Pregenerated sensors for TTC9C (Homo sapiens)
Ensembl gene IDs: ENSG00000162222Ensembl transcript IDs: ENST00000294161.10, ENST00000316461.9, ENST00000530625.5, ENST00000532276.1, ENST00000532583.1
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTCCTGCAGATGGAAAAAGGCCACTCCGGCCCGATACAAGGCCTTaGCATTATCAGGCTGTCGTTCCAGGACTTTCTGACTATATTCTC | + |
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Preference number: 1 (lower is better) Translates to: SPADGKRPLRPDTRP*HYQAVVPGLSDYIL Trigger: GAGAATATAGTCAGAAAGTCCTGGAACGACAGCCTGATAATGCCAAGGCCTTGTATCGGGCCGGAGTGGCCTTTTTCCATCTGCAGGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| 3UTR-3UTR CCA 90 bp | CCCTTCTTGCTTACCTTTAGGCTGCCTATTCACGGCAGCCAGGAGGTAGTGGCGCCCGATACAAGGCCTTaGCATTATCAGGCTGTCGTT | + |
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Preference number: 2 (lower is better) Translates to: PFLLTFRLPIHGSQEVVAPDTRP*HYQAVV Trigger: AACGACAGCCTGATAATGCCAAGGCCTTGTATCGGG...CGCCACTACCTCCTGGCTGCCGTGAATAGGCAGCCTAAAGGTAAGCAAGAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| 3UTR CAA 90 bp | CCACCCCAGCAAGACAATTTTGTCTTTACCATTTCAAAGCCCTTCTaGCTTACCTTTAGGCTGCCTATTCACGGCAGCCAGGAGGTAGTG | + |
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Preference number: 2 (lower is better) Translates to: PPQQDNFVFTISKPF*LTFRLPIHGSQEVV Trigger: CACTACCTCCTGGCTGCCGTGAATAGGCAGCCTAAAGGTAAGCAAGAAGGGCTTTGAAATGGTAAAGACAAAATTGTCTTGCTGGGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| 3UTR-3UTR TCA 90 bp | TGGAGACAAGAACACAAGAGTGGAAAAAGGTCTGTTCATCGTATACTTTTTCAGTTCACGGGCTCCATCTaGAGGAGACAAGCTGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: WRQEHKSGKRSVHRILFQFTGSI*RRQAAE Trigger: CTCTGCAGCTTGTCTCCTTCAGATGGAGCCCGTGAA...CTGAAAAAGTATACGATGAACAGACCTTTTTCCACTCTTGTGTTCTTGTCTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| 3UTR-3UTR GCA 90 bp | CAAACCTGCATATCCTGCACATGGATCCTGGAACTGGGTCAGAGGTATAGGGTTCAGATTTCTCCTTCATaGATGTTTAATGGTCCACCT | + |
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Preference number: 2 (lower is better) Translates to: QTCISCTWILELGQRYRVQISPS*MFNGPP Trigger: AGGTGGACCATTAAACATGCATGAAGGAGAAATCTG...AACCCTATACCTCTGACCCAGTTCCAGGATCCATGTGCAGGATATGCAGGTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532276.1 |
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| 3UTR-3UTR GCA 90 bp | AAGACAATTTTGTCTTTACCATTTCAAAGCCCTTCTTGCTTACCTTTAGGCTGCCTGAAGGAGACAAGCTaGAGAGGAGTCAATTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: KTILSLPFQSPSCLPLGCLKETS*RGVNSG Trigger: GCCTGAATTGACTCCTCTGCAGCTTGTCTCCTTCAG...GCAGCCTAAAGGTAAGCAAGAAGGGCTTTGAAATGGTAAAGACAAAATTGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| 3UTR CCA 72 bp | GATGGAAAAAGGCCACTCCGGCCCGATACAAGGCCTTaGCATTATCAGGCTGTCGTTCCAGGACTTTCTGAC | + |
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Preference number: 3 (lower is better) Translates to: DGKRPLRPDTRP*HYQAVVPGLSD Trigger: GTCAGAAAGTCCTGGAACGACAGCCTGATAATGCCAAGGCCTTGTATCGGGCCGGAGTGGCCTTTTTCCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| 3UTR GCA 72 bp | AAGACAATTTTGTCTTTACCATTTCAAAGCCCTTCTTaGTTACCTTTAGGCTGCCTATTCACGGCAGCCAGG | + |
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Preference number: 3 (lower is better) Translates to: KTILSLPFQSPS*LPLGCLFTAAR Trigger: CCTGGCTGCCGTGAATAGGCAGCCTAAAGGTAAGCAAGAAGGGCTTTGAAATGGTAAAGACAAAATTGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| CDS-3UTR GCA 90 bp | GCCTATTCACGGCAGCCAGGAGGTAGTGGCGGGCCTGGTCATAGTCCTGCAGATCATAAGCGTCACAGCTaGAAGCCCACCCGGCGCCGT | + |
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Preference number: 4 (lower is better) Translates to: AYSRQPGGSGGPGHSPADHKRHS*KPTRRR Trigger: ACGGCGCCGGGTGGGCTTGCAGCTGTGACGCTTATG...ATCTGCAGGACTATGACCAGGCCCGCCACTACCTCCTGGCTGCCGTGAATAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| CDS-3UTR TCA 90 bp | GTGGCGGGCCTGGTCATAGTCCTGCAGATGGAAAAAGGCCACTCCGGCCCGATATCCAGACCCCGCAGCTaGAGCAGAGCTCGATGGTAC | + |
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Preference number: 4 (lower is better) Translates to: VAGLVIVLQMEKGHSGPISRPRS*SRARWY Trigger: GTACCATCGAGCTCTGCTTCAGCTGCGGGGTCTGGA...TATCGGGCCGGAGTGGCCTTTTTCCATCTGCAGGACTATGACCAGGCCCGCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| CDS-3UTR TCA 90 bp | GGCCTGGTCATAGTCCTGCAGATGGAAAAAGGCCACTCCGGCCCGATACAAGGCGTGAGGGCCGGGCCCTaGGGTCCGAGATTAGGTAAC | + |
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Preference number: 4 (lower is better) Translates to: GLVIVLQMEKGHSGPIQGVRAGP*GPRLGN Trigger: GTTACCTAATCTCGGACCTCAGGGCCCGGCCCTCAC...GCCTTGTATCGGGCCGGAGTGGCCTTTTTCCATCTGCAGGACTATGACCAGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| CDS-3UTR CCA 90 bp | GGCCACTCCGGCCCGATACAAGGCCTTGGCATTATCAGGCTGTCGTTCCAGGACAGCCTCCCGAGTAGCTaGGTTTACAGGCATGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: GHSGPIQGLGIIRLSFQDSLPSS*VYRHAP Trigger: TGGCGCATGCCTGTAAACCCAGCTACTCGGGAGGCT...GTCCTGGAACGACAGCCTGATAATGCCAAGGCCTTGTATCGGGCCGGAGTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| CDS-3UTR TCA 90 bp | GACTATATTCTCTCACTCGTTCGTAGTTCACGGGCTCCATCTGAAGGAGACAAGGCCCACCCGGCGCCGTaGCCAGTTCCTCGCCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: DYILSLVRSSRAPSEGDKAHPAP*PVPRPL Trigger: CAGAGGGCGAGGAACTGGTCACGGCGCCGGGTGGGC...CTTGTCTCCTTCAGATGGAGCCCGTGAACTACGAACGAGTGAGAGAATATAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| CDS-3UTR GCA 90 bp | CACTCGTTCGTAGTTCACGGGCTCCATCTGAAGGAGACAAGCTGCAGAGGAGTCGAGGGTCGCGCGCATTaGGCCACACCACCCAATCAG | + |
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Preference number: 4 (lower is better) Translates to: HSFVVHGLHLKETSCRGVEGRAH*ATPPNQ Trigger: CTGATTGGGTGGTGTGGCGCAATGCGCGCGACCCTC...GACTCCTCTGCAGCTTGTCTCCTTCAGATGGAGCCCGTGAACTACGAACGAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| CDS-3UTR TCA 90 bp | CCCTTCTTGCTTACCTTTAGGCTGCCTATTCACGGCAGCCAGGAGGTAGTGGCGTCCTCCTTGTACAGCTaGGCCTCCTGCAGACGCTTC | + |
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Preference number: 4 (lower is better) Translates to: PFLLTFRLPIHGSQEVVASSLYS*ASCRRF Trigger: GAAGCGTCTGCAGGAGGCTCAGCTGTACAAGGAGGA...CGCCACTACCTCCTGGCTGCCGTGAATAGGCAGCCTAAAGGTAAGCAAGAAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| CDS-3UTR TCA 90 bp | GGGCCTGGTCATAGTCCTGCAGATGGAAAAAGGCCACTCCGGCCCGATACAAGGTTCACGGGCTCCATCTaGAGGAGACAAGCTGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: GPGHSPADGKRPLRPDTRFTGSI*RRQAAE Trigger: CTCTGCAGCTTGTCTCCTTCAGATGGAGCCCGTGAA...CCTTGTATCGGGCCGGAGTGGCCTTTTTCCATCTGCAGGACTATGACCAGGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| CDS-3UTR GCA 90 bp | GCCTATTCACGGCAGCCAGGAGGTAGTGGCGGGCCTGGTCATAGTCCTGCAGATTGCTTACCTTTAGGCTaGCTATTCACGGCAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: AYSRQPGGSGGPGHSPADCLPLG*LFTAAR Trigger: CCTGGCTGCCGTGAATAGGCAGCCTAAAGGTAAGCA...ATCTGCAGGACTATGACCAGGCCCGCCACTACCTCCTGGCTGCCGTGAATAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| CDS-3UTR CCA 90 bp | GCCTATTCACGGCAGCCAGGAGGTAGTGGCGGGCCTGGTCATAGTCCTGCAGATGAGATGCGTACAGTTTaGTATCTTGAGGGTCGCGCG | + |
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Preference number: 4 (lower is better) Translates to: AYSRQPGGSGGPGHSPADEMRTV*YLEGRA Trigger: CGCGCGACCCTCAAGATACCAAACTGTACGCATCTC...ATCTGCAGGACTATGACCAGGCCCGCCACTACCTCCTGGCTGCCGTGAATAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| CDS-3UTR TCA 90 bp | CCCTTCTTGCTTACCTTTAGGCTGCCTATTCACGGCAGCCAGGAGGTAGTGGCGACTCCTGACCTCAGGTaGTCCACCCACTTTGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: PFLLTFRLPIHGSQEVVATPDLR*STHFGL Trigger: GAGACCAAAGTGGGTGGATCACCTGAGGTCAGGAGT...CGCCACTACCTCCTGGCTGCCGTGAATAGGCAGCCTAAAGGTAAGCAAGAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| CDS-3UTR CCA 90 bp | GCCTATTCACGGCAGCCAGGAGGTAGTGGCGGGCCTGGTCATAGTCCTGCAGATCCCGATACAAGGCCTTaGCATTATCAGGCTGTCGTT | + |
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Preference number: 4 (lower is better) Translates to: AYSRQPGGSGGPGHSPADPDTRP*HYQAVV Trigger: AACGACAGCCTGATAATGCCAAGGCCTTGTATCGGG...ATCTGCAGGACTATGACCAGGCCCGCCACTACCTCCTGGCTGCCGTGAATAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| CDS-3UTR GCA 90 bp | GGGCCTGGTCATAGTCCTGCAGATGGAAAAAGGCCACTCCGGCCCGATACAAGGCTGAAGGAGACAAGCTaGAGAGGAGTCAATTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: GPGHSPADGKRPLRPDTRLKETS*RGVNSG Trigger: GCCTGAATTGACTCCTCTGCAGCTTGTCTCCTTCAG...CCTTGTATCGGGCCGGAGTGGCCTTTTTCCATCTGCAGGACTATGACCAGGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| CDS-3UTR TCA 90 bp | GGCCACTCCGGCCCGATACAAGGCCTTGGCATTATCAGGCTGTCGTTCCAGGACTTTGCTTGTTTCTACTaGAAGCCCCACCTCTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: GHSGPIQGLGIIRLSFQDFACFY*KPHLSF Trigger: AAAGGAGAGGTGGGGCTTTCAGTAGAAACAAGCAAA...GTCCTGGAACGACAGCCTGATAATGCCAAGGCCTTGTATCGGGCCGGAGTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| CDS-3UTR CCA 90 bp | GACTATATTCTCTCACTCGTTCGTAGTTCACGGGCTCCATCTGAAGGAGACAAGGGGCGTGAGAACGCCTaGGACACTGGCTTCCGCCTT | + |
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Preference number: 4 (lower is better) Translates to: DYILSLVRSSRAPSEGDKGRENA*DTGFRL Trigger: AAGGCGGAAGCCAGTGTCCCAGGCGTTCTCACGCCC...CTTGTCTCCTTCAGATGGAGCCCGTGAACTACGAACGAGTGAGAGAATATAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| CDS-3UTR TCA 90 bp | GACTATATTCTCTCACTCGTTCGTAGTTCACGGGCTCCATCTGAAGGAGACAAGACTGGGAAGCCGAGGTaGACCACCAGCGACACTGAG | + |
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Preference number: 4 (lower is better) Translates to: DYILSLVRSSRAPSEGDKTGKPR*TTSDTE Trigger: CTCAGTGTCGCTGGTGGTTCACCTCGGCTTCCCAGT...CTTGTCTCCTTCAGATGGAGCCCGTGAACTACGAACGAGTGAGAGAATATAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| CDS-3UTR TCA 90 bp | CTGTCGTTCCAGGACTTTCTGACTATATTCTCTCACTCGTTCGTAGTTCACGGGGAATTGTTGCGGGCGTaGGAACGCCTGGGACACTGG | + |
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Preference number: 4 (lower is better) Translates to: LSFQDFLTIFSHSFVVHGELLRA*ERLGHW Trigger: CCAGTGTCCCAGGCGTTCTCACGCCCGCAACAATTC...CCCGTGAACTACGAACGAGTGAGAGAATATAGTCAGAAAGTCCTGGAACGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| CDS-3UTR TCA 90 bp | TCCACCTGGGTCAGAGGTATAGGGTTAATTTCTCTTGCTGAGGCTCAGATTTCTTTTCTTGTTCAGGCGTaGGGGCCGGGCCCTGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: STWVRGIGLISLAEAQISFLVQA*GPGPEV Trigger: GACCTCAGGGCCCGGCCCTCACGCCTGAACAAGAAA...AGAAATCTGAGCCTCAGCAAGAGAAATTAACCCTATACCTCTGACCCAGGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000316461.9 ENST00000532583.1 |
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| CDS-3UTR TCA 90 bp | TCCACCTGGGTCAGAGGTATAGGGTTAATTTCTCTTGCTGAGGCTCAGATTTCTTCCAGACCCCGCAGCTaGAGCAGAGCTCGATGGTAC | + |
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Preference number: 4 (lower is better) Translates to: STWVRGIGLISLAEAQISSRPRS*SRARWY Trigger: GTACCATCGAGCTCTGCTTCAGCTGCGGGGTCTGGA...AGAAATCTGAGCCTCAGCAAGAGAAATTAACCCTATACCTCTGACCCAGGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316461.9 ENST00000532583.1 |
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| CDS-3UTR CCA 90 bp | CACTCGTTCGTAGTTCACGGGCTCCATCTGAAGGAGACAAGCTGCAGAGGAGTCGTGAGCCACCCCACCTaGCCTGCCTATTTTATATAT | + |
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Preference number: 4 (lower is better) Translates to: HSFVVHGLHLKETSCRGVVSHPT*PAYFIY Trigger: ATATATAAAATAGGCAGGCCAGGTGGGGTGGCTCAC...GACTCCTCTGCAGCTTGTCTCCTTCAGATGGAGCCCGTGAACTACGAACGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| CDS-3UTR CCA 90 bp | GCACATGGATCCTGGAACTGGGTCAGAGGTATAGGGTTAATTTCTCTTGCTGAGTCTGACTGTGTCAGCTaGAGGTACCGCCGGACGTTG | + |
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Preference number: 4 (lower is better) Translates to: AHGSWNWVRGIGLISLAESDCVS*RYRRTL Trigger: CAACGTCCGGCGGTACCTCCAGCTGACACAGTCAGA...CTCAGCAAGAGAAATTAACCCTATACCTCTGACCCAGTTCCAGGATCCATGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532276.1 |
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| CDS-3UTR TCA 90 bp | TCCACCTGGGTCAGAGGTATAGGGTTAATTTCTCTTGCTGAGGCTCAGATTTCTTCCTCCTTGTACAGCTaGGCCTCCTGCAGACGCTTC | + |
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Preference number: 4 (lower is better) Translates to: STWVRGIGLISLAEAQISSSLYS*ASCRRF Trigger: GAAGCGTCTGCAGGAGGCTCAGCTGTACAAGGAGGA...AGAAATCTGAGCCTCAGCAAGAGAAATTAACCCTATACCTCTGACCCAGGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000316461.9 ENST00000532583.1 |
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| CDS-3UTR TCA 90 bp | CAAACCTGCATATCCTGCACATGGATCCTGGAACTGGGTCAGAGGTATAGGGTTGTAGCTGCTGAGTTCTaGCTGTGTCAGCTGGAGGTA | + |
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Preference number: 4 (lower is better) Translates to: QTCISCTWILELGQRYRVVAAEF*LCQLEV Trigger: TACCTCCAGCTGACACAGTCAGAACTCAGCAGCTAC...AACCCTATACCTCTGACCCAGTTCCAGGATCCATGTGCAGGATATGCAGGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532276.1 |
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| CDS-3UTR GCA 90 bp | CTTGGCATTATCAGGCTGTCGTTCCAGGACTTTCTGACTATATTCTCTCACTCGGTCGCCCACGGTTCTTaGGGAACCTTCTTCCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: LGIIRLSFQDFLTIFSHSVAHGS*GTFFLE Trigger: CTCCAGGAAGAAGGTTCCGCAAGAACCGTGGGCGAC...CGAGTGAGAGAATATAGTCAGAAAGTCCTGGAACGACAGCCTGATAATGCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| CDS-3UTR GCA 90 bp | TCCACCTGGGTCAGAGGTATAGGGTTAATTTCTCTTGCTGAGGCTCAGATTTCTGTCGCCCACGGTTCTTaGGGAACCTTCTTCCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: STWVRGIGLISLAEAQISVAHGS*GTFFLE Trigger: CTCCAGGAAGAAGGTTCCGCAAGAACCGTGGGCGAC...AGAAATCTGAGCCTCAGCAAGAGAAATTAACCCTATACCTCTGACCCAGGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532583.1 |
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| CDS-3UTR GCA 90 bp | CTTACCTTTAGGCTGCCTATTCACGGCAGCCAGGAGGTAGTGGCGGGCCTGGTCTCTGTCTGGGTGGTATaGAATATGTTTTCTTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: LTFRLPIHGSQEVVAGLVSVWVV*NMFSCS Trigger: TGAACAAGAAAACATATTGCATACCACCCAGACAGA...GACCAGGCCCGCCACTACCTCCTGGCTGCCGTGAATAGGCAGCCTAAAGGTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| CDS-3UTR GCA 90 bp | CAAACCTGCATATCCTGCACATGGATCCTGGAACTGGGTCAGAGGTATAGGGTTTTGGCATCTTTAGGCTaGCTATTCACGGCAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: QTCISCTWILELGQRYRVLASLG*LFTAAR Trigger: CCTGGCTGCCGTGAATAGGCAGCCTAAAGATGCCAA...AACCCTATACCTCTGACCCAGTTCCAGGATCCATGTGCAGGATATGCAGGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532276.1 |
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| CDS-3UTR CCA 90 bp | GGGCCTGGTCATAGTCCTGCAGATGGAAAAAGGCCACTCCGGCCCGATACAAGGAGCAGTCTGTCTGGGTaGTATGCAATATGTTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: GPGHSPADGKRPLRPDTRSSLSG*YAICFL Trigger: AAGAAAACATATTGCATACCACCCAGACAGACTGCT...CCTTGTATCGGGCCGGAGTGGCCTTTTTCCATCTGCAGGACTATGACCAGGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| CDS-3UTR CCA 90 bp | GGCCACTCCGGCCCGATACAAGGCCTTGGCATTATCAGGCTGTCGTTCCAGGACAATACTGCTTTTCTGTaGAGACAAGAACACAAGAGT | + |
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Preference number: 4 (lower is better) Translates to: GHSGPIQGLGIIRLSFQDNTAFL*RQEHKS Trigger: ACTCTTGTGTTCTTGTCTCCACAGAAAAGCAGTATT...GTCCTGGAACGACAGCCTGATAATGCCAAGGCCTTGTATCGGGCCGGAGTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| CDS-3UTR CCA 90 bp | TCCACCTGGGTCAGAGGTATAGGGTTAATTTCTCTTGCTGAGGCTCAGATTTCTTCTGACTGTGTCAGCTaGAGGTACCGCCGGACGTTG | + |
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Preference number: 4 (lower is better) Translates to: STWVRGIGLISLAEAQISSDCVS*RYRRTL Trigger: CAACGTCCGGCGGTACCTCCAGCTGACACAGTCAGA...AGAAATCTGAGCCTCAGCAAGAGAAATTAACCCTATACCTCTGACCCAGGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000316461.9 ENST00000532583.1 |
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| CDS-3UTR TCA 90 bp | GGACTTTCTGACTATATTCTCTCACTCGTTCGTAGTTCACGGGCTCCATCTGAAAACCACCAGCGACACTaGGGTGTCCACATAAGCGTC | + |
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Preference number: 4 (lower is better) Translates to: GLSDYILSLVRSSRAPSENHQRH*GVHISV Trigger: GACGCTTATGTGGACACCTCAGTGTCGCTGGTGGTT...TTCAGATGGAGCCCGTGAACTACGAACGAGTGAGAGAATATAGTCAGAAAGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| CDS-3UTR TCA 90 bp | CTGTCGTTCCAGGACTTTCTGACTATATTCTCTCACTCGTTCGTAGTTCACGGGCGATGTGGGGGTGGATaGGACTTTCCGAAGAACTCA | + |
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Preference number: 4 (lower is better) Translates to: LSFQDFLTIFSHSFVVHGRCGGG*DFPKNS Trigger: TGAGTTCTTCGGAAAGTCTCATCCACCCCCACATCG...CCCGTGAACTACGAACGAGTGAGAGAATATAGTCAGAAAGTCCTGGAACGACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| CDS-3UTR TCA 90 bp | CATGCATGTTTAATGGTCCACCTAAGTTCAACTGGAGGAGCATCTTTCTTCTTTGTGAGGGCCGGGCCCTaGGGTCCGAGATTAGGTAAC | + |
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Preference number: 4 (lower is better) Translates to: HACLMVHLSSTGGASFFFVRAGP*GPRLGN Trigger: GTTACCTAATCTCGGACCTCAGGGCCCGGCCCTCAC...AAAGAAGAAAGATGCTCCTCCAGTTGAACTTAGGTGGACCATTAAACATGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000316461.9 ENST00000532583.1 |
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| CDS-3UTR TCA 90 bp | CATGCATGTTTAATGGTCCACCTAAGTTCAACTGGAGGAGCATCTTTCTTCTTTTTTCTTGTTCAGGCGTaGGGGCCGGGCCCTGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: HACLMVHLSSTGGASFFFFLVQA*GPGPEV Trigger: GACCTCAGGGCCCGGCCCTCACGCCTGAACAAGAAA...AAAGAAGAAAGATGCTCCTCCAGTTGAACTTAGGTGGACCATTAAACATGCATG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000316461.9 ENST00000532583.1 |
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| CDS-3UTR GCA 90 bp | TCCACCTGGGTCAGAGGTATAGGGTTAATTTCTCTTGCTGAGGCTCAGATTTCTCTACTCAGGAATTGTTaGGGGCGTGAGAACGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: STWVRGIGLISLAEAQISLLRNC*GRENAW Trigger: CCAGGCGTTCTCACGCCCGCAACAATTCCTGAGTAG...AGAAATCTGAGCCTCAGCAAGAGAAATTAACCCTATACCTCTGACCCAGGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316461.9 |
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| CDS-3UTR CCA 90 bp | CTGTCGTTCCAGGACTTTCTGACTATATTCTCTCACTCGTTCGTAGTTCACGGGCCTAAAGAGGCGATGTaGGGGTGGATGAGACTTTCC | + |
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Preference number: 4 (lower is better) Translates to: LSFQDFLTIFSHSFVVHGPKEAM*GWMRLS Trigger: GGAAAGTCTCATCCACCCCCACATCGCCTCTTTAGG...CCCGTGAACTACGAACGAGTGAGAGAATATAGTCAGAAAGTCCTGGAACGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294161.10 |
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| CDS-3UTR TCA 90 bp | TCCACCTGGGTCAGAGGTATAGGGTTAATTTCTCTTGCTGAGGCTCAGATTTCTCGATGTGGGGGTGGATaGGACTTTCCGAAGAACTCA | + |
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Preference number: 4 (lower is better) Translates to: STWVRGIGLISLAEAQISRCGGG*DFPKNS Trigger: TGAGTTCTTCGGAAAGTCTCATCCACCCCCACATCG...AGAAATCTGAGCCTCAGCAAGAGAAATTAACCCTATACCTCTGACCCAGGTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316461.9 |
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| CDS-3UTR TCA 90 bp | TCCACCTGGGTCAGAGGTATAGGGTTAATTTCTCTTGCTGAGGCTCAGATTTCTTTCACGGGCTCCATCTaGAGGAGACAAGCAGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: STWVRGIGLISLAEAQISFTGSI*RRQAAR Trigger: TCTAGCTGCTTGTCTCCTTCAGATGGAGCCCGTGAA...AGAAATCTGAGCCTCAGCAAGAGAAATTAACCCTATACCTCTGACCCAGGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000316461.9 ENST00000532583.1 |
||
| CDS-3UTR TCA 90 bp | TCCACCTGGGTCAGAGGTATAGGGTTAATTTCTCTTGCTGAGGCTCAGATTTCTGTAGCTGCTGAGTTCTaGCTGTGTCAGCTGGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: STWVRGIGLISLAEAQISVAAEF*LCQLEV Trigger: TACCTCCAGCTGACACAGTCAGAACTCAGCAGCTAC...AGAAATCTGAGCCTCAGCAAGAGAAATTAACCCTATACCTCTGACCCAGGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000316461.9 ENST00000532583.1 |
||
| CDS-3UTR CCA 90 bp | GACTATATTCTCTCACTCGTTCGTAGTTCACGGGCTCCATCTGAAGGAGACAAGGGAAGTAGAAGGGAGTaGGCGGGACTAGTGCTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: DYILSLVRSSRAPSEGDKGSRRE*AGLVLK Trigger: TTTTAGCACTAGTCCCGCCCACTCCCTTCTACTTCC...CTTGTCTCCTTCAGATGGAGCCCGTGAACTACGAACGAGTGAGAGAATATAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS-3UTR CCA 90 bp | GGACTTTCTGACTATATTCTCTCACTCGTTCGTAGTTCACGGGCTCCATCTGAAGAGGCGATGTGGGGGTaGATGAGACTTTCCGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLSDYILSLVRSSRAPSEEAMWG*MRLSEE Trigger: TTCTTCGGAAAGTCTCATCCACCCCCACATCGCCTC...TTCAGATGGAGCCCGTGAACTACGAACGAGTGAGAGAATATAGTCAGAAAGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS-3UTR CCA 90 bp | TCCACCTGGGTCAGAGGTATAGGGTTAATTTCTCTTGCTGAGGCTCAGATTTCTCGGTTCTTGCGGAACTaGGAAGTGAAGGAGCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: STWVRGIGLISLAEAQISRFLRN*EVKEQV Trigger: CACTTGCTCCTTCACTTCCCAGTTCCGCAAGAACCG...AGAAATCTGAGCCTCAGCAAGAGAAATTAACCCTATACCTCTGACCCAGGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316461.9 |
||
| CDS-3UTR TCA 90 bp | GAGACAAGAACACAAGAGTGGAAAAAGGTCTGTTCATCGTATACTTTTTCAGTTTTTCTTGTTCAGGCGTaGGGGCCGGGCCCTGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ETRTQEWKKVCSSYTFSVFLVQA*GPGPEV Trigger: GACCTCAGGGCCCGGCCCTCACGCCTGAACAAGAAA...AACTGAAAAAGTATACGATGAACAGACCTTTTTCCACTCTTGTGTTCTTGTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS-3UTR GCA 90 bp | ACTGCTTTTCTGTGGAGACAAGAACACAAGAGTGGAAAAAGGTCTGTTCATCGTCAGTTCCTCGCCCTCTaGAGATGCCCAAACCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TAFLWRQEHKSGKRSVHRQFLAL*RCPNLE Trigger: TTCCAGGTTTGGGCATCTGCAGAGGGCGAGGAACTG...ACGATGAACAGACCTTTTTCCACTCTTGTGTTCTTGTCTCCACAGAAAAGCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS-3UTR GCA 90 bp | TCCACCTGGGTCAGAGGTATAGGGTTAATTTCTCTTGCTGAGGCTCAGATTTCTCAGGGACCTGCGGTTTaGTTGTTTCTACTGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: STWVRGIGLISLAEAQISQGPAV*LFLLKA Trigger: GGCTTTCAGTAGAAACAAGCAAACCGCAGGTCCCTG...AGAAATCTGAGCCTCAGCAAGAGAAATTAACCCTATACCTCTGACCCAGGTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000316461.9 ENST00000532583.1 |
||
| CDS-3UTR GCA 90 bp | GCACATGGATCCTGGAACTGGGTCAGAGGTATAGGGTTAATTTCTCTTGCTGAGCAAACCTGCATATCCTaGACATGGATCCTGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: AHGSWNWVRGIGLISLAEQTCIS*TWILEL Trigger: CAGTTCCAGGATCCATGTGCAGGATATGCAGGTTTG...CTCAGCAAGAGAAATTAACCCTATACCTCTGACCCAGTTCCAGGATCCATGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532276.1 |
||
| CDS-3UTR CCA 90 bp | TCCACCTGGGTCAGAGGTATAGGGTTAATTTCTCTTGCTGAGGCTCAGATTTCTCCCGATACAAGGCCTTaGCATTATCAGGCTGTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: STWVRGIGLISLAEAQISPDTRP*HYQAVV Trigger: AACGACAGCCTGATAATGCCAAGGCCTTGTATCGGG...AGAAATCTGAGCCTCAGCAAGAGAAATTAACCCTATACCTCTGACCCAGGTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000316461.9 ENST00000532583.1 |
||
| CDS-3UTR CCA 90 bp | CATGCATGTTTAATGGTCCACCTAAGTTCAACTGGAGGAGCATCTTTCTTCTTTTCTGACTGTGTCAGCTaGAGGTACCGCCGGACGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HACLMVHLSSTGGASFFFSDCVS*RYRRTL Trigger: CAACGTCCGGCGGTACCTCCAGCTGACACAGTCAGA...AAAGAAGAAAGATGCTCCTCCAGTTGAACTTAGGTGGACCATTAAACATGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000316461.9 ENST00000532276.1 ENST00000532583.1 |
||
| CDS-3UTR TCA 90 bp | GACTATATTCTCTCACTCGTTCGTAGTTCACGGGCTCCATCTGAAGGAGACAAGAAGCCCAACATTAAGTaGCTTCCTAAAGAGGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: DYILSLVRSSRAPSEGDKKPNIK*LPKEAM Trigger: CATCGCCTCTTTAGGAAGTCACTTAATGTTGGGCTT...CTTGTCTCCTTCAGATGGAGCCCGTGAACTACGAACGAGTGAGAGAATATAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS-3UTR TCA 90 bp | GGCCCGATACAAGGCCTTGGCATTATCAGGCTGTCGTTCCAGGACTTTCTGACTTATATTGTGTATGTCTaGTTAAGCATCAACCCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: GPIQGLGIIRLSFQDFLTYIVYV*LSINPL Trigger: TAGGGGGTTGATGCTTAATCAGACATACACAATATA...AGTCAGAAAGTCCTGGAACGACAGCCTGATAATGCCAAGGCCTTGTATCGGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS-3UTR TCA 90 bp | TCCACCTGGGTCAGAGGTATAGGGTTAATTTCTCTTGCTGAGGCTCAGATTTCTTTCTATGGTAGCTGCTaGGTTCTGACTGTGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: STWVRGIGLISLAEAQISFYGSC*VLTVSA Trigger: AGCTGACACAGTCAGAACTCAGCAGCTACCATAGAA...AGAAATCTGAGCCTCAGCAAGAGAAATTAACCCTATACCTCTGACCCAGGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000316461.9 ENST00000532583.1 |
||
| CDS-3UTR TCA 90 bp | GATAGGTGCAGCAAACCACCGAGGCACACGTTTCCCTATGTAACAAACCTGCATGTTAATTTCTCTTGCTaGGGCTCAGATTTCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DRCSKPPRHTFPYVTNLHVNFSC*GSDFSF Trigger: GAAGGAGAAATCTGAGCCTCAGCAAGAGAAATTAAC...ATGCAGGTTTGTTACATAGGGAAACGTGTGCCTCGGTGGTTTGCTGCACCTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532276.1 |
||
| CDS-3UTR GCA 90 bp | GATAGGTGCAGCAAACCACCGAGGCACACGTTTCCCTATGTAACAAACCTGCATTTTGTTAACCAAACATaGCCAGGTAGAGCTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DRCSKPPRHTFPYVTNLHFVNQT*PGRAAS Trigger: AGAAGCAGCTCTACCTGGGCATGTTTGGTTAACAAA...ATGCAGGTTTGTTACATAGGGAAACGTGTGCCTCGGTGGTTTGCTGCACCTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532276.1 |
||
| CDS-3UTR CCA 90 bp | TCCACCTGGGTCAGAGGTATAGGGTTAATTTCTCTTGCTGAGGCTCAGATTTCTGAGCAAGTGAAGCTCTaGGGTTGGGAGCAAAATAAC | + |
|
Preference number: 4 (lower is better) Translates to: STWVRGIGLISLAEAQISEQVKL*GWEQNN Trigger: GTTATTTTGCTCCCAACCCCAGAGCTTCACTTGCTC...AGAAATCTGAGCCTCAGCAAGAGAAATTAACCCTATACCTCTGACCCAGGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316461.9 |
||
| CDS-3UTR TCA 90 bp | TCCACCTGGGTCAGAGGTATAGGGTTAATTTCTCTTGCTGAGGCTCAGATTTCTAAGCCCAACATTAAGTaGCTTCCTAAAGAGGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: STWVRGIGLISLAEAQISKPNIK*LPKEAM Trigger: CATCGCCTCTTTAGGAAGTCACTTAATGTTGGGCTT...AGAAATCTGAGCCTCAGCAAGAGAAATTAACCCTATACCTCTGACCCAGGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316461.9 |
||
| CDS-3UTR TCA 90 bp | TCCACCTGGGTCAGAGGTATAGGGTTAATTTCTCTTGCTGAGGCTCAGATTTCTTTTGCTTGTTTCTACTaGAAGCCCCACCTCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: STWVRGIGLISLAEAQISFACFY*KPHLSF Trigger: AAAGGAGAGGTGGGGCTTTCAGTAGAAACAAGCAAA...AGAAATCTGAGCCTCAGCAAGAGAAATTAACCCTATACCTCTGACCCAGGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000316461.9 ENST00000532583.1 |
||
| CDS-3UTR TCA 90 bp | TCCACCTGGGTCAGAGGTATAGGGTTAATTTCTCTTGCTGAGGCTCAGATTTCTCGTTCCAGGACTTTCTaGCTATATTCTCTCACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: STWVRGIGLISLAEAQISRSRTF*LYSLTR Trigger: ACGAGTGAGAGAATATAGTCAGAAAGTCCTGGAACG...AGAAATCTGAGCCTCAGCAAGAGAAATTAACCCTATACCTCTGACCCAGGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000316461.9 ENST00000532583.1 |
||
| CDS-3UTR TCA 90 bp | CATGCATGTTTAATGGTCCACCTAAGTTCAACTGGAGGAGCATCTTTCTTCTTTTTCACGGGCTCCATCTaGAGGAGACAAGCAGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: HACLMVHLSSTGGASFFFFTGSI*RRQAAR Trigger: TCTAGCTGCTTGTCTCCTTCAGATGGAGCCCGTGAA...AAAGAAGAAAGATGCTCCTCCAGTTGAACTTAGGTGGACCATTAAACATGCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000316461.9 ENST00000532583.1 |
||
| CDS-3UTR GCA 90 bp | CTTGGCATTATCAGGCTGTCGTTCCAGGACTTTCTGACTATATTCTCTCACTCGGGAAAGGGTCAGAGATaGGTACAGTTTGGTATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGIIRLSFQDFLTIFSHSGKGQR*VQFGIL Trigger: CAAGATACCAAACTGTACGCATCTCTGACCCTTTCC...CGAGTGAGAGAATATAGTCAGAAAGTCCTGGAACGACAGCCTGATAATGCCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS-3UTR GCA 90 bp | GAAACTAATAATACTGCTTTTCTGTGGAGACAAGAACACAAGAGTGGAAAAAGGCTCGCCCTCTGCAGATaGCCAAACCTGGAAGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ETNNTAFLWRQEHKSGKRLALCR*PNLEVS Trigger: GGAGACTTCCAGGTTTGGGCATCTGCAGAGGGCGAG...CCTTTTTCCACTCTTGTGTTCTTGTCTCCACAGAAAAGCAGTATTATTAGTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS-3UTR GCA 90 bp | GACAAGAACACAAGAGTGGAAAAAGGTCTGTTCATCGTATACTTTTTCAGTTCGCTACTCAGGAATTGTTaGGGGCGTGAGAACGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DKNTRVEKGLFIVYFFSSLLRNC*GRENAW Trigger: CCAGGCGTTCTCACGCCCGCAACAATTCCTGAGTAG...CGAACTGAAAAAGTATACGATGAACAGACCTTTTTCCACTCTTGTGTTCTTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS-3UTR GCA 90 bp | CATGCATGTTTAATGGTCCACCTAAGTTCAACTGGAGGAGCATCTTTCTTCTTTTTGGCATCTTTAGGCTaGCTATTCACGGCAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HACLMVHLSSTGGASFFFLASLG*LFTAAR Trigger: CCTGGCTGCCGTGAATAGGCAGCCTAAAGATGCCAA...AAAGAAGAAAGATGCTCCTCCAGTTGAACTTAGGTGGACCATTAAACATGCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000316461.9 ENST00000532276.1 ENST00000532583.1 |
||
| CDS-3UTR CCA 90 bp | CATGCATGTTTAATGGTCCACCTAAGTTCAACTGGAGGAGCATCTTTCTTCTTTCCTAAAGAGGCGATGTaGGGGTGGATGAGACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HACLMVHLSSTGGASFFFPKEAM*GWMRLS Trigger: GGAAAGTCTCATCCACCCCCACATCGCCTCTTTAGG...AAAGAAGAAAGATGCTCCTCCAGTTGAACTTAGGTGGACCATTAAACATGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316461.9 |
||
| CDS-3UTR TCA 90 bp | GAGTGGAAAAAGGTCTGTTCATCGTATACTTTTTCAGTTCGAATTCTCAACCATTACAGTTTGGTATCTTaGGGGTCGCGCGCATTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: EWKKVCSSYTFSVRILNHYSLVS*GSRALR Trigger: GCGCAATGCGCGCGACCCTCAAGATACCAAACTGTA...ATGGTTGAGAATTCGAACTGAAAAAGTATACGATGAACAGACCTTTTTCCACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS-3UTR TCA 90 bp | TCCACCTGGGTCAGAGGTATAGGGTTAATTTCTCTTGCTGAGGCTCAGATTTCTGTTAATTTCTCTTGCTaGGGCTCAGATTTCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: STWVRGIGLISLAEAQISVNFSC*GSDFSF Trigger: GAAGGAGAAATCTGAGCCTCAGCAAGAGAAATTAAC...AGAAATCTGAGCCTCAGCAAGAGAAATTAACCCTATACCTCTGACCCAGGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000316461.9 ENST00000532583.1 |
||
| CDS-3UTR GCA 90 bp | TCCACCTGGGTCAGAGGTATAGGGTTAATTTCTCTTGCTGAGGCTCAGATTTCTTTTGTTAACCAAACATaGCCAGGTAGAGCTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: STWVRGIGLISLAEAQISFVNQT*PGRAAS Trigger: AGAAGCAGCTCTACCTGGGCATGTTTGGTTAACAAA...AGAAATCTGAGCCTCAGCAAGAGAAATTAACCCTATACCTCTGACCCAGGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316461.9 ENST00000532583.1 |
||
| CDS-3UTR GCA 90 bp | GCACATGGATCCTGGAACTGGGTCAGAGGTATAGGGTTAATTTCTCTTGCTGAGCAGATTTCTCCTTCATaGATGTTTAATGGTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: AHGSWNWVRGIGLISLAEQISPS*MFNGPP Trigger: AGGTGGACCATTAAACATGCATGAAGGAGAAATCTG...CTCAGCAAGAGAAATTAACCCTATACCTCTGACCCAGTTCCAGGATCCATGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532276.1 |
||
| CDS-3UTR CCA 90 bp | AAGACAATTTTGTCTTTACCATTTCAAAGCCCTTCTTGCTTACCTTTAGGCTGCAACCTGGAAGTCTCCTaGGCTTCGGTTTACCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KTILSLPFQSPSCLPLGCNLEVS*ASVYQQ Trigger: CTGCTGGTAAACCGAAGCCCAGGAGACTTCCAGGTT...GCAGCCTAAAGGTAAGCAAGAAGGGCTTTGAAATGGTAAAGACAAAATTGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS-3UTR CCA 90 bp | CATGCATGTTTAATGGTCCACCTAAGTTCAACTGGAGGAGCATCTTTCTTCTTTCCCGATACAAGGCCTTaGCATTATCAGGCTGTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: HACLMVHLSSTGGASFFFPDTRP*HYQAVV Trigger: AACGACAGCCTGATAATGCCAAGGCCTTGTATCGGG...AAAGAAGAAAGATGCTCCTCCAGTTGAACTTAGGTGGACCATTAAACATGCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000316461.9 ENST00000532583.1 |
||
| 3UTR CAA 72 bp | CAAGACAATTTTGTCTTTACCATTTCAAAGCCCTTCTaGCTTACCTTTAGGCTGCCTATTCACGGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QDNFVFTISKPF*LTFRLPIHGSQ Trigger: CTGGCTGCCGTGAATAGGCAGCCTAAAGGTAAGCAAGAAGGGCTTTGAAATGGTAAAGACAAAATTGTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS-3UTR TCA 90 bp | ACTGCTTTTCTGTGGAGACAAGAACACAAGAGTGGAAAAAGGTCTGTTCATCGTCGTTCCAGGACTTTCTaGCTATATTCTCTCACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: TAFLWRQEHKSGKRSVHRRSRTF*LYSLTR Trigger: ACGAGTGAGAGAATATAGTCAGAAAGTCCTGGAACG...ACGATGAACAGACCTTTTTCCACTCTTGTGTTCTTGTCTCCACAGAAAAGCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS-3UTR TCA 90 bp | CATGCATGTTTAATGGTCCACCTAAGTTCAACTGGAGGAGCATCTTTCTTCTTTTTCTATGGTAGCTGCTaGGTTCTGACTGTGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HACLMVHLSSTGGASFFFFYGSC*VLTVSA Trigger: AGCTGACACAGTCAGAACTCAGCAGCTACCATAGAA...AAAGAAGAAAGATGCTCCTCCAGTTGAACTTAGGTGGACCATTAAACATGCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000316461.9 ENST00000532276.1 ENST00000532583.1 |
||
| CDS-3UTR CCA 90 bp | CATGCATGTTTAATGGTCCACCTAAGTTCAACTGGAGGAGCATCTTTCTTCTTTCATGGATCCTGGAACTaGGTCAGAGGTATAGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: HACLMVHLSSTGGASFFFHGSWN*VRGIGL Trigger: TAACCCTATACCTCTGACCCAGTTCCAGGATCCATG...AAAGAAGAAAGATGCTCCTCCAGTTGAACTTAGGTGGACCATTAAACATGCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532276.1 |
||
| CDS-3UTR TCA 90 bp | CATGCATGTTTAATGGTCCACCTAAGTTCAACTGGAGGAGCATCTTTCTTCTTTTTTGCTTGTTTCTACTaGAAGCCCCACCTCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HACLMVHLSSTGGASFFFFACFY*KPHLSF Trigger: AAAGGAGAGGTGGGGCTTTCAGTAGAAACAAGCAAA...AAAGAAGAAAGATGCTCCTCCAGTTGAACTTAGGTGGACCATTAAACATGCATG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000316461.9 ENST00000532583.1 |
||
| CDS-3UTR GCA 90 bp | GAGTGGAAAAAGGTCTGTTCATCGTATACTTTTTCAGTTCGAATTCTCAACCATCAGGGACCTGCGGTTTaGTTGTTTCTACTGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EWKKVCSSYTFSVRILNHQGPAV*LFLLKA Trigger: GGCTTTCAGTAGAAACAAGCAAACCGCAGGTCCCTG...ATGGTTGAGAATTCGAACTGAAAAAGTATACGATGAACAGACCTTTTTCCACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS-3UTR GCA 90 bp | TCCACCTGGGTCAGAGGTATAGGGTTAATTTCTCTTGCTGAGGCTCAGATTTCTTCTGTCTGGGTGGTATaGAATATGTTTTCTTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: STWVRGIGLISLAEAQISSVWVV*NMFSCS Trigger: TGAACAAGAAAACATATTGCATACCACCCAGACAGA...AGAAATCTGAGCCTCAGCAAGAGAAATTAACCCTATACCTCTGACCCAGGTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316461.9 ENST00000532583.1 |
||
| CDS-3UTR GCA 90 bp | CATGCATGTTTAATGGTCCACCTAAGTTCAACTGGAGGAGCATCTTTCTTCTTTTTTGTTAACCAAACATaGCCAGGTAGAGCTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HACLMVHLSSTGGASFFFFVNQT*PGRAAS Trigger: AGAAGCAGCTCTACCTGGGCATGTTTGGTTAACAAA...AAAGAAGAAAGATGCTCCTCCAGTTGAACTTAGGTGGACCATTAAACATGCATG 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENST00000316461.9 ENST00000532276.1 ENST00000532583.1 |
||
| CDS-3UTR GCA 90 bp | GACAAGAACACAAGAGTGGAAAAAGGTCTGTTCATCGTATACTTTTTCAGTTCGTTTCAAAGCCCTTCTTaGTTACCTTTAGGCTGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: DKNTRVEKGLFIVYFFSSFQSPS*LPLGCL Trigger: TAGGCAGCCTAAAGGTAAGCAAGAAGGGCTTTGAAA...CGAACTGAAAAAGTATACGATGAACAGACCTTTTTCCACTCTTGTGTTCTTGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS-3UTR GCA 90 bp | CATGCATGTTTAATGGTCCACCTAAGTTCAACTGGAGGAGCATCTTTCTTCTTTCAGATTTCTCCTTCATaGATGTTTAATGGTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: HACLMVHLSSTGGASFFFQISPS*MFNGPP Trigger: AGGTGGACCATTAAACATGCATGAAGGAGAAATCTG...AAAGAAGAAAGATGCTCCTCCAGTTGAACTTAGGTGGACCATTAAACATGCATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000316461.9 ENST00000532276.1 ENST00000532583.1 |
||
| CDS-3UTR CCA 90 bp | CATGCATGTTTAATGGTCCACCTAAGTTCAACTGGAGGAGCATCTTTCTTCTTTAGCAGTCTGTCTGGGTaGTATGCAATATGTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HACLMVHLSSTGGASFFFSSLSG*YAICFL Trigger: AAGAAAACATATTGCATACCACCCAGACAGACTGCT...AAAGAAGAAAGATGCTCCTCCAGTTGAACTTAGGTGGACCATTAAACATGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316461.9 ENST00000532583.1 |
||
| CDS-3UTR CCA 90 bp | CATGCATGTTTAATGGTCCACCTAAGTTCAACTGGAGGAGCATCTTTCTTCTTTAAACAAAAATCCACCTaGGTCAGAGGTATAGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: HACLMVHLSSTGGASFFFKQKST*VRGIGL Trigger: TAACCCTATACCTCTGACCCAGGTGGATTTTTGTTT...AAAGAAGAAAGATGCTCCTCCAGTTGAACTTAGGTGGACCATTAAACATGCATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000316461.9 ENST00000532583.1 |
||
| CDS-3UTR GCA 90 bp | CATGCATGTTTAATGGTCCACCTAAGTTCAACTGGAGGAGCATCTTTCTTCTTTTCTGTCTGGGTGGTATaGAATATGTTTTCTTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HACLMVHLSSTGGASFFFSVWVV*NMFSCS Trigger: TGAACAAGAAAACATATTGCATACCACCCAGACAGA...AAAGAAGAAAGATGCTCCTCCAGTTGAACTTAGGTGGACCATTAAACATGCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000316461.9 ENST00000532583.1 |
||
| CDS-3UTR CCA 90 bp | TGGAGACAAGAACACAAGAGTGGAAAAAGGTCTGTTCATCGTATACTTTTTCAGACAAGAACACAAGAGTaGAAAAAGGTCTGTTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: WRQEHKSGKRSVHRILFQTRTQE*KKVCSS Trigger: CGATGAACAGACCTTTTTCCACTCTTGTGTTCTTGT...CTGAAAAAGTATACGATGAACAGACCTTTTTCCACTCTTGTGTTCTTGTCTCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS-3UTR GCA 90 bp | GAAACTAATAATACTGCTTTTCTGTGGAGACAAGAACACAAGAGTGGAAAAAGGCCACCCCACCTGGCCTaGCTATTTTATATATATATT | + |
|
Preference number: 4 (lower is better) Translates to: ETNNTAFLWRQEHKSGKRPPHLA*LFYIYI Trigger: AATATATATATAAAATAGGCAGGCCAGGTGGGGTGG...CCTTTTTCCACTCTTGTGTTCTTGTCTCCACAGAAAAGCAGTATTATTAGTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS GCA 90 bp | TGCAAGCCCACCCGGCGCCGTGACCAGTTCCTCGCCCTCTGCAGATaGCCAAACCTGGAAGTCTCCTGGGCTTCGGTTTACCAGCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CKPTRRRDQFLALCR*PNLEVSWASVYQQE Trigger: CTCCTGCTGGTAAACCGAAGCCCAGGAGACTTCCAGGTTTGGGCATCTGCAGAGGGCGAGGAACTGGTCACGGCGCCGGGTGGGCTTGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS GCA 90 bp | CACAGCTGCAAGCCCACCCGGCGCCGTGACCAGTTCCTCGCCCTCTaGAGATGCCCAAACCTGGAAGTCTCCTGGGCTTCGGTTTACCAG | + |
|
Preference number: 5 (lower is better) Translates to: HSCKPTRRRDQFLAL*RCPNLEVSWASVYQ Trigger: CTGGTAAACCGAAGCCCAGGAGACTTCCAGGTTTGGGCATCTGCAGAGGGCGAGGAACTGGTCACGGCGCCGGGTGGGCTTGCAGCTGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS GCA 90 bp | GGTGAACCACCAGCGACACTGAGGTGTCCACATAAGCGTCACAGCTaGAAGCCCACCCGGCGCCGTGACCAGTTCCTCGCCCTCTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GEPPATLRCPHKRHS*KPTRRRDQFLALCR Trigger: TCTGCAGAGGGCGAGGAACTGGTCACGGCGCCGGGTGGGCTTGCAGCTGTGACGCTTATGTGGACACCTCAGTGTCGCTGGTGGTTCACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS TCA 90 bp | TCCGAAGAACTCAAGCAAGGCCCTACTCAGGAATTGTTGCGGGCGTaGGAACGCCTGGGACACTGGCTTCCGCCTTTCTATTGGACCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SEELKQGPTQELLRA*ERLGHWLPPFYWTR Trigger: GCGGGTCCAATAGAAAGGCGGAAGCCAGTGTCCCAGGCGTTCTCACGCCCGCAACAATTCCTGAGTAGGGCCTTGCTTGAGTTCTTCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS GCA 90 bp | GGCTTCGGTTTACCAGCAGGAGCAAGGAGAGGAAAGGGTCAGAGATaGGTACAGTTTGGTATCTTGAGGGTCGCGCGCATTGCGCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: GFGLPAGARRGKGQR*VQFGILRVARIAPH Trigger: GTGTGGCGCAATGCGCGCGACCCTCAAGATACCAAACTGTACGCATCTCTGACCCTTTCCTCTCCTTGCTCCTGCTGGTAAACCGAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000294161.10 ENST00000530625.5 |
||
| CDS CCA 90 bp | ACCAGCAGGAGCAAGGAGAGGAAAGGGTCAGAGATGCGTACAGTTTaGTATCTTGAGGGTCGCGCGCATTGCGCCACACCACCCAATCAG | + |
|
Preference number: 5 (lower is better) Translates to: TSRSKERKGSEMRTV*YLEGRAHCATPPNQ Trigger: CTGATTGGGTGGTGTGGCGCAATGCGCGCGACCCTCAAGATACCAAACTGTACGCATCTCTGACCCTTTCCTCTCCTTGCTCCTGCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000294161.10 ENST00000530625.5 |
||
| CDS TCA 90 bp | AGATTAGGTAACGGAGAGGGCAGACTCGGATCCAGACCCCGCAGCTaGAGCAGAGCTCGATGGTACCTACTCACAGCATCTCGGTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLGNGEGRLGSRPRS*SRARWYLLTASRYF Trigger: GAAGTACCGAGATGCTGTGAGTAGGTACCATCGAGCTCTGCTTCAGCTGCGGGGTCTGGATCCGAGTCTGCCCTCTCCGTTACCTAATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000294161.10 ENST00000316461.9 ENST00000530625.5 ENST00000532583.1 |
||
| CDS TCA 90 bp | GTGGTATGCAATATGTTTTCTTGTTCAGGCGTGAGGGCCGGGCCCTaGGGTCCGAGATTAGGTAACGGAGAGGGCAGACTCGGATCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VVCNMFSCSGVRAGP*GPRLGNGEGRLGSR Trigger: TCTGGATCCGAGTCTGCCCTCTCCGTTACCTAATCTCGGACCTCAGGGCCCGGCCCTCACGCCTGAACAAGAAAACATATTGCATACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000294161.10 ENST00000316461.9 ENST00000530625.5 ENST00000532583.1 |
||
| CDS TCA 90 bp | GAGCAAGGAGAGGAAAGGGTCAGAGATGCGTACAGTTTGGTATCTTaGGGGTCGCGCGCATTGCGCCACACCACCCAATCAGAAGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: EQGEERVRDAYSLVS*GSRALRHTTQSEEA Trigger: AGCCTCTTCTGATTGGGTGGTGTGGCGCAATGCGCGCGACCCTCAAGATACCAAACTGTACGCATCTCTGACCCTTTCCTCTCCTTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000530625.5 |
||
| CDS TCA 90 bp | GCCCAGGTAGAGCTGCTTCTCTTTTCTATGGTAGCTGCTGAGTTCTaGCTGTGTCAGCTGGAGGTACCGCCGGACGTTGGCATCTTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: AQVELLLFSMVAAEF*LCQLEVPPDVGIFR Trigger: CCTAAAGATGCCAACGTCCGGCGGTACCTCCAGCTGACACAGTCAGAACTCAGCAGCTACCATAGAAAAGAGAAGCAGCTCTACCTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000316461.9 ENST00000532276.1 ENST00000532583.1 |
||
| CDS GCA 90 bp | GGGTCAGAGATGCGTACAGTTTGGTATCTTGAGGGTCGCGCGCATTaGGCCACACCACCCAATCAGAAGAGGCTCCGGAAAAATAATCCC | + |
|
Preference number: 5 (lower is better) Translates to: GSEMRTVWYLEGRAH*ATPPNQKRLRKNNP Trigger: GGGATTATTTTTCCGGAGCCTCTTCTGATTGGGTGGTGTGGCGCAATGCGCGCGACCCTCAAGATACCAAACTGTACGCATCTCTGACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000530625.5 |
||
| CDS CCA 90 bp | CTGCAGACGCTTCTCCATAACTGTCGCCCACGGTTCTTGCGGAACTaGGAAGTGAAGGAGCAAGTGAAGCTCTGGGGTTGGGAGCAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LQTLLHNCRPRFLRN*EVKEQVKLWGWEQN Trigger: ATTTTGCTCCCAACCCCAGAGCTTCACTTGCTCCTTCACTTCCCAGTTCCGCAAGAACCGTGGGCGACAGTTATGGAGAAGCGTCTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316461.9 |
||
| CDS-3UTR CAA 90 bp | GGCCCGATACAAGGCCTTGGCATTATCAGGCTGTCGTTCCAGGACTTTCTGACTGCCCGATACAAGGCCTaGGCATTATCAGGCTGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: GPIQGLGIIRLSFQDFLTARYKA*ALSGCR Trigger: ACGACAGCCTGATAATGCCAAGGCCTTGTATCGGGC...AGTCAGAAAGTCCTGGAACGACAGCCTGATAATGCCAAGGCCTTGTATCGGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS TCA 90 bp | CAAACATGCCCAGGTAGAGCTGCTTCTCTTTTCTATGGTAGCTGCTaGGTTCTGACTGTGTCAGCTGGAGGTACCGCCGGACGTTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: QTCPGRAASLFYGSC*VLTVSAGGTAGRWH Trigger: ATGCCAACGTCCGGCGGTACCTCCAGCTGACACAGTCAGAACTCAGCAGCTACCATAGAAAAGAGAAGCAGCTCTACCTGGGCATGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000316461.9 ENST00000532276.1 ENST00000532583.1 |
||
| CDS-3UTR CAA 90 bp | CTTACCTTTAGGCTGCCTATTCACGGCAGCCAGGAGGTAGTGGCGGGCCTGGTCCCCAGCAAGACAATTTaGTCTTTACCATTTCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LTFRLPIHGSQEVVAGLVPSKTI*SLPFQS Trigger: GCTTTGAAATGGTAAAGACAAAATTGTCTTGCTGGG...GACCAGGCCCGCCACTACCTCCTGGCTGCCGTGAATAGGCAGCCTAAAGGTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS-3UTR CAA 90 bp | TCCACCTGGGTCAGAGGTATAGGGTTAATTTCTCTTGCTGAGGCTCAGATTTCTTGTCGCCCACGGTTCTaGCGGAACTGGGAAGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: STWVRGIGLISLAEAQISCRPRF*RNWEVK Trigger: CTTCACTTCCCAGTTCCGCAAGAACCGTGGGCGACA...AGAAATCTGAGCCTCAGCAAGAGAAATTAACCCTATACCTCTGACCCAGGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316461.9 |
||
| CDS-3UTR CAA 90 bp | TCCACCTGGGTCAGAGGTATAGGGTTAATTTCTCTTGCTGAGGCTCAGATTTCTAGGTACCGCCGGACGTaGGCATCTTTAGGCTGCCTA | + |
|
Preference number: 5 (lower is better) Translates to: STWVRGIGLISLAEAQISRYRRT*ASLGCL Trigger: TAGGCAGCCTAAAGATGCCAACGTCCGGCGGTACCT...AGAAATCTGAGCCTCAGCAAGAGAAATTAACCCTATACCTCTGACCCAGGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000316461.9 ENST00000532583.1 |
||
| CDS-3UTR CAA 90 bp | TCCACCTGGGTCAGAGGTATAGGGTTAATTTCTCTTGCTGAGGCTCAGATTTCTGCCCGATACAAGGCCTaGGCATTATCAGGCTGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: STWVRGIGLISLAEAQISARYKA*ALSGCR Trigger: ACGACAGCCTGATAATGCCAAGGCCTTGTATCGGGC...AGAAATCTGAGCCTCAGCAAGAGAAATTAACCCTATACCTCTGACCCAGGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000316461.9 ENST00000532583.1 |
||
| CDS TCA 90 bp | AGCCCAACATTAAGTGACTTCCTAAAGAGGCGATGTGGGGGTGGATaGGACTTTCCGAAGAACTCAAGCAAGGCCCTACTCAGGAATTGT | + |
|
Preference number: 5 (lower is better) Translates to: SPTLSDFLKRRCGGG*DFPKNSSKALLRNC Trigger: ACAATTCCTGAGTAGGGCCTTGCTTGAGTTCTTCGGAAAGTCTCATCCACCCCCACATCGCCTCTTTAGGAAGTCACTTAATGTTGGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000294161.10 ENST00000316461.9 |
||
| CDS-3UTR CAA 90 bp | TCCACCTGGGTCAGAGGTATAGGGTTAATTTCTCTTGCTGAGGCTCAGATTTCTGGACCTGCGGTTTGCTaGTTTCTACTGAAAGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: STWVRGIGLISLAEAQISGPAVC*FLLKAP Trigger: TGGGGCTTTCAGTAGAAACAAGCAAACCGCAGGTCC...AGAAATCTGAGCCTCAGCAAGAGAAATTAACCCTATACCTCTGACCCAGGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316461.9 ENST00000532583.1 |
||
| CDS-3UTR CAA 90 bp | CTGTCGTTCCAGGACTTTCTGACTATATTCTCTCACTCGTTCGTAGTTCACGGGACAGGGACCTGCGGTTaGCTTGTTTCTACTGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSFQDFLTIFSHSFVVHGTGTCG*LVSTES Trigger: GCTTTCAGTAGAAACAAGCAAACCGCAGGTCCCTGT...CCCGTGAACTACGAACGAGTGAGAGAATATAGTCAGAAAGTCCTGGAACGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS-3UTR CAA 90 bp | TCCACCTGGGTCAGAGGTATAGGGTTAATTTCTCTTGCTGAGGCTCAGATTTCTACAGGGACCTGCGGTTaGCTTGTTTCTACTGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: STWVRGIGLISLAEAQISTGTCG*LVSTES Trigger: GCTTTCAGTAGAAACAAGCAAACCGCAGGTCCCTGT...AGAAATCTGAGCCTCAGCAAGAGAAATTAACCCTATACCTCTGACCCAGGTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000316461.9 ENST00000532583.1 |
||
| CDS-3UTR CAA 90 bp | CATGCATGTTTAATGGTCCACCTAAGTTCAACTGGAGGAGCATCTTTCTTCTTTTGTCGCCCACGGTTCTaGCGGAACCTTCTTCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: HACLMVHLSSTGGASFFFCRPRF*RNLLPG Trigger: TCCAGGAAGAAGGTTCCGCAAGAACCGTGGGCGACA...AAAGAAGAAAGATGCTCCTCCAGTTGAACTTAGGTGGACCATTAAACATGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532583.1 |
||
| CDS-3UTR CAA 90 bp | TCCACCTGGGTCAGAGGTATAGGGTTAATTTCTCTTGCTGAGGCTCAGATTTCTATGCAATATGTTTTCTaGTTCAGGCGTGAGGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: STWVRGIGLISLAEAQISMQYVF*FRREGR Trigger: CCGGCCCTCACGCCTGAACAAGAAAACATATTGCAT...AGAAATCTGAGCCTCAGCAAGAGAAATTAACCCTATACCTCTGACCCAGGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316461.9 ENST00000532583.1 |
||
| CDS-3UTR CAA 90 bp | CATGCATGTTTAATGGTCCACCTAAGTTCAACTGGAGGAGCATCTTTCTTCTTTAGGTACCGCCGGACGTaGGCATCTTTAGGCTGCCTA | + |
|
Preference number: 5 (lower is better) Translates to: HACLMVHLSSTGGASFFFRYRRT*ASLGCL Trigger: TAGGCAGCCTAAAGATGCCAACGTCCGGCGGTACCT...AAAGAAGAAAGATGCTCCTCCAGTTGAACTTAGGTGGACCATTAAACATGCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000316461.9 ENST00000532276.1 ENST00000532583.1 |
||
| CDS-3UTR CAA 90 bp | GACAAGAACACAAGAGTGGAAAAAGGTCTGTTCATCGTATACTTTTTCAGTTCGTGTCGCCCACGGTTCTaGCGGAACCTTCTTCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: DKNTRVEKGLFIVYFFSSCRPRF*RNLLPG Trigger: TCCAGGAAGAAGGTTCCGCAAGAACCGTGGGCGACA...CGAACTGAAAAAGTATACGATGAACAGACCTTTTTCCACTCTTGTGTTCTTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS-3UTR CAA 90 bp | CATGCATGTTTAATGGTCCACCTAAGTTCAACTGGAGGAGCATCTTTCTTCTTTGCCCGATACAAGGCCTaGGCATTATCAGGCTGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: HACLMVHLSSTGGASFFFARYKA*ALSGCR Trigger: ACGACAGCCTGATAATGCCAAGGCCTTGTATCGGGC...AAAGAAGAAAGATGCTCCTCCAGTTGAACTTAGGTGGACCATTAAACATGCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000316461.9 ENST00000532583.1 |
||
| CDS TCA 90 bp | AGTAGTAAGGAAAGGGATGTGGGAATAATGAAGCCCAACATTAAGTaGCTTCCTAAAGAGGCGATGTGGGGGTGGATGAGACTTTCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: SSKERDVGIMKPNIK*LPKEAMWGWMRLSE Trigger: TTCGGAAAGTCTCATCCACCCCCACATCGCCTCTTTAGGAAGTCACTTAATGTTGGGCTTCATTATTCCCACATCCCTTTCCTTACTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000294161.10 ENST00000316461.9 |
||
| CDS-3UTR CAA 90 bp | AAGACAATTTTGTCTTTACCATTTCAAAGCCCTTCTTGCTTACCTTTAGGCTGCGTACAGTTTGGTATCTaGAGGGTCGCGCGCATTGCG | + |
|
Preference number: 5 (lower is better) Translates to: KTILSLPFQSPSCLPLGCVQFGI*RVARIA Trigger: CGCAATGCGCGCGACCCTCAAGATACCAAACTGTAC...GCAGCCTAAAGGTAAGCAAGAAGGGCTTTGAAATGGTAAAGACAAAATTGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS-3UTR CAA 90 bp | AAGACAATTTTGTCTTTACCATTTCAAAGCCCTTCTTGCTTACCTTTAGGCTGCGGACCTGCGGTTTGCTaGTTTCTACTGAAAGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KTILSLPFQSPSCLPLGCGPAVC*FLLKAP Trigger: TGGGGCTTTCAGTAGAAACAAGCAAACCGCAGGTCC...GCAGCCTAAAGGTAAGCAAGAAGGGCTTTGAAATGGTAAAGACAAAATTGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS-3UTR CAA 90 bp | GAGACAAGAACACAAGAGTGGAAAAAGGTCTGTTCATCGTATACTTTTTCAGTTATGCAATATGTTTTCTaGTTCAGGCGTGAGGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: ETRTQEWKKVCSSYTFSVMQYVF*FRREGR Trigger: CCGGCCCTCACGCCTGAACAAGAAAACATATTGCAT...AACTGAAAAAGTATACGATGAACAGACCTTTTTCCACTCTTGTGTTCTTGTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS-3UTR CAA 90 bp | GACAATTTTGTCTTTACCATTTCAAAGCCCTTCTTGCTTACCTTTAGGCTGCCTATTTCAAAGCCCTTCTaGCTTACCTTTAGGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: DNFVFTISKPFLLTFRLPISKPF*LTFRLP Trigger: AGGCAGCCTAAAGGTAAGCAAGAAGGGCTTTGAAAT...AGGCAGCCTAAAGGTAAGCAAGAAGGGCTTTGAAATGGTAAAGACAAAATTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS-3UTR CAA 90 bp | CATGCATGTTTAATGGTCCACCTAAGTTCAACTGGAGGAGCATCTTTCTTCTTTGAGCATCTTTCTTCTTaGTTAACCAAACATGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HACLMVHLSSTGGASFFFEHLSS*LTKHAQ Trigger: CTGGGCATGTTTGGTTAACAAAGAAGAAAGATGCTC...AAAGAAGAAAGATGCTCCTCCAGTTGAACTTAGGTGGACCATTAAACATGCATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000316461.9 ENST00000532276.1 ENST00000532583.1 |
||
| CDS GCA 72 bp | CCAGCGACACTGAGGTGTCCACATAAGCGTCACAGCTaGAAGCCCACCCGGCGCCGTGACCAGTTCCTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: PATLRCPHKRHS*KPTRRRDQFLA Trigger: GGCGAGGAACTGGTCACGGCGCCGGGTGGGCTTGCAGCTGTGACGCTTATGTGGACACCTCAGTGTCGCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS CCA 72 bp | GCCCTACTCAGGAATTGTTGCGGGCGTGAGAACGCCTaGGACACTGGCTTCCGCCTTTCTATTGGACCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: ALLRNCCGRENA*DTGFRLSIGPA Trigger: GGCGGGTCCAATAGAAAGGCGGAAGCCAGTGTCCCAGGCGTTCTCACGCCCGCAACAATTCCTGAGTAGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS CAA 90 bp | CTGAGCCTCCTGCAGACGCTTCTCCATAACTGTCGCCCACGGTTCTaGCGGAACTGGGAAGTGAAGGAGCAAGTGAAGCTCTGGGGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LSLLQTLLHNCRPRF*RNWEVKEQVKLWGW Trigger: CCAACCCCAGAGCTTCACTTGCTCCTTCACTTCCCAGTTCCGCAAGAACCGTGGGCGACAGTTATGGAGAAGCGTCTGCAGGAGGCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316461.9 |
||
| CDS TCA 72 bp | AACGGAGAGGGCAGACTCGGATCCAGACCCCGCAGCTaGAGCAGAGCTCGATGGTACCTACTCACAGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: NGEGRLGSRPRS*SRARWYLLTAS Trigger: AGATGCTGTGAGTAGGTACCATCGAGCTCTGCTTCAGCTGCGGGGTCTGGATCCGAGTCTGCCCTCTCCGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000294161.10 ENST00000316461.9 ENST00000530625.5 ENST00000532583.1 |
||
| CDS CAA 90 bp | GGAGCAAGGAGAGGAAAGGGTCAGAGATGCGTACAGTTTGGTATCTaGAGGGTCGCGCGCATTGCGCCACACCACCCAATCAGAAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GARRGKGQRCVQFGI*RVARIAPHHPIRRG Trigger: GCCTCTTCTGATTGGGTGGTGTGGCGCAATGCGCGCGACCCTCAAGATACCAAACTGTACGCATCTCTGACCCTTTCCTCTCCTTGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530625.5 |
||
| CDS TCA 72 bp | CTCAAGCAAGGCCCTACTCAGGAATTGTTGCGGGCGTaGGAACGCCTGGGACACTGGCTTCCGCCTTTCTAT | + |
|
Preference number: 6 (lower is better) Translates to: LKQGPTQELLRA*ERLGHWLPPFY Trigger: ATAGAAAGGCGGAAGCCAGTGTCCCAGGCGTTCTCACGCCCGCAACAATTCCTGAGTAGGGCCTTGCTTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS TCA 72 bp | GAGGAAAGGGTCAGAGATGCGTACAGTTTGGTATCTTaGGGGTCGCGCGCATTGCGCCACACCACCCAATCA | + |
|
Preference number: 6 (lower is better) Translates to: EERVRDAYSLVS*GSRALRHTTQS Trigger: TGATTGGGTGGTGTGGCGCAATGCGCGCGACCCTCAAGATACCAAACTGTACGCATCTCTGACCCTTTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000294161.10 ENST00000530625.5 |
||
| CDS TCA 72 bp | ATAAACTGGGAAGCCGAGGTGAACCACCAGCGACACTaGGGTGTCCACATAAGCGTCACAGCTGCAAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: INWEAEVNHQRH*GVHISVTAASP Trigger: TGGGCTTGCAGCTGTGACGCTTATGTGGACACCTCAGTGTCGCTGGTGGTTCACCTCGGCTTCCCAGTTTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294161.10 |
||
| CDS TCA 72 bp | AATATGTTTTCTTGTTCAGGCGTGAGGGCCGGGCCCTaGGGTCCGAGATTAGGTAACGGAGAGGGCAGACTC | + |
|
Preference number: 6 (lower is better) Translates to: NMFSCSGVRAGP*GPRLGNGEGRL Trigger: GAGTCTGCCCTCTCCGTTACCTAATCTCGGACCTCAGGGCCCGGCCCTCACGCCTGAACAAGAAAACATATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000294161.10 ENST00000316461.9 ENST00000530625.5 ENST00000532583.1 |
||
| CDS TCA 72 bp | GAGCTGCTTCTCTTTTCTATGGTAGCTGCTGAGTTCTaGCTGTGTCAGCTGGAGGTACCGCCGGACGTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ELLLFSMVAAEF*LCQLEVPPDVG Trigger: GCCAACGTCCGGCGGTACCTCCAGCTGACACAGTCAGAACTCAGCAGCTACCATAGAAAAGAGAAGCAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000316461.9 ENST00000532276.1 ENST00000532583.1 |
||
| CDS GCA 72 bp | ATGCGTACAGTTTGGTATCTTGAGGGTCGCGCGCATTaGGCCACACCACCCAATCAGAAGAGGCTCCGGAAA | + |
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Preference number: 6 (lower is better) Translates to: MRTVWYLEGRAH*ATPPNQKRLRK Trigger: TTTCCGGAGCCTCTTCTGATTGGGTGGTGTGGCGCAATGCGCGCGACCCTCAAGATACCAAACTGTACGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530625.5 |
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| CDS CCA 72 bp | AGCAAGGAGAGGAAAGGGTCAGAGATGCGTACAGTTTaGTATCTTGAGGGTCGCGCGCATTGCGCCACACCA | + |
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Preference number: 6 (lower is better) Translates to: SKERKGSEMRTV*YLEGRAHCATP Trigger: TGGTGTGGCGCAATGCGCGCGACCCTCAAGATACCAAACTGTACGCATCTCTGACCCTTTCCTCTCCTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000294161.10 ENST00000530625.5 |
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| CDS CAA 72 bp | AGAGGAAAGGGTCAGAGATGCGTACAGTTTGGTATCTaGAGGGTCGCGCGCATTGCGCCACACCACCCAATC | + |
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Preference number: 6 (lower is better) Translates to: RGKGQRCVQFGI*RVARIAPHHPI Trigger: GATTGGGTGGTGTGGCGCAATGCGCGCGACCCTCAAGATACCAAACTGTACGCATCTCTGACCCTTTCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000294161.10 ENST00000530625.5 |
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| CDS CAA 72 bp | ATAGCAGTCTGTCTGGGTGGTATGCAATATGTTTTCTaGTTCAGGCGTGAGGGCCGGGCCCTGAGGTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: IAVCLGGMQYVF*FRREGRALRSE Trigger: CTCGGACCTCAGGGCCCGGCCCTCACGCCTGAACAAGAAAACATATTGCATACCACCCAGACAGACTGCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000294161.10 ENST00000316461.9 ENST00000530625.5 ENST00000532583.1 |
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| CDS CAA 72 bp | CTGCAGACGCTTCTCCATAACTGTCGCCCACGGTTCTaGCGGAACTGGGAAGTGAAGGAGCAAGTGAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: LQTLLHNCRPRF*RNWEVKEQVKL Trigger: GAGCTTCACTTGCTCCTTCACTTCCCAGTTCCGCAAGAACCGTGGGCGACAGTTATGGAGAAGCGTCTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316461.9 |
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| CDS TCA 72 bp | CCAGGTAGAGCTGCTTCTCTTTTCTATGGTAGCTGCTaGGTTCTGACTGTGTCAGCTGGAGGTACCGCCGGA | + |
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Preference number: 6 (lower is better) Translates to: PGRAASLFYGSC*VLTVSAGGTAG Trigger: TCCGGCGGTACCTCCAGCTGACACAGTCAGAACTCAGCAGCTACCATAGAAAAGAGAAGCAGCTCTACCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000316461.9 ENST00000532276.1 ENST00000532583.1 |
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| CDS TCA 72 bp | TTAAGTGACTTCCTAAAGAGGCGATGTGGGGGTGGATaGGACTTTCCGAAGAACTCAAGCAAGGCCCTACTC | + |
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Preference number: 6 (lower is better) Translates to: LSDFLKRRCGGG*DFPKNSSKALL Trigger: GAGTAGGGCCTTGCTTGAGTTCTTCGGAAAGTCTCATCCACCCCCACATCGCCTCTTTAGGAAGTCACTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000294161.10 ENST00000316461.9 |
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| CDS TCA 72 bp | GAAAGGGATGTGGGAATAATGAAGCCCAACATTAAGTaGCTTCCTAAAGAGGCGATGTGGGGGTGGATGAGA | + |
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Preference number: 6 (lower is better) Translates to: ERDVGIMKPNIK*LPKEAMWGWMR Trigger: TCTCATCCACCCCCACATCGCCTCTTTAGGAAGTCACTTAATGTTGGGCTTCATTATTCCCACATCCCTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000294161.10 ENST00000316461.9 |
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| CDS GCA 72 bp | ACTGGAGGAGCATCTTTCTTCTTTGTTAACCAAACATaGCCAGGTAGAGCTGCTTCTCTTTTCTATGGTAGC | + |
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Preference number: 6 (lower is better) Translates to: TGGASFFFVNQT*PGRAASLFYGS Trigger: GCTACCATAGAAAAGAGAAGCAGCTCTACCTGGGCATGTTTGGTTAACAAAGAAGAAAGATGCTCCTCCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000316461.9 ENST00000532276.1 ENST00000532583.1 |
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