RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTI1 (Homo sapiens)

Ensembl gene IDs: ENSG00000101407

Ensembl transcript IDs: ENST00000373447.8, ENST00000373448.6, ENST00000449821.1, ENST00000473288.1, ENST00000487362.1, ENST00000620381.1

Found 480 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAACGCTGCCACCGCCTATaGCCGGGGTGGGGTCAGCCC +
Preference number: 2 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKRCHRL*PGWGQP
Trigger: GGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCG...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
3UTR-3UTR GCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAACTTCTCTGCTGCCGCTaGCACCGCCTATGGCCGGGG +
Preference number: 2 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKLLCCR*HRLWPG
Trigger: CCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
3UTR-3UTR GCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAAATTCACCTTCTCTGCTaGCGCTGCCACCGCCTATGG +
Preference number: 2 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKIHLLC*RCHRLW
Trigger: CCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGAAT...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
3UTR-3UTR GCA 90 bp TTATTAAGCCAGAAGCAACCTAAATGTCCTACAGGGGATGGACACTTAGTAACAAAAAGGGTACACAGCTaGAACCACGGAAAAACAGTT +
Preference number: 2 (lower is better)
Translates to: LLSQKQPKCPTGDGHLVTKRVHS*NHGKTV
Trigger: AACTGTTTTTCCGTGGTTGCAGCTGTGTACCCTTTT...TGTTACTAAGTGTCCATCCCCTGTAGGACATTTAGGTTGCTTCTGGCTTAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000620381.1
3UTR TCA 72 bp GGAACTGACCTCTTGTGTGTGTGTGTGTGTGGCCTGTaGGGGAGCTGGGGCTATAGAGATGGTAGGCTAAGG +
Preference number: 3 (lower is better)
Translates to: GTDLLCVCVCGL*GSWGYRDGRLR
Trigger: CCTTAGCCTACCATCTCTATAGCCCCAGCTCCCTCACAGGCCACACACACACACACACAAGAGGTCAGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
3UTR TCA 72 bp AAACAGGAGAATAGCTATGTTAGCCTGGTAAGGTTATaGGTAACTTTTCTTATTTCTACCCTTTCTGTAATG +
Preference number: 3 (lower is better)
Translates to: KQENSYVSLVRL*VTFLISTLSVM
Trigger: CATTACAGAAAGGGTAGAAATAAGAAAAGTTACTCATAACCTTACCAGGCTAACATAGCTATTCTCCTGTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620381.1
CDS-3UTR GCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGCTTCTCTGCTGCCGCTaGCACCGCCTATGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWLLCCR*HRLWPG
Trigger: CCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGGGTTCTGCTGCCCGCTaGCCCCGTGCAGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWGSAAR*PRAAAQ
Trigger: CTGTGCAGCTGCACGGGGCCAGCGGGCAGCAGAACC...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCCGCTGCCACCGCCTATaGCCGGGGTGGGGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFRCHRL*PGWGQP
Trigger: GGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCG...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGCGCTGCCACCGCCTATaGCCGGGGTGGGGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLRCHRL*PGWGQP
Trigger: GGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCG...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCCTTCTCTGCTGCCGCTaGCACCGCCTATGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSLLCCR*HRLWPG
Trigger: CCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCGGTTCTGCTGCCCGCTaGCCCCGTGCAGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSGSAAR*PRAAAQ
Trigger: CTGTGCAGCTGCACGGGGCCAGCGGGCAGCAGAACC...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGCGGTGGCCTCTGTGGTaGGGGAGCAGGGTCACTGCA +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWRWPLW*GSRVTA
Trigger: TGCAGTGACCCTGCTCCCCCACCACAGAGGCCACCG...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTCCCGTGTGAGTCGGTaGACGAGCGAGGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFSRVSR*TSEGQA
Trigger: GGCCTGGCCCTCGCTCGTTCACCGACTCACACGGGA...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGTCCCGTGTGAGTCGGTaGACGAGCGAGGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLSRVSR*TSEGQA
Trigger: GGCCTGGCCCTCGCTCGTTCACCGACTCACACGGGA...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTTGCCCGCTGGCCCCGTaGAGCTGCACAGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASCPLAP*SCTGWR
Trigger: CCTCCACCCTGTGCAGCTGCACGGGGCCAGCGGGCA...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTCTTCTCTGCTGCCGCTaGCACCGCCTATGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPALLCCR*HRLWPG
Trigger: CCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTGGTTCTGCTGCCCGCTaGCCCCGTGCAGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPAGSAAR*PRAAAQ
Trigger: CTGTGCAGCTGCACGGGGCCAGCGGGCAGCAGAACC...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGGATCGGTGGCCTCTGTaGTGGGGGAGCAGGGTCACT +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWDRWPL*WGSRVT
Trigger: AGTGACCCTGCTCCCCCACCACAGAGGCCACCGATC...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTTCCCGTGTGAGTCGGTaGACGAGCGAGGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASSRVSR*TSEGQA
Trigger: GGCCTGGCCCTCGCTCGTTCACCGACTCACACGGGA...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGCAGCCAGCTGCAACTTaGAGGCCAGCGTGTGCGAGT +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWQPAAT*RPACAS
Trigger: ACTCGCACACGCTGGCCTTCAAGTTGCAGCTGGCTG...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCACTGATGGGGGCCTaGGTGACTAGGGAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLALMGA*VTREPA
Trigger: GGCTGGCTCCCTAGTCACCCAGGCCCCCATCAGTGC...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCGCACTGATGGGGGCCTaGGTGACTAGGGAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFALMGA*VTREPA
Trigger: GGCTGGCTCCCTAGTCACCCAGGCCCCCATCAGTGC...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTCGGTGGCCTCTGTGGTaGGGGAGCAGGGTCACTGCA +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPARWPLW*GSRVTA
Trigger: TGCAGTGACCCTGCTCCCCCACCACAGAGGCCACCG...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGTGTGTTCACCAGACGTaGTGGCTTGGAGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWCVHQT*WLGGLG
Trigger: ACCCAGGCCTCCAAGCCATCACGTCTGGTGAACACA...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCCAGCCAGCTGCAACTTaGAGGCCAGCGTGTGCGAGT +
Preference number: 4 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSQPAAT*RPACAS
Trigger: ACTCGCACACGCTGGCCTTCAAGTTGCAGCTGGCTG...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTGGGGAGCAGGGTCACTaGAGCTCCTTGAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPAGEQGH*SSLSSW
Trigger: CCAGCTGCTCAAGGAGCTGCAGTGACCCTGCTCCCC...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGATTCACCTTCTCTGCTaGCGCTGCCACCGCCTATGG +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWIHLLC*RCHRLW
Trigger: CCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGAAT...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGGATGGCTTGGAGGCCTaGGTGCTCCATCATCAGCTC +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWDGLEA*VLHHQL
Trigger: GAGCTGATGATGGAGCACCCAGGCCTCCAAGCCATC...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCCTGAGTTCCGCAGCATaGCTTCCAGGACCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSLSSAA*LPGPLG
Trigger: CCCCAAAGGTCCTGGAAGTCATGCTGCGGAACTCAG...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGGGAGCAGGGTCACTaGAGCTCCTTGAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASGEQGH*SSLSSW
Trigger: CCAGCTGCTCAAGGAGCTGCAGTGACCCTGCTCCCC...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTCCAGACGTGATGGCTTaGAGGCCTGGGTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPAPDVMA*RPGCSI
Trigger: GATGGAGCACCCAGGCCTCCAAGCCATCACGTCTGG...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGATCGGTGGCCTCTGTaGTGGGGGAGCAGGGTCACT +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASDRWPL*WGSRVT
Trigger: AGTGACCCTGCTCCCCCACCACAGAGGCCACCGATC...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGCTGTCTGGGTCTTTGTaGGCTGAACACAGACTGGAC +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWLSGSL*AEHRLD
Trigger: GTCCAGTCTGTGTTCAGCTCACAAAGACCCAGACAG...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGTGTTCACCAGACGTaGTGGCTTGGAGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFCVHQT*WLGGLG
Trigger: ACCCAGGCCTCCAAGCCATCACGTCTGGTGAACACA...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCCTGAGTTCCGCAGCATaGCTTCCAGGACCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFLSSAA*LPGPLG
Trigger: CCCCAAAGGTCCTGGAAGTCATGCTGCGGAACTCAG...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGTGTGTGTGGCCTGTaGGGGAGCTGGGGCTATAGA +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFCVCGL*GSWGYR
Trigger: TCTATAGCCCCAGCTCCCTCACAGGCCACACACACA...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGTGTGTGTGTGGCCTGTaGGGGAGCTGGGGCTATAGA +
Preference number: 4 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQCVCGL*GSWGYR
Trigger: TCTATAGCCCCAGCTCCCTCACAGGCCACACACACA...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGCTAGGTGTGGTGGTGTaGACTAATAGTCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWLGVVV*TNSPSC
Trigger: GCAGCTGGGACTATTAGTGCACACCACCACACCTAG...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373448.6
CDS-3UTR GCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGTGTAAGACAGCCAGCTaGAACTTGAAGGCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWCKTAS*NLKASV
Trigger: CACGCTGGCCTTCAAGTTGCAGCTGGCTGTCTTACA...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCCTAATTCACCTTCTCTaGTGCCGCTGCCACCGCCTA +
Preference number: 4 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSLIHLL*CRCHRL
Trigger: TAGGCGGTGGCAGCGGCAGCAGAGAAGGTGAATTAG...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGTCAAACGCTCTCTTTTaGGACCTGGGGTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWSNALF*DLGSSG
Trigger: CCCTGAAGACCCCAGGTCCCAAAAGAGAGCGTTTGA...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCGCTTTGGAAAGCCGCTaGAGATGGGCCACAGAGTTG +
Preference number: 4 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSALESR*RWATEL
Trigger: CAACTCTGTGGCCCATCTCCAGCGGCTTTCCAAAGC...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTCCAGACGTGATGGCTTaGAGGCCTGGGTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASPDVMA*RPGCSI
Trigger: GATGGAGCACCCAGGCCTCCAAGCCATCACGTCTGG...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGGACTTCCAGGACCTTTaGGGTATGAGGATGCAGAGC +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWDFQDL*GMRMQS
Trigger: GCTCTGCATCCTCATACCCCAAAGGTCCTGGAAGTC...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCGATCTGCAATGGCAGTaGTGGCTCCACATCTGGACG +
Preference number: 4 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSDLQWQ*WLHIWT
Trigger: CGTCCAGATGTGGAGCCACCACTGCCATTGCAGATC...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCCGTGTGCGAGTAAACTaGTCCAGCCCTGGCACTGAT +
Preference number: 4 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSRVRVN*SSPGTD
Trigger: ATCAGTGCCAGGGCTGGACCAGTTTACTCGCACACG...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGTCCACCTTCATCAAGTaGAGGAAGACGCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWSTFIK*RKTLLA
Trigger: TGCCAGGAGCGTCTTCCTCCACTTGATGAAGGTGGA...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTCAGGAGGAACCAGGTaGAGTCTGGGTCCACCTTCA +
Preference number: 4 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSSGGTR*SLGPPS
Trigger: TGAAGGTGGACCCAGACTCCACCTGGTTCCTCCTGA...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCAGCTGGAGCACGTTaGTCGTGTAGGGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLAAGAR*SCRGSA
Trigger: AGCAGAACCCCTACACGACCAACGTGCTCCAGCTGC...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGGCAGCTGGAGCACGTTaGTCGTGTAGGGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQAAGAR*SCRGSA
Trigger: AGCAGAACCCCTACACGACCAACGTGCTCCAGCTGC...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGCAGCCTTCCCCTCATTaGGGAAACATCCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLQPSPH*GNILQA
Trigger: AGCCTGCAGGATGTTTCCTCAATGAGGGGAAGGCTG...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGAAGCAGGTTAGCATCTaGGTTCCGCAGCATGACTTC +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWKQVSI*VPQHDF
Trigger: GAAGTCATGCTGCGGAACTCAGATGCTAACCTGCTT...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTTGTGTGTGTGGCCTGTaGGGGAGCTGGGGCTATAGA +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASCVCGL*GSWGYR
Trigger: TCTATAGCCCCAGCTCCCTCACAGGCCACACACACA...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGAGTCGTGTCTGCAGATaGTCCACATTCTCCACTGTC +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWSRVCR*STFSTV
Trigger: GACAGTGGAGAATGTGGAGCATCTGCAGACACGACT...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTGTAAGACAGCCAGCTaGAACTTGAAGGCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSCKTAS*NLKASV
Trigger: CACGCTGGCCTTCAAGTTGCAGCTGGCTGTCTTACA...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTATTCACCTTCTCTGCTaGCGCTGCCACCGCCTATGG +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASIHLLC*RCHRLW
Trigger: CCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGAAT...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTCTAATTCACCTTCTCTaGTGCCGCTGCCACCGCCTA +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPALIHLL*CRCHRL
Trigger: TAGGCGGTGGCAGCGGCAGCAGAGAAGGTGAATTAG...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTAATTCACCTTCTCTaGTGCCGCTGCCACCGCCTA +
Preference number: 4 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQLIHLL*CRCHRL
Trigger: TAGGCGGTGGCAGCGGCAGCAGAGAAGGTGAATTAG...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGGAAAGCCGCTGGAGATaGGCCACAGAGTTGAGGACA +
Preference number: 4 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQESRWR*ATELRT
Trigger: TGTCCTCAACTCTGTGGCCCATCTCCAGCGGCTTTC...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCGACTTCCAGGACCTTTaGGGTATGAGGATGCAGAGC +
Preference number: 4 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSDFQDL*GMRMQS
Trigger: GCTCTGCATCCTCATACCCCAAAGGTCCTGGAAGTC...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGATCTGCAATGGCAGTaGTGGCTCCACATCTGGACG +
Preference number: 4 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLDLQWQ*WLHIWT
Trigger: CGTCCAGATGTGGAGCCACCACTGCCATTGCAGATC...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCGTGTGCGAGTAAACTaGTCCAGCCCTGGCACTGAT +
Preference number: 4 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQRVRVN*SSPGTD
Trigger: ATCAGTGCCAGGGCTGGACCAGTTTACTCGCACACG...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTCCACCTTCATCAAGTaGAGGAAGACGCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSSTFIK*RKTLLA
Trigger: TGCCAGGAGCGTCTTCCTCCACTTGATGAAGGTGGA...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTCAGCCTTCCCCTCATTaGGGAAACATCCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASQPSPH*GNILQA
Trigger: AGCCTGCAGGATGTTTCCTCAATGAGGGGAAGGCTG...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGTTTTTGGGAGCTGGGTaGATACAGACAAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWFLGAG*IQTSRE
Trigger: CTCTCTGCTTGTCTGTATTCACCCAGCTCCCAAAAA...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGGTGCTGGTAGCCACCTaGCTAATGAGTAGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQVLVAT*LMSRVW
Trigger: CCAAACCCTACTCATTAGTCAGGTGGCTACCAGCAC...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTGTGCTGGTAGCCACCTaGCTAATGAGTAGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPAVLVAT*LMSRVW
Trigger: CCAAACCCTACTCATTAGTCAGGTGGCTACCAGCAC...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCGTGCTGGTAGCCACCTaGCTAATGAGTAGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFVLVAT*LMSRVW
Trigger: CCAAACCCTACTCATTAGTCAGGTGGCTACCAGCAC...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGGAGCATGCAGAACGCTaGCAAAGGAAGCAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQEHAER*QRKQLS
Trigger: AGAGAGCTGCTTCCTTTGTCAGCGTTCTGCATGCTC...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCCAGATGGAGGGGAACTaGCCTCTTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFQMEGN*PLVCVC
Trigger: ACACACACACACAAGAGGTCAGTTCCCCTCCATCTG...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCAGATGGAGGGGAACTaGCCTCTTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQQMEGN*PLVCVC
Trigger: ACACACACACACAAGAGGTCAGTTCCCCTCCATCTG...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGCAAAAACTGCCATTGTaGAGCAGCCTTCCCCTCATT +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWQKLPL*SSLPLI
Trigger: AATGAGGGGAAGGCTGCTGCACAATGGCAGTTTTTG...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCAGTCGTGTCTGCAGATaGTCCACATTCTCCACTGTC +
Preference number: 4 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSSRVCR*STFSTV
Trigger: GACAGTGGAGAATGTGGAGCATCTGCAGACACGACT...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTCTTCAGCTGTGGTGGTaGTCTTCTCAAGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPALQLWW*SSQELL
Trigger: CAGCAGCTCTTGAGAAGAGCACCACCACAGCTGAAG...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCCTTTGCAGAACCGGCTaGGAAGAAAGTCACCACACT +
Preference number: 4 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSLCRTG*EESHHT
Trigger: AGTGTGGTGACTTTCTTCGCAGCCGGTTCTGCAAAG...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGAGACAGGGAGGTGTATaGAGATGGAGGGGAACTGAC +
Preference number: 4 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLRQGGV*RWRGTD
Trigger: GTCAGTTCCCCTCCATCTGCATACACCTCCCTGTCT...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTAGACAGGGAGGTGTATaGAGATGGAGGGGAACTGAC +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPARQGGV*RWRGTD
Trigger: GTCAGTTCCCCTCCATCTGCATACACCTCCCTGTCT...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCAAACGCTCTCTTTTaGGACCTGGGGTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPASNALF*DLGSSG
Trigger: CCCTGAAGACCCCAGGTCCCAAAAGAGAGCGTTTGA...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGTCAAACGCTCTCTTTTaGGACCTGGGGTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQSNALF*DLGSSG
Trigger: CCCTGAAGACCCCAGGTCCCAAAAGAGAGCGTTTGA...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGCAGGTTTTTGGGAGCTaGGTGAATACAGACAAGCAG +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWQVFGS*VNTDKQ
Trigger: CTGCTTGTCTGTATTCACCCAGCTCCCAAAAACCTG...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGAAAGCCGCTGGAGATaGGCCACAGAGTTGAGGACA +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASESRWR*ATELRT
Trigger: TGTCCTCAACTCTGTGGCCCATCTCCAGCGGCTTTC...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGCATTCTCATCCACTTTaGGAGGGACTGACTGTTCCT +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWHSHPL*EGLTVP
Trigger: AGGAACAGTCAGTCCCTCCCAAAGTGGATGAGAATG...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGTGGTGGCTCCACATCTaGACGGGTGTCATTCTCATC +
Preference number: 4 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQWWLHI*TGVILI
Trigger: GATGAGAATGACACCCGTCCAGATGTGGAGCCACCA...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTGGTGGCTCCACATCTaGACGGGTGTCATTCTCATC +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPAWWLHI*TGVILI
Trigger: GATGAGAATGACACCCGTCCAGATGTGGAGCCACCA...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGTATTTGGATCTGCAATaGCAGTGGTGGCTCCACATC +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWYLDLQ*QWWLHI
Trigger: GATGTGGAGCCACCACTGCCATTGCAGATCCAAATA...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCGGAGGAAGACGCTCCTaGCAGCCTCTTGTAATTTCA +
Preference number: 4 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSGGRRS*QPLVIS
Trigger: TGAAATTACAAGAGGCTGCCAGGAGCGTCTTCCTCC...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTTCAGGAGGAACCAGGTaGAGTCTGGGTCCACCTTCA +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASSGGTR*SLGPPS
Trigger: TGAAGGTGGACCCAGACTCCACCTGGTTCCTCCTGA...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGGAGGTGTATGCAGATaGAGGGGAACTGACCTCTTG +
Preference number: 4 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLGGVCR*RGTDLL
Trigger: CAAGAGGTCAGTTCCCCTCCATCTGCATACACCTCC...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGGTCTTTGTGAGCTaGACACAGACTGGACGTAAG +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFWVFVS*TQTGRK
Trigger: CTTACGTCCAGTCTGTGTTCAGCTCACAAAGACCCA...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGTTCAAGTTCATCCAATaGCCTTGGATGGTCCTGACA +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWFKFIQ*PWMVLT
Trigger: TGTCAGGACCATCCAAGGTCATTGGATGAACTTGAA...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTCTAGAACTTGGATaGGTGCTTTGGAAAGCCGCT +
Preference number: 4 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLALELG*VLWKAA
Trigger: AGCGGCTTTCCAAAGCACTCATCCAAGTTCTAGAGC...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCGTTCCTCAACAATCTTaGTGTCAGCCACGTCTAGCT +
Preference number: 4 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSVPQQS*CQPRLA
Trigger: AGCTAGACGTGGCTGACATCAAGATTGTTGAGGAAC...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCGGATGCAGAGCCAGATaGCGCAGATTTAAAGAGATC +
Preference number: 4 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSGCRAR*RRFKEI
Trigger: GATCTCTTTAAATCTGCGTCATCTGGCTCTGCATCC...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCAAGCAGGTTAGCATCTaGGTTCCGCAGCATGACTTC +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFKQVSI*VPQHDF
Trigger: GAAGTCATGCTGCGGAACTCAGATGCTAACCTGCTT...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGAGCATGCAGAACGCTaGCAAAGGAAGCAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASEHAER*QRKQLS
Trigger: AGAGAGCTGCTTCCTTTGTCAGCGTTCTGCATGCTC...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCCACTTTGGGAGGGACTaGCTGTTCCTCTTCTTCATT +
Preference number: 4 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSHFGRD*LFLFFI
Trigger: AATGAAGAAGAGGAACAGTCAGTCCCTCCCAAAGTG...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTCAGATGGAGGGGAACTaGCCTCTTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASQMEGN*PLVCVC
Trigger: ACACACACACACAAGAGGTCAGTTCCCCTCCATCTG...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGAGTCGTGTCTGCAGATaGTCCACATTCTCCACTGTC +
Preference number: 4 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLSRVCR*STFSTV
Trigger: GACAGTGGAGAATGTGGAGCATCTGCAGACACGACT...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCGCTGCCATCAGAGCATaGAGAACGCTGACAAAGGAA +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFAAIRA*RTLTKE
Trigger: TTCCTTTGTCAGCGTTCTGCATGCTCTGATGGCAGC...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGTCTTCTCCTAAACTTTaGTCTTGGAGGTGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWSSPKL*SWRCPR
Trigger: TCTTGGGCACCTCCAAGAGCAAAGTTTAGGAGAAGA...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTCTTCAGCTGTGGTGGTaGTCTTCTCAAGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASLQLWW*SSQELL
Trigger: CAGCAGCTCTTGAGAAGAGCACCACCACAGCTGAAG...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGATGGCTATTTGGATCTaGAATGGCAGTGGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQMAIWI*NGSGGS
Trigger: GGAGCCACCACTGCCATTGCAGATCCAAATAGCCAT...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGCTGACAACAAGTGGATaGAGCGTTCCATCACGTCCA +
Preference number: 4 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLLTTSG*SVPSRP
Trigger: TGGACGTGATGGAACGCTGCATCCACTTGTTGTCAG...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCCTGACAACAAGTGGATaGAGCGTTCCATCACGTCCA +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFLTTSG*SVPSRP
Trigger: TGGACGTGATGGAACGCTGCATCCACTTGTTGTCAG...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTGACAACAAGTGGATaGAGCGTTCCATCACGTCCA +
Preference number: 4 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQLTTSG*SVPSRP
Trigger: TGGACGTGATGGAACGCTGCATCCACTTGTTGTCAG...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGCTTTGCAGAACCGGCTaGGAAGAAAGTCACCACACT +
Preference number: 4 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLLCRTG*EESHHT
Trigger: AGTGTGGTGACTTTCTTCGCAGCCGGTTCTGCAAAG...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTTGGCAGGACATCTTTaGAGAACCGGCTGCGAAGAA +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFLAGHL*RTGCEE
Trigger: TTCTTCGCAGCCGGTTCTGCAAAGATGTCCTGCCAA...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGTTGGCAGGACATCTTTaGAGAACCGGCTGCGAAGAA +
Preference number: 4 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLLAGHL*RTGCEE
Trigger: TTCTTCGCAGCCGGTTCTGCAAAGATGTCCTGCCAA...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGATTGAGGAAACATCCTaGAGGCTCGTCTTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLIEETS*RLVFQP
Trigger: AGGCTGGAAGACGAGCCTGCAGGATGTTTCCTCAAT...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373447.8
CDS-3UTR CCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTCTCTCTTTTGGGACCTaGGGTCTTCAGGGTAAATCG +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPALSFGT*GLQGKS
Trigger: CGATTTACCCTGAAGACCCCAGGTCCCAAAAGAGAG...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTACAGCCGCAGGTTTTTaGGAGCTGGGTGAATACAGA +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPATAAGF*ELGEYR
Trigger: TCTGTATTCACCCAGCTCCCAAAAACCTGCGGCTGT...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTTGCCCTGGTCATCTTaGGAGTTCATTAGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFLPWSS*EFIRRG
Trigger: TCCTCGCCTAATGAACTCCCAAGATGACCAGGGCAA...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTTGCCCTGGTCATCTTaGGAGTTCATTAGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPALPWSS*EFIRRG
Trigger: TCCTCGCCTAATGAACTCCCAAGATGACCAGGGCAA...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGTTCCAAGGCTGTGTaGCTGAGGTCTTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASGSKAV*LRSLEK
Trigger: CTTCTCCAAAGACCTCAGCCACACAGCCTTGGAACC...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCGGAAATATCTCCTCTaGATGCGGTTCCAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQRKYLL*MRFQGC
Trigger: ACAGCCTTGGAACCGCATCCAGAGGAGATATTTCCG...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCCGGAAATATCTCCTCTaGATGCGGTTCCAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFRKYLL*MRFQGC
Trigger: ACAGCCTTGGAACCGCATCCAGAGGAGATATTTCCG...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGCGGAAATATCTCCTCTaGATGCGGTTCCAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLRKYLL*MRFQGC
Trigger: ACAGCCTTGGAACCGCATCCAGAGGAGATATTTCCG...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGCCTAAACTTTGCTCTTaGAGGTGCCCAAGATTACCT +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWPKLCS*RCPRLP
Trigger: AGGTAATCTTGGGCACCTCCAAGAGCAAAGTTTAGG...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTGTCTTCAGCTGTGGTaGTGCTCTTCTCAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPACLQLW*CSSQEL
Trigger: CAGCTCTTGAGAAGAGCACCACCACAGCTGAAGACA...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCCGATGTCTTCAGCTGTaGTGGTGCTCTTCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFRCLQL*WCSSQE
Trigger: CTCTTGAGAAGAGCACCACCACAGCTGAAGACATCG...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGGTTCCATCACGTCCATaGCTATTTGGATCTGCAATG +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWVPSRP*LFGSAM
Trigger: CATTGCAGATCCAAATAGCCATGGACGTGATGGAAC...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCGGAGGAAGACGCTCCTaGCAGCCTCTTGTAATTTCA +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFGGRRS*QPLVIS
Trigger: TGAAATTACAAGAGGCTGCCAGGAGCGTCTTCCTCC...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGAGGTGTATGCAGATaGAGGGGAACTGACCTCTTG +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASGGVCR*RGTDLL
Trigger: CAAGAGGTCAGTTCCCCTCCATCTGCATACACCTCC...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTTTTTGGGAGCTGGGTaGATACAGACAAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFFLGAG*IQTSRE
Trigger: CTCTCTGCTTGTCTGTATTCACCCAGCTCCCAAAAA...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGTTTTTGGGAGCTGGGTaGATACAGACAAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLFLGAG*IQTSRE
Trigger: CTCTCTGCTTGTCTGTATTCACCCAGCTCCCAAAAA...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGACCTTGGATGGTCCTaGCAATCACACTGCAAGAGT +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASDLGWS*QSHCKS
Trigger: ACTCTTGCAGTGTGATTGTCAGGACCATCCAAGGTC...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGCATTCGACCAATGATTaGCTGCACTTCAAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWHSTND*LHFKRR
Trigger: CCTTCTTTTGAAGTGCAGTCAATCATTGGTCGAATG...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGCTCTAGAACTTGGATaGGTGCTTTGGAAAGCCGCT +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASALELG*VLWKAA
Trigger: AGCGGCTTTCCAAAGCACTCATCCAAGTTCTAGAGC...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGCCACATCCTTCTCTTTaGGGTAGTTCAGCAAAAACT +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWPHPSL*GSSAKT
Trigger: AGTTTTTGCTGAACTACCTCAAAGAGAAGGATGTGG...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCCACTTTGGGAGGGACTaGCTGTTCCTCTTCTTCATT +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFHFGRD*LFLFFI
Trigger: AATGAAGAAGAGGAACAGTCAGTCCCTCCCAAAGTG...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGTTGCAGATTTTTATCTaGCAACAAGTGGATGCAGCG +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWLQIFI*QQVDAA
Trigger: CGCTGCATCCACTTGTTGTCAGATAAAAATCTGCAA...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGTTCCATCTCATTATTTaGAGACAGGGAGGTGTATGC +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWFHLII*RQGGVC
Trigger: GCATACACCTCCCTGTCTTCAAATAATGAGATGGAA...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTCAAAAACTGCCATTGTaGAGCAGCCTTCCCCTCATT +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPAQKLPL*SSLPLI
Trigger: AATGAGGGGAAGGCTGCTGCACAATGGCAGTTTTTG...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCAGGAGTATCAAAAACTaGCATTGTGCAGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSRSIKN*HCAAAF
Trigger: GAAGGCTGCTGCACAATGGCAGTTTTTGATACTCCT...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGCTTGTAGTCGTGTCTaGAGATGCTCCACATTCTCC +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASACSRV*RCSTFS
Trigger: GGAGAATGTGGAGCATCTGCAGACACGACTACAAGC...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGAACAAATCCCCCAGCTaGTTTTGTTCAAGTTCATCC +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWNKSPS*FCSSSS
Trigger: GGATGAACTTGAACAAAAGCAGCTGGGGGATTTGTT...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTACTCTGTGCTCAACTaGAGGTTTTGCTTGGACCTT +
Preference number: 4 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSYSVLN*RFCLDL
Trigger: AAGGTCCAAGCAAAACCTGCAGTTGAGCACAGAGTA...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGAGCTCTGCTACTCTGTaGTCAACTGCAGGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLSSATL*STAGFA
Trigger: AGCAAAACCTGCAGTTGAGCACAGAGTAGCAGAGCT...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGGTAAACCATCAGCTCTaGTACTCTGTGCTCAACTGC +
Preference number: 4 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQVNHQL*YSVLNC
Trigger: GCAGTTGAGCACAGAGTAGCAGAGCTGATGGTTTAC...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCCAGCGAGGGCTTTGTTaGCCACCACTACTTTTTGAT +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFQRGLC*PPLLFD
Trigger: ATCAAAAAGTAGTGGTGGGCAACAAAGCCCTCGCTG...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGCTTTGCTCTTGGAGGTaGCCAAGATTACCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLLCSWR*PRLPVS
Trigger: AGACACAGGTAATCTTGGGCACCTCCAAGAGCAAAG...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTCTTCTCCTAAACTTTaGTCTTGGAGGTGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSSSPKL*SWRCPR
Trigger: TCTTGGGCACCTCCAAGAGCAAAGTTTAGGAGAAGA...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCGAAAGTCACCACACTTaGTTCCCAGGGTACGTAAAA +
Preference number: 4 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSESHHT*FPGYVK
Trigger: TTTTACGTACCCTGGGAAGCAAGTGTGGTGACTTTC...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGCATTCCACCACACTTTaGATCAAACGCTCTCTTTTG +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWHSTTL*IKRSLL
Trigger: CAAAAGAGAGCGTTTGATCCAAAGTGTGGTGGAATG...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTCAGGTTTTTGGGAGCTaGGTGAATACAGACAAGCAG +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPAQVFGS*VNTDKQ
Trigger: CTGCTTGTCTGTATTCACCCAGCTCCCAAAAACCTG...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGTCTAGCTCTAGAACTTaGATGAGTGCTTTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWSSSRT*MSALES
Trigger: GCTTTCCAAAGCACTCATCCAAGTTCTAGAGCTAGA...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGCTAATGAGTAGGGTTTaGTCTCCAGCCTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLLMSRV*SPAFSS
Trigger: ACTGGAGAAGGCTGGAGACCAAACCCTACTCATTAG...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTTGTCTTCAGCTGTGGTaGTGCTCTTCTCAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASCLQLW*CSSQEL
Trigger: CAGCTCTTGAGAAGAGCACCACCACAGCTGAAGACA...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGACGTCCATGGCTATTTaGATCTGCAATGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLTSMAI*ICNGSG
Trigger: ACCACTGCCATTGCAGATCCAAATAGCCATGGACGT...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGAGGAAGACGCTCCTaGCAGCCTCTTGTAATTTCA +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASGGRRS*QPLVIS
Trigger: TGAAATTACAAGAGGCTGCCAGGAGCGTCTTCCTCC...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCAAACATCCTGCAGGCTaGAGGAAGGAAACTGTTCAG +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFKHPAG*RKETVQ
Trigger: CTGAACAGTTTCCTTCCTCCAGCCTGCAGGATGTTT...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449821.1
CDS-3UTR TCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTACAAGCAGAGAGTTCTaGAAAGAGTTCCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPATSREF*KEFLEK
Trigger: CTTCTCCAGGAACTCTTTTCAGAACTCTCTGCTTGT...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGACAAGCAGAGAGTTCTaGAAAGAGTTCCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQTSREF*KEFLEK
Trigger: CTTCTCCAGGAACTCTTTTCAGAACTCTCTGCTTGT...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGCATAAAAAGTCAGAATaGTGTCCCCATAAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWHKKSE*CPHKLS
Trigger: ACTCAGCTTATGGGGACATCATTCTGACTTTTTATG...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGTTCAAGTTCATCCAATaGCCTTGGATGGTCCTGACA +
Preference number: 4 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQFKFIQ*PWMVLT
Trigger: TGTCAGGACCATCCAAGGTCATTGGATGAACTTGAA...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCAGCACATTCGACCAATaGTTGACTGCACTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSSTFDQ*LTALQK
Trigger: CTTTTGAAGTGCAGTCAATCATTGGTCGAATGTGCT...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGTTCCTCAACAATCTTaGTGTCAGCCACGTCTAGCT +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASVPQQS*CQPRLA
Trigger: AGCTAGACGTGGCTGACATCAAGATTGTTGAGGAAC...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGTTAATATGTTTTTCGTaGAGATCCTCAACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWLICFS*RSSTSS
Trigger: GCTGGAGGTTGAGGATCTTCACGAAAAACATATTAA...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCAGTCTGAATTTTGATTaGTCAGGTGCTGCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFSLNFD*SGAAGS
Trigger: ACTCCCTGCAGCACCTGATCAATCAAAATTCAGACT...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGAGTCTGAATTTTGATTaGTCAGGTGCTGCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQSLNFD*SGAAGS
Trigger: ACTCCCTGCAGCACCTGATCAATCAAAATTCAGACT...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTAGTCTGAATTTTGATTaGTCAGGTGCTGCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPASLNFD*SGAAGS
Trigger: ACTCCCTGCAGCACCTGATCAATCAAAATTCAGACT...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTCACTTTGGGAGGGACTaGCTGTTCCTCTTCTTCATT +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASHFGRD*LFLFFI
Trigger: AATGAAGAAGAGGAACAGTCAGTCCCTCCCAAAGTG...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGTTTTTGTGGGACTaGAGAACAACCACACACAGA +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFWFLWD*RTTTHR
Trigger: TCTGTGTGTGGTTGTTCTTCAGTCCCACAAAAACCA...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCAACAAATCCCCCAGCTaGTTTTGTTCAAGTTCATCC +
Preference number: 4 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSNKSPS*FCSSSS
Trigger: GGATGAACTTGAACAAAAGCAGCTGGGGGATTTGTT...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGTACTCTGTGCTCAACTaGAGGTTTTGCTTGGACCTT +
Preference number: 4 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQYSVLN*RFCLDL
Trigger: AAGGTCCAAGCAAAACCTGCAGTTGAGCACAGAGTA...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGTACTCTGTGCTCAACTaGAGGTTTTGCTTGGACCTT +
Preference number: 4 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLYSVLN*RFCLDL
Trigger: AAGGTCCAAGCAAAACCTGCAGTTGAGCACAGAGTA...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTAGCTCTGCTACTCTGTaGTCAACTGCAGGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASSSATL*STAGFA
Trigger: AGCAAAACCTGCAGTTGAGCACAGAGTAGCAGAGCT...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTTCTCCTAAACTTTaGTCTTGGAGGTGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPASSPKL*SWRCPR
Trigger: TCTTGGGCACCTCCAAGAGCAAAGTTTAGGAGAAGA...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTGAAAGTCACCACACTTaGTTCCCAGGGTACGTAAAA +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPAESHHT*FPGYVK
Trigger: TTTTACGTACCCTGGGAAGCAAGTGTGGTGACTTTC...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTCTGAAAAGAGTTCCTaGAGAAGCTCCTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSSEKSS*RSSCSF
Trigger: GAAAGAACAGGAGCTTCTCCAGGAACTCTTTTCAGA...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTCAGGTTTTTGGGAGCTaGGTGAATACAGACAAGCAG +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASQVFGS*VNTDKQ
Trigger: CTGCTTGTCTGTATTCACCCAGCTCCCAAAAACCTG...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCCTAAACGTGGCAGAATaGAGGGCTCATAAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSLNVAE*RAHKKS
Trigger: TGACTTTTTATGAGCCCTCCATTCTGCCACGTTTAG...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTATTGCACTGGGCTTaGATTTCAGGACTCTCATCA +
Preference number: 4 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSLLHWA*ISGLSS
Trigger: TGATGAGAGTCCTGAAATCCAAGCCCAGTGCAATAA...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCAGAAAAGATGTAACTTaGCAGGTGTGTTCACCAGAC +
Preference number: 4 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSRKDVT*QVCSPD
Trigger: GTCTGGTGAACACACCTGCCAAGTTACATCTTTTCT...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTCTAATGAGTAGGGTTTaGTCTCCAGCCTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASLMSRV*SPAFSS
Trigger: ACTGGAGAAGGCTGGAGACCAAACCCTACTCATTAG...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGAAAATTGGTCCAGGGTaGCCAAGACATCTTGAACCA +
Preference number: 4 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQKIGPG*PRHLEP
Trigger: TGGTTCAAGATGTCTTGGCCACCCTGGACCAATTTT...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCAAAATTGGTCCAGGGTaGCCAAGACATCTTGAACCA +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFKIGPG*PRHLEP
Trigger: TGGTTCAAGATGTCTTGGCCACCCTGGACCAATTTT...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCCTAAACTTTGCTCTTaGAGGTGCCCAAGATTACCT +
Preference number: 4 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQPKLCS*RCPRLP
Trigger: AGGTAATCTTGGGCACCTCCAAGAGCAAAGTTTAGG...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTTATTTGGATCTGCAATaGCAGTGGTGGCTCCACATC +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASYLDLQ*QWWLHI
Trigger: GATGTGGAGCCACCACTGCCATTGCAGATCCAAATA...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTGTTCCATCACGTCCATaGCTATTTGGATCTGCAATG +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPAVPSRP*LFGSAM
Trigger: CATTGCAGATCCAAATAGCCATGGACGTGATGGAAC...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGTTATCTGACAACAAGTaGATGCAGCGTTCCATCACG +
Preference number: 4 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQLSDNK*MQRSIT
Trigger: CGTGATGGAACGCTGCATCCACTTGTTGTCAGATAA...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCAAGAAAGGACAAATGTaGGGCATTCCACCACACTTT +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFKKGQM*GIPPHF
Trigger: AAAGTGTGGTGGAATGCCTCACATTTGTCCTTTCTT...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTAAGAAAGGACAAATGTaGGGCATTCCACCACACTTT +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPAKKGQM*GIPPHF
Trigger: AAAGTGTGGTGGAATGCCTCACATTTGTCCTTTCTT...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTTTCAAGTTCATCCAATaGCCTTGGATGGTCCTGACA +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASFKFIQ*PWMVLT
Trigger: TGTCAGGACCATCCAAGGTCATTGGATGAACTTGAA...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGATACGACAATGCTGTaGCCTTGTTTAAAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLDTTML*PCLKSP
Trigger: AGGAGACTTTAAACAAGGTCACAGCATTGTCGTATC...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGCATTCGACCAATGATTaGCTGCACTTCAAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLHSTND*LHFKRR
Trigger: CCTTCTTTTGAAGTGCAGTCAATCATTGGTCGAATG...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTAGCACATTCGACCAATaGTTGACTGCACTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPASTFDQ*LTALQK
Trigger: CTTTTGAAGTGCAGTCAATCATTGGTCGAATGTGCT...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGAGCACATTCGACCAATaGTTGACTGCACTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLSTFDQ*LTALQK
Trigger: CTTTTGAAGTGCAGTCAATCATTGGTCGAATGTGCT...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTAGATTCTCTCATCAGTaGAGAAGCGGAAATATCTCC +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPARFSHQ*RSGNIS
Trigger: GGAGATATTTCCGCTTCTTCACTGATGAGAGAATCT...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGTACTGGATAAAGGGCTaGCATCAAGAGCAAACAGAA +
Preference number: 4 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLYWIKG*HQEQTE
Trigger: TTCTGTTTGCTCTTGATGTCAGCCCTTTATCCAGTA...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTACTGGATAAAGGGCTaGCATCAAGAGCAAACAGAA +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFYWIKG*HQEQTE
Trigger: TTCTGTTTGCTCTTGATGTCAGCCCTTTATCCAGTA...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGGGTCTTTGGTTCAAATaGCTTCCCTCTTCTCCTAAA +
Preference number: 4 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQGLWFK*LPSSPK
Trigger: TTTAGGAGAAGAGGGAAGTCATTTGAACCAAAGACC...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTGGTCTTTGGTTCAAATaGCTTCCCTCTTCTCCTAAA +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPAGLWFK*LPSSPK
Trigger: TTTAGGAGAAGAGGGAAGTCATTTGAACCAAAGACC...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTTGCAGATTTTTATCTaGCAACAAGTGGATGCAGCG +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFLQIFI*QQVDAA
Trigger: CGCTGCATCCACTTGTTGTCAGATAAAAATCTGCAA...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTTGGTTTTTGTGGGACTaGAGAACAACCACACACAGA +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASWFLWD*RTTTHR
Trigger: TCTGTGTGTGGTTGTTCTTCAGTCCCACAAAAACCA...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTTCCATCTCATTATTTaGAGACAGGGAGGTGTATGC +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFFHLII*RQGGVC
Trigger: GCATACACCTCCCTGTCTTCAAATAATGAGATGGAA...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGTTCCATCTCATTATTTaGAGACAGGGAGGTGTATGC +
Preference number: 4 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLFHLII*RQGGVC
Trigger: GCATACACCTCCCTGTCTTCAAATAATGAGATGGAA...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCGACCAATGATTGACTaGACTTCAAAAGAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQRPMID*TSKEGP
Trigger: AGGACCTTCTTTTGAAGTGCAGTCAATCATTGGTCG...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTCGACCAATGATTGACTaGACTTCAAAAGAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPARPMID*TSKEGP
Trigger: AGGACCTTCTTTTGAAGTGCAGTCAATCATTGGTCG...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGAAAGTCACCACACTTaGTTCCCAGGGTACGTAAAA +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASESHHT*FPGYVK
Trigger: TTTTACGTACCCTGGGAAGCAAGTGTGGTGACTTTC...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTCTGAAAAGAGTTCCTaGAGAAGCTCCTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFSEKSS*RSSCSF
Trigger: GAAAGAACAGGAGCTTCTCCAGGAACTCTTTTCAGA...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCAATGTGCTAAGTCCCTaGATCACAGCCAATTTCAAC +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFNVLSP*ITANFN
Trigger: GTTGAAATTGGCTGTGATCCAGGGACTTAGCACATT...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGAATGTGCTAAGTCCCTaGATCACAGCCAATTTCAAC +
Preference number: 4 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQNVLSP*ITANFN
Trigger: GTTGAAATTGGCTGTGATCCAGGGACTTAGCACATT...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTAAACGTGGCAGAATaGAGGGCTCATAAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQLNVAE*RAHKKS
Trigger: TGACTTTTTATGAGCCCTCCATTCTGCCACGTTTAG...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGTTATTGCACTGGGCTTaGATTTCAGGACTCTCATCA +
Preference number: 4 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQLLHWA*ISGLSS
Trigger: TGATGAGAGTCCTGAAATCCAAGCCCAGTGCAATAA...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGTAGAGAATTTGCCCTaGTCATCTTGGGAGTTCATT +
Preference number: 4 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLVENLP*SSWEFI
Trigger: AATGAACTCCCAAGATGACCAGGGCAAATTCTCTAC...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGGTAGAGAATTTGCCCTaGTCATCTTGGGAGTTCATT +
Preference number: 4 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQVENLP*SSWEFI
Trigger: AATGAACTCCCAAGATGACCAGGGCAAATTCTCTAC...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGTCTAGCTCTAGAACTTaGATGAGTGCTTTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQSSSRT*MSALES
Trigger: GCTTTCCAAAGCACTCATCCAAGTTCTAGAGCTAGA...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTAGAAAAGATGTAACTTaGCAGGTGTGTTCACCAGAC +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPARKDVT*QVCSPD
Trigger: GTCTGGTGAACACACCTGCCAAGTTACATCTTTTCT...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTCCTAAACTTTGCTCTTaGAGGTGCCCAAGATTACCT +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASPKLCS*RCPRLP
Trigger: AGGTAATCTTGGGCACCTCCAAGAGCAAAGTTTAGG...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTCAAGAGCTGCTaGTCTTTGGTTCAAATGACT +
Preference number: 4 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQLLKSC*SLVQMT
Trigger: AGTCATTTGAACCAAAGACCAGCAGCTCTTGAGAAG...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCCTTCTCAAGAGCTGCTaGTCTTTGGTTCAAATGACT +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFLLKSC*SLVQMT
Trigger: AGTCATTTGAACCAAAGACCAGCAGCTCTTGAGAAG...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGTTCCATCACGTCCATaGCTATTTGGATCTGCAATG +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASVPSRP*LFGSAM
Trigger: CATTGCAGATCCAAATAGCCATGGACGTGATGGAAC...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGATACGACAATGCTGTaGCCTTGTTTAAAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASDTTML*PCLKSP
Trigger: AGGAGACTTTAAACAAGGTCACAGCATTGTCGTATC...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTTTTGCTTGGACCTTTaGGATTCTTTTGAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFFCLDL*DSFELF
Trigger: GAACAGCTCAAAAGAATCTCAAAGGTCCAAGCAAAA...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTTTTGCTTGGACCTTTaGGATTCTTTTGAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPAFCLDL*DSFELF
Trigger: GAACAGCTCAAAAGAATCTCAAAGGTCCAAGCAAAA...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGTTAATATGTTTTTCGTaGAGATCCTCAACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQLICFS*RSSTSS
Trigger: GCTGGAGGTTGAGGATCTTCACGAAAAACATATTAA...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTTAATATGTTTTTCGTaGAGATCCTCAACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPALICFS*RSSTSS
Trigger: GCTGGAGGTTGAGGATCTTCACGAAAAACATATTAA...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCACCTTCAGGCGGATTTaGAGATTTTTATCTGACAAC +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFTFRRI*RFLSDN
Trigger: GTTGTCAGATAAAAATCTGCAAATCCGCCTGAAGGT...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCACTGCAGGTTTTGCTTaGACCTTTGAGATTCTTTTG +
Preference number: 4 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFTAGFA*TFEILL
Trigger: CAAAAGAATCTCAAAGGTCCAAGCAAAACCTGCAGT...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGTAGAGAATTTGCCCTaGTCATCTTGGGAGTTCATT +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASVENLP*SSWEFI
Trigger: AATGAACTCCCAAGATGACCAGGGCAAATTCTCTAC...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGGACAAAGTTTATTTTTaGGCCCAAGAGTTTCAGATA +
Preference number: 4 (lower is better)
Translates to: AAAATAYGRGGVSPASGWDKVYF*AQEFQI
Trigger: TATCTGAAACTCTTGGGCCCAAAAATAAACTTTGTC...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTTCTAGCTCTAGAACTTaGATGAGTGCTTTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASSSSRT*MSALES
Trigger: GCTTTCCAAAGCACTCATCCAAGTTCTAGAGCTAGA...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTAGAAAAGATGTAACTTaGCAGGTGTGTTCACCAGAC +
Preference number: 4 (lower is better)
Translates to: FSAAAATAYGRGGVSPASRKDVT*QVCSPD
Trigger: GTCTGGTGAACACACCTGCCAAGTTACATCTTTTCT...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTTCCTTCCAACTGAATaGATATTTGCCAGATGTTAC +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPAFLPTE*IFARCY
Trigger: GTAACATCTGGCAAATATGCATTCAGTTGGAAGGAA...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTGACAAAGTTTATTTTTaGGCCCAAGAGTTTCAGATA +
Preference number: 4 (lower is better)
Translates to: TFSAAAATAYGRGGVSPADKVYF*AQEFQI
Trigger: TATCTGAAACTCTTGGGCCCAAAAATAAACTTTGTC...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAATGCCCGCTGGCCCCGTaGAGCTGCACAGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKCPLAP*SCTGWR
Trigger: CCTCCACCCTGTGCAGCTGCACGGGGCCAGCGGGCA...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAATGTGTTCACCAGACGTaGTGGCTTGGAGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKCVHQT*WLGGLG
Trigger: ACCCAGGCCTCCAAGCCATCACGTCTGGTGAACACA...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTGGGGAGCAGGGTCACTaGAGCTCCTTGAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFGEQGH*SSLSSW
Trigger: CCAGCTGCTCAAGGAGCTGCAGTGACCCTGCTCCCC...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAAGCAGCTGGAGCACGTTaGTCGTGTAGGGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKAAGAR*SCRGSA
Trigger: AGCAGAACCCCTACACGACCAACGTGCTCCAGCTGC...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAAGCTTTGGAAAGCCGCTaGAGATGGGCCACAGAGTTG +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKALESR*RWATEL
Trigger: CAACTCTGTGGCCCATCTCCAGCGGCTTTCCAAAGC...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTCCAGACGTGATGGCTTaGAGGCCTGGGTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFPDVMA*RPGCSI
Trigger: GATGGAGCACCCAGGCCTCCAAGCCATCACGTCTGG...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAAGATCTGCAATGGCAGTaGTGGCTCCACATCTGGACG +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKDLQWQ*WLHIWT
Trigger: CGTCCAGATGTGGAGCCACCACTGCCATTGCAGATC...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAACTGTCTGGGTCTTTGTaGGCTGAACACAGACTGGAC +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKLSGSL*AEHRLD
Trigger: GTCCAGTCTGTGTTCAGCTCACAAAGACCCAGACAG...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTCTGAGTTCCGCAGCATaGCTTCCAGGACCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFLSSAA*LPGPLG
Trigger: CCCCAAAGGTCCTGGAAGTCATGCTGCGGAACTCAG...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAATGTAAGACAGCCAGCTaGAACTTGAAGGCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKCKTAS*NLKASV
Trigger: CACGCTGGCCTTCAAGTTGCAGCTGGCTGTCTTACA...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTATTCACCTTCTCTGCTaGCGCTGCCACCGCCTATGG +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFIHLLC*RCHRLW
Trigger: CCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGAAT...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAAAGACAGGGAGGTGTATaGAGATGGAGGGGAACTGAC +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKRQGGV*RWRGTD
Trigger: GTCAGTTCCCCTCCATCTGCATACACCTCCCTGTCT...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTGATGGCTTGGAGGCCTaGGTGCTCCATCATCAGCTC +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFDGLEA*VLHHQL
Trigger: GAGCTGATGATGGAGCACCCAGGCCTCCAAGCCATC...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTCAGCCTTCCCCTCATTaGGGAAACATCCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFQPSPH*GNILQA
Trigger: AGCCTGCAGGATGTTTCCTCAATGAGGGGAAGGCTG...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAAGACCTTGGATGGTCCTaGCAATCACACTGCAAGAGT +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKDLGWS*QSHCKS
Trigger: ACTCTTGCAGTGTGATTGTCAGGACCATCCAAGGTC...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAAGCTCTAGAACTTGGATaGGTGCTTTGGAAAGCCGCT +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKALELG*VLWKAA
Trigger: AGCGGCTTTCCAAAGCACTCATCCAAGTTCTAGAGC...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAAGCTTGTAGTCGTGTCTaGAGATGCTCCACATTCTCC +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKACSRV*RCSTFS
Trigger: GGAGAATGTGGAGCATCTGCAGACACGACTACAAGC...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAAATGGCTATTTGGATCTaGAATGGCAGTGGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKMAIWI*NGSGGS
Trigger: GGAGCCACCACTGCCATTGCAGATCCAAATAGCCAT...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAACTCTCTTTTGGGACCTaGGGTCTTCAGGGTAAATCG +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKLSFGT*GLQGKS
Trigger: CGATTTACCCTGAAGACCCCAGGTCCCAAAAGAGAG...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAAACAGCCGCAGGTTTTTaGGAGCTGGGTGAATACAGA +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKTAAGF*ELGEYR
Trigger: TCTGTATTCACCCAGCTCCCAAAAACCTGCGGCTGT...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAACGATGTCTTCAGCTGTaGTGGTGCTCTTCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKRCLQL*WCSSQE
Trigger: CTCTTGAGAAGAGCACCACCACAGCTGAAGACATCG...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTAGGTTGAGGCTGCAATaGGCTGTGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFRLRLQ*AVIVPL
Trigger: CAGTGGCACAATCACAGCTCATTGCAGCCTCAACCT...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373448.6
CDS-3UTR TCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAAGGATGCAGAGCCAGATaGCGCAGATTTAAAGAGATC +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKGCRAR*RRFKEI
Trigger: GATCTCTTTAAATCTGCGTCATCTGGCTCTGCATCC...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAACAAAAACTGCCATTGTaGAGCAGCCTTCCCCTCATT +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKQKLPL*SSLPLI
Trigger: AATGAGGGGAAGGCTGCTGCACAATGGCAGTTTTTG...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAAGTAAACCATCAGCTCTaGTACTCTGTGCTCAACTGC +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKVNHQL*YSVLNC
Trigger: GCAGTTGAGCACAGAGTAGCAGAGCTGATGGTTTAC...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAACTTTGCTCTTGGAGGTaGCCAAGATTACCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKLCSWR*PRLPVS
Trigger: AGACACAGGTAATCTTGGGCACCTCCAAGAGCAAAG...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTCTTCAGCTGTGGTGGTaGTCTTCTCAAGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFLQLWW*SSQELL
Trigger: CAGCAGCTCTTGAGAAGAGCACCACCACAGCTGAAG...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTGGTTCCAAGGCTGTGTaGCTGAGGTCTTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFGSKAV*LRSLEK
Trigger: CTTCTCCAAAGACCTCAGCCACACAGCCTTGGAACC...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAACTAATGAGTAGGGTTTaGTCTCCAGCCTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKLMSRV*SPAFSS
Trigger: ACTGGAGAAGGCTGGAGACCAAACCCTACTCATTAG...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTGACTTCCAGGACCTTTaGGGTATGAGGATGCAGAGC +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFDFQDL*GMRMQS
Trigger: GCTCTGCATCCTCATACCCCAAAGGTCCTGGAAGTC...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAACATTCTCATCCACTTTaGGAGGGACTGACTGTTCCT +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKHSHPL*EGLTVP
Trigger: AGGAACAGTCAGTCCCTCCCAAAGTGGATGAGAATG...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTTCCACCTTCATCAAGTaGAGGAAGACGCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFSTFIK*RKTLLA
Trigger: TGCCAGGAGCGTCTTCCTCCACTTGATGAAGGTGGA...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAAACAAGCAGAGAGTTCTaGAAAGAGTTCCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKTSREF*KEFLEK
Trigger: CTTCTCCAGGAACTCTTTTCAGAACTCTCTGCTTGT...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTGACCTTGGATGGTCCTaGCAATCACACTGCAAGAGT +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFDLGWS*QSHCKS
Trigger: ACTCTTGCAGTGTGATTGTCAGGACCATCCAAGGTC...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTAAGCAGGTTAGCATCTaGGTTCCGCAGCATGACTTC +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFKQVSI*VPQHDF
Trigger: GAAGTCATGCTGCGGAACTCAGATGCTAACCTGCTT...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAATGGTTTTTGTGGGACTaGAGAACAACCACACACAGA +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKWFLWD*RTTTHR
Trigger: TCTGTGTGTGGTTGTTCTTCAGTCCCACAAAAACCA...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTGCTTGTAGTCGTGTCTaGAGATGCTCCACATTCTCC +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFACSRV*RCSTFS
Trigger: GGAGAATGTGGAGCATCTGCAGACACGACTACAAGC...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTGCTGCCATCAGAGCATaGAGAACGCTGACAAAGGAA +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFAAIRA*RTLTKE
Trigger: TTCCTTTGTCAGCGTTCTGCATGCTCTGATGGCAGC...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTCTTTGCAGAACCGGCTaGGAAGAAAGTCACCACACT +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFLCRTG*EESHHT
Trigger: AGTGTGGTGACTTTCTTCGCAGCCGGTTCTGCAAAG...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTACAGCCGCAGGTTTTTaGGAGCTGGGTGAATACAGA +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFTAAGF*ELGEYR
Trigger: TCTGTATTCACCCAGCTCCCAAAAACCTGCGGCTGT...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTTTGCCCTGGTCATCTTaGGAGTTCATTAGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFLPWSS*EFIRRG
Trigger: TCCTCGCCTAATGAACTCCCAAGATGACCAGGGCAA...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTCGATGTCTTCAGCTGTaGTGGTGCTCTTCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFRCLQL*WCSSQE
Trigger: CTCTTGAGAAGAGCACCACCACAGCTGAAGACATCG...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAATTATCTGACAACAAGTaGATGCAGCGTTCCATCACG +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKLSDNK*MQRSIT
Trigger: CGTGATGGAACGCTGCATCCACTTGTTGTCAGATAA...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAAAAGAAAGGACAAATGTaGGGCATTCCACCACACTTT +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKKKGQM*GIPPHF
Trigger: AAAGTGTGGTGGAATGCCTCACATTTGTCCTTTCTT...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTGTTCCTCAACAATCTTaGTGTCAGCCACGTCTAGCT +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFVPQQS*CQPRLA
Trigger: AGCTAGACGTGGCTGACATCAAGATTGTTGAGGAAC...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAAAGATTCTCTCATCAGTaGAGAAGCGGAAATATCTCC +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKRFSHQ*RSGNIS
Trigger: GGAGATATTTCCGCTTCTTCACTGATGAGAGAATCT...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTGGATGCAGAGCCAGATaGCGCAGATTTAAAGAGATC +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFGCRAR*RRFKEI
Trigger: GATCTCTTTAAATCTGCGTCATCTGGCTCTGCATCC...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAAGGTCTTTGGTTCAAATaGCTTCCCTCTTCTCCTAAA +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKGLWFK*LPSSPK
Trigger: TTTAGGAGAAGAGGGAAGTCATTTGAACCAAAGACC...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAACCACATCCTTCTCTTTaGGGTAGTTCAGCAAAAACT +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKPHPSL*GSSAKT
Trigger: AGTTTTTGCTGAACTACCTCAAAGAGAAGGATGTGG...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTAGCTCTGCTACTCTGTaGTCAACTGCAGGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFSSATL*STAGFA
Trigger: AGCAAAACCTGCAGTTGAGCACAGAGTAGCAGAGCT...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAACGACCAATGATTGACTaGACTTCAAAAGAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKRPMID*TSKEGP
Trigger: AGGACCTTCTTTTGAAGTGCAGTCAATCATTGGTCG...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTCTTTGCTCTTGGAGGTaGCCAAGATTACCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFLCSWR*PRLPVS
Trigger: AGACACAGGTAATCTTGGGCACCTCCAAGAGCAAAG...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp CAGAAGCAACCTAAATGTCCTACAGGGGATGGACACTTAGTAACAGCTATTAAAAAAAGGGTACACAGCTaGAACCACGGAAAAACAGTT +
Preference number: 4 (lower is better)
Translates to: QKQPKCPTGDGHLVTAIKKRVHS*NHGKTV
Trigger: AACTGTTTTTCCGTGGTTGCAGCTGTGTACCCTTTT...TTTAATAGCTGTTACTAAGTGTCCATCCCCTGTAGGACATTTAGGTTGCTTCTG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000620381.1
CDS-3UTR CCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAACATTCCACCACACTTTaGATCAAACGCTCTCTTTTG +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKHSTTL*IKRSLL
Trigger: CAAAAGAGAGCGTTTGATCCAAAGTGTGGTGGAATG...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTACGTCCATGGCTATTTaGATCTGCAATGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFTSMAI*ICNGSG
Trigger: ACCACTGCCATTGCAGATCCAAATAGCCATGGACGT...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAACATAAAAAGTCAGAATaGTGTCCCCATAAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKHKKSE*CPHKLS
Trigger: ACTCAGCTTATGGGGACATCATTCTGACTTTTTATG...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTGCTCTTCTCAAGAGCTaGTGGTCTTTGGTTCAAATG +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFALLKS*WSLVQM
Trigger: CATTTGAACCAAAGACCAGCAGCTCTTGAGAAGAGC...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAAACCTTCAGGCGGATTTaGAGATTTTTATCTGACAAC +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKTFRRI*RFLSDN
Trigger: GTTGTCAGATAAAAATCTGCAAATCCGCCTGAAGGT...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAAACTGCAGGTTTTGCTTaGACCTTTGAGATTCTTTTG +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKTAGFA*TFEILL
Trigger: CAAAAGAATCTCAAAGGTCCAAGCAAAACCTGCAGT...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTAAAATTGGTCCAGGGTaGCCAAGACATCTTGAACCA +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFKIGPG*PRHLEP
Trigger: TGGTTCAAGATGTCTTGGCCACCCTGGACCAATTTT...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTTTATCTGACAACAAGTaGATGCAGCGTTCCATCACG +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFLSDNK*MQRSIT
Trigger: CGTGATGGAACGCTGCATCCACTTGTTGTCAGATAA...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR TCA 90 bp CACTGTTTATTAGAGTTATTATTAAGCCAGAAGCAACCTAAATGTCCTACAGGGCCACATCCTTCTCTTTaGGGTAGTTCAGCAAAAACT +
Preference number: 4 (lower is better)
Translates to: HCLLELLLSQKQPKCPTGPHPSL*GSSAKT
Trigger: AGTTTTTGCTGAACTACCTCAAAGAGAAGGATGTGG...CCCTGTAGGACATTTAGGTTGCTTCTGGCTTAATAATAACTCTAATAAACAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620381.1
CDS-3UTR TCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTTTGCAGATTTTTATCTaGCAACAAGTGGATGCAGCG +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFLQIFI*QQVDAA
Trigger: CGCTGCATCCACTTGTTGTCAGATAAAAATCTGCAA...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR GCA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAATTCCTTCCAACTGAATaGATATTTGCCAGATGTTAC +
Preference number: 4 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKFLPTE*IFARCY
Trigger: GTAACATCTGGCAAATATGCATTCAGTTGGAAGGAA...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTCATTCCACCACACTTTaGATCAAACGCTCTCTTTTG +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFHSTTL*IKRSLL
Trigger: CAAAAGAGAGCGTTTGATCCAAAGTGTGGTGGAATG...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTAATGTGCTAAGTCCCTaGATCACAGCCAATTTCAAC +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFNVLSP*ITANFN
Trigger: GTTGAAATTGGCTGTGATCCAGGGACTTAGCACATT...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTTTATTGCACTGGGCTTaGATTTCAGGACTCTCATCA +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFLLHWA*ISGLSS
Trigger: TGATGAGAGTCCTGAAATCCAAGCCCAGTGCAATAA...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CCA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTGACAAAGTTTATTTTTaGGCCCAAGAGTTTCAGATA +
Preference number: 4 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFDKVYF*AQEFQI
Trigger: TATCTGAAACTCTTGGGCCCAAAAATAAACTTTGTC...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGACAGCCAGCTGCAACTaGAAGGCCAGCGTGTGCGAG +
Preference number: 5 (lower is better)
Translates to: AAAATAYGRGGVSPASGWTASCN*KASVCE
Trigger: CTCGCACACGCTGGCCTTCAAGTTGCAGCTGGCTGT...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGGCAGCCTTCCCCTCATaGAGGAAACATCCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: AAAATAYGRGGVSPASGWAAFPS*RKHPAG
Trigger: GCCTGCAGGATGTTTCCTCAATGAGGGGAAGGCTGC...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCACAGCCAGCTGCAACTaGAAGGCCAGCGTGTGCGAG +
Preference number: 5 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSTASCN*KASVCE
Trigger: CTCGCACACGCTGGCCTTCAAGTTGCAGCTGGCTGT...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCACCAGACGTGATGGCTaGGAGGCCTGGGTGCTCCAT +
Preference number: 5 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFTRRDG*EAWVLH
Trigger: ATGGAGCACCCAGGCCTCCAAGCCATCACGTCTGGT...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGACCAGACGTGATGGCTaGGAGGCCTGGGTGCTCCAT +
Preference number: 5 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLTRRDG*EAWVLH
Trigger: ATGGAGCACCCAGGCCTCCAAGCCATCACGTCTGGT...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTGCAGCCTTCCCCTCATaGAGGAAACATCCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: TFSAAAATAYGRGGVSPAAAFPS*RKHPAG
Trigger: GCCTGCAGGATGTTTCCTCAATGAGGGGAAGGCTGC...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTACCAGACGTGATGGCTaGGAGGCCTGGGTGCTCCAT +
Preference number: 5 (lower is better)
Translates to: FSAAAATAYGRGGVSPASTRRDG*EAWVLH
Trigger: ATGGAGCACCCAGGCCTCCAAGCCATCACGTCTGGT...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGGGTGGCCAAGACATCTaGAACCACATCTGCCACCAA +
Preference number: 5 (lower is better)
Translates to: AAAATAYGRGGVSPASGWGGQDI*NHICHQ
Trigger: TTGGTGGCAGATGTGGTTCAAGATGTCTTGGCCACC...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGCGTTCCTCAACAATCTaGATGTCAGCCACGTCTAGC +
Preference number: 5 (lower is better)
Translates to: AAAATAYGRGGVSPASGWRSSTI*MSATSS
Trigger: GCTAGACGTGGCTGACATCAAGATTGTTGAGGAACG...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCCACGTCCATGGCTATTaGGATCTGCAATGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSHVHGY*DLQWQW
Trigger: CCACTGCCATTGCAGATCCAAATAGCCATGGACGTG...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTATCAAAAACTGCCATaGTGCAGCAGCCTTCCCCTC +
Preference number: 5 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSYQKLP*CSSLPL
Trigger: GAGGGGAAGGCTGCTGCACAATGGCAGTTTTTGATA...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGATCAAACGCTCTCTTTaGGGACCTGGGGTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQIKRSL*GPGVFR
Trigger: CCTGAAGACCCCAGGTCCCAAAAGAGAGCGTTTGAT...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGGTTCATCCAATGACCTaGGATGGTCCTGACAATCAC +
Preference number: 5 (lower is better)
Translates to: AAAATAYGRGGVSPASGWVHPMT*DGPDNH
Trigger: GTGATTGTCAGGACCATCCAAGGTCATTGGATGAAC...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTACTTGGATGAGTGCTTaGGAAAGCCGCTGGAGATGG +
Preference number: 5 (lower is better)
Translates to: TFSAAAATAYGRGGVSPATWMSA*ESRWRW
Trigger: CCATCTCCAGCGGCTTTCCAAAGCACTCATCCAAGT...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGACTTGGATGAGTGCTTaGGAAAGCCGCTGGAGATGG +
Preference number: 5 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLTWMSA*ESRWRW
Trigger: CCATCTCCAGCGGCTTTCCAAAGCACTCATCCAAGT...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGGTGGCCAAGACATCTaGAACCACATCTGCCACCAA +
Preference number: 5 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLGGQDI*NHICHQ
Trigger: TTGGTGGCAGATGTGGTTCAAGATGTCTTGGCCACC...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTCACGTCCATGGCTATTaGGATCTGCAATGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: TFSAAAATAYGRGGVSPAHVHGY*DLQWQW
Trigger: CCACTGCCATTGCAGATCCAAATAGCCATGGACGTG...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCAGGGTACGTAAAACCTaGAAGGCTCTAAGCACTGCC +
Preference number: 5 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSRVRKT*KALSTA
Trigger: GGCAGTGCTTAGAGCCTTCAAGGTTTTACGTACCCT...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp GCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTGGAGAAAGTCACCACACTaGCTTCCCAGGGTACGTAAA +
Preference number: 5 (lower is better)
Translates to: AAAATAYGRGGVSPASGWRKSPH*LPRVRK
Trigger: TTTACGTACCCTGGGAAGCAAGTGTGGTGACTTTCT...CCAGCCAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTTTGGCAGGACATCTTaGCAGAACCGGCTGCGAAGA +
Preference number: 5 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFFGRTS*QNRLRR
Trigger: TCTTCGCAGCCGGTTCTGCAAAGATGTCCTGCCAAA...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGTTTGGCAGGACATCTTaGCAGAACCGGCTGCGAAGA +
Preference number: 5 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQFGRTS*QNRLRR
Trigger: TCTTCGCAGCCGGTTCTGCAAAGATGTCCTGCCAAA...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTTTGGCAGGACATCTTaGCAGAACCGGCTGCGAAGA +
Preference number: 5 (lower is better)
Translates to: TFSAAAATAYGRGGVSPAFGRTS*QNRLRR
Trigger: TCTTCGCAGCCGGTTCTGCAAAGATGTCCTGCCAAA...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGATGTCAGCGAGGGCTTaGTTGCCCACCACTACTTTT +
Preference number: 5 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQMSARA*LPTTTF
Trigger: AAAAGTAGTGGTGGGCAACAAAGCCCTCGCTGACAT...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp CACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCGAAAGAGTAGAGAATTaGCCCTGGTCATCTTGGGAG +
Preference number: 5 (lower is better)
Translates to: HLLCCRCHRLWPGWGQPSERVEN*PWSSWE
Trigger: CTCCCAAGATGACCAGGGCAAATTCTCTACTCTTTC...GCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTACTTGGATGAGTGCTTaGGAAAGCCGCTGGAGATGG +
Preference number: 5 (lower is better)
Translates to: FSAAAATAYGRGGVSPASTWMSA*ESRWRW
Trigger: CCATCTCCAGCGGCTTTCCAAAGCACTCATCCAAGT...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCCGTTCCTCAACAATCTaGATGTCAGCCACGTCTAGC +
Preference number: 5 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFRSSTI*MSATSS
Trigger: GCTAGACGTGGCTGACATCAAGATTGTTGAGGAACG...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTAAGGATCATGGCAGCTaGCTTCCGGTAAACCACAGA +
Preference number: 5 (lower is better)
Translates to: TFSAAAATAYGRGGVSPAKDHGS*LPVNHR
Trigger: TCTGTGGTTTACCGGAAGCAAGCTGCCATGATCCTT...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGTGGCCAAGACATCTaGAACCACATCTGCCACCAA +
Preference number: 5 (lower is better)
Translates to: FSAAAATAYGRGGVSPASGGQDI*NHICHQ
Trigger: TTGGTGGCAGATGTGGTTCAAGATGTCTTGGCCACC...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTCATTCTCATCCACTTaGGGAGGGACTGACTGTTCC +
Preference number: 5 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFSFSST*GGTDCS
Trigger: GGAACAGTCAGTCCCTCCCAAAGTGGATGAGAATGA...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTCACGTCCATGGCTATTaGGATCTGCAATGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: FSAAAATAYGRGGVSPASHVHGY*DLQWQW
Trigger: CCACTGCCATTGCAGATCCAAATAGCCATGGACGTG...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGAGGGTACGTAAAACCTaGAAGGCTCTAAGCACTGCC +
Preference number: 5 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLRVRKT*KALSTA
Trigger: GGCAGTGCTTAGAGCCTTCAAGGTTTTACGTACCCT...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGAGGGTACGTAAAACCTaGAAGGCTCTAAGCACTGCC +
Preference number: 5 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQRVRKT*KALSTA
Trigger: GGCAGTGCTTAGAGCCTTCAAGGTTTTACGTACCCT...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTTATCAAAAACTGCCATaGTGCAGCAGCCTTCCCCTC +
Preference number: 5 (lower is better)
Translates to: FSAAAATAYGRGGVSPASYQKLP*CSSLPL
Trigger: GAGGGGAAGGCTGCTGCACAATGGCAGTTTTTGATA...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGTTCATCCAATGACCTaGGATGGTCCTGACAATCAC +
Preference number: 5 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLVHPMT*DGPDNH
Trigger: GTGATTGTCAGGACCATCCAAGGTCATTGGATGAAC...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGGCTCAACTGCAGGTTTaGCTTGGACCTTTGAGATTC +
Preference number: 5 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQAQLQV*LGPLRF
Trigger: GAATCTCAAAGGTCCAAGCAAAACCTGCAGTTGAGC...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGCTCAACTGCAGGTTTaGCTTGGACCTTTGAGATTC +
Preference number: 5 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLAQLQV*LGPLRF
Trigger: GAATCTCAAAGGTCCAAGCAAAACCTGCAGTTGAGC...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGAAAGAGTAGAGAATTaGCCCTGGTCATCTTGGGAG +
Preference number: 5 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLERVEN*PWSSWE
Trigger: CTCCCAAGATGACCAGGGCAAATTCTCTACTCTTTC...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTCGTTCCTCAACAATCTaGATGTCAGCCACGTCTAGC +
Preference number: 5 (lower is better)
Translates to: FSAAAATAYGRGGVSPASRSSTI*MSATSS
Trigger: GCTAGACGTGGCTGACATCAAGATTGTTGAGGAACG...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGGTGTGGCTGAGGTCTTaGGAGAAGCATTCAGATCAT +
Preference number: 5 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQVWLRS*EKHSDH
Trigger: ATGATCTGAATGCTTCTCCAAAGACCTCAGCCACAC...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTAAGGATCATGGCAGCTaGCTTCCGGTAAACCACAGA +
Preference number: 5 (lower is better)
Translates to: FSAAAATAYGRGGVSPASKDHGS*LPVNHR
Trigger: TCTGTGGTTTACCGGAAGCAAGCTGCCATGATCCTT...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTCTCTTATCGTAAAATaGGTCCAGGGTGGCCAAGAC +
Preference number: 5 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFSLIVK*VQGGQD
Trigger: GTCTTGGCCACCCTGGACCAATTTTACGATAAGAGA...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGAAGAGCTGCTGGTCTTaGGTTCAAATGACTTCCCTC +
Preference number: 5 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLKSCWS*VQMTSL
Trigger: GAGGGAAGTCATTTGAACCAAAGACCAGCAGCTCTT...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCAAGAGCTGCTGGTCTTaGGTTCAAATGACTTCCCTC +
Preference number: 5 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFKSCWS*VQMTSL
Trigger: GAGGGAAGTCATTTGAACCAAAGACCAGCAGCTCTT...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTTCATTCTCATCCACTTaGGGAGGGACTGACTGTTCC +
Preference number: 5 (lower is better)
Translates to: FSAAAATAYGRGGVSPASSFSST*GGTDCS
Trigger: GGAACAGTCAGTCCCTCCCAAAGTGGATGAGAATGA...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CCA 90 bp CTGCACGGGGCAGTAAAGCTCGTTCAGGAGGAACCAGGTGGAGTCTaGGTCCACCTTCATCAAGTGGAGGAAGACGCTCCTGGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: LHGAVKLVQEEPGGV*VHLHQVEEDAPGSL
Trigger: GAGGCTGCCAGGAGCGTCTTCCTCCACTTGATGAAGGTGGACCCAGACTCCACCTGGTTCCTCCTGAACGAGCTTTACTGCCCCGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTTTATTGCACTGGGCTaGGATTTCAGGACTCTCATC +
Preference number: 5 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFFIALG*DFRTLI
Trigger: GATGAGAGTCCTGAAATCCAAGCCCAGTGCAATAAA...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGAAAGAGTAGAGAATTaGCCCTGGTCATCTTGGGAG +
Preference number: 5 (lower is better)
Translates to: FSAAAATAYGRGGVSPASERVEN*PWSSWE
Trigger: CTCCCAAGATGACCAGGGCAAATTCTCTACTCTTTC...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGTGTGGCTGAGGTCTTaGGAGAAGCATTCAGATCAT +
Preference number: 5 (lower is better)
Translates to: FSAAAATAYGRGGVSPASVWLRS*EKHSDH
Trigger: ATGATCTGAATGCTTCTCCAAAGACCTCAGCCACAC...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTTCTCTTATCGTAAAATaGGTCCAGGGTGGCCAAGAC +
Preference number: 5 (lower is better)
Translates to: FSAAAATAYGRGGVSPASSLIVK*VQGGQD
Trigger: GTCTTGGCCACCCTGGACCAATTTTACGATAAGAGA...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTAAGAGCTGCTGGTCTTaGGTTCAAATGACTTCCCTC +
Preference number: 5 (lower is better)
Translates to: FSAAAATAYGRGGVSPASKSCWS*VQMTSL
Trigger: GAGGGAAGTCATTTGAACCAAAGACCAGCAGCTCTT...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGGACAATGCTGTGACCTaGTTTAAAGTCTCCTGTGAT +
Preference number: 5 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQDNAVT*FKVSCD
Trigger: ATCACAGGAGACTTTAAACAAGGTCACAGCATTGTC...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCGACAATGCTGTGACCTaGTTTAAAGTCTCCTGTGAT +
Preference number: 5 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFDNAVT*FKVSCD
Trigger: ATCACAGGAGACTTTAAACAAGGTCACAGCATTGTC...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TCACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGGTTCCATCTCATTATTaGAAGACAGGGAGGTGTATG +
Preference number: 5 (lower is better)
Translates to: SPSLLPLPPPMAGVGSAQVPSHY*KTGRCM
Trigger: CATACACCTCCCTGTCTTCAAATAATGAGATGGAAC...CTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGACAATGCTGTGACCTaGTTTAAAGTCTCCTGTGAT +
Preference number: 5 (lower is better)
Translates to: FSAAAATAYGRGGVSPASDNAVT*FKVSCD
Trigger: ATCACAGGAGACTTTAAACAAGGTCACAGCATTGTC...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCGGACAAAGTTTATTTTaGGGCCCAAGAGTTTCAGAT +
Preference number: 5 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFGQSLF*GPRVSD
Trigger: ATCTGAAACTCTTGGGCCCAAAAATAAACTTTGTCC...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGAGATGGGCCACAGAGTaGAGGACAAAGTTTATTTTT +
Preference number: 5 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLRWATE*RTKFIF
Trigger: AAAAATAAACTTTGTCCTCAACTCTGTGGCCCATCT...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp ACCTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTCCGGTAAACCACAGATaGATGGTAAAGTTCCATAAA +
Preference number: 5 (lower is better)
Translates to: TFSAAAATAYGRGGVSPAPVNHR*MVKFHK
Trigger: TTTATGGAACTTTACCATCAATCTGTGGTTTACCGG...AGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGCCGGTAAACCACAGATaGATGGTAAAGTTCCATAAA +
Preference number: 5 (lower is better)
Translates to: SLLPLPPPMAGVGSAQLLPVNHR*MVKFHK
Trigger: TTTATGGAACTTTACCATCAATCTGTGGTTTACCGG...CAGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp CTTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCACCAGACAATGTCACTaGACAACACAAGGTATGAAA +
Preference number: 5 (lower is better)
Translates to: LLCCRCHRLWPGWGQPSFTRQCH*TTQGMK
Trigger: TTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGT...GAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGTTCCATCTCATTATTaGAAGACAGGGAGGTGTATG +
Preference number: 5 (lower is better)
Translates to: FSAAAATAYGRGGVSPASVPSHY*KTGRCM
Trigger: CATACACCTCCCTGTCTTCAAATAATGAGATGGAAC...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTGGACAAAGTTTATTTTaGGGCCCAAGAGTTTCAGAT +
Preference number: 5 (lower is better)
Translates to: FSAAAATAYGRGGVSPASGQSLF*GPRVSD
Trigger: ATCTGAAACTCTTGGGCCCAAAAATAAACTTTGTCC...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp TTCTCTGCTGCCGCTGCCACCGCCTATGGCCGGGGTGGGGTCAGCCCAGCTTCTACCAGACAATGTCACTaGACAACACAAGGTATGAAA +
Preference number: 5 (lower is better)
Translates to: FSAAAATAYGRGGVSPASTRQCH*TTQGMK
Trigger: TTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGT...AGAAGCTGGGCTGACCCCACCCCGGCCATAGGCGGTGGCAGCGGCAGCAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS GCA 90 bp CTAGGGAGCCAGCCAGCTTTGGCAGGACATCTTTGCAGAACCGGCTaGGAAGAAAGTCACCACACTTGCTTCCCAGGGTACGTAAAACCT +
Preference number: 5 (lower is better)
Translates to: LGSQPALAGHLCRTG*EESHHTCFPGYVKP
Trigger: AGGTTTTACGTACCCTGGGAAGCAAGTGTGGTGACTTTCTTCGCAGCCGGTTCTGCAAAGATGTCCTGCCAAAGCTGGCTGGCTCCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
ENST00000473288.1
CDS CCA 90 bp GCGTTCCATCACGTCCATGGCTATTTGGATCTGCAATGGCAGTGGTaGCTCCACATCTGGACGGGTGTCATTCTCATCCACTTTGGGAGG +
Preference number: 5 (lower is better)
Translates to: AFHHVHGYLDLQWQW*LHIWTGVILIHFGR
Trigger: CCTCCCAAAGTGGATGAGAATGACACCCGTCCAGATGTGGAGCCACCACTGCCATTGCAGATCCAAATAGCCATGGACGTGATGGAACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CCA 90 bp GCAGCGTTCCATCACGTCCATGGCTATTTGGATCTGCAATGGCAGTaGTGGCTCCACATCTGGACGGGTGTCATTCTCATCCACTTTGGG +
Preference number: 5 (lower is better)
Translates to: AAFHHVHGYLDLQWQ*WLHIWTGVILIHFG
Trigger: CCCAAAGTGGATGAGAATGACACCCGTCCAGATGTGGAGCCACCACTGCCATTGCAGATCCAAATAGCCATGGACGTGATGGAACGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CCA 90 bp GTGGATGCAGCGTTCCATCACGTCCATGGCTATTTGGATCTGCAATaGCAGTGGTGGCTCCACATCTGGACGGGTGTCATTCTCATCCAC +
Preference number: 5 (lower is better)
Translates to: VDAAFHHVHGYLDLQ*QWWLHIWTGVILIH
Trigger: GTGGATGAGAATGACACCCGTCCAGATGTGGAGCCACCACTGCCATTGCAGATCCAAATAGCCATGGACGTGATGGAACGCTGCATCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS TCA 90 bp GTCGTGTCTGCAGATGCTCCACATTCTCCACTGTCTGGGTCTTTGTaGGCTGAACACAGACTGGACGTAAGACACCAAAGGCCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: VVSADAPHSPLSGSL*AEHRLDVRHQRPPQ
Trigger: CTGAGGAGGCCTTTGGTGTCTTACGTCCAGTCTGTGTTCAGCTCACAAAGACCCAGACAGTGGAGAATGTGGAGCATCTGCAGACACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
ENST00000487362.1
CDS CCA 90 bp TGTAACTTGGCAGGTGTGTTCACCAGACGTGATGGCTTGGAGGCCTaGGTGCTCCATCATCAGCTCCTCTCCCATTTCCTCAGTTTCAAG +
Preference number: 5 (lower is better)
Translates to: CNLAGVFTRRDGLEA*VLHHQLLSHFLSFK
Trigger: CTTGAAACTGAGGAAATGGGAGAGGAGCTGATGATGGAGCACCCAGGCCTCCAAGCCATCACGTCTGGTGAACACACCTGCCAAGTTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
ENST00000487362.1
CDS CCA 90 bp TCTGACAACAAGTGGATGCAGCGTTCCATCACGTCCATGGCTATTTaGATCTGCAATGGCAGTGGTGGCTCCACATCTGGACGGGTGTCA +
Preference number: 5 (lower is better)
Translates to: SDNKWMQRSITSMAI*ICNGSGGSTSGRVS
Trigger: TGACACCCGTCCAGATGTGGAGCCACCACTGCCATTGCAGATCCAAATAGCCATGGACGTGATGGAACGCTGCATCCACTTGTTGTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS TCA 90 bp GTCTGCAGATGCTCCACATTCTCCACTGTCTGGGTCTTTGTGAGCTaGACACAGACTGGACGTAAGACACCAAAGGCCTCCTCAGGAGTA +
Preference number: 5 (lower is better)
Translates to: VCRCSTFSTVWVFVS*TQTGRKTPKASSGV
Trigger: TACTCCTGAGGAGGCCTTTGGTGTCTTACGTCCAGTCTGTGTTCAGCTCACAAAGACCCAGACAGTGGAGAATGTGGAGCATCTGCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
ENST00000487362.1
CDS TCA 90 bp GAAGCGGAAATATCTCCTCTGGATGCGGTTCCAAGGCTGTGTGGCTaGGGTCTTTGGAGAAGCATTCAGATCATCAGAGTTCCAACGCCG +
Preference number: 5 (lower is better)
Translates to: EAEISPLDAVPRLCG*GLWRSIQIIRVPTP
Trigger: CGGCGTTGGAACTCTGATGATCTGAATGCTTCTCCAAAGACCTCAGCCACACAGCCTTGGAACCGCATCCAGAGGAGATATTTCCGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
ENST00000487362.1
CDS TCA 90 bp CTGGGAACCACTGGGCTAATGCTGCCATCAGAGCATGCAGAACGCTaGCAAAGGAAGCAGCTCTCTTATCGTAAAATTGGTCCAGGGTGG +
Preference number: 5 (lower is better)
Translates to: LGTTGLMLPSEHAER*QRKQLSYRKIGPGW
Trigger: CCACCCTGGACCAATTTTACGATAAGAGAGCTGCTTCCTTTGTCAGCGTTCTGCATGCTCTGATGGCAGCATTAGCCCAGTGGTTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS GCA 90 bp TCATCTTGGGAGTTCATTAGGCGAGGAAGAGATGTGGCAAGGGAATaGAGGCTTTCTGACAAGATGTCAGCGAGGGCTTTGTTGCCCACC +
Preference number: 5 (lower is better)
Translates to: SSWEFIRRGRDVARE*RLSDKMSARALLPT
Trigger: GGTGGGCAACAAAGCCCTCGCTGACATCTTGTCAGAAAGCCTGCATTCCCTTGCCACATCTCTTCCTCGCCTAATGAACTCCCAAGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS GCA 90 bp AACAAGTGGATGCAGCGTTCCATCACGTCCATGGCTATTTGGATCTaGAATGGCAGTGGTGGCTCCACATCTGGACGGGTGTCATTCTCA +
Preference number: 5 (lower is better)
Translates to: NKWMQRSITSMAIWI*NGSGGSTSGRVSFS
Trigger: TGAGAATGACACCCGTCCAGATGTGGAGCCACCACTGCCATTGCAGATCCAAATAGCCATGGACGTGATGGAACGCTGCATCCACTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS GCA 90 bp GTAAGACACCAAAGGCCTCCTCAGGAGTATCAAAAACTGCCATTGTaGAGCAGCCTTCCCCTCATTGAGGAAACATCCTGCAGGCTCGTC +
Preference number: 5 (lower is better)
Translates to: VRHQRPPQEYQKLPL*SSLPLIEETSCRLV
Trigger: GACGAGCCTGCAGGATGTTTCCTCAATGAGGGGAAGGCTGCTGCACAATGGCAGTTTTTGATACTCCTGAGGAGGCCTTTGGTGTCTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373447.8
CDS GCA 90 bp GTAAGACACCAAAGGCCTCCTCAGGAGTATCAAAAACTGCCATTGTaGAGCAGCCTTCCCCTCATTGAGGAAACATCCTGCAGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: VRHQRPPQEYQKLPL*SSLPLIEETSCRLE
Trigger: CTCCAGCCTGCAGGATGTTTCCTCAATGAGGGGAAGGCTGCTGCACAATGGCAGTTTTTGATACTCCTGAGGAGGCCTTTGGTGTCTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449821.1
CDS CCA 90 bp GAGGCATTCCACCACACTTTGGATCAAACGCTCTCTTTTGGGACCTaGGGTCTTCAGGGTAAATCGCAGAGGGAAGAGGATGTACTGCTG +
Preference number: 5 (lower is better)
Translates to: EAFHHTLDQTLSFGT*GLQGKSQREEDVLL
Trigger: CAGCAGTACATCCTCTTCCCTCTGCGATTTACCCTGAAGACCCCAGGTCCCAAAAGAGAGCGTTTGATCCAAAGTGTGGTGGAATGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS GCA 90 bp GTAAGACACCAAAGGCCTCCTCAGGAGTATCAAAAACTGCCATTGTaGAGCAGCCTTCCCCTCATTGAGGAAACATCCTGCAGGCTAGGT +
Preference number: 5 (lower is better)
Translates to: VRHQRPPQEYQKLPL*SSLPLIEETSCRLG
Trigger: ACCTAGCCTGCAGGATGTTTCCTCAATGAGGGGAAGGCTGCTGCACAATGGCAGTTTTTGATACTCCTGAGGAGGCCTTTGGTGTCTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373448.6
CDS CCA 90 bp ATTTGCCCTGGTCATCTTGGGAGTTCATTAGGCGAGGAAGAGATGTaGCAAGGGAATGCAGGCTTTCTGACAAGATGTCAGCGAGGGCTT +
Preference number: 5 (lower is better)
Translates to: ICPGHLGSSLGEEEM*QGNAGFLTRCQRGL
Trigger: AAGCCCTCGCTGACATCTTGTCAGAAAGCCTGCATTCCCTTGCCACATCTCTTCCTCGCCTAATGAACTCCCAAGATGACCAGGGCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CCA 90 bp GCCACGTCTAGCTCTAGAACTTGGATGAGTGCTTTGGAAAGCCGCTaGAGATGGGCCACAGAGTTGAGGACAAAGTTTATTTTTGGGCCC +
Preference number: 5 (lower is better)
Translates to: ATSSSRTWMSALESR*RWATELRTKFIFGP
Trigger: GGGCCCAAAAATAAACTTTGTCCTCAACTCTGTGGCCCATCTCCAGCGGCTTTCCAAAGCACTCATCCAAGTTCTAGAGCTAGACGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CCA 90 bp CGTTCCTCAACAATCTTGATGTCAGCCACGTCTAGCTCTAGAACTTaGATGAGTGCTTTGGAAAGCCGCTGGAGATGGGCCACAGAGTTG +
Preference number: 5 (lower is better)
Translates to: RSSTILMSATSSSRT*MSALESRWRWATEL
Trigger: CAACTCTGTGGCCCATCTCCAGCGGCTTTCCAAAGCACTCATCCAAGTTCTAGAGCTAGACGTGGCTGACATCAAGATTGTTGAGGAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CCA 90 bp CAAATAGTGGGACTTGGCTTTGAGAAGGCTAGAAAAGATGTAACTTaGCAGGTGTGTTCACCAGACGTGATGGCTTGGAGGCCTGGGTGC +
Preference number: 5 (lower is better)
Translates to: QIVGLGFEKARKDVT*QVCSPDVMAWRPGC
Trigger: GCACCCAGGCCTCCAAGCCATCACGTCTGGTGAACACACCTGCCAAGTTACATCTTTTCTAGCCTTCTCAAAGCCAAGTCCCACTATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
ENST00000487362.1
CDS TCA 90 bp CCCACTAAGGCCTTCAGAAGGGGACCAGCACATTCGACCAATGATTaGCTGCACTTCAAAAGAAGGTCCTCCACAAGTTCTACCAGTTCC +
Preference number: 5 (lower is better)
Translates to: PTKAFRRGPAHSTND*LHFKRRSSTSSTSS
Trigger: GGAACTGGTAGAACTTGTGGAGGACCTTCTTTTGAAGTGCAGTCAATCATTGGTCGAATGTGCTGGTCCCCTTCTGAAGGCCTTAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS TCA 90 bp GCTGTGGTGGTGCTCTTCTCAAGAGCTGCTGGTCTTTGGTTCAAATaGCTTCCCTCTTCTCCTAAACTTTGCTCTTGGAGGTGCCCAAGA +
Preference number: 5 (lower is better)
Translates to: AVVVLFSRAAGLWFK*LPSSPKLCSWRCPR
Trigger: TCTTGGGCACCTCCAAGAGCAAAGTTTAGGAGAAGAGGGAAGTCATTTGAACCAAAGACCAGCAGCTCTTGAGAAGAGCACCACCACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CCA 90 bp CAGCCAATTTCAACTCCTCGGACACAGCCGCAGGTTTTTGGGAGCTaGGTGAATACAGACAAGCAGAGAGTTCTGAAAAGAGTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: QPISTPRTQPQVFGS*VNTDKQRVLKRVPG
Trigger: TCCAGGAACTCTTTTCAGAACTCTCTGCTTGTCTGTATTCACCCAGCTCCCAAAAACCTGCGGCTGTGTCCGAGGAGTTGAAATTGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CCA 90 bp GCAGTGGTGGCTCCACATCTGGACGGGTGTCATTCTCATCCACTTTaGGAGGGACTGACTGTTCCTCTTCTTCATTATCAAAATCCGAGA +
Preference number: 5 (lower is better)
Translates to: AVVAPHLDGCHSHPL*EGLTVPLLHYQNPR
Trigger: TCTCGGATTTTGATAATGAAGAAGAGGAACAGTCAGTCCCTCCCAAAGTGGATGAGAATGACACCCGTCCAGATGTGGAGCCACCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS GCA 90 bp CTAAGGCCTTCAGAAGGGGACCAGCACATTCGACCAATGATTGACTaGACTTCAAAAGAAGGTCCTCCACAAGTTCTACCAGTTCCAGTC +
Preference number: 5 (lower is better)
Translates to: LRPSEGDQHIRPMID*TSKEGPPQVLPVPV
Trigger: GACTGGAACTGGTAGAACTTGTGGAGGACCTTCTTTTGAAGTGCAGTCAATCATTGGTCGAATGTGCTGGTCCCCTTCTGAAGGCCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CCA 90 bp TGGATCACAGCCAATTTCAACTCCTCGGACACAGCCGCAGGTTTTTaGGAGCTGGGTGAATACAGACAAGCAGAGAGTTCTGAAAAGAGT +
Preference number: 5 (lower is better)
Translates to: WITANFNSSDTAAGF*ELGEYRQAESSEKS
Trigger: ACTCTTTTCAGAACTCTCTGCTTGTCTGTATTCACCCAGCTCCCAAAAACCTGCGGCTGTGTCCGAGGAGTTGAAATTGGCTGTGATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CCA 90 bp GATTTTTATCTGACAACAAGTGGATGCAGCGTTCCATCACGTCCATaGCTATTTGGATCTGCAATGGCAGTGGTGGCTCCACATCTGGAC +
Preference number: 5 (lower is better)
Translates to: DFYLTTSGCSVPSRP*LFGSAMAVVAPHLD
Trigger: GTCCAGATGTGGAGCCACCACTGCCATTGCAGATCCAAATAGCCATGGACGTGATGGAACGCTGCATCCACTTGTTGTCAGATAAAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CCA 90 bp CGTTCCTCAACAATCTTGATGTCAGCCACGTCTAGCTCTAGAACTTaGATGAGTGCTTTGGAAAGCCGAGCTTGTAGTCGTGTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: RSSTILMSATSSSRT*MSALESRACSRVCR
Trigger: TCTGCAGACACGACTACAAGCTCGGCTTTCCAAAGCACTCATCCAAGTTCTAGAGCTAGACGTGGCTGACATCAAGATTGTTGAGGAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487362.1
CDS CCA 90 bp TCTAGCTCTAGAACTTGGATGAGTGCTTTGGAAAGCCGCTGGAGATaGGCCACAGAGTTGAGGACAAAGTTTATTTTTGGGCCCAAGAGT +
Preference number: 5 (lower is better)
Translates to: SSSRTWMSALESRWR*ATELRTKFIFGPKS
Trigger: ACTCTTGGGCCCAAAAATAAACTTTGTCCTCAACTCTGTGGCCCATCTCCAGCGGCTTTCCAAAGCACTCATCCAAGTTCTAGAGCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAAGCAGCCTTCCCCTCATaGAGGAAACATCCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKAAFPS*RKHPAG
Trigger: GCCTGCAGGATGTTTCCTCAATGAGGGGAAGGCTGC...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS TCA 90 bp ATCCAGCACATCCAAGACCTTCAGGCGGATTTGCAGATTTTTATCTaGCAACAAGTGGATGCAGCGTTCCATCACGTCCATGGCTATTTG +
Preference number: 5 (lower is better)
Translates to: IQHIQDLQADLQIFI*QQVDAAFHHVHGYL
Trigger: CAAATAGCCATGGACGTGATGGAACGCTGCATCCACTTGTTGTCAGATAAAAATCTGCAAATCCGCCTGAAGGTCTTGGATGTGCTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS GCA 90 bp AGACCTTCAGGCGGATTTGCAGATTTTTATCTGACAACAAGTGGATaGAGCGTTCCATCACGTCCATGGCTATTTGGATCTGCAATGGCA +
Preference number: 5 (lower is better)
Translates to: RPSGGFADFYLTTSG*SVPSRPWLFGSAMA
Trigger: TGCCATTGCAGATCCAAATAGCCATGGACGTGATGGAACGCTGCATCCACTTGTTGTCAGATAAAAATCTGCAAATCCGCCTGAAGGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS GCA 90 bp AAACTGCCATTGTGCAGCAGCCTTCCCCTCATTGAGGAAACATCCTaGAGGCTGGAGGAAGGAAACTGTTCAGTAAAAATGTCAAGTTCA +
Preference number: 5 (lower is better)
Translates to: KLPLCSSLPLIEETS*RLEEGNCSVKMSSS
Trigger: TGAACTTGACATTTTTACTGAACAGTTTCCTTCCTCCAGCCTGCAGGATGTTTCCTCAATGAGGGGAAGGCTGCTGCACAATGGCAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449821.1
CDS TCA 90 bp GGAGAAGCTCCTGTTCTTTCACACATGTTGAAGAAAGGACAAATGTaGGGCATTCCACCACACTTTGGATCAAACGCTCTCTTTTGGGAC +
Preference number: 5 (lower is better)
Translates to: GEAPVLSHMLKKGQM*GIPPHFGSNALFWD
Trigger: GTCCCAAAAGAGAGCGTTTGATCCAAAGTGTGGTGGAATGCCTCACATTTGTCCTTTCTTCAACATGTGTGAAAGAACAGGAGCTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CCA 90 bp TCCAAGACCTTCAGGCGGATTTGCAGATTTTTATCTGACAACAAGTaGATGCAGCGTTCCATCACGTCCATGGCTATTTGGATCTGCAAT +
Preference number: 5 (lower is better)
Translates to: SKTFRRICRFLSDNK*MQRSITSMAIWICN
Trigger: ATTGCAGATCCAAATAGCCATGGACGTGATGGAACGCTGCATCCACTTGTTGTCAGATAAAAATCTGCAAATCCGCCTGAAGGTCTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAAATCAAACGCTCTCTTTaGGGACCTGGGGTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKIKRSL*GPGVFR
Trigger: CCTGAAGACCCCAGGTCCCAAAAGAGAGCGTTTGAT...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS TCA 90 bp TCTGACAAGATGTCAGCGAGGGCTTTGTTGCCCACCACTACTTTTTaGTCTGCAAAATGTCTCAGAACTTTATTGCACTGGGCTTGGATT +
Preference number: 5 (lower is better)
Translates to: SDKMSARALLPTTTF*SAKCLRTLLHWAWI
Trigger: AATCCAAGCCCAGTGCAATAAAGTTCTGAGACATTTTGCAGATCAAAAAGTAGTGGTGGGCAACAAAGCCCTCGCTGACATCTTGTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS TCA 90 bp GCAGATTTAAAGAGATCCCATTCACTAAATAGTCTGAATTTTGATTaGTCAGGTGCTGCAGGGAGTCGTAGCCACAAGCACGGCAAACGT +
Preference number: 5 (lower is better)
Translates to: ADLKRSHSLNSLNFD*SGAAGSRSHKHGKR
Trigger: ACGTTTGCCGTGCTTGTGGCTACGACTCCCTGCAGCACCTGATCAATCAAAATTCAGACTATTTAGTGAATGGGATCTCTTTAAATCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAAATGTCAGCGAGGGCTTaGTTGCCCACCACTACTTTT +
Preference number: 5 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKMSARA*LPTTTF
Trigger: AAAAGTAGTGGTGGGCAACAAAGCCCTCGCTGACAT...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAATCATTCTCATCCACTTaGGGAGGGACTGACTGTTCC +
Preference number: 5 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKSFSST*GGTDCS
Trigger: GGAACAGTCAGTCCCTCCCAAAGTGGATGAGAATGA...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS TCA 90 bp CCCAGCTGCTTTTGTTCAAGTTCATCCAATGACCTTGGATGGTCCTaGCAATCACACTGCAAGAGTAGAACCTGTAAACATTTTAAGGCA +
Preference number: 5 (lower is better)
Translates to: PSCFCSSSSNDLGWS*QSHCKSRTCKHFKA
Trigger: TGCCTTAAAATGTTTACAGGTTCTACTCTTGCAGTGTGATTGTCAGGACCATCCAAGGTCATTGGATGAACTTGAACAAAAGCAGCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS TCA 90 bp CATTATCAAAATCCGAGACATTTCCATCTGCCACATCCTTCTCTTTaGGGTAGTTCAGCAAAAACTGTTCGATGTCTTCAGCTGTGGTGG +
Preference number: 5 (lower is better)
Translates to: HYQNPRHFHLPHPSL*GSSAKTVRCLQLWW
Trigger: CCACCACAGCTGAAGACATCGAACAGTTTTTGCTGAACTACCTCAAAGAGAAGGATGTGGCAGATGGAAATGTCTCGGATTTTGATAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CCA 90 bp GAGCTGGGTGAATACAGACAAGCAGAGAGTTCTGAAAAGAGTTCCTaGAGAAGCTCCTGTTCTTTCACACATGTTGAAGAAAGGACAAAT +
Preference number: 5 (lower is better)
Translates to: ELGEYRQAESSEKSS*RSSCSFTHVEERTN
Trigger: ATTTGTCCTTTCTTCAACATGTGTGAAAGAACAGGAGCTTCTCCAGGAACTCTTTTCAGAACTCTCTGCTTGTCTGTATTCACCCAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAAGTTCATCCAATGACCTaGGATGGTCCTGACAATCAC +
Preference number: 5 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKVHPMT*DGPDNH
Trigger: GTGATTGTCAGGACCATCCAAGGTCATTGGATGAAC...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAATCTCTTATCGTAAAATaGGTCCAGGGTGGCCAAGAC +
Preference number: 5 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKSLIVK*VQGGQD
Trigger: GTCTTGGCCACCCTGGACCAATTTTACGATAAGAGA...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAAAGAAAGTCACCACACTaGCTTCCCAGGGTACGTAAA +
Preference number: 5 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKRKSPH*LPRVRK
Trigger: TTTACGTACCCTGGGAAGCAAGTGTGGTGACTTTCT...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAAGCATTCCACCACACTTaGGATCAAACGCTCTCTTTT +
Preference number: 5 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKAFHHT*DQTLSF
Trigger: AAAAGAGAGCGTTTGATCCAAAGTGTGGTGGAATGC...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTATGTCAGCGAGGGCTTaGTTGCCCACCACTACTTTT +
Preference number: 5 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFMSARA*LPTTTF
Trigger: AAAAGTAGTGGTGGGCAACAAAGCCCTCGCTGACAT...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTGTGTGGCTGAGGTCTTaGGAGAAGCATTCAGATCAT +
Preference number: 5 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFVWLRS*EKHSDH
Trigger: ATGATCTGAATGCTTCTCCAAAGACCTCAGCCACAC...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTAGAAAGTCACCACACTaGCTTCCCAGGGTACGTAAA +
Preference number: 5 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFRKSPH*LPRVRK
Trigger: TTTACGTACCCTGGGAAGCAAGTGTGGTGACTTTCT...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAAGTTCCATCTCATTATTaGAAGACAGGGAGGTGTATG +
Preference number: 5 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKVPSHY*KTGRCM
Trigger: CATACACCTCCCTGTCTTCAAATAATGAGATGGAAC...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS TCA 90 bp AAGTCTTTTCCTAGTGCATATGCAAACTGGCCAATTCCTTCCAACTaGATGCATATTTGCCAGATGTTACTGTTCATGGAGCAAATAGTG +
Preference number: 5 (lower is better)
Translates to: KSFPSAYANWPIPSN*MHICQMLLFMEQIV
Trigger: CACTATTTGCTCCATGAACAGTAACATCTGGCAAATATGCATTCAGTTGGAAGGAATTGGCCAGTTTGCATATGCACTAGGAAAAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
ENST00000487362.1
CDS-3UTR CAA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTGCATTCCACCACACTTaGGATCAAACGCTCTCTTTT +
Preference number: 5 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFAFHHT*DQTLSF
Trigger: AAAAGAGAGCGTTTGATCCAAAGTGTGGTGGAATGC...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp AGTCAGCTACTTTCCTTCAATCCATTTCTAAGCAGTTGTGTGATCGATCAATTTTTTATTGCACTGGGCTaGGATTTCAGGACTCTCATC +
Preference number: 5 (lower is better)
Translates to: SQLLSFNPFLSSCVIDQFFIALG*DFRTLI
Trigger: GATGAGAGTCCTGAAATCCAAGCCCAGTGCAATAAA...AAATTGATCGATCACACAACTGCTTAGAAATGGATTGAAGGAAAGTAGCTGACT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS-3UTR CAA 90 bp ACCCTTAGAGCCACCAGACAATGTCACTTGACAACACAAGGTATGAAACATAAAAGATGGGCCACAGAGTaGAGGACAAAGTTTATTTTT +
Preference number: 5 (lower is better)
Translates to: TLRATRQCHLTTQGMKHKRWATE*RTKFIF
Trigger: AAAAATAAACTTTGTCCTCAACTCTGTGGCCCATCT...TTTATGTTTCATACCTTGTGTTGTCAAGTGACATTGTCTGGTGGCTCTAAGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS TCA 72 bp GGGGGCCCAGGCCCTGTAAGACAGCCAGCTGCAACTTaGAGGCCAGCGTGTGCGAGTAAACTGGTCCAGCCC +
Preference number: 6 (lower is better)
Translates to: GGPGPVRQPAAT*RPACASKLVQP
Trigger: GGGCTGGACCAGTTTACTCGCACACGCTGGCCTTCAAGTTGCAGCTGGCTGTCTTACAGGGCCTGGGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
ENST00000473288.1
CDS CCA 72 bp CAGCTGCAACTTGAAGGCCAGCGTGTGCGAGTAAACTaGTCCAGCCCTGGCACTGATGGGGGCCTGGGTGAC +
Preference number: 6 (lower is better)
Translates to: QLQLEGQRVRVN*SSPGTDGGLGD
Trigger: GTCACCCAGGCCCCCATCAGTGCCAGGGCTGGACCAGTTTACTCGCACACGCTGGCCTTCAAGTTGCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
ENST00000473288.1
CDS CCA 72 bp GCAGGTGTGTTCACCAGACGTGATGGCTTGGAGGCCTaGGTGCTCCATCATCAGCTCCTCTCCCATTTCCTC +
Preference number: 6 (lower is better)
Translates to: AGVFTRRDGLEA*VLHHQLLSHFL
Trigger: GAGGAAATGGGAGAGGAGCTGATGATGGAGCACCCAGGCCTCCAAGCCATCACGTCTGGTGAACACACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
ENST00000487362.1
CDS CCA 72 bp GCACGGGGCAGTAAAGCTCGTTCAGGAGGAACCAGGTaGAGTCTGGGTCCACCTTCATCAAGTGGAGGAAGA +
Preference number: 6 (lower is better)
Translates to: ARGSKARSGGTR*SLGPPSSSGGR
Trigger: TCTTCCTCCACTTGATGAAGGTGGACCCAGACTCCACCTGGTTCCTCCTGAACGAGCTTTACTGCCCCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS TCA 72 bp GCACGGCAAACGTCCATCATGGTGCTGGTAGCCACCTaGCTAATGAGTAGGGTTTGGTCTCCAGCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: ARQTSIMVLVAT*LMSRVWSPAFS
Trigger: GGAGAAGGCTGGAGACCAAACCCTACTCATTAGTCAGGTGGCTACCAGCACCATGATGGACGTTTGCCGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS GCA 72 bp ATGCAGCGTTCCATCACGTCCATGGCTATTTGGATCTaGAATGGCAGTGGTGGCTCCACATCTGGACGGGTG +
Preference number: 6 (lower is better)
Translates to: MQRSITSMAIWI*NGSGGSTSGRV
Trigger: CACCCGTCCAGATGTGGAGCCACCACTGCCATTGCAGATCCAAATAGCCATGGACGTGATGGAACGCTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS GCA 72 bp CAGCCAGCTTTGGCAGGACATCTTTGCAGAACCGGCTaGGAAGAAAGTCACCACACTTGCTTCCCAGGGTAC +
Preference number: 6 (lower is better)
Translates to: QPALAGHLCRTG*EESHHTCFPGY
Trigger: GTACCCTGGGAAGCAAGTGTGGTGACTTTCTTCGCAGCCGGTTCTGCAAAGATGTCCTGCCAAAGCTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
ENST00000473288.1
CDS CCA 72 bp GCAGTAAAGCTCGTTCAGGAGGAACCAGGTGGAGTCTaGGTCCACCTTCATCAAGTGGAGGAAGACGCTCCT +
Preference number: 6 (lower is better)
Translates to: AVKLVQEEPGGV*VHLHQVEEDAP
Trigger: AGGAGCGTCTTCCTCCACTTGATGAAGGTGGACCCAGACTCCACCTGGTTCCTCCTGAACGAGCTTTACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CAA 72 bp GTGACTAGGGAGCCAGCCAGCTTTGGCAGGACATCTTaGCAGAACCGGCTGCGAAGAAAGTCACCACACTTG +
Preference number: 6 (lower is better)
Translates to: VTREPASFGRTS*QNRLRRKSPHL
Trigger: CAAGTGTGGTGACTTTCTTCGCAGCCGGTTCTGCAAAGATGTCCTGCCAAAGCTGGCTGGCTCCCTAGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
ENST00000473288.1
CDS GCA 72 bp TTGTGCAGCAGCCTTCCCCTCATTGAGGAAACATCCTaGAGGCTAGGTGTGGTGGTGTGCACTAATAGTCCC +
Preference number: 6 (lower is better)
Translates to: LCSSLPLIEETS*RLGVVVCTNSP
Trigger: GGGACTATTAGTGCACACCACCACACCTAGCCTGCAGGATGTTTCCTCAATGAGGGGAAGGCTGCTGCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373448.6
CDS CCA 72 bp GCGTTCCATCACGTCCATGGCTATTTGGATCTGCAATaGCAGTGGTGGCTCCACATCTGGACGGGTGTCATT +
Preference number: 6 (lower is better)
Translates to: AFHHVHGYLDLQ*QWWLHIWTGVI
Trigger: AATGACACCCGTCCAGATGTGGAGCCACCACTGCCATTGCAGATCCAAATAGCCATGGACGTGATGGAACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CAA 72 bp TCAGCCACGTCTAGCTCTAGAACTTGGATGAGTGCTTaGGAAAGCCGCTGGAGATGGGCCACAGAGTTGAGG +
Preference number: 6 (lower is better)
Translates to: SATSSSRTWMSA*ESRWRWATELR
Trigger: CCTCAACTCTGTGGCCCATCTCCAGCGGCTTTCCAAAGCACTCATCCAAGTTCTAGAGCTAGACGTGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CAA 72 bp CAAGTGGATGCAGCGTTCCATCACGTCCATGGCTATTaGGATCTGCAATGGCAGTGGTGGCTCCACATCTGG +
Preference number: 6 (lower is better)
Translates to: QVDAAFHHVHGY*DLQWQWWLHIW
Trigger: CCAGATGTGGAGCCACCACTGCCATTGCAGATCCAAATAGCCATGGACGTGATGGAACGCTGCATCCACTTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CAA 90 bp GGCAGGACATCTTTGCAGAACCGGCTGCGAAGAAAGTCACCACACTaGCTTCCCAGGGTACGTAAAACCTTGAAGGCTCTAAGCACTGCC +
Preference number: 6 (lower is better)
Translates to: GRTSLQNRLRRKSPH*LPRVRKTLKALSTA
Trigger: GGCAGTGCTTAGAGCCTTCAAGGTTTTACGTACCCTGGGAAGCAAGTGTGGTGACTTTCTTCGCAGCCGGTTCTGCAAAGATGTCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
ENST00000473288.1
CDS TCA 72 bp TGCTCCACATTCTCCACTGTCTGGGTCTTTGTGAGCTaGACACAGACTGGACGTAAGACACCAAAGGCCTCC +
Preference number: 6 (lower is better)
Translates to: CSTFSTVWVFVS*TQTGRKTPKAS
Trigger: GGAGGCCTTTGGTGTCTTACGTCCAGTCTGTGTTCAGCTCACAAAGACCCAGACAGTGGAGAATGTGGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
ENST00000487362.1
CDS GCA 72 bp GCACTGTCACTCACAGCTTGTAGTCGTGTCTGCAGATaGTCCACATTCTCCACTGTCTGGGTCTTTGTGAGC +
Preference number: 6 (lower is better)
Translates to: ALSLTACSRVCR*STFSTVWVFVS
Trigger: GCTCACAAAGACCCAGACAGTGGAGAATGTGGAGCATCTGCAGACACGACTACAAGCTGTGAGTGACAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS GCA 72 bp GCTTTGGAAAGCCGAGCTTGTAGTCGTGTCTGCAGATaGTCCACATTCTCCACTGTCTGGGTCTTTGTGAGC +
Preference number: 6 (lower is better)
Translates to: ALESRACSRVCR*STFSTVWVFVS
Trigger: GCTCACAAAGACCCAGACAGTGGAGAATGTGGAGCATCTGCAGACACGACTACAAGCTCGGCTTTCCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487362.1
CDS CCA 72 bp TATTTGGATCTGCAATGGCAGTGGTGGCTCCACATCTaGACGGGTGTCATTCTCATCCACTTTGGGAGGGAC +
Preference number: 6 (lower is better)
Translates to: YLDLQWQWWLHI*TGVILIHFGRD
Trigger: GTCCCTCCCAAAGTGGATGAGAATGACACCCGTCCAGATGTGGAGCCACCACTGCCATTGCAGATCCAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CCA 72 bp CATCACGTCCATGGCTATTTGGATCTGCAATGGCAGTaGTGGCTCCACATCTGGACGGGTGTCATTCTCATC +
Preference number: 6 (lower is better)
Translates to: HHVHGYLDLQWQ*WLHIWTGVILI
Trigger: GATGAGAATGACACCCGTCCAGATGTGGAGCCACCACTGCCATTGCAGATCCAAATAGCCATGGACGTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CCA 72 bp AAGTGGATGCAGCGTTCCATCACGTCCATGGCTATTTaGATCTGCAATGGCAGTGGTGGCTCCACATCTGGA +
Preference number: 6 (lower is better)
Translates to: KWMQRSITSMAI*ICNGSGGSTSG
Trigger: TCCAGATGTGGAGCCACCACTGCCATTGCAGATCCAAATAGCCATGGACGTGATGGAACGCTGCATCCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CCA 72 bp CTGACAACAAGTGGATGCAGCGTTCCATCACGTCCATaGCTATTTGGATCTGCAATGGCAGTGGTGGCTCCA +
Preference number: 6 (lower is better)
Translates to: LTTSGCSVPSRP*LFGSAMAVVAP
Trigger: TGGAGCCACCACTGCCATTGCAGATCCAAATAGCCATGGACGTGATGGAACGCTGCATCCACTTGTTGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CAA 72 bp AGGCATTCCACCACACTTTGGATCAAACGCTCTCTTTaGGGACCTGGGGTCTTCAGGGTAAATCGCAGAGGG +
Preference number: 6 (lower is better)
Translates to: RHSTTLWIKRSL*GPGVFRVNRRG
Trigger: CCCTCTGCGATTTACCCTGAAGACCCCAGGTCCCAAAAGAGAGCGTTTGATCCAAAGTGTGGTGGAATGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CAA 72 bp TCTGGATGCGGTTCCAAGGCTGTGTGGCTGAGGTCTTaGGAGAAGCATTCAGATCATCAGAGTTCCAACGCC +
Preference number: 6 (lower is better)
Translates to: SGCGSKAVWLRS*EKHSDHQSSNA
Trigger: GGCGTTGGAACTCTGATGATCTGAATGCTTCTCCAAAGACCTCAGCCACACAGCCTTGGAACCGCATCCAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
ENST00000487362.1
CDS CAA 90 bp GACGTAAGACACCAAAGGCCTCCTCAGGAGTATCAAAAACTGCCATaGTGCAGCAGCCTTCCCCTCATTGAGGAAACATCCTGCAGGCTC +
Preference number: 6 (lower is better)
Translates to: DVRHQRPPQEYQKLP*CSSLPLIEETSCRL
Trigger: GAGCCTGCAGGATGTTTCCTCAATGAGGGGAAGGCTGCTGCACAATGGCAGTTTTTGATACTCCTGAGGAGGCCTTTGGTGTCTTACGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373447.8
CDS CAA 90 bp GACGTAAGACACCAAAGGCCTCCTCAGGAGTATCAAAAACTGCCATaGTGCAGCAGCCTTCCCCTCATTGAGGAAACATCCTGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: DVRHQRPPQEYQKLP*CSSLPLIEETSCRL
Trigger: CAGCCTGCAGGATGTTTCCTCAATGAGGGGAAGGCTGCTGCACAATGGCAGTTTTTGATACTCCTGAGGAGGCCTTTGGTGTCTTACGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449821.1
CDS CAA 90 bp GACGTAAGACACCAAAGGCCTCCTCAGGAGTATCAAAAACTGCCATaGTGCAGCAGCCTTCCCCTCATTGAGGAAACATCCTGCAGGCTA +
Preference number: 6 (lower is better)
Translates to: DVRHQRPPQEYQKLP*CSSLPLIEETSCRL
Trigger: TAGCCTGCAGGATGTTTCCTCAATGAGGGGAAGGCTGCTGCACAATGGCAGTTTTTGATACTCCTGAGGAGGCCTTTGGTGTCTTACGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373448.6
CDS CAA 90 bp GGCAGTGGTGGCTCCACATCTGGACGGGTGTCATTCTCATCCACTTaGGGAGGGACTGACTGTTCCTCTTCTTCATTATCAAAATCCGAG +
Preference number: 6 (lower is better)
Translates to: GSGGSTSGRVSFSST*GGTDCSSSSLSKSE
Trigger: CTCGGATTTTGATAATGAAGAAGAGGAACAGTCAGTCCCTCCCAAAGTGGATGAGAATGACACCCGTCCAGATGTGGAGCCACCACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS GCA 72 bp GAGTTCATTAGGCGAGGAAGAGATGTGGCAAGGGAATaGAGGCTTTCTGACAAGATGTCAGCGAGGGCTTTG +
Preference number: 6 (lower is better)
Translates to: EFIRRGRDVARE*RLSDKMSARAL
Trigger: CAAAGCCCTCGCTGACATCTTGTCAGAAAGCCTGCATTCCCTTGCCACATCTCTTCCTCGCCTAATGAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CCA 72 bp CACCACACTTTGGATCAAACGCTCTCTTTTGGGACCTaGGGTCTTCAGGGTAAATCGCAGAGGGAAGAGGAT +
Preference number: 6 (lower is better)
Translates to: HHTLDQTLSFGT*GLQGKSQREED
Trigger: ATCCTCTTCCCTCTGCGATTTACCCTGAAGACCCCAGGTCCCAAAAGAGAGCGTTTGATCCAAAGTGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CCA 72 bp GCCAATTTCAACTCCTCGGACACAGCCGCAGGTTTTTaGGAGCTGGGTGAATACAGACAAGCAGAGAGTTCT +
Preference number: 6 (lower is better)
Translates to: ANFNSSDTAAGF*ELGEYRQAESS
Trigger: AGAACTCTCTGCTTGTCTGTATTCACCCAGCTCCCAAAAACCTGCGGCTGTGTCCGAGGAGTTGAAATTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CCA 72 bp ACAATCTTGATGTCAGCCACGTCTAGCTCTAGAACTTaGATGAGTGCTTTGGAAAGCCGCTGGAGATGGGCC +
Preference number: 6 (lower is better)
Translates to: TILMSATSSSRT*MSALESRWRWA
Trigger: GGCCCATCTCCAGCGGCTTTCCAAAGCACTCATCCAAGTTCTAGAGCTAGACGTGGCTGACATCAAGATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CAA 90 bp ACAAATGTGAGGCATTCCACCACACTTTGGATCAAACGCTCTCTTTaGGGACCTGGGGTCTTCAGGGTAAATCGCAGAGGGAAGAGGATG +
Preference number: 6 (lower is better)
Translates to: TNVRHSTTLWIKRSL*GPGVFRVNRRGKRM
Trigger: CATCCTCTTCCCTCTGCGATTTACCCTGAAGACCCCAGGTCCCAAAAGAGAGCGTTTGATCCAAAGTGTGGTGGAATGCCTCACATTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CAA 90 bp AATATCTCCTCTGGATGCGGTTCCAAGGCTGTGTGGCTGAGGTCTTaGGAGAAGCATTCAGATCATCAGAGTTCCAACGCCGTTCCTCAA +
Preference number: 6 (lower is better)
Translates to: NISSGCGSKAVWLRS*EKHSDHQSSNAVPQ
Trigger: TTGAGGAACGGCGTTGGAACTCTGATGATCTGAATGCTTCTCCAAAGACCTCAGCCACACAGCCTTGGAACCGCATCCAGAGGAGATATT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
ENST00000487362.1
CDS GCA 72 bp ATGAGTGCTTTGGAAAGCCGAGCTTGTAGTCGTGTCTaGAGATGCTCCACATTCTCCACTGTCTGGGTCTTT +
Preference number: 6 (lower is better)
Translates to: MSALESRACSRV*RCSTFSTVWVF
Trigger: AAAGACCCAGACAGTGGAGAATGTGGAGCATCTGCAGACACGACTACAAGCTCGGCTTTCCAAAGCACTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487362.1
CDS CCA 72 bp GGTCATCTTGGGAGTTCATTAGGCGAGGAAGAGATGTaGCAAGGGAATGCAGGCTTTCTGACAAGATGTCAG +
Preference number: 6 (lower is better)
Translates to: GHLGSSLGEEEM*QGNAGFLTRCQ
Trigger: CTGACATCTTGTCAGAAAGCCTGCATTCCCTTGCCACATCTCTTCCTCGCCTAATGAACTCCCAAGATGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CAA 72 bp TCTTTGCAGAACCGGCTGCGAAGAAAGTCACCACACTaGCTTCCCAGGGTACGTAAAACCTTGAAGGCTCTA +
Preference number: 6 (lower is better)
Translates to: SLQNRLRRKSPH*LPRVRKTLKAL
Trigger: TAGAGCCTTCAAGGTTTTACGTACCCTGGGAAGCAAGTGTGGTGACTTTCTTCGCAGCCGGTTCTGCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
ENST00000473288.1
CDS CAA 90 bp ATCTTGATGTCAGCCACGTCTAGCTCTAGAACTTGGATGAGTGCTTaGGAAAGCCGCTGGAGATGGGCCACAGAGTTGAGGACAAAGTTT +
Preference number: 6 (lower is better)
Translates to: ILMSATSSSRTWMSA*ESRWRWATELRTKF
Trigger: AAACTTTGTCCTCAACTCTGTGGCCCATCTCCAGCGGCTTTCCAAAGCACTCATCCAAGTTCTAGAGCTAGACGTGGCTGACATCAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS TCA 72 bp GCCTTCAGAAGGGGACCAGCACATTCGACCAATGATTaGCTGCACTTCAAAAGAAGGTCCTCCACAAGTTCT +
Preference number: 6 (lower is better)
Translates to: AFRRGPAHSTND*LHFKRRSSTSS
Trigger: AGAACTTGTGGAGGACCTTCTTTTGAAGTGCAGTCAATCATTGGTCGAATGTGCTGGTCCCCTTCTGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS GCA 72 bp TTGTGCAGCAGCCTTCCCCTCATTGAGGAAACATCCTaGAGGCTGGAGGAAGGAAACTGTTCAGTAAAAATG +
Preference number: 6 (lower is better)
Translates to: LCSSLPLIEETS*RLEEGNCSVKM
Trigger: CATTTTTACTGAACAGTTTCCTTCCTCCAGCCTGCAGGATGTTTCCTCAATGAGGGGAAGGCTGCTGCACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449821.1
CDS CCA 72 bp ATTCTCTCATCAGTGAAGAAGCGGAAATATCTCCTCTaGATGCGGTTCCAAGGCTGTGTGGCTGAGGTCTTT +
Preference number: 6 (lower is better)
Translates to: ILSSVKKRKYLL*MRFQGCVAEVF
Trigger: AAAGACCTCAGCCACACAGCCTTGGAACCGCATCCAGAGGAGATATTTCCGCTTCTTCACTGATGAGAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
ENST00000487362.1
CDS CCA 72 bp AGGAAGCAGCTCTCTTATCGTAAAATTGGTCCAGGGTaGCCAAGACATCTTGAACCACATCTGCCACCAAAG +
Preference number: 6 (lower is better)
Translates to: RKQLSYRKIGPG*PRHLEPHLPPK
Trigger: CTTTGGTGGCAGATGTGGTTCAAGATGTCTTGGCCACCCTGGACCAATTTTACGATAAGAGAGCTGCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CCA 72 bp GGTAGTTCAGCAAAAACTGTTCGATGTCTTCAGCTGTaGTGGTGCTCTTCTCAAGAGCTGCTGGTCTTTGGT +
Preference number: 6 (lower is better)
Translates to: GSSAKTVRCLQL*WCSSQELLVFG
Trigger: ACCAAAGACCAGCAGCTCTTGAGAAGAGCACCACCACAGCTGAAGACATCGAACAGTTTTTGCTGAACTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CCA 72 bp GCTCCACATCTGGACGGGTGTCATTCTCATCCACTTTaGGAGGGACTGACTGTTCCTCTTCTTCATTATCAA +
Preference number: 6 (lower is better)
Translates to: APHLDGCHSHPL*EGLTVPLLHYQ
Trigger: TTGATAATGAAGAAGAGGAACAGTCAGTCCCTCCCAAAGTGGATGAGAATGACACCCGTCCAGATGTGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CAA 72 bp AGTGCTTTGGAAAGCCGCTGGAGATGGGCCACAGAGTaGAGGACAAAGTTTATTTTTGGGCCCAAGAGTTTC +
Preference number: 6 (lower is better)
Translates to: SALESRWRWATE*RTKFIFGPKSF
Trigger: GAAACTCTTGGGCCCAAAAATAAACTTTGTCCTCAACTCTGTGGCCCATCTCCAGCGGCTTTCCAAAGCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CAA 90 bp GAAGCATTCAGATCATCAGAGTTCCAACGCCGTTCCTCAACAATCTaGATGTCAGCCACGTCTAGCTCTAGAACTTGGATGAGTGCTTTG +
Preference number: 6 (lower is better)
Translates to: EAFRSSEFQRRSSTI*MSATSSSRTWMSAL
Trigger: CAAAGCACTCATCCAAGTTCTAGAGCTAGACGTGGCTGACATCAAGATTGTTGAGGAACGGCGTTGGAACTCTGATGATCTGAATGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
ENST00000487362.1
CDS TCA 72 bp CAAATCCCCCAGCTGCTTTTGTTCAAGTTCATCCAATaGCCTTGGATGGTCCTGACAATCACACTGCAAGAG +
Preference number: 6 (lower is better)
Translates to: QIPQLLLFKFIQ*PWMVLTITLQE
Trigger: CTCTTGCAGTGTGATTGTCAGGACCATCCAAGGTCATTGGATGAACTTGAACAAAAGCAGCTGGGGGATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS TCA 72 bp ACTGGGCTAATGCTGCCATCAGAGCATGCAGAACGCTaGCAAAGGAAGCAGCTCTCTTATCGTAAAATTGGT +
Preference number: 6 (lower is better)
Translates to: TGLMLPSEHAER*QRKQLSYRKIG
Trigger: ACCAATTTTACGATAAGAGAGCTGCTTCCTTTGTCAGCGTTCTGCATGCTCTGATGGCAGCATTAGCCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS TCA 72 bp GTGCTCTTCTCAAGAGCTGCTGGTCTTTGGTTCAAATaGCTTCCCTCTTCTCCTAAACTTTGCTCTTGGAGG +
Preference number: 6 (lower is better)
Translates to: VLFSRAAGLWFK*LPSSPKLCSWR
Trigger: CCTCCAAGAGCAAAGTTTAGGAGAAGAGGGAAGTCATTTGAACCAAAGACCAGCAGCTCTTGAGAAGAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS GCA 72 bp TCAGAAGGGGACCAGCACATTCGACCAATGATTGACTaGACTTCAAAAGAAGGTCCTCCACAAGTTCTACCA +
Preference number: 6 (lower is better)
Translates to: SEGDQHIRPMID*TSKEGPPQVLP
Trigger: TGGTAGAACTTGTGGAGGACCTTCTTTTGAAGTGCAGTCAATCATTGGTCGAATGTGCTGGTCCCCTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS GCA 72 bp GCAGGCTTTCTGACAAGATGTCAGCGAGGGCTTTGTTaGCCACCACTACTTTTTGATCTGCAAAATGTCTCA +
Preference number: 6 (lower is better)
Translates to: AGFLTRCQRGLC*PPLLFDLQNVS
Trigger: TGAGACATTTTGCAGATCAAAAAGTAGTGGTGGGCAACAAAGCCCTCGCTGACATCTTGTCAGAAAGCCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CCA 72 bp AGAACTTGGATGAGTGCTTTGGAAAGCCGCTGGAGATaGGCCACAGAGTTGAGGACAAAGTTTATTTTTGGG +
Preference number: 6 (lower is better)
Translates to: RTWMSALESRWR*ATELRTKFIFG
Trigger: CCCAAAAATAAACTTTGTCCTCAACTCTGTGGCCCATCTCCAGCGGCTTTCCAAAGCACTCATCCAAGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CCA 72 bp AGCTCTAGAACTTGGATGAGTGCTTTGGAAAGCCGCTaGAGATGGGCCACAGAGTTGAGGACAAAGTTTATT +
Preference number: 6 (lower is better)
Translates to: SSRTWMSALESR*RWATELRTKFI
Trigger: AATAAACTTTGTCCTCAACTCTGTGGCCCATCTCCAGCGGCTTTCCAAAGCACTCATCCAAGTTCTAGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CCA 72 bp AGTTCAGCAAAAACTGTTCGATGTCTTCAGCTGTGGTaGTGCTCTTCTCAAGAGCTGCTGGTCTTTGGTTCA +
Preference number: 6 (lower is better)
Translates to: SSAKTVRCLQLW*CSSQELLVFGS
Trigger: TGAACCAAAGACCAGCAGCTCTTGAGAAGAGCACCACCACAGCTGAAGACATCGAACAGTTTTTGCTGAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CCA 72 bp ACAATCTTGATGTCAGCCACGTCTAGCTCTAGAACTTaGATGAGTGCTTTGGAAAGCCGAGCTTGTAGTCGT +
Preference number: 6 (lower is better)
Translates to: TILMSATSSSRT*MSALESRACSR
Trigger: ACGACTACAAGCTCGGCTTTCCAAAGCACTCATCCAAGTTCTAGAGCTAGACGTGGCTGACATCAAGATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487362.1
CDS CAA 72 bp CCCCCAGCTGCTTTTGTTCAAGTTCATCCAATGACCTaGGATGGTCCTGACAATCACACTGCAAGAGTAGAA +
Preference number: 6 (lower is better)
Translates to: PPAAFVQVHPMT*DGPDNHTARVE
Trigger: TTCTACTCTTGCAGTGTGATTGTCAGGACCATCCAAGGTCATTGGATGAACTTGAACAAAAGCAGCTGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CAA 72 bp AGATCATCAGAGTTCCAACGCCGTTCCTCAACAATCTaGATGTCAGCCACGTCTAGCTCTAGAACTTGGATG +
Preference number: 6 (lower is better)
Translates to: RSSEFQRRSSTI*MSATSSSRTWM
Trigger: CATCCAAGTTCTAGAGCTAGACGTGGCTGACATCAAGATTGTTGAGGAACGGCGTTGGAACTCTGATGATCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
ENST00000487362.1
CDS TCA 72 bp ATCCAAGACCTTCAGGCGGATTTGCAGATTTTTATCTaGCAACAAGTGGATGCAGCGTTCCATCACGTCCAT +
Preference number: 6 (lower is better)
Translates to: IQDLQADLQIFI*QQVDAAFHHVH
Trigger: ATGGACGTGATGGAACGCTGCATCCACTTGTTGTCAGATAAAAATCTGCAAATCCGCCTGAAGGTCTTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS GCA 72 bp GGCGGATTTGCAGATTTTTATCTGACAACAAGTGGATaGAGCGTTCCATCACGTCCATGGCTATTTGGATCT +
Preference number: 6 (lower is better)
Translates to: GGFADFYLTTSG*SVPSRPWLFGS
Trigger: AGATCCAAATAGCCATGGACGTGATGGAACGCTGCATCCACTTGTTGTCAGATAAAAATCTGCAAATCCGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CCA 72 bp TTCAGGCGGATTTGCAGATTTTTATCTGACAACAAGTaGATGCAGCGTTCCATCACGTCCATGGCTATTTGG +
Preference number: 6 (lower is better)
Translates to: FRRICRFLSDNK*MQRSITSMAIW
Trigger: CCAAATAGCCATGGACGTGATGGAACGCTGCATCCACTTGTTGTCAGATAAAAATCTGCAAATCCGCCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CAA 90 bp CAAACAAATCCCCCAGCTGCTTTTGTTCAAGTTCATCCAATGACCTaGGATGGTCCTGACAATCACACTGCAAGAGTAGAACCTGTAAAC +
Preference number: 6 (lower is better)
Translates to: QTNPPAAFVQVHPMT*DGPDNHTARVEPVN
Trigger: GTTTACAGGTTCTACTCTTGCAGTGTGATTGTCAGGACCATCCAAGGTCATTGGATGAACTTGAACAAAAGCAGCTGGGGGATTTGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS TCA 72 bp CCTGTTCTTTCACACATGTTGAAGAAAGGACAAATGTaGGGCATTCCACCACACTTTGGATCAAACGCTCTC +
Preference number: 6 (lower is better)
Translates to: PVLSHMLKKGQM*GIPPHFGSNAL
Trigger: GAGAGCGTTTGATCCAAAGTGTGGTGGAATGCCTCACATTTGTCCTTTCTTCAACATGTGTGAAAGAACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS TCA 72 bp CCTAGTGCATATGCAAACTGGCCAATTCCTTCCAACTaGATGCATATTTGCCAGATGTTACTGTTCATGGAG +
Preference number: 6 (lower is better)
Translates to: PSAYANWPIPSN*MHICQMLLFME
Trigger: CTCCATGAACAGTAACATCTGGCAAATATGCATTCAGTTGGAAGGAATTGGCCAGTTTGCATATGCACTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
ENST00000487362.1
CDS TCA 72 bp AATCCGAGACATTTCCATCTGCCACATCCTTCTCTTTaGGGTAGTTCAGCAAAAACTGTTCGATGTCTTCAG +
Preference number: 6 (lower is better)
Translates to: NPRHFHLPHPSL*GSSAKTVRCLQ
Trigger: CTGAAGACATCGAACAGTTTTTGCTGAACTACCTCAAAGAGAAGGATGTGGCAGATGGAAATGTCTCGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CAA 72 bp AAGGATCATGGCAGCTTGCTTCCGGTAAACCACAGATaGATGGTAAAGTTCCATAAAGTGATCCACAAGCAA +
Preference number: 6 (lower is better)
Translates to: KDHGSLLPVNHR*MVKFHKVIHKQ
Trigger: TTGCTTGTGGATCACTTTATGGAACTTTACCATCAATCTGTGGTTTACCGGAAGCAAGCTGCCATGATCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS GCA 72 bp GTGCATATGCAAACTGGCCAATTCCTTCCAACTGAATaGATATTTGCCAGATGTTACTGTTCATGGAGCAAA +
Preference number: 6 (lower is better)
Translates to: VHMQTGQFLPTE*IFARCYCSWSK
Trigger: TTTGCTCCATGAACAGTAACATCTGGCAAATATGCATTCAGTTGGAAGGAATTGGCCAGTTTGCATATGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
ENST00000487362.1
CDS CCA 72 bp TCTGCAAAATGTCTCAGAACTTTATTGCACTGGGCTTaGATTTCAGGACTCTCATCATTTACTAGTCCCACT +
Preference number: 6 (lower is better)
Translates to: SAKCLRTLLHWA*ISGLSSFTSPT
Trigger: AGTGGGACTAGTAAATGATGAGAGTCCTGAAATCCAAGCCCAGTGCAATAAAGTTCTGAGACATTTTGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS TCA 72 bp TTTTGTTCAAGTTCATCCAATGACCTTGGATGGTCCTaGCAATCACACTGCAAGAGTAGAACCTGTAAACAT +
Preference number: 6 (lower is better)
Translates to: FCSSSSNDLGWS*QSHCKSRTCKH
Trigger: ATGTTTACAGGTTCTACTCTTGCAGTGTGATTGTCAGGACCATCCAAGGTCATTGGATGAACTTGAACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1
CDS CAA 90 bp CAGTTCATTAAGGATCATGGCAGCTTGCTTCCGGTAAACCACAGATaGATGGTAAAGTTCCATAAAGTGATCCACAAGCAAATAAAGATT +
Preference number: 6 (lower is better)
Translates to: QFIKDHGSLLPVNHR*MVKFHKVIHKQIKI
Trigger: AATCTTTATTTGCTTGTGGATCACTTTATGGAACTTTACCATCAATCTGTGGTTTACCGGAAGCAAGCTGCCATGATCCTTAATGAACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373447.8
ENST00000373448.6
ENST00000449821.1