RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTI2 (Homo sapiens)

Ensembl gene IDs: ENSG00000129696

Ensembl transcript IDs: ENST00000360742.9, ENST00000431156.7, ENST00000519356.1, ENST00000520636.5, ENST00000523305.1, ENST00000613904.1

Found 296 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTTATTATTTATGCCACGTCAGTGGGGCAAGAAATCTGGAGTGAGTaGAGAAAGCTAAGTTGTGAACAAGAGTGTTTTTATAGCATATGT +
Preference number: 1 (lower is better)
Translates to: FIIYATSVGQEIWSE*RKLSCEQECFYSIC
Trigger: ACATATGCTATAAAAACACTCTTGTTCACAACTTAGCTTTCTTCACTCACTCCAGATTTCTTGCCCCACTGACGTGGCATAAATAATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431156.7
ENST00000613904.1
3UTR-3UTR TCA 90 bp AGAAAACGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGGCCGAGAAACTTAACAGATaGGTTCTTGAATCTGGGATG +
Preference number: 2 (lower is better)
Translates to: RKRAYVEIEYEQETEPVAEKLNR*VLESGM
Trigger: CATCCCAGATTCAAGAACTCATCTGTTAAGTTTCTC...GGCCACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCGTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613904.1
3UTR-3UTR TCA 90 bp AGAGCCCGTGGCCAAAGCCAAAACCACGTGATTTCCCTTTCAGCATTTATACCCGCAAGAAATCTGGAGTaGGTGAAGAAAGCTAAGTTG +
Preference number: 2 (lower is better)
Translates to: RARGQSQNHVISLSAFIPARNLE*VKKAKL
Trigger: CAACTTAGCTTTCTTCACTCACTCCAGATTTCTTGC...GGGTATAAATGCTGAAAGGGAAATCACGTGGTTTTGGCTTTGGCCACGGGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613904.1
3UTR-3UTR CCA 90 bp GCAGAGAAAACGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTTCATACAAATTGGGATaGGAAGAAAATCCTTTCCTC +
Preference number: 2 (lower is better)
Translates to: AEKTSLCGNRIRAGDRARSYKLG*EENPFL
Trigger: GAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGA...ACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCGTTTTCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613904.1
3UTR-3UTR TCA 90 bp ATTTGTGTTTTTATTATTTATGCCACGTCAGTGGGGCAAGAAATCTGGAGTGAGTTCTTGAATCTGGGATaGGATGACGGATGTAAATAT +
Preference number: 2 (lower is better)
Translates to: ICVFIIYATSVGQEIWSEFLNLG*DDGCKY
Trigger: ATATTTACATCCGTCATCTCATCCCAGATTCAAGAA...CTCACTCCAGATTTCTTGCCCCACTGACGTGGCATAAATAATAAAAACACAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431156.7
ENST00000613904.1
3UTR-3UTR CCA 90 bp ATTTGTGTTTTTATTATTTATGCCACGTCAGTGGGGCAAGAAATCTGGAGTGAGTCATACAAATTGGGATaGGAAGAAAATCCTTTCCTC +
Preference number: 2 (lower is better)
Translates to: ICVFIIYATSVGQEIWSESYKLG*EENPFL
Trigger: GAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGA...CTCACTCCAGATTTCTTGCCCCACTGACGTGGCATAAATAATAAAAACACAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000431156.7
ENST00000613904.1
3UTR-3UTR CCA 90 bp ATTTGTGTTTTTATTATTTATGCCACGTCAGTGGGGCAAGAAATCTGGAGTGAGTCCATTCATACAAATTaGGATGGGAAGAAAATCCTT +
Preference number: 2 (lower is better)
Translates to: ICVFIIYATSVGQEIWSESIHTN*DGKKIL
Trigger: AAGGATTTTCTTCCCATCCCAATTTGTATGAATGGA...CTCACTCCAGATTTCTTGCCCCACTGACGTGGCATAAATAATAAAAACACAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000431156.7
ENST00000613904.1
3UTR-3UTR CAA 90 bp AGAAAACGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGGCCACACACCTCCAGTTTTaGCTCTTTTGTGTTGTACTG +
Preference number: 3 (lower is better)
Translates to: RKRAYVEIEYEQETEPVATHLQF*LFCVVL
Trigger: CAGTACAACACAAAAGAGCAAAAACTGGAGGTGTGT...GGCCACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCGTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613904.1
3UTR-3UTR CAA 90 bp CAGAGAAAACGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGCCAGTTTTTGCTCTTTaGTGTTGTACTGAACACAAT +
Preference number: 3 (lower is better)
Translates to: QRKRAYVEIEYEQETEPVPVFAL*CCTEHN
Trigger: ATTGTGTTCAGTACAACACAAAAGAGCAAAAACTGG...CACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCGTTTTCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613904.1
3UTR TCA 72 bp TATGCCACGTCAGTGGGGCAAGAAATCTGGAGTGAGTaGAGAAAGCTAAGTTGTGAACAAGAGTGTTTTTAT +
Preference number: 3 (lower is better)
Translates to: YATSVGQEIWSE*RKLSCEQECFY
Trigger: ATAAAAACACTCTTGTTCACAACTTAGCTTTCTTCACTCACTCCAGATTTCTTGCCCCACTGACGTGGCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431156.7
ENST00000613904.1
CDS-3UTR GCA 90 bp CGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGGCCAAAGCCCCACCCCCAGGTACCTaGAACGGCTCGCGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: RAYVEIEYEQETEPVAKAPPPGT*NGSRPP
Trigger: CGGCGGGCGCGAGCCGTTGCAGGTACCTGGGGGTGG...GGCTTTGGCCACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR GCA 90 bp CGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGGCCAAAGCCCAGGCCCGTCTGCCATaGAGGGCCGACCAGGGAATT +
Preference number: 4 (lower is better)
Translates to: RAYVEIEYEQETEPVAKAQARLP*RADQGI
Trigger: AATTCCCTGGTCGGCCCTGCATGGCAGACGGGCCTG...GGCTTTGGCCACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR CCA 90 bp CGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGGCCAAAGCCCCCACAGAACGAGGATaGAGGCGGGGAGGGATCCGT +
Preference number: 4 (lower is better)
Translates to: RAYVEIEYEQETEPVAKAPTERG*RRGGIR
Trigger: ACGGATCCCTCCCCGCCTCCATCCTCGTTCTGTGGG...GGCTTTGGCCACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR TCA 90 bp AGAAAACGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGGCCCGGGGAGGGATCCGTTaGAGAGGGAAGGAGCGATCA +
Preference number: 4 (lower is better)
Translates to: RKRAYVEIEYEQETEPVARGGIR*RGKERS
Trigger: TGATCGCTCCTTCCCTCTTCAACGGATCCCTCCCCG...GGCCACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCGTTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR TCA 90 bp AGAAAACGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGGCCTCAGCCAGGGCCGAGTaGCCTGTTGCAGAGTCCATG +
Preference number: 4 (lower is better)
Translates to: RKRAYVEIEYEQETEPVASARAE*PVAESM
Trigger: CATGGACTCTGCAACAGGTCACTCGGCCCTGGCTGA...GGCCACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCGTTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR GCA 90 bp GCAGAGAAAACGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTTCGGCCGCTTCGGAGTaGCCATCACCTCCACCTTCC +
Preference number: 4 (lower is better)
Translates to: AEKTSLCGNRIRAGDRARSAASE*PSPPPS
Trigger: GGAAGGTGGAGGTGATGGGCACTCCGAAGCGGCCGA...ACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCGTTTTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR TCA 90 bp CGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGGCCAAAGCCTGTCCAAAGGCGGAGTaGGACAACTCCTCGGACAAA +
Preference number: 4 (lower is better)
Translates to: RAYVEIEYEQETEPVAKACPKAE*DNSSDK
Trigger: TTTGTCCGAGGAGTTGTCTCACTCCGCCTTTGGACA...GGCTTTGGCCACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR TCA 90 bp GAGAAAACGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGGCGGAGCACAGCCTGAATaGGGTGGTGCTCTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: EKTSLCGNRIRAGDRARGGAQPE*GGALVC
Trigger: ACACACCAGAGCACCACCTCATTCAGGCTGTGCTCC...GCCACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCGTTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR GCA 90 bp CGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGGCCAAAGCCGGACCTAGCTCATATTaGTGCCGCAAAACGCAAGGC +
Preference number: 4 (lower is better)
Translates to: RAYVEIEYEQETEPVAKAGPSSY*CRKTQG
Trigger: GCCTTGCGTTTTGCGGCAGCAATATGAGCTAGGTCC...GGCTTTGGCCACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR CCA 90 bp CGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGGCCAAAGCCCATCACAATGGGTGGTaGGTCGAGCTCCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: RAYVEIEYEQETEPVAKAHHNGW*VELHLL
Trigger: AAGGAGATGGAGCTCGACCCACCACCCATTGTGATG...GGCTTTGGCCACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR GCA 90 bp CGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGGCCAAAGCCTTCTTGCGTAGGTCCTaGGTAAAAGAAGGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: RAYVEIEYEQETEPVAKAFLRRS*VKEGGA
Trigger: AGCACCGCCTTCTTTTACGCAGGACCTACGCAAGAA...GGCTTTGGCCACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR GCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCCCACCCCCAGGTACCTaGAACGGCTCGCGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVPPPGT*NGSRPP
Trigger: CGGCGGGCGCGAGCCGTTGCAGGTACCTGGGGGTGG...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360742.9
ENST00000613904.1
CDS-3UTR GCA 90 bp CAGAGAAAACGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGAGGGCTTTTGCTACCTaGCCCAGTGTCTCCGGCATT +
Preference number: 4 (lower is better)
Translates to: QRKRAYVEIEYEQETEPVRAFAT*PSVSGI
Trigger: AATGCCGGAGACACTGGGGCAGGTAGCAAAAGCCCT...CACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCGTTTTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR GCA 90 bp GAGAAAACGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGGCTCCAGCCTCTTTAAGTaGCGGACAGTTAGGATCCCC +
Preference number: 4 (lower is better)
Translates to: EKTSLCGNRIRAGDRARGSSLFK*RTVRIP
Trigger: GGGGATCCTAACTGTCCGGCACTTAAAGAGGCTGGA...GCCACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCGTTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR CCA 90 bp CAGAGAAAACGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGAGGACCTCATCACAATaGGTGGTGGGTCGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: QRKRAYVEIEYEQETEPVRTSSQ*VVGRAP
Trigger: TGGAGCTCGACCCACCACCCATTGTGATGAGGTCCT...CACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCGTTTTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR CCA 90 bp CGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGGCCAAAGCCTCTGGTGTGTACAGGTaGTTGGAAATGGCATGGTAT +
Preference number: 4 (lower is better)
Translates to: RAYVEIEYEQETEPVAKASGVYR*LEMAWY
Trigger: ATACCATGCCATTTCCAACCACCTGTACACACCAGA...GGCTTTGGCCACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR CCA 90 bp AGAAAACGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGGCCAGCTTTGGGGAATTTTaGCCAGGAGACCCTTTACCC +
Preference number: 4 (lower is better)
Translates to: RKRAYVEIEYEQETEPVASFGEF*PGDPLP
Trigger: GGGTAAAGGGTCTCCTGGCCAAAATTCCCCAAAGCT...GGCCACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCGTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR GCA 90 bp GCAGAGAAAACGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGTAAGACCACAAGTCTaGAGGAAACTCTGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: AEKTSLCGNRIRAGDRARVRPQV*RKLWAK
Trigger: CTTGGCCCAGAGTTTCCTGCAGACTTGTGGTCTTAC...ACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCGTTTTCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR CCA 90 bp CAGAGAAAACGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGTGGGCTCTGTTATACTaGAGCAAATCAGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: QRKRAYVEIEYEQETEPVWALLY*SKSAAG
Trigger: GCCAGCTGCTGATTTGCTCCAGTATAACAGAGCCCA...CACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCGTTTTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR CCA 90 bp AGAGCCCGTGGCCAAAGCCAAAACCACGTGATTTCCCTTTCAGCATTTATACCCGCATGGTATAGGACCTaGGCTCTGTTATACTGGAGC +
Preference number: 4 (lower is better)
Translates to: RARGQSQNHVISLSAFIPAWYRT*ALLYWS
Trigger: GCTCCAGTATAACAGAGCCCAGGTCCTATACCATGC...GGGTATAAATGCTGAAAGGGAAATCACGTGGTTTTGGCTTTGGCCACGGGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR CCA 90 bp CAGAGAAAACGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGTGGTTGGAAATGGCATaGTATAGGACCTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: QRKRAYVEIEYEQETEPVWLEMA*YRTWAL
Trigger: CAGAGCCCAGGTCCTATACCATGCCATTTCCAACCA...CACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCGTTTTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR CCA 90 bp CAGAGAAAACGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGACAGGTGGTTGGAAATaGCATGGTATAGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: QRKRAYVEIEYEQETEPVTGGWK*HGIGPG
Trigger: CCCAGGTCCTATACCATGCCATTTCCAACCACCTGT...CACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCGTTTTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR TCA 90 bp AGAGCCCGTGGCCAAAGCCAAAACCACGTGATTTCCCTTTCAGCATTTATACCCTATACAAGTCGGGTTTaGGAAGCCCTAGTATCACCG +
Preference number: 4 (lower is better)
Translates to: RARGQSQNHVISLSAFIPYTSRV*EALVSP
Trigger: CGGTGATACTAGGGCTTCTCAAACCCGACTTGTATA...GGGTATAAATGCTGAAAGGGAAATCACGTGGTTTTGGCTTTGGCCACGGGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR CCA 90 bp CAAAGCCAAAACCACGTGATTTCCCTTTCAGCATTTATACCCAGGACTGAACATCCCGAGATCTCGGAGTaGTCCATGGTTGCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: QSQNHVISLSAFIPRTEHPEISE*SMVAPS
Trigger: GCTTGGAGCAACCATGGACCACTCCGAGATCTCGGG...ATGTTCAGTCCTGGGTATAAATGCTGAAAGGGAAATCACGTGGTTTTGGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR TCA 90 bp GCAGAGAAAACGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTCTGTTGCAGAGTCCATaGGAAAACATGTTTGATGGC +
Preference number: 4 (lower is better)
Translates to: AEKTSLCGNRIRAGDRARLLQSP*ENMFDG
Trigger: GCCATCAAACATGTTTTCTCATGGACTCTGCAACAG...ACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCGTTTTCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR TCA 90 bp AGAAAACGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGGCCGCCAAGTATGTTGCATaGGAAGTTTTAGGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: RKRAYVEIEYEQETEPVAAKYVA*EVLGFP
Trigger: TGGAAACCCTAAAACTTCTCATGCAACATACTTGGC...GGCCACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCGTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR GCA 90 bp CAAAGCCAAAACCACGTGATTTCCCTTTCAGCATTTATACCCAGGACTGAACATAGCTCCATTCCTGACTaGAGCACCAGAAGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: QSQNHVISLSAFIPRTEHSSIPD*STRRLV
Trigger: GACCAGCCTTCTGGTGCTGCAGTCAGGAATGGAGCT...ATGTTCAGTCCTGGGTATAAATGCTGAAAGGGAAATCACGTGGTTTTGGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR GCA 90 bp TCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATTCGGCCGCTTCGGAGTaGCCATCACCTCCACCTTCC +
Preference number: 4 (lower is better)
Translates to: SIHTNWDGKKILSSWESNSAASE*PSPPPS
Trigger: GGAAGGTGGAGGTGATGGGCACTCCGAAGCGGCCGA...ATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR GCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCTCGGCCGCTTCGGAGTaGCCATCACCTCCACCTTCC +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVSAASE*PSPPPS
Trigger: GGAAGGTGGAGGTGATGGGCACTCCGAAGCGGCCGA...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR GCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCAGGCCCGTCTGCCATaGAGGGCCGACCAGGGAATT +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSQARLP*RADQGI
Trigger: AATTCCCTGGTCGGCCCTGCATGGCAGACGGGCCTG...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR GCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCCAGGCCCGTCTGCCATaGAGGGCCGACCAGGGAATT +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVQARLP*RADQGI
Trigger: AATTCCCTGGTCGGCCCTGCATGGCAGACGGGCCTG...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCCCACAGAACGAGGATaGAGGCGGGGAGGGATCCGT +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSPTERG*RRGGIR
Trigger: ACGGATCCCTCCCCGCCTCCATCCTCGTTCTGTGGG...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCCCCACAGAACGAGGATaGAGGCGGGGAGGGATCCGT +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVPTERG*RRGGIR
Trigger: ACGGATCCCTCCCCGCCTCCATCCTCGTTCTGTGGG...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CCA 90 bp ATTTGTGTTTTTATTATTTATGCCACGTCAGTGGGGCAAGAAATCTGGAGTGAGTGCTCTGGCTCCATGTaGGTCAGGATCAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: ICVFIIYATSVGQEIWSECSGSM*VRISRR
Trigger: CCTGCGGCTGATCCTGACCCACATGGAGCCAGAGCA...CTCACTCCAGATTTCTTGCCCCACTGACGTGGCATAAATAATAAAAACACAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431156.7
ENST00000613904.1
CDS-3UTR TCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCGGGGAGGGATCCGTTaGAGAGGGAAGGAGCGATCA +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSRGGIR*RGKERS
Trigger: TGATCGCTCCTTCCCTCTTCAACGGATCCCTCCCCG...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR TCA 90 bp AATAACTCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAATCAGCCAGGGCCGAGTaGCCTGTTGCAGAGTCCATG +
Preference number: 4 (lower is better)
Translates to: NNSIHTNWDGKKILSSWESARAE*PVAESM
Trigger: CATGGACTCTGCAACAGGTCACTCGGCCCTGGCTGA...TTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGAGTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR TCA 90 bp TCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATTCAGCCAGGGCCGAGTaGCCTGTTGCAGAGTCCATG +
Preference number: 4 (lower is better)
Translates to: SIHTNWDGKKILSSWESNSARAE*PVAESM
Trigger: CATGGACTCTGCAACAGGTCACTCGGCCCTGGCTGA...ATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR TCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCTCAGCCAGGGCCGAGTaGCCTGTTGCAGAGTCCATG +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVSARAE*PVAESM
Trigger: CATGGACTCTGCAACAGGTCACTCGGCCCTGGCTGA...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR TCA 90 bp GCAGAGAAAACGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGCAAGAAATCTGGAGTaGGTGAAGAAAGCTAAGTTG +
Preference number: 4 (lower is better)
Translates to: AEKTSLCGNRIRAGDRARARNLE*VKKAKL
Trigger: CAACTTAGCTTTCTTCACTCACTCCAGATTTCTTGC...ACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCGTTTTCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR GCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCTACATTGCCTCGTCGTaGCTCCGGGCGGGCAAGACA +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVYIASS*LRAGKT
Trigger: TGTCTTGCCCGCCCGGAGGCACGACGAGGCAATGTA...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR GCA 90 bp TTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAATCGGCCGCTTCGGAGTaGCCATCACCTCCACCTTCC +
Preference number: 4 (lower is better)
Translates to: FIQIGMGRKSFPLGKVIQSAASE*PSPPPS
Trigger: GGAAGGTGGAGGTGATGGGCACTCCGAAGCGGCCGA...TTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR GCA 90 bp TTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAATCACCCAAAGAGAACTaGAACGGCTCGCGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: FIQIGMGRKSFPLGKVIQSPKEN*NGSRPP
Trigger: CGGCGGGCGCGAGCCGTTGCAGTTCTCTTTGGGTGA...TTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431156.7
CDS-3UTR CCA 90 bp CAAAGCCAAAACCACGTGATTTCCCTTTCAGCATTTATACCCAGGACTGAACATAACAGTAACCCAACTTaGGCTGCTTTCTCGGCCGCT +
Preference number: 4 (lower is better)
Translates to: QSQNHVISLSAFIPRTEHNSNPT*AAFSAA
Trigger: AGCGGCCGAGAAAGCAGCCCAAGTTGGGTTACTGTT...ATGTTCAGTCCTGGGTATAAATGCTGAAAGGGAAATCACGTGGTTTTGGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR CCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTTGCTCTGGCTCCATGTaGGTCAGGATCAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSCSGSM*VRISRR
Trigger: CCTGCGGCTGATCCTGACCCACATGGAGCCAGAGCA...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCTGCTCTGGCTCCATGTaGGTCAGGATCAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVCSGSM*VRISRR
Trigger: CCTGCGGCTGATCCTGACCCACATGGAGCCAGAGCA...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCGAATCAGGCAGTCTGTaGCCTCCTGTAGCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVESGSL*PPVAGR
Trigger: GCGCCCTGCTACAGGAGGCCACAGACTGCCTGATTC...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR TCA 90 bp GCAGAGAAAACGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTATGAGAAAACATGTTTaGTGGCAGGGTTATTCTTCC +
Preference number: 4 (lower is better)
Translates to: AEKTSLCGNRIRAGDRARMRKHV*WQGYSS
Trigger: GGAAGAATAACCCTGCCATCAAACATGTTTTCTCAT...ACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCGTTTTCTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR TCA 90 bp AATAACTCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAGGAGCACAGCCTGAATaGGGTGGTGCTCTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: NNSIHTNWDGKKILSSWEGAQPE*GGALVC
Trigger: ACACACCAGAGCACCACCTCATTCAGGCTGTGCTCC...TTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGAGTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR TCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCGGAGCACAGCCTGAATaGGGTGGTGCTCTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVGAQPE*GGALVC
Trigger: ACACACCAGAGCACCACCTCATTCAGGCTGTGCTCC...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR TCA 90 bp AATAACTCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAACCCTTTACCCGTCCTTaGGAACAGCGGTCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: NNSIHTNWDGKKILSSWEPFTRP*EQRSRR
Trigger: TCTCCTGGACCGCTGTTCTCAAGGACGGGTAAAGGG...TTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGAGTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR TCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCCCTTTACCCGTCCTTaGGAACAGCGGTCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSPFTRP*EQRSRR
Trigger: TCTCCTGGACCGCTGTTCTCAAGGACGGGTAAAGGG...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR TCA 90 bp GCAGAGAAAACGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGAAATCTGGAGTGAGTaGAGAAAGCTAAGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: AEKTSLCGNRIRAGDRAREIWSE*RKLSCE
Trigger: TTCACAACTTAGCTTTCTTCACTCACTCCAGATTTC...ACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCGTTTTCTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR GCA 90 bp ATTTGTGTTTTTATTATTTATGCCACGTCAGTGGGGCAAGAAATCTGGAGTGAGCTTCTCCAGGGCTTTTaGTACCTGCCCCAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: ICVFIIYATSVGQEIWSELLQGF*YLPQCL
Trigger: GAGACACTGGGGCAGGTAGCAAAAGCCCTGGAGAAG...CTCACTCCAGATTTCTTGCCCCACTGACGTGGCATAAATAATAAAAACACAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000431156.7
ENST00000613904.1
CDS-3UTR GCA 90 bp AATAACTCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTACCCTTTCCAGATaGTGGCTCAGCCAGGGCCGA +
Preference number: 4 (lower is better)
Translates to: NNSIHTNWDGKKILSSWESTLSR*WLSQGR
Trigger: TCGGCCCTGGCTGAGCCAGCATCTGGAAAGGGTACT...TTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGAGTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR GCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCAGTACCCTTTCCAGATaGTGGCTCAGCCAGGGCCGA +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVSTLSR*WLSQGR
Trigger: TCGGCCCTGGCTGAGCCAGCATCTGGAAAGGGTACT...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CCA 90 bp AATAACTCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAGCAGCACCAGAAGGCTaGTCTCTCCCACAGAACGAG +
Preference number: 4 (lower is better)
Translates to: NNSIHTNWDGKKILSSWEAAPEG*SLPQNE
Trigger: CTCGTTCTGTGGGAGAGACCAGCCTTCTGGTGCTGC...TTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGAGTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCGCAGCACCAGAAGGCTaGTCTCTCCCACAGAACGAG +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVAAPEG*SLPQNE
Trigger: CTCGTTCTGTGGGAGAGACCAGCCTTCTGGTGCTGC...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CCA 90 bp AATAACTCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGAGTCTTCCTGCGATaGGGCTTCCAGAGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: NNSIHTNWDGKKILSSWERVFLR*GFQSAV
Trigger: GACAGCGCTCTGGAAGCCCCATCGCAGGAAGACTCT...TTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGAGTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp TCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATAGAGTCTTCCTGCGATaGGGCTTCCAGAGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: SIHTNWDGKKILSSWESNRVFLR*GFQSAV
Trigger: GACAGCGCTCTGGAAGCCCCATCGCAGGAAGACTCT...ATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTAGAGTCTTCCTGCGATaGGGCTTCCAGAGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSRVFLR*GFQSAV
Trigger: GACAGCGCTCTGGAAGCCCCATCGCAGGAAGACTCT...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CCA 90 bp AATAACTCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAACCCGAGATCTCGGAGTaGTCCATGGTTGCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: NNSIHTNWDGKKILSSWEPEISE*SMVAPS
Trigger: GCTTGGAGCAACCATGGACCACTCCGAGATCTCGGG...TTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGAGTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCCCCGAGATCTCGGAGTaGTCCATGGTTGCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVPEISE*SMVAPS
Trigger: GCTTGGAGCAACCATGGACCACTCCGAGATCTCGGG...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CCA 90 bp TTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAATGCTCTGGCTCCATGTaGGTCAGGATCAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: FIQIGMGRKSFPLGKVIQCSGSM*VRISRR
Trigger: CCTGCGGCTGATCCTGACCCACATGGAGCCAGAGCA...TTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp TTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGAATCAGGCAGTCTGTaGCCTCCTGTAGCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: FIQIGMGRKSFPLGKVIQESGSL*PPVAGR
Trigger: GCGCCCTGCTACAGGAGGCCACAGACTGCCTGATTC...TTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR TCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTGTCAAGCTCCATTCCTaGCTGCAGCACCAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSVKLHS*LQHQKA
Trigger: AGCCTTCTGGTGCTGCAGTCAGGAATGGAGCTTGAC...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR TCA 90 bp ATTTGTGTTTTTATTATTTATGCCACGTCAGTGGGGCAAGAAATCTGGAGTGAGCCGCATTCAGTAACTTaGAGCAGTGAGGTGAGCACC +
Preference number: 4 (lower is better)
Translates to: ICVFIIYATSVGQEIWSEPHSVT*SSEVST
Trigger: GGTGCTCACCTCACTGCTTCAAGTTACTGAATGCGG...CTCACTCCAGATTTCTTGCCCCACTGACGTGGCATAAATAATAAAAACACAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431156.7
ENST00000613904.1
CDS-3UTR TCA 90 bp TTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAACCCTTTACCCGTCCTTaGGAACAGCGGTCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: FIQIGMGRKSFPLGKVIQPFTRP*EQRSRR
Trigger: TCTCCTGGACCGCTGTTCTCAAGGACGGGTAAAGGG...TTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR TCA 90 bp GCAGAGAAAACGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTTTCTTGAATCTGGGATaGGATGACGGATGTAAATAT +
Preference number: 4 (lower is better)
Translates to: AEKTSLCGNRIRAGDRARFLNLG*DDGCKY
Trigger: ATATTTACATCCGTCATCTCATCCCAGATTCAAGAA...ACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCGTTTTCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR GCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCAGCTCCATTCCTGACTaGAGCACCAGAAGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVSSIPD*STRRLV
Trigger: GACCAGCCTTCTGGTGCTGCAGTCAGGAATGGAGCT...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR GCA 90 bp AATAACTCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAACTGCATCTTTTACATTaGCTCGTCGTGCCTCCGGGC +
Preference number: 4 (lower is better)
Translates to: NNSIHTNWDGKKILSSWELHLLH*LVVPPG
Trigger: GCCCGGAGGCACGACGAGGCAATGTAAAAGATGCAG...TTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGAGTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR GCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCTGCATCTTTTACATTaGCTCGTCGTGCCTCCGGGC +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSLHLLH*LVVPPG
Trigger: GCCCGGAGGCACGACGAGGCAATGTAAAAGATGCAG...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR GCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCCTGCATCTTTTACATTaGCTCGTCGTGCCTCCGGGC +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVLHLLH*LVVPPG
Trigger: GCCCGGAGGCACGACGAGGCAATGTAAAAGATGCAG...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR GCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTAGGGCTTTTGCTACCTaGCCCAGTGTCTCCGGCATT +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSRAFAT*PSVSGI
Trigger: AATGCCGGAGACACTGGGGCAGGTAGCAAAAGCCCT...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR GCA 90 bp AATAACTCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAACTTCTCCAGGGCTTTTaGTACCTGCCCCAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: NNSIHTNWDGKKILSSWELLQGF*YLPQCL
Trigger: GAGACACTGGGGCAGGTAGCAAAAGCCCTGGAGAAG...TTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGAGTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR GCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCTTCTCCAGGGCTTTTaGTACCTGCCCCAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSLLQGF*YLPQCL
Trigger: GAGACACTGGGGCAGGTAGCAAAAGCCCTGGAGAAG...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR GCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCCTTCTCCAGGGCTTTTaGTACCTGCCCCAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVLLQGF*YLPQCL
Trigger: GAGACACTGGGGCAGGTAGCAAAAGCCCTGGAGAAG...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR GCA 90 bp TTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAAGTACCCTTTCCAGATaGTGGCTCAGCCAGGGCCGA +
Preference number: 4 (lower is better)
Translates to: FIQIGMGRKSFPLGKVIQSTLSR*WLSQGR
Trigger: TCGGCCCTGGCTGAGCCAGCATCTGGAAAGGGTACT...TTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR GCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCGTAAAAGAAGGCGGTaGTCTGGCTCCATGTGGGTC +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSRKRRR*SGSMWV
Trigger: GACCCACATGGAGCCAGAGCACCGCCTTCTTTTACG...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR GCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCCGTAAAAGAAGGCGGTaGTCTGGCTCCATGTGGGTC +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVRKRRR*SGSMWV
Trigger: GACCCACATGGAGCCAGAGCACCGCCTTCTTTTACG...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR GCA 90 bp CAGAGAAAACGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGAAGGTTTGGATCCCTTaGTACATCACAAATCAGTTT +
Preference number: 4 (lower is better)
Translates to: QRKRAYVEIEYEQETEPVKVWIP*YITNQF
Trigger: AAACTGATTTGTGATGTAGCAAGGGATCCAAACCTT...CACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCGTTTTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR CCA 90 bp ATTTGTGTTTTTATTATTTATGCCACGTCAGTGGGGCAAGAAATCTGGAGTGAGTCTCGGAGTGGTCCATaGTTGCTCCAAGCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: ICVFIIYATSVGQEIWSESRSGP*LLQAVC
Trigger: ACACACAGCTTGGAGCAACCATGGACCACTCCGAGA...CTCACTCCAGATTTCTTGCCCCACTGACGTGGCATAAATAATAAAAACACAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCCCTCATCACAATGGGTaGTGGGTCGAGCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVPHHNG*WVELHL
Trigger: GAGATGGAGCTCGACCCACCACCCATTGTGATGAGG...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCCTCATCACAATGGGTaGTGGGTCGAGCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSPHHNG*WVELHL
Trigger: GAGATGGAGCTCGACCCACCACCCATTGTGATGAGG...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTAGGACCTCATCACAATaGGTGGTGGGTCGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSRTSSQ*VVGRAP
Trigger: TGGAGCTCGACCCACCACCCATTGTGATGAGGTCCT...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CCA 90 bp AATAACTCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGGACCTCATCACAATaGGTGGTGGGTCGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: NNSIHTNWDGKKILSSWERTSSQ*VVGRAP
Trigger: TGGAGCTCGACCCACCACCCATTGTGATGAGGTCCT...TTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGAGTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCAGGACCTCATCACAATaGGTGGTGGGTCGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVRTSSQ*VVGRAP
Trigger: TGGAGCTCGACCCACCACCCATTGTGATGAGGTCCT...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CCA 90 bp AATAACTCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAAGAAGGCGGTGCTCTaGCTCCATGTGGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: NNSIHTNWDGKKILSSWEKKAVL*LHVGQD
Trigger: ATCCTGACCCACATGGAGCCAGAGCACCGCCTTCTT...TTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGAGTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTAAGAAGGCGGTGCTCTaGCTCCATGTGGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSKKAVL*LHVGQD
Trigger: ATCCTGACCCACATGGAGCCAGAGCACCGCCTTCTT...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CCA 90 bp TCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATAAGAAGGCGGTGCTCTaGCTCCATGTGGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: SIHTNWDGKKILSSWESNKKAVL*LHVGQD
Trigger: ATCCTGACCCACATGGAGCCAGAGCACCGCCTTCTT...ATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp AGAAAACGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGGCCTCCATTCATACAAATTaGGATGGGAAGAAAATCCTT +
Preference number: 4 (lower is better)
Translates to: RKRAYVEIEYEQETEPVASIHTN*DGKKIL
Trigger: AAGGATTTTCTTCCCATCCCAATTTGTATGAATGGA...GGCCACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCGTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR TCA 90 bp TTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCAAGCTCCATTCCTaGCTGCAGCACCAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: FIQIGMGRKSFPLGKVIQVKLHS*LQHQKA
Trigger: AGCCTTCTGGTGCTGCAGTCAGGAATGGAGCTTGAC...TTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR TCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCTGTCCAAAGGCGGAGTaGGACAACTCCTCGGACAAA +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVCPKAE*DNSSDK
Trigger: TTTGTCCGAGGAGTTGTCTCACTCCGCCTTTGGACA...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR TCA 90 bp TCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATTGTCCAAAGGCGGAGTaGGACAACTCCTCGGACAAA +
Preference number: 4 (lower is better)
Translates to: SIHTNWDGKKILSSWESNCPKAE*DNSSDK
Trigger: TTTGTCCGAGGAGTTGTCTCACTCCGCCTTTGGACA...ATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR TCA 90 bp TCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATAGTAACTTGAAGCAGTaGGGTGAGCACCTCCCTAGC +
Preference number: 4 (lower is better)
Translates to: SIHTNWDGKKILSSWESNSNLKQ*GEHLPS
Trigger: GCTAGGGAGGTGCTCACCTCACTGCTTCAAGTTACT...ATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR TCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTAGTAACTTGAAGCAGTaGGGTGAGCACCTCCCTAGC +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSSNLKQ*GEHLPS
Trigger: GCTAGGGAGGTGCTCACCTCACTGCTTCAAGTTACT...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR TCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCAGTAACTTGAAGCAGTaGGGTGAGCACCTCCCTAGC +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVSNLKQ*GEHLPS
Trigger: GCTAGGGAGGTGCTCACCTCACTGCTTCAAGTTACT...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR TCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCCCGCATTCAGTAACTTaGAGCAGTGAGGTGAGCACC +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVPHSVT*SSEVST
Trigger: GGTGCTCACCTCACTGCTTCAAGTTACTGAATGCGG...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR TCA 90 bp TCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATCCGCATTCAGTAACTTaGAGCAGTGAGGTGAGCACC +
Preference number: 4 (lower is better)
Translates to: SIHTNWDGKKILSSWESNPHSVT*SSEVST
Trigger: GGTGCTCACCTCACTGCTTCAAGTTACTGAATGCGG...ATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR GCA 90 bp TTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAACTGCATCTTTTACATTaGCTCGTCGTGCCTCCGGGC +
Preference number: 4 (lower is better)
Translates to: FIQIGMGRKSFPLGKVIQLHLLH*LVVPPG
Trigger: GCCCGGAGGCACGACGAGGCAATGTAAAAGATGCAG...TTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR GCA 90 bp TTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAAGGGCTTTTGCTACCTaGCCCAGTGTCTCCGGCATT +
Preference number: 4 (lower is better)
Translates to: FIQIGMGRKSFPLGKVIQRAFAT*PSVSGI
Trigger: AATGCCGGAGACACTGGGGCAGGTAGCAAAAGCCCT...TTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR GCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTGGAGTGGTCCATGGTTaGTCCAAGCTGTGTGTGATG +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSGVVHG*SKLCVM
Trigger: CATCACACACAGCTTGGAGCAACCATGGACCACTCC...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR GCA 90 bp TCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATGGAGTGGTCCATGGTTaGTCCAAGCTGTGTGTGATG +
Preference number: 4 (lower is better)
Translates to: SIHTNWDGKKILSSWESNGVVHG*SKLCVM
Trigger: CATCACACACAGCTTGGAGCAACCATGGACCACTCC...ATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR GCA 90 bp ATTTGTGTTTTTATTATTTATGCCACGTCAGTGGGGCAAGAAATCTGGAGTGAGCCATCTCCTTTCCAGTaGAGGGTTTTCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: ICVFIIYATSVGQEIWSEPSPFQ*RVFSRM
Trigger: CATCCTGGAGAAAACCCTGCACTGGAAAGGAGATGG...CTCACTCCAGATTTCTTGCCCCACTGACGTGGCATAAATAATAAAAACACAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000431156.7
ENST00000613904.1
CDS-3UTR GCA 90 bp TTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAACGTAAAAGAAGGCGGTaGTCTGGCTCCATGTGGGTC +
Preference number: 4 (lower is better)
Translates to: FIQIGMGRKSFPLGKVIQRKRRR*SGSMWV
Trigger: GACCCACATGGAGCCAGAGCACCGCCTTCTTTTACG...TTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR GCA 90 bp ATTTGTGTTTTTATTATTTATGCCACGTCAGTGGGGCAAGAAATCTGGAGTGAGTTCTTGCGTAGGTCCTaGGTAAAAGAAGGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: ICVFIIYATSVGQEIWSEFLRRS*VKEGGA
Trigger: AGCACCGCCTTCTTTTACGCAGGACCTACGCAAGAA...CTCACTCCAGATTTCTTGCCCCACTGACGTGGCATAAATAATAAAAACACAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000431156.7
ENST00000613904.1
CDS-3UTR GCA 90 bp AATAACTCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAATCCAGCCTCTTTAAGTaGCGGACAGTTAGGATCCCC +
Preference number: 4 (lower is better)
Translates to: NNSIHTNWDGKKILSSWESSLFK*RTVRIP
Trigger: GGGGATCCTAACTGTCCGGCACTTAAAGAGGCTGGA...TTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGAGTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR GCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCTCCAGCCTCTTTAAGTaGCGGACAGTTAGGATCCCC +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVSSLFK*RTVRIP
Trigger: GGGGATCCTAACTGTCCGGCACTTAAAGAGGCTGGA...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR GCA 90 bp ATTTGTGTTTTTATTATTTATGCCACGTCAGTGGGGCAAGAAATCTGGAGTGAGAGTTCCATTGTAGGGTaGGCCTTCAGAAACCTGCTG +
Preference number: 4 (lower is better)
Translates to: ICVFIIYATSVGQEIWSESSIVG*AFRNLL
Trigger: CAGCAGGTTTCTGAAGGCGCACCCTACAATGGAACT...CTCACTCCAGATTTCTTGCCCCACTGACGTGGCATAAATAATAAAAACACAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCAACAGTAACCCAACTTaGGCTGCTTTCTCGGCCGCT +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVNSNPT*AAFSAA
Trigger: AGCGGCCGAGAAAGCAGCCCAAGTTGGGTTACTGTT...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CCA 90 bp AATAACTCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAACAGTAACCCAACTTaGGCTGCTTTCTCGGCCGCT +
Preference number: 4 (lower is better)
Translates to: NNSIHTNWDGKKILSSWENSNPT*AAFSAA
Trigger: AGCGGCCGAGAAAGCAGCCCAAGTTGGGTTACTGTT...TTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGAGTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCTCTCGGAGTGGTCCATaGTTGCTCCAAGCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVSRSGP*LLQAVC
Trigger: ACACACAGCTTGGAGCAACCATGGACCACTCCGAGA...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CCA 90 bp ATTTGTGTTTTTATTATTTATGCCACGTCAGTGGGGCAAGAAATCTGGAGTGAGTGGTTGGAAATGGCATaGTATAGGACCTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: ICVFIIYATSVGQEIWSEWLEMA*YRTWAL
Trigger: CAGAGCCCAGGTCCTATACCATGCCATTTCCAACCA...CTCACTCCAGATTTCTTGCCCCACTGACGTGGCATAAATAATAAAAACACAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp TCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATCATCACAATGGGTGGTaGGTCGAGCTCCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: SIHTNWDGKKILSSWESNHHNGW*VELHLL
Trigger: AAGGAGATGGAGCTCGACCCACCACCCATTGTGATG...ATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCCATCACAATGGGTGGTaGGTCGAGCTCCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVHHNGW*VELHLL
Trigger: AAGGAGATGGAGCTCGACCCACCACCCATTGTGATG...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR TCA 90 bp TCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATAATAAAGAGAAAGGGTaGACCCGGGAGGCGGAGTTT +
Preference number: 4 (lower is better)
Translates to: SIHTNWDGKKILSSWESNNKEKG*TREAEF
Trigger: AAACTCCGCCTCCCGGGTTCACCCTTTCTCTTTATT...ATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360742.9
CDS-3UTR GCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTAATATAAACGGGTCCTaGCAAGTGATGCAGGCCCGT +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSNINGS*QVMQAR
Trigger: ACGGGCCTGCATCACTTGGCAGGACCCGTTTATATT...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR GCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCAATATAAACGGGTCCTaGCAAGTGATGCAGGCCCGT +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVNINGS*QVMQAR
Trigger: ACGGGCCTGCATCACTTGGCAGGACCCGTTTATATT...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR GCA 90 bp TCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATCCATCTCCTTTCCAGTaGAGGGTTTTCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: SIHTNWDGKKILSSWESNPSPFQ*RVFSRM
Trigger: CATCCTGGAGAAAACCCTGCACTGGAAAGGAGATGG...ATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR GCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCCATCTCCTTTCCAGTaGAGGGTTTTCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSPSPFQ*RVFSRM
Trigger: CATCCTGGAGAAAACCCTGCACTGGAAAGGAGATGG...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR GCA 90 bp AATAACTCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAATTCTTGCGTAGGTCCTaGGTAAAAGAAGGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: NNSIHTNWDGKKILSSWEFLRRS*VKEGGA
Trigger: AGCACCGCCTTCTTTTACGCAGGACCTACGCAAGAA...TTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGAGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR GCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCTTCTTGCGTAGGTCCTaGGTAAAAGAAGGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVFLRRS*VKEGGA
Trigger: AGCACCGCCTTCTTTTACGCAGGACCTACGCAAGAA...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR GCA 90 bp TTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAATCCAGCCTCTTTAAGTaGCGGACAGTTAGGATCCCC +
Preference number: 4 (lower is better)
Translates to: FIQIGMGRKSFPLGKVIQSSLFK*RTVRIP
Trigger: GGGGATCCTAACTGTCCGGCACTTAAAGAGGCTGGA...TTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR GCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCGTAAGACCACAAGTCTaGAGGAAACTCTGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVVRPQV*RKLWAK
Trigger: CTTGGCCCAGAGTTTCCTGCAGACTTGTGGTCTTAC...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR GCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTAGTTCCATTGTAGGGTaGGCCTTCAGAAACCTGCTG +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSSSIVG*AFRNLL
Trigger: CAGCAGGTTTCTGAAGGCGCACCCTACAATGGAACT...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CCA 90 bp TTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAATCTCGGAGTGGTCCATaGTTGCTCCAAGCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: FIQIGMGRKSFPLGKVIQSRSGP*LLQAVC
Trigger: ACACACAGCTTGGAGCAACCATGGACCACTCCGAGA...TTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCTGGGCTCTGTTATACTaGAGCAAATCAGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVWALLY*SKSAAG
Trigger: GCCAGCTGCTGATTTGCTCCAGTATAACAGAGCCCA...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTTGGGCTCTGTTATACTaGAGCAAATCAGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSWALLY*SKSAAG
Trigger: GCCAGCTGCTGATTTGCTCCAGTATAACAGAGCCCA...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCGCATGGTATAGGACCTaGGCTCTGTTATACTGGAGC +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVAWYRT*ALLYWS
Trigger: GCTCCAGTATAACAGAGCCCAGGTCCTATACCATGC...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp TCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATTGGTTGGAAATGGCATaGTATAGGACCTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SIHTNWDGKKILSSWESNWLEMA*YRTWAL
Trigger: CAGAGCCCAGGTCCTATACCATGCCATTTCCAACCA...ATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp AATAACTCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAACAGGTGGTTGGAAATaGCATGGTATAGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: NNSIHTNWDGKKILSSWETGGWK*HGIGPG
Trigger: CCCAGGTCCTATACCATGCCATTTCCAACCACCTGT...TTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGAGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCACAGGTGGTTGGAAATaGCATGGTATAGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVTGGWK*HGIGPG
Trigger: CCCAGGTCCTATACCATGCCATTTCCAACCACCTGT...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp TCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATAATGAGGTGGTGCTCTaGTGTGTACAGGTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: SIHTNWDGKKILSSWESNNEVVL*CVQVVG
Trigger: TCCAACCACCTGTACACACCAGAGCACCACCTCATT...ATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCAATGAGGTGGTGCTCTaGTGTGTACAGGTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVNEVVL*CVQVVG
Trigger: TCCAACCACCTGTACACACCAGAGCACCACCTCATT...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTAATGAGGTGGTGCTCTaGTGTGTACAGGTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSNEVVL*CVQVVG
Trigger: TCCAACCACCTGTACACACCAGAGCACCACCTCATT...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp TTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAACATCACAATGGGTGGTaGGTCGAGCTCCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: FIQIGMGRKSFPLGKVIQHHNGW*VELHLL
Trigger: AAGGAGATGGAGCTCGACCCACCACCCATTGTGATG...TTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTAGCTTTGGGGAATTTTaGCCAGGAGACCCTTTACCC +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSSFGEF*PGDPLP
Trigger: GGGTAAAGGGTCTCCTGGCCAAAATTCCCCAAAGCT...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CCA 90 bp AATAACTCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGCTTTGGGGAATTTTaGCCAGGAGACCCTTTACCC +
Preference number: 4 (lower is better)
Translates to: NNSIHTNWDGKKILSSWESFGEF*PGDPLP
Trigger: GGGTAAAGGGTCTCCTGGCCAAAATTCCCCAAAGCT...TTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGAGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR TCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTTATACAAGTCGGGTTTaGGAAGCCCTAGTATCACCG +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSYTSRV*EALVSP
Trigger: CGGTGATACTAGGGCTTCTCAAACCCGACTTGTATA...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR TCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCTATACAAGTCGGGTTTaGGAAGCCCTAGTATCACCG +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVYTSRV*EALVSP
Trigger: CGGTGATACTAGGGCTTCTCAAACCCGACTTGTATA...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR GCA 90 bp TTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAACCATCTCCTTTCCAGTaGAGGGTTTTCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: FIQIGMGRKSFPLGKVIQPSPFQ*RVFSRM
Trigger: CATCCTGGAGAAAACCCTGCACTGGAAAGGAGATGG...TTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR GCA 90 bp TTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTAAGACCACAAGTCTaGAGGAAACTCTGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: FIQIGMGRKSFPLGKVIQVRPQV*RKLWAK
Trigger: CTTGGCCCAGAGTTTCCTGCAGACTTGTGGTCTTAC...TTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp TTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGCATGGTATAGGACCTaGGCTCTGTTATACTGGAGC +
Preference number: 4 (lower is better)
Translates to: FIQIGMGRKSFPLGKVIQAWYRT*ALLYWS
Trigger: GCTCCAGTATAACAGAGCCCAGGTCCTATACCATGC...TTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp ATTTGTGTTTTTATTATTTATGCCACGTCAGTGGGGCAAGAAATCTGGAGTGAGTCTGGTGTGTACAGGTaGTTGGAAATGGCATGGTAT +
Preference number: 4 (lower is better)
Translates to: ICVFIIYATSVGQEIWSESGVYR*LEMAWY
Trigger: ATACCATGCCATTTCCAACCACCTGTACACACCAGA...CTCACTCCAGATTTCTTGCCCCACTGACGTGGCATAAATAATAAAAACACAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp ATTTGTGTTTTTATTATTTATGCCACGTCAGTGGGGCAAGAAATCTGGAGTGAGCTCAGGTGTAAGGTTTaGATCCCTTGCTACATCACA +
Preference number: 4 (lower is better)
Translates to: ICVFIIYATSVGQEIWSELRCKV*IPCYIT
Trigger: TGTGATGTAGCAAGGGATCCAAACCTTACACCTGAG...CTCACTCCAGATTTCTTGCCCCACTGACGTGGCATAAATAATAAAAACACAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp TCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATTTTATGCCACGTCAGTaGGGCAAGAAATCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: SIHTNWDGKKILSSWESNFMPRQ*GKKSGV
Trigger: CACTCCAGATTTCTTGCCCCACTGACGTGGCATAAA...ATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTTTTATGCCACGTCAGTaGGGCAAGAAATCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSFMPRQ*GKKSGV
Trigger: CACTCCAGATTTCTTGCCCCACTGACGTGGCATAAA...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431156.7
ENST00000613904.1
CDS-3UTR TCA 90 bp AATAACTCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAGCTCCAAGCTGTGTGTaGTGGCAAAAATATAAACGG +
Preference number: 4 (lower is better)
Translates to: NNSIHTNWDGKKILSSWEAPSCV*WQKYKR
Trigger: CCGTTTATATTTTTGCCATCACACACAGCTTGGAGC...TTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGAGTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR TCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTGCTCCAAGCTGTGTGTaGTGGCAAAAATATAAACGG +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSAPSCV*WQKYKR
Trigger: CCGTTTATATTTTTGCCATCACACACAGCTTGGAGC...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR TCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCGCTCCAAGCTGTGTGTaGTGGCAAAAATATAAACGG +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVAPSCV*WQKYKR
Trigger: CCGTTTATATTTTTGCCATCACACACAGCTTGGAGC...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR TCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCTGTTGCAGAGTCCATaGGAAAACATGTTTGATGGC +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSLLQSP*ENMFDG
Trigger: GCCATCAAACATGTTTTCTCATGGACTCTGCAACAG...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR TCA 90 bp ATTTGTGTTTTTATTATTTATGCCACGTCAGTGGGGCAAGAAATCTGGAGTGAGGATAGTCATCTGAAATaGCCAATGATGCGGGAAGTA +
Preference number: 4 (lower is better)
Translates to: ICVFIIYATSVGQEIWSEDSHLK*PMMREV
Trigger: TACTTCCCGCATCATTGGTCATTTCAGATGACTATC...CTCACTCCAGATTTCTTGCCCCACTGACGTGGCATAAATAATAAAAACACAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp TCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATGACAGTGTAAAATCTTaGAGAAGGCCTGTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: SIHTNWDGKKILSSWESNDSVKS*RRPVQR
Trigger: CCTTTGGACAGGCCTTCTCCAAGATTTTACACTGTC...ATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTGACAGTGTAAAATCTTaGAGAAGGCCTGTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSDSVKS*RRPVQR
Trigger: CCTTTGGACAGGCCTTCTCCAAGATTTTACACTGTC...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCTCTGGTGTGTACAGGTaGTTGGAAATGGCATGGTAT +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVSGVYR*LEMAWY
Trigger: ATACCATGCCATTTCCAACCACCTGTACACACCAGA...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp AATAACTCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAACTCAGGTGTAAGGTTTaGATCCCTTGCTACATCACA +
Preference number: 4 (lower is better)
Translates to: NNSIHTNWDGKKILSSWELRCKV*IPCYIT
Trigger: TGTGATGTAGCAAGGGATCCAAACCTTACACCTGAG...TTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGAGTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp TCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATCTCAGGTGTAAGGTTTaGATCCCTTGCTACATCACA +
Preference number: 4 (lower is better)
Translates to: SIHTNWDGKKILSSWESNLRCKV*IPCYIT
Trigger: TGTGATGTAGCAAGGGATCCAAACCTTACACCTGAG...ATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCTCAGGTGTAAGGTTTaGATCCCTTGCTACATCACA +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSLRCKV*IPCYIT
Trigger: TGTGATGTAGCAAGGGATCCAAACCTTACACCTGAG...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR TCA 90 bp TTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAACTGTTGCAGAGTCCATaGGAAAACATGTTTGATGGC +
Preference number: 4 (lower is better)
Translates to: FIQIGMGRKSFPLGKVIQLLQSP*ENMFDG
Trigger: GCCATCAAACATGTTTTCTCATGGACTCTGCAACAG...TTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR TCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCGATAGTCATCTGAAATaGCCAATGATGCGGGAAGTA +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVDSHLK*PMMREV
Trigger: TACTTCCCGCATCATTGGTCATTTCAGATGACTATC...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR TCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTGCCAAGTATGTTGCATaGGAAGTTTTAGGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSAKYVA*EVLGFP
Trigger: TGGAAACCCTAAAACTTCTCATGCAACATACTTGGC...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR TCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCCTGCTGCACTTTTCTaGTATAGTTCACCACTTTTC +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSPAALF*YSSPLF
Trigger: GAAAAGTGGTGAACTATATCAGAAAAGTGCAGCAGG...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR TCA 90 bp TCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATCCTGCTGCACTTTTCTaGTATAGTTCACCACTTTTC +
Preference number: 4 (lower is better)
Translates to: SIHTNWDGKKILSSWESNPAALF*YSSPLF
Trigger: GAAAAGTGGTGAACTATATCAGAAAAGTGCAGCAGG...ATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR TCA 90 bp ATTTGTGTTTTTATTATTTATGCCACGTCAGTGGGGCAAGAAATCTGGAGTGAGGAAATCTGGAGTGAGTaGAGAAAGCTAAGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: ICVFIIYATSVGQEIWSEEIWSE*RKLSCE
Trigger: TTCACAACTTAGCTTTCTTCACTCACTCCAGATTTC...CTCACTCCAGATTTCTTGCCCCACTGACGTGGCATAAATAATAAAAACACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431156.7
ENST00000613904.1
CDS-3UTR TCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTGCAAGAAATCTGGAGTaGGTGAAGAAAGCTAAGTTG +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSARNLE*VKKAKL
Trigger: CAACTTAGCTTTCTTCACTCACTCCAGATTTCTTGC...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431156.7
ENST00000613904.1
CDS-3UTR GCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCCTGGGCCAAGTATGTTaGATGAGAAGTTTTAGGGTT +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVLGQVC*MRSFRV
Trigger: AACCCTAAAACTTCTCATGCAACATACTTGGCCCAG...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR GCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCTGGGCCAAGTATGTTaGATGAGAAGTTTTAGGGTT +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSLGQVC*MRSFRV
Trigger: AACCCTAAAACTTCTCATGCAACATACTTGGCCCAG...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR GCA 90 bp AATAACTCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAACTGGGCCAAGTATGTTaGATGAGAAGTTTTAGGGTT +
Preference number: 4 (lower is better)
Translates to: NNSIHTNWDGKKILSSWELGQVC*MRSFRV
Trigger: AACCCTAAAACTTCTCATGCAACATACTTGGCCCAG...TTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGAGTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp TTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGACAGTGTAAAATCTTaGAGAAGGCCTGTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: FIQIGMGRKSFPLGKVIQDSVKS*RRPVQR
Trigger: CCTTTGGACAGGCCTTCTCCAAGATTTTACACTGTC...TTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR TCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTATGAGAAAACATGTTTaGTGGCAGGGTTATTCTTCC +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSMRKHV*WQGYSS
Trigger: GGAAGAATAACCCTGCCATCAAACATGTTTTCTCAT...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR TCA 90 bp TTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGCCAAGTATGTTGCATaGGAAGTTTTAGGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: FIQIGMGRKSFPLGKVIQAKYVA*EVLGFP
Trigger: TGGAAACCCTAAAACTTCTCATGCAACATACTTGGC...TTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR TCA 90 bp TTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAACCTGCTGCACTTTTCTaGTATAGTTCACCACTTTTC +
Preference number: 4 (lower is better)
Translates to: FIQIGMGRKSFPLGKVIQPAALF*YSSPLF
Trigger: GAAAAGTGGTGAACTATATCAGAAAAGTGCAGCAGG...TTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR TCA 90 bp AATAACTCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAGAGAAACTTAACAGATaGGTTCTTGAATCTGGGATG +
Preference number: 4 (lower is better)
Translates to: NNSIHTNWDGKKILSSWEEKLNR*VLESGM
Trigger: CATCCCAGATTCAAGAACTCATCTGTTAAGTTTCTC...TTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGAGTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431156.7
ENST00000613904.1
CDS-3UTR GCA 90 bp TTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAACTGGGCCAAGTATGTTaGATGAGAAGTTTTAGGGTT +
Preference number: 4 (lower is better)
Translates to: FIQIGMGRKSFPLGKVIQLGQVC*MRSFRV
Trigger: AACCCTAAAACTTCTCATGCAACATACTTGGCCCAG...TTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp ATTTGTGTTTTTATTATTTATGCCACGTCAGTGGGGCAAGAAATCTGGAGTGAGACCTATCAAATTCTGTaGCTTCTATTAGATCACCGA +
Preference number: 4 (lower is better)
Translates to: ICVFIIYATSVGQEIWSETYQIL*LLLDHR
Trigger: TCGGTGATCTAATAGAAGCCACAGAATTTGATAGGT...CTCACTCCAGATTTCTTGCCCCACTGACGTGGCATAAATAATAAAAACACAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431156.7
ENST00000613904.1
CDS-3UTR TCA 90 bp TTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAATGAGAAAACATGTTTaGTGGCAGGGTTATTCTTCC +
Preference number: 4 (lower is better)
Translates to: FIQIGMGRKSFPLGKVIQMRKHV*WQGYSS
Trigger: GGAAGAATAACCCTGCCATCAAACATGTTTTCTCAT...TTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR GCA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTAAGGTTTGGATCCCTTaGTACATCACAAATCAGTTT +
Preference number: 4 (lower is better)
Translates to: HTNWDGKKILSSWESNTSKVWIP*YITNQF
Trigger: AAACTGATTTGTGATGTAGCAAGGGATCCAAACCTT...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CCA 90 bp TCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACCTATCAAATTCTGTaGCTTCTATTAGATCACCGA +
Preference number: 4 (lower is better)
Translates to: SIHTNWDGKKILSSWESNTYQIL*LLLDHR
Trigger: TCGGTGATCTAATAGAAGCCACAGAATTTGATAGGT...ATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCACCTATCAAATTCTGTaGCTTCTATTAGATCACCGA +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVTYQIL*LLLDHR
Trigger: TCGGTGATCTAATAGAAGCCACAGAATTTGATAGGT...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CCA 90 bp AATAACTCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAATCATACAAATTGGGATaGGAAGAAAATCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: NNSIHTNWDGKKILSSWESYKLG*EENPFL
Trigger: GAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGA...TTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGAGTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCTCATACAAATTGGGATaGGAAGAAAATCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVSYKLG*EENPFL
Trigger: GAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGA...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR TCA 90 bp TTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAATTCTTGAATCTGGGATaGGATGACGGATGTAAATAT +
Preference number: 4 (lower is better)
Translates to: FIQIGMGRKSFPLGKVIQFLNLG*DDGCKY
Trigger: ATATTTACATCCGTCATCTCATCCCAGATTCAAGAA...TTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431156.7
ENST00000613904.1
CDS-3UTR TCA 90 bp TTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAATTTATACCCAGGACTaGACATGCAGAACTGTTTTT +
Preference number: 4 (lower is better)
Translates to: FIQIGMGRKSFPLGKVIQIYTQD*TCRTVF
Trigger: AAAAACAGTTCTGCATGTTCAGTCCTGGGTATAAAT...TTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR GCA 90 bp TTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAAAGGTTTGGATCCCTTaGTACATCACAAATCAGTTT +
Preference number: 4 (lower is better)
Translates to: FIQIGMGRKSFPLGKVIQKVWIP*YITNQF
Trigger: AAACTGATTTGTGATGTAGCAAGGGATCCAAACCTT...TTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp TCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATTCCATTCATACAAATTaGGATGGGAAGAAAATCCTT +
Preference number: 4 (lower is better)
Translates to: SIHTNWDGKKILSSWESNSIHTN*DGKKIL
Trigger: AAGGATTTTCTTCCCATCCCAATTTGTATGAATGGA...ATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CCA 90 bp TTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAATCCATTCATACAAATTaGGATGGGAAGAAAATCCTT +
Preference number: 4 (lower is better)
Translates to: FIQIGMGRKSFPLGKVIQSIHTN*DGKKIL
Trigger: AAGGATTTTCTTCCCATCCCAATTTGTATGAATGGA...TTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS GCA 90 bp TCCTCCTTGGAGGGGGCTGCATACTTCTCCAGGGCTTTTGCTACCTaGCCCAGTGTCTCCGGCATTCCGCGGAGCCGTGCACCAGTCCCC +
Preference number: 5 (lower is better)
Translates to: SSLEGAAYFSRAFAT*PSVSGIPRSRAPVP
Trigger: GGGGACTGGTGCACGGCTCCGCGGAATGCCGGAGACACTGGGGCAGGTAGCAAAAGCCCTGGAGAAGTATGCAGCCCCCTCCAAGGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000523305.1
ENST00000613904.1
CDS GCA 90 bp CTGGGTGCACTGCAGAAGCCTGAGAGCGATTTGCTGTTTCGGGCCTaGCTCCCTCTGGTCCCGACCCTGCGGAGCTCTGGTGCCAAGAAA +
Preference number: 5 (lower is better)
Translates to: LGALQKPESDLLFRA*LPLVPTLRSSGAKK
Trigger: TTTCTTGGCACCAGAGCTCCGCAGGGTCGGGACCAGAGGGAGGCAGGCCCGAAACAGCAAATCGCTCTCAGGCTTCTGCAGTGCACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519356.1
CDS CCA 90 bp CCAGAGCGCTGTCAAGCTCCATTCCTGACTGCAGCACCAGAAGGCTaGTCTCTCCCACAGAACGAGGATGGAGGCGGGGAGGGATCCGTT +
Preference number: 5 (lower is better)
Translates to: PERCQAPFLTAAPEG*SLPQNEDGGGEGSV
Trigger: AACGGATCCCTCCCCGCCTCCATCCTCGTTCTGTGGGAGAGACCAGCCTTCTGGTGCTGCAGTCAGGAATGGAGCTTGACAGCGCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000523305.1
ENST00000613904.1
CDS TCA 90 bp CTGGTCTCTCCCACAGAACGAGGATGGAGGCGGGGAGGGATCCGTTaGAGAGGGAAGGAGCGATCACCCAAAGAGAACTGCAACGGCTCG +
Preference number: 5 (lower is better)
Translates to: LVSPTERGWRRGGIR*RGKERSPKENCNGS
Trigger: CGAGCCGTTGCAGTTCTCTTTGGGTGATCGCTCCTTCCCTCTTCAACGGATCCCTCCCCGCCTCCATCCTCGTTCTGTGGGAGAGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431156.7
CDS CCA 90 bp CATTGCCTCGTCGTGCCTCCGGGCGGGCAAGACAGTGTAAAATCTTaGAGAAGGCCTGTCCAAAGGCGGAGTGAGACAACTCCTCGGACA +
Preference number: 5 (lower is better)
Translates to: HCLVVPPGGQDSVKS*RRPVQRRSETTPRT
Trigger: TGTCCGAGGAGTTGTCTCACTCCGCCTTTGGACAGGCCTTCTCCAAGATTTTACACTGTCTTGCCCGCCCGGAGGCACGACGAGGCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000523305.1
ENST00000613904.1
CDS CCA 90 bp CCATGTGGGTCAGGATCAGCCGCAGGACCTCATCACAATGGGTGGTaGGTCGAGCTCCATCTCCTTTCCAGTGCAGGGTTTTCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: PCGSGSAAGPHHNGW*VELHLLSSAGFSPG
Trigger: TCCTGGAGAAAACCCTGCACTGGAAAGGAGATGGAGCTCGACCCACCACCCATTGTGATGAGGTCCTGCGGCTGATCCTGACCCACATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000519356.1
ENST00000520636.5
ENST00000613904.1
CDS CCA 90 bp GCTCCATGTGGGTCAGGATCAGCCGCAGGACCTCATCACAATGGGTaGTGGGTCGAGCTCCATCTCCTTTCCAGTGCAGGGTTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: APCGSGSAAGPHHNG*WVELHLLSSAGFSP
Trigger: TGGAGAAAACCCTGCACTGGAAAGGAGATGGAGCTCGACCCACCACCCATTGTGATGAGGTCCTGCGGCTGATCCTGACCCACATGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000519356.1
ENST00000520636.5
ENST00000613904.1
CDS CCA 90 bp TCTGGCTCCATGTGGGTCAGGATCAGCCGCAGGACCTCATCACAATaGGTGGTGGGTCGAGCTCCATCTCCTTTCCAGTGCAGGGTTTTC +
Preference number: 5 (lower is better)
Translates to: SGSMWVRISRRTSSQ*VVGRAPSPFQCRVF
Trigger: GAAAACCCTGCACTGGAAAGGAGATGGAGCTCGACCCACCACCCATTGTGATGAGGTCCTGCGGCTGATCCTGACCCACATGGAGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000519356.1
ENST00000520636.5
ENST00000613904.1
CDS CCA 90 bp TGCAGAAGCCTGAGAGCGATTTGCTGTTTCGGGCCTGCCTCCCTCTaGTCCCGACCCTGCGGAGCTCTGGTGCCAAGAAACTCAACTTTT +
Preference number: 5 (lower is better)
Translates to: CRSLRAICCFGPASL*SRPCGALVPRNSTF
Trigger: AAAAGTTGAGTTTCTTGGCACCAGAGCTCCGCAGGGTCGGGACCAGAGGGAGGCAGGCCCGAAACAGCAAATCGCTCTCAGGCTTCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519356.1
CDS GCA 90 bp TGGTTGCTCCAAGCTGTGTGTGATGGCAAAAATATAAACGGGTCCTaGCAAGTGATGCAGGCCCGTCTGCCATGCAGGGCCGACCAGGGA +
Preference number: 5 (lower is better)
Translates to: WLLQAVCDGKNINGS*QVMQARLPCRADQG
Trigger: TCCCTGGTCGGCCCTGCATGGCAGACGGGCCTGCATCACTTGGCAGGACCCGTTTATATTTTTGCCATCACACACAGCTTGGAGCAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS GCA 90 bp TCCCCAACCTGTTCACGAAAGCCGGCAGGTTTCTTGCGTAGGTCCTaGGTAAAAGAAGGCGGTGCTCTGGCTCCATGTGGGTCAGGATCA +
Preference number: 5 (lower is better)
Translates to: SPTCSRKPAGFLRRS*VKEGGALAPCGSGS
Trigger: TGATCCTGACCCACATGGAGCCAGAGCACCGCCTTCTTTTACGCAGGACCTACGCAAGAAACCTGCCGGCTTTCGTGAACAGGTTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000519356.1
ENST00000520636.5
ENST00000613904.1
CDS TCA 90 bp CTTCCCGAGATCTCGGAGTGGTCCATGGTTGCTCCAAGCTGTGTGTaGTGGCAAAAATATAAACGGGTCCTGCCAAGTGATGCAGGCCCG +
Preference number: 5 (lower is better)
Translates to: LPEISEWSMVAPSCV*WQKYKRVLPSDAGP
Trigger: CGGGCCTGCATCACTTGGCAGGACCCGTTTATATTTTTGCCATCACACACAGCTTGGAGCAACCATGGACCACTCCGAGATCTCGGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS TCA 90 bp CTGGTCTCTCCCACAGAACGAGGATGGAGGCGGGGAGGGATCCGTTaGAGAGGGAAGGAGCGATCACCCAAAGAGAAACTTTTAACAGTG +
Preference number: 5 (lower is better)
Translates to: LVSPTERGWRRGGIR*RGKERSPKEKLLTV
Trigger: CACTGTTAAAAGTTTCTCTTTGGGTGATCGCTCCTTCCCTCTTCAACGGATCCCTCCCCGCCTCCATCCTCGTTCTGTGGGAGAGACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523305.1
ENST00000613904.1
CDS GCA 90 bp ACCTCATCACAATGGGTGGTGGGTCGAGCTCCATCTCCTTTCCAGTaGAGGGTTTTCTCCAGGATGGGGAATAAATCCAGCAGACACAGG +
Preference number: 5 (lower is better)
Translates to: TSSQWVVGRAPSPFQ*RVFSRMGNKSSRHR
Trigger: CCTGTGTCTGCTGGATTTATTCCCCATCCTGGAGAAAACCCTGCACTGGAAAGGAGATGGAGCTCGACCCACCACCCATTGTGATGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000519356.1
ENST00000520636.5
ENST00000613904.1
CDS CCA 90 bp GGTGAGCACCTCCCTAGCAACTTCCCGAGATCTCGGAGTGGTCCATaGTTGCTCCAAGCTGTGTGTGATGGCAAAAATATAAACGGGTCC +
Preference number: 5 (lower is better)
Translates to: GEHLPSNFPRSRSGP*LLQAVCDGKNINGS
Trigger: GGACCCGTTTATATTTTTGCCATCACACACAGCTTGGAGCAACCATGGACCACTCCGAGATCTCGGGAAGTTGCTAGGGAGGTGCTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CAA 90 bp AGAGCCCGTGGCCAAAGCCAAAACCACGTGATTTCCCTTTCAGCATTTATACCCACCCTTTACCCGTCCTaGAGAACAGCGGTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: RARGQSQNHVISLSAFIPTLYPS*RTAVQE
Trigger: CTCCTGGACCGCTGTTCTCAAGGACGGGTAAAGGGT...GGGTATAAATGCTGAAAGGGAAATCACGTGGTTTTGGCTTTGGCCACGGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR CAA 90 bp CGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGGCCAAAGCCTCTGTCTTCACAGCTTaGGGGAATTTTGGCCAGGAG +
Preference number: 5 (lower is better)
Translates to: RAYVEIEYEQETEPVAKASVFTA*GNFGQE
Trigger: CTCCTGGCCAAAATTCCCCAAAGCTGTGAAGACAGA...GGCTTTGGCCACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS CCA 90 bp GCAGTCTCAACTTTCCCTAACAGTTTAAGAAACAGTAACCCAACTTaGGCTGCTTTCTCGGCCGCTTCGGAGTGCCCATCACCTCCACCT +
Preference number: 5 (lower is better)
Translates to: AVSTFPNSLRNSNPT*AAFSAASECPSPPP
Trigger: AGGTGGAGGTGATGGGCACTCCGAAGCGGCCGAGAAAGCAGCCCAAGTTGGGTTACTGTTTCTTAAACTGTTAGGGAAAGTTGAGACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS CCA 90 bp TCATCTGAAATGACCAATGATGCGGGAAGTACCCTTTCCAGATGCTaGCTCAGCCAGGGCCGAGTGACCTGTTGCAGAGTCCATGAGAAA +
Preference number: 5 (lower is better)
Translates to: SSEMTNDAGSTLSRC*LSQGRVTCCRVHEK
Trigger: TTTCTCATGGACTCTGCAACAGGTCACTCGGCCCTGGCTGAGCCAGCATCTGGAAAGGGTACTTCCCGCATCATTGGTCATTTCAGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS CCA 90 bp GCTGTTTCGGGCCTGCCTCCCTCTGGTCCCGACCCTGCGGAGCTCTaGTGCCAAGAAACTCAACTTTTCTATGAAAACAGGTTGATAATA +
Preference number: 5 (lower is better)
Translates to: AVSGLPPSGPDPAEL*CQETQLFYENRLII
Trigger: TATTATCAACCTGTTTTCATAGAAAAGTTGAGTTTCTTGGCACCAGAGCTCCGCAGGGTCGGGACCAGAGGGAGGCAGGCCCGAAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519356.1
CDS-3UTR CAA 90 bp CAGAGAAAACGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGACTGCATCTTTTACATaGCCTCGTCGTGCCTCCGGG +
Preference number: 5 (lower is better)
Translates to: QRKRAYVEIEYEQETEPVTASFT*PRRASG
Trigger: CCCGGAGGCACGACGAGGCAATGTAAAAGATGCAGT...CACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCGTTTTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS TCA 90 bp GCAAGACAGTGTAAAATCTTGGAGAAGGCCTGTCCAAAGGCGGAGTaGGACAACTCCTCGGACAAATTAGAGTCTTCCTGCGATGGGGCT +
Preference number: 5 (lower is better)
Translates to: ARQCKILEKACPKAE*DNSSDKLESSCDGA
Trigger: AGCCCCATCGCAGGAAGACTCTAATTTGTCCGAGGAGTTGTCTCACTCCGCCTTTGGACAGGCCTTCTCCAAGATTTTACACTGTCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000523305.1
ENST00000613904.1
CDS TCA 90 bp CAGATGCTGGCTCAGCCAGGGCCGAGTGACCTGTTGCAGAGTCCATaGGAAAACATGTTTGATGGCAGGGTTATTCTTCCAGGATTCCTT +
Preference number: 5 (lower is better)
Translates to: QMLAQPGPSDLLQSP*ENMFDGRVILPGFL
Trigger: AAGGAATCCTGGAAGAATAACCCTGCCATCAAACATGTTTTCTCATGGACTCTGCAACAGGTCACTCGGCCCTGGCTGAGCCAGCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS TCA 90 bp TTTTCTCCATGTAGGAATCCTGCCACAGAACCGCATTCAGTAACTTaGAGCAGTGAGGTGAGCACCTCCCTAGCAACTTCCCGAGATCTC +
Preference number: 5 (lower is better)
Translates to: FSPCRNPATEPHSVT*SSEVSTSLATSRDL
Trigger: GAGATCTCGGGAAGTTGCTAGGGAGGTGCTCACCTCACTGCTTCAAGTTACTGAATGCGGTTCTGTGGCAGGATTCCTACATGGAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CAA 90 bp AGAGCCCGTGGCCAAAGCCAAAACCACGTGATTTCCCTTTCAGCATTTATACCCGGTGTGTACAGGTGGTaGGAAATGGCATGGTATAGG +
Preference number: 5 (lower is better)
Translates to: RARGQSQNHVISLSAFIPGVYRW*EMAWYR
Trigger: CCTATACCATGCCATTTCCAACCACCTGTACACACC...GGGTATAAATGCTGAAAGGGAAATCACGTGGTTTTGGCTTTGGCCACGGGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS GCA 90 bp GACTTCCCATCATCCAGACTGGGAGCAGTGGAGTTCCGTTGTTCATaGATTACCCAAACTAAGGTGTGTTGTGATAGTAGCCCAAACGGA +
Preference number: 5 (lower is better)
Translates to: DFPSSRLGAVEFRCS*ITQTKVCCDSSPNG
Trigger: TCCGTTTGGGCTACTATCACAACACACCTTAGTTTGGGTAATGCATGAACAACGGAACTCCACTGCTCCCAGTCTGGATGATGGGAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519356.1
CDS-3UTR CAA 90 bp GAGAAAACGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGGCAGACAGTGTAAAATCTaGGAGAAGGCCTGTCCAAAG +
Preference number: 5 (lower is better)
Translates to: EKTSLCGNRIRAGDRARGRQCKI*EKACPK
Trigger: CTTTGGACAGGCCTTCTCCAAGATTTTACACTGTCT...GCCACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCGTTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS TCA 90 bp AGTGTACACCCAGGATTTTGTTCTCAGTCTGATAGTCATCTGAAATaGCCAATGATGCGGGAAGTACCCTTTCCAGATGCTGGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: SVHPGFCSQSDSHLK*PMMREVPFPDAGSA
Trigger: GGCTGAGCCAGCATCTGGAAAGGGTACTTCCCGCATCATTGGTCATTTCAGATGACTATCAGACTGAGAACAAAATCCTGGGTGTACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CAA 90 bp AGAGCCCGTGGCCAAAGCCAAAACCACGTGATTTCCCTTTCAGCATTTATACCCTTATACAAGTCGGGTTaGAGAAGCCCTAGTATCACC +
Preference number: 5 (lower is better)
Translates to: RARGQSQNHVISLSAFIPLYKSG*RSPSIT
Trigger: GGTGATACTAGGGCTTCTCAAACCCGACTTGTATAA...GGGTATAAATGCTGAAAGGGAAATCACGTGGTTTTGGCTTTGGCCACGGGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR CAA 90 bp CAAAGCCAAAACCACGTGATTTCCCTTTCAGCATTTATACCCAGGACTGAACATAAGCCGGCAGGTTTCTaGCGTAGGTCCTGCGTAAAA +
Preference number: 5 (lower is better)
Translates to: QSQNHVISLSAFIPRTEHKPAGF*RRSCVK
Trigger: TTTTACGCAGGACCTACGCAAGAAACCTGCCGGCTT...ATGTTCAGTCCTGGGTATAAATGCTGAAAGGGAAATCACGTGGTTTTGGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR CAA 90 bp ATTTGTGTTTTTATTATTTATGCCACGTCAGTGGGGCAAGAAATCTGGAGTGAGACTTCTCCAGGGCTTTaGCTACCTGCCCCAGTGTCT +
Preference number: 5 (lower is better)
Translates to: ICVFIIYATSVGQEIWSETSPGL*LPAPVS
Trigger: AGACACTGGGGCAGGTAGCAAAAGCCCTGGAGAAGT...CTCACTCCAGATTTCTTGCCCCACTGACGTGGCATAAATAATAAAAACACAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CAA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCACCCTTTACCCGTCCTaGAGAACAGCGGTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVTLYPS*RTAVQE
Trigger: CTCCTGGACCGCTGTTCTCAAGGACGGGTAAAGGGT...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CAA 90 bp AGAAAACGAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGGCCCCAGTTTTTGCTCTTTaGTGTTGTACTGAACACAAT +
Preference number: 5 (lower is better)
Translates to: RKRAYVEIEYEQETEPVAPVFAL*CCTEHN
Trigger: ATTGTGTTCAGTACAACACAAAAGAGCAAAAACTGG...GGCCACGGGCTCTGTCTCCTGCTCGTATTCTATTTCCACATAGGCTCGTTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS-3UTR CAA 90 bp TCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACTGCATCTTTTACATaGCCTCGTCGTGCCTCCGGG +
Preference number: 5 (lower is better)
Translates to: SIHTNWDGKKILSSWESNTASFT*PRRASG
Trigger: CCCGGAGGCACGACGAGGCAATGTAAAAGATGCAGT...ATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CAA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTACTGCATCTTTTACATaGCCTCGTCGTGCCTCCGGG +
Preference number: 5 (lower is better)
Translates to: HTNWDGKKILSSWESNTSTASFT*PRRASG
Trigger: CCCGGAGGCACGACGAGGCAATGTAAAAGATGCAGT...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CAA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCACTTCTCCAGGGCTTTaGCTACCTGCCCCAGTGTCT +
Preference number: 5 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVTSPGL*LPAPVS
Trigger: AGACACTGGGGCAGGTAGCAAAAGCCCTGGAGAAGT...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CAA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCGGAGTGGTCCATGGTaGCTCCAAGCTGTGTGTGAT +
Preference number: 5 (lower is better)
Translates to: HTNWDGKKILSSWESNTSRSGPW*LQAVCD
Trigger: ATCACACACAGCTTGGAGCAACCATGGACCACTCCG...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CAA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCCGGAGTGGTCCATGGTaGCTCCAAGCTGTGTGTGAT +
Preference number: 5 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVRSGPW*LQAVCD
Trigger: ATCACACACAGCTTGGAGCAACCATGGACCACTCCG...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CAA 90 bp TCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATCGGAGTGGTCCATGGTaGCTCCAAGCTGTGTGTGAT +
Preference number: 5 (lower is better)
Translates to: SIHTNWDGKKILSSWESNRSGPW*LQAVCD
Trigger: ATCACACACAGCTTGGAGCAACCATGGACCACTCCG...ATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CAA 90 bp TTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAACCCTTTACCCGTCCTaGAGAACAGCGGTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: FIQIGMGRKSFPLGKVIQTLYPS*RTAVQE
Trigger: CTCCTGGACCGCTGTTCTCAAGGACGGGTAAAGGGT...TTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CAA 90 bp TTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAAAACAGAGAGATGTCTaGGAGGAGGGGGCGAGTCTG +
Preference number: 5 (lower is better)
Translates to: FIQIGMGRKSFPLGKVIQKQRDV*EEGASL
Trigger: CAGACTCGCCCCCTCCTCCAAGACATCTCTCTGTTT...TTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000360742.9
CDS-3UTR CAA 90 bp TTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAACTGCATCTTTTACATaGCCTCGTCGTGCCTCCGGG +
Preference number: 5 (lower is better)
Translates to: FIQIGMGRKSFPLGKVIQTASFT*PRRASG
Trigger: CCCGGAGGCACGACGAGGCAATGTAAAAGATGCAGT...TTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CAA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCAAGCCGGCAGGTTTCTaGCGTAGGTCCTGCGTAAAA +
Preference number: 5 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVKPAGF*RRSCVK
Trigger: TTTTACGCAGGACCTACGCAAGAAACCTGCCGGCTT...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CAA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCAGCTTTGGGGAATTTaGGCCAGGAGACCCTTTACC +
Preference number: 5 (lower is better)
Translates to: HTNWDGKKILSSWESNTSQLWGI*ARRPFT
Trigger: GGTAAAGGGTCTCCTGGCCAAAATTCCCCAAAGCTG...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CAA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCCAGCTTTGGGGAATTTaGGCCAGGAGACCCTTTACC +
Preference number: 5 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVQLWGI*ARRPFT
Trigger: GGTAAAGGGTCTCCTGGCCAAAATTCCCCAAAGCTG...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CAA 90 bp AATAACTCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAGGTGTGTACAGGTGGTaGGAAATGGCATGGTATAGG +
Preference number: 5 (lower is better)
Translates to: NNSIHTNWDGKKILSSWEGVYRW*EMAWYR
Trigger: CCTATACCATGCCATTTCCAACCACCTGTACACACC...TTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGAGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CAA 90 bp TTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAACAGCTTTGGGGAATTTaGGCCAGGAGACCCTTTACC +
Preference number: 5 (lower is better)
Translates to: FIQIGMGRKSFPLGKVIQQLWGI*ARRPFT
Trigger: GGTAAAGGGTCTCCTGGCCAAAATTCCCCAAAGCTG...TTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CAA 90 bp AATAACTCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAATCTGTCTTCACAGCTTaGGGGAATTTTGGCCAGGAG +
Preference number: 5 (lower is better)
Translates to: NNSIHTNWDGKKILSSWESVFTA*GNFGQE
Trigger: CTCCTGGCCAAAATTCCCCAAAGCTGTGAAGACAGA...TTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGAGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CAA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCTCTGTCTTCACAGCTTaGGGGAATTTTGGCCAGGAG +
Preference number: 5 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVSVFTA*GNFGQE
Trigger: CTCCTGGCCAAAATTCCCCAAAGCTGTGAAGACAGA...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CAA 90 bp TCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATAGACAGTGTAAAATCTaGGAGAAGGCCTGTCCAAAG +
Preference number: 5 (lower is better)
Translates to: SIHTNWDGKKILSSWESNRQCKI*EKACPK
Trigger: CTTTGGACAGGCCTTCTCCAAGATTTTACACTGTCT...ATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CAA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTAGACAGTGTAAAATCTaGGAGAAGGCCTGTCCAAAG +
Preference number: 5 (lower is better)
Translates to: HTNWDGKKILSSWESNTSRQCKI*EKACPK
Trigger: CTTTGGACAGGCCTTCTCCAAGATTTTACACTGTCT...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CAA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCAGACAGTGTAAAATCTaGGAGAAGGCCTGTCCAAAG +
Preference number: 5 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVRQCKI*EKACPK
Trigger: CTTTGGACAGGCCTTCTCCAAGATTTTACACTGTCT...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CAA 90 bp ATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTCTTATACAAGTCGGGTTaGAGAAGCCCTAGTATCACC +
Preference number: 5 (lower is better)
Translates to: IQIGMGRKSFPLGKVIQVLYKSG*RSPSIT
Trigger: GGTGATACTAGGGCTTCTCAAACCCGACTTGTATAA...GACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CAA 90 bp AATAACTCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAATTATACAAGTCGGGTTaGAGAAGCCCTAGTATCACC +
Preference number: 5 (lower is better)
Translates to: NNSIHTNWDGKKILSSWELYKSG*RSPSIT
Trigger: GGTGATACTAGGGCTTCTCAAACCCGACTTGTATAA...TTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGAGTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000613904.1
CDS-3UTR CAA 90 bp CATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACAAGTTTATACAAGTCGGGTTaGAGAAGCCCTAGTATCACC +
Preference number: 5 (lower is better)
Translates to: HTNWDGKKILSSWESNTSLYKSG*RSPSIT
Trigger: GGTGATACTAGGGCTTCTCAAACCCGACTTGTATAA...ACTTGTATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS-3UTR CAA 90 bp TCCATTCATACAAATTGGGATGGGAAGAAAATCCTTTCCTCTTGGGAAAGTAATACACACCTCCAGTTTTaGCTCTTTTGTGTTGTACTG +
Preference number: 5 (lower is better)
Translates to: SIHTNWDGKKILSSWESNTHLQF*LFCVVL
Trigger: CAGTACAACACAAAAGAGCAAAAACTGGAGGTGTGT...ATTACTTTCCCAAGAGGAAAGGATTTTCTTCCCATCCCAATTTGTATGAATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613904.1
CDS TCA 90 bp TCAAAGTCATTTATTCAAGAAAAGATTGTACTGGTTGCTATGGTGTaGATGTTTGTACCCTGCCCCAAATTCATATGTGAATTTCGTGCC +
Preference number: 5 (lower is better)
Translates to: SKSFIQEKIVLVAMV*MFVPCPKFICEFRA
Trigger: GGCACGAAATTCACATATGAATTTGGGGCAGGGTACAAACATTCACACCATAGCAACCAGTACAATCTTTTCTTGAATAAATGACTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519356.1
CDS CAA 90 bp GGGTGTCCTGCAGTGCTGGGTGCACTGCAGAAGCCTGAGAGCGATTaGCTGTTTCGGGCCTGCCTCCCTCTGGTCCCGACCCTGCGGAGC +
Preference number: 6 (lower is better)
Translates to: GCPAVLGALQKPESD*LFRACLPLVPTLRS
Trigger: GCTCCGCAGGGTCGGGACCAGAGGGAGGCAGGCCCGAAACAGCAAATCGCTCTCAGGCTTCTGCAGTGCACCCAGCACTGCAGGACACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519356.1
CDS GCA 72 bp GAGGGGGCTGCATACTTCTCCAGGGCTTTTGCTACCTaGCCCAGTGTCTCCGGCATTCCGCGGAGCCGTGCA +
Preference number: 6 (lower is better)
Translates to: EGAAYFSRAFAT*PSVSGIPRSRA
Trigger: TGCACGGCTCCGCGGAATGCCGGAGACACTGGGGCAGGTAGCAAAAGCCCTGGAGAAGTATGCAGCCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000523305.1
ENST00000613904.1
CDS GCA 72 bp CTGCAGAAGCCTGAGAGCGATTTGCTGTTTCGGGCCTaGCTCCCTCTGGTCCCGACCCTGCGGAGCTCTGGT +
Preference number: 6 (lower is better)
Translates to: LQKPESDLLFRA*LPLVPTLRSSG
Trigger: ACCAGAGCTCCGCAGGGTCGGGACCAGAGGGAGGCAGGCCCGAAACAGCAAATCGCTCTCAGGCTTCTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519356.1
CDS CAA 72 bp GCAGTGCTGGGTGCACTGCAGAAGCCTGAGAGCGATTaGCTGTTTCGGGCCTGCCTCCCTCTGGTCCCGACC +
Preference number: 6 (lower is better)
Translates to: AVLGALQKPESD*LFRACLPLVPT
Trigger: GGTCGGGACCAGAGGGAGGCAGGCCCGAAACAGCAAATCGCTCTCAGGCTTCTGCAGTGCACCCAGCACTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519356.1
CDS CCA 72 bp CTGAGAGCGATTTGCTGTTTCGGGCCTGCCTCCCTCTaGTCCCGACCCTGCGGAGCTCTGGTGCCAAGAAAC +
Preference number: 6 (lower is better)
Translates to: LRAICCFGPASL*SRPCGALVPRN
Trigger: GTTTCTTGGCACCAGAGCTCCGCAGGGTCGGGACCAGAGGGAGGCAGGCCCGAAACAGCAAATCGCTCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519356.1
CDS CCA 72 bp GGGTCAGGATCAGCCGCAGGACCTCATCACAATGGGTaGTGGGTCGAGCTCCATCTCCTTTCCAGTGCAGGG +
Preference number: 6 (lower is better)
Translates to: GSGSAAGPHHNG*WVELHLLSSAG
Trigger: CCCTGCACTGGAAAGGAGATGGAGCTCGACCCACCACCCATTGTGATGAGGTCCTGCGGCTGATCCTGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000519356.1
ENST00000520636.5
ENST00000613904.1
CDS TCA 72 bp CCCACAGAACGAGGATGGAGGCGGGGAGGGATCCGTTaGAGAGGGAAGGAGCGATCACCCAAAGAGAACTGC +
Preference number: 6 (lower is better)
Translates to: PTERGWRRGGIR*RGKERSPKENC
Trigger: GCAGTTCTCTTTGGGTGATCGCTCCTTCCCTCTTCAACGGATCCCTCCCCGCCTCCATCCTCGTTCTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431156.7
CDS GCA 72 bp AACGGGTCCTGCCAAGTGATGCAGGCCCGTCTGCCATaGAGGGCCGACCAGGGAATTCTTAGCAGTCTCAAC +
Preference number: 6 (lower is better)
Translates to: NGSCQVMQARLP*RADQGILSSLN
Trigger: GTTGAGACTGCTAAGAATTCCCTGGTCGGCCCTGCATGGCAGACGGGCCTGCATCACTTGGCAGGACCCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS GCA 72 bp TGCTGTTTCGGGCCTGCCTCCCTCTGGTCCCGACCCTaGGGAGCTCTGGTGCCAAGAAACTCAACTTTTCTA +
Preference number: 6 (lower is better)
Translates to: CCFGPASLWSRP*GALVPRNSTFL
Trigger: TAGAAAAGTTGAGTTTCTTGGCACCAGAGCTCCGCAGGGTCGGGACCAGAGGGAGGCAGGCCCGAAACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519356.1
CDS GCA 72 bp AAATCTGAGGAGGTGCTGACCCTGGGTGTCCTGCAGTaGTGGGTGCACTGCAGAAGCCTGAGAGCGATTTGC +
Preference number: 6 (lower is better)
Translates to: KSEEVLTLGVLQ*WVHCRSLRAIC
Trigger: GCAAATCGCTCTCAGGCTTCTGCAGTGCACCCAGCACTGCAGGACACCCAGGGTCAGCACCTCCTCAGATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519356.1
CDS CCA 72 bp ATGTGGGTCAGGATCAGCCGCAGGACCTCATCACAATaGGTGGTGGGTCGAGCTCCATCTCCTTTCCAGTGC +
Preference number: 6 (lower is better)
Translates to: MWVRISRRTSSQ*VVGRAPSPFQC
Trigger: GCACTGGAAAGGAGATGGAGCTCGACCCACCACCCATTGTGATGAGGTCCTGCGGCTGATCCTGACCCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000519356.1
ENST00000520636.5
ENST00000613904.1
CDS CCA 72 bp GTCCTGCGTAAAAGAAGGCGGTGCTCTGGCTCCATGTaGGTCAGGATCAGCCGCAGGACCTCATCACAATGG +
Preference number: 6 (lower is better)
Translates to: VLRKRRRCSGSM*VRISRRTSSQW
Trigger: CCATTGTGATGAGGTCCTGCGGCTGATCCTGACCCACATGGAGCCAGAGCACCGCCTTCTTTTACGCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000519356.1
ENST00000520636.5
ENST00000613904.1
CDS TCA 72 bp CCCACAGAACGAGGATGGAGGCGGGGAGGGATCCGTTaGAGAGGGAAGGAGCGATCACCCAAAGAGAAACTT +
Preference number: 6 (lower is better)
Translates to: PTERGWRRGGIR*RGKERSPKEKL
Trigger: AAGTTTCTCTTTGGGTGATCGCTCCTTCCCTCTTCAACGGATCCCTCCCCGCCTCCATCCTCGTTCTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523305.1
ENST00000613904.1
CDS GCA 72 bp TGTTCACGAAAGCCGGCAGGTTTCTTGCGTAGGTCCTaGGTAAAAGAAGGCGGTGCTCTGGCTCCATGTGGG +
Preference number: 6 (lower is better)
Translates to: CSRKPAGFLRRS*VKEGGALAPCG
Trigger: CCCACATGGAGCCAGAGCACCGCCTTCTTTTACGCAGGACCTACGCAAGAAACCTGCCGGCTTTCGTGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000519356.1
ENST00000520636.5
ENST00000613904.1
CDS CCA 72 bp GGCCTGCCTCCCTCTGGTCCCGACCCTGCGGAGCTCTaGTGCCAAGAAACTCAACTTTTCTATGAAAACAGG +
Preference number: 6 (lower is better)
Translates to: GLPPSGPDPAEL*CQETQLFYENR
Trigger: CCTGTTTTCATAGAAAAGTTGAGTTTCTTGGCACCAGAGCTCCGCAGGGTCGGGACCAGAGGGAGGCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519356.1
CDS CAA 72 bp GGATCCCCAACCTGTTCACGAAAGCCGGCAGGTTTCTaGCGTAGGTCCTGCGTAAAAGAAGGCGGTGCTCTG +
Preference number: 6 (lower is better)
Translates to: GSPTCSRKPAGF*RRSCVKEGGAL
Trigger: CAGAGCACCGCCTTCTTTTACGCAGGACCTACGCAAGAAACCTGCCGGCTTTCGTGAACAGGTTGGGGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000519356.1
ENST00000520636.5
ENST00000613904.1
CDS CAA 90 bp GGACAGTTAGGATCCCCAACCTGTTCACGAAAGCCGGCAGGTTTCTaGCGTAGGTCCTGCGTAAAAGAAGGCGGTGCTCTGGCTCCATGT +
Preference number: 6 (lower is better)
Translates to: GQLGSPTCSRKPAGF*RRSCVKEGGALAPC
Trigger: ACATGGAGCCAGAGCACCGCCTTCTTTTACGCAGGACCTACGCAAGAAACCTGCCGGCTTTCGTGAACAGGTTGGGGATCCTAACTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000519356.1
ENST00000520636.5
ENST00000613904.1
CDS TCA 72 bp AATGAGGTACTTAGGGCTCAAAATCTGAGGAGGTGCTaGCCCTGGGTGTCCTGCAGTGCTGGGTGCACTGCA +
Preference number: 6 (lower is better)
Translates to: NEVLRAQNLRRC*PWVSCSAGCTA
Trigger: TGCAGTGCACCCAGCACTGCAGGACACCCAGGGTCAGCACCTCCTCAGATTTTGAGCCCTAAGTACCTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519356.1
CDS TCA 72 bp AGGGCAAGGCAAATGAGGTACTTAGGGCTCAAAATCTaGGGAGGTGCTGACCCTGGGTGTCCTGCAGTGCTG +
Preference number: 6 (lower is better)
Translates to: RARQMRYLGLKI*GGADPGCPAVL
Trigger: CAGCACTGCAGGACACCCAGGGTCAGCACCTCCTCAGATTTTGAGCCCTAAGTACCTCATTTGCCTTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519356.1
CDS GCA 72 bp GAAATGACCAATGATGCGGGAAGTACCCTTTCCAGATaGTGGCTCAGCCAGGGCCGAGTGACCTGTTGCAGA +
Preference number: 6 (lower is better)
Translates to: EMTNDAGSTLSR*WLSQGRVTCCR
Trigger: TCTGCAACAGGTCACTCGGCCCTGGCTGAGCCAGCATCTGGAAAGGGTACTTCCCGCATCATTGGTCATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS CAA 90 bp GAGCACCTCCCTAGCAACTTCCCGAGATCTCGGAGTGGTCCATGGTaGCTCCAAGCTGTGTGTGATGGCAAAAATATAAACGGGTCCTGC +
Preference number: 6 (lower is better)
Translates to: EHLPSNFPRSRSGPW*LQAVCDGKNINGSC
Trigger: GCAGGACCCGTTTATATTTTTGCCATCACACACAGCTTGGAGCAACCATGGACCACTCCGAGATCTCGGGAAGTTGCTAGGGAGGTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS CAA 72 bp AGATCACCGAGGTCTTTAAGAACTGCATCTTTTACATaGCCTCGTCGTGCCTCCGGGCGGGCAAGACAGTGT +
Preference number: 6 (lower is better)
Translates to: RSPRSLRTASFT*PRRASGRARQC
Trigger: ACACTGTCTTGCCCGCCCGGAGGCACGACGAGGCAATGTAAAAGATGCAGTTCTTAAAGACCTCGGTGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000523305.1
ENST00000613904.1
CDS TCA 72 bp TGTAGGAATCCTGCCACAGAACCGCATTCAGTAACTTaGAGCAGTGAGGTGAGCACCTCCCTAGCAACTTCC +
Preference number: 6 (lower is better)
Translates to: CRNPATEPHSVT*SSEVSTSLATS
Trigger: GGAAGTTGCTAGGGAGGTGCTCACCTCACTGCTTCAAGTTACTGAATGCGGTTCTGTGGCAGGATTCCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS TCA 72 bp GCTCAGCCAGGGCCGAGTGACCTGTTGCAGAGTCCATaGGAAAACATGTTTGATGGCAGGGTTATTCTTCCA +
Preference number: 6 (lower is better)
Translates to: AQPGPSDLLQSP*ENMFDGRVILP
Trigger: TGGAAGAATAACCCTGCCATCAAACATGTTTTCTCATGGACTCTGCAACAGGTCACTCGGCCCTGGCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS CCA 72 bp ACTTTCCCTAACAGTTTAAGAAACAGTAACCCAACTTaGGCTGCTTTCTCGGCCGCTTCGGAGTGCCCATCA +
Preference number: 6 (lower is better)
Translates to: TFPNSLRNSNPT*AAFSAASECPS
Trigger: TGATGGGCACTCCGAAGCGGCCGAGAAAGCAGCCCAAGTTGGGTTACTGTTTCTTAAACTGTTAGGGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS CCA 72 bp CTCCCTAGCAACTTCCCGAGATCTCGGAGTGGTCCATaGTTGCTCCAAGCTGTGTGTGATGGCAAAAATATA +
Preference number: 6 (lower is better)
Translates to: LPSNFPRSRSGP*LLQAVCDGKNI
Trigger: TATATTTTTGCCATCACACACAGCTTGGAGCAACCATGGACCACTCCGAGATCTCGGGAAGTTGCTAGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS CCA 72 bp TGGTGCTCTGGTGTGTACAGGTGGTTGGAAATGGCATaGTATAGGACCTGGGCTCTGTTATACTGGAGCAAA +
Preference number: 6 (lower is better)
Translates to: WCSGVYRWLEMA*YRTWALLYWSK
Trigger: TTTGCTCCAGTATAACAGAGCCCAGGTCCTATACCATGCCATTTCCAACCACCTGTACACACCAGAGCACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000519356.1
ENST00000613904.1
CDS CAA 90 bp AGCCAGGGCCGAGTGACCTGTTGCAGAGTCCATGAGAAAACATGTTaGATGGCAGGGTTATTCTTCCAGGATTCCTTATACAAGTCGGGT +
Preference number: 6 (lower is better)
Translates to: SQGRVTCCRVHEKTC*MAGLFFQDSLYKSG
Trigger: ACCCGACTTGTATAAGGAATCCTGGAAGAATAACCCTGCCATCAAACATGTTTTCTCATGGACTCTGCAACAGGTCACTCGGCCCTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS TCA 72 bp TGTAAAATCTTGGAGAAGGCCTGTCCAAAGGCGGAGTaGGACAACTCCTCGGACAAATTAGAGTCTTCCTGC +
Preference number: 6 (lower is better)
Translates to: CKILEKACPKAE*DNSSDKLESSC
Trigger: GCAGGAAGACTCTAATTTGTCCGAGGAGTTGTCTCACTCCGCCTTTGGACAGGCCTTCTCCAAGATTTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000523305.1
ENST00000613904.1
CDS TCA 72 bp ATCTCGGAGTGGTCCATGGTTGCTCCAAGCTGTGTGTaGTGGCAAAAATATAAACGGGTCCTGCCAAGTGAT +
Preference number: 6 (lower is better)
Translates to: ISEWSMVAPSCV*WQKYKRVLPSD
Trigger: ATCACTTGGCAGGACCCGTTTATATTTTTGCCATCACACACAGCTTGGAGCAACCATGGACCACTCCGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS CAA 72 bp CCTAGCAACTTCCCGAGATCTCGGAGTGGTCCATGGTaGCTCCAAGCTGTGTGTGATGGCAAAAATATAAAC +
Preference number: 6 (lower is better)
Translates to: PSNFPRSRSGPW*LQAVCDGKNIN
Trigger: GTTTATATTTTTGCCATCACACACAGCTTGGAGCAACCATGGACCACTCCGAGATCTCGGGAAGTTGCTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS CAA 90 bp GCTTCTATTAGATCACCGAGGTCTTTAAGAACTGCATCTTTTACATaGCCTCGTCGTGCCTCCGGGCGGGCAAGACAGTGTAAAATCTTG +
Preference number: 6 (lower is better)
Translates to: ASIRSPRSLRTASFT*PRRASGRARQCKIL
Trigger: CAAGATTTTACACTGTCTTGCCCGCCCGGAGGCACGACGAGGCAATGTAAAAGATGCAGTTCTTAAAGACCTCGGTGATCTAATAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000523305.1
ENST00000613904.1
CDS GCA 72 bp TCATCCAGACTGGGAGCAGTGGAGTTCCGTTGTTCATaGATTACCCAAACTAAGGTGTGTTGTGATAGTAGC +
Preference number: 6 (lower is better)
Translates to: SSRLGAVEFRCS*ITQTKVCCDSS
Trigger: GCTACTATCACAACACACCTTAGTTTGGGTAATGCATGAACAACGGAACTCCACTGCTCCCAGTCTGGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519356.1
CDS CCA 72 bp GAAATGGCATGGTATAGGACCTGGGCTCTGTTATACTaGAGCAAATCAGCAGCTGGCACATTAAGCACAATG +
Preference number: 6 (lower is better)
Translates to: EMAWYRTWALLY*SKSAAGTLSTM
Trigger: CATTGTGCTTAATGTGCCAGCTGCTGATTTGCTCCAGTATAACAGAGCCCAGGTCCTATACCATGCCATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000519356.1
ENST00000613904.1
CDS GCA 72 bp GCTCTTAACAGACTCAGGTGTAAGGTTTGGATCCCTTaGTACATCACAAATCAGTTTCAAGAGGGCCTTCAG +
Preference number: 6 (lower is better)
Translates to: ALNRLRCKVWIP*YITNQFQEGLQ
Trigger: CTGAAGGCCCTCTTGAAACTGATTTGTGATGTAGCAAGGGATCCAAACCTTACACCTGAGTCTGTTAAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000519356.1
ENST00000520636.5
ENST00000613904.1
CDS CAA 72 bp GGGTTATTCTTCCAGGATTCCTTATACAAGTCGGGTTaGAGAAGCCCTAGTATCACCGAAAGTCTCCCTTTC +
Preference number: 6 (lower is better)
Translates to: GLFFQDSLYKSG*RSPSITESLPF
Trigger: GAAAGGGAGACTTTCGGTGATACTAGGGCTTCTCAAACCCGACTTGTATAAGGAATCCTGGAAGAATAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS TCA 72 bp GGTTATTCTTCCAGGATTCCTTATACAAGTCGGGTTTaGGAAGCCCTAGTATCACCGAAAGTCTCCCTTTCT +
Preference number: 6 (lower is better)
Translates to: GYSSRIPYTSRV*EALVSPKVSLS
Trigger: AGAAAGGGAGACTTTCGGTGATACTAGGGCTTCTCAAACCCGACTTGTATAAGGAATCCTGGAAGAATAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS TCA 72 bp CCAGGATTTTGTTCTCAGTCTGATAGTCATCTGAAATaGCCAATGATGCGGGAAGTACCCTTTCCAGATGCT +
Preference number: 6 (lower is better)
Translates to: PGFCSQSDSHLK*PMMREVPFPDA
Trigger: AGCATCTGGAAAGGGTACTTCCCGCATCATTGGTCATTTCAGATGACTATCAGACTGAGAACAAAATCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS TCA 72 bp TGTAGGGTGCGCCTTCAGAAACCTGCTGCACTTTTCTaGTATAGTTCACCACTTTTCTGTCTTCACAGCTTT +
Preference number: 6 (lower is better)
Translates to: CRVRLQKPAALF*YSSPLFCLHSF
Trigger: AAAGCTGTGAAGACAGAAAAGTGGTGAACTATATCAGAAAAGTGCAGCAGGTTTCTGAAGGCGCACCCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360742.9
ENST00000431156.7
ENST00000520636.5
ENST00000613904.1
CDS TCA 72 bp TGCGGAGCTCTGGTGCCAAGAAACTCAACTTTTCTATaGAAACAGGTTGATAATAATGGTGTCCACATCTTT +
Preference number: 6 (lower is better)
Translates to: CGALVPRNSTFL*KQVDNNGVHIF
Trigger: AAAGATGTGGACACCATTATTATCAACCTGTTTTCATAGAAAAGTTGAGTTTCTTGGCACCAGAGCTCCGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519356.1
CDS CAA 72 bp AAGAAAAGATTGTACTGGTTGCTATGGTGTGAATGTTaGTACCCTGCCCCAAATTCATATGTGAATTTCGTG +
Preference number: 6 (lower is better)
Translates to: KKRLYWLLWCEC*YPAPNSYVNFV
Trigger: CACGAAATTCACATATGAATTTGGGGCAGGGTACAAACATTCACACCATAGCAACCAGTACAATCTTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519356.1
CDS CAA 72 bp GGTCAAAGTCATTTATTCAAGAAAAGATTGTACTGGTaGCTATGGTGTGAATGTTTGTACCCTGCCCCAAAT +
Preference number: 6 (lower is better)
Translates to: GQSHLFKKRLYW*LWCECLYPAPN
Trigger: ATTTGGGGCAGGGTACAAACATTCACACCATAGCAACCAGTACAATCTTTTCTTGAATAAATGACTTTGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519356.1
CDS GCA 72 bp GTCAAAGTCATTTATTCAAGAAAAGATTGTACTGGTTaGTATGGTGTGAATGTTTGTACCCTGCCCCAAATT +
Preference number: 6 (lower is better)
Translates to: VKVIYSRKDCTG*YGVNVCTLPQI
Trigger: AATTTGGGGCAGGGTACAAACATTCACACCATAGCAACCAGTACAATCTTTTCTTGAATAAATGACTTTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519356.1
CDS TCA 72 bp TTTATTCAAGAAAAGATTGTACTGGTTGCTATGGTGTaGATGTTTGTACCCTGCCCCAAATTCATATGTGAA +
Preference number: 6 (lower is better)
Translates to: FIQEKIVLVAMV*MFVPCPKFICE
Trigger: TTCACATATGAATTTGGGGCAGGGTACAAACATTCACACCATAGCAACCAGTACAATCTTTTCTTGAATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519356.1