Pregenerated sensors for TTC9B (Homo sapiens)
Ensembl gene IDs: ENSG00000174521Ensembl transcript IDs: ENST00000311308.6, ENST00000593586.1
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AAGTGTTTTACCAACAAACACATGAGTCGGGGGAAGTTACATGGTGAGGTGGGAGCTCCGGGGCAGCGCTaGGCATCAGCACCGGGGACA | + |
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Preference number: 4 (lower is better) Translates to: KCFTNKHMSRGKLHGEVGAPGQR*ASAPGT Trigger: TGTCCCCGGTGCTGATGCTCAGCGCTGCCCCGGAGC...TCCCACCTCACCATGTAACTTCCCCCGACTCATGTGTTTGTTGGTAAAACACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS-3UTR TCA 90 bp | AAGTGTTTTACCAACAAACACATGAGTCGGGGGAAGTTACATGGTGAGGTGGGAGCTGGCCCTCTGCCTTaGACGCCACGGCGGCACGCA | + |
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Preference number: 4 (lower is better) Translates to: KCFTNKHMSRGKLHGEVGAGPLP*TPRRHA Trigger: TGCGTGCCGCCGTGGCGTTCAAGGCAGAGGGCCAGC...TCCCACCTCACCATGTAACTTCCCCCGACTCATGTGTTTGTTGGTAAAACACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS-3UTR GCA 90 bp | ACCAGTGACAAGTGTTTTACCAACAAACACATGAGTCGGGGGAAGTTACATGGTCTAGGGCGGGCCCCCTaGGCCGCCTTCAGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: TSDKCFTNKHMSRGKLHGLGRAP*AAFSCS Trigger: GCTGCAGCTGAAGGCGGCGCAGGGGGCCCGCCCTAG...ACCATGTAACTTCCCCCGACTCATGTGTTTGTTGGTAAAACACTTGTCACTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS-3UTR CCA 90 bp | AAGTGTTTTACCAACAAACACATGAGTCGGGGGAAGTTACATGGTGAGGTGGGAGCTCCCCGACGGCTCTaGGGTAGGACCGGGACGAGC | + |
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Preference number: 4 (lower is better) Translates to: KCFTNKHMSRGKLHGEVGAPRRL*GRTGTS Trigger: GCTCGTCCCGGTCCTACCCCAGAGCCGTCGGGGAGC...TCCCACCTCACCATGTAACTTCCCCCGACTCATGTGTTTGTTGGTAAAACACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS-3UTR GCA 90 bp | ACCAGTGACAAGTGTTTTACCAACAAACACATGAGTCGGGGGAAGTTACATGGTGCAGCGCTGGCCCTCTaGCTTGAACGCCACGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: TSDKCFTNKHMSRGKLHGAALAL*LERHGG Trigger: GCCGCCGTGGCGTTCAAGGCAGAGGGCCAGCGCTGC...ACCATGTAACTTCCCCCGACTCATGTGTTTGTTGGTAAAACACTTGTCACTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS-3UTR GCA 90 bp | ATCACCAGTGACAAGTGTTTTACCAACAAACACATGAGTCGGGGGAAGTTACATTCCACCAGGCGCCGCTaGTCCTCGCTGAGGCGCGCC | + |
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Preference number: 4 (lower is better) Translates to: ITSDKCFTNKHMSRGKLHSTRRR*SSLRRA Trigger: GGCGCGCCTCAGCGAGGAGCAGCGGCGCCTGGTGGA...ATGTAACTTCCCCCGACTCATGTGTTTGTTGGTAAAACACTTGTCACTGGTGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS-3UTR GCA 90 bp | ACCAGTGACAAGTGTTTTACCAACAAACACATGAGTCGGGGGAAGTTACATGGTCTGTGGGTTCCCGGCTaGGGGCCTCCTGCAGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: TSDKCFTNKHMSRGKLHGLWVPG*GPPAGS Trigger: GCTACCTGCAGGAGGCCCGCAGCCGGGAACCCACAG...ACCATGTAACTTCCCCCGACTCATGTGTTTGTTGGTAAAACACTTGTCACTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS-3UTR GCA 90 bp | GACAAGTGTTTTACCAACAAACACATGAGTCGGGGGAAGTTACATGGTGAGGTGGACAGCGCGCCGCGCTaGATTGTGGGAAACTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: DKCFTNKHMSRGKLHGEVDSAPR*IVGNSC Trigger: GCAGGAGTTTCCCACAATGCAGCGCGGCGCGCTGTC...CACCTCACCATGTAACTTCCCCCGACTCATGTGTTTGTTGGTAAAACACTTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS-3UTR GCA 90 bp | AAGTGTTTTACCAACAAACACATGAGTCGGGGGAAGTTACATGGTGAGGTGGGAGCGCTCGGTGGTACTTaGCGATGGCCTCCCGGAACT | + |
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Preference number: 4 (lower is better) Translates to: KCFTNKHMSRGKLHGEVGALGGT*RWPPGT Trigger: AGTTCCGGGAGGCCATCGGCAAGTACCACCGAGCGC...TCCCACCTCACCATGTAACTTCCCCCGACTCATGTGTTTGTTGGTAAAACACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS-3UTR CCA 90 bp | AAGTGTTTTACCAACAAACACATGAGTCGGGGGAAGTTACATGGTGAGGTGGGAGCACATTGGTGTCTGTaGGTTCCCGGCTGCGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: KCFTNKHMSRGKLHGEVGAHWCL*VPGCGP Trigger: AGGCCCGCAGCCGGGAACCCACAGACACCAATGTGC...TCCCACCTCACCATGTAACTTCCCCCGACTCATGTGTTTGTTGGTAAAACACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS-3UTR GCA 90 bp | ATGATCACCAGTGACAAGTGTTTTACCAACAAACACATGAGTCGGGGGAAGTTATGCGCCGCCTTCAGCTaGAGCAGCGCTCGGTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: MITSDKCFTNKHMSRGKLCAAFS*SSARWY Trigger: GTACCACCGAGCGCTGCTGCAGCTGAAGGCGGCGCA...TAACTTCCCCCGACTCATGTGTTTGTTGGTAAAACACTTGTCACTGGTGATCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS-3UTR GCA 90 bp | GACAAGTGTTTTACCAACAAACACATGAGTCGGGGGAAGTTACATGGTGAGGTGGGTGGTAGAAGGCAATaGCGGCACGGTAGGTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: DKCFTNKHMSRGKLHGEVGGRRQ*RHGRWP Trigger: AGGCCACCTACCGTGCCGGCATTGCCTTCTACCACC...CACCTCACCATGTAACTTCCCCCGACTCATGTGTTTGTTGGTAAAACACTTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS-3UTR TCA 90 bp | ACCAGTGACAAGTGTTTTACCAACAAACACATGAGTCGGGGGAAGTTACATGGTGCAGCAGGCAAGCCGTaGGGGAGTCGTAACACTCCA | + |
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Preference number: 4 (lower is better) Translates to: TSDKCFTNKHMSRGKLHGAAGKP*GSRNTP Trigger: TGGAGTGTTACGACTCCCTCACGGCTTGCCTGCTGC...ACCATGTAACTTCCCCCGACTCATGTGTTTGTTGGTAAAACACTTGTCACTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS-3UTR CCA 90 bp | ATCACCAGTGACAAGTGTTTTACCAACAAACACATGAGTCGGGGGAAGTTACATTGCAGCAGCGCTCGGTaGTACTTGCCGATGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: ITSDKCFTNKHMSRGKLHCSSAR*YLPMAS Trigger: GGAGGCCATCGGCAAGTACCACCGAGCGCTGCTGCA...ATGTAACTTCCCCCGACTCATGTGTTTGTTGGTAAAACACTTGTCACTGGTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS-3UTR TCA 90 bp | ACCAGTGACAAGTGTTTTACCAACAAACACATGAGTCGGGGGAAGTTACATGGTGCTTCTCCAGTACCTTaGGACAGTACTCGCGCACGC | + |
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Preference number: 4 (lower is better) Translates to: TSDKCFTNKHMSRGKLHGASPVP*DSTRAR Trigger: GCGTGCGCGAGTACTGTCTCAAGGTACTGGAGAAGC...ACCATGTAACTTCCCCCGACTCATGTGTTTGTTGGTAAAACACTTGTCACTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS-3UTR CCA 90 bp | ACCAGTGACAAGTGTTTTACCAACAAACACATGAGTCGGGGGAAGTTACATGGTTGTAGCGGAGCACATTaGTGTCTGTGGGTTCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: TSDKCFTNKHMSRGKLHGCSGAH*CLWVPG Trigger: GCCGGGAACCCACAGACACCAATGTGCTCCGCTACA...ACCATGTAACTTCCCCCGACTCATGTGTTTGTTGGTAAAACACTTGTCACTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS-3UTR TCA 90 bp | ATGATCACCAGTGACAAGTGTTTTACCAACAAACACATGAGTCGGGGGAAGTTACACGGTAGGTGGCCTTaGAGTTGCCCTGCTGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: MITSDKCFTNKHMSRGKLHGRWP*SCPAAS Trigger: AGAAGCAGCAGGGCAACTTCAAGGCCACCTACCGTG...TAACTTCCCCCGACTCATGTGTTTGTTGGTAAAACACTTGTCACTGGTGATCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS-3UTR GCA 90 bp | AAGTGTTTTACCAACAAACACATGAGTCGGGGGAAGTTACATGGTGAGGTGGGACTTCCCGCTGGAGGCTaGAACGATTCATCTTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: KCFTNKHMSRGKLHGEVGLPAGG*NDSSSA Trigger: AGCTGAAGATGAATCGTTGCAGCCTCCAGCGGGAAG...TCCCACCTCACCATGTAACTTCCCCCGACTCATGTGTTTGTTGGTAAAACACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS-3UTR CCA 90 bp | ACCAGTGACAAGTGTTTTACCAACAAACACATGAGTCGGGGGAAGTTACATGGTGGTGGTACTTGCCGATaGCCTCCCGGAACTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: TSDKCFTNKHMSRGKLHGGGTCR*PPGTSS Trigger: AGAAGAAGTTCCGGGAGGCCATCGGCAAGTACCACC...ACCATGTAACTTCCCCCGACTCATGTGTTTGTTGGTAAAACACTTGTCACTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS-3UTR CCA 90 bp | ATGATCACCAGTGACAAGTGTTTTACCAACAAACACATGAGTCGGGGGAAGTTACCACTGTCTTCCCGCTaGAGGCTGCAACGATTCATC | + |
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Preference number: 4 (lower is better) Translates to: MITSDKCFTNKHMSRGKLPLSSR*RLQRFI Trigger: GATGAATCGTTGCAGCCTCCAGCGGGAAGACAGTGG...TAACTTCCCCCGACTCATGTGTTTGTTGGTAAAACACTTGTCACTGGTGATCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS-3UTR CCA 90 bp | ATCACCAGTGACAAGTGTTTTACCAACAAACACATGAGTCGGGGGAAGTTACATATTACATCCCGAGTCTaGGACCCAGCCCCACTGTCT | + |
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Preference number: 4 (lower is better) Translates to: ITSDKCFTNKHMSRGKLHITSRV*DPAPLS Trigger: AGACAGTGGGGCTGGGTCCCAGACTCGGGATGTAAT...ATGTAACTTCCCCCGACTCATGTGTTTGTTGGTAAAACACTTGTCACTGGTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS-3UTR CCA 90 bp | ATGATCACCAGTGACAAGTGTTTTACCAACAAACACATGAGTCGGGGGAAGTTAGAGGTCCCCCTGGATTaGCCTCAGCCAATTACATCC | + |
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Preference number: 4 (lower is better) Translates to: MITSDKCFTNKHMSRGKLEVPLD*PQPITS Trigger: GGATGTAATTGGCTGAGGCCAATCCAGGGGGACCTC...TAACTTCCCCCGACTCATGTGTTTGTTGGTAAAACACTTGTCACTGGTGATCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS-3UTR GCA 90 bp | ATGATCACCAGTGACAAGTGTTTTACCAACAAACACATGAGTCGGGGGAAGTTAGCCTTGAAGTTGCCCTaGTGCTTCTCCAGTACCTTG | + |
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Preference number: 4 (lower is better) Translates to: MITSDKCFTNKHMSRGKLALKLP*CFSSTL Trigger: CAAGGTACTGGAGAAGCAGCAGGGCAACTTCAAGGC...TAACTTCCCCCGACTCATGTGTTTGTTGGTAAAACACTTGTCACTGGTGATCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS-3UTR CCA 90 bp | ATCACCAGTGACAAGTGTTTTACCAACAAACACATGAGTCGGGGGAAGTTACATATAGAGAGGTCCCCCTaGATTGGCCTCAGCCAATTA | + |
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Preference number: 4 (lower is better) Translates to: ITSDKCFTNKHMSRGKLHIERSP*IGLSQL Trigger: TAATTGGCTGAGGCCAATCCAGGGGGACCTCTCTAT...ATGTAACTTCCCCCGACTCATGTGTTTGTTGGTAAAACACTTGTCACTGGTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS-3UTR TCA 90 bp | ACCAGTGACAAGTGTTTTACCAACAAACACATGAGTCGGGGGAAGTTACATGGTTTACCAACAAACACATaGGTCGGGGGAAGTTACATG | + |
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Preference number: 4 (lower is better) Translates to: TSDKCFTNKHMSRGKLHGLPTNT*VGGSYM Trigger: CATGTAACTTCCCCCGACTCATGTGTTTGTTGGTAA...ACCATGTAACTTCCCCCGACTCATGTGTTTGTTGGTAAAACACTTGTCACTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS-3UTR GCA 90 bp | ATCACCAGTGACAAGTGTTTTACCAACAAACACATGAGTCGGGGGAAGTTACATTTGAAGTTGCCCTGCTaGTTCTCCAGTACCTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: ITSDKCFTNKHMSRGKLHLKLPC*FSSTLR Trigger: TCTCAAGGTACTGGAGAAGCAGCAGGGCAACTTCAA...ATGTAACTTCCCCCGACTCATGTGTTTGTTGGTAAAACACTTGTCACTGGTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS CCA 90 bp | ACGCAGGCTGCTGTCGAGCGCCGCGCCCAGGCTCCCCGACGGCTCTaGGGTAGGACCGGGACGAGCCGAGCCATGGCGGGAGCCCGAGCC | + |
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Preference number: 5 (lower is better) Translates to: TQAAVERRAQAPRRL*GRTGTSRAMAGARA Trigger: GGCTCGGGCTCCCGCCATGGCTCGGCTCGTCCCGGTCCTACCCCAGAGCCGTCGGGGAGCCTGGGCGCGGCGCTCGACAGCAGCCTGCGT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311308.6 ENST00000593586.1 |
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| CDS CCA 90 bp | GCACTAAGGCCCCGCGCGGGGGCGAGGGCCGGGACCTCGAGAGCCTaGCTCAGGGCAGACTTCCTCACCTTGGGTCCACGTGCGGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: ALRPRAGARAGTSRA*LRADFLTLGPRAAR Trigger: CCTGGCCGCACGTGGACCCAAGGTGAGGAAGTCTGCCCTGAGCCAGGCTCTCGAGGTCCCGGCCCTCGCCCCCGCGCGGGGCCTTAGTGC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS CCA 90 bp | CAGGCAAGCTGCGAGGGCCCCGCGGCCGGCACTCTCAGAGCCTGCTaGCACCCCCAGAACCCACCTGACTGCGAGGAGCCGAGGCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: QASCEGPAAGTLRAC*HPQNPPDCEEPRLQ Trigger: CTGGAGCCTCGGCTCCTCGCAGTCAGGTGGGTTCTGGGGGTGCCAGCAGGCTCTGAGAGTGCCGGCCGCGGGGCCCTCGCAGCTTGCCTG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS TCA 90 bp | CGCGGCCGGCACTCTCAGAGCCTGCTGGCACCCCCAGAACCCACCTaGCTGCGAGGAGCCGAGGCTCCAGGCGGCAGGGAACCAGGCCTA | + |
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Preference number: 5 (lower is better) Translates to: RGRHSQSLLAPPEPT*LRGAEAPGGREPGL Trigger: TAGGCCTGGTTCCCTGCCGCCTGGAGCCTCGGCTCCTCGCAGTCAGGTGGGTTCTGGGGGTGCCAGCAGGCTCTGAGAGTGCCGGCCGCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS TCA 90 bp | CCTCCCGGAACTTCTTCTCTCGATAGCAGCGCTGGCCCTCTGCCTTaGACGCCACGGCGGCACGCAGGCTGCTGTCGAGCGCCGCGCCCA | + |
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Preference number: 5 (lower is better) Translates to: PPGTSSLDSSAGPLP*TPRRHAGCCRAPRP Trigger: TGGGCGCGGCGCTCGACAGCAGCCTGCGTGCCGCCGTGGCGTTCAAGGCAGAGGGCCAGCGCTGCTATCGAGAGAAGAAGTTCCGGGAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000311308.6 ENST00000593586.1 |
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| CDS GCA 90 bp | CGAGGAGCCGAGGCTCCAGGCGGCAGGGAACCAGGCCTAAGGGATTaGTCCGGCAACCAGGGGCGCCAATCCGCTCGCCTATCGAAACAG | + |
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Preference number: 5 (lower is better) Translates to: RGAEAPGGREPGLRD*SGNQGRQSARLSKQ Trigger: CTGTTTCGATAGGCGAGCGGATTGGCGCCCCTGGTTGCCGGAGCAATCCCTTAGGCCTGGTTCCCTGCCGCCTGGAGCCTCGGCTCCTCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS CCA 90 bp | AACTGCGCCGCTGCTAGGGGGCGCCAAAACACGGACAGGCGCCACTaGGCGATCCACCCAGAGCTGTCGGTGGGCAAGAGCACTAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: NCAAARGRQNTDRRH*AIHPELSVGKSTKA Trigger: GGCCTTAGTGCTCTTGCCCACCGACAGCTCTGGGTGGATCGCCCAGTGGCGCCTGTCCGTGTTTTGGCGCCCCCTAGCAGCGGCGCAGTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS GCA 90 bp | GGTGGCGCAGCCCTACCTAGAAGCAGCTCCGCGGGAGGAGGGCTCTaGTATTCTGCCCTGATCTTCCTGCCTGTTCCCTCCGCTGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: GGAALPRSSSAGGGL*YSALIFLPVPSAAA Trigger: GGCTGCAGCGGAGGGAACAGGCAGGAAGATCAGGGCAGAATAGCAGAGCCCTCCTCCCGCGGAGCTGCTTCTAGGTAGGGCTGCGCCACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS CCA 90 bp | GGGCCGGGACCTCGAGAGCCTGGCTCAGGGCAGACTTCCTCACCTTaGGTCCACGTGCGGCCAGGGGGTGGAAAGAATGACTCAGGGGAA | + |
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Preference number: 5 (lower is better) Translates to: GPGPREPGSGQTSSP*VHVRPGGGKNDSGE Trigger: TTCCCCTGAGTCATTCTTTCCACCCCCTGGCCGCACGTGGACCCAAGGTGAGGAAGTCTGCCCTGAGCCAGGCTCTCGAGGTCCCGGCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS CCA 90 bp | AAGGGCGGGGTGGATGAATGGATGAGTGGGCGTGTAGGGAGTAGGTaGGTGGCGCAGCCCTACCTAGAAGCAGCTCCGCGGGAGGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: KGGVDEWMSGRVGSR*VAQPYLEAAPREEG Trigger: GCCCTCCTCCCGCGGAGCTGCTTCTAGGTAGGGCTGCGCCACCCACCTACTCCCTACACGCCCACTCATCCATTCATCCACCCCGCCCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS TCA 90 bp | TACCTAGAAGCAGCTCCGCGGGAGGAGGGCTCTGCTATTCTGCCCTaGTCTTCCTGCCTGTTCCCTCCGCTGCAGCCCCTTTCCCCGCCC | + |
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Preference number: 5 (lower is better) Translates to: YLEAAPREEGSAILP*SSCLFPPLQPLSPP Trigger: GGGCGGGGAAAGGGGCTGCAGCGGAGGGAACAGGCAGGAAGATCAGGGCAGAATAGCAGAGCCCTCCTCCCGCGGAGCTGCTTCTAGGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS GCA 90 bp | CTCGAGAGCCTGGCTCAGGGCAGACTTCCTCACCTTGGGTCCACGTaGGGCCAGGGGGTGGAAAGAATGACTCAGGGGAAGCGAGGCCCT | + |
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Preference number: 5 (lower is better) Translates to: LESLAQGRLPHLGST*GQGVERMTQGKRGP Trigger: AGGGCCTCGCTTCCCCTGAGTCATTCTTTCCACCCCCTGGCCGCACGTGGACCCAAGGTGAGGAAGTCTGCCCTGAGCCAGGCTCTCGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS GCA 90 bp | CCCCAGTCACAGCGGAGCCATCGCACACCTCTGTGCGCCTGTATTTaGGGCACCCTCTGCCAGGAATGCCTCTTCGCAGAGGCTCCCGTC | + |
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Preference number: 5 (lower is better) Translates to: PQSQRSHRTPLCACI*GTLCQECLFAEAPV Trigger: GACGGGAGCCTCTGCGAAGAGGCATTCCTGGCAGAGGGTGCCGCAAATACAGGCGCACAGAGGTGTGCGATGGCTCCGCTGTGACTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS GCA 90 bp | ACAGTCGGCAGTCCCCAGTCACAGCGGAGCCATCGCACACCTCTGTaGGCCTGTATTTGCGGCACCCTCTGCCAGGAATGCCTCTTCGCA | + |
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Preference number: 5 (lower is better) Translates to: TVGSPQSQRSHRTPL*ACICGTLCQECLFA Trigger: TGCGAAGAGGCATTCCTGGCAGAGGGTGCCGCAAATACAGGCGCACAGAGGTGTGCGATGGCTCCGCTGTGACTGGGGACTGCCGACTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS TCA 90 bp | GTGCGGCCAGGGGGTGGAAAGAATGACTCAGGGGAAGCGAGGCCCTaGATACCCGACCCAAAGACCATTTCCTGCATCCCAGCTCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: VRPGGGKNDSGEARP*IPDPKTISCIPAPS Trigger: GGAGGGAGCTGGGATGCAGGAAATGGTCTTTGGGTCGGGTATTCAGGGCCTCGCTTCCCCTGAGTCATTCTTTCCACCCCCTGGCCGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS GCA 90 bp | CGCACACCTCTGTGCGCCTGTATTTGCGGCACCCTCTGCCAGGAATaGCTCTTCGCAGAGGCTCCCGTCACACTTCTCATCCTCCAGCGA | + |
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Preference number: 5 (lower is better) Translates to: RTPLCACICGTLCQE*LFAEAPVTLLILQR Trigger: TCGCTGGAGGATGAGAAGTGTGACGGGAGCCTCTGCGAAGAGGCATTCCTGGCAGAGGGTGCCGCAAATACAGGCGCACAGAGGTGTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS GCA 90 bp | CGGAGCCATCGCACACCTCTGTGCGCCTGTATTTGCGGCACCCTCTaGCAGGAATGCCTCTTCGCAGAGGCTCCCGTCACACTTCTCATC | + |
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Preference number: 5 (lower is better) Translates to: RSHRTPLCACICGTL*QECLFAEAPVTLLI Trigger: GATGAGAAGTGTGACGGGAGCCTCTGCGAAGAGGCATTCCTGGCAGAGGGTGCCGCAAATACAGGCGCACAGAGGTGTGCGATGGCTCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS CCA 90 bp | AGAGAGGTCCCCCTGGATTGGCCTCAGCCAATTACATCCCGAGTCTaGGACCCAGCCCCACTGTCTTCCCGCTGGAGGCTGCAACGATTC | + |
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Preference number: 5 (lower is better) Translates to: REVPLDWPQPITSRV*DPAPLSSRWRLQRF Trigger: GAATCGTTGCAGCCTCCAGCGGGAAGACAGTGGGGCTGGGTCCCAGACTCGGGATGTAATTGGCTGAGGCCAATCCAGGGGGACCTCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000311308.6 ENST00000593586.1 |
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| CDS CCA 90 bp | CATCATCTGGGTGTCCCGGGGCAGCAGGTGACTTCCACACCTCCCTaGCTCACACCCCATTCTCCGAAGTATCCAGCAGCTCGCTCACAC | + |
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Preference number: 5 (lower is better) Translates to: HHLGVPGQQVTSTPP*LTPHSPKYPAARSH Trigger: GTGTGAGCGAGCTGCTGGATACTTCGGAGAATGGGGTGTGAGCCAGGGAGGTGTGGAAGTCACCTGCTGCCCCGGGACACCCAGATGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS TCA 90 bp | GACTTCCTCACCTTGGGTCCACGTGCGGCCAGGGGGTGGAAAGAATaGCTCAGGGGAAGCGAGGCCCTGAATACCCGACCCAAAGACCAT | + |
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Preference number: 5 (lower is better) Translates to: DFLTLGPRAARGWKE*LRGSEALNTRPKDH Trigger: ATGGTCTTTGGGTCGGGTATTCAGGGCCTCGCTTCCCCTGAGTCATTCTTTCCACCCCCTGGCCGCACGTGGACCCAAGGTGAGGAAGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS GCA 90 bp | CATCCCGAGTCTGGGACCCAGCCCCACTGTCTTCCCGCTGGAGGCTaGAACGATTCATCTTCAGCTGAGTCAGCTGGATGTAGCGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: HPESGTQPHCLPAGG*NDSSSAESAGCSGA Trigger: TGCTCCGCTACATCCAGCTGACTCAGCTGAAGATGAATCGTTGCAGCCTCCAGCGGGAAGACAGTGGGGCTGGGTCCCAGACTCGGGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311308.6 ENST00000593586.1 |
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| CDS CCA 90 bp | AAGTTACATGGTGAGGTGGGAGGGCGAGGGATAGAGAGGTCCCCCTaGATTGGCCTCAGCCAATTACATCCCGAGTCTGGGACCCAGCCC | + |
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Preference number: 5 (lower is better) Translates to: KLHGEVGGRGIERSP*IGLSQLHPESGTQP Trigger: GGGCTGGGTCCCAGACTCGGGATGTAATTGGCTGAGGCCAATCCAGGGGGACCTCTCTATCCCTCGCCCTCCCACCTCACCATGTAACTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000311308.6 ENST00000593586.1 |
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| CDS-3UTR CAA 90 bp | GACAAGTGTTTTACCAACAAACACATGAGTCGGGGGAAGTTACATGGTGAGGTGCGCTGGCCCTCTGCCTaGAACGCCACGGCGGCACGC | + |
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Preference number: 5 (lower is better) Translates to: DKCFTNKHMSRGKLHGEVRWPSA*NATAAR Trigger: GCGTGCCGCCGTGGCGTTCAAGGCAGAGGGCCAGCG...CACCTCACCATGTAACTTCCCCCGACTCATGTGTTTGTTGGTAAAACACTTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS-3UTR CAA 90 bp | GACAAGTGTTTTACCAACAAACACATGAGTCGGGGGAAGTTACATGGTGAGGTGAGCGCTCGGTGGTACTaGCCGATGGCCTCCCGGAAC | + |
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Preference number: 5 (lower is better) Translates to: DKCFTNKHMSRGKLHGEVSARWY*PMASRN Trigger: GTTCCGGGAGGCCATCGGCAAGTACCACCGAGCGCT...CACCTCACCATGTAACTTCCCCCGACTCATGTGTTTGTTGGTAAAACACTTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS GCA 90 bp | TCTTCGCAGAGGCTCCCGTCACACTTCTCATCCTCCAGCGACATCTaGAAGAAGTCTGTTCTCTCCGAGCCACTTAACAGGAAAACTAAT | + |
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Preference number: 5 (lower is better) Translates to: SSQRLPSHFSSSSDI*KKSVLSEPLNRKTN Trigger: ATTAGTTTTCCTGTTAAGTGGCTCGGAGAGAACAGACTTCTTGCAGATGTCGCTGGAGGATGAGAAGTGTGACGGGAGCCTCTGCGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS-3UTR CAA 90 bp | AAGTGTTTTACCAACAAACACATGAGTCGGGGGAAGTTACATGGTGAGGTGGGAAGAGGTCCCCCTGGATaGGCCTCAGCCAATTACATC | + |
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Preference number: 5 (lower is better) Translates to: KCFTNKHMSRGKLHGEVGRGPPG*ASANYI Trigger: GATGTAATTGGCTGAGGCCAATCCAGGGGGACCTCT...TCCCACCTCACCATGTAACTTCCCCCGACTCATGTGTTTGTTGGTAAAACACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS-3UTR CAA 90 bp | ATGATCACCAGTGACAAGTGTTTTACCAACAAACACATGAGTCGGGGGAAGTTATGCTTCTCCAGTACCTaGAGACAGTACTCGCGCACG | + |
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Preference number: 5 (lower is better) Translates to: MITSDKCFTNKHMSRGKLCFSST*RQYSRT Trigger: CGTGCGCGAGTACTGTCTCAAGGTACTGGAGAAGCA...TAACTTCCCCCGACTCATGTGTTTGTTGGTAAAACACTTGTCACTGGTGATCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS CCA 72 bp | GACGGCTCTGGGGTAGGACCGGGACGAGCCGAGCCATaGCGGGAGCCCGAGCCTGGGCCCGAGCCCGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: DGSGVGPGRAEP*REPEPGPEPGG Trigger: CCCACCGGGCTCGGGCCCAGGCTCGGGCTCCCGCCATGGCTCGGCTCGTCCCGGTCCTACCCCAGAGCCGTC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311308.6 ENST00000593586.1 |
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| CDS CCA 72 bp | GCTGTCGAGCGCCGCGCCCAGGCTCCCCGACGGCTCTaGGGTAGGACCGGGACGAGCCGAGCCATGGCGGGA | + |
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Preference number: 6 (lower is better) Translates to: AVERRAQAPRRL*GRTGTSRAMAG Trigger: TCCCGCCATGGCTCGGCTCGTCCCGGTCCTACCCCAGAGCCGTCGGGGAGCCTGGGCGCGGCGCTCGACAGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311308.6 ENST00000593586.1 |
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| CDS GCA 72 bp | AGGCCGCTAGGGCGGGCCCCCTGCGCCGCCTTCAGCTaGAGCAGCGCTCGGTGGTACTTGCCGATGGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: RPLGRAPCAAFS*SSARWYLPMAS Trigger: GGAGGCCATCGGCAAGTACCACCGAGCGCTGCTGCAGCTGAAGGCGGCGCAGGGGGCCCGCCCTAGCGGCCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000311308.6 ENST00000593586.1 |
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| CDS CCA 72 bp | CCCCGCGCGGGGGCGAGGGCCGGGACCTCGAGAGCCTaGCTCAGGGCAGACTTCCTCACCTTGGGTCCACGT | + |
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Preference number: 6 (lower is better) Translates to: PRAGARAGTSRA*LRADFLTLGPR Trigger: ACGTGGACCCAAGGTGAGGAAGTCTGCCCTGAGCCAGGCTCTCGAGGTCCCGGCCCTCGCCCCCGCGCGGGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS CCA 72 bp | TGCGAGGGCCCCGCGGCCGGCACTCTCAGAGCCTGCTaGCACCCCCAGAACCCACCTGACTGCGAGGAGCCG | + |
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Preference number: 6 (lower is better) Translates to: CEGPAAGTLRAC*HPQNPPDCEEP Trigger: CGGCTCCTCGCAGTCAGGTGGGTTCTGGGGGTGCCAGCAGGCTCTGAGAGTGCCGGCCGCGGGGCCCTCGCA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS CAA 72 bp | CGAGGCTCCAGGCGGCAGGGAACCAGGCCTAAGGGATaGCTCCGGCAACCAGGGGCGCCAATCCGCTCGCCT | + |
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Preference number: 6 (lower is better) Translates to: RGSRRQGTRPKG*LRQPGAPIRSP Trigger: AGGCGAGCGGATTGGCGCCCCTGGTTGCCGGAGCAATCCCTTAGGCCTGGTTCCCTGCCGCCTGGAGCCTCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS GCA 72 bp | TGTAGCGGAGCACATTGGTGTCTGTGGGTTCCCGGCTaGGGGCCTCCTGCAGGTAGCGCAGCGCGCGTGCGT | + |
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Preference number: 6 (lower is better) Translates to: CSGAHWCLWVPG*GPPAGSAARVR Trigger: ACGCACGCGCGCTGCGCTACCTGCAGGAGGCCCGCAGCCGGGAACCCACAGACACCAATGTGCTCCGCTACA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311308.6 |
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| CDS GCA 72 bp | GAGGCTCCAGGCGGCAGGGAACCAGGCCTAAGGGATTaGTCCGGCAACCAGGGGCGCCAATCCGCTCGCCTA | + |
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Preference number: 6 (lower is better) Translates to: EAPGGREPGLRD*SGNQGRQSARL Trigger: TAGGCGAGCGGATTGGCGCCCCTGGTTGCCGGAGCAATCCCTTAGGCCTGGTTCCCTGCCGCCTGGAGCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS CCA 72 bp | GCTGCTAGGGGGCGCCAAAACACGGACAGGCGCCACTaGGCGATCCACCCAGAGCTGTCGGTGGGCAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: AARGRQNTDRRH*AIHPELSVGKS Trigger: GCTCTTGCCCACCGACAGCTCTGGGTGGATCGCCCAGTGGCGCCTGTCCGTGTTTTGGCGCCCCCTAGCAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS CAA 90 bp | GCGAGGAGCCGAGGCTCCAGGCGGCAGGGAACCAGGCCTAAGGGATaGCTCCGGCAACCAGGGGCGCCAATCCGCTCGCCTATCGAAACA | + |
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Preference number: 6 (lower is better) Translates to: ARSRGSRRQGTRPKG*LRQPGAPIRSPIET Trigger: TGTTTCGATAGGCGAGCGGATTGGCGCCCCTGGTTGCCGGAGCAATCCCTTAGGCCTGGTTCCCTGCCGCCTGGAGCCTCGGCTCCTCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS GCA 72 bp | GGCGCCAATCCGCTCGCCTATCGAAACAGGCGCAACTaGGCCGCTGCTAGGGGGCGCCAAAACACGGACAGG | + |
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Preference number: 6 (lower is better) Translates to: GANPLAYRNRRN*AAARGRQNTDR Trigger: CCTGTCCGTGTTTTGGCGCCCCCTAGCAGCGGCGCAGTTGCGCCTGTTTCGATAGGCGAGCGGATTGGCGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS TCA 72 bp | ACTTCTTCTCTCGATAGCAGCGCTGGCCCTCTGCCTTaGACGCCACGGCGGCACGCAGGCTGCTGTCGAGCG | + |
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Preference number: 6 (lower is better) Translates to: TSSLDSSAGPLP*TPRRHAGCCRA Trigger: CGCTCGACAGCAGCCTGCGTGCCGCCGTGGCGTTCAAGGCAGAGGGCCAGCGCTGCTATCGAGAGAAGAAGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000311308.6 ENST00000593586.1 |
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| CDS TCA 72 bp | ACCTTGGGTCCACGTGCGGCCAGGGGGTGGAAAGAATaGCTCAGGGGAAGCGAGGCCCTGAATACCCGACCC | + |
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Preference number: 6 (lower is better) Translates to: TLGPRAARGWKE*LRGSEALNTRP Trigger: GGGTCGGGTATTCAGGGCCTCGCTTCCCCTGAGTCATTCTTTCCACCCCCTGGCCGCACGTGGACCCAAGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS GCA 72 bp | GCGCCGCCTTCAGCTGCAGCAGCGCTCGGTGGTACTTaGCGATGGCCTCCCGGAACTTCTTCTCTCGATAGC | + |
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Preference number: 6 (lower is better) Translates to: APPSAAAALGGT*RWPPGTSSLDS Trigger: GCTATCGAGAGAAGAAGTTCCGGGAGGCCATCGGCAAGTACCACCGAGCGCTGCTGCAGCTGAAGGCGGCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000311308.6 ENST00000593586.1 |
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| CDS CCA 72 bp | CCCCTGGATTGGCCTCAGCCAATTACATCCCGAGTCTaGGACCCAGCCCCACTGTCTTCCCGCTGGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PLDWPQPITSRV*DPAPLSSRWRL Trigger: CAGCCTCCAGCGGGAAGACAGTGGGGCTGGGTCCCAGACTCGGGATGTAATTGGCTGAGGCCAATCCAGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000311308.6 ENST00000593586.1 |
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| CDS CCA 72 bp | CCTCGAGAGCCTGGCTCAGGGCAGACTTCCTCACCTTaGGTCCACGTGCGGCCAGGGGGTGGAAAGAATGAC | + |
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Preference number: 6 (lower is better) Translates to: PREPGSGQTSSP*VHVRPGGGKND Trigger: GTCATTCTTTCCACCCCCTGGCCGCACGTGGACCCAAGGTGAGGAAGTCTGCCCTGAGCCAGGCTCTCGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS CAA 90 bp | TCCCCAGTCACAGCGGAGCCATCGCACACCTCTGTGCGCCTGTATTaGCGGCACCCTCTGCCAGGAATGCCTCTTCGCAGAGGCTCCCGT | + |
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Preference number: 6 (lower is better) Translates to: SPVTAEPSHTSVRLY*RHPLPGMPLRRGSR Trigger: ACGGGAGCCTCTGCGAAGAGGCATTCCTGGCAGAGGGTGCCGCAAATACAGGCGCACAGAGGTGTGCGATGGCTCCGCTGTGACTGGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS GCA 72 bp | CAGCGGAGCCATCGCACACCTCTGTGCGCCTGTATTTaGGGCACCCTCTGCCAGGAATGCCTCTTCGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: QRSHRTPLCACI*GTLCQECLFAE Trigger: CTCTGCGAAGAGGCATTCCTGGCAGAGGGTGCCGCAAATACAGGCGCACAGAGGTGTGCGATGGCTCCGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS CCA 72 bp | GGTGGGAGGGCGAGGGATAGAGAGGTCCCCCTGGATTaGCCTCAGCCAATTACATCCCGAGTCTGGGACCCA | + |
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Preference number: 6 (lower is better) Translates to: GGRARDREVPLD*PQPITSRVWDP Trigger: TGGGTCCCAGACTCGGGATGTAATTGGCTGAGGCCAATCCAGGGGGACCTCTCTATCCCTCGCCCTCCCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000311308.6 ENST00000593586.1 |
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| CDS CCA 72 bp | GGTGAGGTGGGAGGGCGAGGGATAGAGAGGTCCCCCTaGATTGGCCTCAGCCAATTACATCCCGAGTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GEVGGRGIERSP*IGLSQLHPESG Trigger: CCCAGACTCGGGATGTAATTGGCTGAGGCCAATCCAGGGGGACCTCTCTATCCCTCGCCCTCCCACCTCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000311308.6 ENST00000593586.1 |
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| CDS CCA 72 bp | GTGGATGAATGGATGAGTGGGCGTGTAGGGAGTAGGTaGGTGGCGCAGCCCTACCTAGAAGCAGCTCCGCGG | + |
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Preference number: 6 (lower is better) Translates to: VDEWMSGRVGSR*VAQPYLEAAPR Trigger: CCGCGGAGCTGCTTCTAGGTAGGGCTGCGCCACCCACCTACTCCCTACACGCCCACTCATCCATTCATCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS CCA 72 bp | GGTGTCCCGGGGCAGCAGGTGACTTCCACACCTCCCTaGCTCACACCCCATTCTCCGAAGTATCCAGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: GVPGQQVTSTPP*LTPHSPKYPAA Trigger: AGCTGCTGGATACTTCGGAGAATGGGGTGTGAGCCAGGGAGGTGTGGAAGTCACCTGCTGCCCCGGGACACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS CCA 72 bp | CCTTCAGCTGCAGCAGCGCTCGGTGGTACTTGCCGATaGCCTCCCGGAACTTCTTCTCTCGATAGCAGCGCT | + |
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Preference number: 6 (lower is better) Translates to: PSAAAALGGTCR*PPGTSSLDSSA Trigger: AGCGCTGCTATCGAGAGAAGAAGTTCCGGGAGGCCATCGGCAAGTACCACCGAGCGCTGCTGCAGCTGAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000311308.6 ENST00000593586.1 |
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| CDS CAA 72 bp | ACAGCGGAGCCATCGCACACCTCTGTGCGCCTGTATTaGCGGCACCCTCTGCCAGGAATGCCTCTTCGCAGA | + |
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Preference number: 6 (lower is better) Translates to: TAEPSHTSVRLY*RHPLPGMPLRR Trigger: TCTGCGAAGAGGCATTCCTGGCAGAGGGTGCCGCAAATACAGGCGCACAGAGGTGTGCGATGGCTCCGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS GCA 72 bp | CTGTGCGCCTGTATTTGCGGCACCCTCTGCCAGGAATaGCTCTTCGCAGAGGCTCCCGTCACACTTCTCATC | + |
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Preference number: 6 (lower is better) Translates to: LCACICGTLCQE*LFAEAPVTLLI Trigger: GATGAGAAGTGTGACGGGAGCCTCTGCGAAGAGGCATTCCTGGCAGAGGGTGCCGCAAATACAGGCGCACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS GCA 72 bp | TCTGGGACCCAGCCCCACTGTCTTCCCGCTGGAGGCTaGAACGATTCATCTTCAGCTGAGTCAGCTGGATGT | + |
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Preference number: 6 (lower is better) Translates to: SGTQPHCLPAGG*NDSSSAESAGC Trigger: ACATCCAGCTGACTCAGCTGAAGATGAATCGTTGCAGCCTCCAGCGGGAAGACAGTGGGGCTGGGTCCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311308.6 ENST00000593586.1 |
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| CDS TCA 72 bp | GGGGGTGGAAAGAATGACTCAGGGGAAGCGAGGCCCTaGATACCCGACCCAAAGACCATTTCCTGCATCCCA | + |
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Preference number: 6 (lower is better) Translates to: GGGKNDSGEARP*IPDPKTISCIP Trigger: TGGGATGCAGGAAATGGTCTTTGGGTCGGGTATTCAGGGCCTCGCTTCCCCTGAGTCATTCTTTCCACCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS GCA 72 bp | AGGCTCCCGTCACACTTCTCATCCTCCAGCGACATCTaGAAGAAGTCTGTTCTCTCCGAGCCACTTAACAGG | + |
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Preference number: 6 (lower is better) Translates to: RLPSHFSSSSDI*KKSVLSEPLNR Trigger: CCTGTTAAGTGGCTCGGAGAGAACAGACTTCTTGCAGATGTCGCTGGAGGATGAGAAGTGTGACGGGAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS CCA 72 bp | GAGATATCAGATGTGGCAATGACGGTAGATGAGAAATaGCCGGGGAGATGTCAGAGGAGCGATAGGTGGACG | + |
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Preference number: 6 (lower is better) Translates to: EISDVAMTVDEK*PGRCQRSDRWT Trigger: CGTCCACCTATCGCTCCTCTGACATCTCCCCGGCCATTTCTCATCTACCGTCATTGCCACATCTGATATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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| CDS GCA 72 bp | ACAGGAAAACTAATCTCGTCTCGGCTCCCACAACCCTaGACCTGTTGTAATCCCTCTTCCTTCTTCATTGGC | + |
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Preference number: 6 (lower is better) Translates to: TGKLISSRLPQP*TCCNPSSFFIG Trigger: GCCAATGAAGAAGGAAGAGGGATTACAACAGGTGCAGGGTTGTGGGAGCCGAGACGAGATTAGTTTTCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593586.1 |
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