGTQTPFRKHV*ISPSLSLRSPI
Trigger: AATAGGAGACCGTAGTGATAGCGACGGGGAAATTCAAACGTGTTTGCGGAAAGGAGTTTGGGTTCCATCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS CAA 72 bp AAAAGATGGAACCCAAACTCCTTTCCGCAAACACGTTaGAATTTCCCCGTCGCTATCACTACGGTCTCCTAT +
Preference number: 6 (lower is better)
Translates to: KRWNPNSFPQTR*NFPVAITTVSY
Trigger: ATAGGAGACCGTAGTGATAGCGACGGGGAAATTCAAACGTGTTTGCGGAAAGGAGTTTGGGTTCCATCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230510.7
ENST00000509894.5
CDS CAA 72 bp TCCCTTGGCCATTTGGTTAACTGGATGAGTTTGAATTaGAACATATGGATGAGCCAGGAGCTCAGGAATGGA +
Preference number: 6 (lower is better)
Translates to: SLGHLVNWMSLN*NIWMSQELRNG
Trigger: TCCATTCCTGAGCTCCTGGCTCATCCATATGTTCAAATTCAAACTCATCCAGTTAACCAAATGGCCAAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS TCA 72 bp GTATTAACTTTTCGGGCTAACTCCGGAATCTGCCAGTaGTTTGAAGATGCAGCAGGATTCTGGTTAATACAC +
Preference number: 6 (lower is better)
Translates to: VLTFRANSGICQ*FEDAAGFWLIH
Trigger: GTGTATTAACCAGAATCCTGCTGCATCTTCAAATCACTGGCAGATTCCGGAGTTAGCCCGAAAAGTTAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
ENST00000515751.1
CDS CAA 72 bp GATGAGCCAGGAGCTCAGGAATGGATATCCTCTGTTTaGGGTCCCTTTTTAAACAACACTTTAACACATCTT +
Preference number: 6 (lower is better)
Translates to: DEPGAQEWISSV*GPFLNNTLTHL
Trigger: AAGATGTGTTAAAGTGTTGTTTAAAAAGGGACCCAAAACAGAGGATATCCATTCCTGAGCTCCTGGCTCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000504590.1
ENST00000509894.5
CDS CAA 90 bp GAACATATGGATGAGCCAGGAGCTCAGGAATGGATATCCTCTGTTTaGGGTCCCTTTTTAAACAACACTTTAACACATCTTGAAGATCTT +
Preference number: 6 (lower is better)
Translates to: EHMDEPGAQEWISSV*GPFLNNTLTHLEDL
Trigger: AAGATCTTCAAGATGTGTTAAAGTGTTGTTTAAAAAGGGACCCAAAACAGAGGATATCCATTCCTGAGCTCCTGGCTCATCCATATGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000504590.1
ENST00000509894.5
CDS CCA 72 bp CAACTGACAAGCAGGTGGAAAGTCATTCTTTACAACTaGAGTTCTAAAACAGCTCATGTAATCATCCAAGGT +
Preference number: 6 (lower is better)
Translates to: QLTSRWKVILYN*SSKTAHVIIQG
Trigger: ACCTTGGATGATTACATGAGCTGTTTTAGAACTCCAGTTGTAAAGAATGACTTTCCACCTGCTTGTCAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
ENST00000515751.1
CDS CCA 72 bp AAGAAGATGCTAAAACCTGTAAATTTTGAAGTGGAGTaGCAAGTATTTGATGCTGTTGCTGCTGGAAACAGG +
Preference number: 6 (lower is better)
Translates to: KKMLKPVNFEVE*QVFDAVAAGNR
Trigger: CCTGTTTCCAGCAGCAACAGCATCAAATACTTGCCACTCCACTTCAAAATTTACAGGTTTTAGCATCTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS CCA 72 bp TTCAAAATGGAGTTAGGAGAATTCAGACCAACAAGTTaGCCCAGAACATATTTCATTTCTTCAGTGGTTCCC +
Preference number: 6 (lower is better)
Translates to: FKMELGEFRPTS*PRTYFISSVVP
Trigger: GGGAACCACTGAAGAAATGAAATATGTTCTGGGCCAACTTGTTGGTCTGAATTCTCCTAACTCCATTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS CCA 72 bp ATTCTCTCTGGAGGAAGACATATCTTTGATTGCTTCTaGTGGCATATAATTAACTGTGCCAACCTATATGCC +
Preference number: 6 (lower is better)
Translates to: ILSGGRHIFDCF*WHIINCANLYA
Trigger: GGCATATAGGTTGGCACAGTTAATTATATGCCACCAGAAGCAATCAAAGATATGTCTTCCTCCAGAGAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504590.1
CDS TCA 72 bp TCTAGAGGTTTGTCTTTTCATAAAACAAGGTACAACTaGATCATCTGTCTTCACATCACAATCTGGGCTATT +
Preference number: 6 (lower is better)
Translates to: SRGLSFHKTRYN*IICLHITIWAI
Trigger: AATAGCCCAGATTGTGATGTGAAGACAGATGATTCAGTTGTACCTTGTTTTATGAAAAGACAAACCTCTAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230510.7
ENST00000369798.7
ENST00000509894.5
CDS CCA 72 bp TATATCAAATTTCTTCACAACTGCAGCAAAACGAGTTaGGTTCATAATCAGCAAAGTGACTCCTTTCAGAAT +
Preference number: 6 (lower is better)
Translates to: YIKFLHNCSKTS*VHNQQSDSFQN
Trigger: ATTCTGAAAGGAGTCACTTTGCTGATTATGAACCCAACTCGTTTTGCTGCAGTTGTGAAGAAATTTGATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504590.1