RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTC7B (Homo sapiens)

Ensembl gene IDs: ENSG00000165914

Ensembl transcript IDs: ENST00000328459.11, ENST00000553948.1, ENST00000553972.5, ENST00000554462.1, ENST00000554654.5, ENST00000555005.5, ENST00000555239.5, ENST00000555894.5, ENST00000556490.5, ENST00000556749.1, ENST00000556960.1, ENST00000557059.1, ENST00000557187.1, ENST00000557292.1, ENST00000557766.1

Found 1082 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTGCCTTGGTGGCCCAGCCTCCTCCCTTCCTGGTCCTGATCCAGTaGGCCTTGCCCCACGCTCCCGCATGGGATGGCAGAGCCCAGCCC +
Preference number: 1 (lower is better)
Translates to: SALVAQPPPFLVLIQ*ALPHAPAWDGRAQP
Trigger: GGGCTGGGCTCTGCCATCCCATGCGGGAGCGTGGGGCAAGGCCCACTGGATCAGGACCAGGAAGGGAGGAGGCTGGGCCACCAAGGCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 90 bp CAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTaGCCGGCAGGGCCTCTGAGGCCTGAGCGGCAGGTGAGGCTGGCA +
Preference number: 1 (lower is better)
Translates to: QCGRFIPLGRWHKPW*PAGPLRPERQVRLA
Trigger: TGCCAGCCTCACCTGCCGCTCAGGCCTCAGAGGCCCTGCCGGGCACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
3UTR CCA 90 bp CCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTaGTGCCCGGCAGGGCCTCTGAGGCCTGAGCGGCAGGTGAGGCTG +
Preference number: 1 (lower is better)
Translates to: PQCGRFIPLGRWHKP*CPAGPLRPERQVRL
Trigger: CAGCCTCACCTGCCGCTCAGGCCTCAGAGGCCCTGCCGGGCACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
3UTR CCA 90 bp CCTGGTCCTGATCCAGTGGGCCTTGCCCCACGCTCCCGCATGGGATaGCAGAGCCCAGCCCTGTGCCTCCAATCAGGGCAAGCTGCCACC +
Preference number: 1 (lower is better)
Translates to: PGPDPVGLAPRSRMG*QSPALCLQSGQAAT
Trigger: GGTGGCAGCTTGCCCTGATTGGAGGCACAGGGCTGGGCTCTGCCATCCCATGCGGGAGCGTGGGGCAAGGCCCACTGGATCAGGACCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp GGCCCACAACCCGAGCCCTTGGGCCACAGGCACCGCCTCAGGCAGTaGCGGATGGGAGCCTCCTGTGCTGTGACCAAGTGGGACAGGGAT +
Preference number: 1 (lower is better)
Translates to: GPQPEPLGHRHRLRQ*RMGASCAVTKWDRD
Trigger: ATCCCTGTCCCACTTGGTCACAGCACAGGAGGCTCCCATCCGCCACTGCCTGAGGCGGTGCCTGTGGCCCAAGGGCTCGGGTTGTGGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 90 bp CCAACCTGCACACCACCAGGCCCACGGTCAGCTCTCAGGCCACCCTaGCGGGGTCTCCAGGCATTGAGAGAGCCCACCCACCTCCTCCAG +
Preference number: 1 (lower is better)
Translates to: PTCTPPGPRSALRPP*RGLQALREPTHLLQ
Trigger: CTGGAGGAGGTGGGTGGGCTCTCTCAATGCCTGGAGACCCCGTCAGGGTGGCCTGAGAGCTGACCGTGGGCCTGGTGGTGTGCAGGTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 90 bp GCCACTTCCTCCACGCCCCTTGGTCTAAGCACCATGGTCGCTGTGTaGCAGCAGGAGCCTGACAGCCTCCCAGCTCCCACGCTGCGGCCT +
Preference number: 1 (lower is better)
Translates to: ATSSTPLGLSTMVAV*QQEPDSLPAPTLRP
Trigger: AGGCCGCAGCGTGGGAGCTGGGAGGCTGTCAGGCTCCTGCTGTCACACAGCGACCATGGTGCTTAGACCAAGGGGCGTGGAGGAAGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 90 bp CGGATGGGAGCCTCCTGTGCTGTGACCAAGTGGGACAGGGATGCATaGCCCTCCTCAGGCCTTGGCTGGACCCAGGGCCCGAGGATGACC +
Preference number: 1 (lower is better)
Translates to: RMGASCAVTKWDRDA*PSSGLGWTQGPRMT
Trigger: GGTCATCCTCGGGCCCTGGGTCCAGCCAAGGCCTGAGGAGGGTCATGCATCCCTGTCCCACTTGGTCACAGCACAGGAGGCTCCCATCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 90 bp GGGTGGCCCGGATGGTCAGCGGGAGCTGCTGGCTCCAGGCAGACCTaGAGAAGATCCCCCACCACCTTCCTGCCACCTCTCCATAGTCAG +
Preference number: 1 (lower is better)
Translates to: GWPGWSAGAAGSRQT*RRSPTTFLPPLHSQ
Trigger: CTGACTATGGAGAGGTGGCAGGAAGGTGGTGGGGGATCTTCTGCAGGTCTGCCTGGAGCCAGCAGCTCCCGCTGACCATCCGGGCCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 90 bp ACTCGGACTCTGCCTCAGCTGCAGCTAGCTCTGCCCTTCCTGCCCTaGTTCAGGGACCCCTCAGCACGTCCCAGCAGCCACTCACCCCTC +
Preference number: 1 (lower is better)
Translates to: TRTLPQLQLALPFLP*FRDPSARPSSHSPL
Trigger: GAGGGGTGAGTGGCTGCTGGGACGTGCTGAGGGGTCCCTGAAGCAGGGCAGGAAGGGCAGAGCTAGCTGCAGCTGAGGCAGAGTCCGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 90 bp GTGGCGGATGGGAGCCTCCTGTGCTGTGACCAAGTGGGACAGGGATaGATGACCCTCCTCAGGCCTTGGCTGGACCCAGGGCCCGAGGAT +
Preference number: 1 (lower is better)
Translates to: VADGSLLCCDQVGQG*MTLLRPWLDPGPED
Trigger: ATCCTCGGGCCCTGGGTCCAGCCAAGGCCTGAGGAGGGTCATGCATCCCTGTCCCACTTGGTCACAGCACAGGAGGCTCCCATCCGCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp CCCGAGGATGACCCTGTGGGGTCAAGGAGGCAAAGACAAGAGTGGTaGCGGTCACAGAGGCCCCCAGCCATGCCCATGCTGACCAGGCCC +
Preference number: 1 (lower is better)
Translates to: PEDDPVGSRRQRQEW*RSQRPPAMPMLTRP
Trigger: GGGCCTGGTCAGCATGGGCATGGCTGGGGGCCTCTGTGACCGCCACCACTCTTGTCTTTGCCTCCTTGACCCCACAGGGTCATCCTCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp CCCTCCTCAGGCCTTGGCTGGACCCAGGGCCCGAGGATGACCCTGTaGGGTCAAGGAGGCAAAGACAAGAGTGGTGGCGGTCACAGAGGC +
Preference number: 1 (lower is better)
Translates to: PSSGLGWTQGPRMTL*GQGGKDKSGGGHRG
Trigger: GCCTCTGTGACCGCCACCACTCTTGTCTTTGCCTCCTTGACCCCACAGGGTCATCCTCGGGCCCTGGGTCCAGCCAAGGCCTGAGGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 90 bp GGTGAGGGCCTGGCAGAGAAGGTCTGGTACAGCGCCTGCACCATCTaGCTTGGTGGCCCAGCCTCCTCCCTTCCTGGTCCTGATCCAGTG +
Preference number: 1 (lower is better)
Translates to: GEGLAEKVWYSACTI*LGGPASSLPGPDPV
Trigger: CACTGGATCAGGACCAGGAAGGGAGGAGGCTGGGCCACCAAGGCAGATGGTGCAGGCGCTGTACCAGACCTTCTCTGCCAGGCCCTCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 90 bp CCTCCCAGCTCCCACGCTGCGGCCTGCAGAATAACGTGCTCCCCCTaGCCCTCAAAGACGTCCACATCCCGAGCCCTGGAACCTGTGACT +
Preference number: 1 (lower is better)
Translates to: PPSSHAAACRITCSP*PSKTSTSRALEPVT
Trigger: AGTCACAGGTTCCAGGGCTCGGGATGTGGACGTCTTTGAGGGGCAGGGGGAGCACGTTATTCTGCAGGCCGCAGCGTGGGAGCTGGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 90 bp TCGCTGTGTGACAGCAGGAGCCTGACAGCCTCCCAGCTCCCACGCTaGGGCCTGCAGAATAACGTGCTCCCCCTGCCCCTCAAAGACGTC +
Preference number: 1 (lower is better)
Translates to: SLCDSRSLTASQLPR*GLQNNVLPLPLKDV
Trigger: GACGTCTTTGAGGGGCAGGGGGAGCACGTTATTCTGCAGGCCGCAGCGTGGGAGCTGGGAGGCTGTCAGGCTCCTGCTGTCACACAGCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 90 bp ACTGCTGAATGGCAGGCTAAGCTCAGGCTGGAAACCCTGACCTCCTaGCATGCCCGGGGGAGGAGCCATGCAGGGGTAGGGCTGGGCTGT +
Preference number: 1 (lower is better)
Translates to: TAEWQAKLRLETLTS*HARGRSHAGVGLGC
Trigger: ACAGCCCAGCCCTACCCCTGCATGGCTCCTCCCCCGGGCATGGCAGGAGGTCAGGGTTTCCAGCCTGAGCTTAGCCTGCCATTCAGCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp TGGAAGGAGGCAGAGAGACAGACAGACGAGCCCATGGATCCCAAATaGGGCTGGGGATGGGAAGTGGCCTGCCCCGGCCACACCTGCCCA +
Preference number: 1 (lower is better)
Translates to: WKEAERQTDEPMDPK*GWGWEVACPGHTCP
Trigger: TGGGCAGGTGTGGCCGGGGCAGGCCACTTCCCATCCCCAGCCCCATTTGGGATCCATGGGCTCGTCTGTCTGTCTCTCTGCCTCCTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp ACTGTGTGGCCGCCGGGGAGATGCGTGGGGCCATCTGGAGGAGTCTaGGTTGCTCCATGTGATCACAGACACGCCCACCTGTGCACGAGC +
Preference number: 1 (lower is better)
Translates to: TVWPPGRCVGPSGGV*VAPCDHRHAHLCTS
Trigger: GCTCGTGCACAGGTGGGCGTGTCTGTGATCACATGGAGCAACCCAGACTCCTCCAGATGGCCCCACGCATCTCCCCGGCGGCCACACAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp GGACTTCCTGCAGGCAGAGAGTCTGGGCCCGCAATGATGACTGTGTaGCCGCCGGGGAGATGCGTGGGGCCATCTGGAGGAGTCTGGGTT +
Preference number: 1 (lower is better)
Translates to: GLPAGRESGPAMMTV*PPGRCVGPSGGVWV
Trigger: AACCCAGACTCCTCCAGATGGCCCCACGCATCTCCCCGGCGGCCACACAGTCATCATTGCGGGCCCAGACTCTCTGCCTGCAGGAAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp TGCTGTGACCAAGTGGGACAGGGATGCATGACCCTCCTCAGGCCTTaGCTGGACCCAGGGCCCGAGGATGACCCTGTGGGGTCAAGGAGG +
Preference number: 1 (lower is better)
Translates to: CCDQVGQGCMTLLRP*LDPGPEDDPVGSRR
Trigger: CCTCCTTGACCCCACAGGGTCATCCTCGGGCCCTGGGTCCAGCCAAGGCCTGAGGAGGGTCATGCATCCCTGTCCCACTTGGTCACAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp ACACCGTGGCTGAACACAGGCAGGAAGGCCTCACTGCCACCTGGGTaGGTGGAGGTTCAGGCTGGGCTGGGTGCTCAGGAAGCCTCCATG +
Preference number: 1 (lower is better)
Translates to: TPWLNTGRKASLPPG*VEVQAGLGAQEASM
Trigger: CATGGAGGCTTCCTGAGCACCCAGCCCAGCCTGAACCTCCACCCACCCAGGTGGCAGTGAGGCCTTCCTGCCTGTGTTCAGCCACGGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 90 bp GCCCCTTGGTCTAAGCACCATGGTCGCTGTGTGACAGCAGGAGCCTaGCAGCCTCCCAGCTCCCACGCTGCGGCCTGCAGAATAACGTGC +
Preference number: 1 (lower is better)
Translates to: APWSKHHGRCVTAGA*QPPSSHAAACRITC
Trigger: GCACGTTATTCTGCAGGCCGCAGCGTGGGAGCTGGGAGGCTGTCAGGCTCCTGCTGTCACACAGCGACCATGGTGCTTAGACCAAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 90 bp ATGCATGACCCTCCTCAGGCCTTGGCTGGACCCAGGGCCCGAGGATaGCCCTGTGGGGTCAAGGAGGCAAAGACAAGAGTGGTGGCGGTC +
Preference number: 1 (lower is better)
Translates to: MHDPPQALAGPRARG*PCGVKEAKTRVVAV
Trigger: GACCGCCACCACTCTTGTCTTTGCCTCCTTGACCCCACAGGGTCATCCTCGGGCCCTGGGTCCAGCCAAGGCCTGAGGAGGGTCATGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 90 bp GAAGGATCAGGGCCAGTCGCTGCATGCTCTTCACGTGGGTGGGGCTaGTGGCTAAGGCCTCTTCATACCACCGCCGCGCCTCGTCCATGC +
Preference number: 1 (lower is better)
Translates to: EGSGPVAACSSRGWG*WLRPLHTTAAPRPC
Trigger: GCATGGACGAGGCGCGGCGGTGGTATGAAGAGGCCTTAGCCATCAGCCCCACCCACGTGAAGAGCATGCAGCGACTGGCCCTGATCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR GCA 90 bp GGAGGAGTCTGGGTTGCTCCATGTGATCACAGACACGCCCACCTGTaGACGAGCATGCACCTCCCCCAGGCCATGACCACAGGTAGGGGG +
Preference number: 1 (lower is better)
Translates to: GGVWVAPCDHRHAHL*TSMHLPQAMTTGRG
Trigger: CCCCCTACCTGTGGTCATGGCCTGGGGGAGGTGCATGCTCGTGCACAGGTGGGCGTGTCTGTGATCACATGGAGCAACCCAGACTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 90 bp AGCGTCATCCAGGGGTGCAGCGGGCCCTGCTTAGGGGCACTGCTCTaGAGAGACGAAGCCACTTCCGACAGTGCCTGCTCCACTCTTGAG +
Preference number: 1 (lower is better)
Translates to: SVIQGCSGPCLGALL*RDEATSDSACSTLE
Trigger: CTCAAGAGTGGAGCAGGCACTGTCGGAAGTGGCTTCGTCTCTGCAGAGCAGTGCCCCTAAGCAGGGCCCGCTGCACCCCTGGATGACGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR CCA 90 bp CGCCCTGCAGGGCTGATACGCACAGGAGTCTCTGAGGTGAGGGCCTaGCAGAGAAGGTCTGGTACAGCGCCTGCACCATCTGCCTTGGTG +
Preference number: 1 (lower is better)
Translates to: RPAGLIRTGVSEVRA*QRRSGTAPAPSALV
Trigger: CACCAAGGCAGATGGTGCAGGCGCTGTACCAGACCTTCTCTGCCAGGCCCTCACCTCAGAGACTCCTGTGCGTATCAGCCCTGCAGGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp AGCTCAGCCCTGACCTCTTCCTCTTTGTCTATGCTTGTCCCGAAGTaGCCCCGTCAGGCCCATGGCTCCCAGCCCCGCATCCCTGACACC +
Preference number: 1 (lower is better)
Translates to: SSALTSSSLSMLVPK*PRQAHGSQPRIPDT
Trigger: GGTGTCAGGGATGCGGGGCTGGGAGCCATGGGCCTGACGGGGCCACTTCGGGACAAGCATAGACAAAGAGGAAGAGGTCAGGGCTGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp GGAAGGCCTCACTGCCACCTGGGTGGGTGGAGGTTCAGGCTGGGCTaGGTGCTCAGGAAGCCTCCATGGGCTTGGGGAGGTCATTTTCCT +
Preference number: 1 (lower is better)
Translates to: GRPHCHLGGWRFRLG*VLRKPPWAWGGHFP
Trigger: AGGAAAATGACCTCCCCAAGCCCATGGAGGCTTCCTGAGCACCCAGCCCAGCCTGAACCTCCACCCACCCAGGTGGCAGTGAGGCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 90 bp AGAGAGTCTGGGCCCGCAATGATGACTGTGTGGCCGCCGGGGAGATaGGTGGGGCCATCTGGAGGAGTCTGGGTTGCTCCATGTGATCAC +
Preference number: 1 (lower is better)
Translates to: RESGPAMMTVWPPGR*VGPSGGVWVAPCDH
Trigger: GTGATCACATGGAGCAACCCAGACTCCTCCAGATGGCCCCACGCATCTCCCCGGCGGCCACACAGTCATCATTGCGGGCCCAGACTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp GTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTaGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGCCC +
Preference number: 1 (lower is better)
Translates to: VGSLWPTEHSSLASV*QIHPLGAMAQALVP
Trigger: GGGCACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
3UTR CCA 90 bp GGTGTCCCCTCACTGGGCAATGCCCACCCTGTCGGCCTTGAGAGGTaGTGGGGGAGGAGCAGGAATGAGAAGGTGGCGATATGGAGAGAG +
Preference number: 1 (lower is better)
Translates to: GVPSLGNAHPVGLER*WGRSRNEKVAIWRE
Trigger: CTCTCTCCATATCGCCACCTTCTCATTCCTGCTCCTCCCCCACCACCTCTCAAGGCCGACAGGGTGGGCATTGCCCAGTGAGGGGACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp GGTGGGTGGAGGTTCAGGCTGGGCTGGGTGCTCAGGAAGCCTCCATaGGCTTGGGGAGGTCATTTTCCTGGTAGCTGTGCCTTCCTGGGT +
Preference number: 1 (lower is better)
Translates to: GGWRFRLGWVLRKPP*AWGGHFPGSCAFLG
Trigger: ACCCAGGAAGGCACAGCTACCAGGAAAATGACCTCCCCAAGCCCATGGAGGCTTCCTGAGCACCCAGCCCAGCCTGAACCTCCACCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 90 bp GCTGGAGGGCTCTGGTTGTTAAGGCTGGGCCCATGTGTCCATCCTTaGGCCATGTGGGTGGAGAGTGGGGGTGGTTCCCTGAGGGAGATG +
Preference number: 1 (lower is better)
Translates to: AGGLWLLRLGPCVHP*AMWVESGGGSLREM
Trigger: CATCTCCCTCAGGGAACCACCCCCACTCTCCACCCACATGGCTCAAGGATGGACACATGGGCCCAGCCTTAACAACCAGAGCCCTCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp GCAGCAGGAAAGAGCGACAGCCTTCTCTGTGGCTCCCGCTCTGACTaGACCGCTTTAGGTCACATGCTCACTCCTGACCCTCTGTGGCCC +
Preference number: 1 (lower is better)
Translates to: AAGKSDSLLCGSRSD*TALGHMLTPDPLWP
Trigger: GGGCCACAGAGGGTCAGGAGTGAGCATGTGACCTAAAGCGGTCCAGTCAGAGCGGGAGCCACAGAGAAGGCTGTCGCTCTTTCCTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp GGGCCCATGTGTCCATCCTTGAGCCATGTGGGTGGAGAGTGGGGGTaGTTCCCTGAGGGAGATGAAGACAATGGAGAGGTGCCGGGCAGA +
Preference number: 1 (lower is better)
Translates to: GPMCPSLSHVGGEWG*FPEGDEDNGEVPGR
Trigger: TCTGCCCGGCACCTCTCCATTGTCTTCATCTCCCTCAGGGAACCACCCCCACTCTCCACCCACATGGCTCAAGGATGGACACATGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 90 bp AGCCCGCCTGCCTCAGTGAGCCAGAGAGGTCGTGCCCAGTTTGAATaGAGTCCTCTAGGCTTCAGGGCACCTAAGTTCAGAGCTCAGCCC +
Preference number: 1 (lower is better)
Translates to: SPPASVSQRGRAQFE*SPLGFRAPKFRAQP
Trigger: GGGCTGAGCTCTGAACTTAGGTGCCCTGAAGCCTAGAGGACTGCATTCAAACTGGGCACGACCTCTCTGGCTCACTGAGGCAGGCGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 90 bp GAGGACTCCGGCCAGGCCTCAAAGGCTTATGGTCAAGTGTGTGGCTaGTTCTGGAGTAGGCAGGATGGACAGGGCAAGCAGACGCTAGGG +
Preference number: 1 (lower is better)
Translates to: EDSGQASKAYGQVCG*FWSRQDGQGKQTLG
Trigger: CCCTAGCGTCTGCTTGCCCTGTCCATCCTGCCTACTCCAGAAGCAGCCACACACTTGACCATAAGCCTTTGAGGCCTGGCCGGAGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 90 bp TTAGGGGCACTGCTCTGCAGAGACGAAGCCACTTCCGACAGTGCCTaGTCCACTCTTGAGGCTGCTACCGATGTGGCATGGACGGAGCCT +
Preference number: 1 (lower is better)
Translates to: LGALLCRDEATSDSA*STLEAATDVAWTEP
Trigger: AGGCTCCGTCCATGCCACATCGGTAGCAGCCTCAAGAGTGGAGCAGGCACTGTCGGAAGTGGCTTCGTCTCTGCAGAGCAGTGCCCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR CCA 90 bp AAGGCTGGGCCCATGTGTCCATCCTTGAGCCATGTGGGTGGAGAGTaGGGGTGGTTCCCTGAGGGAGATGAAGACAATGGAGAGGTGCCG +
Preference number: 1 (lower is better)
Translates to: KAGPMCPSLSHVGGE*GWFPEGDEDNGEVP
Trigger: CGGCACCTCTCCATTGTCTTCATCTCCCTCAGGGAACCACCCCCACTCTCCACCCACATGGCTCAAGGATGGACACATGGGCCCAGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp GAGACAGAGTGCTTCCCCATCAGAGGTGACACGGCCAGGCAGAACTaGGATTCCAGCCAGATCTGTGTGACCCACAGCCCAGTGGTCACC +
Preference number: 1 (lower is better)
Translates to: ETECFPIRGDTARQN*DSSQICVTHSPVVT
Trigger: GGTGACCACTGGGCTGTGGGTCACACAGATCTGGCTGGAATCCCAGTTCTGCCTGGCCGTGTCACCTCTGATGGGGAAGCACTCTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 90 bp GAGGTGACACGGCCAGGCAGAACTGGGATTCCAGCCAGATCTGTGTaGCCCACAGCCCAGTGGTCACCAGGAAACCCTATTGTCCTCAGG +
Preference number: 1 (lower is better)
Translates to: EVTRPGRTGIPARSV*PTAQWSPGNPIVLR
Trigger: CCTGAGGACAATAGGGTTTCCTGGTGACCACTGGGCTGTGGGTCACACAGATCTGGCTGGAATCCCAGTTCTGCCTGGCCGTGTCACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp GGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTaGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAG +
Preference number: 1 (lower is better)
Translates to: GLVWLVHCGPLNTRP*PQCGRFIPLGRWHK
Trigger: CTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
3UTR GCA 90 bp TTTCTGTTCCTATCTGGCTGCAGCGTGGGCAGGGGCAGCAGGAAATaGATGACCACAAGTGTGGGAGGAATGTTAGTGGCGGGAACGGCC +
Preference number: 1 (lower is better)
Translates to: FLFLSGCSVGRGSRK*MTTSVGGMLVAGTA
Trigger: GGCCGTTCCCGCCACTAACATTCCTCCCACACTTGTGGTCATGCATTTCCTGCTGCCCCTGCCCACGCTGCAGCCAGATAGGAACAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp GGGCACCTAAGTTCAGAGCTCAGCCCTCCATATTTCCCTGTGTCCTaGAAAGGTGGGGCCACCCTACAGCTGTCCCTGAGAGACTGCAGA +
Preference number: 1 (lower is better)
Translates to: GHLSSELSPPYFPVS*KGGATLQLSLRDCR
Trigger: TCTGCAGTCTCTCAGGGACAGCTGTAGGGTGGCCCCACCTTTCCAGGACACAGGGAAATATGGAGGGCTGAGCTCTGAACTTAGGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp CGTCTCCCCTCCCTCACACCCAGCTCCATGTGTGAGCAACCCTCTTaGCTCTGTCTTCAGAATCTTCACAGTCCAGTGCCTCTCGCCACT +
Preference number: 1 (lower is better)
Translates to: RLPSLTPSSMCEQPS*LCLQNLHSPVPLAT
Trigger: AGTGGCGAGAGGCACTGGACTGTGAAGATTCTGAAGACAGAGCCAAGAGGGTTGCTCACACATGGAGCTGGGTGTGAGGGAGGGGAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp TGGAGTAGGCAGGATGGACAGGGCAAGCAGACGCTAGGGGAGGGATaGGAGCAGCCACCTGGTACAGTGCCCAAGACACAGTTTACAGAA +
Preference number: 1 (lower is better)
Translates to: WSRQDGQGKQTLGEG*EQPPGTVPKTQFTE
Trigger: TTCTGTAAACTGTGTCTTGGGCACTGTACCAGGTGGCTGCTCCCATCCCTCCCCTAGCGTCTGCTTGCCCTGTCCATCCTGCCTACTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp GGAGGTCATTTTCCTGGTAGCTGTGCCTTCCTGGGTACTGCTGAATaGCAGGCTAAGCTCAGGCTGGAAACCCTGACCTCCTGCCATGCC +
Preference number: 1 (lower is better)
Translates to: GGHFPGSCAFLGTAE*QAKLRLETLTSCHA
Trigger: GGCATGGCAGGAGGTCAGGGTTTCCAGCCTGAGCTTAGCCTGCCATTCAGCAGTACCCAGGAAGGCACAGCTACCAGGAAAATGACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp TCTGGCCGCGCATGTAGAGGACATTGTGGGACATTGGGAAGAGGTTaGCAGCTTCTTGGGTACAGGCTGTGGCTTCTGCAGGCTTCCCGA +
Preference number: 1 (lower is better)
Translates to: SGRACRGHCGTLGRG*QLLGYRLWLLQASR
Trigger: TCGGGAAGCCTGCAGAAGCCACAGCCTGTACCCAAGAAGCTGCCAACCTCTTCCCAATGTCCCACAATGTCCTCTACATGCGCGGCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR TCA 90 bp AGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTaGACACTCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGG +
Preference number: 1 (lower is better)
Translates to: RAMIRGWFGWFTVAH*TLVPGLSVADSSPW
Trigger: CCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
3UTR TCA 90 bp TCATTGGCCAAGCATGGGTCACATGCCCAAACCCAAACCAGTCACTaGTACTGGGGAGCTGGAGGGCTCTGGTTGTTAAGGCTGGGCCCA +
Preference number: 1 (lower is better)
Translates to: SLAKHGSHAQTQTSH*YWGAGGLWLLRLGP
Trigger: TGGGCCCAGCCTTAACAACCAGAGCCCTCCAGCTCCCCAGTATCAGTGACTGGTTTGGGTTTGGGCATGTGACCCATGCTTGGCCAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp GAGCTCAGCAATCTGGCCGCGCATGTAGAGGACATTGTGGGACATTaGGAAGAGGTTGGCAGCTTCTTGGGTACAGGCTGTGGCTTCTGC +
Preference number: 1 (lower is better)
Translates to: ELSNLAAHVEDIVGH*EEVGSFLGTGCGFC
Trigger: GCAGAAGCCACAGCCTGTACCCAAGAAGCTGCCAACCTCTTCCCAATGTCCCACAATGTCCTCTACATGCGCGGCCAGATTGCTGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR TCA 90 bp ATTTCCCTGTGTCCTGGAAAGGTGGGGCCACCCTACAGCTGTCCCTaGGAGACTGCAGATACCTGCTCAGTTTCTCTCTGGTTCCGGATC +
Preference number: 1 (lower is better)
Translates to: ISLCPGKVGPPYSCP*ETADTCSVSLWFRI
Trigger: GATCCGGAACCAGAGAGAAACTGAGCAGGTATCTGCAGTCTCTCAGGGACAGCTGTAGGGTGGCCCCACCTTTCCAGGACACAGGGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 90 bp CCCTGTGCTTGCACTAAGCAAGATGGGAAACTGTATGGATTCCTATaGTGGAAAAATCTCGGGCCGCAGTGCTCCAGCGGTGACCCGGGG +
Preference number: 1 (lower is better)
Translates to: PCACTKQDGKLYGFL*WKNLGPQCSSGDPG
Trigger: CCCCGGGTCACCGCTGGAGCACTGCGGCCCGAGATTTTTCCATCATAGGAATCCATACAGTTTCCCATCTTGCTTAGTGCAAGCACAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 90 bp GCCACCTGGTACAGTGCCCAAGACACAGTTTACAGAACTTCAATATaGGTGGTGTCCCCTCACTGGGCAATGCCCACCCTGTCGGCCTTG +
Preference number: 1 (lower is better)
Translates to: ATWYSAQDTVYRTSI*VVSPHWAMPTLSAL
Trigger: CAAGGCCGACAGGGTGGGCATTGCCCAGTGAGGGGACACCACTCATATTGAAGTTCTGTAAACTGTGTCTTGGGCACTGTACCAGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 90 bp CATTGGGAAGAGGTTGGCAGCTTCTTGGGTACAGGCTGTGGCTTCTaGAGGCTTCCCGATGCCGATATAGACTTCAGCTGCATGGAGCCA +
Preference number: 1 (lower is better)
Translates to: HWEEVGSFLGTGCGF*RLPDADIDFSCMEP
Trigger: TGGCTCCATGCAGCTGAAGTCTATATCGGCATCGGGAAGCCTGCAGAAGCCACAGCCTGTACCCAAGAAGCTGCCAACCTCTTCCCAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR CCA 90 bp AACAAGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTaGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAG +
Preference number: 1 (lower is better)
Translates to: NKRNAHGESDDSGLV*LVHCGPLNTRPWPQ
Trigger: CTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
3UTR CCA 90 bp AAGTTCAGAGCTCAGCCCTCCATATTTCCCTGTGTCCTGGAAAGGTaGGGCCACCCTACAGCTGTCCCTGAGAGACTGCAGATACCTGCT +
Preference number: 1 (lower is better)
Translates to: KFRAQPSIFPCVLER*GHPTAVPERLQIPA
Trigger: AGCAGGTATCTGCAGTCTCTCAGGGACAGCTGTAGGGTGGCCCCACCTTTCCAGGACACAGGGAAATATGGAGGGCTGAGCTCTGAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp ATGGACGGACGGACGGACGGGTGGACGGATGAATGGATGGATGGATaGATGGACGGATGGATGAATGTCCTTAGTTGGGAAAGGCTCAGC +
Preference number: 1 (lower is better)
Translates to: MDGRTDGWTDEWMDG*MDGWMNVLSWERLS
Trigger: GCTGAGCCTTTCCCAACTAAGGACATTCATCCATCCGTCCATCCATCCATCCATCCATTCATCCGTCCACCCGTCCGTCCGTCCGTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp ATCCCGAGCCCTGGAACCTGTGACTATGTTGCCTTCCATGACAGATaGAGCGATGCAGATGTGATTGAACGAAGGCTCTCGAGGTGGGGC +
Preference number: 1 (lower is better)
Translates to: IPSPGTCDYVAFHDR*SDADVIERRLSRWG
Trigger: GCCCCACCTCGAGAGCCTTCGTTCAATCACATCTGCATCGCTCCATCTGTCATGGAAGGCAACATAGTCACAGGTTCCAGGGCTCGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 90 bp GCCCTGTGCCTCCAATCAGGGCAAGCTGCCACCACACTGAGTACCTaGCCCAGGTCCTACATTGCAAATTCCATGACTTATGACCACTCA +
Preference number: 1 (lower is better)
Translates to: ALCLQSGQAATTLST*PRSYIANSMTYDHS
Trigger: TGAGTGGTCATAAGTCATGGAATTTGCAATGTAGGACCTGGGGCAGGTACTCAGTGTGGTGGCAGCTTGCCCTGATTGGAGGCACAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 90 bp CCGTGGGTGAACTGGCTTCATTTCTATACAGGAGCTCTGTCCATCTaGCAGTGCAGACAGGCACAGTCCAGATCCAAAGGACAAGCTGGC +
Preference number: 1 (lower is better)
Translates to: PWVNWLHFYTGALSI*QCRQAQSRSKGQAG
Trigger: GCCAGCTTGTCCTTTGGATCTGGACTGTGCCTGTCTGCACTGGCAGATGGACAGAGCTCCTGTATAGAAATGAAGCCAGTTCACCCACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp GAATTCCCAAACCAAAACCAGGGCTGTTGCTGCAAAAAGGAGGCCTaGGTGCTGAGGACGCAGGAAACACGTCCCTACCTAGGGATCATC +
Preference number: 1 (lower is better)
Translates to: EFPNQNQGCCCKKEA*VLRTQETRPYLGII
Trigger: GATGATCCCTAGGTAGGGACGTGTTTCCTGCGTCCTCAGCACCCAGGCCTCCTTTTTGCAGCAACAGCCCTGGTTTTGGTTTGGGAATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp TGTGGGACATTGGGAAGAGGTTGGCAGCTTCTTGGGTACAGGCTGTaGCTTCTGCAGGCTTCCCGATGCCGATATAGACTTCAGCTGCAT +
Preference number: 1 (lower is better)
Translates to: CGTLGRGWQLLGYRL*LLQASRCRYRLQLH
Trigger: ATGCAGCTGAAGTCTATATCGGCATCGGGAAGCCTGCAGAAGCCACAGCCTGTACCCAAGAAGCTGCCAACCTCTTCCCAATGTCCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR TCA 90 bp CCTGTGACTATGTTGCCTTCCATGACAGATGGAGCGATGCAGATGTaGTTGAACGAAGGCTCTCGAGGTGGGGCAATGGCCCTGGACTAT +
Preference number: 1 (lower is better)
Translates to: PVTMLPSMTDGAMQM*LNEGSRGGAMALDY
Trigger: ATAGTCCAGGGCCATTGCCCCACCTCGAGAGCCTTCGTTCAATCACATCTGCATCGCTCCATCTGTCATGGAAGGCAACATAGTCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp ACGGACGGGTGGACGGATGAATGGATGGATGGATGGATGGACGGATaGATGAATGTCCTTAGTTGGGAAAGGCTCAGCAGGTCAGAAGAC +
Preference number: 1 (lower is better)
Translates to: TDGWTDEWMDGWMDG*MNVLSWERLSRSED
Trigger: GTCTTCTGACCTGCTGAGCCTTTCCCAACTAAGGACATTCATCCATCCGTCCATCCATCCATCCATCCATTCATCCGTCCACCCGTCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp ACACAGAGGTTCCAGGCAGAGTCTAGCTACTGGAGCCAACCAGCGTaGCTTCGGCCAGTTAACAGACCACTTCTTGGAGTCATGAGGATT +
Preference number: 1 (lower is better)
Translates to: TQRFQAESSYWSQPA*LRPVNRPLLGVMRI
Trigger: AATCCTCATGACTCCAAGAAGTGGTCTGTTAACTGGCCGAAGCCACGCTGGTTGGCTCCAGTAGCTAGACTCTGCCTGGAACCTCTGTGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 90 bp ACGGGTGGACGGATGAATGGATGGATGGATGGATGGACGGATGGATaGATGTCCTTAGTTGGGAAAGGCTCAGCAGGTCAGAAGACTAGG +
Preference number: 1 (lower is better)
Translates to: TGGRMNGWMDGWTDG*MSLVGKGSAGQKTR
Trigger: CCTAGTCTTCTGACCTGCTGAGCCTTTCCCAACTAAGGACATTCATCCATCCGTCCATCCATCCATCCATCCATTCATCCGTCCACCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp TGTCTAGCGTCTGCGTCCTCATCTATTAATGGATGGACGGATGGATaGATGGATGGATGGATGGATGGATGGATGGATGGACGGACGGAC +
Preference number: 1 (lower is better)
Translates to: CLASASSSINGWTDG*MDGWMDGWMDGRTD
Trigger: GTCCGTCCGTCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCGTCCATCCATTAATAGATGAGGACGCAGACGCTAGACA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp CTCACCATCCCTCTTAAAGGTGAAGAAGCCCAGTGTCCTCCAGGGTaGGCACCTTCTTGTCACTCAATGTCACTGTCTTACAGAGGTGTC +
Preference number: 1 (lower is better)
Translates to: LTIPLKGEEAQCPPG*APSCHSMSLSYRGV
Trigger: GACACCTCTGTAAGACAGTGACATTGAGTGACAAGAAGGTGCCCACCCTGGAGGACACTGGGCTTCTTCACCTTTAAGAGGGATGGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 90 bp GTGAACTGGCTTCATTTCTATACAGGAGCTCTGTCCATCTGCCAGTaGAGACAGGCACAGTCCAGATCCAAAGGACAAGCTGGCTCAAGA +
Preference number: 1 (lower is better)
Translates to: VNWLHFYTGALSICQ*RQAQSRSKGQAGSR
Trigger: TCTTGAGCCAGCTTGTCCTTTGGATCTGGACTGTGCCTGTCTGCACTGGCAGATGGACAGAGCTCCTGTATAGAAATGAAGCCAGTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp ACTCCTCATCTGTCTGTTTCCTTCTACCAGAAGGTAGGTCCTAAGTaGATGCAGCATCTGTGTCACACATTGCTGTGCCCTCAGTGCCTG +
Preference number: 1 (lower is better)
Translates to: TPHLSVSFYQKVGPK*MQHLCHTLLCPQCL
Trigger: CAGGCACTGAGGGCACAGCAATGTGTGACACAGATGCTGCATCCACTTAGGACCTACCTTCTGGTAGAAGGAAACAGACAGATGAGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 90 bp GAGAGACTGCAGATACCTGCTCAGTTTCTCTCTGGTTCCGGATCTTaGTGTCTACTCTGTGGGATTCGGACTTTGGCTCAAACACCTCTA +
Preference number: 1 (lower is better)
Translates to: ERLQIPAQFLSGSGS*CLLCGIRTLAQTPL
Trigger: TAGAGGTGTTTGAGCCAAAGTCCGAATCCCACAGAGTAGACAGCAAGATCCGGAACCAGAGAGAAACTGAGCAGGTATCTGCAGTCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 90 bp CTATTATGGACTGCTTTTAGGCCAGAAATAAAGGCACATCTAGGTTaGGCTGGATTTCAGAGGGTGGAATCAACTCTTAAGGGTGAGGGG +
Preference number: 1 (lower is better)
Translates to: LLWTAFRPEIKAHLG*AGFQRVESTLKGEG
Trigger: CCCCTCACCCTTAAGAGTTGATTCCACCCTCTGAAATCCAGCTCAACCTAGATGTGCCTTTATTTCTGGCCTAAAAGCAGTCCATAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR TCA 90 bp GGCACCAAGCCCCTCATATGGACAGATCACAATTCGCTTCTCCTTTaGTCTGTTGGTGGACATTTGGATTGTGATCAGTTTTTGGCTATT +
Preference number: 1 (lower is better)
Translates to: GTKPLIWTDHNSLLL*SVGGHLDCDQFLAI
Trigger: AATAGCCAAAAACTGATCACAATCCAAATGTCCACCAACAGATCAAAGGAGAAGCGAATTGTGATCTGTCCATATGAGGGGCTTGGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 90 bp GCCTGCTGTAGTATTACCCAAACTTGGGCAAGTTTGTTCATCTTCTaGAGAGAGCTTCATTTCTCACCTGGACCTGTATCCGTAATAACT +
Preference number: 1 (lower is better)
Translates to: ACCSITQTWASLFIF*RELHFSPGPVSVIT
Trigger: AGTTATTACGGATACAGGTCCAGGTGAGAAATGAAGCTCTCTTCAGAAGATGAACAAACTTGCCCAAGTTTGGGTAATACTACAGCAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 90 bp TTCTTTATAAATTACCTAGTCTCGGGTATGTCTTTATTAGCTGCATaGGGACGTACTAATACGGTGCCTTTCATCCAGGACCCCGTACCA +
Preference number: 1 (lower is better)
Translates to: FFINYLVSGMSLLAA*GRTNTVPFIQDPVP
Trigger: TGGTACGGGGTCCTGGATGAAAGGCACCGTATTAGTACGTCCTCATGCAGCTAATAAAGACATACCCGAGACTAGGTAATTTATAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 90 bp TCTGGAGATAATTTAAAGTTGATCCCCTATTTGTACATTACAGGATaGTCTTCCCTCTTCACATGGTCTGGTCCTTGCTGGCAATGTGAG +
Preference number: 1 (lower is better)
Translates to: SGDNLKLIPYLYITG*SSLFTWSGPCWQCE
Trigger: CTCACATTGCCAGCAAGGACCAGACCATGTGAAGAGGGAAGAGCATCCTGTAATGTACAAATAGGGGATCAACTTTAAATTATCTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 90 bp GTGCGTTGTTTTATTGGGTGCAGTGTATACTGCTCGGGTGATGGGTaGACCAAAATCTCACAAATCACCACTAAAGAACTTACTCATGTA +
Preference number: 1 (lower is better)
Translates to: VRCFIGCSVYCSGDG*TKISQITTKELTHV
Trigger: TACATGAGTAAGTTCTTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAGTATACACTGCACCCAATAAAACAACGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 90 bp TTGGGCAAGTTTGTTCATCTTCTGAAGAGAGCTTCATTTCTCACCTaGACCTGTATCCGTAATAACTGTATGCATATCATAGCACTGTCA +
Preference number: 1 (lower is better)
Translates to: LGKFVHLLKRASFLT*TCIRNNCMHIIALS
Trigger: TGACAGTGCTATGATATGCATACAGTTATTACGGATACAGGTCCAGGTGAGAAATGAAGCTCTCTTCAGAAGATGAACAAACTTGCCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 90 bp CCACTTAAATCATTGACAATAAAGAAAGGGTTAAACAGTCTGCAGTaGATCCATGTGAGGGGAGGTTATGCTGTCTCTAAGTTATCTAGA +
Preference number: 1 (lower is better)
Translates to: PLKSLTIKKGLNSLQ*IHVRGGYAVSKLSR
Trigger: TCTAGATAACTTAGAGACAGCATAACCTCCCCTCACATGGATGCACTGCAGACTGTTTAACCCTTTCTTTATTGTCAATGATTTAAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp GCTCCTAGGAGAGTAGGTGGCCAGGTCCCGATGCAGGCTCCAGCCCAGCAGGCCACCCTCCTCAGGCCTTaGCTGGACCCAGGGCCCGAG +
Preference number: 2 (lower is better)
Translates to: APRRVGGQVPMQAPAQQATLLRP*LDPGPE
Trigger: CTCGGGCCCTGGGTCCAGCCAAGGCCTGAGGAGGGT...GGCCTGCTGGGCTGGAGCCTGCATCGGGACCTGGCCACCTACTCTCCTAGGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp GCTCCTAGGAGAGTAGGTGGCCAGGTCCCGATGCAGGCTCCAGCCCAGCAGGCCCACCGCCTCAGGCAGTaGCGGATGGGAGCCTCCTGT +
Preference number: 2 (lower is better)
Translates to: APRRVGGQVPMQAPAQQAHRLRQ*RMGASC
Trigger: ACAGGAGGCTCCCATCCGCCACTGCCTGAGGCGGTG...GGCCTGCTGGGCTGGAGCCTGCATCGGGACCTGGCCACCTACTCTCCTAGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR TCA 90 bp GCTCCTAGGAGAGTAGGTGGCCAGGTCCCGATGCAGGCTCCAGCCCAGCAGGCCGCCCCACTCAGGGCTTaGGTGTCCAGGAGGAGTCCT +
Preference number: 2 (lower is better)
Translates to: APRRVGGQVPMQAPAQQAAPLRA*VSRRSP
Trigger: AGGACTCCTCCTGGACACTCAAGCCCTGAGTGGGGC...GGCCTGCTGGGCTGGAGCCTGCATCGGGACCTGGCCACCTACTCTCCTAGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR GCA 90 bp GCTCCTAGGAGAGTAGGTGGCCAGGTCCCGATGCAGGCTCCAGCCCAGCAGGCCTCCCACGCTGCGGCCTaGAGAATAACGTGCTCCCCC +
Preference number: 2 (lower is better)
Translates to: APRRVGGQVPMQAPAQQASHAAA*RITCSP
Trigger: GGGGGAGCACGTTATTCTGCAGGCCGCAGCGTGGGA...GGCCTGCTGGGCTGGAGCCTGCATCGGGACCTGGCCACCTACTCTCCTAGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CAA 90 bp AGGGCCTGGCAGAGAAGGTCTGGTACAGCGCCTGCACCATCTGCCTaGGTGGCCCAGCCTCCTCCCTTCCTGGTCCTGATCCAGTGGGCC +
Preference number: 2 (lower is better)
Translates to: RAWQRRSGTAPAPSA*VAQPPPFLVLIQWA
Trigger: GGCCCACTGGATCAGGACCAGGAAGGGAGGAGGCTGGGCCACCAAGGCAGATGGTGCAGGCGCTGTACCAGACCTTCTCTGCCAGGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CAA 90 bp CAAAGGTTCCAGCCCATCTGGGTTCCTGTGAGGCTCCCTCCTGGCTaGCGGGTGGCCGCCTTCTCCGTGTGTCCTGGCGTGGCTGAGCGT +
Preference number: 2 (lower is better)
Translates to: QRFQPIWVPVRLPPG*RVAAFSVCPGVAER
Trigger: ACGCTCAGCCACGCCAGGACACACGGAGAAGGCGGCCACCCGCAAGCCAGGAGGGAGCCTCACAGGAACCCAGATGGGCTGGAACCTTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp TGGAGTAGGCAGGATGGACAGGGCAAGCAGACGCTAGGGGAGGGATGGGAGCAGGCAGGGGCCGAGCGCTaGGAGGGTATGGGGGCATTG +
Preference number: 2 (lower is better)
Translates to: WSRQDGQGKQTLGEGWEQAGAER*EGMGAL
Trigger: CAATGCCCCCATACCCTCCCAGCGCTCGGCCCCTGC...CTGCTCCCATCCCTCCCCTAGCGTCTGCTTGCCCTGTCCATCCTGCCTACTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CAA 90 bp TGTGGCCGCCGGGGAGATGCGTGGGGCCATCTGGAGGAGTCTGGGTaGCTCCATGTGATCACAGACACGCCCACCTGTGCACGAGCATGC +
Preference number: 2 (lower is better)
Translates to: CGRRGDAWGHLEESG*LHVITDTPTCARAC
Trigger: GCATGCTCGTGCACAGGTGGGCGTGTCTGTGATCACATGGAGCAACCCAGACTCCTCCAGATGGCCCCACGCATCTCCCCGGCGGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR TCA 90 bp ATGATGACTGTGTGGCCGCCGGGGAGATGCGTGGGGCCATCTGGAGGAGTCTGGACCCTCTGTGGCCCATaGGTGCAGGAGGCTGCTTGG +
Preference number: 2 (lower is better)
Translates to: MMTVWPPGRCVGPSGGVWTLCGP*VQEAAW
Trigger: CCAAGCAGCCTCCTGCACTCATGGGCCACAGAGGGT...CCAGACTCCTCCAGATGGCCCCACGCATCTCCCCGGCGGCCACACAGTCATCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR GCA 90 bp CTCCACCCCCAAGTCTCCTTGCCCCAGGCGCAATCACGGGTCTGCTTTCCCTCAGAAGCTCACCCTGCCTaGTCTCCGCCTCCCTTGCAG +
Preference number: 2 (lower is better)
Translates to: LHPQVSLPQAQSRVCFPSEAHPA*SPPPLQ
Trigger: CTGCAAGGGAGGCGGAGAGCAGGCAGGGTGAGCTTC...TGAGGGAAAGCAGACCCGTGATTGCGCCTGGGGCAAGGAGACTTGGGGGTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp CGTAGCCGCCGCATCGTTGCCCTGAGCTTGGAGGACCTCGCCCAGCCCGTTCCATGCATGCTCTTCACGTaGGTGGGGCTGATGGCTAAG +
Preference number: 2 (lower is better)
Translates to: RSRRIVALSLEDLAQPVPCMLFT*VGLMAK
Trigger: CTTAGCCATCAGCCCCACCCACGTGAAGAGCATGCA...TGGAACGGGCTGGGCGAGGTCCTCCAAGCTCAGGGCAACGATGCGGCGGCTACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR-3UTR TCA 90 bp ATGATGACTGTGTGGCCGCCGGGGAGATGCGTGGGGCCATCTGGAGGAGTCTGGCCCTACAGCTGTCCCTaGGAGACTGCAGATACCTGC +
Preference number: 2 (lower is better)
Translates to: MMTVWPPGRCVGPSGGVWPYSCP*ETADTC
Trigger: GCAGGTATCTGCAGTCTCTCAGGGACAGCTGTAGGG...CCAGACTCCTCCAGATGGCCCCACGCATCTCCCCGGCGGCCACACAGTCATCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR TCA 90 bp CTCCACCCCCAAGTCTCCTTGCCCCAGGCGCAATCACGGGTCTGCTTTCCCTCATCATCCTTCACCACCTaGCCATCCCCCTCCCCTCTG +
Preference number: 2 (lower is better)
Translates to: LHPQVSLPQAQSRVCFPSSSFTT*PSPSPL
Trigger: CAGAGGGGAGGGGGATGGTCAGGTGGTGAAGGATGA...TGAGGGAAAGCAGACCCGTGATTGCGCCTGGGGCAAGGAGACTTGGGGGTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR TCA 90 bp TGGAGTAGGCAGGATGGACAGGGCAAGCAGACGCTAGGGGAGGGATGGGAGCAGGAAGGAAAGGTGACGTaGGGTGGCCACGAGCCAAGG +
Preference number: 2 (lower is better)
Translates to: WSRQDGQGKQTLGEGWEQEGKVT*GGHEPR
Trigger: CCTTGGCTCGTGGCCACCTCACGTCACCTTTCCTTC...CTGCTCCCATCCCTCCCCTAGCGTCTGCTTGCCCTGTCCATCCTGCCTACTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR TCA 90 bp GCTCCTAGGAGAGTAGGTGGCCAGGTCCCGATGCAGGCTCCAGCCCAGCAGGCCCTGCGCCTTCTTTCCTaGTCTCTTCATTTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: APRRVGGQVPMQAPAQQALRLLS*SLHFPA
Trigger: GGCTGGGAAATGAAGAGATCAGGAAAGAAGGCGCAG...GGCCTGCTGGGCTGGAGCCTGCATCGGGACCTGGCCACCTACTCTCCTAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR GCA 90 bp CTCCACCCCCAAGTCTCCTTGCCCCAGGCGCAATCACGGGTCTGCTTTCCCTCACATGGGGTCGCCTGCTaGCTCCCGGTTACCCATACA +
Preference number: 2 (lower is better)
Translates to: LHPQVSLPQAQSRVCFPSHGVAC*LPVTHT
Trigger: TGTATGGGTAACCGGGAGGCAGCAGGCGACCCCATG...TGAGGGAAAGCAGACCCGTGATTGCGCCTGGGGCAAGGAGACTTGGGGGTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp GACCTCGTGGGCTGTCGAGTTCACCTGCACCGCGTCCCGGAGGATCTTCTCCGCCTGAACACTCGTCCCTaGCCTCAGTGTGGCAGATTC +
Preference number: 2 (lower is better)
Translates to: DLVGCRVHLHRVPEDLLRLNTRP*PQCGRF
Trigger: GAATCTGCCACACTGAGGCCAGGGACGAGTGTTCAG...GCGGAGAAGATCCTCCGGGACGCGGTGCAGGTGAACTCGACAGCCCACGAGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR-3UTR CCA 90 bp CCAGTGATGAAGCTCCCCAAGCTTCACTTGACTCTGAGGATCTTCTACGCCAGGGCCCCGTCAGGCCCATaGCTCCCAGCCCCGCATCCC +
Preference number: 2 (lower is better)
Translates to: PVMKLPKLHLTLRIFYARAPSGP*LPAPHP
Trigger: GGGATGCGGGGCTGGGAGCCATGGGCCTGACGGGGC...CCTGGCGTAGAAGATCCTCAGAGTCAAGTGAAGCTTGGGGAGCTTCATCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR TCA 90 bp CTACACCCCTTCCCTGGCTTCATCTTTCTCCATGCGTCACCCCACCTGCCATACCTCCCTTCCTGGTCCTaGTCCAGTGGGCCTTGCCCC +
Preference number: 2 (lower is better)
Translates to: LHPFPGFIFLHASPHLPYLPSWS*SSGPCP
Trigger: GGGGCAAGGCCCACTGGATCAGGACCAGGAAGGGAG...GTATGGCAGGTGGGGTGACGCATGGAGAAAGATGAAGCCAGGGAAGGGGTGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR TCA 90 bp CTGTGCCAGCGTCATCCAGGGGTGCAGCGGGCCCTGCTTAGGGGCACTGCTCTGAAGGCACATCTAGGTTaGGCTGGATTTCAGAGGGTG +
Preference number: 2 (lower is better)
Translates to: LCQRHPGVQRALLRGTALKAHLG*AGFQRV
Trigger: CACCCTCTGAAATCCAGCTCAACCTAGATGTGCCTT...CAGAGCAGTGCCCCTAAGCAGGGCCCGCTGCACCCCTGGATGACGCTGGCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR-3UTR GCA 90 bp CAAAACTGCATCCCCAGCATGGCTCTGGTCAAGGTCACTGCCAACCTGCACACCAGCGCCTGCACCATCTaGCTTGGTGGCCCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: QNCIPSMALVKVTANLHTSACTI*LGGPAS
Trigger: GGAGGCTGGGCCACCAAGGCAGATGGTGCAGGCGCT...GGTGTGCAGGTTGGCAGTGACCTTGACCAGAGCCATGCTGGGGATGCAGTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR GCA 90 bp ATGATGACTGTGTGGCCGCCGGGGAGATGCGTGGGGCCATCTGGAGGAGTCTGGCTCAGCCTCCCTAAGTaGTGGGATTACAGGCAGGAG +
Preference number: 2 (lower is better)
Translates to: MMTVWPPGRCVGPSGGVWLSLPK*WDYRQE
Trigger: CTCCTGCCTGTAATCCCAGCACTTAGGGAGGCTGAG...CCAGACTCCTCCAGATGGCCCCACGCATCTCCCCGGCGGCCACACAGTCATCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR GCA 90 bp AGCAATCTGGCCGCGCATGTAGAGGACATTGTGGGACATTGGGAAGAGGTTGGCGGGTGCAGCGGGCCCTaGTTAGGGGCACTGCTCTGC +
Preference number: 2 (lower is better)
Translates to: SNLAAHVEDIVGHWEEVGGCSGP*LGALLC
Trigger: GCAGAGCAGTGCCCCTAAGCAGGGCCCGCTGCACCC...GCCAACCTCTTCCCAATGTCCCACAATGTCCTCTACATGCGCGGCCAGATTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR-3UTR CCA 90 bp GCTCCTAGGAGAGTAGGTGGCCAGGTCCCGATGCAGGCTCCAGCCCAGCAGGCCGCGATGATTCGGGGTTaGTTTGGTTGGTTCACTGTG +
Preference number: 2 (lower is better)
Translates to: APRRVGGQVPMQAPAQQAAMIRG*FGWFTV
Trigger: CACAGTGAACCAACCAAACCAACCCCGAATCATCGC...GGCCTGCTGGGCTGGAGCCTGCATCGGGACCTGGCCACCTACTCTCCTAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp ATGATGACTGTGTGGCCGCCGGGGAGATGCGTGGGGCCATCTGGAGGAGTCTGGGTGCAGGAGGCTGCTTaGGCAGGACTGAATTGCATG +
Preference number: 2 (lower is better)
Translates to: MMTVWPPGRCVGPSGGVWVQEAA*AGLNCM
Trigger: CATGCAATTCAGTCCTGCCCAAGCAGCCTCCTGCAC...CCAGACTCCTCCAGATGGCCCCACGCATCTCCCCGGCGGCCACACAGTCATCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CAA 90 bp CCTCTGTGGCCCATGAGTGCAGGAGGCTGCTTGGGCAGGACTGAATaGCATGCTCCAATTCCAAAGCCCCATCGGGGGAGAGCTAAGGCG +
Preference number: 2 (lower is better)
Translates to: PLWPMSAGGCLGRTE*HAPIPKPHRGRAKA
Trigger: CGCCTTAGCTCTCCCCCGATGGGGCTTTGGAATTGGAGCATGCAATTCAGTCCTGCCCAAGCAGCCTCCTGCACTCATGGGCCACAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR GCA 90 bp CTCCACCCCCAAGTCTCCTTGCCCCAGGCGCAATCACGGGTCTGCTTTCCCTCAATGGGCCAGCCCTTTTaGAAACTGGCTGGGCCTAGT +
Preference number: 2 (lower is better)
Translates to: LHPQVSLPQAQSRVCFPSMGQPF*KLAGPS
Trigger: ACTAGGCCCAGCCAGTTTGCAAAAGGGCTGGCCCAT...TGAGGGAAAGCAGACCCGTGATTGCGCCTGGGGCAAGGAGACTTGGGGGTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR TCA 90 bp CCAGTGATGAAGCTCCCCAAGCTTCACTTGACTCTGAGGATCTTCTACGCCAGGCACGCTCCCCTGCTGTaGGCCTCCAATCCCCTGGCT +
Preference number: 2 (lower is better)
Translates to: PVMKLPKLHLTLRIFYARHAPLL*ASNPLA
Trigger: AGCCAGGGGATTGGAGGCTCACAGCAGGGGAGCGTG...CCTGGCGTAGAAGATCCTCAGAGTCAAGTGAAGCTTGGGGAGCTTCATCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR GCA 90 bp CAACCAGCGTGGCTTCGGCCAGTTAACAGACCACTTCTTGGAGTCATGAGGATTCTCTCCCTCCTTGGCTaGCCCCTAGCCCGCCTGCCT +
Preference number: 2 (lower is better)
Translates to: QPAWLRPVNRPLLGVMRILSLLG*PLARLP
Trigger: AGGCAGGCGGGCTAGGGGGCAGCCAAGGAGGGAGAG...AATCCTCATGACTCCAAGAAGTGGTCTGTTAACTGGCCGAAGCCACGCTGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR GCA 90 bp CCTATTTCCACATCCTTCTCTCTGAATGCAAGTCACCAAGTCCAGCCCACACTCCCAGCCCCCGCGCCCTaGAGGGCTGATACGCACAGG +
Preference number: 2 (lower is better)
Translates to: PISTSFSLNASHQVQPTLPAPAP*RADTHR
Trigger: CCTGTGCGTATCAGCCCTGCAGGGCGCGGGGGCTGG...GAGTGTGGGCTGGACTTGGTGACTTGCATTCAGAGAGAAGGATGTGGAAATAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR GCA 90 bp CTCCACCCCCAAGTCTCCTTGCCCCAGGCGCAATCACGGGTCTGCTTTCCCTCAACCACCTCTGACAGCTaGCTGCAGACTCACATCTCA +
Preference number: 2 (lower is better)
Translates to: LHPQVSLPQAQSRVCFPSTTSDS*LQTHIS
Trigger: TGAGATGTGAGTCTGCAGGCAGCTGTCAGAGGTGGT...TGAGGGAAAGCAGACCCGTGATTGCGCCTGGGGCAAGGAGACTTGGGGGTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp ACTCCCTACACCCCTTCCCTGGCTTCATCTTTCTCCATGCGTCACCCCACCTGCTGTGTCCTGGAAAGGTaGGGCCACCCTACAGCTGTC +
Preference number: 2 (lower is better)
Translates to: TPYTPSLASSFSMRHPTCCVLER*GHPTAV
Trigger: GACAGCTGTAGGGTGGCCCCACCTTTCCAGGACACA...GCAGGTGGGGTGACGCATGGAGAAAGATGAAGCCAGGGAAGGGGTGTAGGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp CTCCACCCCCAAGTCTCCTTGCCCCAGGCGCAATCACGGGTCTGCTTTCCCTCAAGGGGTGCTTCTCATTaGCCAAGCATGGGTCACATG +
Preference number: 2 (lower is better)
Translates to: LHPQVSLPQAQSRVCFPSRGASH*PSMGHM
Trigger: CATGTGACCCATGCTTGGCCAATGAGAAGCACCCCT...TGAGGGAAAGCAGACCCGTGATTGCGCCTGGGGCAAGGAGACTTGGGGGTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp GCAATGGCCCTGGACTATCCAGGGGGCCCAGAGCAACCAGCAGAGTCCTTAGAGAGACATTGGACTGTGTaGGGCTGGGGCCAAGGTACT +
Preference number: 2 (lower is better)
Translates to: AMALDYPGGPEQPAESLERHWTV*GWGQGT
Trigger: AGTACCTTGGCCCCAGCCCCACACAGTCCAATGTCT...CTCTAAGGACTCTGCTGGTTGCTCTGGGCCCCCTGGATAGTCCAGGGCCATTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp TGGAGTAGGCAGGATGGACAGGGCAAGCAGACGCTAGGGGAGGGATGGGAGCAGTATACACTGTTAGCATaGTCCACGAGGCCGCACCTG +
Preference number: 2 (lower is better)
Translates to: WSRQDGQGKQTLGEGWEQYTLLA*STRPHL
Trigger: CAGGTGCGGCCTCGTGGACCATGCTAACAGTGTATA...CTGCTCCCATCCCTCCCCTAGCGTCTGCTTGCCCTGTCCATCCTGCCTACTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp CTCCACCCCCAAGTCTCCTTGCCCCAGGCGCAATCACGGGTCTGCTTTCCCTCATGCATTTTGCATTCATaGGGGCACCGTCTGGCAAGG +
Preference number: 2 (lower is better)
Translates to: LHPQVSLPQAQSRVCFPSCILHS*GHRLAR
Trigger: CCTTGCCAGACGGTGCCCCCATGAATGCAAAATGCA...TGAGGGAAAGCAGACCCGTGATTGCGCCTGGGGCAAGGAGACTTGGGGGTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR GCA 90 bp TCACCAGGAAACCCTATTGTCCTCAGGGGGTCAAGGGCCAAACAGCAGAAGATGAGACACGCCCACCTGTaGACGAGCATGCACCTCCCC +
Preference number: 2 (lower is better)
Translates to: SPGNPIVLRGSRAKQQKMRHAHL*TSMHLP
Trigger: GGGGAGGTGCATGCTCGTGCACAGGTGGGCGTGTCT...CATCTTCTGCTGTTTGGCCCTTGACCCCCTGAGGACAATAGGGTTTCCTGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp CAACCAGCGTGGCTTCGGCCAGTTAACAGACCACTTCTTGGAGTCATGAGGATTATCCCCTTGGGGCGATaGCACAAGCCCTGGTGCCCG +
Preference number: 2 (lower is better)
Translates to: QPAWLRPVNRPLLGVMRIIPLGR*HKPWCP
Trigger: CGGGCACCAGGGCTTGTGCCATCGCCCCAAGGGGAT...AATCCTCATGACTCCAAGAAGTGGTCTGTTAACTGGCCGAAGCCACGCTGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp CCAGGGTGGGCACCTTCTTGTCACTCAATGTCACTGTCTTACAGAGGTGTCCCCAGCGCTGGGAGGGTATaGGGGCATTGGAGGGAGACA +
Preference number: 2 (lower is better)
Translates to: PGWAPSCHSMSLSYRGVPSAGRV*GHWRET
Trigger: TGTCTCCCTCCAATGCCCCCATACCCTCCCAGCGCT...GGGGACACCTCTGTAAGACAGTGACATTGAGTGACAAGAAGGTGCCCACCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp CTTACAGAGGTGTCCCCGACCAGCCAATCTAAAGTAACCCTCCCCCTGTCACTTGGTGGAGGTTCAGGCTaGGCTGGGTGCTCAGGAAGC +
Preference number: 2 (lower is better)
Translates to: LTEVSPTSQSKVTLPLSLGGGSG*AGCSGS
Trigger: GCTTCCTGAGCACCCAGCCCAGCCTGAACCTCCACC...AAGTGACAGGGGGAGGGTTACTTTAGATTGGCTGGTCGGGGACACCTCTGTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp CTCCACCCCCAAGTCTCCTTGCCCCAGGCGCAATCACGGGTCTGCTTTCCCTCACTCGTCACCACTACCTaGAGATTCACCCATGTTGCT +
Preference number: 2 (lower is better)
Translates to: LHPQVSLPQAQSRVCFPSLVTTT*RFTHVA
Trigger: AGCAACATGGGTGAATCTCCAGGTAGTGGTGACGAG...TGAGGGAAAGCAGACCCGTGATTGCGCCTGGGGCAAGGAGACTTGGGGGTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CAA 90 bp GGAGCTCAGCAATCTGGCCGCGCATGTAGAGGACATTGTGGGACATaGGGAAGAGGTTGGCAGCTTCTTGGGTACAGGCTGTGGCTTCTG +
Preference number: 2 (lower is better)
Translates to: GAQQSGRACRGHCGT*GRGWQLLGYRLWLL
Trigger: CAGAAGCCACAGCCTGTACCCAAGAAGCTGCCAACCTCTTCCCAATGTCCCACAATGTCCTCTACATGCGCGGCCAGATTGCTGAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR-3UTR TCA 90 bp CTTACAGAGGTGTCCCCGACCAGCCAATCTAAAGTAACCCTCCCCCTGTCACTTTTCACTGTGGCCCACTaGACACTCGTCCCTGGCCTC +
Preference number: 2 (lower is better)
Translates to: LTEVSPTSQSKVTLPLSLFTVAH*TLVPGL
Trigger: GAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAA...AAGTGACAGGGGGAGGGTTACTTTAGATTGGCTGGTCGGGGACACCTCTGTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR GCA 90 bp CCTCTAGGCTTCAGGGCACCTAAGTTCAGAGCTCAGCCCTCCATATTTCCCTGTTCTGTGGCCCATGAGTaGAGGAGGCTGCTTGGGCAG +
Preference number: 2 (lower is better)
Translates to: PLGFRAPKFRAQPSIFPCSVAHE*RRLLGQ
Trigger: CTGCCCAAGCAGCCTCCTGCACTCATGGGCCACAGA...ACAGGGAAATATGGAGGGCTGAGCTCTGAACTTAGGTGCCCTGAAGCCTAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR GCA 90 bp CTTACAGAGGTGTCCCCGACCAGCCAATCTAAAGTAACCCTCCCCCTGTCACTTGGCGTGATCACTCACTaGAGCCTCAACCACCTGGGC +
Preference number: 2 (lower is better)
Translates to: LTEVSPTSQSKVTLPLSLGVITH*SLNHLG
Trigger: GCCCAGGTGGTTGAGGCTGCAGTGAGTGATCACGCC...AAGTGACAGGGGGAGGGTTACTTTAGATTGGCTGGTCGGGGACACCTCTGTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR GCA 90 bp CAACCAGCGTGGCTTCGGCCAGTTAACAGACCACTTCTTGGAGTCATGAGGATTATGGTCAGCGGGAGCTaGTGGCTCCAGGCAGACCTG +
Preference number: 2 (lower is better)
Translates to: QPAWLRPVNRPLLGVMRIMVSGS*WLQADL
Trigger: CAGGTCTGCCTGGAGCCAGCAGCTCCCGCTGACCAT...AATCCTCATGACTCCAAGAAGTGGTCTGTTAACTGGCCGAAGCCACGCTGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR GCA 90 bp CTCCACCCCCAAGTCTCCTTGCCCCAGGCGCAATCACGGGTCTGCTTTCCCTCAGAAGAAGGACATGTTTaGCTCCCCTTCCTCCATGAT +
Preference number: 2 (lower is better)
Translates to: LHPQVSLPQAQSRVCFPSEEGHV*LPFLHD
Trigger: ATCATGGAGGAAGGGGAGGCAAACATGTCCTTCTTC...TGAGGGAAAGCAGACCCGTGATTGCGCCTGGGGCAAGGAGACTTGGGGGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp CCAGGGTGGGCACCTTCTTGTCACTCAATGTCACTGTCTTACAGAGGTGTCCCCGATAACGGGAGGCCTTaGTTCCCTCCTTTCCCCACC +
Preference number: 2 (lower is better)
Translates to: PGWAPSCHSMSLSYRGVPDNGRP*FPPFPT
Trigger: GGTGGGGAAAGGAGGGAACCAAGGCCTCCCGTTATC...GGGGACACCTCTGTAAGACAGTGACATTGAGTGACAAGAAGGTGCCCACCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp CCAGTGATGAAGCTCCCCAAGCTTCACTTGACTCTGAGGATCTTCTACGCCAGGGCCCATTTTCCTGTGTaGGGTCCTCAGGCCCAGTGC +
Preference number: 2 (lower is better)
Translates to: PVMKLPKLHLTLRIFYARAHFPV*GPQAQC
Trigger: GCACTGGGCCTGAGGACCCCACACAGGAAAATGGGC...CCTGGCGTAGAAGATCCTCAGAGTCAAGTGAAGCTTGGGGAGCTTCATCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp GGAGCTCAGCAATCTGGCCGCGCATGTAGAGGACATTGTGGGACATTGGGAAGACTTGGGTACAGGCTGTaGCTTCTGCAGGCTTCCCGA +
Preference number: 2 (lower is better)
Translates to: GAQQSGRACRGHCGTLGRLGYRL*LLQASR
Trigger: TCGGGAAGCCTGCAGAAGCCACAGCCTGTACCCAAG...TCTTCCCAATGTCCCACAATGTCCTCTACATGCGCGGCCAGATTGCTGAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR-3UTR TCA 90 bp CCAGTGATGAAGCTCCCCAAGCTTCACTTGACTCTGAGGATCTTCTACGCCAGGACCCAAACCAGTCACTaGTACTGGGGAGCTGGAGGG +
Preference number: 2 (lower is better)
Translates to: PVMKLPKLHLTLRIFYARTQTSH*YWGAGG
Trigger: CCCTCCAGCTCCCCAGTATCAGTGACTGGTTTGGGT...CCTGGCGTAGAAGATCCTCAGAGTCAAGTGAAGCTTGGGGAGCTTCATCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR TCA 90 bp CAACCAGCGTGGCTTCGGCCAGTTAACAGACCACTTCTTGGAGTCATGAGGATTACCATGGTCGCTGTGTaGCAGCAGGAGCCTGACAGC +
Preference number: 2 (lower is better)
Translates to: QPAWLRPVNRPLLGVMRITMVAV*QQEPDS
Trigger: GCTGTCAGGCTCCTGCTGTCACACAGCGACCATGGT...AATCCTCATGACTCCAAGAAGTGGTCTGTTAACTGGCCGAAGCCACGCTGGTTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR TCA 90 bp CTTACAGAGGTGTCCCCGACCAGCCAATCTAAAGTAACCCTCCCCCTGTCACTTCCAAACAGCAGAAGATaGGGGAGACGAGGAGGGTGG +
Preference number: 2 (lower is better)
Translates to: LTEVSPTSQSKVTLPLSLPNSRR*GRRGGW
Trigger: CCACCCTCCTCGTCTCCCTCATCTTCTGCTGTTTGG...AAGTGACAGGGGGAGGGTTACTTTAGATTGGCTGGTCGGGGACACCTCTGTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR GCA 90 bp TTCCCCGGAGCTCAGCAATCTGGCCGCGCATGTAGAGGACATTGTGGGACATTGCTGCAGGCTTCCCGATaGCGATATAGACTTCAGCTG +
Preference number: 2 (lower is better)
Translates to: FPGAQQSGRACRGHCGTLLQASR*RYRLQL
Trigger: CAGCTGAAGTCTATATCGGCATCGGGAAGCCTGCAG...CAATGTCCCACAATGTCCTCTACATGCGCGGCCAGATTGCTGAGCTCCGGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR-3UTR CCA 90 bp CAACCAGCGTGGCTTCGGCCAGTTAACAGACCACTTCTTGGAGTCATGAGGATTGGACTGTGCAGACATTaGACTGTGTGGGGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: QPAWLRPVNRPLLGVMRIGLCRH*TVWGWG
Trigger: GCCCCAGCCCCACACAGTCCAATGTCTGCACAGTCC...AATCCTCATGACTCCAAGAAGTGGTCTGTTAACTGGCCGAAGCCACGCTGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp TCACCAGGAAACCCTATTGTCCTCAGGGGGTCAAGGGCCAAACAGCAGAAGATGCCCATGGATCCCAAATaGGGCTGGGGATGGGAAGTG +
Preference number: 2 (lower is better)
Translates to: SPGNPIVLRGSRAKQQKMPMDPK*GWGWEV
Trigger: CACTTCCCATCCCCAGCCCCATTTGGGATCCATGGG...CATCTTCTGCTGTTTGGCCCTTGACCCCCTGAGGACAATAGGGTTTCCTGGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp CCTATTTCCACATCCTTCTCTCTGAATGCAAGTCACCAAGTCCAGCCCACACTCGCCGGACAGAGAGCCTaGAGGAAGCTGGAGTCTGGG +
Preference number: 2 (lower is better)
Translates to: PISTSFSLNASHQVQPTLAGQRA*RKLESG
Trigger: CCCAGACTCCAGCTTCCTCCAGGCTCTCTGTCCGGC...GAGTGTGGGCTGGACTTGGTGACTTGCATTCAGAGAGAAGGATGTGGAAATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp GGAGCTCAGCAATCTGGCCGCGCATGTAGAGGACATTGTGGGACATTGGGAAGAAGGCTGCTACCGATGTaGCATGGACGGAGCCTCTTT +
Preference number: 2 (lower is better)
Translates to: GAQQSGRACRGHCGTLGRRLLPM*HGRSLF
Trigger: AAAGAGGCTCCGTCCATGCCACATCGGTAGCAGCCT...TCTTCCCAATGTCCCACAATGTCCTCTACATGCGCGGCCAGATTGCTGAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR CAA 90 bp GAGGAGCCATGCAGGGGTAGGGCTGGGCTGTGCTCGGCCATGTGCTaGTGTTTTACACACCCTCTGAATCTTTACAACCACCTTGTTCTC +
Preference number: 2 (lower is better)
Translates to: EEPCRGRAGLCSAMC*CFTHPLNLYNHLVL
Trigger: GAGAACAAGGTGGTTGTAAAGATTCAGAGGGTGTGTAAAACACAAGCACATGGCCGAGCACAGCCCAGCCCTACCCCTGCATGGCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR TCA 90 bp ATGATGACTGTGTGGCCGCCGGGGAGATGCGTGGGGCCATCTGGAGGAGTCTGGACATTGCAAATTCCATaGCTTATGACCACTCAAAGC +
Preference number: 2 (lower is better)
Translates to: MMTVWPPGRCVGPSGGVWTLQIP*LMTTQS
Trigger: GCTTTGAGTGGTCATAAGTCATGGAATTTGCAATGT...CCAGACTCCTCCAGATGGCCCCACGCATCTCCCCGGCGGCCACACAGTCATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR GCA 90 bp ACTCCCTACACCCCTTCCCTGGCTTCATCTTTCTCCATGCGTCACCCCACCTGCTCTGGTTCCGGATCTTaGTGTCTACTCTGTGGGATT +
Preference number: 2 (lower is better)
Translates to: TPYTPSLASSFSMRHPTCSGSGS*CLLCGI
Trigger: AATCCCACAGAGTAGACAGCAAGATCCGGAACCAGA...GCAGGTGGGGTGACGCATGGAGAAAGATGAAGCCAGGGAAGGGGTGTAGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp AAACCAAAACCAGGGCTGTTGCTGCAAAAAGGAGGCCTGGGTGCTGAGGACGCATTGGTTGGTTCACTGTaGCCCACTGAACACTCGTCC +
Preference number: 2 (lower is better)
Translates to: KPKPGLLLQKGGLGAEDALVGSL*PTEHSS
Trigger: GGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAA...TGCGTCCTCAGCACCCAGGCCTCCTTTTTGCAGCAACAGCCCTGGTTTTGGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp CAAAACTGCATCCCCAGCATGGCTCTGGTCAAGGTCACTGCCAACCTGCACACCGTGGGATTCGGACTTTaGCTCAAACACCTCTACACC +
Preference number: 2 (lower is better)
Translates to: QNCIPSMALVKVTANLHTVGFGL*LKHLYT
Trigger: GGTGTAGAGGTGTTTGAGCCAAAGTCCGAATCCCAC...GGTGTGCAGGTTGGCAGTGACCTTGACCAGAGCCATGCTGGGGATGCAGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp ACTCCCTACACCCCTTCCCTGGCTTCATCTTTCTCCATGCGTCACCCCACCTGCTTGCTGTCTACTCTGTaGGATTCGGACTTTGGCTCA +
Preference number: 2 (lower is better)
Translates to: TPYTPSLASSFSMRHPTCLLSTL*DSDFGS
Trigger: TGAGCCAAAGTCCGAATCCCACAGAGTAGACAGCAA...GCAGGTGGGGTGACGCATGGAGAAAGATGAAGCCAGGGAAGGGGTGTAGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp CCAGGGTGGGCACCTTCTTGTCACTCAATGTCACTGTCTTACAGAGGTGTCCCCTATTTCCCTGTGTCCTaGAAAGGTGGGGCCACCCTA +
Preference number: 2 (lower is better)
Translates to: PGWAPSCHSMSLSYRGVPYFPVS*KGGATL
Trigger: TAGGGTGGCCCCACCTTTCCAGGACACAGGGAAATA...GGGGACACCTCTGTAAGACAGTGACATTGAGTGACAAGAAGGTGCCCACCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp CCAGGGTGGGCACCTTCTTGTCACTCAATGTCACTGTCTTACAGAGGTGTCCCCCTGATACTGGGGAGCTaGAGGGCTCTGGTTGTTAAG +
Preference number: 2 (lower is better)
Translates to: PGWAPSCHSMSLSYRGVPLILGS*RALVVK
Trigger: CTTAACAACCAGAGCCCTCCAGCTCCCCAGTATCAG...GGGGACACCTCTGTAAGACAGTGACATTGAGTGACAAGAAGGTGCCCACCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp GCTCCTAGGAGAGTAGGTGGCCAGGTCCCGATGCAGGCTCCAGCCCAGCAGGCCAGATGGGAAACTGTATaGATTCCTATGATGGAAAAA +
Preference number: 2 (lower is better)
Translates to: APRRVGGQVPMQAPAQQARWETV*IPMMEK
Trigger: TTTTTCCATCATAGGAATCCATACAGTTTCCCATCT...GGCCTGCTGGGCTGGAGCCTGCATCGGGACCTGGCCACCTACTCTCCTAGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp GCCAAGCACACCCCTGAGAAACTGGAAAGGGCAAAGTTTGATGTCTTTCCTAGTGTGGTGTCCCCTCACTaGGCAATGCCCACCCTGTCG +
Preference number: 2 (lower is better)
Translates to: AKHTPEKLERAKFDVFPSVVSPH*AMPTLS
Trigger: CGACAGGGTGGGCATTGCCCAGTGAGGGGACACCAC...ACTAGGAAAGACATCAAACTTTGCCCTTTCCAGTTTCTCAGGGGTGTGCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp CCAGTGATGAAGCTCCCCAAGCTTCACTTGACTCTGAGGATCTTCTACGCCAGGTGGTCTGGTCCTTGCTaGCAATGTGAGGATGGGCCA +
Preference number: 2 (lower is better)
Translates to: PVMKLPKLHLTLRIFYARWSGPC*QCEDGP
Trigger: TGGCCCATCCTCACATTGCCAGCAAGGACCAGACCA...CCTGGCGTAGAAGATCCTCAGAGTCAAGTGAAGCTTGGGGAGCTTCATCACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CAA 90 bp CATGTAGAGGACATTGTGGGACATTGGGAAGAGGTTGGCAGCTTCTaGGGTACAGGCTGTGGCTTCTGCAGGCTTCCCGATGCCGATATA +
Preference number: 2 (lower is better)
Translates to: HVEDIVGHWEEVGSF*GTGCGFCRLPDADI
Trigger: TATATCGGCATCGGGAAGCCTGCAGAAGCCACAGCCTGTACCCAAGAAGCTGCCAACCTCTTCCCAATGTCCCACAATGTCCTCTACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR-3UTR TCA 90 bp CCTATTTCCACATCCTTCTCTCTGAATGCAAGTCACCAAGTCCAGCCCACACTCGGAGAACTCCAAGGATaGTGGGGAGGGTGCCTGCAA +
Preference number: 2 (lower is better)
Translates to: PISTSFSLNASHQVQPTLGELQG*WGGCLQ
Trigger: TTGCAGGCACCCTCCCCATCATCCTTGGAGTTCTCC...GAGTGTGGGCTGGACTTGGTGACTTGCATTCAGAGAGAAGGATGTGGAAATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR TCA 90 bp CAACCAGCGTGGCTTCGGCCAGTTAACAGACCACTTCTTGGAGTCATGAGGATTTCCTTGCTGGCAATGTaGGGATGGGCCAATGTGAGG +
Preference number: 2 (lower is better)
Translates to: QPAWLRPVNRPLLGVMRISLLAM*GWANVR
Trigger: CCTCACATTGGCCCATCCTCACATTGCCAGCAAGGA...AATCCTCATGACTCCAAGAAGTGGTCTGTTAACTGGCCGAAGCCACGCTGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR GCA 90 bp CCTATTTCCACATCCTTCTCTCTGAATGCAAGTCACCAAGTCCAGCCCACACTCTGGTGGCAAGAGGGCTaGTGCAGTTCCAGCCTCACT +
Preference number: 2 (lower is better)
Translates to: PISTSFSLNASHQVQPTLWWQEG*CSSSLT
Trigger: AGTGAGGCTGGAACTGCAGCAGCCCTCTTGCCACCA...GAGTGTGGGCTGGACTTGGTGACTTGCATTCAGAGAGAAGGATGTGGAAATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR GCA 90 bp CCAGGGTGGGCACCTTCTTGTCACTCAATGTCACTGTCTTACAGAGGTGTCCCCCAAGCATGGGTCACATaGCCAAACCCAAACCAGTCA +
Preference number: 2 (lower is better)
Translates to: PGWAPSCHSMSLSYRGVPQAWVT*PNPNQS
Trigger: TGACTGGTTTGGGTTTGGGCATGTGACCCATGCTTG...GGGGACACCTCTGTAAGACAGTGACATTGAGTGACAAGAAGGTGCCCACCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR GCA 90 bp CCTATTTCCACATCCTTCTCTCTGAATGCAAGTCACCAAGTCCAGCCCACACTCGCTGGAAACACAAGGTaGTCAGCGAGGCCGCCTTCA +
Preference number: 2 (lower is better)
Translates to: PISTSFSLNASHQVQPTLAGNTR*SARPPS
Trigger: TGAAGGCGGCCTCGCTGAGCACCTTGTGTTTCCAGC...GAGTGTGGGCTGGACTTGGTGACTTGCATTCAGAGAGAAGGATGTGGAAATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp AGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTCTGAACACTCGTCCCTaGCCTCAGTGTGGCAGATTC +
Preference number: 2 (lower is better)
Translates to: RETHMARAMIRGWFGWFTLNTRP*PQCGRF
Trigger: GAATCTGCCACACTGAGGCCAGGGACGAGTGTTCAG...AGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
3UTR CAA 90 bp CTCTCTGGTTCCGGATCTTGCTGTCTACTCTGTGGGATTCGGACTTaGGCTCAAACACCTCTACACCTTCTTCTCATGGTGGCAAGAGGG +
Preference number: 2 (lower is better)
Translates to: LSGSGSCCLLCGIRT*AQTPLHLLLMVARG
Trigger: CCCTCTTGCCACCATGAGAAGAAGGTGTAGAGGTGTTTGAGCCAAAGTCCGAATCCCACAGAGTAGACAGCAAGATCCGGAACCAGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR GCA 90 bp CCAGTGATGAAGCTCCCCAAGCTTCACTTGACTCTGAGGATCTTCTACGCCAGGGATCTGACTGCATTTTaGATTCATGGGGGCACCGTC +
Preference number: 2 (lower is better)
Translates to: PVMKLPKLHLTLRIFYARDLTAF*IHGGTV
Trigger: GACGGTGCCCCCATGAATGCAAAATGCAGTCAGATC...CCTGGCGTAGAAGATCCTCAGAGTCAAGTGAAGCTTGGGGAGCTTCATCACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp CTACACCCCTTCCCTGGCTTCATCTTTCTCCATGCGTCACCCCACCTGCCATACTCCACTGGGCAGACCTaGGCACTTTTGAAATGTTTA +
Preference number: 2 (lower is better)
Translates to: LHPFPGFIFLHASPHLPYSTGQT*ALLKCL
Trigger: TAAACATTTCAAAAGTGCCCAGGTCTGCCCAGTGGA...GTATGGCAGGTGGGGTGACGCATGGAGAAAGATGAAGCCAGGGAAGGGGTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CAA 90 bp GGCCATGAGCCAAGCACACCCCTGAGAAACTGGAAAGGGCAAAGTTaGATGTCTTTCCTAGTACTTCCAGAAAGAACAGCCCTGCCGTCA +
Preference number: 2 (lower is better)
Translates to: GHEPSTPLRNWKGQS*MSFLVLPERTALPS
Trigger: TGACGGCAGGGCTGTTCTTTCTGGAAGTACTAGGAAAGACATCAAACTTTGCCCTTTCCAGTTTCTCAGGGGTGTGCTTGGCTCATGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR GCA 90 bp CCTATTTCCACATCCTTCTCTCTGAATGCAAGTCACCAAGTCCAGCCCACACTCTCGAGATTGTGCCATTaGGCTCCAGCCTGGACAACA +
Preference number: 2 (lower is better)
Translates to: PISTSFSLNASHQVQPTLSRLCH*APAWTT
Trigger: TGTTGTCCAGGCTGGAGCGCAATGGCACAATCTCGA...GAGTGTGGGCTGGACTTGGTGACTTGCATTCAGAGAGAAGGATGTGGAAATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp CATGTAGAGGACATTGTGGGACATTGGGAAGAGGTTGGCAGCTTCTTGGGTACAGATTCGGGGTTGGTTTaGTTGGTTCACTGTGGCCCA +
Preference number: 2 (lower is better)
Translates to: HVEDIVGHWEEVGSFLGTDSGLV*LVHCGP
Trigger: TGGGCCACAGTGAACCAACCAAACCAACCCCGAATC...TGTACCCAAGAAGCTGCCAACCTCTTCCCAATGTCCCACAATGTCCTCTACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR-3UTR CCA 90 bp CCTATTTCCACATCCTTCTCTCTGAATGCAAGTCACCAAGTCCAGCCCACACTCCCTACACCCCTTCCCTaGCTTCATCTTTCTCCATGC +
Preference number: 2 (lower is better)
Translates to: PISTSFSLNASHQVQPTLPTPLP*LHLSPC
Trigger: GCATGGAGAAAGATGAAGCCAGGGAAGGGGTGTAGG...GAGTGTGGGCTGGACTTGGTGACTTGCATTCAGAGAGAAGGATGTGGAAATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp GCCAAGCACACCCCTGAGAAACTGGAAAGGGCAAAGTTTGATGTCTTTCCTAGTGCAGGAATGAGAAGGTaGCGATATGGAGAGAGGGGG +
Preference number: 2 (lower is better)
Translates to: AKHTPEKLERAKFDVFPSAGMRR*RYGERG
Trigger: CCCCCTCTCTCCATATCGCCACCTTCTCATTCCTGC...ACTAGGAAAGACATCAAACTTTGCCCTTTCCAGTTTCTCAGGGGTGTGCTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp GCCAAGCACACCCCTGAGAAACTGGAAAGGGCAAAGTTTGATGTCTTTCCTAGTGTAGCTGTGCCTTCCTaGGTACTGCTGAATGGCAGG +
Preference number: 2 (lower is better)
Translates to: AKHTPEKLERAKFDVFPSVAVPS*VLLNGR
Trigger: CCTGCCATTCAGCAGTACCCAGGAAGGCACAGCTAC...ACTAGGAAAGACATCAAACTTTGCCCTTTCCAGTTTCTCAGGGGTGTGCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp CTCCACCCCCAAGTCTCCTTGCCCCAGGCGCAATCACGGGTCTGCTTTCCCTCAAAAAATCTATACTCATaGGAGAATGCTGCAAGACAA +
Preference number: 2 (lower is better)
Translates to: LHPQVSLPQAQSRVCFPSKNLYS*ENAARQ
Trigger: TTGTCTTGCAGCATTCTCCCATGAGTATAGATTTTT...TGAGGGAAAGCAGACCCGTGATTGCGCCTGGGGCAAGGAGACTTGGGGGTGGAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR TCA 90 bp CCAGGGTGGGCACCTTCTTGTCACTCAATGTCACTGTCTTACAGAGGTGTCCCCGTTTTACACACCCTCTaGATCTTTACAACCACCTTG +
Preference number: 2 (lower is better)
Translates to: PGWAPSCHSMSLSYRGVPVLHTL*IFTTTL
Trigger: CAAGGTGGTTGTAAAGATTCAGAGGGTGTGTAAAAC...GGGGACACCTCTGTAAGACAGTGACATTGAGTGACAAGAAGGTGCCCACCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR GCA 90 bp GCCAAGCACACCCCTGAGAAACTGGAAAGGGCAAAGTTTGATGTCTTTCCTAGTCGTGCCCAGTTTGAATaGAGTCCTCTAGGCTTCAGG +
Preference number: 2 (lower is better)
Translates to: AKHTPEKLERAKFDVFPSRAQFE*SPLGFR
Trigger: CCTGAAGCCTAGAGGACTGCATTCAAACTGGGCACG...ACTAGGAAAGACATCAAACTTTGCCCTTTCCAGTTTCTCAGGGGTGTGCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR GCA 90 bp GCCAAGCACACCCCTGAGAAACTGGAAAGGGCAAAGTTTGATGTCTTTCCTAGTACCACACTGAGTACCTaGCCCAGGTCCTACATTGCA +
Preference number: 2 (lower is better)
Translates to: AKHTPEKLERAKFDVFPSTTLST*PRSYIA
Trigger: TGCAATGTAGGACCTGGGGCAGGTACTCAGTGTGGT...ACTAGGAAAGACATCAAACTTTGCCCTTTCCAGTTTCTCAGGGGTGTGCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp CAACCAGCGTGGCTTCGGCCAGTTAACAGACCACTTCTTGGAGTCATGAGGATTGGATGGATGGACGGATaGATGAATGTCCTTAGTTGG +
Preference number: 2 (lower is better)
Translates to: QPAWLRPVNRPLLGVMRIGWMDG*MNVLSW
Trigger: CCAACTAAGGACATTCATCCATCCGTCCATCCATCC...AATCCTCATGACTCCAAGAAGTGGTCTGTTAACTGGCCGAAGCCACGCTGGTTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR TCA 90 bp CCTATTTCCACATCCTTCTCTCTGAATGCAAGTCACCAAGTCCAGCCCACACTCTACAGAACTTCAATATaGGTGGTGTCCCCTCACTGG +
Preference number: 2 (lower is better)
Translates to: PISTSFSLNASHQVQPTLYRTSI*VVSPHW
Trigger: CCAGTGAGGGGACACCACTCATATTGAAGTTCTGTA...GAGTGTGGGCTGGACTTGGTGACTTGCATTCAGAGAGAAGGATGTGGAAATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR TCA 90 bp CCAGTGATGAAGCTCCCCAAGCTTCACTTGACTCTGAGGATCTTCTACGCCAGGTTTTTGTCATTCTTTTaGGGCAGGGTCTTGCTGTGT +
Preference number: 2 (lower is better)
Translates to: PVMKLPKLHLTLRIFYARFLSFF*GRVLLC
Trigger: ACACAGCAAGACCCTGCCTCAAAAGAATGACAAAAA...CCTGGCGTAGAAGATCCTCAGAGTCAAGTGAAGCTTGGGGAGCTTCATCACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CCA 90 bp CCAGTGATGAAGCTCCCCAAGCTTCACTTGACTCTGAGGATCTTCTACGCCAGGAAACAGAATATGAGGTaGGTGAGTGGGATTAAGGTG +
Preference number: 2 (lower is better)
Translates to: PVMKLPKLHLTLRIFYARKQNMR*VSGIKV
Trigger: CACCTTAATCCCACTCACCCACCTCATATTCTGTTT...CCTGGCGTAGAAGATCCTCAGAGTCAAGTGAAGCTTGGGGAGCTTCATCACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR TCA 90 bp GGGCCTCGGCAGAGTGACTGCAACTTCACTTTGGAAAACAGTAGTATGAAATTTTCAGGGCCATGTCGATaGTGTTCAGAGCGTCATGGT +
Preference number: 2 (lower is better)
Translates to: GPRQSDCNFTLENSSMKFSGPCR*CSERHG
Trigger: ACCATGACGCTCTGAACATCATCGACATGGCCCTGA...AAATTTCATACTACTGTTTTCCAAAGTGAAGTTGCAGTCACTCTGCCGAGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555239.5
3UTR-3UTR GCA 90 bp GGTTGTAGCAGGATTTCCATATCTGCAGCATGTGCTTACAAGTCAGCAGTGCCTCCTCGGCAGAGTGACTaGAACTTCACTTTGGAAAAC +
Preference number: 2 (lower is better)
Translates to: GCSRISISAACAYKSAVPPRQSD*NFTLEN
Trigger: GTTTTCCAAAGTGAAGTTGCAGTCACTCTGCCGAGG...AGGCACTGCTGACTTGTAAGCACATGCTGCAGATATGGAAATCCTGCTACAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555239.5
3UTR-3UTR CCA 90 bp CCTATTTCCACATCCTTCTCTCTGAATGCAAGTCACCAAGTCCAGCCCACACTCTCATCTGGTACAAAGTaGCAGAACCTGACGCTTTTG +
Preference number: 2 (lower is better)
Translates to: PISTSFSLNASHQVQPTLSSGTK*QNLTLL
Trigger: CAAAAGCGTCAGGTTCTGCCACTTTGTACCAGATGA...GAGTGTGGGCTGGACTTGGTGACTTGCATTCAGAGAGAAGGATGTGGAAATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR GCA 90 bp TCACCAGGAAACCCTATTGTCCTCAGGGGGTCAAGGGCCAAACAGCAGAAGATGCAGTTTATGGTAATTTaGTGCAACCACAGGCAATTA +
Preference number: 2 (lower is better)
Translates to: SPGNPIVLRGSRAKQQKMQFMVI*CNHRQL
Trigger: TAATTGCCTGTGGTTGCAGCAAATTACCATAAACTG...CATCTTCTGCTGTTTGGCCCTTGACCCCCTGAGGACAATAGGGTTTCCTGGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CAA 90 bp GTGCAGATGCCATTTGATGAGGGATCTTCAGATGGGGAGAGTGTCTaGGATTATCCAGGTAAGACCAATGTAATCAGGAGGCTCTTACAA +
Preference number: 2 (lower is better)
Translates to: VQMPFDEGSSDGESV*DYPGKTNVIRRLLQ
Trigger: TTGTAAGAGCCTCCTGATTACATTGGTCTTACCTGGATAATCCAAGACACTCTCCCCATCTGAAGATCCCTCATCAAATGGCATCTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR GCA 90 bp CCTATTTCCACATCCTTCTCTCTGAATGCAAGTCACCAAGTCCAGCCCACACTCCTGTCACTTCAAATTTaGTCTAATCATCTGCCAAGC +
Preference number: 2 (lower is better)
Translates to: PISTSFSLNASHQVQPTLLSLQI*SNHLPS
Trigger: GCTTGGCAGATGATTAGAGCAAATTTGAAGTGACAG...GAGTGTGGGCTGGACTTGGTGACTTGCATTCAGAGAGAAGGATGTGGAAATAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR TCA 90 bp GCCAAGCACACCCCTGAGAAACTGGAAAGGGCAAAGTTTGATGTCTTTCCTAGTACTGAAAGCTTGATTTaGCTTCTGACCTCCAAAACA +
Preference number: 2 (lower is better)
Translates to: AKHTPEKLERAKFDVFPSTESLI*LLTSKT
Trigger: TGTTTTGGAGGTCAGAAGTCAAATCAAGCTTTCAGT...ACTAGGAAAGACATCAAACTTTGCCCTTTCCAGTTTCTCAGGGGTGTGCTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CAA 90 bp CCAATTTCCCCACGTCCTCACAAACATTTGTTATTGTCTGTCTTTTaGATTATAGACATCCTAGTGGGTGTAAGGTGGTATCTCTTGGAG +
Preference number: 2 (lower is better)
Translates to: PISPRPHKHLLLSVF*IIDILVGVRWYLLE
Trigger: CTCCAAGAGATACCACCTTACACCCACTAGGATGTCTATAATCAAAAAGACAGACAATAACAAATGTTTGTGAGGACGTGGGGAAATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CAA 90 bp CAACAACGTATGAGGGTTCCAATTTCCCCACGTCCTCACAAACATTaGTTATTGTCTGTCTTTTTGATTATAGACATCCTAGTGGGTGTA +
Preference number: 2 (lower is better)
Translates to: QQRMRVPISPRPHKH*LLSVFLIIDILVGV
Trigger: TACACCCACTAGGATGTCTATAATCAAAAAGACAGACAATAACAAATGTTTGTGAGGACGTGGGGAAATTGGAACCCTCATACGTTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CAA 90 bp ATTAAAGAAAGAAACTCTGGAGATAATTTAAAGTTGATCCCCTATTaGTACATTACAGGATGCTCTTCCCTCTTCACATGGTCTGGTCCT +
Preference number: 2 (lower is better)
Translates to: IKERNSGDNLKLIPY*YITGCSSLFTWSGP
Trigger: AGGACCAGACCATGTGAAGAGGGAAGAGCATCCTGTAATGTACAAATAGGGGATCAACTTTAAATTATCTCCAGAGTTTCTTTCTTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp TGGCAGGGGCCGAGCGCTGGGAGGGTATGGGGGCATTaGAGGGAGACAGTGGCCAGAGTGGCTGACCCTGCC +
Preference number: 3 (lower is better)
Translates to: WQGPSAGRVWGH*RETVARVADPA
Trigger: GGCAGGGTCAGCCACTCTGGCCACTGTCTCCCTCCAATGCCCCCATACCCTCCCAGCGCTCGGCCCCTGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp GCTTGGAGGACCTCGCCCAGCCCGTTCCAGACCTCGTaGGCTGTCGAGTTCACCTGCACCGCGTCCCGGAGG +
Preference number: 3 (lower is better)
Translates to: AWRTSPSPFQTS*AVEFTCTASRR
Trigger: CCTCCGGGACGCGGTGCAGGTGAACTCGACAGCCCACGAGGTCTGGAACGGGCTGGGCGAGGTCCTCCAAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR TCA 72 bp GCCCCGTCAGGCCCATGGCTCCCAGCCCCGCATCCCTaGCACCTCCCACACTCTCGCCTCATCTTGGGCTCT +
Preference number: 3 (lower is better)
Translates to: APSGPWLPAPHP*HLPHSRLILGS
Trigger: AGAGCCCAAGATGAGGCGAGAGTGTGGGAGGTGTCAGGGATGCGGGGCTGGGAGCCATGGGCCTGACGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp GACAGCAGGAGCCTGACAGCCTCCCAGCTCCCACGCTaGGGCCTGCAGAATAACGTGCTCCCCCTGCCCCTC +
Preference number: 3 (lower is better)
Translates to: DSRSLTASQLPR*GLQNNVLPLPL
Trigger: GAGGGGCAGGGGGAGCACGTTATTCTGCAGGCCGCAGCGTGGGAGCTGGGAGGCTGTCAGGCTCCTGCTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp AAGGCTCAGCCCTGGGGCTCGGCCCATTTTCCTGTGTaGGGTCCTCAGGCCCAGTGCGGCTGCTACTGCCCG +
Preference number: 3 (lower is better)
Translates to: KAQPWGSAHFPV*GPQAQCGCYCP
Trigger: CGGGCAGTAGCAGCCGCACTGGGCCTGAGGACCCCACACAGGAAAATGGGCCGAGCCCCAGGGCTGAGCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CAA 90 bp ATGATGACTGTGTGGCCGCCGGGGAGATGCGTGGGGCCATCTGGAGGAGTCTGGCCTGCACCATCTGCCTaGGTGGCCCAGCCTCCTCCC +
Preference number: 3 (lower is better)
Translates to: MMTVWPPGRCVGPSGGVWPAPSA*VAQPPP
Trigger: GGGAGGAGGCTGGGCCACCAAGGCAGATGGTGCAGG...CCAGACTCCTCCAGATGGCCCCACGCATCTCCCCGGCGGCCACACAGTCATCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 72 bp GCCTCCTGTGCTGTGACCAAGTGGGACAGGGATGCATaGCCCTCCTCAGGCCTTGGCTGGACCCAGGGCCCG +
Preference number: 3 (lower is better)
Translates to: ASCAVTKWDRDA*PSSGLGWTQGP
Trigger: CGGGCCCTGGGTCCAGCCAAGGCCTGAGGAGGGTCATGCATCCCTGTCCCACTTGGTCACAGCACAGGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp TGGCAGGCTAAGCTCAGGCTGGAAACCCTGACCTCCTaGCATGCCCGGGGGAGGAGCCATGCAGGGGTAGGG +
Preference number: 3 (lower is better)
Translates to: WQAKLRLETLTS*HARGRSHAGVG
Trigger: CCCTACCCCTGCATGGCTCCTCCCCCGGGCATGGCAGGAGGTCAGGGTTTCCAGCCTGAGCTTAGCCTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp GATCCAGTGGGCCTTGCCCCACGCTCCCGCATGGGATaGCAGAGCCCAGCCCTGTGCCTCCAATCAGGGCAA +
Preference number: 3 (lower is better)
Translates to: DPVGLAPRSRMG*QSPALCLQSGQ
Trigger: TTGCCCTGATTGGAGGCACAGGGCTGGGCTCTGCCATCCCATGCGGGAGCGTGGGGCAAGGCCCACTGGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp GTTCCAGCCCATCTGGGTTCCTGTGAGGCTCCCTCCTaGCTTGCGGGTGGCCGCCTTCTCCGTGTGTCCTGG +
Preference number: 3 (lower is better)
Translates to: VPAHLGSCEAPS*LAGGRLLRVSW
Trigger: CCAGGACACACGGAGAAGGCGGCCACCCGCAAGCCAGGAGGGAGCCTCACAGGAACCCAGATGGGCTGGAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp GCAGGCAGAGAGTCTGGGCCCGCAATGATGACTGTGTaGCCGCCGGGGAGATGCGTGGGGCCATCTGGAGGA +
Preference number: 3 (lower is better)
Translates to: AGRESGPAMMTV*PPGRCVGPSGG
Trigger: TCCTCCAGATGGCCCCACGCATCTCCCCGGCGGCCACACAGTCATCATTGCGGGCCCAGACTCTCTGCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp CAAGTGGGACAGGGATGCATGACCCTCCTCAGGCCTTaGCTGGACCCAGGGCCCGAGGATGACCCTGTGGGG +
Preference number: 3 (lower is better)
Translates to: QVGQGCMTLLRP*LDPGPEDDPVG
Trigger: CCCCACAGGGTCATCCTCGGGCCCTGGGTCCAGCCAAGGCCTGAGGAGGGTCATGCATCCCTGTCCCACTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CAA 90 bp CATCCAGGGGTGCAGCGGGCCCTGCTTAGGGGCACTGCTCTGCAGAGACGAAGCGGCAGATTCATCCCCTaGGGGCGATGGCACAAGCCC +
Preference number: 3 (lower is better)
Translates to: HPGVQRALLRGTALQRRSGRFIP*GRWHKP
Trigger: GGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCC...GCTTCGTCTCTGCAGAGCAGTGCCCCTAAGCAGGGCCCGCTGCACCCCTGGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR TCA 72 bp GGGCCAGTCGCTGCATGCTCTTCACGTGGGTGGGGCTaGTGGCTAAGGCCTCTTCATACCACCGCCGCGCCT +
Preference number: 3 (lower is better)
Translates to: GPVAACSSRGWG*WLRPLHTTAAP
Trigger: AGGCGCGGCGGTGGTATGAAGAGGCCTTAGCCATCAGCCCCACCCACGTGAAGAGCATGCAGCGACTGGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR GCA 72 bp CCTCCCAGCTCCCACGCTGCGGCCTGCAGAATAACGTaGTCCCCCTGCCCCTCAAAGACGTCCACATCCCGA +
Preference number: 3 (lower is better)
Translates to: PPSSHAAACRIT*SPCPSKTSTSR
Trigger: TCGGGATGTGGACGTCTTTGAGGGGCAGGGGGAGCACGTTATTCTGCAGGCCGCAGCGTGGGAGCTGGGAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp GGGCGGCTCCTTCAAAGAAGGGCCTCCTCCCTCCTCTaGCTCCTCCTTCCCTTCCTGGTCCATTCGCCACCC +
Preference number: 3 (lower is better)
Translates to: GRLLQRRASSLL*LLLPFLVHSPP
Trigger: GGGTGGCGAATGGACCAGGAAGGGAAGGAGGAGGCAGAGGAGGGAGGAGGCCCTTCTTTGAAGGAGCCGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp GGATGGTCAGCGGGAGCTGCTGGCTCCAGGCAGACCTaGAGAAGATCCCCCACCACCTTCCTGCCACCTCTC +
Preference number: 3 (lower is better)
Translates to: GWSAGAAGSRQT*RRSPTTFLPPL
Trigger: GAGAGGTGGCAGGAAGGTGGTGGGGGATCTTCTGCAGGTCTGCCTGGAGCCAGCAGCTCCCGCTGACCATCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp AGCCCGTTCCAGACCTCGTGGGCTGTCGAGTTCACCTaGACCGCGTCCCGGAGGATCTTCTCCGCCAGACTG +
Preference number: 3 (lower is better)
Translates to: SPFQTSWAVEFT*TASRRIFSARL
Trigger: CAGTCTGGCGGAGAAGATCCTCCGGGACGCGGTGCAGGTGAACTCGACAGCCCACGAGGTCTGGAACGGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR CCA 72 bp GCAGAGAGACAGACAGACGAGCCCATGGATCCCAAATaGGGCTGGGGATGGGAAGTGGCCTGCCCCGGCCAC +
Preference number: 3 (lower is better)
Translates to: AERQTDEPMDPK*GWGWEVACPGH
Trigger: GTGGCCGGGGCAGGCCACTTCCCATCCCCAGCCCCATTTGGGATCCATGGGCTCGTCTGTCTGTCTCTCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp CCGCCGGGGAGATGCGTGGGGCCATCTGGAGGAGTCTaGGTTGCTCCATGTGATCACAGACACGCCCACCTG +
Preference number: 3 (lower is better)
Translates to: PPGRCVGPSGGV*VAPCDHRHAHL
Trigger: CAGGTGGGCGTGTCTGTGATCACATGGAGCAACCCAGACTCCTCCAGATGGCCCCACGCATCTCCCCGGCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp GGCCTTGGCTGGACCCAGGGCCCGAGGATGACCCTGTaGGGTCAAGGAGGCAAAGACAAGAGTGGTGGCGGT +
Preference number: 3 (lower is better)
Translates to: GLGWTQGPRMTL*GQGGKDKSGGG
Trigger: ACCGCCACCACTCTTGTCTTTGCCTCCTTGACCCCACAGGGTCATCCTCGGGCCCTGGGTCCAGCCAAGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 72 bp TCCACGCCCCTTGGTCTAAGCACCATGGTCGCTGTGTaGCAGCAGGAGCCTGACAGCCTCCCAGCTCCCACG +
Preference number: 3 (lower is better)
Translates to: STPLGLSTMVAV*QQEPDSLPAPT
Trigger: CGTGGGAGCTGGGAGGCTGTCAGGCTCCTGCTGTCACACAGCGACCATGGTGCTTAGACCAAGGGGCGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 72 bp CCTCCTCAGGCCTTGGCTGGACCCAGGGCCCGAGGATaGCCCTGTGGGGTCAAGGAGGCAAAGACAAGAGTG +
Preference number: 3 (lower is better)
Translates to: PPQALAGPRARG*PCGVKEAKTRV
Trigger: CACTCTTGTCTTTGCCTCCTTGACCCCACAGGGTCATCCTCGGGCCCTGGGTCCAGCCAAGGCCTGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 72 bp CCCCAGCCCAGGTACCTGTGTCTGGCCAGGGGTCCTTaGTACACCGTGGCTGAACACAGGCAGGAAGGCCTC +
Preference number: 3 (lower is better)
Translates to: PQPRYLCLARGP*YTVAEHRQEGL
Trigger: GAGGCCTTCCTGCCTGTGTTCAGCCACGGTGTATCAAGGACCCCTGGCCAGACACAGGTACCTGGGCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp TCCCCAGCATGGCTCTGGTCAAGGTCACTGCCAACCTaGACACCACCAGGCCCACGGTCAGCTCTCAGGCCA +
Preference number: 3 (lower is better)
Translates to: SPAWLWSRSLPT*TPPGPRSALRP
Trigger: TGGCCTGAGAGCTGACCGTGGGCCTGGTGGTGTGCAGGTTGGCAGTGACCTTGACCAGAGCCATGCTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp ATCTGTGCCAGCGTCATCCAGGGGTGCAGCGGGCCCTaGTTAGGGGCACTGCTCTGCAGAGACGAAGCCACT +
Preference number: 3 (lower is better)
Translates to: ICASVIQGCSGP*LGALLCRDEAT
Trigger: AGTGGCTTCGTCTCTGCAGAGCAGTGCCCCTAAGCAGGGCCCGCTGCACCCCTGGATGACGCTGGCACAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR GCA 72 bp CTAAGGCCTCTTCATACCACCGCCGCGCCTCGTCCATaGTTCCCCGGAGCTCAGCAATCTGGCCGCGCATGT +
Preference number: 3 (lower is better)
Translates to: LRPLHTTAAPRP*FPGAQQSGRAC
Trigger: ACATGCGCGGCCAGATTGCTGAGCTCCGGGGAAGCATGGACGAGGCGCGGCGGTGGTATGAAGAGGCCTTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR CCA 72 bp CTGAACACAGGCAGGAAGGCCTCACTGCCACCTGGGTaGGTGGAGGTTCAGGCTGGGCTGGGTGCTCAGGAA +
Preference number: 3 (lower is better)
Translates to: LNTGRKASLPPG*VEVQAGLGAQE
Trigger: TTCCTGAGCACCCAGCCCAGCCTGAACCTCCACCCACCCAGGTGGCAGTGAGGCCTTCCTGCCTGTGTTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 72 bp CCTGTGTCTGGCCAGGGGTCCTTGATACACCGTGGCTaGACACAGGCAGGAAGGCCTCACTGCCACCTGGGT +
Preference number: 3 (lower is better)
Translates to: PVSGQGSLIHRG*TQAGRPHCHLG
Trigger: ACCCAGGTGGCAGTGAGGCCTTCCTGCCTGTGTTCAGCCACGGTGTATCAAGGACCCCTGGCCAGACACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp CGTGTCCCCTACCTGGCACACACCACCTCTGACAGCTaGCTGCAGACTCACATCTCAGCCCAGAAGGCAGGC +
Preference number: 3 (lower is better)
Translates to: RVPYLAHTTSDS*LQTHISAQKAG
Trigger: GCCTGCCTTCTGGGCTGAGATGTGAGTCTGCAGGCAGCTGTCAGAGGTGGTGTGTGCCAGGTAGGGGACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp CTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTaGCAGATTCATCCCCTTGGGGCGATGGCACAAGCC +
Preference number: 3 (lower is better)
Translates to: LWPTEHSSLASV*QIHPLGAMAQA
Trigger: GGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
3UTR CCA 72 bp TCACCTCGGTCTCCTCCTAAGCCTGGAGCTCTCAGGTaGTGCAAGGCACACGGGGATCCCCCACATTGCAGG +
Preference number: 3 (lower is better)
Translates to: SPRSPPKPGALR*CKAHGDPPHCR
Trigger: CCTGCAATGTGGGGGATCCCCGTGTGCCTTGCACCACCTGAGAGCTCCAGGCTTAGGAGGAGACCGAGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 72 bp ATGATGGAAAAATCTCGGGCCGCAGTGCTCCAGCGGTaGCCCGGGGCCCGGCTCTCTTTCCACCTCCTCATT +
Preference number: 3 (lower is better)
Translates to: MMEKSRAAVLQR*PGARLSFHLLI
Trigger: AATGAGGAGGTGGAAAGAGAGCCGGGCCCCGGGTCACCGCTGGAGCACTGCGGCCCGAGATTTTTCCATCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp AAACTGCATCCCCAGCATGGCTCTGGTCAAGGTCACTaGCAACCTGCACACCACCAGGCCCACGGTCAGCTC +
Preference number: 3 (lower is better)
Translates to: KLHPQHGSGQGH*QPAHHQAHGQL
Trigger: GAGCTGACCGTGGGCCTGGTGGTGTGCAGGTTGGCAGTGACCTTGACCAGAGCCATGCTGGGGATGCAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp TGGGTTGCTCCATGTGATCACAGACACGCCCACCTGTaGACGAGCATGCACCTCCCCCAGGCCATGACCACA +
Preference number: 3 (lower is better)
Translates to: WVAPCDHRHAHL*TSMHLPQAMTT
Trigger: TGTGGTCATGGCCTGGGGGAGGTGCATGCTCGTGCACAGGTGGGCGTGTCTGTGATCACATGGAGCAACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp CAGTCCAGTGCCTCTCGCCACTTCCTCCACGCCCCTTaGTCTAAGCACCATGGTCGCTGTGTGACAGCAGGA +
Preference number: 3 (lower is better)
Translates to: QSSASRHFLHAP*SKHHGRCVTAG
Trigger: TCCTGCTGTCACACAGCGACCATGGTGCTTAGACCAAGGGGCGTGGAGGAAGTGGCGAGAGGCACTGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp TCACTGGGCAATGCCCACCCTGTCGGCCTTGAGAGGTaGTGGGGGAGGAGCAGGAATGAGAAGGTGGCGATA +
Preference number: 3 (lower is better)
Translates to: SLGNAHPVGLER*WGRSRNEKVAI
Trigger: TATCGCCACCTTCTCATTCCTGCTCCTCCCCCACCACCTCTCAAGGCCGACAGGGTGGGCATTGCCCAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp GGTACCTGTGTCTGGCCAGGGGTCCTTGATACACCGTaGCTGAACACAGGCAGGAAGGCCTCACTGCCACCT +
Preference number: 3 (lower is better)
Translates to: GTCVWPGVLDTP*LNTGRKASLPP
Trigger: AGGTGGCAGTGAGGCCTTCCTGCCTGTGTTCAGCCACGGTGTATCAAGGACCCCTGGCCAGACACAGGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 72 bp GTGGCCCATGAGTGCAGGAGGCTGCTTGGGCAGGACTaGATTGCATGCTCCAATTCCAAAGCCCCATCGGGG +
Preference number: 3 (lower is better)
Translates to: VAHECRRLLGQD*IACSNSKAPSG
Trigger: CCCCGATGGGGCTTTGGAATTGGAGCATGCAATTCAGTCCTGCCCAAGCAGCCTCCTGCACTCATGGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp CTGCTCTGCAGAGACGAAGCCACTTCCGACAGTGCCTaGTCCACTCTTGAGGCTGCTACCGATGTGGCATGG +
Preference number: 3 (lower is better)
Translates to: LLCRDEATSDSA*STLEAATDVAW
Trigger: CCATGCCACATCGGTAGCAGCCTCAAGAGTGGAGCAGGCACTGTCGGAAGTGGCTTCGTCTCTGCAGAGCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR CCA 72 bp TGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTaGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGA +
Preference number: 3 (lower is better)
Translates to: WLVHCGPLNTRP*PQCGRFIPLGR
Trigger: TCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
3UTR CCA 72 bp GCTCAGCCCTCCATATTTCCCTGTGTCCTGGAAAGGTaGGGCCACCCTACAGCTGTCCCTGAGAGACTGCAG +
Preference number: 3 (lower is better)
Translates to: AQPSIFPCVLER*GHPTAVPERLQ
Trigger: CTGCAGTCTCTCAGGGACAGCTGTAGGGTGGCCCCACCTTTCCAGGACACAGGGAAATATGGAGGGCTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp TGCTTCCCCATCAGAGGTGACACGGCCAGGCAGAACTaGGATTCCAGCCAGATCTGTGTGACCCACAGCCCA +
Preference number: 3 (lower is better)
Translates to: CFPIRGDTARQN*DSSQICVTHSP
Trigger: TGGGCTGTGGGTCACACAGATCTGGCTGGAATCCCAGTTCTGCCTGGCCGTGTCACCTCTGATGGGGAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp CAGGGAGAGGCCGTAGCCCTCACCACCGCTAATGACTaGCTACCACACAGAGGTTCCAGGCAGAGTCTAGCT +
Preference number: 3 (lower is better)
Translates to: QGEAVALTTAND*LPHRGSRQSLA
Trigger: AGCTAGACTCTGCCTGGAACCTCTGTGTGGTAGCCAGTCATTAGCGGTGGTGAGGGCTACGGCCTCTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp ACCAGCTCCTCCTTCTGTCCAGCCGGACAGAGAGCCTaGAGGAAGCTGGAGTCTGGGTTTCAGTGGCTACAG +
Preference number: 3 (lower is better)
Translates to: TSSSFCPAGQRA*RKLESGFQWLQ
Trigger: CTGTAGCCACTGAAACCCAGACTCCAGCTTCCTCCAGGCTCTCTGTCCGGCTGGACAGAAGGAGGAGCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp CCTCCCGGTTACCCATACAAACCATGGAAACAGGAATaGGTGACAGCCCCACGCTCCCCTGCTGTGAGCCTC +
Preference number: 3 (lower is better)
Translates to: PPGYPYKPWKQE*VTAPRSPAVSL
Trigger: GAGGCTCACAGCAGGGGAGCGTGGGGCTGTCACCCATTCCTGTTTCCATGGTTTGTATGGGTAACCGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CAA 90 bp CAACCAGCGTGGCTTCGGCCAGTTAACAGACCACTTCTTGGAGTCATGAGGATTCTGATCCAGTGGGCCTaGCCCCACGCTCCCGCATGG +
Preference number: 3 (lower is better)
Translates to: QPAWLRPVNRPLLGVMRILIQWA*PHAPAW
Trigger: CCATGCGGGAGCGTGGGGCAAGGCCCACTGGATCAG...AATCCTCATGACTCCAAGAAGTGGTCTGTTAACTGGCCGAAGCCACGCTGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CAA 90 bp CTTACAGAGGTGTCCCCGACCAGCCAATCTAAAGTAACCCTCCCCCTGTCACTTTGCTCTCCGCCTCCCTaGCAGCTGCTCCTGCGCCTT +
Preference number: 3 (lower is better)
Translates to: LTEVSPTSQSKVTLPLSLCSPPP*QLLLRL
Trigger: AAGGCGCAGGAGCAGCTGCAAGGGAGGCGGAGAGCA...AAGTGACAGGGGGAGGGTTACTTTAGATTGGCTGGTCGGGGACACCTCTGTAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CAA 90 bp CTTACAGAGGTGTCCCCGACCAGCCAATCTAAAGTAACCCTCCCCCTGTCACTTGGCAGATTCATCCCCTaGGGGCGATGGCACAAGCCC +
Preference number: 3 (lower is better)
Translates to: LTEVSPTSQSKVTLPLSLGRFIP*GRWHKP
Trigger: GGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCC...AAGTGACAGGGGGAGGGTTACTTTAGATTGGCTGGTCGGGGACACCTCTGTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CAA 90 bp GGAGCTCAGCAATCTGGCCGCGCATGTAGAGGACATTGTGGGACATTGGGAAGAGTGCCTGCTCCACTCTaGAGGCTGCTACCGATGTGG +
Preference number: 3 (lower is better)
Translates to: GAQQSGRACRGHCGTLGRVPAPL*RLLPMW
Trigger: CCACATCGGTAGCAGCCTCAAGAGTGGAGCAGGCAC...TCTTCCCAATGTCCCACAATGTCCTCTACATGCGCGGCCAGATTGCTGAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR-3UTR CAA 90 bp CACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACGAGGTTGGCAGCTTCTaGGGTACAGGCTGTGGCTTC +
Preference number: 3 (lower is better)
Translates to: HMARAMIRGWFGWFTVAHEVGSF*GTGCGF
Trigger: GAAGCCACAGCCTGTACCCAAGAAGCTGCCAACCTC...GTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR TCA 72 bp CGGCCAGGCAGAACTGGGATTCCAGCCAGATCTGTGTaGCCCACAGCCCAGTGGTCACCAGGAAACCCTATT +
Preference number: 3 (lower is better)
Translates to: RPGRTGIPARSV*PTAQWSPGNPI
Trigger: AATAGGGTTTCCTGGTGACCACTGGGCTGTGGGTCACACAGATCTGGCTGGAATCCCAGTTCTGCCTGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp GGCCAGGCCTCAAAGGCTTATGGTCAAGTGTGTGGCTaGTTCTGGAGTAGGCAGGATGGACAGGGCAAGCAG +
Preference number: 3 (lower is better)
Translates to: GQASKAYGQVCG*FWSRQDGQGKQ
Trigger: CTGCTTGCCCTGTCCATCCTGCCTACTCCAGAAGCAGCCACACACTTGACCATAAGCCTTTGAGGCCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp AAGAGCGACAGCCTTCTCTGTGGCTCCCGCTCTGACTaGACCGCTTTAGGTCACATGCTCACTCCTGACCCT +
Preference number: 3 (lower is better)
Translates to: KSDSLLCGSRSD*TALGHMLTPDP
Trigger: AGGGTCAGGAGTGAGCATGTGACCTAAAGCGGTCCAGTCAGAGCGGGAGCCACAGAGAAGGCTGTCGCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CAA 90 bp CCAGTGATGAAGCTCCCCAAGCTTCACTTGACTCTGAGGATCTTCTACGCCAGGTCTGGCAAGGTGAGCTaGTCAGGGAGAGGCCGTAGC +
Preference number: 3 (lower is better)
Translates to: PVMKLPKLHLTLRIFYARSGKVS*SGRGRS
Trigger: GCTACGGCCTCTCCCTGACAAGCTCACCTTGCCAGA...CCTGGCGTAGAAGATCCTCAGAGTCAAGTGAAGCTTGGGGAGCTTCATCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp CCAGGGGTGCTTCTCATTGGCCAAGCATGGGTCACATaGCCAAACCCAAACCAGTCACTGATACTGGGGAGC +
Preference number: 3 (lower is better)
Translates to: PGVLLIGQAWVT*PNPNQSLILGS
Trigger: GCTCCCCAGTATCAGTGACTGGTTTGGGTTTGGGCATGTGACCCATGCTTGGCCAATGAGAAGCACCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp CCAACCTGGCTTGACCCCACCTTAGTCAGCTTGGGCTaGCGTAAGAAAACCGCCACAGACAGGTGGCTTCAA +
Preference number: 3 (lower is better)
Translates to: PTWLDPTLVSLG*RKKTATDRWLQ
Trigger: TTGAAGCCACCTGTCTGTGGCGGTTTTCTTACGGCAGCCCAAGCTGACTAAGGTGGGGTCAAGCCAGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp GAGGTTGGCAGCTTCTTGGGTACAGGCTGTGGCTTCTaGAGGCTTCCCGATGCCGATATAGACTTCAGCTGC +
Preference number: 3 (lower is better)
Translates to: EVGSFLGTGCGF*RLPDADIDFSC
Trigger: GCAGCTGAAGTCTATATCGGCATCGGGAAGCCTGCAGAAGCCACAGCCTGTACCCAAGAAGCTGCCAACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR CCA 72 bp AACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTaGTTGGTTCACTGTGGCCCACTGAACACTCGTCCC +
Preference number: 3 (lower is better)
Translates to: NAHGESDDSGLV*LVHCGPLNTRP
Trigger: GGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
3UTR CCA 72 bp AGTTCAGAGCTCAGCCCTCCATATTTCCCTGTGTCCTaGAAAGGTGGGGCCACCCTACAGCTGTCCCTGAGA +
Preference number: 3 (lower is better)
Translates to: SSELSPPYFPVS*KGGATLQLSLR
Trigger: TCTCAGGGACAGCTGTAGGGTGGCCCCACCTTTCCAGGACACAGGGAAATATGGAGGGCTGAGCTCTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp TGCCCAAACCCAAACCAGTCACTGATACTGGGGAGCTaGAGGGCTCTGGTTGTTAAGGCTGGGCCCATGTGT +
Preference number: 3 (lower is better)
Translates to: CPNPNQSLILGS*RALVVKAGPMC
Trigger: ACACATGGGCCCAGCCTTAACAACCAGAGCCCTCCAGCTCCCCAGTATCAGTGACTGGTTTGGGTTTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp GAGGTTCAAAGAACAAAGCAAAGGTTCCAGCCCATCTaGGTTCCTGTGAGGCTCCCTCCTGGCTTGCGGGTG +
Preference number: 3 (lower is better)
Translates to: EVQRTKQRFQPI*VPVRLPPGLRV
Trigger: CACCCGCAAGCCAGGAGGGAGCCTCACAGGAACCCAGATGGGCTGGAACCTTTGCTTTGTTCTTTGAACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp TTTCCTGGTAGCTGTGCCTTCCTGGGTACTGCTGAATaGCAGGCTAAGCTCAGGCTGGAAACCCTGACCTCC +
Preference number: 3 (lower is better)
Translates to: FPGSCAFLGTAE*QAKLRLETLTS
Trigger: GGAGGTCAGGGTTTCCAGCCTGAGCTTAGCCTGCCATTCAGCAGTACCCAGGAAGGCACAGCTACCAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp CTTGGGGAGGTCATTTTCCTGGTAGCTGTGCCTTCCTaGGTACTGCTGAATGGCAGGCTAAGCTCAGGCTGG +
Preference number: 3 (lower is better)
Translates to: LGEVIFLVAVPS*VLLNGRLSSGW
Trigger: CCAGCCTGAGCTTAGCCTGCCATTCAGCAGTACCCAGGAAGGCACAGCTACCAGGAAAATGACCTCCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp GCTACCACACAGAGGTTCCAGGCAGAGTCTAGCTACTaGAGCCAACCAGCGTGGCTTCGGCCAGTTAACAGA +
Preference number: 3 (lower is better)
Translates to: ATTQRFQAESSY*SQPAWLRPVNR
Trigger: TCTGTTAACTGGCCGAAGCCACGCTGGTTGGCTCCAGTAGCTAGACTCTGCCTGGAACCTCTGTGTGGTAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CAA 90 bp CCAGTGATGAAGCTCCCCAAGCTTCACTTGACTCTGAGGATCTTCTACGCCAGGCCGTCACCTTGCCTTTaGCCCCATGAGGCCCGTTTT +
Preference number: 3 (lower is better)
Translates to: PVMKLPKLHLTLRIFYARPSPCL*PHEARF
Trigger: AAAACGGGCCTCATGGGGCAAAAGGCAAGGTGACGG...CCTGGCGTAGAAGATCCTCAGAGTCAAGTGAAGCTTGGGGAGCTTCATCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 72 bp ATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTaGACACTCGTCCCTGGCCTCAGTGTGGCAGATTCA +
Preference number: 3 (lower is better)
Translates to: IRGWFGWFTVAH*TLVPGLSVADS
Trigger: TGAATCTGCCACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
3UTR GCA 72 bp GCCTCAGTGAGCCAGAGAGGTCGTGCCCAGTTTGAATaGAGTCCTCTAGGCTTCAGGGCACCTAAGTTCAGA +
Preference number: 3 (lower is better)
Translates to: ASVSQRGRAQFE*SPLGFRAPKFR
Trigger: TCTGAACTTAGGTGCCCTGAAGCCTAGAGGACTGCATTCAAACTGGGCACGACCTCTCTGGCTCACTGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp AAGTTACTCCCCGACCATAGAGATGAGGAGACAGAGTaGTTCCCCATCAGAGGTGACACGGCCAGGCAGAAC +
Preference number: 3 (lower is better)
Translates to: KLLPDHRDEETE*FPIRGDTARQN
Trigger: GTTCTGCCTGGCCGTGTCACCTCTGATGGGGAAGCACTCTGTCTCCTCATCTCTATGGTCGGGGAGTAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp CTAAGAGGACTGTGCAGACATTGGACTGTGTGGGGCTaGGGCCAAGGTACTGGGGATGAAGTTGAATGGGAG +
Preference number: 3 (lower is better)
Translates to: LRGLCRHWTVWG*GQGTGDEVEWE
Trigger: CTCCCATTCAACTTCATCCCCAGTACCTTGGCCCCAGCCCCACACAGTCCAATGTCTGCACAGTCCTCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp CAAGCAGACGCTAGGGGAGGGATGGGAGCAGCCACCTaGTACAGTGCCCAAGACACAGTTTACAGAACTTCA +
Preference number: 3 (lower is better)
Translates to: QADARGGMGAAT*YSAQDTVYRTS
Trigger: TGAAGTTCTGTAAACTGTGTCTTGGGCACTGTACCAGGTGGCTGCTCCCATCCCTCCCCTAGCGTCTGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp TTCCAGGCAGAGTCTAGCTACTGGAGCCAACCAGCGTaGCTTCGGCCAGTTAACAGACCACTTCTTGGAGTC +
Preference number: 3 (lower is better)
Translates to: FQAESSYWSQPA*LRPVNRPLLGV
Trigger: GACTCCAAGAAGTGGTCTGTTAACTGGCCGAAGCCACGCTGGTTGGCTCCAGTAGCTAGACTCTGCCTGGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CAA 90 bp GCCAAGCACACCCCTGAGAAACTGGAAAGGGCAAAGTTTGATGTCTTTCCTAGTTGTCCTGAGATCCTCTaGGCTGAGTGGGGCGGCTCC +
Preference number: 3 (lower is better)
Translates to: AKHTPEKLERAKFDVFPSCPEIL*AEWGGS
Trigger: GGAGCCGCCCCACTCAGCCAAGAGGATCTCAGGACA...ACTAGGAAAGACATCAAACTTTGCCCTTTCCAGTTTCTCAGGGGTGTGCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CAA 90 bp GCCAAGCACACCCCTGAGAAACTGGAAAGGGCAAAGTTTGATGTCTTTCCTAGTAGCCCCACTCAGGGCTaGAGTGTCCAGGAGGAGTCC +
Preference number: 3 (lower is better)
Translates to: AKHTPEKLERAKFDVFPSSPTQG*SVQEES
Trigger: GGACTCCTCCTGGACACTCAAGCCCTGAGTGGGGCT...ACTAGGAAAGACATCAAACTTTGCCCTTTCCAGTTTCTCAGGGGTGTGCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 72 bp AAGCATGGGTCACATGCCCAAACCCAAACCAGTCACTaGTACTGGGGAGCTGGAGGGCTCTGGTTGTTAAGG +
Preference number: 3 (lower is better)
Translates to: KHGSHAQTQTSH*YWGAGGLWLLR
Trigger: CCTTAACAACCAGAGCCCTCCAGCTCCCCAGTATCAGTGACTGGTTTGGGTTTGGGCATGTGACCCATGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 72 bp ATGTTGCCTTCCATGACAGATGGAGCGATGCAGATGTaGTTGAACGAAGGCTCTCGAGGTGGGGCAATGGCC +
Preference number: 3 (lower is better)
Translates to: MLPSMTDGAMQM*LNEGSRGGAMA
Trigger: GGCCATTGCCCCACCTCGAGAGCCTTCGTTCAATCACATCTGCATCGCTCCATCTGTCATGGAAGGCAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 72 bp AGAGCTTCCGTATGTGATAAGGTTTCTCTCTGTGGATaGCATAGCCATGGGGTCGCCTGCTGCCTCCCGGTT +
Preference number: 3 (lower is better)
Translates to: RASVCDKVSLCG*HSHGVACCLPV
Trigger: AACCGGGAGGCAGCAGGCGACCCCATGGCTATGTCATCCACAGAGAGAAACCTTATCACATACGGAAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp CCATGCAGGGGTAGGGCTGGGCTGTGCTCGGCCATGTaGTTGTGTTTTACACACCCTCTGAATCTTTACAAC +
Preference number: 3 (lower is better)
Translates to: PCRGRAGLCSAM*LCFTHPLNLYN
Trigger: GTTGTAAAGATTCAGAGGGTGTGTAAAACACAAGCACATGGCCGAGCACAGCCCAGCCCTACCCCTGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp GTGCCCAAGACACAGTTTACAGAACTTCAATATGAGTaGTGTCCCCTCACTGGGCAATGCCCACCCTGTCGG +
Preference number: 3 (lower is better)
Translates to: VPKTQFTELQYE*CPLTGQCPPCR
Trigger: CCGACAGGGTGGGCATTGCCCAGTGAGGGGACACCACTCATATTGAAGTTCTGTAAACTGTGTCTTGGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp GCCAGCCCTTTTGCAAACTGGCTGGGCCTAGTCATCTaGTACAAAGTGGCAGAACCTGACGCTTTTGGGCTT +
Preference number: 3 (lower is better)
Translates to: ASPFANWLGLVI*YKVAEPDAFGL
Trigger: AAGCCCAAAAGCGTCAGGTTCTGCCACTTTGTACCAGATGACTAGGCCCAGCCAGTTTGCAAAAGGGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp ACAGTGCCTGCTCCACTCTTGAGGCTGCTACCGATGTaGCATGGACGGAGCCTCTTTTCTATTATGGACTGC +
Preference number: 3 (lower is better)
Translates to: TVPAPLLRLLPM*HGRSLFSIMDC
Trigger: GCAGTCCATAATAGAAAAGAGGCTCCGTCCATGCCACATCGGTAGCAGCCTCAAGAGTGGAGCAGGCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR CCA 72 bp TTGGGAAGAGGTTGGCAGCTTCTTGGGTACAGGCTGTaGCTTCTGCAGGCTTCCCGATGCCGATATAGACTT +
Preference number: 3 (lower is better)
Translates to: LGRGWQLLGYRL*LLQASRCRYRL
Trigger: AAGTCTATATCGGCATCGGGAAGCCTGCAGAAGCCACAGCCTGTACCCAAGAAGCTGCCAACCTCTTCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR CCA 72 bp GCATGTAGAGGACATTGTGGGACATTGGGAAGAGGTTaGCAGCTTCTTGGGTACAGGCTGTGGCTTCTGCAG +
Preference number: 3 (lower is better)
Translates to: ACRGHCGTLGRG*QLLGYRLWLLQ
Trigger: CTGCAGAAGCCACAGCCTGTACCCAAGAAGCTGCCAACCTCTTCCCAATGTCCCACAATGTCCTCTACATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR-3UTR CAA 90 bp TCACCAGGAAACCCTATTGTCCTCAGGGGGTCAAGGGCCAAACAGCAGAAGATGTGTAGAGATAGGGTCTaGCTCTCTCATGCAGGCTGG +
Preference number: 3 (lower is better)
Translates to: SPGNPIVLRGSRAKQQKMCRDRV*LSHAGW
Trigger: CCAGCCTGCATGAGAGAGCAAGACCCTATCTCTACA...CATCTTCTGCTGTTTGGCCCTTGACCCCCTGAGGACAATAGGGTTTCCTGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 72 bp CTGCCCCAGGTCCTACATTGCAAATTCCATGACTTATaGCCACTCAAAGCCACAAGTGCTGCCTGGCAGGGT +
Preference number: 3 (lower is better)
Translates to: LPQVLHCKFHDL*PLKATSAAWQG
Trigger: ACCCTGCCAGGCAGCACTTGTGGCTTTGAGTGGTCATAAGTCATGGAATTTGCAATGTAGGACCTGGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 72 bp TCAGAGGCTCCACAGGCATTTTGTATTCAACCTGCCTaGAAGCAGACTCCTGCCTTCTCCTCTCCTCCCCAA +
Preference number: 3 (lower is better)
Translates to: SEAPQAFCIQPA*KQTPAFSSPPQ
Trigger: TTGGGGAGGAGAGGAGAAGGCAGGAGTCTGCTTTCAGGCAGGTTGAATACAAAATGCCTGTGGAGCCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp TCCCTGGCTTCATCTTTCTCCATGCGTCACCCCACCTaGCATACTCCTCATCTGTCTGTTTCCTTCTACCAG +
Preference number: 3 (lower is better)
Translates to: SLASSFSMRHPT*HTPHLSVSFYQ
Trigger: CTGGTAGAAGGAAACAGACAGATGAGGAGTATGGCAGGTGGGGTGACGCATGGAGAAAGATGAAGCCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp ACTCGTCACCACTACCTGGAGATTCACCCATGTTGCTaGAGGCACCAAGCCCCTCATATGGACAGATCACAA +
Preference number: 3 (lower is better)
Translates to: TRHHYLEIHPCC*RHQAPHMDRSQ
Trigger: TTGTGATCTGTCCATATGAGGGGCTTGGTGCCTGCAGCAACATGGGTGAATCTCCAGGTAGTGGTGACGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp TCAACTCGTCACCACTACCTGGAGATTCACCCATGTTaGTGCAGGCACCAAGCCCCTCATATGGACAGATCA +
Preference number: 3 (lower is better)
Translates to: STRHHYLEIHPC*CRHQAPHMDRS
Trigger: TGATCTGTCCATATGAGGGGCTTGGTGCCTGCAGCAACATGGGTGAATCTCCAGGTAGTGGTGACGAGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CAA 90 bp CTTACAGAGGTGTCCCCGACCAGCCAATCTAAAGTAACCCTCCCCCTGTCACTTCTGACCTCTTCCTCTTaGTCTATGCTTGTCCCGAAG +
Preference number: 3 (lower is better)
Translates to: LTEVSPTSQSKVTLPLSLLTSSS*SMLVPK
Trigger: CTTCGGGACAAGCATAGACAAAGAGGAAGAGGTCAG...AAGTGACAGGGGGAGGGTTACTTTAGATTGGCTGGTCGGGGACACCTCTGTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CAA 90 bp CCTATTTCCACATCCTTCTCTCTGAATGCAAGTCACCAAGTCCAGCCCACACTCCTCTGGTTCCGGATCTaGCTGTCTACTCTGTGGGAT +
Preference number: 3 (lower is better)
Translates to: PISTSFSLNASHQVQPTLLWFRI*LSTLWD
Trigger: ATCCCACAGAGTAGACAGCAAGATCCGGAACCAGAG...GAGTGTGGGCTGGACTTGGTGACTTGCATTCAGAGAGAAGGATGTGGAAATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CAA 90 bp GCCAAGCACACCCCTGAGAAACTGGAAAGGGCAAAGTTTGATGTCTTTCCTAGTCTGGAGGAGTCTGGGTaGCTCCATGTGATCACAGAC +
Preference number: 3 (lower is better)
Translates to: AKHTPEKLERAKFDVFPSLEESG*LHVITD
Trigger: GTCTGTGATCACATGGAGCAACCCAGACTCCTCCAG...ACTAGGAAAGACATCAAACTTTGCCCTTTCCAGTTTCTCAGGGGTGTGCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 72 bp CGGATGAATGGATGGATGGATGGATGGACGGATGGATaGATGTCCTTAGTTGGGAAAGGCTCAGCAGGTCAG +
Preference number: 3 (lower is better)
Translates to: RMNGWMDGWTDG*MSLVGKGSAGQ
Trigger: CTGACCTGCTGAGCCTTTCCCAACTAAGGACATTCATCCATCCGTCCATCCATCCATCCATCCATTCATCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 72 bp TACAGTGCCCAAGACACAGTTTACAGAACTTCAATATaGGTGGTGTCCCCTCACTGGGCAATGCCCACCCTG +
Preference number: 3 (lower is better)
Translates to: YSAQDTVYRTSI*VVSPHWAMPTL
Trigger: CAGGGTGGGCATTGCCCAGTGAGGGGACACCACTCATATTGAAGTTCTGTAAACTGTGTCTTGGGCACTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp CTCCAATCAGGGCAAGCTGCCACCACACTGAGTACCTaGCCCAGGTCCTACATTGCAAATTCCATGACTTAT +
Preference number: 3 (lower is better)
Translates to: LQSGQAATTLST*PRSYIANSMTY
Trigger: ATAAGTCATGGAATTTGCAATGTAGGACCTGGGGCAGGTACTCAGTGTGGTGGCAGCTTGCCCTGATTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp GGTACAAAGTGGCAGAACCTGACGCTTTTGGGCTTCTaGTCACCATCCCTCTTAAAGGTGAAGAAGCCCAGT +
Preference number: 3 (lower is better)
Translates to: GTKWQNLTLLGF*SPSLLKVKKPS
Trigger: ACTGGGCTTCTTCACCTTTAAGAGGGATGGTGAGCAGAAGCCCAAAAGCGTCAGGTTCTGCCACTTTGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp TGGACGGATGAATGGATGGATGGATGGATGGACGGATaGATGAATGTCCTTAGTTGGGAAAGGCTCAGCAGG +
Preference number: 3 (lower is better)
Translates to: WTDEWMDGWMDG*MNVLSWERLSR
Trigger: CCTGCTGAGCCTTTCCCAACTAAGGACATTCATCCATCCGTCCATCCATCCATCCATCCATTCATCCGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp CCTCTTAAAGGTGAAGAAGCCCAGTGTCCTCCAGGGTaGGCACCTTCTTGTCACTCAATGTCACTGTCTTAC +
Preference number: 3 (lower is better)
Translates to: PLKGEEAQCPPG*APSCHSMSLSY
Trigger: GTAAGACAGTGACATTGAGTGACAAGAAGGTGCCCACCCTGGAGGACACTGGGCTTCTTCACCTTTAAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 72 bp TGCACTAAGCAAGATGGGAAACTGTATGGATTCCTATaGTGGAAAAATCTCGGGCCGCAGTGCTCCAGCGGT +
Preference number: 3 (lower is better)
Translates to: CTKQDGKLYGFL*WKNLGPQCSSG
Trigger: ACCGCTGGAGCACTGCGGCCCGAGATTTTTCCATCATAGGAATCCATACAGTTTCCCATCTTGCTTAGTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 72 bp TTCACACGACTCATCACTGGGAATGCTGACCTTCATTaGCTGGTGAAGGTGATGTCCTGCCAGGTTTCTCTG +
Preference number: 3 (lower is better)
Translates to: FTRLITGNADLH*LVKVMSCQVSL
Trigger: CAGAGAAACCTGGCAGGACATCACCTTCACCAGTCAATGAAGGTCAGCATTCCCAGTGATGAGTCGTGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp CTTCATTTCTATACAGGAGCTCTGTCCATCTGCCAGTaGAGACAGGCACAGTCCAGATCCAAAGGACAAGCT +
Preference number: 3 (lower is better)
Translates to: LHFYTGALSICQ*RQAQSRSKGQA
Trigger: AGCTTGTCCTTTGGATCTGGACTGTGCCTGTCTGCACTGGCAGATGGACAGAGCTCCTGTATAGAAATGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp AACTGGCTTCATTTCTATACAGGAGCTCTGTCCATCTaGCAGTGCAGACAGGCACAGTCCAGATCCAAAGGA +
Preference number: 3 (lower is better)
Translates to: NWLHFYTGALSI*QCRQAQSRSKG
Trigger: TCCTTTGGATCTGGACTGTGCCTGTCTGCACTGGCAGATGGACAGAGCTCCTGTATAGAAATGAAGCCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp GTCAGCAGTGCCTCGTCCGGGCCTCGGCAGAGTGACTaGAACTTCACTTTGGAAAACAGTAGTATGAAATTT +
Preference number: 3 (lower is better)
Translates to: VSSASSGPRQSD*NFTLENSSMKF
Trigger: AAATTTCATACTACTGTTTTCCAAAGTGAAGTTGCAGTCACTCTGCCGAGGCCCGGACGAGGCACTGCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555239.5
3UTR CCA 72 bp GTTTCTCTCTGGTTCCGGATCTTGCTGTCTACTCTGTaGGATTCGGACTTTGGCTCAAACACCTCTACACCT +
Preference number: 3 (lower is better)
Translates to: VSLWFRILLSTL*DSDFGSNTSTP
Trigger: AGGTGTAGAGGTGTTTGAGCCAAAGTCCGAATCCCACAGAGTAGACAGCAAGATCCGGAACCAGAGAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp CTGTCTGTTTCCTTCTACCAGAAGGTAGGTCCTAAGTaGATGCAGCATCTGTGTCACACATTGCTGTGCCCT +
Preference number: 3 (lower is better)
Translates to: LSVSFYQKVGPK*MQHLCHTLLCP
Trigger: AGGGCACAGCAATGTGTGACACAGATGCTGCATCCACTTAGGACCTACCTTCTGGTAGAAGGAAACAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp ATGGATTCTGGAGTCAGGCAACCTGGGTTCAAGGCCTaGTGTAGTATTACCCAAACTTGGGCAAGTTTGTTC +
Preference number: 3 (lower is better)
Translates to: MDSGVRQPGFKA*CSITQTWASLF
Trigger: GAACAAACTTGCCCAAGTTTGGGTAATACTACAGCAGGCCTTGAACCCAGGTTGCCTGACTCCAGAATCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CAA 90 bp CCAGGGTGGGCACCTTCTTGTCACTCAATGTCACTGTCTTACAGAGGTGTCCCCGATTTGAGATGCGATTaGGGTAGAAAAGACAAGATT +
Preference number: 3 (lower is better)
Translates to: PGWAPSCHSMSLSYRGVPDLRCD*GRKDKI
Trigger: AATCTTGTCTTTTCTACCCAAATCGCATCTCAAATC...GGGGACACCTCTGTAAGACAGTGACATTGAGTGACAAGAAGGTGCCCACCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR-3UTR CAA 90 bp CAACCAGCGTGGCTTCGGCCAGTTAACAGACCACTTCTTGGAGTCATGAGGATTAAGTTGATCCCCTATTaGTACATTACAGGATGCTCT +
Preference number: 3 (lower is better)
Translates to: QPAWLRPVNRPLLGVMRIKLIPY*YITGCS
Trigger: AGAGCATCCTGTAATGTACAAATAGGGGATCAACTT...AATCCTCATGACTCCAAGAAGTGGTCTGTTAACTGGCCGAAGCCACGCTGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 72 bp TGTGCTCGGCCATGTGCTTGTGTTTTACACACCCTCTaGATCTTTACAACCACCTTGTTCTCCCCATTTCAC +
Preference number: 3 (lower is better)
Translates to: CARPCACVLHTL*IFTTTLFSPFH
Trigger: GTGAAATGGGGAGAACAAGGTGGTTGTAAAGATTCAGAGGGTGTGTAAAACACAAGCACATGGCCGAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp GAACATGGCCATGAGCCAAGCACACCCCTGAGAAACTaGAAAGGGCAAAGTTTGATGTCTTTCCTAGTACTT +
Preference number: 3 (lower is better)
Translates to: EHGHEPSTPLRN*KGQSLMSFLVL
Trigger: AAGTACTAGGAAAGACATCAAACTTTGCCCTTTCCAGTTTCTCAGGGGTGTGCTTGGCTCATGGCCATGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp GGAGCCACCATGCCCAGCCAGTTTATGGTAATTTGCTaGAACCACAGGCAATTAATATACACTGTTAGCATG +
Preference number: 3 (lower is better)
Translates to: GATMPSQFMVIC*NHRQLIYTVSM
Trigger: CATGCTAACAGTGTATATTAATTGCCTGTGGTTGCAGCAAATTACCATAAACTGGCTGGGCATGGTGGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp GGAAATGTGCGTTGTTTTATTGGGTGCAGTGTATACTaGTCGGGTGATGGGTGCACCAAAATCTCACAAATC +
Preference number: 3 (lower is better)
Translates to: GNVRCFIGCSVY*SGDGCTKISQI
Trigger: GATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAGTATACACTGCACCCAATAAAACAACGCACATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp ACATGTAAGACAGGAAATGTGCGTTGTTTTATTGGGTaGAGTGTATACTGCTCGGGTGATGGGTGCACCAAA +
Preference number: 3 (lower is better)
Translates to: TCKTGNVRCFIG*SVYCSGDGCTK
Trigger: TTTGGTGCACCCATCACCCGAGCAGTATACACTGCACCCAATAAAACAACGCACATTTCCTGTCTTACATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 72 bp AATTACCTAGTCTCGGGTATGTCTTTATTAGCTGCATaGGGACGTACTAATACGGTGCCTTTCATCCAGGAC +
Preference number: 3 (lower is better)
Translates to: NYLVSGMSLLAA*GRTNTVPFIQD
Trigger: GTCCTGGATGAAAGGCACCGTATTAGTACGTCCTCATGCAGCTAATAAAGACATACCCGAGACTAGGTAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp ACTATGGTAAGTGAAATGATGGTCCCAAAAGATGCCTaGATCCTACTTTCTGGAACCTGTGAAGATGGTCAC +
Preference number: 3 (lower is better)
Translates to: TMVSEMMVPKDA*ILLSGTCEDGH
Trigger: GTGACCATCTTCACAGGTTCCAGAAAGTAGGATGCAGGCATCTTTTGGGACCATCATTTCACTTACCATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp GGTGGCTTCAACAATGAACTTAATTTCTCACAGTCCTaGAGGTTCAAAGAACAAAGCAAAGGTTCCAGCCCA +
Preference number: 3 (lower is better)
Translates to: GGFNNELNFSQS*RFKEQSKGSSP
Trigger: TGGGCTGGAACCTTTGCTTTGTTCTTTGAACCTCCAGGACTGTGAGAAATTAAGTTCATTGTTGAAGCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 72 bp AGTATTACCCAAACTTGGGCAAGTTTGTTCATCTTCTaGAGAGAGCTTCATTTCTCACCTGGACCTGTATCC +
Preference number: 3 (lower is better)
Translates to: SITQTWASLFIF*RELHFSPGPVS
Trigger: GGATACAGGTCCAGGTGAGAAATGAAGCTCTCTTCAGAAGATGAACAAACTTGCCCAAGTTTGGGTAATACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 72 bp ACTGCTTTTAGGCCAGAAATAAAGGCACATCTAGGTTaGGCTGGATTTCAGAGGGTGGAATCAACTCTTAAG +
Preference number: 3 (lower is better)
Translates to: TAFRPEIKAHLG*AGFQRVESTLK
Trigger: CTTAAGAGTTGATTCCACCCTCTGAAATCCAGCTCAACCTAGATGTGCCTTTATTTCTGGCCTAAAAGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR GCA 72 bp CCCTCCCCCTGTCACTTCAAATTTGCTCTAATCATCTaGCAAGCTGGTAATTATCTTATTTGTTTACCCCTC +
Preference number: 3 (lower is better)
Translates to: PSPCHFKFALII*QAGNYLICLPL
Trigger: GAGGGGTAAACAAATAAGATAATTACCAGCTTGGCAGATGATTAGAGCAAATTTGAAGTGACAGGGGGAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp AATTTAAAGTTGATCCCCTATTTGTACATTACAGGATaGTCTTCCCTCTTCACATGGTCTGGTCCTTGCTGG +
Preference number: 3 (lower is better)
Translates to: NLKLIPYLYITG*SSLFTWSGPCW
Trigger: CCAGCAAGGACCAGACCATGTGAAGAGGGAAGAGCATCCTGTAATGTACAAATAGGGGATCAACTTTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp TCATTGACAATAAAGAAAGGGTTAAACAGTCTGCAGTaGATCCATGTGAGGGGAGGTTATGCTGTCTCTAAG +
Preference number: 3 (lower is better)
Translates to: SLTIKKGLNSLQ*IHVRGGYAVSK
Trigger: CTTAGAGACAGCATAACCTCCCCTCACATGGATGCACTGCAGACTGTTTAACCCTTTCTTTATTGTCAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 72 bp TATTTGTGGCAATTTGTTGTAGCAGCAACAGGCAGCTaGTACAGTGGGTGTAGGTTTTACGATCACAAAAGA +
Preference number: 3 (lower is better)
Translates to: YLWQFVVAATGS*YSGCRFYDHKR
Trigger: TCTTTTGTGATCGTAAAACCTACACCCACTGTATCAGCTGCCTGTTGCTGCTACAACAAATTGCCACAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR TCA 72 bp AAGTTCATCGGTTTGGGTTTGTCTGATGTTTTCTCATaGTTACACTGGAGTTATGGGTTTGGGGGAAGAAGA +
Preference number: 3 (lower is better)
Translates to: KFIGLGLSDVFS*LHWSYGFGGRR
Trigger: TCTTCTTCCCCCAAACCCATAACTCCAGTGTAATCATGAGAAAACATCAGACAAACCCAAACCGATGAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR GCA 72 bp AGTGGGTGTAAGGTGGTATCTCTTGGAGTTTTGACTTaGATTTCCCTAGTGAGTAATGATGTTGAACATTTC +
Preference number: 3 (lower is better)
Translates to: SGCKVVSLGVLT*ISLVSNDVEHF
Trigger: GAAATGTTCAACATCATTACTCACTAGGGAAATGCAAGTCAAAACTCCAAGAGATACCACCTTACACCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp TTTGTTCATCTTCTGAAGAGAGCTTCATTTCTCACCTaGACCTGTATCCGTAATAACTGTATGCATATCATA +
Preference number: 3 (lower is better)
Translates to: FVHLLKRASFLT*TCIRNNCMHII
Trigger: TATGATATGCATACAGTTATTACGGATACAGGTCCAGGTGAGAAATGAAGCTCTCTTCAGAAGATGAACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CCA 72 bp GTATTGGTCAGGTATTTTGTAGAAAGTTCATCGGTTTaGGTTTGTCTGATGTTTTCTCATGATTACACTGGA +
Preference number: 3 (lower is better)
Translates to: VLVRYFVESSSV*VCLMFSHDYTG
Trigger: TCCAGTGTAATCATGAGAAAACATCAGACAAACCCAAACCGATGAACTTTCTACAAAATACCTGACCAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CTGTGCCAGCGTCATCCAGGGGTGCAGCGGGCCCTGCTTAGGGGCACTGCTCTGGCACGGCGGGGCTGCTaGCCTCCAGCTCCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: LCQRHPGVQRALLRGTALARRGC*PPAPRL
Trigger: CAGCCTTGGAGCTGGAGGCCAGCAGCCCCGCCGTGC...CAGAGCAGTGCCCCTAAGCAGGGCCCGCTGCACCCCTGGATGACGCTGGCACAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR CAA 72 bp CAGCCCATCTGGGTTCCTGTGAGGCTCCCTCCTGGCTaGCGGGTGGCCGCCTTCTCCGTGTGTCCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: QPIWVPVRLPPG*RVAAFSVCPGV
Trigger: CACGCCAGGACACACGGAGAAGGCGGCCACCCGCAAGCCAGGAGGGAGCCTCACAGGAACCCAGATGGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GAACACTCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCAGGCCTGAGCGGCAGGTaGGGCTGGCAGGCGCCTGCT +
Preference number: 4 (lower is better)
Translates to: EHSSLASVWQIHPLGAMAGLSGR*GWQAPA
Trigger: AGCAGGCGCCTGCCAGCCTCACCTGCCGCTCAGGCC...TGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGAGTGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR TCA 90 bp ATGATGACTGTGTGGCCGCCGGGGAGATGCGTGGGGCCATCTGGAGGAGTCTGGCCACCCTGTCGGCCTTaGGAGGTGGTGGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: MMTVWPPGRCVGPSGGVWPPCRP*EVVGEE
Trigger: CTCCTCCCCCACCACCTCTCAAGGCCGACAGGGTGG...CCAGACTCCTCCAGATGGCCCCACGCATCTCCCCGGCGGCCACACAGTCATCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GCAGGCAGAGAGTCTGGGCCCGCAATGATGACTGTGTGGCCGCCGGGGAGATGCGCCGCGCCTCGTCCATaGTTCCCCGGAGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: AGRESGPAMMTVWPPGRCAAPRP*FPGAQQ
Trigger: TTGCTGAGCTCCGGGGAAGCATGGACGAGGCGCGGC...GCATCTCCCCGGCGGCCACACAGTCATCATTGCGGGCCCAGACTCTCTGCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp ATGATGACTGTGTGGCCGCCGGGGAGATGCGTGGGGCCATCTGGAGGAGTCTGGTGTGGGTGGCCCGGATaGTCAGCGGGAGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: MMTVWPPGRCVGPSGGVWCGWPG*SAGAAG
Trigger: GCCAGCAGCTCCCGCTGACCATCCGGGCCACCCACA...CCAGACTCCTCCAGATGGCCCCACGCATCTCCCCGGCGGCCACACAGTCATCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CAA 72 bp ACTCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTaGGGGCGATGGCACAAGCCCTGGTGCCCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TRPWPQCGRFIP*GRWHKPWCPAG
Trigger: CCCTGCCGGGCACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR TCA 90 bp GGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGGCCTGAGCGGCAGGTaGGGCTGGCAGGCGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GVGLVGSLWPTEHSSLASGLSGR*GWQAPA
Trigger: AGCAGGCGCCTGCCAGCCTCACCTGCCGCTCAGGCC...TGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR TCA 90 bp TCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTGGCCTGAGCGGCAGGTaGGGCTGGCAGGCGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SGLVWLVHCGPLNTRPWPGLSGR*GWQAPA
Trigger: AGCAGGCGCCTGCCAGCCTCACCTGCCGCTCAGGCC...AGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp TGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGCAGGCTGGCAGGCGCCTaGTCAGAGCACGCGGGGGAT +
Preference number: 4 (lower is better)
Translates to: WPQCGRFIPLGRWHKPWCRLAGA*SEHAGD
Trigger: ATCCCCCGCGTGCTCTGAGCAGGCGCCTGCCAGCCT...GCACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR GCA 90 bp TCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTCTCCCTCCTTGGCTaGCCCCTAGCCCGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: SSLASVWQIHPLGAMAQALSLLG*PLARLP
Trigger: AGGCAGGCGGGCTAGGGGGCAGCCAAGGAGGGAGAG...GGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GCAATGGCCCTGGACTATCCAGGGGGCCCAGAGCAACCAGCAGAGTCCTTAGAGCAGTGCGGCTGCTACTaGCCGCCTCCCCCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: AMALDYPGGPEQPAESLEQCGCY*PPPPED
Trigger: GTCCTCCGGGGGAGGCGGGCAGTAGCAGCCGCACTG...CTCTAAGGACTCTGCTGGTTGCTCTGGGCCCCCTGGATAGTCCAGGGCCATTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp TGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGCGCAGGGGCCGAGCGCTaGGAGGGTATGGGGGCATTG +
Preference number: 4 (lower is better)
Translates to: WPQCGRFIPLGRWHKPWCAGAER*EGMGAL
Trigger: CAATGCCCCCATACCCTCCCAGCGCTCGGCCCCTGC...GCACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp CGTAGCCGCCGCATCGTTGCCCTGAGCTTGGAGGACCTCGCCCAGCCCGTTCCATCACGTGGGTGGGGCTaGTGGCTAAGGCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: RSRRIVALSLEDLAQPVPSRGWG*WLRPLH
Trigger: ATGAAGAGGCCTTAGCCATCAGCCCCACCCACGTGA...TGGAACGGGCTGGGCGAGGTCCTCCAAGCTCAGGGCAACGATGCGGCGGCTACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS-3UTR TCA 90 bp GGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACGGCCTGAGCGGCAGGTaGGGCTGGCAGGCGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GESDDSGLVWLVHCGPLNGLSGR*GWQAPA
Trigger: AGCAGGCGCCTGCCAGCCTCACCTGCCGCTCAGGCC...GTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR TCA 90 bp TGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGCGGCGGGAGGGCTGCTTaGGTCCAGGAGTTCAGGACC +
Preference number: 4 (lower is better)
Translates to: WPQCGRFIPLGRWHKPWCGGRAA*VQEFRT
Trigger: GGTCCTGAACTCCTGGACTCAAGCAGCCCTCCCGCC...GCACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp CTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGCACGCTCCCCTGCTGTaGGCCTCCAATCCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LASVWQIHPLGAMAQALVHAPLL*ASNPLA
Trigger: AGCCAGGGGATTGGAGGCTCACAGCAGGGGAGCGTG...CACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCGCCGCGCCTCGTCCATaGTTCCCCGGAGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: SSLASVWQIHPLGAMAQAAAPRP*FPGAQQ
Trigger: TTGCTGAGCTCCGGGGAAGCATGGACGAGGCGCGGC...GGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR GCA 90 bp TCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCGGGCCAGTCGCTGCATaGTCTTCACGTGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: SSLASVWQIHPLGAMAQAGPVAA*SSRGWG
Trigger: GCCCCACCCACGTGAAGAGCATGCAGCGACTGGCCC...GGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR GCA 90 bp GAACACTCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCATCACTGAGGAGTGGGTaGCCCGTCCCCAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: EHSSLASVWQIHPLGAMASLRSG*PVPRAP
Trigger: GGGAGCCCTGGGGACGGGGCACCCACTCCTCAGTGA...TGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGAGTGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGCGAAACCCTGACCTCCTaGCATGCCCGGGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: WPQCGRFIPLGRWHKPWCETLTS*HARGRS
Trigger: GCTCCTCCCCCGGGCATGGCAGGAGGTCAGGGTTTC...GCACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCAGCCCCGTCAGGCCCATaGCTCCCAGCCCCGCATCCC +
Preference number: 4 (lower is better)
Translates to: AHGESDDSGLVWLVHCGPAPSGP*LPAPHP
Trigger: GGGATGCGGGGCTGGGAGCCATGGGCCTGACGGGGC...TGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGGGTGCAGAGCTGGAGTaGGTCCCCCACGGTGTGACC +
Preference number: 4 (lower is better)
Translates to: LASVWQIHPLGAMAQALVGAELE*VPHGVT
Trigger: GGTCACACCGTGGGGGACCCACTCCAGCTCTGCACC...CACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp ATGATGACTGTGTGGCCGCCGGGGAGATGCGTGGGGCCATCTGGAGGAGTCTGGGCCCAGAAGGCAGGCTaGGCAGAGGTGACTGTCCTC +
Preference number: 4 (lower is better)
Translates to: MMTVWPPGRCVGPSGGVWAQKAG*AEVTVL
Trigger: GAGGACAGTCACCTCTGCCCAGCCTGCCTTCTGGGC...CCAGACTCCTCCAGATGGCCCCACGCATCTCCCCGGCGGCCACACAGTCATCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp TCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCTGGCCGACAGCTGCTTaGCGAGCTCAGGGATCCGCT +
Preference number: 4 (lower is better)
Translates to: SSLASVWQIHPLGAMAQAWPTAA*RAQGSA
Trigger: AGCGGATCCCTGAGCTCGTCAAGCAGCTGTCGGCCA...GGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GCAGGCAGAGAGTCTGGGCCCGCAATGATGACTGTGTGGCCGCCGGGGAGATGCTCACGTGGGTGGGGCTaGTGGCTAAGGCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: AGRESGPAMMTVWPPGRCSRGWG*WLRPLH
Trigger: ATGAAGAGGCCTTAGCCATCAGCCCCACCCACGTGA...GCATCTCCCCGGCGGCCACACAGTCATCATTGCGGGCCCAGACTCTCTGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp TTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCGCCGCATCGTTGCCCTaGGCTTGGAGGACCTCGCCC +
Preference number: 4 (lower is better)
Translates to: FGVGLVGSLWPTEHSSLAAASLP*AWRTSP
Trigger: GGGCGAGGTCCTCCAAGCTCAGGGCAACGATGCGGC...GGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR TCA 90 bp CTACACCCCTTCCCTGGCTTCATCTTTCTCCATGCGTCACCCCACCTGCCATACGCCCGCCTGCCTCAGTaGGCCAGAGAGGTCGTGCCC +
Preference number: 4 (lower is better)
Translates to: LHPFPGFIFLHASPHLPYARLPQ*AREVVP
Trigger: GGGCACGACCTCTCTGGCTCACTGAGGCAGGCGGGC...GTATGGCAGGTGGGGTGACGCATGGAGAAAGATGAAGCCAGGGAAGGGGTGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GCAATGGCCCTGGACTATCCAGGGGGCCCAGAGCAACCAGCAGAGTCCTTAGAGCAGCCATGCCCATGCTaGCCAGGCCCCTCACCTCCT +
Preference number: 4 (lower is better)
Translates to: AMALDYPGGPEQPAESLEQPCPC*PGPSPP
Trigger: AGGAGGTGAGGGGCCTGGTCAGCATGGGCATGGCTG...CTCTAAGGACTCTGCTGGTTGCTCTGGGCCCCCTGGATAGTCCAGGGCCATTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGCCGGCGGTCAGATGCTTaGGGACCTCAGTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: WPQCGRFIPLGRWHKPWCRRSDA*GPQSAG
Trigger: CCCAGCTGACTGAGGTCCGCAAGCATCTGACCGCCG...GCACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCGCTGTCGAGTTCACCTaGACCGCGTCCCGGAGGATC +
Preference number: 4 (lower is better)
Translates to: SSLASVWQIHPLGAMAQAAVEFT*TASRRI
Trigger: GATCCTCCGGGACGCGGTGCAGGTGAACTCGACAGC...GGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR GCA 90 bp TCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTAGGCTGGCAGGCGCCTaGTCAGAGCACGCGGGGGAT +
Preference number: 4 (lower is better)
Translates to: SGLVWLVHCGPLNTRPWPRLAGA*SEHAGD
Trigger: ATCCCCCGCGTGCTCTGAGCAGGCGCCTGCCAGCCT...AGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp GGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGAGGCTGGCAGGCGCCTaGTCAGAGCACGCGGGGGAT +
Preference number: 4 (lower is better)
Translates to: GLVWLVHCGPLNTRPWPQRLAGA*SEHAGD
Trigger: ATCCCCCGCGTGCTCTGAGCAGGCGCCTGCCAGCCT...CTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp GGTACTGCTGAATGGCAGGCTAAGCTCAGGCTGGAAACCCTGACCTCCTGCCATCCAGCCCCCGCGCCCTaGAGGGCTGATACGCACAGG +
Preference number: 4 (lower is better)
Translates to: GTAEWQAKLRLETLTSCHPAPAP*RADTHR
Trigger: CCTGTGCGTATCAGCCCTGCAGGGCGCGGGGGCTGG...ATGGCAGGAGGTCAGGGTTTCCAGCCTGAGCTTAGCCTGCCATTCAGCAGTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp ACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCGGCTCCCTCCTGGCTTaGGGGTGGCCGCCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: THMARAMIRGWFGWFTVAGSLLA*GWPPSP
Trigger: CGGAGAAGGCGGCCACCCGCAAGCCAGGAGGGAGCC...GGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TGGAGTAGGCAGGATGGACAGGGCAAGCAGACGCTAGGGGAGGGATGGGAGCAGAGACACGCCCACCTGTaGACGAGCATGCACCTCCCC +
Preference number: 4 (lower is better)
Translates to: WSRQDGQGKQTLGEGWEQRHAHL*TSMHLP
Trigger: GGGGAGGTGCATGCTCGTGCACAGGTGGGCGTGTCT...CTGCTCCCATCCCTCCCCTAGCGTCTGCTTGCCCTGTCCATCCTGCCTACTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGGCCGCCGGGGAGATaGGTGGGGCCATCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: GLVWLVHCGPLNTRPWPQWPPGR*VGPSGG
Trigger: TCCTCCAGATGGCCCCACGCATCTCCCCGGCGGCCA...CTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GAACACTCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCAGCAGGAAGGCCTCACTaGCACCTGGGTGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: EHSSLASVWQIHPLGAMAAGRPH*HLGGWR
Trigger: CCTCCACCCACCCAGGTGGCAGTGAGGCCTTCCTGC...TGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGAGTGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACCTGGGCCCTGCAGCTaGCCAGCCCTGGGGGTTAGG +
Preference number: 4 (lower is better)
Translates to: AHGESDDSGLVWLVHCGPPGPCS*PALGVR
Trigger: CCTAACCCCCAGGGCTGGGCAGCTGCAGGGCCCAGG...TGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GCTCCTAGGAGAGTAGGTGGCCAGGTCCCGATGCAGGCTCCAGCCCAGCAGGCCCCTCTGGGATCTGTCTaGAGATGGCAAGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: APRRVGGQVPMQAPAQQAPLGSV*RWQAAE
Trigger: CTCTGCAGCTTGCCATCTCCAGACAGATCCCAGAGG...GGCCTGCTGGGCTGGAGCCTGCATCGGGACCTGGCCACCTACTCTCCTAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGGCACGGCGGGGCTGCTaGCCTCCAGCTCCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: HGESDDSGLVWLVHCGPLARRGC*PPAPRL
Trigger: CAGCCTTGGAGCTGGAGGCCAGCAGCCCCGCCGTGC...CAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CCA 90 bp ACGTGGGTGGGGCTGATGGCTAAGGCCTCTTCATACCACCGCCGCGCCTCGTCCGCAGATTCATCCCCTTaGGGCGATGGCACAAGCCCT +
Preference number: 4 (lower is better)
Translates to: TWVGLMAKASSYHRRASSADSSP*GDGTSP
Trigger: AGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGC...GGACGAGGCGCGGCGGTGGTATGAAGAGGCCTTAGCCATCAGCCCCACCCACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS-3UTR CCA 90 bp GGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGCGCTCCCGCATGGGATaGCAGAGCCCAGCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: GLVWLVHCGPLNTRPWPQRSRMG*QSPALC
Trigger: GCACAGGGCTGGGCTCTGCCATCCCATGCGGGAGCG...CTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GCTCCTAGGAGAGTAGGTGGCCAGGTCCCGATGCAGGCTCCAGCCCAGCAGGCCTCTGAGGTGAGGGCCTaGCAGAGAAGGTCTGGTACA +
Preference number: 4 (lower is better)
Translates to: APRRVGGQVPMQAPAQQASEVRA*QRRSGT
Trigger: TGTACCAGACCTTCTCTGCCAGGCCCTCACCTCAGA...GGCCTGCTGGGCTGGAGCCTGCATCGGGACCTGGCCACCTACTCTCCTAGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GCAATGGCCCTGGACTATCCAGGGGGCCCAGAGCAACCAGCAGAGTCCTTAGAGCTCCTGGCTTGCGGGTaGCCGCCTTCTCCGTGTGTC +
Preference number: 4 (lower is better)
Translates to: AMALDYPGGPEQPAESLELLACG*PPSPCV
Trigger: GACACACGGAGAAGGCGGCCACCCGCAAGCCAGGAG...CTCTAAGGACTCTGCTGGTTGCTCTGGGCCCCCTGGATAGTCCAGGGCCATTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp TTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTAGAGAGGGGGCCGAGTaGCAGGGGCCGAGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: LVWLVHCGPLNTRPWPQCREGAE*QGPSAG
Trigger: CCCAGCGCTCGGCCCCTGCCACTCGGCCCCCTCTCT...ACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp TCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCGTGGTGTCCCCTCACTaGGCAATGCCCACCCTGTCG +
Preference number: 4 (lower is better)
Translates to: SSLASVWQIHPLGAMAQAVVSPH*AMPTLS
Trigger: CGACAGGGTGGGCATTGCCCAGTGAGGGGACACCAC...GGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GCTCCTAGGAGAGTAGGTGGCCAGGTCCCGATGCAGGCTCCAGCCCAGCAGGCCTTTTCTGTTCCTATCTaGCTGCAGCGTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: APRRVGGQVPMQAPAQQAFSVPI*LQRGQG
Trigger: CCCCTGCCCACGCTGCAGCCAGATAGGAACAGAAAA...GGCCTGCTGGGCTGGAGCCTGCATCGGGACCTGGCCACCTACTCTCCTAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGGGTGGGGGCTGTGGGTaGCCCGGATGGTCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: VGLVGSLWPTEHSSLASVGGGCG*PGWSAG
Trigger: TCCCGCTGACCATCCGGGCCACCCACAGCCCCCACC...CACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GAACACTCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCATCCTCAGGCCTTGGCTaGACCCAGGGCCCGAGGATG +
Preference number: 4 (lower is better)
Translates to: EHSSLASVWQIHPLGAMASSGLG*TQGPRM
Trigger: CATCCTCGGGCCCTGGGTCCAGCCAAGGCCTGAGGA...TGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGAGTGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GCAATGGCCCTGGACTATCCAGGGGGCCCAGAGCAACCAGCAGAGTCCTTAGAGCACCGCCTCAGGCAGTaGCGGATGGGAGCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: AMALDYPGGPEQPAESLEHRLRQ*RMGASC
Trigger: ACAGGAGGCTCCCATCCGCCACTGCCTGAGGCGGTG...CTCTAAGGACTCTGCTGGTTGCTCTGGGCCCCCTGGATAGTCCAGGGCCATTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GCAGGCAGAGAGTCTGGGCCCGCAATGATGACTGTGTGGCCGCCGGGGAGATGCGAGCCTCCAATCCCCTaGCTGGCTAAACAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: AGRESGPAMMTVWPPGRCEPPIP*LAKQQH
Trigger: GTGCTGCTGTTTAGCCAGCCAGGGGATTGGAGGCTC...GCATCTCCCCGGCGGCCACACAGTCATCATTGCGGGCCCAGACTCTCTGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp TCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCTTCACTGTGGCCCACTaGACACTCGTCCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SSLASVWQIHPLGAMAQAFTVAH*TLVPGL
Trigger: GAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAA...GGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR TCA 90 bp GAACACTCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCAACCCTCTGTGGCCCATaGGTGCAGGAGGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: EHSSLASVWQIHPLGAMATLCGP*VQEAAW
Trigger: CCAAGCAGCCTCCTGCACTCATGGGCCACAGAGGGT...TGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGAGTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GCTCCTAGGAGAGTAGGTGGCCAGGTCCCGATGCAGGCTCCAGCCCAGCAGGCCTTCCAGGCAAGGGCTTaGGAAGCCATCAGGGGTTTA +
Preference number: 4 (lower is better)
Translates to: APRRVGGQVPMQAPAQQAFQARA*EAIRGL
Trigger: TAAACCCCTGATGGCTTCTCAAGCCCTTGCCTGGAA...GGCCTGCTGGGCTGGAGCCTGCATCGGGACCTGGCCACCTACTCTCCTAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp TGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGCCAGAGGAAGGAAAGGTaGCGTGAGGTGGCCACGAGC +
Preference number: 4 (lower is better)
Translates to: WPQCGRFIPLGRWHKPWCQRKER*REVATS
Trigger: GCTCGTGGCCACCTCACGTCACCTTTCCTTCCTCTG...GCACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GCAATGGCCCTGGACTATCCAGGGGGCCCAGAGCAACCAGCAGAGTCCTTAGAGGGAAACAGGAATGGGTaGCAGCCCCACGCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: AMALDYPGGPEQPAESLEGNRNG*QPHAPL
Trigger: CAGGGGAGCGTGGGGCTGTCACCCATTCCTGTTTCC...CTCTAAGGACTCTGCTGGTTGCTCTGGGCCCCCTGGATAGTCCAGGGCCATTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp CTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGTGCAGGTGGGGAGACTaGGGCCAGGCTGTACTCATC +
Preference number: 4 (lower is better)
Translates to: LASVWQIHPLGAMAQALVCRWGD*GQAVLI
Trigger: GATGAGTACAGCCTGGCCTCAGTCTCCCCACCTGCA...CACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGCGAAGCGTCAGTGGCCTaGAGACTGTACGTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: WPQCGRFIPLGRWHKPWCEASVA*RLYVSP
Trigger: GGGGCTCACGTACAGTCTGCAGGCCACTGACGCTTC...GCACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000555005.5
CDS-3UTR GCA 90 bp CTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGCTTACAAGTCAGCAGTaGCTCGTCCGGGCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: LASVWQIHPLGAMAQALVLTSQQ*LVRASA
Trigger: TGCCGAGGCCCGGACGAGGCACTGCTGACTTGTAAG...CACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR GCA 90 bp CACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACGGGTGCAGCGGGCCCTaGTTAGGGGCACTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: HMARAMIRGWFGWFTVAHGCSGP*LGALLC
Trigger: GCAGAGCAGTGCCCCTAAGCAGGGCCCGCTGCACCC...GTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp ACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCGGGTGCAGCGGGCCCTaGTTAGGGGCACTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: THMARAMIRGWFGWFTVAGCSGP*LGALLC
Trigger: GCAGAGCAGTGCCCCTAAGCAGGGCCCGCTGCACCC...GGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp TTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCAGCGTCATCCAGGGGTaGAGCGGGCCCTGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: FGVGLVGSLWPTEHSSLASVIQG*SGPCLG
Trigger: CCCTAAGCAGGGCCCGCTGCACCCCTGGATGACGCT...GGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp GGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGCCGCGCCTCGTCCATaGTTCCCCGGAGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: GVGLVGSLWPTEHSSLASAAPRP*FPGAQQ
Trigger: TTGCTGAGCTCCGGGGAAGCATGGACGAGGCGCGGC...TGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR GCA 90 bp CACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACAGGCTGGCAGGCGCCTaGTCAGAGCACGCGGGGGAT +
Preference number: 4 (lower is better)
Translates to: HMARAMIRGWFGWFTVAHRLAGA*SEHAGD
Trigger: ATCCCCCGCGTGCTCTGAGCAGGCGCCTGCCAGCCT...GTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp GCTCCTAGGAGAGTAGGTGGCCAGGTCCCGATGCAGGCTCCAGCCCAGCAGGCCCGTGCCCAGTTTGAATaGAGTCCTCTAGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: APRRVGGQVPMQAPAQQARAQFE*SPLGFR
Trigger: CCTGAAGCCTAGAGGACTGCATTCAAACTGGGCACG...GGCCTGCTGGGCTGGAGCCTGCATCGGGACCTGGCCACCTACTCTCCTAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGTCCTGCCCAGCCAGCTaGCTCCCCCTCAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: HGESDDSGLVWLVHCGPLSCPAS*LPLRGS
Trigger: GGAGCCTCTGAGGGGGAGGCAGCTGGCTGGGCAGGA...CAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGGTGGCCAGGTCCCGATaGAGGCTCCAGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VGLVGSLWPTEHSSLASVVARSR*RLQPSR
Trigger: CCTGCTGGGCTGGAGCCTGCATCGGGACCTGGCCAC...CACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGGGTAGGGCTGGGCTGTaGTCGGCCATGTGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: LASVWQIHPLGAMAQALVGRAGL*SAMCLC
Trigger: ACACAAGCACATGGCCGAGCACAGCCCAGCCCTACC...CACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GACCTCGTGGGCTGTCGAGTTCACCTGCACCGCGTCCCGGAGGATCTTCTCCGCGGATCTGTCTGGAGATaGCAAGCTGCAGAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: DLVGCRVHLHRVPEDLLRGSVWR*QAAEPG
Trigger: ACCTGGCTCTGCAGCTTGCCATCTCCAGACAGATCC...GCGGAGAAGATCCTCCGGGACGCGGTGCAGGTGAACTCGACAGCCCACGAGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS-3UTR CCA 90 bp CTGTGCCAGCGTCATCCAGGGGTGCAGCGGGCCCTGCTTAGGGGCACTGCTCTGAGGTTGGCAGCTTCTTaGGTACAGGCTGTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LCQRHPGVQRALLRGTALRLAAS*VQAVAS
Trigger: AGAAGCCACAGCCTGTACCCAAGAAGCTGCCAACCT...CAGAGCAGTGCCCCTAAGCAGGGCCCGCTGCACCCCTGGATGACGCTGGCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS-3UTR CCA 90 bp CTCCACCCCCAAGTCTCCTTGCCCCAGGCGCAATCACGGGTCTGCTTTCCCTCACCGTTCCAGACCTCGTaGGCTGTCGAGTTCACCTGC +
Preference number: 4 (lower is better)
Translates to: LHPQVSLPQAQSRVCFPSPFQTS*AVEFTC
Trigger: GCAGGTGAACTCGACAGCCCACGAGGTCTGGAACGG...TGAGGGAAAGCAGACCCGTGATTGCGCCTGGGGCAAGGAGACTTGGGGGTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp TCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCCGTTCCAGACCTCGTaGGCTGTCGAGTTCACCTGC +
Preference number: 4 (lower is better)
Translates to: SSLASVWQIHPLGAMAQAPFQTS*AVEFTC
Trigger: GCAGGTGAACTCGACAGCCCACGAGGTCTGGAACGG...GGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR CCA 90 bp GATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCGCACGGCGGGGCTGCTaGCCTCCAGCTCCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: DDSGLVWLVHCGPLNTRPARRGC*PPAPRL
Trigger: CAGCCTTGGAGCTGGAGGCCAGCAGCCCCGCCGTGC...GGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CCA 90 bp GGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAATCCCCTTGGGGCGATaGCACAAGCCCTGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: GVGLVGSLWPTEHSSLASIPLGR*HKPWCP
Trigger: CGGGCACCAGGGCTTGTGCCATCGCCCCAAGGGGAT...TGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CCA 90 bp GCTCCTAGGAGAGTAGGTGGCCAGGTCCCGATGCAGGCTCCAGCCCAGCAGGCCCCTACACCCCTTCCCTaGCTTCATCTTTCTCCATGC +
Preference number: 4 (lower is better)
Translates to: APRRVGGQVPMQAPAQQAPTPLP*LHLSPC
Trigger: GCATGGAGAAAGATGAAGCCAGGGAAGGGGTGTAGG...GGCCTGCTGGGCTGGAGCCTGCATCGGGACCTGGCCACCTACTCTCCTAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GCAGGCAGAGAGTCTGGGCCCGCAATGATGACTGTGTGGCCGCCGGGGAGATGCACTGCATCCCCAGCATaGCTCTGGTCAAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: AGRESGPAMMTVWPPGRCTASPA*LWSRSL
Trigger: CAGTGACCTTGACCAGAGCCATGCTGGGGATGCAGT...GCATCTCCCCGGCGGCCACACAGTCATCATTGCGGGCCCAGACTCTCTGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGCTCACTGAGGAGTaGGTGCCCCGTCCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: AHGESDDSGLVWLVHCGPLLTEE*VPRPQG
Trigger: GCCCTGGGGACGGGGCACCCACTCCTCAGTGAGCAG...TGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCACGCCGGGGAGATGCGTaGGGCCATCTGGAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: GVGLVGSLWPTEHSSLASRRGDA*GHLEES
Trigger: AGACTCCTCCAGATGGCCCCACGCATCTCCCCGGCG...TGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp TGGAGTAGGCAGGATGGACAGGGCAAGCAGACGCTAGGGGAGGGATGGGAGCAGACTCTGTCGCCCAGGTaGGAGTGCAATGGCGCCATC +
Preference number: 4 (lower is better)
Translates to: WSRQDGQGKQTLGEGWEQTLSPR*ECNGAI
Trigger: GATGGCGCCATTGCACTCCCACCTGGGCGACAGAGT...CTGCTCCCATCCCTCCCCTAGCGTCTGCTTGCCCTGTCCATCCTGCCTACTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGGTCATGCCCCTGGAGTaGCCTCGCACCGTCCATCCC +
Preference number: 4 (lower is better)
Translates to: GLVWLVHCGPLNTRPWPQVMPLE*PRTVHP
Trigger: GGGATGGACGGTGCGAGGCCACTCCAGGGGCATGAC...CTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CAA 72 bp CGGGGAGATGCGTGGGGCCATCTGGAGGAGTCTGGGTaGCTCCATGTGATCACAGACACGCCCACCTGTGCA +
Preference number: 4 (lower is better)
Translates to: RGDAWGHLEESG*LHVITDTPTCA
Trigger: TGCACAGGTGGGCGTGTCTGTGATCACATGGAGCAACCCAGACTCCTCCAGATGGCCCCACGCATCTCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp CGTAGCCGCCGCATCGTTGCCCTGAGCTTGGAGGACCTCGCCCAGCCCGTTCCAAAAAATGTTCTCTCCTaGGTAGACACGGGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: RSRRIVALSLEDLAQPVPKNVLS*VDTGSP
Trigger: CGGAGAGCCCGTGTCTACTCAGGAGAGAACATTTTT...TGGAACGGGCTGGGCGAGGTCCTCCAAGCTCAGGGCAACGATGCGGCGGCTACG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS-3UTR TCA 90 bp TTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTGCCGCATCGTTGCCCTaGGCTTGGAGGACCTCGCCC +
Preference number: 4 (lower is better)
Translates to: LVWLVHCGPLNTRPWPQCAASLP*AWRTSP
Trigger: GGGCGAGGTCCTCCAAGCTCAGGGCAACGATGCGGC...ACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR TCA 90 bp GATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCGCCGCATCGTTGCCCTaGGCTTGGAGGACCTCGCCC +
Preference number: 4 (lower is better)
Translates to: DDSGLVWLVHCGPLNTRPAASLP*AWRTSP
Trigger: GGGCGAGGTCCTCCAAGCTCAGGGCAACGATGCGGC...GGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR TCA 90 bp TGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGCCCCTACAGCTGTCCCTaGGAGACTGCAGATACCTGC +
Preference number: 4 (lower is better)
Translates to: WPQCGRFIPLGRWHKPWCPYSCP*ETADTC
Trigger: GCAGGTATCTGCAGTCTCTCAGGGACAGCTGTAGGG...GCACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp ACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCTCCCTTCCTGGTCCTaGTCCAGTGGGCCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: THMARAMIRGWFGWFTVALPSWS*SSGPCP
Trigger: GGGGCAAGGCCCACTGGATCAGGACCAGGAAGGGAG...GGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GGTACTGCTGAATGGCAGGCTAAGCTCAGGCTGGAAACCCTGACCTCCTGCCATGTGACAGCAGGAGCCTaGCAGCCTCCCAGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: GTAEWQAKLRLETLTSCHVTAGA*QPPSSH
Trigger: GTGGGAGCTGGGAGGCTGTCAGGCTCCTGCTGTCAC...ATGGCAGGAGGTCAGGGTTTCCAGCCTGAGCTTAGCCTGCCATTCAGCAGTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp TGGAGTAGGCAGGATGGACAGGGCAAGCAGACGCTAGGGGAGGGATGGGAGCAGACCCAGCTCCATGTGTaGGCAACCCTCTTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: WSRQDGQGKQTLGEGWEQTQLHV*ATLLAL
Trigger: CAGAGCCAAGAGGGTTGCTCACACATGGAGCTGGGT...CTGCTCCCATCCCTCCCCTAGCGTCTGCTTGCCCTGTCCATCCTGCCTACTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GAACACTCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCAGAGCCTCCTGTGCTGTaGCCAAGTGGGACAGGGATG +
Preference number: 4 (lower is better)
Translates to: EHSSLASVWQIHPLGAMAEPPVL*PSGTGM
Trigger: CATCCCTGTCCCACTTGGTCACAGCACAGGAGGCTC...TGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGAGTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp CTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGGAGGATGGGCCAATGTaGGGATGGGCCAGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: LASVWQIHPLGAMAQALVEDGPM*GWASPF
Trigger: AAAAGGGCTGGCCCATCCTCACATTGGCCCATCCTC...CACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTGGGTGCAGCGGGCCCTaGTTAGGGGCACTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LVWLVHCGPLNTRPWPQCGCSGP*LGALLC
Trigger: GCAGAGCAGTGCCCCTAAGCAGGGCCCGCTGCACCC...ACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp GATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGAGCGTCATCCAGGGGTaGAGCGGGCCCTGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: DSGLVWLVHCGPLNTRPWSVIQG*SGPCLG
Trigger: CCCTAAGCAGGGCCCGCTGCACCCCTGGATGACGCT...CCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp CCTCGTGGGCTGTCGAGTTCACCTGCACCGCGTCCCGGAGGATCTTCTCCGCCACTGCAGGCTTCCCGATaGCGATATAGACTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: PRGLSSSPAPRPGGSSPPLQASR*RYRLQL
Trigger: CAGCTGAAGTCTATATCGGCATCGGGAAGCCTGCAG...TGGCGGAGAAGATCCTCCGGGACGCGGTGCAGGTGAACTCGACAGCCCACGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS-3UTR GCA 90 bp GAACACTCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCATCTGTGGCCCATGAGTaGAGGAGGCTGCTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: EHSSLASVWQIHPLGAMASVAHE*RRLLGQ
Trigger: CTGCCCAAGCAGCCTCCTGCACTCATGGGCCACAGA...TGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGAGTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GAACACTCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCAGTCTGGTACAGCGCCTaGACCATCTGCCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: EHSSLASVWQIHPLGAMAVWYSA*TICLGG
Trigger: GCCACCAAGGCAGATGGTGCAGGCGCTGTACCAGAC...TGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGAGTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCATCCCACGCTGCGGCCTaGAGAATAACGTGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: GVGLVGSLWPTEHSSLASSHAAA*RITCSP
Trigger: GGGGGAGCACGTTATTCTGCAGGCCGCAGCGTGGGA...TGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCCCTGCTGCTGCTaGTCTGGGGAACCACCAGGC +
Preference number: 4 (lower is better)
Translates to: DSGLVWLVHCGPLNTRPWPPCCC*SGEPPG
Trigger: GCCTGGTGGTTCCCCAGAGCAGCAGCAGCAGGGAGG...CCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGTTCGCCACCCCACCCTaGCCGAAGTTGGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: HGESDDSGLVWLVHCGPLFATPP*PKLAPC
Trigger: GCAGGGAGCCAACTTCGGGCAGGGTGGGGTGGCGAA...CAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp AGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTCAGGCCCAGTGCGGCTaGTACTGCCCGCCTCCCCCG +
Preference number: 4 (lower is better)
Translates to: RETHMARAMIRGWFGWFTQAQCG*YCPPPP
Trigger: CGGGGGAGGCGGGCAGTAGCAGCCGCACTGGGCCTG...AGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp ATGATGACTGTGTGGCCGCCGGGGAGATGCGTGGGGCCATCTGGAGGAGTCTGGGCTCACTGCAAGCTCTaGTTCCCGGGTTCATGCCAT +
Preference number: 4 (lower is better)
Translates to: MMTVWPPGRCVGPSGGVWAHCKL*FPGSCH
Trigger: ATGGCATGAACCCGGGAAGCAGAGCTTGCAGTGAGC...CCAGACTCCTCCAGATGGCCCCACGCATCTCCCCGGCGGCCACACAGTCATCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CCTCTAGGCTTCAGGGCACCTAAGTTCAGAGCTCAGCCCTCCATATTTCCCTGTCAGTCAGCTGGGGCTTaGGGCCTCGGGGACTGGCCC +
Preference number: 4 (lower is better)
Translates to: PLGFRAPKFRAQPSIFPCQSAGA*GLGDWP
Trigger: GGGCCAGTCCCCGAGGCCCCAAGCCCCAGCTGACTG...ACAGGGAAATATGGAGGGCTGAGCTCTGAACTTAGGTGCCCTGAAGCCTAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp AGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTGCACGGCGGGGCTGCTaGCCTCCAGCTCCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SDDSGLVWLVHCGPLNTRARRGC*PPAPRL
Trigger: CAGCCTTGGAGCTGGAGGCCAGCAGCCCCGCCGTGC...ACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CCA 90 bp ACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCATCCCCTTGGGGCGATaGCACAAGCCCTGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: THMARAMIRGWFGWFTVAIPLGR*HKPWCP
Trigger: CGGGCACCAGGGCTTGTGCCATCGCCCCAAGGGGAT...GGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CCA 90 bp GCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCAATCCCCTTGGGGCGATaGCACAAGCCCTGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: AHGESDDSGLVWLVHCGPIPLGR*HKPWCP
Trigger: CGGGCACCAGGGCTTGTGCCATCGCCCCAAGGGGAT...TGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CCA 90 bp CTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGGCAGATTCATCCCCTTaGGGCGATGGCACAAGCCCT +
Preference number: 4 (lower is better)
Translates to: LASVWQIHPLGAMAQALVADSSP*GDGTSP
Trigger: AGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGC...CACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR CCA 90 bp TGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGCTCCCTGGCCTCAGTGTaGCAGATTCATCCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: WPQCGRFIPLGRWHKPWCSLASV*QIHPLG
Trigger: CCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGA...GCACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR CCA 90 bp CTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGTGTGTCCTGGAAAGGTaGGGCCACCCTACAGCTGTC +
Preference number: 4 (lower is better)
Translates to: LASVWQIHPLGAMAQALVCVLER*GHPTAV
Trigger: GACAGCTGTAGGGTGGCCCCACCTTTCCAGGACACA...CACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp TCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCCCATGGATCCCAAATaGGGCTGGGGATGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: SSLASVWQIHPLGAMAQAPMDPK*GWGWEV
Trigger: CACTTCCCATCCCCAGCCCCATTTGGGATCCATGGG...GGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGGTCAGCGGGAGCTGCTaGCTCCAGGCAGACCTGCAG +
Preference number: 4 (lower is better)
Translates to: VGLVGSLWPTEHSSLASVVSGSC*LQADLQ
Trigger: CTGCAGGTCTGCCTGGAGCCAGCAGCTCCCGCTGAC...CACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTGGGTGGTGGGGGCTGTaGGTGGCCCGGATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: ESDDSGLVWLVHCGPLNTGWWGL*VARMVS
Trigger: GCTGACCATCCGGGCCACCCACAGCCCCCACCACCC...AGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGCTCCAATCCCCTGGCTaGCTAAACAGCAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: LASVWQIHPLGAMAQALVLQSPG*LNSSTS
Trigger: GCTGGTGCTGCTGTTTAGCCAGCCAGGGGATTGGAG...CACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GCTCCTAGGAGAGTAGGTGGCCAGGTCCCGATGCAGGCTCCAGCCCAGCAGGCCCTGGAGTTATGGGTTTaGGGGAAGAAGACCACAGAG +
Preference number: 4 (lower is better)
Translates to: APRRVGGQVPMQAPAQQALELWV*GKKTTE
Trigger: CTCTGTGGTCTTCTTCCCCCAAACCCATAACTCCAG...GGCCTGCTGGGCTGGAGCCTGCATCGGGACCTGGCCACCTACTCTCCTAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCGCAGCTGCCCAGCCCTaGGGGTTAGGGCCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: DDSGLVWLVHCGPLNTRPAAAQP*GLGPWG
Trigger: ACCCCAAGGCCCTAACCCCCAGGGCTGGGCAGCTGC...GGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp TCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCGTAATGCTTCTGTGCTaGCAGCAGGAGGGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: SSLASVWQIHPLGAMAQAVMLLC*QQEGKE
Trigger: CTCCTTGCCCTCCTGCTGTCAGCACAGAAGCATTAC...GGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR TCA 90 bp TCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCTGTGGCTCCCGCTCTaGCTGGACCGCTTTAGGTCA +
Preference number: 4 (lower is better)
Translates to: SGLVWLVHCGPLNTRPWPLWLPL*LDRFRS
Trigger: TGACCTAAAGCGGTCCAGTCAGAGCGGGAGCCACAG...AGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp TTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTGCTCTCAGGCCACCCTaGCGGGGTCTCCAGGCATTG +
Preference number: 4 (lower is better)
Translates to: LVWLVHCGPLNTRPWPQCALRPP*RGLQAL
Trigger: CAATGCCTGGAGACCCCGTCAGGGTGGCCTGAGAGC...ACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGGCCCCACTCAGGGCTTaGGTGTCCAGGAGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: DSGLVWLVHCGPLNTRPWAPLRA*VSRRSP
Trigger: AGGACTCCTCCTGGACACTCAAGCCCTGAGTGGGGC...CCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGCCCAGGGCCCGAGGATaGCCCTGTGGGGTCAAGGAG +
Preference number: 4 (lower is better)
Translates to: ETHMARAMIRGWFGWFTVPRARG*PCGVKE
Trigger: CTCCTTGACCCCACAGGGTCATCCTCGGGCCCTGGG...CACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTGGGAAGCGTCAGTGGCCTaGAGACTGTACGTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: GLVGSLWPTEHSSLASVWEASVA*RLYVSP
Trigger: GGGGCTCACGTACAGTCTGCAGGCCACTGACGCTTC...CCACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000555005.5
CDS-3UTR GCA 90 bp GAACACTCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCAACAGGCTGTGGCTTCTaGAGGCTTCCCGATGCCGAT +
Preference number: 4 (lower is better)
Translates to: EHSSLASVWQIHPLGAMATGCGF*RLPDAD
Trigger: ATCGGCATCGGGAAGCCTGCAGAAGCCACAGCCTGT...TGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGAGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR GCA 90 bp GAACACTCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCAATCAGGGCCAGTCGCTaGATGCTCTTCACGTGGGTG +
Preference number: 4 (lower is better)
Translates to: EHSSLASVWQIHPLGAMAIRASR*MLFTWV
Trigger: CACCCACGTGAAGAGCATGCAGCGACTGGCCCTGAT...TGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGAGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR GCA 90 bp GGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACGCTGTCGAGTTCACCTaGACCGCGTCCCGGAGGATC +
Preference number: 4 (lower is better)
Translates to: GESDDSGLVWLVHCGPLNAVEFT*TASRRI
Trigger: GATCCTCCGGGACGCGGTGCAGGTGAACTCGACAGC...GTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp GGTACTGCTGAATGGCAGGCTAAGCTCAGGCTGGAAACCCTGACCTCCTGCCATCTGTTCCTATCTGGCTaGAGCGTGGGCAGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GTAEWQAKLRLETLTSCHLFLSG*SVGRGS
Trigger: GCTGCCCCTGCCCACGCTGCAGCCAGATAGGAACAG...ATGGCAGGAGGTCAGGGTTTCCAGCCTGAGCTTAGCCTGCCATTCAGCAGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCAGTGAGTCGAGATTGTaGCATTGCGCTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SSLASVWQIHPLGAMAQASESRL*HCAPAW
Trigger: CCAGGCTGGAGCGCAATGGCACAATCTCGACTCACT...GGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GAACACTCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACCAGGAGGCGGAGGTTaGAGTGAGTCGAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: EHSSLASVWQIHPLGAMAPGGGG*SESRLC
Trigger: GCACAATCTCGACTCACTGCAACCTCCGCCTCCTGG...TGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGAGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGGGAGCTCTCAGGTGGTaGAAGGCACACGGGGATCCC +
Preference number: 4 (lower is better)
Translates to: HGESDDSGLVWLVHCGPLGALRW*KAHGDP
Trigger: GGGATCCCCGTGTGCCTTGCACCACCTGAGAGCTCC...CAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CAAAACTGCATCCCCAGCATGGCTCTGGTCAAGGTCACTGCCAACCTGCACACCCCCACAGCCACCGCCTaGCCAAAACAGGTCATGCCC +
Preference number: 4 (lower is better)
Translates to: QNCIPSMALVKVTANLHTPTATA*PKQVMP
Trigger: GGGCATGACCTGTTTTGGGCAGGCGGTGGCTGTGGG...GGTGTGCAGGTTGGCAGTGACCTTGACCAGAGCCATGCTGGGGATGCAGTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTGGCTGCTTGGTGATCTGTaGGTGACAGGCTGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: GLVGSLWPTEHSSLASVWLLGDL*VTGCGP
Trigger: GGGCCCACAGCCTGTCACCCACAGATCACCAAGCAG...CCACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000555005.5
CDS-3UTR CCA 90 bp GAACACTCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACTTGGGTACAGGCTGTaGCTTCTGCAGGCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: EHSSLASVWQIHPLGAMALGYRL*LLQASR
Trigger: TCGGGAAGCCTGCAGAAGCCACAGCCTGTACCCAAG...TGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGAGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR CCA 90 bp CATCCAGGGGTGCAGCGGGCCCTGCTTAGGGGCACTGCTCTGCAGAGACGAAGCGACATTGTGGGACATTaGGAAGAGGTTGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: HPGVQRALLRGTALQRRSDIVGH*EEVGSF
Trigger: GAAGCTGCCAACCTCTTCCCAATGTCCCACAATGTC...GCTTCGTCTCTGCAGAGCAGTGCCCCTAAGCAGGGCCCGCTGCACCCCTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS-3UTR CCA 90 bp GGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGCCGTTCCAGACCTCGTaGGCTGTCGAGTTCACCTGC +
Preference number: 4 (lower is better)
Translates to: GLVWLVHCGPLNTRPWPQPFQTS*AVEFTC
Trigger: GCAGGTGAACTCGACAGCCCACGAGGTCTGGAACGG...CTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CCA 90 bp TTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTATCCCCTTGGGGCGATaGCACAAGCCCTGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: LVWLVHCGPLNTRPWPQCIPLGR*HKPWCP
Trigger: CGGGCACCAGGGCTTGTGCCATCGCCCCAAGGGGAT...ACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CCA 90 bp CTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGCTGAACACTCGTCCCTaGCCTCAGTGTGGCAGATTC +
Preference number: 4 (lower is better)
Translates to: LASVWQIHPLGAMAQALVLNTRP*PQCGRF
Trigger: GAATCTGCCACACTGAGGCCAGGGACGAGTGTTCAG...CACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR CCA 90 bp TTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCGATGGCCGGGCATGGTaGCTCACACCAGCACTTTCG +
Preference number: 4 (lower is better)
Translates to: FGVGLVGSLWPTEHSSLADGRAW*LTPALS
Trigger: CGAAAGTGCTGGTGTGAGCCACCATGCCCGGCCATC...GGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp TTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCACTCCTGACCCTCTGTaGCCCATGAGTGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: FGVGLVGSLWPTEHSSLATPDPL*PMSAGG
Trigger: GCCTCCTGCACTCATGGGCCACAGAGGGTCAGGAGT...GGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GCAATGGCCCTGGACTATCCAGGGGGCCCAGAGCAACCAGCAGAGTCCTTAGAGGGTGGAGAGTGGGGGTaGTTCCCTGAGGGAGATGAA +
Preference number: 4 (lower is better)
Translates to: AMALDYPGGPEQPAESLEGGEWG*FPEGDE
Trigger: TTCATCTCCCTCAGGGAACCACCCCCACTCTCCACC...CTCTAAGGACTCTGCTGGTTGCTCTGGGCCCCCTGGATAGTCCAGGGCCATTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGGACTGTGTGGGGCTaGGGCCAAGGTACTGGGGAT +
Preference number: 4 (lower is better)
Translates to: GLVWLVHCGPLNTRPWPQWTVWG*GQGTGD
Trigger: ATCCCCAGTACCTTGGCCCCAGCCCCACACAGTCCA...CTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp TCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCAGACATTGGACTGTGTaGGGCTGGGGCCAAGGTACT +
Preference number: 4 (lower is better)
Translates to: SSLASVWQIHPLGAMAQARHWTV*GWGQGT
Trigger: AGTACCTTGGCCCCAGCCCCACACAGTCCAATGTCT...GGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp TCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTAGCCATGAGAGGGCTTaGGGAAGGAGAGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SGLVWLVHCGPLNTRPWPSHERA*GRRGSQ
Trigger: CTGGCTGCCTCTCCTTCCCCAAGCCCTCTCATGGCT...AGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GCAATGGCCCTGGACTATCCAGGGGGCCCAGAGCAACCAGCAGAGTCCTTAGAGGATAACGGGAGGCCTTaGTTCCCTCCTTTCCCCACC +
Preference number: 4 (lower is better)
Translates to: AMALDYPGGPEQPAESLEDNGRP*FPPFPT
Trigger: GGTGGGGAAAGGAGGGAACCAAGGCCTCCCGTTATC...CTCTAAGGACTCTGCTGGTTGCTCTGGGCCCCCTGGATAGTCCAGGGCCATTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp TCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTATGCGTGGGGCCATCTaGAGGAGTCTGGGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: SGLVWLVHCGPLNTRPWPMRGAI*RSLGCS
Trigger: GGAGCAACCCAGACTCCTCCAGATGGCCCCACGCAT...AGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGAGCGCTGGGAGGGTATaGGGGCATTGGAGGGAGACA +
Preference number: 4 (lower is better)
Translates to: GLVWLVHCGPLNTRPWPQSAGRV*GHWRET
Trigger: TGTCTCCCTCCAATGCCCCCATACCCTCCCAGCGCT...CTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CCAGTGATGAAGCTCCCCAAGCTTCACTTGACTCTGAGGATCTTCTACGCCAGGACCCTCCTCAGGCCTTaGCTGGACCCAGGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: PVMKLPKLHLTLRIFYARTLLRP*LDPGPE
Trigger: CTCGGGCCCTGGGTCCAGCCAAGGCCTGAGGAGGGT...CCTGGCGTAGAAGATCCTCAGAGTCAAGTGAAGCTTGGGGAGCTTCATCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACGGTGGAGGTTCAGGCTaGGCTGGGTGCTCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GESDDSGLVWLVHCGPLNGGGSG*AGCSGS
Trigger: GCTTCCTGAGCACCCAGCCCAGCCTGAACCTCCACC...GTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp TGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGCCCAGGTACCTGTGTCTaGCCAGGGGTCCTTGATACA +
Preference number: 4 (lower is better)
Translates to: WPQCGRFIPLGRWHKPWCPGTCV*PGVLDT
Trigger: TGTATCAAGGACCCCTGGCCAGACACAGGTACCTGG...GCACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp TCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCTGGTCTGGTCCTTGCTaGCAATGTGAGGATGGGCCA +
Preference number: 4 (lower is better)
Translates to: SSLASVWQIHPLGAMAQAWSGPC*QCEDGP
Trigger: TGGCCCATCCTCACATTGCCAGCAAGGACCAGACCA...GGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp TCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCATGGGGGCACCGTCTaGCAAGGTGAGCTTGTCAGG +
Preference number: 4 (lower is better)
Translates to: SGLVWLVHCGPLNTRPWPHGGTV*QGELVR
Trigger: CCTGACAAGCTCACCTTGCCAGACGGTGCCCCCATG...AGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTCATCGTTGGCGATaGGCTTGGCCGACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GLVWLVHCGPLNTRPWPQCHRWR*AWPTAA
Trigger: AGCAGCTGTCGGCCAAGCTCATCGCCAACGATGACA...CTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp TGGAGTAGGCAGGATGGACAGGGCAAGCAGACGCTAGGGGAGGGATGGGAGCAGCACGGGCTCTCCGAGTaGGAGTGTAGGTTTTTGTGT +
Preference number: 4 (lower is better)
Translates to: WSRQDGQGKQTLGEGWEQHGLSE*ECRFLC
Trigger: ACACAAAAACCTACACTCTCACTCGGAGAGCCCGTG...CTGCTCCCATCCCTCCCCTAGCGTCTGCTTGCCCTGTCCATCCTGCCTACTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp TCTTCTCCGCCAGACTGTAGCGGCCTAGCTGGTGAAGGATCAGGGCCAGTCGCTGTAATGCTTCTGTGCTaGCAGCAGGAGGGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: SSPPDCSGLAGEGSGPVAVMLLC*QQEGKE
Trigger: CTCCTTGCCCTCCTGCTGTCAGCACAGAAGCATTAC...AGCGACTGGCCCTGATCCTTCACCAGCTAGGCCGCTACAGTCTGGCGGAGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS-3UTR TCA 90 bp ACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCTGCCTGCTCCACTCTTaGGGCTGCTACCGATGTGGC +
Preference number: 4 (lower is better)
Translates to: THMARAMIRGWFGWFTVACLLHS*GCYRCG
Trigger: GCCACATCGGTAGCAGCCTCAAGAGTGGAGCAGGCA...GGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR TCA 90 bp GGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTCACGTGGGTGGGGCTaGTGGCTAAGGCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: GLVWLVHCGPLNTRPWPQSRGWG*WLRPLH
Trigger: ATGAAGAGGCCTTAGCCATCAGCCCCACCCACGTGA...CTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR TCA 90 bp GGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAACCCAAACCAGTCACTaGTACTGGGGAGCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: GVGLVGSLWPTEHSSLASTQTSH*YWGAGG
Trigger: CCCTCCAGCTCCCCAGTATCAGTGACTGGTTTGGGT...TGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACCATGGTCGCTGTGTaGCAGCAGGAGCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: GESDDSGLVWLVHCGPLNTMVAV*QQEPDS
Trigger: GCTGTCAGGCTCCTGCTGTCACACAGCGACCATGGT...GTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp ACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCTGGCCAGGGGTCCTTaGTACACCGTGGCTGAACAC +
Preference number: 4 (lower is better)
Translates to: THMARAMIRGWFGWFTVALARGP*YTVAEH
Trigger: GTGTTCAGCCACGGTGTATCAAGGACCCCTGGCCAG...GGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp ACTCCCTACACCCCTTCCCTGGCTTCATCTTTCTCCATGCGTCACCCCACCTGCAGGTGGAGGCTGCAGTaGACTGAGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: TPYTPSLASSFSMRHPTCRWRLQ*TEIVPL
Trigger: CAGTGGCACGATCTCAGTTCACTGCAGCCTCCACCT...GCAGGTGGGGTGACGCATGGAGAAAGATGAAGCCAGGGAAGGGGTGTAGGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp CTACACCCCTTCCCTGGCTTCATCTTTCTCCATGCGTCACCCCACCTGCCATACGGCGGGCAGATCACCTaGAGCAGGAGTTCGAGACCA +
Preference number: 4 (lower is better)
Translates to: LHPFPGFIFLHASPHLPYGGQIT*SRSSRP
Trigger: TGGTCTCGAACTCCTGCTTCAGGTGATCTGCCCGCC...GTATGGCAGGTGGGGTGACGCATGGAGAAAGATGAAGCCAGGGAAGGGGTGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GCAGGCAGAGAGTCTGGGCCCGCAATGATGACTGTGTGGCCGCCGGGGAGATGCTACAGACAAGGAAACTaGGATCCAGAGGGAGATGTG +
Preference number: 4 (lower is better)
Translates to: AGRESGPAMMTVWPPGRCYRQGN*DPEGDV
Trigger: CACATCTCCCTCTGGATCTCAGTTTCCTTGTCTGTA...GCATCTCCCCGGCGGCCACACAGTCATCATTGCGGGCCCAGACTCTCTGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp ACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCTTACAAGTCAGCAGTaGCTCGTCCGGGCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: THMARAMIRGWFGWFTVALTSQQ*LVRASA
Trigger: TGCCGAGGCCCGGACGAGGCACTGCTGACTTGTAAG...GGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp CATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGCTTACAAGTCAGCAGTaGCTCGTCCGGGCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: HGESDDSGLVWLVHCGPLLTSQQ*LVRASA
Trigger: TGCCGAGGCCCGGACGAGGCACTGCTGACTTGTAAG...CAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp AGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTAGCGTCATCCAGGGGTaGAGCGGGCCCTGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: SDDSGLVWLVHCGPLNTRSVIQG*SGPCLG
Trigger: CCCTAAGCAGGGCCCGCTGCACCCCTGGATGACGCT...ACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp TCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTATGGAGCCAGATCTGTaGCAGCGTCATCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: SGLVWLVHCGPLNTRPWPMEPDL*QRHPGV
Trigger: CACCCCTGGATGACGCTGGCACAGATCTGGCTCCAT...AGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp GGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAATGGAGCCAGATCTGTaGCAGCGTCATCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: GVGLVGSLWPTEHSSLASMEPDL*QRHPGV
Trigger: CACCCCTGGATGACGCTGGCACAGATCTGGCTCCAT...TGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp TGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGCCTGCAGGCTTCCCGATaGCGATATAGACTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: WPQCGRFIPLGRWHKPWCLQASR*RYRLQL
Trigger: CAGCTGAAGTCTATATCGGCATCGGGAAGCCTGCAG...GCACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR GCA 90 bp CTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGCTGCAGGCTTCCCGATaGCGATATAGACTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LASVWQIHPLGAMAQALVLQASR*RYRLQL
Trigger: CAGCTGAAGTCTATATCGGCATCGGGAAGCCTGCAG...CACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR GCA 90 bp CCTCTAGGCTTCAGGGCACCTAAGTTCAGAGCTCAGCCCTCCATATTTCCCTGTGGGCCAGTCGCTGCATaGTCTTCACGTGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PLGFRAPKFRAQPSIFPCGPVAA*SSRGWG
Trigger: GCCCCACCCACGTGAAGAGCATGCAGCGACTGGCCC...ACAGGGAAATATGGAGGGCTGAGCTCTGAACTTAGGTGCCCTGAAGCCTAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTGCTGTCGAGTTCACCTaGACCGCGTCCCGGAGGATC +
Preference number: 4 (lower is better)
Translates to: LVWLVHCGPLNTRPWPQCAVEFT*TASRRI
Trigger: GATCCTCCGGGACGCGGTGCAGGTGAACTCGACAGC...ACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp CTACACCCCTTCCCTGGCTTCATCTTTCTCCATGCGTCACCCCACCTGCCATACCAGAGCCCAGCCCTGTaGCTCCAATCAGGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: LHPFPGFIFLHASPHLPYQSPAL*LQSGQA
Trigger: AGCTTGCCCTGATTGGAGGCACAGGGCTGGGCTCTG...GTATGGCAGGTGGGGTGACGCATGGAGAAAGATGAAGCCAGGGAAGGGGTGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGAGCGCCTGCACCATCTaGCTTGGTGGCCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: ETHMARAMIRGWFGWFTVSACTI*LGGPAS
Trigger: GGAGGCTGGGCCACCAAGGCAGATGGTGCAGGCGCT...CACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGGGCGTGATCACTCACTaGAGCCTCAACCACCTGGGC +
Preference number: 4 (lower is better)
Translates to: DSGLVWLVHCGPLNTRPWGVITH*SLNHLG
Trigger: GCCCAGGTGGTTGAGGCTGCAGTGAGTGATCACGCC...CCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACCCCCACCACCTTCCTaGCACCTCTCCATAGTCAGC +
Preference number: 4 (lower is better)
Translates to: AHGESDDSGLVWLVHCGPPPPPS*HLSIVS
Trigger: GCTGACTATGGAGAGGTGGCAGGAAGGTGGTGGGGG...TGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCCAAGTGGGACAGGGATaGATGACCCTCCTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: FGVGLVGSLWPTEHSSLAQVGQG*MTLLRP
Trigger: AGGCCTGAGGAGGGTCATGCATCCCTGTCCCACTTG...GGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp AGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTCCTGACCTCCTGCCATaGCCGGGGGAGGAGCCATGC +
Preference number: 4 (lower is better)
Translates to: RETHMARAMIRGWFGWFTPDLLP*PGEEPC
Trigger: GCATGGCTCCTCCCCCGGGCATGGCAGGAGGTCAGG...AGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGCATGGGGTCGCCTGCTaGCTCCCGGTTACCCATACA +
Preference number: 4 (lower is better)
Translates to: VGLVGSLWPTEHSSLASVHGVAC*LPVTHT
Trigger: TGTATGGGTAACCGGGAGGCAGCAGGCGACCCCATG...CACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCAGAGATGAGGTGCCCTaGTCACCCCATCATATCTGG +
Preference number: 4 (lower is better)
Translates to: SSLASVWQIHPLGAMAQARDEVP*SPHHIW
Trigger: CCAGATATGATGGGGTGAGCAGGGCACCTCATCTCT...GGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGCGGCACTTCTCCTTCCTaGTGCCATGTGAAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: WPQCGRFIPLGRWHKPWCGTSPS*CHVKKD
Trigger: GTCCTTCTTCACATGGCAGCAGGAAGGAGAAGTGCC...GCACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CCTATTTCCACATCCTTCTCTCTGAATGCAAGTCACCAAGTCCAGCCCACACTCGGGATCCGCTCCCACTaGCACTCGGAGCGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: PISTSFSLNASHQVQPTLGIRSH*HSERQR
Trigger: GCGCTGCCGCTCCGAGTGCCAGTGGGAGCGGATCCC...GAGTGTGGGCTGGACTTGGTGACTTGCATTCAGAGAGAAGGATGTGGAAATAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp TCTTCTCCGCCAGACTGTAGCGGCCTAGCTGGTGAAGGATCAGGGCCAGTCGCTATACCCCAGAGCCTCTaGGATCTGTCTGGAGATGGC +
Preference number: 4 (lower is better)
Translates to: SSPPDCSGLAGEGSGPVAIPQSL*DLSGDG
Trigger: GCCATCTCCAGACAGATCCCAGAGGCTCTGGGGTAT...AGCGACTGGCCCTGATCCTTCACCAGCTAGGCCGCTACAGTCTGGCGGAGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS-3UTR CCA 90 bp ACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCGCTACCGATGTGGCATaGACGGAGCCTGTCTCGGGA +
Preference number: 4 (lower is better)
Translates to: THMARAMIRGWFGWFTVAATDVA*TEPVSG
Trigger: TCCCGAGACAGGCTCCGTCCATGCCACATCGGTAGC...GGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000555894.5
CDS-3UTR CCA 90 bp GGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACGCTACCGATGTGGCATaGACGGAGCCTGTCTCGGGA +
Preference number: 4 (lower is better)
Translates to: GESDDSGLVWLVHCGPLNATDVA*TEPVSG
Trigger: TCCCGAGACAGGCTCCGTCCATGCCACATCGGTAGC...GTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000555894.5
CDS-3UTR CCA 90 bp GGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTGGAGGCTGCTACCGATGTaGCATGGACGGAGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: GLVGSLWPTEHSSLASVWRLLPM*HGRSLS
Trigger: AGACAGGCTCCGTCCATGCCACATCGGTAGCAGCCT...CCACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000555894.5
CDS-3UTR CCA 90 bp GCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACCGTTCCAGACCTCGTaGGCTGTCGAGTTCACCTGC +
Preference number: 4 (lower is better)
Translates to: AHGESDDSGLVWLVHCGPPFQTS*AVEFTC
Trigger: GCAGGTGAACTCGACAGCCCACGAGGTCTGGAACGG...TGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CCA 90 bp TCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTTCCCTGGCCTCAGTGTaGCAGATTCATCCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SGLVWLVHCGPLNTRPWPSLASV*QIHPLG
Trigger: CCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGA...AGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CCA 90 bp GGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTGGTCCCTGGCCTCAGTGTaGCAGATTCATCCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: GLVGSLWPTEHSSLASVWSLASV*QIHPLG
Trigger: CCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGA...CCACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CCA 90 bp TGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGCGATTCGGGGTTGGTTTaGTTGGTTCACTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: WPQCGRFIPLGRWHKPWCDSGLV*LVHCGP
Trigger: TGGGCCACAGTGAACCAACCAAACCAACCCCGAATC...GCACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR CCA 90 bp GGTACTGCTGAATGGCAGGCTAAGCTCAGGCTGGAAACCCTGACCTCCTGCCATCATGTGGGTGGAGAGTaGGGGTGGTTCCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: GTAEWQAKLRLETLTSCHHVGGE*GWFPEG
Trigger: TCCCTCAGGGAACCACCCCCACTCTCCACCCACATG...ATGGCAGGAGGTCAGGGTTTCCAGCCTGAGCTTAGCCTGCCATTCAGCAGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGGGACTGTGCAGACATTaGACTGTGTGGGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: HGESDDSGLVWLVHCGPLGLCRH*TVWGWG
Trigger: GCCCCAGCCCCACACAGTCCAATGTCTGCACAGTCC...CAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGAAAGGTGACGTGAGGTaGCCACGAGCCAAGGCCGCA +
Preference number: 4 (lower is better)
Translates to: VGLVGSLWPTEHSSLASVKGDVR*PRAKAA
Trigger: TGCGGCCTTGGCTCGTGGCCACCTCACGTCACCTTT...CACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp AGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTCAGGGCTCCCTGGCTTaGGGGTACCCAGGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: RETHMARAMIRGWFGWFTQGSLA*GYPGLC
Trigger: GCAGAGGCCTGGGTACCCCCAAGCCAGGGAGCCCTG...AGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCAGTCCTGAGATCCTCTTaGCTGAGTGGGGCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: AHGESDDSGLVWLVHCGPVLRSS*LSGAAP
Trigger: AGGAGCCGCCCCACTCAGCCAAGAGGATCTCAGGAC...TGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGAGACAGACGAGCCCATaGATCCCAAATGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GLVWLVHCGPLNTRPWPQRQTSP*IPNGAG
Trigger: CCCAGCCCCATTTGGGATCCATGGGCTCGTCTGTCT...CTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp TCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTAGGGTATGGGGGCATTaGAGGGAGACAGTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: SGLVWLVHCGPLNTRPWPRVWGH*RETVAR
Trigger: TCTGGCCACTGTCTCCCTCCAATGCCCCCATACCCT...AGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GGTACTGCTGAATGGCAGGCTAAGCTCAGGCTGGAAACCCTGACCTCCTGCCATACGCTAGGGGAGGGATaGGAGCAGCCACCTGGTACA +
Preference number: 4 (lower is better)
Translates to: GTAEWQAKLRLETLTSCHTLGEG*EQPPGT
Trigger: TGTACCAGGTGGCTGCTCCCATCCCTCCCCTAGCGT...ATGGCAGGAGGTCAGGGTTTCCAGCCTGAGCTTAGCCTGCCATTCAGCAGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CCTCTAGGCTTCAGGGCACCTAAGTTCAGAGCTCAGCCCTCCATATTTCCCTGTCACAACCCGAGCCCTTaGGCCACAGGCACCGCCTCA +
Preference number: 4 (lower is better)
Translates to: PLGFRAPKFRAQPSIFPCHNPSP*ATGTAS
Trigger: TGAGGCGGTGCCTGTGGCCCAAGGGCTCGGGTTGTG...ACAGGGAAATATGGAGGGCTGAGCTCTGAACTTAGGTGCCCTGAAGCCTAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGAAGCCTCCATGGGCTTaGGGAGGTCATTTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: LASVWQIHPLGAMAQALVKPPWA*GGHFPG
Trigger: ACCAGGAAAATGACCTCCCCAAGCCCATGGAGGCTT...CACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGGCCTCACTGCCACCTaGGTGGGTGGAGGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: ETHMARAMIRGWFGWFTVGLTAT*VGGGSG
Trigger: GCCTGAACCTCCACCCACCCAGGTGGCAGTGAGGCC...CACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp TGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGCGTCCTTGATACACCGTaGCTGAACACAGGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: WPQCGRFIPLGRWHKPWCVLDTP*LNTGRK
Trigger: CTTCCTGCCTGTGTTCAGCCACGGTGTATCAAGGAC...GCACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTGGAGCTCTCAGGTaGTGCAAGGCACACGGGGAT +
Preference number: 4 (lower is better)
Translates to: DSGLVWLVHCGPLNTRPWPGALR*CKAHGD
Trigger: ATCCCCGTGTGCCTTGCACCACCTGAGAGCTCCAGG...CCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGGGCCTTGGGGTTTCTaGCTAGAAACAGGGCTCACC +
Preference number: 4 (lower is better)
Translates to: GVGLVGSLWPTEHSSLASGPWGF*LETGLT
Trigger: GGTGAGCCCTGTTTCTAGCCAGAAACCCCAAGGCCC...TGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp ACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCGGATCAGGGCCTGCATaGAGCCAGATCTGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: THMARAMIRGWFGWFTVAGSGPA*SQICAS
Trigger: GCTGGCACAGATCTGGCTCCATGCAGGCCCTGATCC...GGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555894.5
CDS-3UTR TCA 90 bp CATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGCCTGCAGACTGTACGTaGGCCCCAGAGCTAAGTAGC +
Preference number: 4 (lower is better)
Translates to: HGESDDSGLVWLVHCGPLPADCT*APELSS
Trigger: GCTACTTAGCTCTGGGGCTCACGTACAGTCTGCAGG...CAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000555005.5
CDS-3UTR TCA 90 bp GAACACTCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCAACATGGCGAGAGCGATaGTTCGGGGTTGGTTTGGTT +
Preference number: 4 (lower is better)
Translates to: EHSSLASVWQIHPLGAMATWRER*FGVGLV
Trigger: AACCAAACCAACCCCGAATCATCGCTCTCGCCATGT...TGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGAGTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR TCA 90 bp CAAAACTGCATCCCCAGCATGGCTCTGGTCAAGGTCACTGCCAACCTGCACACCTCTAGTGTCAAGGGCTaGCATGTCCAGAGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: QNCIPSMALVKVTANLHTSSVKG*HVQSGP
Trigger: GGGCCCACTCTGGACATGTCAGCCCTTGACACTAGA...GGTGTGCAGGTTGGCAGTGACCTTGACCAGAGCCATGCTGGGGATGCAGTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp CAACCAGCGTGGCTTCGGCCAGTTAACAGACCACTTCTTGGAGTCATGAGGATTCGCGCCCTGCAGGGCTaGTACGCACAGGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: QPAWLRPVNRPLLGVMRIRALQG*YAQESL
Trigger: CAGAGACTCCTGTGCGTATCAGCCCTGCAGGGCGCG...AATCCTCATGACTCCAAGAAGTGGTCTGTTAACTGGCCGAAGCCACGCTGGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp CTACACCCCTTCCCTGGCTTCATCTTTCTCCATGCGTCACCCCACCTGCCATACGCTGTTCCTGCTTCCTaGGATGTCCTCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LHPFPGFIFLHASPHLPYAVPAS*DVLLPG
Trigger: ACCTGGGAGGAGGACATCTCAGGAAGCAGGAACAGC...GTATGGCAGGTGGGGTGACGCATGGAGAAAGATGAAGCCAGGGAAGGGGTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp AGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGGGGTCTCCAGGCATTaGGAGAGCCCACCCACCTCC +
Preference number: 4 (lower is better)
Translates to: RETHMARAMIRGWFGWFTGVSRH*ESPPTS
Trigger: GGAGGTGGGTGGGCTCTCTCAATGCCTGGAGACCCC...AGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCTGGGTTGCTCCATGTaGTCACAGACACGCCCACCT +
Preference number: 4 (lower is better)
Translates to: DSGLVWLVHCGPLNTRPWLGCSM*SQTRPP
Trigger: AGGTGGGCGTGTCTGTGATCACATGGAGCAACCCAG...CCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp CCAGGGTGGGCACCTTCTTGTCACTCAATGTCACTGTCTTACAGAGGTGTCCCCGGCACACACCACCTCTaGCAGCTGCCTGCAGACTCA +
Preference number: 4 (lower is better)
Translates to: PGWAPSCHSMSLSYRGVPGTHHL*QLPADS
Trigger: TGAGTCTGCAGGCAGCTGTCAGAGGTGGTGTGTGCC...GGGGACACCTCTGTAAGACAGTGACATTGAGTGACAAGAAGGTGCCCACCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp CACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACGGCAGGAGAATCACTTaGACCCGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: HMARAMIRGWFGWFTVAHGRRIT*TREVEV
Trigger: AACCTCCACCTCCCGGGTTCAAGTGATTCTCCTGCC...GTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTTGTTCCTTCAGGTACTaGTCCAGCTTCGACTCCCCG +
Preference number: 4 (lower is better)
Translates to: SGLVWLVHCGPLNTRPWPCSFRY*SSFDSP
Trigger: CGGGGAGTCGAAGCTGGAGCAGTACCTGAAGGAACA...AGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CCAGTGATGAAGCTCCCCAAGCTTCACTTGACTCTGAGGATCTTCTACGCCAGGAGGGCGGCGGTCAGATaGTTGCGGACCTCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: PVMKLPKLHLTLRIFYARRAAVR*LRTSVS
Trigger: GCTGACTGAGGTCCGCAAGCATCTGACCGCCGCCCT...CCTGGCGTAGAAGATCCTCAGAGTCAAGTGAAGCTTGGGGAGCTTCATCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp ATGATGACTGTGTGGCCGCCGGGGAGATGCGTGGGGCCATCTGGAGGAGTCTGGGAGTGCGATGTCCCCTaGTTTCTCATAACAGGTGAT +
Preference number: 4 (lower is better)
Translates to: MMTVWPPGRCVGPSGGVWECDVP*FLITGD
Trigger: ATCACCTGTTATGAGAAAGCAGGGGACATCGCACTC...CCAGACTCCTCCAGATGGCCCCACGCATCTCCCCGGCGGCCACACAGTCATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGTTGGAGATACAGGAGTaGGATGTCCCCTGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LASVWQIHPLGAMAQALVLEIQE*DVPCFL
Trigger: GAGAAAGCAGGGGACATCGCACTCCTGTATCTCCAA...CACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCTCTGTAGGACCTCCTaGATCCCTCGCAAAGAAGCG +
Preference number: 4 (lower is better)
Translates to: SGLVWLVHCGPLNTRPWPLCRTS*IPRKEA
Trigger: CGCTTCTTTGCGAGGGATGCAGGAGGTCCTACAGAG...AGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000555005.5
CDS-3UTR GCA 90 bp GGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTGGTTAGGGGCACTGCTCTaGAGAGACGAAGCCACTTCC +
Preference number: 4 (lower is better)
Translates to: GLVGSLWPTEHSSLASVWLGALL*RDEATS
Trigger: GGAAGTGGCTTCGTCTCTGCAGAGCAGTGCCCCTAA...CCACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp AGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTAGCGTCATCCAGGGGTaGAGCGGGCCCTGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: RNAHGESDDSGLVWLVHCSVIQG*SGPCLG
Trigger: CCCTAAGCAGGGCCCGCTGCACCCCTGGATGACGCT...ACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp GGTACTGCTGAATGGCAGGCTAAGCTCAGGCTGGAAACCCTGACCTCCTGCCATATCAGGGCCAGTCGCTaGATGCTCTTCACGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GTAEWQAKLRLETLTSCHIRASR*MLFTWV
Trigger: CACCCACGTGAAGAGCATGCAGCGACTGGCCCTGAT...ATGGCAGGAGGTCAGGGTTTCCAGCCTGAGCTTAGCCTGCCATTCAGCAGTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CCAGTGATGAAGCTCCCCAAGCTTCACTTGACTCTGAGGATCTTCTACGCCAGGGCTGTCGAGTTCACCTaGACCGCGTCCCGGAGGATC +
Preference number: 4 (lower is better)
Translates to: PVMKLPKLHLTLRIFYARAVEFT*TASRRI
Trigger: GATCCTCCGGGACGCGGTGCAGGTGAACTCGACAGC...CCTGGCGTAGAAGATCCTCAGAGTCAAGTGAAGCTTGGGGAGCTTCATCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTCTGAGGCGGGAGGGCTaGTTGAGTCCAGGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: LVWLVHCGPLNTRPWPQCLRREG*LSPGVQ
Trigger: CTGAACTCCTGGACTCAAGCAGCCCTCCCGCCTCAG...ACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGCCTGTCCCTGAGAGACTaGAGATACCTGCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: WPQCGRFIPLGRWHKPWCLSLRD*RYLLSF
Trigger: GAAACTGAGCAGGTATCTGCAGTCTCTCAGGGACAG...GCACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GGTACTGCTGAATGGCAGGCTAAGCTCAGGCTGGAAACCCTGACCTCCTGCCATCAAAGCCACAAGTGCTaGCTGGCAGGGTCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: GTAEWQAKLRLETLTSCHQSHKC*LAGSVL
Trigger: CAGCACTGACCCTGCCAGGCAGCACTTGTGGCTTTG...ATGGCAGGAGGTCAGGGTTTCCAGCCTGAGCTTAGCCTGCCATTCAGCAGTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCACTCAAAGCCACAAGTaGTGCCTGGCAGGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: FGVGLVGSLWPTEHSSLATQSHK*CLAGSV
Trigger: CACTGACCCTGCCAGGCAGCACTTGTGGCTTTGAGT...GGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTCTAAACAGCAGCCCTaGCACTCCCTACACCCCTTC +
Preference number: 4 (lower is better)
Translates to: GLVWLVHCGPLNTRPWPQSKQQP*HSLHPF
Trigger: GAAGGGGTGTAGGGAGTGGCAGGGCTGCTGTTTAGA...CTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TCACCAGGAAACCCTATTGTCCTCAGGGGGTCAAGGGCCAAACAGCAGAAGATGAGGTCACTGCCAACCTaGACACCACCAGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: SPGNPIVLRGSRAKQQKMRSLPT*TPPGPR
Trigger: CCGTGGGCCTGGTGGTGTGCAGGTTGGCAGTGACCT...CATCTTCTGCTGTTTGGCCCTTGACCCCCTGAGGACAATAGGGTTTCCTGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTCTGGTCAAGGTCACTaGCAACCTGCACACCACCAG +
Preference number: 4 (lower is better)
Translates to: GLVWLVHCGPLNTRPWPQSGQGH*QPAHHQ
Trigger: CTGGTGGTGTGCAGGTTGGCAGTGACCTTGACCAGA...CTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGATGGTCAGCGGGAGCTaGTGGCTCCAGGCAGACCTG +
Preference number: 4 (lower is better)
Translates to: ETHMARAMIRGWFGWFTVMVSGS*WLQADL
Trigger: CAGGTCTGCCTGGAGCCAGCAGCTCCCGCTGACCAT...CACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TCACCAGGAAACCCTATTGTCCTCAGGGGGTCAAGGGCCAAACAGCAGAAGATGACCCCCAAGTCTCCTTaGCCCAGGCGCAATCACGGG +
Preference number: 4 (lower is better)
Translates to: SPGNPIVLRGSRAKQQKMTPKSP*PRRNHG
Trigger: CCCGTGATTGCGCCTGGGGCAAGGAGACTTGGGGGT...CATCTTCTGCTGTTTGGCCCTTGACCCCCTGAGGACAATAGGGTTTCCTGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CCTCGTGGGCTGTCGAGTTCACCTGCACCGCGTCCCGGAGGATCTTCTCCGCCACTCAGGTCATTCAAATaGACTGGATCCCCATATCCA +
Preference number: 4 (lower is better)
Translates to: PRGLSSSPAPRPGGSSPPLRSFK*TGSPYP
Trigger: TGGATATGGGGATCCAGTGCATTTGAATGACCTGAG...TGGCGGAGAAGATCCTCCGGGACGCGGTGCAGGTGAACTCGACAGCCCACGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS-3UTR CCA 90 bp CCAGTGATGAAGCTCCCCAAGCTTCACTTGACTCTGAGGATCTTCTACGCCAGGCGGGACAGCTGTCAGTaGCAGATCGTCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: PVMKLPKLHLTLRIFYARRDSCQ*QIVQAH
Trigger: GTGGGCCTGGACGATCTGCCACTGACAGCTGTCCCG...CCTGGCGTAGAAGATCCTCAGAGTCAAGTGAAGCTTGGGGAGCTTCATCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGAGGCTGCTACCGATGTaGCATGGACGGAGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: VGLVGSLWPTEHSSLASVRLLPM*HGRSLS
Trigger: AGACAGGCTCCGTCCATGCCACATCGGTAGCAGCCT...CACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000555894.5
CDS-3UTR CCA 90 bp ACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCTTGGGTACAGGCTGTaGCTTCTGCAGGCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: THMARAMIRGWFGWFTVALGYRL*LLQASR
Trigger: TCGGGAAGCCTGCAGAAGCCACAGCCTGTACCCAAG...GGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR CCA 90 bp GCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCAGCAGATTCATCCCCTTaGGGCGATGGCACAAGCCCT +
Preference number: 4 (lower is better)
Translates to: AHGESDDSGLVWLVHCGPADSSP*GDGTSP
Trigger: AGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGC...TGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CCA 90 bp GGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTGGCTGAACACTCGTCCCTaGCCTCAGTGTGGCAGATTC +
Preference number: 4 (lower is better)
Translates to: GLVGSLWPTEHSSLASVWLNTRP*PQCGRF
Trigger: GAATCTGCCACACTGAGGCCAGGGACGAGTGTTCAG...CCACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CCA 90 bp CTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGGTGGGATTCGGACTTTaGCTCAAACACCTCTACACC +
Preference number: 4 (lower is better)
Translates to: LASVWQIHPLGAMAQALVVGFGL*LKHLYT
Trigger: GGTGTAGAGGTGTTTGAGCCAAAGTCCGAATCCCAC...CACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp AGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTCTGGTCCTGATCCAGTaGGCCTTGCCCCACGCTCCC +
Preference number: 4 (lower is better)
Translates to: RETHMARAMIRGWFGWFTLVLIQ*ALPHAP
Trigger: GGGAGCGTGGGGCAAGGCCCACTGGATCAGGACCAG...AGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp AGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCACCATCTGCCTTGGTaGCCCAGCCTCCTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: SDDSGLVWLVHCGPLNTRHHLPW*PSLLPS
Trigger: GGAAGGGAGGAGGCTGGGCCACCAAGGCAGATGGTG...ACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GCAATGGCCCTGGACTATCCAGGGGGCCCAGAGCAACCAGCAGAGTCCTTAGAGAGGGGTGCTTCTCATTaGCCAAGCATGGGTCACATG +
Preference number: 4 (lower is better)
Translates to: AMALDYPGGPEQPAESLERGASH*PSMGHM
Trigger: CATGTGACCCATGCTTGGCCAATGAGAAGCACCCCT...CTCTAAGGACTCTGCTGGTTGCTCTGGGCCCCCTGGATAGTCCAGGGCCATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCCTCACCCTCATCCCTaGCGTCTCCCCTCCCTCACA +
Preference number: 4 (lower is better)
Translates to: ESDDSGLVWLVHCGPLNTPHPHP*RLPSLT
Trigger: TGTGAGGGAGGGGAGACGCCAGGGATGAGGGTGAGG...AGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CCAGGGTGGGCACCTTCTTGTCACTCAATGTCACTGTCTTACAGAGGTGTCCCCACTCTCGCCTCATCTTaGGCTCTCGCCTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PGWAPSCHSMSLSYRGVPTLASS*ALAWAP
Trigger: AGGAGCCCAGGCGAGAGCCCAAGATGAGGCGAGAGT...GGGGACACCTCTGTAAGACAGTGACATTGAGTGACAAGAAGGTGCCCACCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CCTCTAGGCTTCAGGGCACCTAAGTTCAGAGCTCAGCCCTCCATATTTCCCTGTTCACCCATTCCAGCCTaGAGCCGGCTGTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PLGFRAPKFRAQPSIFPCSPIPA*SRLCCR
Trigger: CCTGCAGCACAGCCGGCTCCAGGCTGGAATGGGTGA...ACAGGGAAATATGGAGGGCTGAGCTCTGAACTTAGGTGCCCTGAAGCCTAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTGGGCAGGAATGAGAAGGTaGCGATATGGAGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: GLVGSLWPTEHSSLASVWAGMRR*RYGERG
Trigger: CCCCCTCTCTCCATATCGCCACCTTCTCATTCCTGC...CCACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACAAAGACAAGAGTGGTaGCGGTCACAGAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: AHGESDDSGLVWLVHCGPQRQEW*RSQRPP
Trigger: TGGGGGCCTCTGTGACCGCCACCACTCTTGTCTTTG...TGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACCCGAGGATGACCCTGTaGGGTCAAGGAGGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: HMARAMIRGWFGWFTVAHPRMTL*GQGGKD
Trigger: GTCTTTGCCTCCTTGACCCCACAGGGTCATCCTCGG...GTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACGAGCCTGGAGGAAGCTaGAGTCTGGGTTTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: HMARAMIRGWFGWFTVAHEPGGS*SLGFSG
Trigger: GCCACTGAAACCCAGACTCCAGCTTCCTCCAGGCTC...GTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CCTCTAGGCTTCAGGGCACCTAAGTTCAGAGCTCAGCCCTCCATATTTCCCTGTAACAGGTCATGCCCCTaGAGTGGCCTCGCACCGTCC +
Preference number: 4 (lower is better)
Translates to: PLGFRAPKFRAQPSIFPCNRSCP*SGLAPS
Trigger: GGACGGTGCGAGGCCACTCCAGGGGCATGACCTGTT...ACAGGGAAATATGGAGGGCTGAGCTCTGAACTTAGGTGCCCTGAAGCCTAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CAA 72 bp CCCATGAGTGCAGGAGGCTGCTTGGGCAGGACTGAATaGCATGCTCCAATTCCAAAGCCCCATCGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: PMSAGGCLGRTE*HAPIPKPHRGR
Trigger: TCTCCCCCGATGGGGCTTTGGAATTGGAGCATGCAATTCAGTCCTGCCCAAGCAGCCTCCTGCACTCATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp ACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCAGGCTGTGGGCCCTCTaGAATGCAAGAAGCGCCTTT +
Preference number: 4 (lower is better)
Translates to: THMARAMIRGWFGWFTVARLWAL*NARSAF
Trigger: AAAGGCGCTTCTTGCATTTCAGAGGGCCCACAGCCT...GGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000555005.5
CDS-3UTR TCA 90 bp GGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTGGTCAGGGCCATGTCGATaGTGTTCAGAGCGTCATGGT +
Preference number: 4 (lower is better)
Translates to: GLVGSLWPTEHSSLASVWSGPCR*CSERHG
Trigger: ACCATGACGCTCTGAACATCATCGACATGGCCCTGA...CCACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR TCA 90 bp GAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTTTCACTGTGGCCCACTaGACACTCGTCCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: ESDDSGLVWLVHCGPLNTFTVAH*TLVPGL
Trigger: GAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAA...AGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR TCA 90 bp AGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTTTCACTGTGGCCCACTaGACACTCGTCCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SDDSGLVWLVHCGPLNTRFTVAH*TLVPGL
Trigger: GAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAA...ACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR TCA 90 bp GGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGACATGGCGAGAGCGATaGTTCGGGGTTGGTTTGGTT +
Preference number: 4 (lower is better)
Translates to: GLVWLVHCGPLNTRPWPQTWRER*FGVGLV
Trigger: AACCAAACCAACCCCGAATCATCGCTCTCGCCATGT...CTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR TCA 90 bp GGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGAGGTCGTGCCCAGTTTaGATGCAGTCCTCTAGGCTT +
Preference number: 4 (lower is better)
Translates to: GLVWLVHCGPLNTRPWPQRSCPV*MQSSRL
Trigger: AAGCCTAGAGGACTGCATTCAAACTGGGCACGACCT...CTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp CATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGCCATGTGTCCATCCTTaGGCCATGTGGGTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: HGESDDSGLVWLVHCGPLPCVHP*AMWVES
Trigger: ACTCTCCACCCACATGGCTCAAGGATGGACACATGG...CAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTGAAGGAAAGGTGACGTaGGGTGGCCACGAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: ESDDSGLVWLVHCGPLNTEGKVT*GGHEPR
Trigger: CCTTGGCTCGTGGCCACCTCACGTCACCTTTCCTTC...AGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp CTACACCCCTTCCCTGGCTTCATCTTTCTCCATGCGTCACCCCACCTGCCATACCACTCCAACCTGGCTTaGCCCCACCTTAGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: LHPFPGFIFLHASPHLPYHSNLA*PHLSQL
Trigger: AAGCTGACTAAGGTGGGGTCAAGCCAGGTTGGAGTG...GTATGGCAGGTGGGGTGACGCATGGAGAAAGATGAAGCCAGGGAAGGGGTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp AAAAACAAGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGCCTGTGTGGTGGTCCTaGGGGGCGGTAGCCCTCGTG +
Preference number: 4 (lower is better)
Translates to: KNKRNAHGESDDSGLVWLPVWWS*GAVALV
Trigger: CACGAGGGCTACCGCCCCTCAGGACCACCACACAGG...CAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCTTGTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp ACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCGGGGACCAGATCACTTaGGACCAGGAGTTGGAGATC +
Preference number: 4 (lower is better)
Translates to: THMARAMIRGWFGWFTVAGDQIT*DQELEI
Trigger: GATCTCCAACTCCTGGTCTCAAGTGATCTGGTCCCC...GGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAAGCCAAGCACACCCCTaGGAAACTGGAAAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: GVGLVGSLWPTEHSSLASSQAHP*ETGKGK
Trigger: TTTGCCCTTTCCAGTTTCTCAGGGGTGTGCTTGGCT...TGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp CTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGTCCGATAGCGGGATCTaGCTGCATTTTGCATTCATG +
Preference number: 4 (lower is better)
Translates to: LASVWQIHPLGAMAQALVSDSGI*LHFAFM
Trigger: CATGAATGCAAAATGCAGTCAGATCCCGCTATCGGA...CACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCCTGTTTCCGACGGTGTaGCCCGAGTGCGCTTCGTTA +
Preference number: 4 (lower is better)
Translates to: DDSGLVWLVHCGPLNTRPLFPTV*PECASL
Trigger: TAACGAAGCGCACTCGGGTCACACCGTCGGAAACAG...GGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTGGTTCACACTCTGCAGGTaGCCACGCAAAGTGGTAGAG +
Preference number: 4 (lower is better)
Translates to: GLVGSLWPTEHSSLASVWFTLCR*PRKVVE
Trigger: CTCTACCACTTTGCGTGGTCACCTGCAGAGTGTGAA...CCACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CCTATTTCCACATCCTTCTCTCTGAATGCAAGTCACCAAGTCCAGCCCACACTCCTCCAGCCGCGAGCCTaGCTTCTTGGTCGCCATCGC +
Preference number: 4 (lower is better)
Translates to: PISTSFSLNASHQVQPTLLQPRA*LLGRHR
Trigger: GCGATGGCGACCAAGAAGGCAGGCTCGCGGCTGGAG...GAGTGTGGGCTGGACTTGGTGACTTGCATTCAGAGAGAAGGATGTGGAAATAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCAGCTTGGCCGACAGCTaGTTGACGAGCTCAGGGATC +
Preference number: 4 (lower is better)
Translates to: DDSGLVWLVHCGPLNTRPSLADS*LTSSGI
Trigger: GATCCCTGAGCTCGTCAAGCAGCTGTCGGCCAAGCT...GGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp ACTCCCTACACCCCTTCCCTGGCTTCATCTTTCTCCATGCGTCACCCCACCTGCCCGCAACAAGATCTCTaGCAGCTGCCTGGCTATTGT +
Preference number: 4 (lower is better)
Translates to: TPYTPSLASSFSMRHPTCPQQDL*QLPGYC
Trigger: ACAATAGCCAGGCAGCTGGCAGAGATCTTGTTGCGG...GCAGGTGGGGTGACGCATGGAGAAAGATGAAGCCAGGGAAGGGGTGTAGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGTGTGTTCAGGTATCCTaGTCAGCACAGCGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: HGESDDSGLVWLVHCGPLCVQVS*SAQRPG
Trigger: ACCGGGACGCTGTGCTGAGCAGGATACCTGAACACA...CAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000555005.5
CDS-3UTR GCA 90 bp GGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTGGACCACAGATGCACTCTaGAGACTGATGAGGCGGTCA +
Preference number: 4 (lower is better)
Translates to: GLVGSLWPTEHSSLASVWTTDAL*RLMRRS
Trigger: TGACCGCCTCATCAGTCTGCAGAGTGCATCTGTGGT...CCACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000555005.5
CDS-3UTR GCA 90 bp CTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGCCTCGGCAGAGTGACTaGAACTTCACTTTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: LASVWQIHPLGAMAQALVPRQSD*NFTLEN
Trigger: GTTTTCCAAAGTGAAGTTGCAGTCACTCTGCCGAGG...CACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR GCA 90 bp ATTTCCATATCTGCAGCATGTGCTTACAAGTCAGCAGTGCCTCGTCCGGGCCTCCTTACAAGTCAGCAGTaGCTCGTCCGGGCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: ISISAACAYKSAVPRPGLLTSQQ*LVRASA
Trigger: TGCCGAGGCCCGGACGAGGCACTGCTGACTTGTAAG...GAGGCCCGGACGAGGCACTGCTGACTTGTAAGCACATGCTGCAGATATGGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555239.5
CDS-3UTR GCA 90 bp GGTACTGCTGAATGGCAGGCTAAGCTCAGGCTGGAAACCCTGACCTCCTGCCATACTTCCGACAGTGCCTaGTCCACTCTTGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GTAEWQAKLRLETLTSCHTSDSA*STLEAA
Trigger: AGCAGCCTCAAGAGTGGAGCAGGCACTGTCGGAAGT...ATGGCAGGAGGTCAGGGTTTCCAGCCTGAGCTTAGCCTGCCATTCAGCAGTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCAACTTCCGACAGTGCCTaGTCCACTCTTGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: AHGESDDSGLVWLVHCGPTSDSA*STLEAA
Trigger: AGCAGCCTCAAGAGTGGAGCAGGCACTGTCGGAAGT...TGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp CACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACACTTCCGACAGTGCCTaGTCCACTCTTGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: HMARAMIRGWFGWFTVAHTSDSA*STLEAA
Trigger: AGCAGCCTCAAGAGTGGAGCAGGCACTGTCGGAAGT...GTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp GATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGTTAGGGGCACTGCTCTaGAGAGACGAAGCCACTTCC +
Preference number: 4 (lower is better)
Translates to: DSGLVWLVHCGPLNTRPWLGALL*RDEATS
Trigger: GGAAGTGGCTTCGTCTCTGCAGAGCAGTGCCCCTAA...CCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp AAACCAAAACCAGGGCTGTTGCTGCAAAAAGGAGGCCTGGGTGCTGAGGACGCAATGGAGCCAGATCTGTaGCAGCGTCATCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: KPKPGLLLQKGGLGAEDAMEPDL*QRHPGV
Trigger: CACCCCTGGATGACGCTGGCACAGATCTGGCTCCAT...TGCGTCCTCAGCACCCAGGCCTCCTTTTTGCAGCAACAGCCCTGGTTTTGGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CATGTAGAGGACATTGTGGGACATTGGGAAGAGGTTGGCAGCTTCTTGGGTACAGGGCCAGTCGCTGCATaGTCTTCACGTGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: HVEDIVGHWEEVGSFLGTGPVAA*SSRGWG
Trigger: GCCCCACCCACGTGAAGAGCATGCAGCGACTGGCCC...TGTACCCAAGAAGCTGCCAACCTCTTCCCAATGTCCCACAATGTCCTCTACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS-3UTR GCA 90 bp TTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCACCACACTGAGTACCTaGCCCAGGTCCTACATTGCA +
Preference number: 4 (lower is better)
Translates to: FGVGLVGSLWPTEHSSLATTLST*PRSYIA
Trigger: TGCAATGTAGGACCTGGGGCAGGTACTCAGTGTGGT...GGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CTACACCCCTTCCCTGGCTTCATCTTTCTCCATGCGTCACCCCACCTGCCATACAAGACAATGGAGAGGTaGCGGGCAGACACACAGGAG +
Preference number: 4 (lower is better)
Translates to: LHPFPGFIFLHASPHLPYKTMER*RADTQE
Trigger: CTCCTGTGTGTCTGCCCGGCACCTCTCCATTGTCTT...GTATGGCAGGTGGGGTGACGCATGGAGAAAGATGAAGCCAGGGAAGGGGTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GGTACTGCTGAATGGCAGGCTAAGCTCAGGCTGGAAACCCTGACCTCCTGCCATCTCAGCCTCCCTAAGTaGTGGGATTACAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GTAEWQAKLRLETLTSCHLSLPK*WDYRQE
Trigger: CTCCTGCCTGTAATCCCAGCACTTAGGGAGGCTGAG...ATGGCAGGAGGTCAGGGTTTCCAGCCTGAGCTTAGCCTGCCATTCAGCAGTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp ACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCATAACGTGCTCCCCCTaGCCCTCAAAGACGTCCACA +
Preference number: 4 (lower is better)
Translates to: THMARAMIRGWFGWFTVAITCSP*PSKTST
Trigger: TGTGGACGTCTTTGAGGGGCAGGGGGAGCACGTTAT...GGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAAAGCAGACTCCTaGCTTCTCCTCTCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: AHGESDDSGLVWLVHCGPLKADS*LLLSSP
Trigger: TGGGGAGGAGAGGAGAAGGCAGGAGTCTGCTTTCAG...TGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CAACCAGCGTGGCTTCGGCCAGTTAACAGACCACTTCTTGGAGTCATGAGGATTGAAGCTCACCCTGCCTaGTCTCCGCCTCCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: QPAWLRPVNRPLLGVMRIEAHPA*SPPPLQ
Trigger: CTGCAAGGGAGGCGGAGAGCAGGCAGGGTGAGCTTC...AATCCTCATGACTCCAAGAAGTGGTCTGTTAACTGGCCGAAGCCACGCTGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CAACCAGCGTGGCTTCGGCCAGTTAACAGACCACTTCTTGGAGTCATGAGGATTCCTCTGCCTCCCTGCTaGTGCTGCTCTGGGGAACCA +
Preference number: 4 (lower is better)
Translates to: QPAWLRPVNRPLLGVMRIPLPPC*CCSGEP
Trigger: TGGTTCCCCAGAGCAGCAGCAGCAGGGAGGCAGAGG...AATCCTCATGACTCCAAGAAGTGGTCTGTTAACTGGCCGAAGCCACGCTGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CCAGTGATGAAGCTCCCCAAGCTTCACTTGACTCTGAGGATCTTCTACGCCAGGCCGAAGTTGGCTCCCTaGTCACTGAGGAGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: PVMKLPKLHLTLRIFYARPKLAP*SLRSGC
Trigger: GCACCCACTCCTCAGTGAGCAGGGAGCCAACTTCGG...CCTGGCGTAGAAGATCCTCAGAGTCAAGTGAAGCTTGGGGAGCTTCATCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GCCAAGCACACCCCTGAGAAACTGGAAAGGGCAAAGTTTGATGTCTTTCCTAGTAGGAGGAGTCCTGCCTaGTGGCCTGGCCCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: AKHTPEKLERAKFDVFPSRRSPA*WPGPEA
Trigger: GGCCTCAGGGCCAGGCCAGCAGGCAGGACTCCTCCT...ACTAGGAAAGACATCAAACTTTGCCCTTTCCAGTTTCTCAGGGGTGTGCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTGGGATGAGGAGACAGAGTaGTTCCCCATCAGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: GLVGSLWPTEHSSLASVWDEETE*FPIRGD
Trigger: GTCACCTCTGATGGGGAAGCACTCTGTCTCCTCATC...CCACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCGAGATTGTGCCATTaGGCTCCAGCCTGGACAACA +
Preference number: 4 (lower is better)
Translates to: FGVGLVGSLWPTEHSSLASRLCH*APAWTT
Trigger: TGTTGTCCAGGCTGGAGCGCAATGGCACAATCTCGA...GGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp AGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTCCGGGAGGTGGAGGTTaGAGTGAGCCGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: RNAHGESDDSGLVWLVHCPGGGG*SEPRSH
Trigger: GTGCGATCTCGGCTCACTGCAACCTCCACCTCCCGG...ACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCTTAAACAGTCTGCAGTaGATCCATGTGAGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: SSLASVWQIHPLGAMAQALNSLQ*IHVRGG
Trigger: ACCTCCCCTCACATGGATGCACTGCAGACTGTTTAA...GGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CCAGGGTGGGCACCTTCTTGTCACTCAATGTCACTGTCTTACAGAGGTGTCCCCGGCGTGACCCAACTGTaGCTCGTTACCCGTTTCCGA +
Preference number: 4 (lower is better)
Translates to: PGWAPSCHSMSLSYRGVPGVTQL*LVTRFR
Trigger: TCGGAAACGGGTAACGAGGCACAGTTGGGTCACGCC...GGGGACACCTCTGTAAGACAGTGACATTGAGTGACAAGAAGGTGCCCACCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp AAACCAAAACCAGGGCTGTTGCTGCAAAAAGGAGGCCTGGGTGCTGAGGACGCATGCTTCCCGGGTTCATaGCATTCTCCTGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: KPKPGLLLQKGGLGAEDACFPGS*HSPASA
Trigger: GGCTGAGGCAGGAGAATGGCATGAACCCGGGAAGCA...TGCGTCCTCAGCACCCAGGCCTCCTTTTTGCAGCAACAGCCCTGGTTTTGGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTGCCCAAAACAGGTCATaGCCCTGGAGTGGCCTCGCA +
Preference number: 4 (lower is better)
Translates to: ESDDSGLVWLVHCGPLNTAQNRS*PWSGLA
Trigger: TGCGAGGCCACTCCAGGGGCATGACCTGTTTTGGGC...AGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CCTCTAGGCTTCAGGGCACCTAAGTTCAGAGCTCAGCCCTCCATATTTCCCTGTCTGCTTGGTGATCTGTaGGTGACAGGCTGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: PLGFRAPKFRAQPSIFPCLLGDL*VTGCGP
Trigger: GGGCCCACAGCCTGTCACCCACAGATCACCAAGCAG...ACAGGGAAATATGGAGGGCTGAGCTCTGAACTTAGGTGCCCTGAAGCCTAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACGGAGGTGCAGGGAGTTaGCATCGTCACCTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: HMARAMIRGWFGWFTVAHGGAGS*HRHLEA
Trigger: AGCTTCAAGGTGACGATGCCAACTCCCTGCACCTCC...GTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR CCA 90 bp TCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCGTCGTCTGTCAGCAATaGTTCTATCTAAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SSLASVWQIHPLGAMAQAVVCQQ*FYLRGC
Trigger: GCAGCCTCTTAGATAGAACCATTGCTGACAGACGAC...GGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR CCA 90 bp GCTCCTAGGAGAGTAGGTGGCCAGGTCCCGATGCAGGCTCCAGCCCAGCAGGCCGGGATCGCTGAAGTCTaGCAAAGTAATTGTATTAAG +
Preference number: 4 (lower is better)
Translates to: APRRVGGQVPMQAPAQQAGIAEV*QSNCIK
Trigger: CTTAATACAATTACTTTGCCAGACTTCAGCGATCCC...GGCCTGCTGGGCTGGAGCCTGCATCGGGACCTGGCCACCTACTCTCCTAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GAACACTCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCAGACATTGTGGGACATTaGGAAGAGGTTGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: EHSSLASVWQIHPLGAMADIVGH*EEVGSF
Trigger: GAAGCTGCCAACCTCTTCCCAATGTCCCACAATGTC...TGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGAGTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR CCA 90 bp ACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCTGCATGCTCTTCACGTaGGTGGGGCTGATGGCTAAG +
Preference number: 4 (lower is better)
Translates to: THMARAMIRGWFGWFTVACMLFT*VGLMAK
Trigger: CTTAGCCATCAGCCCCACCCACGTGAAGAGCATGCA...GGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR CCA 90 bp GTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTGCATGCTCTTCACGTaGGTGGGGCTGATGGCTAAG +
Preference number: 4 (lower is better)
Translates to: VGLVGSLWPTEHSSLASVCMLFT*VGLMAK
Trigger: CTTAGCCATCAGCCCCACCCACGTGAAGAGCATGCA...CACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR CCA 90 bp GGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGATTCGGGGTTGGTTTaGTTGGTTCACTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: GVGLVGSLWPTEHSSLASDSGLV*LVHCGP
Trigger: TGGGCCACAGTGAACCAACCAAACCAACCCCGAATC...TGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CCA 90 bp GGTACTGCTGAATGGCAGGCTAAGCTCAGGCTGGAAACCCTGACCTCCTGCCATGTGCAGGAGGCTGCTTaGGCAGGACTGAATTGCATG +
Preference number: 4 (lower is better)
Translates to: GTAEWQAKLRLETLTSCHVQEAA*AGLNCM
Trigger: CATGCAATTCAGTCCTGCCCAAGCAGCCTCCTGCAC...ATGGCAGGAGGTCAGGGTTTCCAGCCTGAGCTTAGCCTGCCATTCAGCAGTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CCTCTAGGCTTCAGGGCACCTAAGTTCAGAGCTCAGCCCTCCATATTTCCCTGTCTTGAGCCATGTGGGTaGAGAGTGGGGGTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: PLGFRAPKFRAQPSIFPCLEPCG*RVGVVP
Trigger: GGGAACCACCCCCACTCTCCACCCACATGGCTCAAG...ACAGGGAAATATGGAGGGCTGAGCTCTGAACTTAGGTGCCCTGAAGCCTAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp TGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGCGGATGGATGGACGGATaGATGAATGTCCTTAGTTGG +
Preference number: 4 (lower is better)
Translates to: WPQCGRFIPLGRWHKPWCGWMDG*MNVLSW
Trigger: CCAACTAAGGACATTCATCCATCCGTCCATCCATCC...GCACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp ACTCCCTACACCCCTTCCCTGGCTTCATCTTTCTCCATGCGTCACCCCACCTGCATCCTCTTGGCTGAGTaGGGCGGCTCCTTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: TPYTPSLASSFSMRHPTCILLAE*GGSFKE
Trigger: TTCTTTGAAGGAGCCGCCCCACTCAGCCAAGAGGAT...GCAGGTGGGGTGACGCATGGAGAAAGATGAAGCCAGGGAAGGGGTGTAGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GGTACTGCTGAATGGCAGGCTAAGCTCAGGCTGGAAACCCTGACCTCCTGCCATCGGACAGGGCAGACGTaGAGAACTCCAAGGATGATG +
Preference number: 4 (lower is better)
Translates to: GTAEWQAKLRLETLTSCHRTGQT*RTPRMM
Trigger: CATCATCCTTGGAGTTCTCCACGTCTGCCCTGTCCG...ATGGCAGGAGGTCAGGGTTTCCAGCCTGAGCTTAGCCTGCCATTCAGCAGTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CCAGGGTGGGCACCTTCTTGTCACTCAATGTCACTGTCTTACAGAGGTGTCCCCATTGGAGGGAGACAGTaGCCAGAGTGGCTGACCCTG +
Preference number: 4 (lower is better)
Translates to: PGWAPSCHSMSLSYRGVPIGGRQ*PEWLTL
Trigger: CAGGGTCAGCCACTCTGGCCACTGTCTCCCTCCAAT...GGGGACACCTCTGTAAGACAGTGACATTGAGTGACAAGAAGGTGCCCACCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp TCACCAGGAAACCCTATTGTCCTCAGGGGGTCAAGGGCCAAACAGCAGAAGATGGAGAAGGTGGCGATATaGAGAGAGGGGGCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: SPGNPIVLRGSRAKQQKMEKVAI*REGAEW
Trigger: CCACTCGGCCCCCTCTCTCCATATCGCCACCTTCTC...CATCTTCTGCTGTTTGGCCCTTGACCCCCTGAGGACAATAGGGTTTCCTGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp AGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTGCCCATTTTCCTGTGTaGGGTCCTCAGGCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: SDDSGLVWLVHCGPLNTRAHFPV*GPQAQC
Trigger: GCACTGGGCCTGAGGACCCCACACAGGAAAATGGGC...ACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp AAACCAAAACCAGGGCTGTTGCTGCAAAAAGGAGGCCTGGGTGCTGAGGACGCAAGGCAAAGACAAGAGTaGTGGCGGTCACAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: KPKPGLLLQKGGLGAEDARQRQE*WRSQRP
Trigger: GGGCCTCTGTGACCGCCACCACTCTTGTCTTTGCCT...TGCGTCCTCAGCACCCAGGCCTCCTTTTTGCAGCAACAGCCCTGGTTTTGGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CTACACCCCTTCCCTGGCTTCATCTTTCTCCATGCGTCACCCCACCTGCCATACGTAGCTGTGCCTTCCTaGGTACTGCTGAATGGCAGG +
Preference number: 4 (lower is better)
Translates to: LHPFPGFIFLHASPHLPYVAVPS*VLLNGR
Trigger: CCTGCCATTCAGCAGTACCCAGGAAGGCACAGCTAC...GTATGGCAGGTGGGGTGACGCATGGAGAAAGATGAAGCCAGGGAAGGGGTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CTTACAGAGGTGTCCCCGACCAGCCAATCTAAAGTAACCCTCCCCCTGTCACTTAGGTTCAGGCTGGGCTaGGTGCTCAGGAAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LTEVSPTSQSKVTLPLSLRFRLG*VLRKPP
Trigger: TGGAGGCTTCCTGAGCACCCAGCCCAGCCTGAACCT...AAGTGACAGGGGGAGGGTTACTTTAGATTGGCTGGTCGGGGACACCTCTGTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGGAGTGGCTAAGAGTATaGATTCTGGAGTCAGGCAAC +
Preference number: 4 (lower is better)
Translates to: LASVWQIHPLGAMAQALVEWLRV*ILESGN
Trigger: GTTGCCTGACTCCAGAATCCATACTCTTAGCCACTC...CACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGGCAGAGTCTAGCTACTaGAGCCAACCAGCGTGGCTT +
Preference number: 4 (lower is better)
Translates to: VGLVGSLWPTEHSSLASVAESSY*SQPAWL
Trigger: AAGCCACGCTGGTTGGCTCCAGTAGCTAGACTCTGC...CACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp AAACCAAAACCAGGGCTGTTGCTGCAAAAAGGAGGCCTGGGTGCTGAGGACGCACCATGGAAACAGGAATaGGTGACAGCCCCACGCTCC +
Preference number: 4 (lower is better)
Translates to: KPKPGLLLQKGGLGAEDAPWKQE*VTAPRS
Trigger: GGAGCGTGGGGCTGTCACCCATTCCTGTTTCCATGG...TGCGTCCTCAGCACCCAGGCCTCCTTTTTGCAGCAACAGCCCTGGTTTTGGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CAA 72 bp GCCAGCTGCCTCCCCCTCAGAGGCTCCACAGGCATTTaGTATTCAACCTGCCTGAAAGCAGACTCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: ASCLPLRGSTGI*YSTCLKADSCL
Trigger: AAGGCAGGAGTCTGCTTTCAGGCAGGTTGAATACAAAATGCCTGTGGAGCCTCTGAGGGGGAGGCAGCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CAA 72 bp TGTGACCCACAGCCCAGTGGTCACCAGGAAACCCTATaGTCCTCAGGGGGTCAAGGGCCAAACAGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: CDPQPSGHQETL*SSGGQGPNSRR
Trigger: TCTTCTGCTGTTTGGCCCTTGACCCCCTGAGGACAATAGGGTTTCCTGGTGACCACTGGGCTGTGGGTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CAA 72 bp CTTCCAGAAAGAACAGCCCTGCCGTCACCTTGCCTTTaGCCCCATGAGGCCCGTTTTAGACTTCTGACCCCC +
Preference number: 4 (lower is better)
Translates to: LPERTALPSPCL*PHEARFRLLTP
Trigger: GGGGGTCAGAAGTCTAAAACGGGCCTCATGGGGCAAAAGGCAAGGTGACGGCAGGGCTGTTCTTTCTGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp CAACCAGCGTGGCTTCGGCCAGTTAACAGACCACTTCTTGGAGTCATGAGGATTAGGATCGTCCAGAGGTaGCTGGCACGGTGGATCCTC +
Preference number: 4 (lower is better)
Translates to: QPAWLRPVNRPLLGVMRIRIVQR*LARWIL
Trigger: GAGGATCCACCGTGCCAGTCACCTCTGGACGATCCT...AATCCTCATGACTCCAAGAAGTGGTCTGTTAACTGGCCGAAGCCACGCTGGTTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp TTCCCCGGAGCTCAGCAATCTGGCCGCGCATGTAGAGGACATTGTGGGACATTGCACGGGCTCTCCGAGTaGGAGTGTAGGTTTTTGTGT +
Preference number: 4 (lower is better)
Translates to: FPGAQQSGRACRGHCGTLHGLSE*ECRFLC
Trigger: ACACAAAAACCTACACTCTCACTCGGAGAGCCCGTG...CAATGTCCCACAATGTCCTCTACATGCGCGGCCAGATTGCTGAGCTCCGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS-3UTR TCA 90 bp GAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGCCTGCAGACTGTACGTaGGCCCCAGAGCTAAGTAGC +
Preference number: 4 (lower is better)
Translates to: ETHMARAMIRGWFGWFTVPADCT*APELSS
Trigger: GCTACTTAGCTCTGGGGCTCACGTACAGTCTGCAGG...CACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000555005.5
CDS-3UTR TCA 90 bp GCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCATCAGGGCCATGTCGATaGTGTTCAGAGCGTCATGGT +
Preference number: 4 (lower is better)
Translates to: AHGESDDSGLVWLVHCGPSGPCR*CSERHG
Trigger: ACCATGACGCTCTGAACATCATCGACATGGCCCTGA...TGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR TCA 90 bp AGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCGGGCCTCGGCAGAGTaGCTGCAACTTCACTTTGGA +
Preference number: 4 (lower is better)
Translates to: SDDSGLVWLVHCGPLNTRRASAE*LQLHFG
Trigger: TCCAAAGTGAAGTTGCAGTCACTCTGCCGAGGCCCG...ACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR TCA 90 bp GAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGCGGGCCTCGGCAGAGTaGCTGCAACTTCACTTTGGA +
Preference number: 4 (lower is better)
Translates to: ETHMARAMIRGWFGWFTVRASAE*LQLHFG
Trigger: TCCAAAGTGAAGTTGCAGTCACTCTGCCGAGGCCCG...CACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR TCA 90 bp TCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTAATCACTGGGGTTGGTaGGGTTGTAGCAGGATTTCC +
Preference number: 4 (lower is better)
Translates to: SGLVWLVHCGPLNTRPWPNHWGW*GCSRIS
Trigger: GGAAATCCTGCTACAACCTCACCAACCCCAGTGATT...AGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR TCA 90 bp CAACCAGCGTGGCTTCGGCCAGTTAACAGACCACTTCTTGGAGTCATGAGGATTTGCCTGCTCCACTCTTaGGGCTGCTACCGATGTGGC +
Preference number: 4 (lower is better)
Translates to: QPAWLRPVNRPLLGVMRICLLHS*GCYRCG
Trigger: GCCACATCGGTAGCAGCCTCAAGAGTGGAGCAGGCA...AATCCTCATGACTCCAAGAAGTGGTCTGTTAACTGGCCGAAGCCACGCTGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp AGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTTGCCTGCTCCACTCTTaGGGCTGCTACCGATGTGGC +
Preference number: 4 (lower is better)
Translates to: RNAHGESDDSGLVWLVHCCLLHS*GCYRCG
Trigger: GCCACATCGGTAGCAGCCTCAAGAGTGGAGCAGGCA...ACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR TCA 90 bp CCAGTGATGAAGCTCCCCAAGCTTCACTTGACTCTGAGGATCTTCTACGCCAGGCCAAACAGCAGAAGATaGGGGAGACGAGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: PVMKLPKLHLTLRIFYARPNSRR*GRRGGW
Trigger: CCACCCTCCTCGTCTCCCTCATCTTCTGCTGTTTGG...CCTGGCGTAGAAGATCCTCAGAGTCAAGTGAAGCTTGGGGAGCTTCATCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp AACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCGAGGCTGCAGTGAACTaGGATCGTGCCACTGTACTC +
Preference number: 4 (lower is better)
Translates to: NAHGESDDSGLVWLVHCGEAAVN*DRATVL
Trigger: GAGTACAGTGGCACGATCTCAGTTCACTGCAGCCTC...GCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp ACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCGCAGCAACAGGCAGCTaGTACAGTGGGTGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: THMARAMIRGWFGWFTVAAATGS*YSGCRF
Trigger: AAACCTACACCCACTGTATCAGCTGCCTGTTGCTGC...GGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp CATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGTTCGTTACCCGTTTCTaGTGGCATGACCCGACTGCA +
Preference number: 4 (lower is better)
Translates to: HGESDDSGLVWLVHCGPLFVTRF*WHDPTA
Trigger: TGCAGTCGGGTCATGCCATCAGAAACGGGTAACGAA...CAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp AACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCCGAGGAGAAGCTCTaGCATGTCATCGTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: NAHGESDDSGLVWLVHCGPEEKL*HVIVGD
Trigger: ATCGCCAACGATGACATGGCAGAGCTTCTCCTCGGG...GCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CCTGCTCCACTCTTGAGGCTGCTACCGATGTGGCATGGACGGAGCCTCTTTTCTCCGCAACAAGATCTCTaGCAGCTGCCTGGCTATTGT +
Preference number: 4 (lower is better)
Translates to: PAPLLRLLPMWHGRSLFSPQQDL*QLPGYC
Trigger: ACAATAGCCAGGCAGCTGGCAGAGATCTTGTTGCGG...AGAAAAGAGGCTCCGTCCATGCCACATCGGTAGCAGCCTCAAGAGTGGAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS-3UTR GCA 90 bp TCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTTTGTGTTTGCTCCTTTaGGGAGAGGATCGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: SGLVWLVHCGPLNTRPWPLCLLL*GEDRPE
Trigger: CTCTGGACGATCCTCTCCGCAAAGGAGCAAACACAA...AGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000555005.5
CDS-3UTR GCA 90 bp CCAGGGTGGGCACCTTCTTGTCACTCAATGTCACTGTCTTACAGAGGTGTCCCCTGTGTTCAGGTATCCTaGTCAGCACAGCGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: PGWAPSCHSMSLSYRGVPCVQVS*SAQRPG
Trigger: ACCGGGACGCTGTGCTGAGCAGGATACCTGAACACA...GGGGACACCTCTGTAAGACAGTGACATTGAGTGACAAGAAGGTGCCCACCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTTAGGGGCACTGCTCTaGAGAGACGAAGCCACTTCC +
Preference number: 4 (lower is better)
Translates to: DDSGLVWLVHCGPLNTRPLGALL*RDEATS
Trigger: GGAAGTGGCTTCGTCTCTGCAGAGCAGTGCCCCTAA...GGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp GAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTATGGAGCCAGATCTGTaGCAGCGTCATCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: ESDDSGLVWLVHCGPLNTMEPDL*QRHPGV
Trigger: CACCCCTGGATGACGCTGGCACAGATCTGGCTCCAT...AGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp AGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTACAGGCTGTGGCTTCTaGAGGCTTCCCGATGCCGAT +
Preference number: 4 (lower is better)
Translates to: SDDSGLVWLVHCGPLNTRTGCGF*RLPDAD
Trigger: ATCGGCATCGGGAAGCCTGCAGAAGCCACAGCCTGT...ACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR GCA 90 bp TTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTTGGCAAGAGGGCTGCTaGAGTTCCAGCCTCACTTCT +
Preference number: 4 (lower is better)
Translates to: LVWLVHCGPLNTRPWPQCWQEGC*SSSLTS
Trigger: AGAAGTGAGGCTGGAACTGCAGCAGCCCTCTTGCCA...ACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCTGCAGAATAACGTaGTCCCCCTGCCCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: ETHMARAMIRGWFGWFTVACRIT*SPCPSK
Trigger: CTTTGAGGGGCAGGGGGAGCACGTTATTCTGCAGGC...CACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CCTATTTCCACATCCTTCTCTCTGAATGCAAGTCACCAAGTCCAGCCCACACTCCCAGGAAGCTCACCCTaGCTGCTCTCCGCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: PISTSFSLNASHQVQPTLPGSSP*LLSASL
Trigger: AAGGGAGGCGGAGAGCAGGCAGGGTGAGCTTCCTGG...GAGTGTGGGCTGGACTTGGTGACTTGCATTCAGAGAGAAGGATGTGGAAATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTGCTGGAAACACAAGGTaGTCAGCGAGGCCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: ESDDSGLVWLVHCGPLNTAGNTR*SARPPS
Trigger: TGAAGGCGGCCTCGCTGAGCACCTTGTGTTTCCAGC...AGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCAGGTCAAGTGTGTGGCTaGTTCTGGAGTAGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: AHGESDDSGLVWLVHCGPGQVCG*FWSRQD
Trigger: ATCCTGCCTACTCCAGAAGCAGCCACACACTTGACC...TGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CTTACAGAGGTGTCCCCGACCAGCCAATCTAAAGTAACCCTCCCCCTGTCACTTGATGGGAGCCTCCTGTaGTGTGACCAAGTGGGACAG +
Preference number: 4 (lower is better)
Translates to: LTEVSPTSQSKVTLPLSLDGSLL*CDQVGQ
Trigger: CTGTCCCACTTGGTCACAGCACAGGAGGCTCCCATC...AAGTGACAGGGGGAGGGTTACTTTAGATTGGCTGGTCGGGGACACCTCTGTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CTACACCCCTTCCCTGGCTTCATCTTTCTCCATGCGTCACCCCACCTGCCATACAGTGAACTGAGATCGTaGCACTGTACTCCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: LHPFPGFIFLHASPHLPYSELRS*HCTPAS
Trigger: CGAGGCTGGAGTACAGTGGCACGATCTCAGTTCACT...GTATGGCAGGTGGGGTGACGCATGGAGAAAGATGAAGCCAGGGAAGGGGTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGCTGGGAGGTGGAGGCTaGAGTGAACTGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: ETHMARAMIRGWFGWFTVLGGGG*SELRSC
Trigger: GCACGATCTCAGTTCACTGCAGCCTCCACCTCCCAG...CACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CCTCTAGGCTTCAGGGCACCTAAGTTCAGAGCTCAGCCCTCCATATTTCCCTGTGGAGCTCTGTCCATCTaGCAGTGCAGACAGGCACAG +
Preference number: 4 (lower is better)
Translates to: PLGFRAPKFRAQPSIFPCGALSI*QCRQAQ
Trigger: CTGTGCCTGTCTGCACTGGCAGATGGACAGAGCTCC...ACAGGGAAATATGGAGGGCTGAGCTCTGAACTTAGGTGCCCTGAAGCCTAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CCTATTTCCACATCCTTCTCTCTGAATGCAAGTCACCAAGTCCAGCCCACACTCAGCCATGGGGTCGCCTaGTGCCTCCCGGTTACCCAT +
Preference number: 4 (lower is better)
Translates to: PISTSFSLNASHQVQPTLSHGVA*CLPVTH
Trigger: ATGGGTAACCGGGAGGCAGCAGGCGACCCCATGGCT...GAGTGTGGGCTGGACTTGGTGACTTGCATTCAGAGAGAAGGATGTGGAAATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTGAGATTCACCCATGTTaGTGCAGGCACCAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: LVWLVHCGPLNTRPWPQCEIHPC*CRHQAP
Trigger: AGGGGCTTGGTGCCTGCAGCAACATGGGTGAATCTC...ACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGTCTCTGCCAGCTGCCTaGCTATTGTCATTCGCAGGT +
Preference number: 4 (lower is better)
Translates to: HGESDDSGLVWLVHCGPLSLPAA*LLSFAG
Trigger: ACCTGCGAATGACAATAGCCAGGCAGCTGGCAGAGA...CAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp AAACCAAAACCAGGGCTGTTGCTGCAAAAAGGAGGCCTGGGTGCTGAGGACGCAGGAGGTGCAGGGAGTTaGCATCGTCACCTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: KPKPGLLLQKGGLGAEDAGGAGS*HRHLEA
Trigger: AGCTTCAAGGTGACGATGCCAACTCCCTGCACCTCC...TGCGTCCTCAGCACCCAGGCCTCCTTTTTGCAGCAACAGCCCTGGTTTTGGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GGATTTCCATATCTGCAGCATGTGCTTACAAGTCAGCAGTGCCTCGTCCGGGCCGGAGGTGCAGGGAGTTaGCATCGTCACCTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: GFPYLQHVLTSQQCLVRAGGAGS*HRHLEA
Trigger: AGCTTCAAGGTGACGATGCCAACTCCCTGCACCTCC...GGCCCGGACGAGGCACTGCTGACTTGTAAGCACATGCTGCAGATATGGAAATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555239.5
CDS-3UTR CCA 90 bp GGTACTGCTGAATGGCAGGCTAAGCTCAGGCTGGAAACCCTGACCTCCTGCCATAGGTTGGCAGCTTCTTaGGTACAGGCTGTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GTAEWQAKLRLETLTSCHRLAAS*VQAVAS
Trigger: AGAAGCCACAGCCTGTACCCAAGAAGCTGCCAACCT...ATGGCAGGAGGTCAGGGTTTCCAGCCTGAGCTTAGCCTGCCATTCAGCAGTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGAGGTTGGCAGCTTCTTaGGTACAGGCTGTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: DSGLVWLVHCGPLNTRPWRLAAS*VQAVAS
Trigger: AGAAGCCACAGCCTGTACCCAAGAAGCTGCCAACCT...CCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR CCA 90 bp GAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTGCAGATTCATCCCCTTaGGGCGATGGCACAAGCCCT +
Preference number: 4 (lower is better)
Translates to: ESDDSGLVWLVHCGPLNTADSSP*GDGTSP
Trigger: AGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGC...AGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CCA 90 bp CACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTTGGTTGGTTCACTGTaGCCCACTGAACACTCGTCC +
Preference number: 4 (lower is better)
Translates to: HMARAMIRGWFGWFTVAHLVGSL*PTEHSS
Trigger: GGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAA...GTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CCA 90 bp GGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACGATTCGGGGTTGGTTTaGTTGGTTCACTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: GESDDSGLVWLVHCGPLNDSGLV*LVHCGP
Trigger: TGGGCCACAGTGAACCAACCAAACCAACCCCGAATC...GTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CCA 90 bp ACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCGATTCGGGGTTGGTTTaGTTGGTTCACTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: THMARAMIRGWFGWFTVADSGLV*LVHCGP
Trigger: TGGGCCACAGTGAACCAACCAAACCAACCCCGAATC...GGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CCA 90 bp GGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTGGGCGATGATTCGGGGTTaGTTTGGTTGGTTCACTGTG +
Preference number: 4 (lower is better)
Translates to: GLVGSLWPTEHSSLASVWAMIRG*FGWFTV
Trigger: CACAGTGAACCAACCAAACCAACCCCGAATCATCGC...CCACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CCA 90 bp CCAGGGTGGGCACCTTCTTGTCACTCAATGTCACTGTCTTACAGAGGTGTCCCCTGCAAAAAGGAGGCCTaGGTGCTGAGGACGCAGGAA +
Preference number: 4 (lower is better)
Translates to: PGWAPSCHSMSLSYRGVPCKKEA*VLRTQE
Trigger: TTCCTGCGTCCTCAGCACCCAGGCCTCCTTTTTGCA...GGGGACACCTCTGTAAGACAGTGACATTGAGTGACAAGAAGGTGCCCACCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp AGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTGGCTCCCGCTCTGACTaGACCGCTTTAGGTCACATG +
Preference number: 4 (lower is better)
Translates to: SDDSGLVWLVHCGPLNTRGSRSD*TALGHM
Trigger: CATGTGACCTAAAGCGGTCCAGTCAGAGCGGGAGCC...ACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CTTACAGAGGTGTCCCCGACCAGCCAATCTAAAGTAACCCTCCCCCTGTCACTTCTGGCAGAGAAGGTCTaGTACAGCGCCTGCACCATC +
Preference number: 4 (lower is better)
Translates to: LTEVSPTSQSKVTLPLSLLAEKV*YSACTI
Trigger: GATGGTGCAGGCGCTGTACCAGACCTTCTCTGCCAG...AAGTGACAGGGGGAGGGTTACTTTAGATTGGCTGGTCGGGGACACCTCTGTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGCTGATACTGGGGAGCTaGAGGGCTCTGGTTGTTAAG +
Preference number: 4 (lower is better)
Translates to: HGESDDSGLVWLVHCGPLLILGS*RALVVK
Trigger: CTTAACAACCAGAGCCCTCCAGCTCCCCAGTATCAG...CAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp TGGAGTAGGCAGGATGGACAGGGCAAGCAGACGCTAGGGGAGGGATGGGAGCAGATGAATGTCCTTAGTTaGGAAAGGCTCAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: WSRQDGQGKQTLGEGWEQMNVLS*ERLSRS
Trigger: TGACCTGCTGAGCCTTTCCCAACTAAGGACATTCAT...CTGCTCCCATCCCTCCCCTAGCGTCTGCTTGCCCTGTCCATCCTGCCTACTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACTATACACTGTTAGCATaGTCCACGAGGCCGCACCTG +
Preference number: 4 (lower is better)
Translates to: GESDDSGLVWLVHCGPLNYTLLA*STRPHL
Trigger: CAGGTGCGGCCTCGTGGACCATGCTAACAGTGTATA...GTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp AGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTAGGTTCCAGCCCATCTaGGTTCCTGTGAGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SDDSGLVWLVHCGPLNTRRFQPI*VPVRLP
Trigger: AGGGAGCCTCACAGGAACCCAGATGGGCTGGAACCT...ACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp AGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGCAATGATGACTGTGTaGCCGCCGGGGAGATGCGTG +
Preference number: 4 (lower is better)
Translates to: RETHMARAMIRGWFGWFTAMMTV*PPGRCV
Trigger: CACGCATCTCCCCGGCGGCCACACAGTCATCATTGC...AGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGGTTTACCCCTCTGTTTaGGGTCTGTCTTCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: DSGLVWLVHCGPLNTRPWVYPSV*GLSSQS
Trigger: GGACTGGGAAGACAGACCCCAAACAGAGGGGTAAAC...CCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp TCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTTCTTCCCTCTTCACATaGTCTGGTCCTTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: SGLVWLVHCGPLNTRPWPSSLFT*SGPCWQ
Trigger: TTGCCAGCAAGGACCAGACCATGTGAAGAGGGAAGA...AGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CAAAACTGCATCCCCAGCATGGCTCTGGTCAAGGTCACTGCCAACCTGCACACCGGCGGGTGGATCACTTaGAAGGATGTCTTGATCCAG +
Preference number: 4 (lower is better)
Translates to: QNCIPSMALVKVTANLHTGGWIT*KDVLIQ
Trigger: CTGGATCAAGACATCCTTCCAAGTGATCCACCCGCC...GGTGTGCAGGTTGGCAGTGACCTTGACCAGAGCCATGCTGGGGATGCAGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGTGGGGGTTAGGGCCTTaGGGTTTCTGGCTAGAAACA +
Preference number: 4 (lower is better)
Translates to: DSGLVWLVHCGPLNTRPWWGLGP*GFWLET
Trigger: TGTTTCTAGCCAGAAACCCCAAGGCCCTAACCCCCA...CCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp TGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGCACATCTAGGTTGAGCTaGATTTCAGAGGGTGGAATC +
Preference number: 4 (lower is better)
Translates to: WPQCGRFIPLGRWHKPWCTSRLS*ISEGGI
Trigger: GATTCCACCCTCTGAAATCCAGCTCAACCTAGATGT...GCACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS-3UTR CCA 90 bp TCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTGCTACCGATGTGGCATaGACGGAGCCTCTTTTCTAT +
Preference number: 4 (lower is better)
Translates to: SGLVWLVHCGPLNTRPWPATDVA*TEPLFY
Trigger: ATAGAAAAGAGGCTCCGTCCATGCCACATCGGTAGC...AGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS-3UTR CCA 90 bp AACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCAGGCTGCTACCGATGTaGCATGGACGGAGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: NAHGESDDSGLVWLVHCGRLLPM*HGRSLF
Trigger: AAAGAGGCTCCGTCCATGCCACATCGGTAGCAGCCT...GCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR CAA 72 bp GACATTGTGGGACATTGGGAAGAGGTTGGCAGCTTCTaGGGTACAGGCTGTGGCTTCTGCAGGCTTCCCGAT +
Preference number: 4 (lower is better)
Translates to: DIVGHWEEVGSF*GTGCGFCRLPD
Trigger: ATCGGGAAGCCTGCAGAAGCCACAGCCTGTACCCAAGAAGCTGCCAACCTCTTCCCAATGTCCCACAATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555005.5
3UTR CAA 72 bp CAATCTGGCCGCGCATGTAGAGGACATTGTGGGACATaGGGAAGAGGTTGGCAGCTTCTTGGGTACAGGCTG +
Preference number: 4 (lower is better)
Translates to: QSGRACRGHCGT*GRGWQLLGYRL
Trigger: CAGCCTGTACCCAAGAAGCTGCCAACCTCTTCCCAATGTCCCACAATGTCCTCTACATGCGCGGCCAGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS-3UTR TCA 90 bp GCAGGCAGAGAGTCTGGGCCCGCAATGATGACTGTGTGGCCGCCGGGGAGATGCAATTCAACTTGGCCATaGTCAGATTGGATTCTTGTA +
Preference number: 4 (lower is better)
Translates to: AGRESGPAMMTVWPPGRCNSTWP*SDWILV
Trigger: TACAAGAATCCAATCTGATCATGGCCAAGTTGAATT...GCATCTCCCCGGCGGCCACACAGTCATCATTGCGGGCCCAGACTCTCTGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp TGGAGTAGGCAGGATGGACAGGGCAAGCAGACGCTAGGGGAGGGATGGGAGCAGGTCATTCGCAGGTTTTaGGTCGTTCTTGTTTCAACT +
Preference number: 4 (lower is better)
Translates to: WSRQDGQGKQTLGEGWEQVIRRF*VVLVST
Trigger: AGTTGAAACAAGAACGACTCAAAACCTGCGAATGAC...CTGCTCCCATCCCTCCCCTAGCGTCTGCTTGCCCTGTCCATCCTGCCTACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTCAGGGCCATGTCGATaGTGTTCAGAGCGTCATGGT +
Preference number: 4 (lower is better)
Translates to: DDSGLVWLVHCGPLNTRPSGPCR*CSERHG
Trigger: ACCATGACGCTCTGAACATCATCGACATGGCCCTGA...GGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR TCA 90 bp GTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGAATCACTGGGGTTGGTaGGGTTGTAGCAGGATTTCC +
Preference number: 4 (lower is better)
Translates to: VGLVGSLWPTEHSSLASVNHWGW*GCSRIS
Trigger: GGAAATCCTGCTACAACCTCACCAACCCCAGTGATT...CACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR TCA 90 bp CATGTAGAGGACATTGTGGGACATTGGGAAGAGGTTGGCAGCTTCTTGGGTACATTCACTGTGGCCCACTaGACACTCGTCCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: HVEDIVGHWEEVGSFLGTFTVAH*TLVPGL
Trigger: GAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAA...TGTACCCAAGAAGCTGCCAACCTCTTCCCAATGTCCCACAATGTCCTCTACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS-3UTR TCA 90 bp ACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCGGAGCACAGCCCCACTaGAAGCTTGATTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: THMARAMIRGWFGWFTVAGAQPH*KLDLTS
Trigger: AGAAGTCAAATCAAGCTTTCAGTGGGGCTGTGCTCC...GGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp CCAGGGTGGGCACCTTCTTGTCACTCAATGTCACTGTCTTACAGAGGTGTCCCCAGAAAGGTGACGCAGTaGCGGAGCAGAGGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: PGWAPSCHSMSLSYRGVPRKVTQ*RSRGRK
Trigger: TTTCCTTCCTCTGCTCCGTCACTGCGTCACCTTTCT...GGGGACACCTCTGTAAGACAGTGACATTGAGTGACAAGAAGGTGCCCACCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp CAAAACTGCATCCCCAGCATGGCTCTGGTCAAGGTCACTGCCAACCTGCACACCTGTATTCAACCTGCCTaGAAGCAGACTCCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: QNCIPSMALVKVTANLHTCIQPA*KQTPAF
Trigger: GAAGGCAGGAGTCTGCTTTCAGGCAGGTTGAATACA...GGTGTGCAGGTTGGCAGTGACCTTGACCAGAGCCATGCTGGGGATGCAGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp AGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTCCCGGAGCTCAGCCCTaGCCTCTTCCTCTTTGTCTA +
Preference number: 4 (lower is better)
Translates to: RNAHGESDDSGLVWLVHCPGAQP*PLPLCL
Trigger: TAGACAAAGAGGAAGAGGTCAGGGCTGAGCTCCGGG...ACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp TTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCCTGCAGCTACGCTCTTaGAAGAGACTTCACCTTTTC +
Preference number: 4 (lower is better)
Translates to: FGVGLVGSLWPTEHSSLALQLRS*KRLHLF
Trigger: GAAAAGGTGAAGTCTCTTTCAAGAGCGTAGCTGCAG...GGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp AGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTTGGCTGACCCTGCCCTaGAATTCCTTCAGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: RETHMARAMIRGWFGWFTWLTLP*NSFSRA
Trigger: GGCCCTACTGAAGGAATTTCAGGGCAGGGTCAGCCA...AGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp TCACCAGGAAACCCTATTGTCCTCAGGGGGTCAAGGGCCAAACAGCAGAAGATGCAGGCTGGGCAGAGGTaGCTGTCCTCATCTGATTCT +
Preference number: 4 (lower is better)
Translates to: SPGNPIVLRGSRAKQQKMQAGQR*LSSSDS
Trigger: AGAATCAGATGAGGACAGTCACCTCTGCCCAGCCTG...CATCTTCTGCTGTTTGGCCCTTGACCCCCTGAGGACAATAGGGTTTCCTGGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp AAAAACAAGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGTGGGACAGGGATGCATaGCCCTCCTCAGGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: KNKRNAHGESDDSGLVWLWDRDA*PSSGLG
Trigger: GCCAAGGCCTGAGGAGGGTCATGCATCCCTGTCCCA...CAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCTTGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp CAACCAGCGTGGCTTCGGCCAGTTAACAGACCACTTCTTGGAGTCATGAGGATTGTCAGGAGAACAGCTTaGACCCAGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: QPAWLRPVNRPLLGVMRIVRRTA*TQEAEV
Trigger: AACCTCCGCCTCCTGGGTTCAAGCTGTTCTCCTGAC...AATCCTCATGACTCCAAGAAGTGGTCTGTTAACTGGCCGAAGCCACGCTGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACTTGTTTCTGATGGCGTaGCCCAACTGTGCCTCGTTA +
Preference number: 4 (lower is better)
Translates to: GESDDSGLVWLVHCGPLNLFLMA*PNCASL
Trigger: TAACGAGGCACAGTTGGGTCACGCCATCAGAAACAA...GTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp ACTCCCTACACCCCTTCCCTGGCTTCATCTTTCTCCATGCGTCACCCCACCTGCAATGCTGACCTTCATTaGCTGGTGAAGGTGATGTCC +
Preference number: 4 (lower is better)
Translates to: TPYTPSLASSFSMRHPTCNADLH*LVKVMS
Trigger: GGACATCACCTTCACCAGTCAATGAAGGTCAGCATT...GCAGGTGGGGTGACGCATGGAGAAAGATGAAGCCAGGGAAGGGGTGTAGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTGGCCTCTCCAGCCATGCTaGACTGTGAGTCAATTAAAC +
Preference number: 4 (lower is better)
Translates to: GLVGSLWPTEHSSLASVWPLQPC*TVSQLN
Trigger: GTTTAATTGACTCACAGTTCAGCATGGCTGGAGAGG...CCACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GGTACTGCTGAATGGCAGGCTAAGCTCAGGCTGGAAACCCTGACCTCCTGCCATCTTCCTGCTGCCATGTaGAGAAGGACATGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: GTAEWQAKLRLETLTSCHLPAAM*RRTCLP
Trigger: AGGCAAACATGTCCTTCTTCACATGGCAGCAGGAAG...ATGGCAGGAGGTCAGGGTTTCCAGCCTGAGCTTAGCCTGCCATTCAGCAGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CCTCTAGGCTTCAGGGCACCTAAGTTCAGAGCTCAGCCCTCCATATTTCCCTGTCTCTGTAGGACCTCCTaGATCCCTCGCAAAGAAGCG +
Preference number: 4 (lower is better)
Translates to: PLGFRAPKFRAQPSIFPCLCRTS*IPRKEA
Trigger: CGCTTCTTTGCGAGGGATGCAGGAGGTCCTACAGAG...ACAGGGAAATATGGAGGGCTGAGCTCTGAACTTAGGTGCCCTGAAGCCTAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTGTGGGCCCTCTGAAATaGAAGAAGCGCCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LVWLVHCGPLNTRPWPQCVGPLK*KKRLSL
Trigger: CAGAGAAAGGCGCTTCTTGCATTTCAGAGGGCCCAC...ACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000555005.5
CDS-3UTR GCA 90 bp GGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGCCTCGGCAGAGTGACTaGAACTTCACTTTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: GLVWLVHCGPLNTRPWPQPRQSD*NFTLEN
Trigger: GTTTTCCAAAGTGAAGTTGCAGTCACTCTGCCGAGG...CTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR GCA 90 bp GGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCATTCTATCTAAGAGGCTaGTCCCACGTCCAGAATCAC +
Preference number: 4 (lower is better)
Translates to: GVGLVGSLWPTEHSSLASFYLRG*SHVQNH
Trigger: GTGATTCTGGACGTGGGAGCAGCCTCTTAGATAGAA...TGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp GAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGTTAGGGGCACTGCTCTaGAGAGACGAAGCCACTTCC +
Preference number: 4 (lower is better)
Translates to: ETHMARAMIRGWFGWFTVLGALL*RDEATS
Trigger: GGAAGTGGCTTCGTCTCTGCAGAGCAGTGCCCCTAA...CACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp AGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTACAGGCTGTGGCTTCTaGAGGCTTCCCGATGCCGAT +
Preference number: 4 (lower is better)
Translates to: RETHMARAMIRGWFGWFTTGCGF*RLPDAD
Trigger: ATCGGCATCGGGAAGCCTGCAGAAGCCACAGCCTGT...AGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR GCA 90 bp CCTATTTCCACATCCTTCTCTCTGAATGCAAGTCACCAAGTCCAGCCCACACTCCCGGGCATGCTAGTGTaGGCCTGTGATCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: PISTSFSLNASHQVQPTLPGMLV*ACDPSY
Trigger: GTAGCTGGGATCACAGGCGCACACTAGCATGCCCGG...GAGTGTGGGCTGGACTTGGTGACTTGCATTCAGAGAGAAGGATGTGGAAATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp AGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTTGGTGGCAAGAGGGCTaGTGCAGTTCCAGCCTCACT +
Preference number: 4 (lower is better)
Translates to: RNAHGESDDSGLVWLVHCWWQEG*CSSSLT
Trigger: AGTGAGGCTGGAACTGCAGCAGCCCTCTTGCCACCA...ACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp AGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTCTCCTTCCTCACGCCTaGCCTGCTGGAAACACAAGG +
Preference number: 4 (lower is better)
Translates to: RNAHGESDDSGLVWLVHCLLPHA*PAGNTR
Trigger: CCTTGTGTTTCCAGCAGGGCAGGCGTGAGGAAGGAG...ACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTACGCTTTTGGGCTTCTaGTCACCATCCCTCTTAAAG +
Preference number: 4 (lower is better)
Translates to: SGLVWLVHCGPLNTRPWPTLLGF*SPSLLK
Trigger: CTTTAAGAGGGATGGTGAGCAGAAGCCCAAAAGCGT...AGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CTTACAGAGGTGTCCCCGACCAGCCAATCTAAAGTAACCCTCCCCCTGTCACTTATGGGCCAGCCCTTTTaGAAACTGGCTGGGCCTAGT +
Preference number: 4 (lower is better)
Translates to: LTEVSPTSQSKVTLPLSLMGQPF*KLAGPS
Trigger: ACTAGGCCCAGCCAGTTTGCAAAAGGGCTGGCCCAT...AAGTGACAGGGGGAGGGTTACTTTAGATTGGCTGGTCGGGGACACCTCTGTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CCTCTAGGCTTCAGGGCACCTAAGTTCAGAGCTCAGCCCTCCATATTTCCCTGTCTGTCCATCTGCCAGTaGAGACAGGCACAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: PLGFRAPKFRAQPSIFPCLSICQ*RQAQSR
Trigger: TCTGGACTGTGCCTGTCTGCACTGGCAGATGGACAG...ACAGGGAAATATGGAGGGCTGAGCTCTGAACTTAGGTGCCCTGAAGCCTAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCATAGCGGGATCTGACTaGATTTTGCATTCATGGGGG +
Preference number: 4 (lower is better)
Translates to: FGVGLVGSLWPTEHSSLAIAGSD*ILHSWG
Trigger: CCCCCATGAATGCAAAATGCAGTCAGATCCCGCTAT...GGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CAAAACTGCATCCCCAGCATGGCTCTGGTCAAGGTCACTGCCAACCTGCACACCCAGTGGCATAATCACTaGAGCCTTGACCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: QNCIPSMALVKVTANLHTQWHNH*SLDLPL
Trigger: AAGTGGGAGGTCAAGGCTGCAGTGATTATGCCACTG...GGTGTGCAGGTTGGCAGTGACCTTGACCAGAGCCATGCTGGGGATGCAGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CCAGTGATGAAGCTCCCCAAGCTTCACTTGACTCTGAGGATCTTCTACGCCAGGGGATCTGTCTGGAGATaGCAAGCTGCAGAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PVMKLPKLHLTLRIFYARGSVWR*QAAEPG
Trigger: ACCTGGCTCTGCAGCTTGCCATCTCCAGACAGATCC...CCTGGCGTAGAAGATCCTCAGAGTCAAGTGAAGCTTGGGGAGCTTCATCACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp AGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTATACCCCAGAGCCTCTaGGATCTGTCTGGAGATGGC +
Preference number: 4 (lower is better)
Translates to: SDDSGLVWLVHCGPLNTRIPQSL*DLSGDG
Trigger: GCCATCTCCAGACAGATCCCAGAGGCTCTGGGGTAT...ACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000555005.5
CDS-3UTR CCA 90 bp GGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTCGTCTGTCAGCAATaGTTCTATCTAAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GVGLVGSLWPTEHSSLASVVCQQ*FYLRGC
Trigger: GCAGCCTCTTAGATAGAACCATTGCTGACAGACGAC...TGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CCA 90 bp TTCCCCGGAGCTCAGCAATCTGGCCGCGCATGTAGAGGACATTGTGGGACATTGACATTGGGAAGAGGTTaGCAGCTTCTTGGGTACAGG +
Preference number: 4 (lower is better)
Translates to: FPGAQQSGRACRGHCGTLTLGRG*QLLGYR
Trigger: CCTGTACCCAAGAAGCTGCCAACCTCTTCCCAATGT...CAATGTCCCACAATGTCCTCTACATGCGCGGCCAGATTGCTGAGCTCCGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS-3UTR CCA 90 bp CACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACGACATTGTGGGACATTaGGAAGAGGTTGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: HMARAMIRGWFGWFTVAHDIVGH*EEVGSF
Trigger: GAAGCTGCCAACCTCTTCCCAATGTCCCACAATGTC...GTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR CCA 90 bp CTTACAGAGGTGTCCCCGACCAGCCAATCTAAAGTAACCCTCCCCCTGTCACTTTGCATGCTCTTCACGTaGGTGGGGCTGATGGCTAAG +
Preference number: 4 (lower is better)
Translates to: LTEVSPTSQSKVTLPLSLCMLFT*VGLMAK
Trigger: CTTAGCCATCAGCCCCACCCACGTGAAGAGCATGCA...AAGTGACAGGGGGAGGGTTACTTTAGATTGGCTGGTCGGGGACACCTCTGTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGGCGATGATTCGGGGTTaGTTTGGTTGGTTCACTGTG +
Preference number: 4 (lower is better)
Translates to: DSGLVWLVHCGPLNTRPWAMIRG*FGWFTV
Trigger: CACAGTGAACCAACCAAACCAACCCCGAATCATCGC...CCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CCA 90 bp CACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACGCGATGATTCGGGGTTaGTTTGGTTGGTTCACTGTG +
Preference number: 4 (lower is better)
Translates to: HMARAMIRGWFGWFTVAHAMIRG*FGWFTV
Trigger: CACAGTGAACCAACCAAACCAACCCCGAATCATCGC...GTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CCA 90 bp GATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTACACCTTCTTCTCATaGTGGCAAGAGGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: DDSGLVWLVHCGPLNTRPYTFFS*WQEGCC
Trigger: GCAGCAGCCCTCTTGCCACCATGAGAAGAAGGTGTA...GGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTATTTCCCTGTGTCCTaGAAAGGTGGGGCCACCCTA +
Preference number: 4 (lower is better)
Translates to: DDSGLVWLVHCGPLNTRPYFPVS*KGGATL
Trigger: TAGGGTGGCCCCACCTTTCCAGGACACAGGGAAATA...GGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp AGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGAGCCCACTCCAACCTaGCTTGACCCCACCTTAGTC +
Preference number: 4 (lower is better)
Translates to: RNAHGESDDSGLVWLVHCEPTPT*LDPTLV
Trigger: GACTAAGGTGGGGTCAAGCCAGGTTGGAGTGGGCTC...ACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp TCACCAGGAAACCCTATTGTCCTCAGGGGGTCAAGGGCCAAACAGCAGAAGATGACGGCCAGGCAGAACTaGGATTCCAGCCAGATCTGT +
Preference number: 4 (lower is better)
Translates to: SPGNPIVLRGSRAKQQKMTARQN*DSSQIC
Trigger: ACAGATCTGGCTGGAATCCCAGTTCTGCCTGGCCGT...CATCTTCTGCTGTTTGGCCCTTGACCCCCTGAGGACAATAGGGTTTCCTGGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GCCAAGCACACCCCTGAGAAACTGGAAAGGGCAAAGTTTGATGTCTTTCCTAGTTCACTGCCACCTGGGTaGGTGGAGGTTCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: AKHTPEKLERAKFDVFPSSLPPG*VEVQAG
Trigger: CCCAGCCTGAACCTCCACCCACCCAGGTGGCAGTGA...ACTAGGAAAGACATCAAACTTTGCCCTTTCCAGTTTCTCAGGGGTGTGCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CCAGTGATGAAGCTCCCCAAGCTTCACTTGACTCTGAGGATCTTCTACGCCAGGCAGTGTCCTCCAGGGTaGGCACCTTCTTGTCACTCA +
Preference number: 4 (lower is better)
Translates to: PVMKLPKLHLTLRIFYARQCPPG*APSCHS
Trigger: TGAGTGACAAGAAGGTGCCCACCCTGGAGGACACTG...CCTGGCGTAGAAGATCCTCAGAGTCAAGTGAAGCTTGGGGAGCTTCATCACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTTGGAGCCAACCAGCGTaGCTTCGGCCAGTTAACAGA +
Preference number: 4 (lower is better)
Translates to: ESDDSGLVWLVHCGPLNTWSQPA*LRPVNR
Trigger: TCTGTTAACTGGCCGAAGCCACGCTGGTTGGCTCCA...AGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CCAGGGTGGGCACCTTCTTGTCACTCAATGTCACTGTCTTACAGAGGTGTCCCCACCACCGCTAATGACTaGCTACCACACAGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: PGWAPSCHSMSLSYRGVPTTAND*LPHRGS
Trigger: GGAACCTCTGTGTGGTAGCCAGTCATTAGCGGTGGT...GGGGACACCTCTGTAAGACAGTGACATTGAGTGACAAGAAGGTGCCCACCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CCAGTGATGAAGCTCCCCAAGCTTCACTTGACTCTGAGGATCTTCTACGCCAGGCAGGCTGGGGTGCAGTaGCATAATCACTGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: PVMKLPKLHLTLRIFYARQAGVQ*HNHCSL
Trigger: AAGGCTGCAGTGATTATGCCACTGCACCCCAGCCTG...CCTGGCGTAGAAGATCCTCAGAGTCAAGTGAAGCTTGGGGAGCTTCATCACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GCCAAGCACACCCCTGAGAAACTGGAAAGGGCAAAGTTTGATGTCTTTCCTAGTGCCGGACAGAGAGCCTaGAGGAAGCTGGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: AKHTPEKLERAKFDVFPSAGQRA*RKLESG
Trigger: CCCAGACTCCAGCTTCCTCCAGGCTCTCTGTCCGGC...ACTAGGAAAGACATCAAACTTTGCCCTTTCCAGTTTCTCAGGGGTGTGCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GCTCCTAGGAGAGTAGGTGGCCAGGTCCCGATGCAGGCTCCAGCCCAGCAGGCCAGAGTTTTCTATAAATaGAATCACACAGCACGTTCT +
Preference number: 4 (lower is better)
Translates to: APRRVGGQVPMQAPAQQARVFYK*NHTARS
Trigger: AGAACGTGCTGTGTGATTCCATTTATAGAAAACTCT...GGCCTGCTGGGCTGGAGCCTGCATCGGGACCTGGCCACCTACTCTCCTAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CAA 72 bp TGCAGGGGTAGGGCTGGGCTGTGCTCGGCCATGTGCTaGTGTTTTACACACCCTCTGAATCTTTACAACCAC +
Preference number: 4 (lower is better)
Translates to: CRGRAGLCSAMC*CFTHPLNLYNH
Trigger: GTGGTTGTAAAGATTCAGAGGGTGTGTAAAACACAAGCACATGGCCGAGCACAGCCCAGCCCTACCCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp AAACCAAAACCAGGGCTGTTGCTGCAAAAAGGAGGCCTGGGTGCTGAGGACGCAAAAAATGTTCTCTCCTaGGTAGACACGGGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: KPKPGLLLQKGGLGAEDAKNVLS*VDTGSP
Trigger: CGGAGAGCCCGTGTCTACTCAGGAGAGAACATTTTT...TGCGTCCTCAGCACCCAGGCCTCCTTTTTGCAGCAACAGCCCTGGTTTTGGTTT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp CAACCAGCGTGGCTTCGGCCAGTTAACAGACCACTTCTTGGAGTCATGAGGATTAGGCTGTGGGCCCTCTaGAATGCAAGAAGCGCCTTT +
Preference number: 4 (lower is better)
Translates to: QPAWLRPVNRPLLGVMRIRLWAL*NARSAF
Trigger: AAAGGCGCTTCTTGCATTTCAGAGGGCCCACAGCCT...AATCCTCATGACTCCAAGAAGTGGTCTGTTAACTGGCCGAAGCCACGCTGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp AGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTAATGCTTCTGTGCTaGCAGCAGGAGGGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: RETHMARAMIRGWFGWFTVMLLC*QQEGKE
Trigger: CTCCTTGCCCTCCTGCTGTCAGCACAGAAGCATTAC...AGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR TCA 90 bp CATGTAGAGGACATTGTGGGACATTGGGAAGAGGTTGGCAGCTTCTTGGGTACACGGGCCTCGGCAGAGTaGCTGCAACTTCACTTTGGA +
Preference number: 4 (lower is better)
Translates to: HVEDIVGHWEEVGSFLGTRASAE*LQLHFG
Trigger: TCCAAAGTGAAGTTGCAGTCACTCTGCCGAGGCCCG...TGTACCCAAGAAGCTGCCAACCTCTTCCCAATGTCCCACAATGTCCTCTACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS-3UTR TCA 90 bp AGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTATTAAGGTGGGGGACTaGGGAGTCTGGAAGAGTGCC +
Preference number: 4 (lower is better)
Translates to: RNAHGESDDSGLVWLVHCIKVGD*GVWKSA
Trigger: GGCACTCTTCCAGACTCCTCAGTCCCCCACCTTAAT...ACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp AAAAACAAGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGTCATCCTTCACCACCTaGCCATCCCCCTCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: KNKRNAHGESDDSGLVWLSSFTT*PSPSPL
Trigger: CAGAGGGGAGGGGGATGGTCAGGTGGTGAAGGATGA...CAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCTTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp TGGAGTAGGCAGGATGGACAGGGCAAGCAGACGCTAGGGGAGGGATGGGAGCAGACTGAAAGCTTGATTTaGCTTCTGACCTCCAAAACA +
Preference number: 4 (lower is better)
Translates to: WSRQDGQGKQTLGEGWEQTESLI*LLTSKT
Trigger: TGTTTTGGAGGTCAGAAGTCAAATCAAGCTTTCAGT...CTGCTCCCATCCCTCCCCTAGCGTCTGCTTGCCCTGTCCATCCTGCCTACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp CTTACAGAGGTGTCCCCGACCAGCCAATCTAAAGTAACCCTCCCCCTGTCACTTCTGCGCCTTCTTTCCTaGTCTCTTCATTTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LTEVSPTSQSKVTLPLSLLRLLS*SLHFPA
Trigger: GGCTGGGAAATGAAGAGATCAGGAAAGAAGGCGCAG...AAGTGACAGGGGGAGGGTTACTTTAGATTGGCTGGTCGGGGACACCTCTGTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGCAAAGTGGCAGAACCTaGCGCTTTTGGGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: ETHMARAMIRGWFGWFTVQSGRT*RFWASA
Trigger: AGCAGAAGCCCAAAAGCGTCAGGTTCTGCCACTTTG...CACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGACTTTCTGGAACCTGTaGAGATGGTCACTTACCTGG +
Preference number: 4 (lower is better)
Translates to: DSGLVWLVHCGPLNTRPWTFWNL*RWSLTW
Trigger: CCAGGTAAGTGACCATCTTCACAGGTTCCAGAAAGT...CCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGTGCAGTGCATCCATGTaGGGGGAGGTTATGCTGTCT +
Preference number: 4 (lower is better)
Translates to: ETHMARAMIRGWFGWFTVCSASM*GEVMLS
Trigger: AGACAGCATAACCTCCCCTCACATGGATGCACTGCA...CACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTACCAGGGCCACATTGTaGGTGGACACTTTCACACTC +
Preference number: 4 (lower is better)
Translates to: ESDDSGLVWLVHCGPLNTTRATL*VDTFTL
Trigger: GAGTGTGAAAGTGTCCACTCACAATGTGGCCCTGGT...AGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GGTACTGCTGAATGGCAGGCTAAGCTCAGGCTGGAAACCCTGACCTCCTGCCATCTTGGAAGGATGTCTTaGTCCAGAGTAAAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GTAEWQAKLRLETLTSCHLGRMS*SRVKAP
Trigger: TGGAGCCTTTACTCTGGATCAAGACATCCTTCCAAG...ATGGCAGGAGGTCAGGGTTTCCAGCCTGAGCTTAGCCTGCCATTCAGCAGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp CTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGCGGTTTGGGTTTGTCTaGTGTTTTCTCATGATTACA +
Preference number: 4 (lower is better)
Translates to: LASVWQIHPLGAMAQALVRFGFV*CFLMIT
Trigger: TGTAATCATGAGAAAACATCAGACAAACCCAAACCG...CACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GGTTGTAGCAGGATTTCCATATCTGCAGCATGTGCTTACAAGTCAGCAGTGCCTAGGCTGTGGGCCCTCTaGCAGCATCTCATACTGGCC +
Preference number: 4 (lower is better)
Translates to: GCSRISISAACAYKSAVPRLWAL*QHLILA
Trigger: GGCCAGTATGAGATGCTGTCAGAGGGCCCACAGCCT...AGGCACTGCTGACTTGTAAGCACATGCTGCAGATATGGAAATCCTGCTACAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555239.5
CDS-3UTR TCA 90 bp GGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTGGATGGACGGAGCTAACTaGAAAAAGGGAAGGAAAACC +
Preference number: 4 (lower is better)
Translates to: GLVGSLWPTEHSSLASVWMDGAN*KKGRKT
Trigger: GGTTTTCCTTCCCTTTTTTCAGTTAGCTCCGTCCAT...CCACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553972.5
CDS-3UTR GCA 90 bp CCTATTTCCACATCCTTCTCTCTGAATGCAAGTCACCAAGTCCAGCCCACACTCGGTAGCGTAGGCTTCTaGGATCACCCGCAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: PISTSFSLNASHQVQPTLGSVGF*DHPQPV
Trigger: TACAGGCTGCGGGTGATCGCAGAAGCCTACGCTACC...GAGTGTGGGCTGGACTTGGTGACTTGCATTCAGAGAGAAGGATGTGGAAATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CCAGGGTGGGCACCTTCTTGTCACTCAATGTCACTGTCTTACAGAGGTGTCCCCTTGTGTTTGCTCCTTTaGGGAGAGGATCGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: PGWAPSCHSMSLSYRGVPLCLLL*GEDRPE
Trigger: CTCTGGACGATCCTCTCCGCAAAGGAGCAAACACAA...GGGGACACCTCTGTAAGACAGTGACATTGAGTGACAAGAAGGTGCCCACCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGTTCTATCTAAGAGGCTaGTCCCACGTCCAGAATCAC +
Preference number: 4 (lower is better)
Translates to: HGESDDSGLVWLVHCGPLFYLRG*SHVQNH
Trigger: GTGATTCTGGACGTGGGAGCAGCCTCTTAGATAGAA...CAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp CCAGTGATGAAGCTCCCCAAGCTTCACTTGACTCTGAGGATCTTCTACGCCAGGCAAAACCAGGGCTGTTaGTGCAAAAAGGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PVMKLPKLHLTLRIFYARQNQGC*CKKEAW
Trigger: CCAGGCCTCCTTTTTGCAGCAACAGCCCTGGTTTTG...CCTGGCGTAGAAGATCCTCAGAGTCAAGTGAAGCTTGGGGAGCTTCATCACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACCTTCTAAGAGGACTGTaGAGACATTGGACTGTGTGG +
Preference number: 4 (lower is better)
Translates to: HMARAMIRGWFGWFTVAHLLRGL*RHWTVW
Trigger: CCACACAGTCCAATGTCTGCACAGTCCTCTTAGAAG...GTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CCAGTGATGAAGCTCCCCAAGCTTCACTTGACTCTGAGGATCTTCTACGCCAGGATCTTCACAGTCCAGTaGCTCTCGCCACTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PVMKLPKLHLTLRIFYARIFTVQ*LSPLPP
Trigger: TGGAGGAAGTGGCGAGAGGCACTGGACTGTGAAGAT...CCTGGCGTAGAAGATCCTCAGAGTCAAGTGAAGCTTGGGGAGCTTCATCACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTTCTCAGCTCCCCTCTaGAGCTACGCTCTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: DDSGLVWLVHCGPLNTRPFSAPL*SYALER
Trigger: TCTTTCAAGAGCGTAGCTGCAGAGGGGAGCTGAGAA...GGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGGTCCCAAAAGATGCCTaGATCCTACTTTCTGGAACC +
Preference number: 4 (lower is better)
Translates to: DSGLVWLVHCGPLNTRPWVPKDA*ILLSGT
Trigger: GGTTCCAGAAAGTAGGATGCAGGCATCTTTTGGGAC...CCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTGATCTGACTGCATTTTaGATTCATGGGGGCACCGTC +
Preference number: 4 (lower is better)
Translates to: LVWLVHCGPLNTRPWPQCDLTAF*IHGGTV
Trigger: GACGGTGCCCCCATGAATGCAAAATGCAGTCAGATC...ACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGGAAGAAGGACATGTTTaGCTCCCCTTCCTCCATGAT +
Preference number: 4 (lower is better)
Translates to: VGLVGSLWPTEHSSLASVEEGHV*LPFLHD
Trigger: ATCATGGAGGAAGGGGAGGCAAACATGTCCTTCTTC...CACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGACTTCTCCTTCCTGCTaGCATGTGAAGAAGGACATG +
Preference number: 4 (lower is better)
Translates to: HGESDDSGLVWLVHCGPLTSPSC*HVKKDM
Trigger: CATGTCCTTCTTCACATGGCAGCAGGAAGGAGAAGT...CAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CCAGTGATGAAGCTCCCCAAGCTTCACTTGACTCTGAGGATCTTCTACGCCAGGATTCACCCATGTTGCTaGAGGCACCAAGCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: PVMKLPKLHLTLRIFYARIHPCC*RHQAPH
Trigger: ATGAGGGGCTTGGTGCCTGCAGCAACATGGGTGAAT...CCTGGCGTAGAAGATCCTCAGAGTCAAGTGAAGCTTGGGGAGCTTCATCACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGGACAGCATCTCATACTaGCCTCTTCTTCCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: HGESDDSGLVWLVHCGPLDSISY*PLLPRA
Trigger: TGCTCTTGGAAGAAGAGGCCAGTATGAGATGCTGTC...CAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000555005.5
CDS-3UTR CCA 90 bp TCCGGGCCTCGGCAGAGTGACTGCAACTTCACTTTGGAAAACAGTAGTATGAAACTGCTTGGTGATCTGTaGGTGACAGGCTGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: SGPRQSDCNFTLENSSMKLLGDL*VTGCGP
Trigger: GGGCCCACAGCCTGTCACCCACAGATCACCAAGCAG...TTTCATACTACTGTTTTCCAAAGTGAAGTTGCAGTCACTCTGCCGAGGCCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555239.5
CDS-3UTR CCA 90 bp CCTGCTCCACTCTTGAGGCTGCTACCGATGTGGCATGGACGGAGCCTCTTTTCTGTCGTCTGTCAGCAATaGTTCTATCTAAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: PAPLLRLLPMWHGRSLFSVVCQQ*FYLRGC
Trigger: GCAGCCTCTTAGATAGAACCATTGCTGACAGACGAC...AGAAAAGAGGCTCCGTCCATGCCACATCGGTAGCAGCCTCAAGAGTGGAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS-3UTR CCA 90 bp TTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTACATTGGGAAGAGGTTaGCAGCTTCTTGGGTACAGG +
Preference number: 4 (lower is better)
Translates to: LVWLVHCGPLNTRPWPQCTLGRG*QLLGYR
Trigger: CCTGTACCCAAGAAGCTGCCAACCTCTTCCCAATGT...ACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR CCA 90 bp TCACCAGGAAACCCTATTGTCCTCAGGGGGTCAAGGGCCAAACAGCAGAAGATGTTGGTTGGTTCACTGTaGCCCACTGAACACTCGTCC +
Preference number: 4 (lower is better)
Translates to: SPGNPIVLRGSRAKQQKMLVGSL*PTEHSS
Trigger: GGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAA...CATCTTCTGCTGTTTGGCCCTTGACCCCCTGAGGACAATAGGGTTTCCTGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGTTGGTTGGTTCACTGTaGCCCACTGAACACTCGTCC +
Preference number: 4 (lower is better)
Translates to: ETHMARAMIRGWFGWFTVLVGSL*PTEHSS
Trigger: GGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAA...CACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CCA 90 bp TTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTGCGATGATTCGGGGTTaGTTTGGTTGGTTCACTGTG +
Preference number: 4 (lower is better)
Translates to: LVWLVHCGPLNTRPWPQCAMIRG*FGWFTV
Trigger: CACAGTGAACCAACCAAACCAACCCCGAATCATCGC...ACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CCA 90 bp GCCAAGCACACCCCTGAGAAACTGGAAAGGGCAAAGTTTGATGTCTTTCCTAGTTCCTCCTTCCCTTCCTaGTCCATTCGCCACCCCACC +
Preference number: 4 (lower is better)
Translates to: AKHTPEKLERAKFDVFPSSSFPS*SIRHPT
Trigger: GGTGGGGTGGCGAATGGACCAGGAAGGGAAGGAGGA...ACTAGGAAAGACATCAAACTTTGCCCTTTCCAGTTTCTCAGGGGTGTGCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CCTCTAGGCTTCAGGGCACCTAAGTTCAGAGCTCAGCCCTCCATATTTCCCTGTCCATCTGGAGGAGTCTaGGTTGCTCCATGTGATCAC +
Preference number: 4 (lower is better)
Translates to: PLGFRAPKFRAQPSIFPCPSGGV*VAPCDH
Trigger: GTGATCACATGGAGCAACCCAGACTCCTCCAGATGG...ACAGGGAAATATGGAGGGCTGAGCTCTGAACTTAGGTGCCCTGAAGCCTAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp AGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTTGCAGGCAGAGAGTCTaGGCCCGCAATGATGACTGT +
Preference number: 4 (lower is better)
Translates to: RNAHGESDDSGLVWLVHCCRQRV*ARNDDC
Trigger: ACAGTCATCATTGCGGGCCCAGACTCTCTGCCTGCA...ACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp TTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTGGCCTCAAAGGCTTATaGTCAAGTGTGTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LVWLVHCGPLNTRPWPQCGLKGL*SSVWLL
Trigger: AAGCAGCCACACACTTGACCATAAGCCTTTGAGGCC...ACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCTCAGGAAGCCTCCATaGGCTTGGGGAGGTCATTTT +
Preference number: 4 (lower is better)
Translates to: ESDDSGLVWLVHCGPLNTLRKPP*AWGGHF
Trigger: AAAATGACCTCCCCAAGCCCATGGAGGCTTCCTGAG...AGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CCTCTAGGCTTCAGGGCACCTAAGTTCAGAGCTCAGCCCTCCATATTTCCCTGTAGCCCTTTTGCAAACTaGCTGGGCCTAGTCATCTGG +
Preference number: 4 (lower is better)
Translates to: PLGFRAPKFRAQPSIFPCSPFAN*LGLVIW
Trigger: CCAGATGACTAGGCCCAGCCAGTTTGCAAAAGGGCT...ACAGGGAAATATGGAGGGCTGAGCTCTGAACTTAGGTGCCCTGAAGCCTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAACACCCCTGAGAAACTaGAAAGGGCAAAGTTTGATG +
Preference number: 4 (lower is better)
Translates to: GVGLVGSLWPTEHSSLASTPLRN*KGQSLM
Trigger: CATCAAACTTTGCCCTTTCCAGTTTCTCAGGGGTGT...TGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp TCACCAGGAAACCCTATTGTCCTCAGGGGGTCAAGGGCCAAACAGCAGAAGATGTGCATTTTGCATTCATaGGGGCACCGTCTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: SPGNPIVLRGSRAKQQKMCILHS*GHRLAR
Trigger: CCTTGCCAGACGGTGCCCCCATGAATGCAAAATGCA...CATCTTCTGCTGTTTGGCCCTTGACCCCCTGAGGACAATAGGGTTTCCTGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp AACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCGGGCCACATTGTGAGTaGACACTTTCACACTCTGCA +
Preference number: 4 (lower is better)
Translates to: NAHGESDDSGLVWLVHCGGPHCE*TLSHSA
Trigger: TGCAGAGTGTGAAAGTGTCCACTCACAATGTGGCCC...GCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CTACACCCCTTCCCTGGCTTCATCTTTCTCCATGCGTCACCCCACCTGCCATACAGACAACCCTCCAAATaGTCAGTTAAGAACCAGGGC +
Preference number: 4 (lower is better)
Translates to: LHPFPGFIFLHASPHLPYRQPSK*SVKNQG
Trigger: GCCCTGGTTCTTAACTGACCATTTGGAGGGTTGTCT...GTATGGCAGGTGGGGTGACGCATGGAGAAAGATGAAGCCAGGGAAGGGGTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CAAAACTGCATCCCCAGCATGGCTCTGGTCAAGGTCACTGCCAACCTGCACACCTCACCCCATCATATCTaGGGGTACCTGGTATTCACA +
Preference number: 4 (lower is better)
Translates to: QNCIPSMALVKVTANLHTSPHHI*GYLVFT
Trigger: TGTGAATACCAGGTACCCCCAGATATGATGGGGTGA...GGTGTGCAGGTTGGCAGTGACCTTGACCAGAGCCATGCTGGGGATGCAGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGATTACACTGGAGTTATaGGTTTGGGGGAAGAAGACC +
Preference number: 4 (lower is better)
Translates to: GLVWLVHCGPLNTRPWPQITLEL*VWGKKT
Trigger: GGTCTTCTTCCCCCAAACCCATAACTCCAGTGTAAT...CTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACATTGAATCATGGGGGTaGCTACCCTCATGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: GESDDSGLVWLVHCGPLNIESWG*LPSCCS
Trigger: AGAACAGCATGAGGGTAGCCACCCCCATGATTCAAT...GTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp ACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCATGAAAGTATGCTTCTaGAGAGTTGCCTGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: THMARAMIRGWFGWFTVAMKVCF*RVACLG
Trigger: CCCGAGACAGGCAACTCTCCAGAAGCATACTTTCAT...GGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553972.5
3UTR CAA 72 bp AAGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTaGGTTTGGTTGGTTCACTGTGGCCCACTGAACACT +
Preference number: 4 (lower is better)
Translates to: KRNAHGESDDSG*VWLVHCGPLNT
Trigger: AGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
3UTR CAA 72 bp CAGATGGGGAGACTAAGACCAGGGAACAGGAACGCCTaGCCTAAGTTAGGGTCAGCACTAGTCCTGGAATCA +
Preference number: 4 (lower is better)
Translates to: QMGRLRPGNRNA*PKLGSALVLES
Trigger: TGATTCCAGGACTAGTGCTGACCCTAACTTAGGCAAGGCGTTCCTGTTCCCTGGTCTTAGTCTCCCCATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp ACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCTTCCAAGAGCAATGGTaGGTAAGTCATAGACCACAG +
Preference number: 4 (lower is better)
Translates to: THMARAMIRGWFGWFTVAFQEQW*VSHRPQ
Trigger: CTGTGGTCTATGACTTACTCACCATTGCTCTTGGAA...GGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000555005.5
CDS-3UTR TCA 90 bp GAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGAATCACTGGGGTTGGTaGGGTTGTAGCAGGATTTCC +
Preference number: 4 (lower is better)
Translates to: ETHMARAMIRGWFGWFTVNHWGW*GCSRIS
Trigger: GGAAATCCTGCTACAACCTCACCAACCCCAGTGATT...CACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR TCA 90 bp GCAATGGTTCTATCTAAGAGGCTGCTCCCACGTCCAGAATCACTGGGGTTGGTGAATCACTGGGGTTGGTaGGGTTGTAGCAGGATTTCC +
Preference number: 4 (lower is better)
Translates to: AMVLSKRLLPRPESLGLVNHWGW*GCSRIS
Trigger: GGAAATCCTGCTACAACCTCACCAACCCCAGTGATT...CACCAACCCCAGTGATTCTGGACGTGGGAGCAGCCTCTTAGATAGAACCATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555239.5
CDS-3UTR TCA 90 bp AGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTACATGGCGAGAGCGATaGTTCGGGGTTGGTTTGGTT +
Preference number: 4 (lower is better)
Translates to: RETHMARAMIRGWFGWFTTWRER*FGVGLV
Trigger: AACCAAACCAACCCCGAATCATCGCTCTCGCCATGT...AGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR TCA 90 bp GATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCCTGTATGGATTCCTATaGTGGAAAAATCTCGGGCCG +
Preference number: 4 (lower is better)
Translates to: DDSGLVWLVHCGPLNTRPLYGFL*WKNLGP
Trigger: CGGCCCGAGATTTTTCCATCATAGGAATCCATACAG...GGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp TTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTCCCCTGTTAAACTTCTaGCCTCTTCTCATCCTTCAC +
Preference number: 4 (lower is better)
Translates to: LVWLVHCGPLNTRPWPQCPLLNF*PLLILH
Trigger: GTGAAGGATGAGAAGAGGTCAGAAGTTTAACAGGGG...ACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp TGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGCAGTTTGTTCATCTTCTaGAGAGAGCTTCATTTCTCA +
Preference number: 4 (lower is better)
Translates to: WPQCGRFIPLGRWHKPWCSLFIF*RELHFS
Trigger: TGAGAAATGAAGCTCTCTTCAGAAGATGAACAAACT...GCACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp AGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCACATCCTTCTCTCTaGATGCAAGTCACCAAGTCC +
Preference number: 4 (lower is better)
Translates to: SDDSGLVWLVHCGPLNTRPHPSL*MQVTKS
Trigger: GGACTTGGTGACTTGCATTCAGAGAGAAGGATGTGG...ACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp AGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTAGAAGTCTTTGTATTTaGGGGGACTGCAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: RNAHGESDDSGLVWLVHCRSLCI*GDCREA
Trigger: GGCCTCCCTGCAGTCCCCTCAAATACAAAGACTTCT...ACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CAACCAGCGTGGCTTCGGCCAGTTAACAGACCACTTCTTGGAGTCATGAGGATTACCACAGATGCACTCTaGAGACTGATGAGGCGGTCA +
Preference number: 4 (lower is better)
Translates to: QPAWLRPVNRPLLGVMRITTDAL*RLMRRS
Trigger: TGACCGCCTCATCAGTCTGCAGAGTGCATCTGTGGT...AATCCTCATGACTCCAAGAAGTGGTCTGTTAACTGGCCGAAGCCACGCTGGTTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCCAGGATTTCCATATCTaGAGCATGTGCTTACAAGTC +
Preference number: 4 (lower is better)
Translates to: FGVGLVGSLWPTEHSSLAQDFHI*SMCLQV
Trigger: GACTTGTAAGCACATGCTGCAGATATGGAAATCCTG...GGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp TTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTTTCTATCTAAGAGGCTaGTCCCACGTCCAGAATCAC +
Preference number: 4 (lower is better)
Translates to: LVWLVHCGPLNTRPWPQCFYLRG*SHVQNH
Trigger: GTGATTCTGGACGTGGGAGCAGCCTCTTAGATAGAA...ACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp AAAAACAAGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGATCAGGGCCAGTCGCTaGATGCTCTTCACGTGGGTG +
Preference number: 4 (lower is better)
Translates to: KNKRNAHGESDDSGLVWLIRASR*MLFTWV
Trigger: CACCCACGTGAAGAGCATGCAGCGACTGGCCCTGAT...CAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCTTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR GCA 90 bp TTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTTCTGGTTCCGGATCTTaGTGTCTACTCTGTGGGATT +
Preference number: 4 (lower is better)
Translates to: LVWLVHCGPLNTRPWPQCSGSGS*CLLCGI
Trigger: AATCCCACAGAGTAGACAGCAAGATCCGGAACCAGA...ACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CCTCTAGGCTTCAGGGCACCTAAGTTCAGAGCTCAGCCCTCCATATTTCCCTGTCAAGCATGGGTCACATaGCCAAACCCAAACCAGTCA +
Preference number: 4 (lower is better)
Translates to: PLGFRAPKFRAQPSIFPCQAWVT*PNPNQS
Trigger: TGACTGGTTTGGGTTTGGGCATGTGACCCATGCTTG...ACAGGGAAATATGGAGGGCTGAGCTCTGAACTTAGGTGCCCTGAAGCCTAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CCAGTGATGAAGCTCCCCAAGCTTCACTTGACTCTGAGGATCTTCTACGCCAGGCAAAAGTCCCAGGGGTaGTTCTCATTGGCCAAGCAT +
Preference number: 4 (lower is better)
Translates to: PVMKLPKLHLTLRIFYARQKSQG*FSLAKH
Trigger: ATGCTTGGCCAATGAGAAGCACCCCTGGGACTTTTG...CCTGGCGTAGAAGATCCTCAGAGTCAAGTGAAGCTTGGGGAGCTTCATCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp AAAAACAAGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGTCCCCTCTGGGCCTTTaGACCTGCTGTTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: KNKRNAHGESDDSGLVWLSPLGL*TCCSCF
Trigger: GAAGCAGGAACAGCAGGTGCAAAGGCCCAGAGGGGA...CAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCTTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTTCCTGTCTGAAATGGTaGAGGATGTCCTTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: SGLVWLVHCGPLNTRPWPSCLKW*RMSFFC
Trigger: ACAGAAAAAGGACATCCTGCACCATTTCAGACAGGA...AGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp AGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTACCACCTCTGACAGCTaGCTGCAGACTCACATCTCA +
Preference number: 4 (lower is better)
Translates to: RNAHGESDDSGLVWLVHCTTSDS*LQTHIS
Trigger: TGAGATGTGAGTCTGCAGGCAGCTGTCAGAGGTGGT...ACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CATGTAGAGGACATTGTGGGACATTGGGAAGAGGTTGGCAGCTTCTTGGGTACACCTCTGGGATCTGTCTaGAGATGGCAAGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: HVEDIVGHWEEVGSFLGTPLGSV*RWQAAE
Trigger: CTCTGCAGCTTGCCATCTCCAGACAGATCCCAGAGG...TGTACCCAAGAAGCTGCCAACCTCTTCCCAATGTCCCACAATGTCCTCTACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS-3UTR CCA 90 bp AAAAACAAGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGCTTGGGTACAGGCTGTaGCTTCTGCAGGCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: KNKRNAHGESDDSGLVWLLGYRL*LLQASR
Trigger: TCGGGAAGCCTGCAGAAGCCACAGCCTGTACCCAAG...CAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCTTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR CCA 90 bp GAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGACATTGGGAAGAGGTTaGCAGCTTCTTGGGTACAGG +
Preference number: 4 (lower is better)
Translates to: ETHMARAMIRGWFGWFTVTLGRG*QLLGYR
Trigger: CCTGTACCCAAGAAGCTGCCAACCTCTTCCCAATGT...CACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR CCA 90 bp CCAGGGTGGGCACCTTCTTGTCACTCAATGTCACTGTCTTACAGAGGTGTCCCCTTGCTGTCTACTCTGTaGGATTCGGACTTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: PGWAPSCHSMSLSYRGVPLLSTL*DSDFGS
Trigger: TGAGCCAAAGTCCGAATCCCACAGAGTAGACAGCAA...GGGGACACCTCTGTAAGACAGTGACATTGAGTGACAAGAAGGTGCCCACCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CAAAACTGCATCCCCAGCATGGCTCTGGTCAAGGTCACTGCCAACCTGCACACCGGGGATGAAGTTGAATaGGAGAGATTTGAGATGCGA +
Preference number: 4 (lower is better)
Translates to: QNCIPSMALVKVTANLHTGDEVE*ERFEMR
Trigger: TCGCATCTCAAATCTCTCCCATTCAACTTCATCCCC...GGTGTGCAGGTTGGCAGTGACCTTGACCAGAGCCATGCTGGGGATGCAGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CAAAACTGCATCCCCAGCATGGCTCTGGTCAAGGTCACTGCCAACCTGCACACCTCCACTGGGCAGACCTaGGCACTTTTGAAATGTTTA +
Preference number: 4 (lower is better)
Translates to: QNCIPSMALVKVTANLHTSTGQT*ALLKCL
Trigger: TAAACATTTCAAAAGTGCCCAGGTCTGCCCAGTGGA...GGTGTGCAGGTTGGCAGTGACCTTGACCAGAGCCATGCTGGGGATGCAGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CCTATTTCCACATCCTTCTCTCTGAATGCAAGTCACCAAGTCCAGCCCACACTCATGGGAGCAGCCACCTaGTACAGTGCCCAAGACACA +
Preference number: 4 (lower is better)
Translates to: PISTSFSLNASHQVQPTLMGAAT*YSAQDT
Trigger: TGTGTCTTGGGCACTGTACCAGGTGGCTGCTCCCAT...GAGTGTGGGCTGGACTTGGTGACTTGCATTCAGAGAGAAGGATGTGGAAATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CCAGTGATGAAGCTCCCCAAGCTTCACTTGACTCTGAGGATCTTCTACGCCAGGCTGGGCCTAGTCATCTaGTACAAAGTGGCAGAACCT +
Preference number: 4 (lower is better)
Translates to: PVMKLPKLHLTLRIFYARLGLVI*YKVAEP
Trigger: AGGTTCTGCCACTTTGTACCAGATGACTAGGCCCAG...CCTGGCGTAGAAGATCCTCAGAGTCAAGTGAAGCTTGGGGAGCTTCATCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGAAGCCGTGGGTGAACTaGCTTCATTTCTATACAGGA +
Preference number: 4 (lower is better)
Translates to: DSGLVWLVHCGPLNTRPWKPWVN*LHFYTG
Trigger: TCCTGTATAGAAATGAAGCCAGTTCACCCACGGCTT...CCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CAACCAGCGTGGCTTCGGCCAGTTAACAGACCACTTCTTGGAGTCATGAGGATTATATCTATACTTGGCTaGGCGCTGTGGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: QPAWLRPVNRPLLGVMRIISILG*ALWLTP
Trigger: AGGCGTGAGCCACAGCGCCCAGCCAAGTATAGATAT...AATCCTCATGACTCCAAGAAGTGGTCTGTTAACTGGCCGAAGCCACGCTGGTTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GAACACTCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACTGTTGGTGGACATTTaGATTGTGATCAGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: EHSSLASVWQIHPLGAMALLVDI*IVISFW
Trigger: CCAAAAACTGATCACAATCCAAATGTCCACCAACAG...TGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGAGTGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp AGCAATCTGGCCGCGCATGTAGAGGACATTGTGGGACATTGGGAAGAGGTTGGCTTCCAAGAGCAATGGTaGGTAAGTCATAGACCACAG +
Preference number: 4 (lower is better)
Translates to: SNLAAHVEDIVGHWEEVGFQEQW*VSHRPQ
Trigger: CTGTGGTCTATGACTTACTCACCATTGCTCTTGGAA...GCCAACCTCTTCCCAATGTCCCACAATGTCCTCTACATGCGCGGCCAGATTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS-3UTR TCA 90 bp AAATTTTCTGGGTATTCACTCAGGGCCATGTCGATGATGTTCAGAGCGTCATGGCGGGCCTCGGCAGAGTaGCTGCAACTTCACTTTGGA +
Preference number: 4 (lower is better)
Translates to: KFSGYSLRAMSMMFRASWRASAE*LQLHFG
Trigger: TCCAAAGTGAAGTTGCAGTCACTCTGCCGAGGCCCG...CCATGACGCTCTGAACATCATCGACATGGCCCTGAGTGAATACCCAGAAAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555239.5
CDS-3UTR TCA 90 bp TCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTAAATTCCATGACTTATaGCCACTCAAAGCCACAAGT +
Preference number: 4 (lower is better)
Translates to: SGLVWLVHCGPLNTRPWPKFHDL*PLKATS
Trigger: ACTTGTGGCTTTGAGTGGTCATAAGTCATGGAATTT...AGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp ACTCCCTACACCCCTTCCCTGGCTTCATCTTTCTCCATGCGTCACCCCACCTGCACATTGCAAATTCCATaGCTTATGACCACTCAAAGC +
Preference number: 4 (lower is better)
Translates to: TPYTPSLASSFSMRHPTCTLQIP*LMTTQS
Trigger: GCTTTGAGTGGTCATAAGTCATGGAATTTGCAATGT...GCAGGTGGGGTGACGCATGGAGAAAGATGAAGCCAGGGAAGGGGTGTAGGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGTACAGAACTTCAATATaGGTGGTGTCCCCTCACTGG +
Preference number: 4 (lower is better)
Translates to: ETHMARAMIRGWFGWFTVYRTSI*VVSPHW
Trigger: CCAGTGAGGGGACACCACTCATATTGAAGTTCTGTA...CACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp AAAAACAAGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGTCCTTGCTGGCAATGTaGGGATGGGCCAATGTGAGG +
Preference number: 4 (lower is better)
Translates to: KNKRNAHGESDDSGLVWLSLLAM*GWANVR
Trigger: CCTCACATTGGCCCATCCTCACATTGCCAGCAAGGA...CAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCTTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp AAAAACAAGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTTCTCTCTGTGGATaGCATAGCCATGGGGTCGCC +
Preference number: 4 (lower is better)
Translates to: KNKRNAHGESDDSGLVWLVSLCG*HSHGVA
Trigger: GGCGACCCCATGGCTATGTCATCCACAGAGAGAAAC...CAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCTTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp CCTATTTCCACATCCTTCTCTCTGAATGCAAGTCACCAAGTCCAGCCCACACTCATGGTCTTGATCTCCTaGCCTCATGATCCACCCACC +
Preference number: 4 (lower is better)
Translates to: PISTSFSLNASHQVQPTLMVLIS*PHDPPT
Trigger: GGTGGGTGGATCATGAGGTCAGGAGATCAAGACCAT...GAGTGTGGGCTGGACTTGGTGACTTGCATTCAGAGAGAAGGATGTGGAAATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGCATCACTGGGAATGCTaGCCTTCATTGACTGGTGAA +
Preference number: 4 (lower is better)
Translates to: ETHMARAMIRGWFGWFTVHHWEC*PSLTGE
Trigger: TTCACCAGTCAATGAAGGTCAGCATTCCCAGTGATG...CACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GCAATGGCCCTGGACTATCCAGGGGGCCCAGAGCAACCAGCAGAGTCCTTAGAGAGTTCTCATGAGCTCTaGTGGTTTTATAAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: AMALDYPGGPEQPAESLESSHEL*WFYKGF
Trigger: AAAACCCTTATAAAACCATCAGAGCTCATGAGAACT...CTCTAAGGACTCTGCTGGTTGCTCTGGGCCCCCTGGATAGTCCAGGGCCATTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp AGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTAAGATCTCTGCCAGCTaGCTGGCTATTGTCATTCGC +
Preference number: 4 (lower is better)
Translates to: RETHMARAMIRGWFGWFTKISAS*LAIVIR
Trigger: GCGAATGACAATAGCCAGGCAGCTGGCAGAGATCTT...AGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TTCACTCAGGGCCATGTCGATGATGTTCAGAGCGTCATGGTAATGCTTCTGTGCACCACAGATGCACTCTaGAGACTGATGAGGCGGTCA +
Preference number: 4 (lower is better)
Translates to: FTQGHVDDVQSVMVMLLCTTDAL*RLMRRS
Trigger: TGACCGCCTCATCAGTCTGCAGAGTGCATCTGTGGT...GCACAGAAGCATTACCATGACGCTCTGAACATCATCGACATGGCCCTGAGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555239.5
CDS-3UTR GCA 90 bp CCTATTTCCACATCCTTCTCTCTGAATGCAAGTCACCAAGTCCAGCCCACACTCGTGGGCCCTCTGAAATaGAAGAAGCGCCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: PISTSFSLNASHQVQPTLVGPLK*KKRLSL
Trigger: CAGAGAAAGGCGCTTCTTGCATTTCAGAGGGCCCAC...GAGTGTGGGCTGGACTTGGTGACTTGCATTCAGAGAGAAGGATGTGGAAATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp AGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCTCGGCAGAGTGACTaGAACTTCACTTTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: SDDSGLVWLVHCGPLNTRPRQSD*NFTLEN
Trigger: GTTTTCCAAAGTGAAGTTGCAGTCACTCTGCCGAGG...ACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR GCA 90 bp GCAATGGTTCTATCTAAGAGGCTGCTCCCACGTCCAGAATCACTGGGGTTGGTGCCTCGGCAGAGTGACTaGAACTTCACTTTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: AMVLSKRLLPRPESLGLVPRQSD*NFTLEN
Trigger: GTTTTCCAAAGTGAAGTTGCAGTCACTCTGCCGAGG...CACCAACCCCAGTGATTCTGGACGTGGGAGCAGCCTCTTAGATAGAACCATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555239.5
CDS-3UTR GCA 90 bp GGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACCAGGATTTCCATATCTaGAGCATGTGCTTACAAGTC +
Preference number: 4 (lower is better)
Translates to: GESDDSGLVWLVHCGPLNQDFHI*SMCLQV
Trigger: GACTTGTAAGCACATGCTGCAGATATGGAAATCCTG...GTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp ACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCAGGATTTCCATATCTaGAGCATGTGCTTACAAGTC +
Preference number: 4 (lower is better)
Translates to: THMARAMIRGWFGWFTVAQDFHI*SMCLQV
Trigger: GACTTGTAAGCACATGCTGCAGATATGGAAATCCTG...GGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp AAAAACAAGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGACTTCCGACAGTGCCTaGTCCACTCTTGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: KNKRNAHGESDDSGLVWLTSDSA*STLEAA
Trigger: AGCAGCCTCAAGAGTGGAGCAGGCACTGTCGGAAGT...CAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCTTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR GCA 90 bp AAAAACAAGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGCCTTGCAGCTGCTCCTaGGCCTTCTTTCCTGATCTC +
Preference number: 4 (lower is better)
Translates to: KNKRNAHGESDDSGLVWLPCSCS*AFFPDL
Trigger: GAGATCAGGAAAGAAGGCGCAGGAGCAGCTGCAAGG...CAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCTTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCTGTCACTTCAAATTTaGTCTAATCATCTGCCAAGC +
Preference number: 4 (lower is better)
Translates to: SGLVWLVHCGPLNTRPWPLSLQI*SNHLPS
Trigger: GCTTGGCAGATGATTAGAGCAAATTTGAAGTGACAG...AGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp AACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCTCATGGGAGAATGCTaGAAGACAACAGGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: NAHGESDDSGLVWLVHCGLMGEC*KTTGQN
Trigger: ATTTTGGCCTGTTGTCTTGCAGCATTCTCCCATGAG...GCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTATAGCCTGATGAACTaGCATTCTGCCTATCCGAAT +
Preference number: 4 (lower is better)
Translates to: VGLVGSLWPTEHSSLASVYSLMN*HSAYPN
Trigger: ATTCGGATAGGCAGAATGGCAGTTCATCAGGCTATA...CACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp TCACCAGGAAACCCTATTGTCCTCAGGGGGTCAAGGGCCAAACAGCAGAAGATGATCCTTCTCTCTGAATaGAAGTCACCAAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: SPGNPIVLRGSRAKQQKMILLSE*KSPSPA
Trigger: GGCTGGACTTGGTGACTTGCATTCAGAGAGAAGGAT...CATCTTCTGCTGTTTGGCCCTTGACCCCCTGAGGACAATAGGGTTTCCTGGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CTTACAGAGGTGTCCCCGACCAGCCAATCTAAAGTAACCCTCCCCCTGTCACTTGACAGCATCTCATACTaGCCTCTTCTTCCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: LTEVSPTSQSKVTLPLSLDSISY*PLLPRA
Trigger: TGCTCTTGGAAGAAGAGGCCAGTATGAGATGCTGTC...AAGTGACAGGGGGAGGGTTACTTTAGATTGGCTGGTCGGGGACACCTCTGTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GGTGAGGTTGTAGCAGGATTTCCATATCTGCAGCATGTGCTTACAAGTCAGCAGGGATCTGTCTGGAGATaGCAAGCTGCAGAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: GEVVAGFPYLQHVLTSQQGSVWR*QAAEPG
Trigger: ACCTGGCTCTGCAGCTTGCCATCTCCAGACAGATCC...CTGCTGACTTGTAAGCACATGCTGCAGATATGGAAATCCTGCTACAACCTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555239.5
CDS-3UTR CCA 90 bp TCCGGGCCTCGGCAGAGTGACTGCAACTTCACTTTGGAAAACAGTAGTATGAAAATACCCCAGAGCCTCTaGGATCTGTCTGGAGATGGC +
Preference number: 4 (lower is better)
Translates to: SGPRQSDCNFTLENSSMKIPQSL*DLSGDG
Trigger: GCCATCTCCAGACAGATCCCAGAGGCTCTGGGGTAT...TTTCATACTACTGTTTTCCAAAGTGAAGTTGCAGTCACTCTGCCGAGGCCCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555239.5
CDS-3UTR CCA 90 bp TCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTGGGATCGCTGAAGTCTaGCAAAGTAATTGTATTAAG +
Preference number: 4 (lower is better)
Translates to: SGLVWLVHCGPLNTRPWPGIAEV*QSNCIK
Trigger: CTTAATACAATTACTTTGCCAGACTTCAGCGATCCC...AGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CCA 90 bp GGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGGGATCGCTGAAGTCTaGCAAAGTAATTGTATTAAG +
Preference number: 4 (lower is better)
Translates to: GVGLVGSLWPTEHSSLASGIAEV*QSNCIK
Trigger: CTTAATACAATTACTTTGCCAGACTTCAGCGATCCC...TGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CCA 90 bp AAACCAAAACCAGGGCTGTTGCTGCAAAAAGGAGGCCTGGGTGCTGAGGACGCATCTCTTTTTCTGTGTTaGCATCATTCTCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: KPKPGLLLQKGGLGAEDASLFLC*HHSQAG
Trigger: GCCTGCCTGAGAATGATGCCAACACAGAAAAAGAGA...TGCGTCCTCAGCACCCAGGCCTCCTTTTTGCAGCAACAGCCCTGGTTTTGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp TGGAGTAGGCAGGATGGACAGGGCAAGCAGACGCTAGGGGAGGGATGGGAGCAGAGATGGGAAACTGTATaGATTCCTATGATGGAAAAA +
Preference number: 4 (lower is better)
Translates to: WSRQDGQGKQTLGEGWEQRWETV*IPMMEK
Trigger: TTTTTCCATCATAGGAATCCATACAGTTTCCCATCT...CTGCTCCCATCCCTCCCCTAGCGTCTGCTTGCCCTGTCCATCCTGCCTACTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTGGAATTTCTCACAGTCCTaGAGGTTCAAAGAACAAAGC +
Preference number: 4 (lower is better)
Translates to: GLVGSLWPTEHSSLASVWNFSQS*RFKEQS
Trigger: GCTTTGTTCTTTGAACCTCCAGGACTGTGAGAAATT...CCACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GCCAAGCACACCCCTGAGAAACTGGAAAGGGCAAAGTTTGATGTCTTTCCTAGTCTGGGTACTGCTGAATaGCAGGCTAAGCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: AKHTPEKLERAKFDVFPSLGTAE*QAKLRL
Trigger: CAGCCTGAGCTTAGCCTGCCATTCAGCAGTACCCAG...ACTAGGAAAGACATCAAACTTTGCCCTTTCCAGTTTCTCAGGGGTGTGCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGTCATTCAAATGCACTaGATCCCCATATCCACCAGC +
Preference number: 4 (lower is better)
Translates to: ETHMARAMIRGWFGWFTVVIQMH*IPISTS
Trigger: GCTGGTGGATATGGGGATCCAGTGCATTTGAATGAC...CACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS-3UTR CCA 90 bp AGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTGCTACCGATGTGGCATaGACGGAGCTAACTGAAAAA +
Preference number: 4 (lower is better)
Translates to: SDDSGLVWLVHCGPLNTRATDVA*TELTEK
Trigger: TTTTTCAGTTAGCTCCGTCCATGCCACATCGGTAGC...ACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553972.5
CDS-3UTR TCA 90 bp ATTTTCTGGGTATTCACTCAGGGCCATGTCGATGATGTTCAGAGCGTCATGGTAGTAATGCTTCTGTGCTaGCAGCAGGAGGGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: IFWVFTQGHVDDVQSVMVVMLLC*QQEGKE
Trigger: CTCCTTGCCCTCCTGCTGTCAGCACAGAAGCATTAC...TACCATGACGCTCTGAACATCATCGACATGGCCCTGAGTGAATACCCAGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555239.5
CDS-3UTR TCA 90 bp GTTGTAGCAGGATTTCCATATCTGCAGCATGTGCTTACAAGTCAGCAGTGCCTCTCAGGGCCATGTCGATaGTGTTCAGAGCGTCATGGT +
Preference number: 4 (lower is better)
Translates to: VVAGFPYLQHVLTSQQCLSGPCR*CSERHG
Trigger: ACCATGACGCTCTGAACATCATCGACATGGCCCTGA...GAGGCACTGCTGACTTGTAAGCACATGCTGCAGATATGGAAATCCTGCTACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555239.5
CDS-3UTR TCA 90 bp GGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTGGGCACATGATCCATTTTaGACAATGTCAATAGGTTCA +
Preference number: 4 (lower is better)
Translates to: GLVGSLWPTEHSSLASVWAHDPF*TMSIGS
Trigger: TGAACCTATTGACATTGTTCAAAATGGATCATGTGC...CCACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR TCA 90 bp GATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCCCTTTCTCAGGTCTTTaGGCTTTTACGAATGACACA +
Preference number: 4 (lower is better)
Translates to: DDSGLVWLVHCGPLNTRPPFSGL*AFTNDT
Trigger: TGTGTCATTCGTAAAAGCTCAAAGACCTGAGAAAGG...GGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp CAACCAGCGTGGCTTCGGCCAGTTAACAGACCACTTCTTGGAGTCATGAGGATTTCTTCAAATTATAAGTaGGGAGATGGCCGGGCATGG +
Preference number: 4 (lower is better)
Translates to: QPAWLRPVNRPLLGVMRISSNYK*GDGRAW
Trigger: CCATGCCCGGCCATCTCCTCACTTATAATTTGAAGA...AATCCTCATGACTCCAAGAAGTGGTCTGTTAACTGGCCGAAGCCACGCTGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTGGTGGACATTTGGATTGTaGTCAGTTTTTGGCTATTAC +
Preference number: 4 (lower is better)
Translates to: GLVGSLWPTEHSSLASVWWTFGL*SVFGYY
Trigger: GTAATAGCCAAAAACTGATCACAATCCAAATGTCCA...CCACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp CATGTAGAGGACATTGTGGGACATTGGGAAGAGGTTGGCAGCTTCTTGGGTACAAAGGCACATCTAGGTTaGGCTGGATTTCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: HVEDIVGHWEEVGSFLGTKAHLG*AGFQRV
Trigger: CACCCTCTGAAATCCAGCTCAACCTAGATGTGCCTT...TGTACCCAAGAAGCTGCCAACCTCTTCCCAATGTCCCACAATGTCCTCTACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS-3UTR GCA 90 bp CCAGTGATGAAGCTCCCCAAGCTTCACTTGACTCTGAGGATCTTCTACGCCAGGGTAGGTTTTTGTGTTTaGTCCTTTGCGGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: PVMKLPKLHLTLRIFYARVGFCV*SFAERI
Trigger: GATCCTCTCCGCAAAGGAGCAAACACAAAAACCTAC...CCTGGCGTAGAAGATCCTCAGAGTCAAGTGAAGCTTGGGGAGCTTCATCACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp AGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTTTCTATCTAAGAGGCTaGTCCCACGTCCAGAATCAC +
Preference number: 4 (lower is better)
Translates to: RETHMARAMIRGWFGWFTFYLRG*SHVQNH
Trigger: GTGATTCTGGACGTGGGAGCAGCCTCTTAGATAGAA...AGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR GCA 90 bp AACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCATTTTGTATTCAACCTaGCTGAAAGCAGACTCCTGC +
Preference number: 4 (lower is better)
Translates to: NAHGESDDSGLVWLVHCGILYST*LKADSC
Trigger: GCAGGAGTCTGCTTTCAGGCAGGTTGAATACAAAAT...GCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CCTATTTCCACATCCTTCTCTCTGAATGCAAGTCACCAAGTCCAGCCCACACTCAGCCACCTGGTACAGTaGCCAAGACACAGTTTACAG +
Preference number: 4 (lower is better)
Translates to: PISTSFSLNASHQVQPTLSHLVQ*PRHSLQ
Trigger: CTGTAAACTGTGTCTTGGGCACTGTACCAGGTGGCT...GAGTGTGGGCTGGACTTGGTGACTTGCATTCAGAGAGAAGGATGTGGAAATAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CTTACAGAGGTGTCCCCGACCAGCCAATCTAAAGTAACCCTCCCCCTGTCACTTGATGAACTGCCATTCTaGCTATCCGAATTCTACCCT +
Preference number: 4 (lower is better)
Translates to: LTEVSPTSQSKVTLPLSLDELPF*LSEFYP
Trigger: AGGGTAGAATTCGGATAGGCAGAATGGCAGTTCATC...AAGTGACAGGGGGAGGGTTACTTTAGATTGGCTGGTCGGGGACACCTCTGTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGACCCTTTCTATCTCTTaGAGATACAGGAGTGCGATG +
Preference number: 4 (lower is better)
Translates to: ETHMARAMIRGWFGWFTVTLSIS*RYRSAM
Trigger: CATCGCACTCCTGTATCTCCAAGAGATAGAAAGGGT...CACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp AGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTCGTCTGTCAGCAATaGTTCTATCTAAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RETHMARAMIRGWFGWFTVVCQQ*FYLRGC
Trigger: GCAGCCTCTTAGATAGAACCATTGCTGACAGACGAC...AGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CCA 90 bp GATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCAAACAGAATATGAGGTaGGTGAGTGGGATTAAGGTG +
Preference number: 4 (lower is better)
Translates to: DDSGLVWLVHCGPLNTRPKQNMR*VSGIKV
Trigger: CACCTTAATCCCACTCACCCACCTCATATTCTGTTT...GGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CAACCAGCGTGGCTTCGGCCAGTTAACAGACCACTTCTTGGAGTCATGAGGATTATTCTTCCTGTTTCCTaGCCATCATCGCCATCCTTC +
Preference number: 4 (lower is better)
Translates to: QPAWLRPVNRPLLGVMRIILPVS*PSSPSF
Trigger: GAAGGATGGCGATGATGGCCAGGAAACAGGAAGAAT...AATCCTCATGACTCCAAGAAGTGGTCTGTTAACTGGCCGAAGCCACGCTGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CCAGGGTGGGCACCTTCTTGTCACTCAATGTCACTGTCTTACAGAGGTGTCCCCTGTGCGTTGTTTTATTaGGTGCAGTGTATACTGCTC +
Preference number: 4 (lower is better)
Translates to: PGWAPSCHSMSLSYRGVPCALFY*VQCILL
Trigger: GAGCAGTATACACTGCACCCAATAAAACAACGCACA...GGGGACACCTCTGTAAGACAGTGACATTGAGTGACAAGAAGGTGCCCACCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp TCACCAGGAAACCCTATTGTCCTCAGGGGGTCAAGGGCCAAACAGCAGAAGATGTTAAATATCTATACTTaGCTGGGCGCTGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: SPGNPIVLRGSRAKQQKMLNIYT*LGAVAH
Trigger: GTGAGCCACAGCGCCCAGCCAAGTATAGATATTTAA...CATCTTCTGCTGTTTGGCCCTTGACCCCCTGAGGACAATAGGGTTTCCTGGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CCTATTTCCACATCCTTCTCTCTGAATGCAAGTCACCAAGTCCAGCCCACACTCGAGTCTGGGTTTCAGTaGCTACAGACAACCCTCCAA +
Preference number: 4 (lower is better)
Translates to: PISTSFSLNASHQVQPTLESGFQ*LQTTLQ
Trigger: TTGGAGGGTTGTCTGTAGCCACTGAAACCCAGACTC...GAGTGTGGGCTGGACTTGGTGACTTGCATTCAGAGAGAAGGATGTGGAAATAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CAA 72 bp TCCGGATCTTGCTGTCTACTCTGTGGGATTCGGACTTaGGCTCAAACACCTCTACACCTTCTTCTCATGGTG +
Preference number: 4 (lower is better)
Translates to: SGSCCLLCGIRT*AQTPLHLLLMV
Trigger: CACCATGAGAAGAAGGTGTAGAGGTGTTTGAGCCAAAGTCCGAATCCCACAGAGTAGACAGCAAGATCCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGGCACATGATCCATTTTaGACAATGTCAATAGGTTCA +
Preference number: 4 (lower is better)
Translates to: DSGLVWLVHCGPLNTRPWAHDPF*TMSIGS
Trigger: TGAACCTATTGACATTGTTCAAAATGGATCATGTGC...CCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR TCA 90 bp AAAAACAAGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGAGCACATTCCTGTCTaGAATGGTGCAGGATGTCCT +
Preference number: 4 (lower is better)
Translates to: KNKRNAHGESDDSGLVWLEHIPV*NGAGCP
Trigger: AGGACATCCTGCACCATTTCAGACAGGAATGTGCTC...CAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCTTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGTTTTACACACCCTCTaGATCTTTACAACCACCTTG +
Preference number: 4 (lower is better)
Translates to: ETHMARAMIRGWFGWFTVVLHTL*IFTTTL
Trigger: CAAGGTGGTTGTAAAGATTCAGAGGGTGTGTAAAAC...CACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp TCACCAGGAAACCCTATTGTCCTCAGGGGGTCAAGGGCCAAACAGCAGAAGATGTTTTTGTCATTCTTTTaGGGCAGGGTCTTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SPGNPIVLRGSRAKQQKMFLSFF*GRVLLC
Trigger: ACACAGCAAGACCCTGCCTCAAAAGAATGACAAAAA...CATCTTCTGCTGTTTGGCCCTTGACCCCCTGAGGACAATAGGGTTTCCTGGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp TTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTTCTGATGTTTTCTCATaGTTACACTGGAGTTATGGG +
Preference number: 4 (lower is better)
Translates to: LVWLVHCGPLNTRPWPQCSDVFS*LHWSYG
Trigger: CCCATAACTCCAGTGTAATCATGAGAAAACATCAGA...ACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp AGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTAGGTTTTTGTGTTTaGTCCTTTGCGGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: RETHMARAMIRGWFGWFTVGFCV*SFAERI
Trigger: GATCCTCTCCGCAAAGGAGCAAACACAAAAACCTAC...AGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000555005.5
CDS-3UTR GCA 90 bp GGGCCTCGGCAGAGTGACTGCAACTTCACTTTGGAAAACAGTAGTATGAAATTTTGTGTTCAGGTATCCTaGTCAGCACAGCGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: GPRQSDCNFTLENSSMKFCVQVS*SAQRPG
Trigger: ACCGGGACGCTGTGCTGAGCAGGATACCTGAACACA...AAATTTCATACTACTGTTTTCCAAAGTGAAGTTGCAGTCACTCTGCCGAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555239.5
CDS-3UTR GCA 90 bp GATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCAGTTTATGGTAATTTaGTGCAACCACAGGCAATTA +
Preference number: 4 (lower is better)
Translates to: DSGLVWLVHCGPLNTRPWQFMVI*CNHRQL
Trigger: TAATTGCCTGTGGTTGCAGCAAATTACCATAAACTG...CCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CTTACAGAGGTGTCCCCGACCAGCCAATCTAAAGTAACCCTCCCCCTGTCACTTTTGTACATTACAGGATaGTCTTCCCTCTTCACATGG +
Preference number: 4 (lower is better)
Translates to: LTEVSPTSQSKVTLPLSLLYITG*SSLFTW
Trigger: CCATGTGAAGAGGGAAGAGCATCCTGTAATGTACAA...AAGTGACAGGGGGAGGGTTACTTTAGATTGGCTGGTCGGGGACACCTCTGTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp AGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTATACTCATGGGAGAATaGTGCAAGACAACAGGCCAA +
Preference number: 4 (lower is better)
Translates to: RNAHGESDDSGLVWLVHCILMGE*CKTTGQ
Trigger: TTGGCCTGTTGTCTTGCAGCATTCTCCCATGAGTAT...ACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGCTTATAATACGAATGTaGCTGATATGGTTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: VGLVGSLWPTEHSSLASVLIIRM*LIWFGC
Trigger: ACAGCCAAACCATATCAGGCACATTCGTATTATAAG...CACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp TTCACTCAGGGCCATGTCGATGATGTTCAGAGCGTCATGGTAATGCTTCTGTGCGACAGCATCTCATACTaGCCTCTTCTTCCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: FTQGHVDDVQSVMVMLLCDSISY*PLLPRA
Trigger: TGCTCTTGGAAGAAGAGGCCAGTATGAGATGCTGTC...GCACAGAAGCATTACCATGACGCTCTGAACATCATCGACATGGCCCTGAGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555239.5
CDS-3UTR CCA 90 bp GGGCCTCGGCAGAGTGACTGCAACTTCACTTTGGAAAACAGTAGTATGAAATTTCCTCTGGGATCTGTCTaGAGATGGCAAGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GPRQSDCNFTLENSSMKFPLGSV*RWQAAE
Trigger: CTCTGCAGCTTGCCATCTCCAGACAGATCCCAGAGG...AAATTTCATACTACTGTTTTCCAAAGTGAAGTTGCAGTCACTCTGCCGAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555239.5
CDS-3UTR CCA 90 bp AACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCGGGATCGCTGAAGTCTaGCAAAGTAATTGTATTAAG +
Preference number: 4 (lower is better)
Translates to: NAHGESDDSGLVWLVHCGGIAEV*QSNCIK
Trigger: CTTAATACAATTACTTTGCCAGACTTCAGCGATCCC...GCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CCA 90 bp AGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTTCATCTGGTACAAAGTaGCAGAACCTGACGCTTTTG +
Preference number: 4 (lower is better)
Translates to: RETHMARAMIRGWFGWFTSSGTK*QNLTLL
Trigger: CAAAAGCGTCAGGTTCTGCCACTTTGTACCAGATGA...AGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACAAGCCACTATATTTGTaGCAATTTGTTGTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: HMARAMIRGWFGWFTVAHKPLYL*QFVVAA
Trigger: TGCTGCTACAACAAATTGCCACAAATATAGTGGCTT...GTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp TCACCAGGAAACCCTATTGTCCTCAGGGGGTCAAGGGCCAAACAGCAGAAGATGAACTCAGTGAGCCCATaGAAAATGCACAAACTAAGC +
Preference number: 4 (lower is better)
Translates to: SPGNPIVLRGSRAKQQKMNSVSP*KMHKLS
Trigger: GCTTAGTTTGTGCATTTTCCATGGGCTCACTGAGTT...CATCTTCTGCTGTTTGGCCCTTGACCCCCTGAGGACAATAGGGTTTCCTGGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTTACCCATACAAACCATaGAAACAGGAATGGGTGACA +
Preference number: 4 (lower is better)
Translates to: ESDDSGLVWLVHCGPLNTYPYKP*KQEWVT
Trigger: TGTCACCCATTCCTGTTTCCATGGTTTGTATGGGTA...AGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CAA 72 bp TTGACTCTGAGGATCTTCTACGCCAGGCACTTCACATaGATGTTTCACTTAACCCCACCCCTGTTACTGTCC +
Preference number: 4 (lower is better)
Translates to: LTLRIFYARHFT*MFHLTPPLLLS
Trigger: GGACAGTAACAGGGGTGGGGTTAAGTGAAACATCAATGTGAAGTGCCTGGCGTAGAAGATCCTCAGAGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp CAACCAGCGTGGCTTCGGCCAGTTAACAGACCACTTCTTGGAGTCATGAGGATTCTGAAAACACTGGACTaGAAAGTCTCATTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: QPAWLRPVNRPLLGVMRILKTLD*KVSLCL
Trigger: CAGACACAATGAGACTTTTCAGTCCAGTGTTTTCAG...AATCCTCATGACTCCAAGAAGTGGTCTGTTAACTGGCCGAAGCCACGCTGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp AACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCGTCATGAGGATTAGATaGGTTAATACATGTCGAATG +
Preference number: 4 (lower is better)
Translates to: NAHGESDDSGLVWLVHCGVMRIR*VNTCRM
Trigger: CATTCGACATGTATTAACTCATCTAATCCTCATGAC...GCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp AAACCAAAACCAGGGCTGTTGCTGCAAAAAGGAGGCCTGGGTGCTGAGGACGCATTGGCATATGTTGTATaGATAAGAGCTTCCGTATGT +
Preference number: 4 (lower is better)
Translates to: KPKPGLLLQKGGLGAEDALAYVV*IRASVC
Trigger: ACATACGGAAGCTCTTATTCATACAACATATGCCAA...TGCGTCCTCAGCACCCAGGCCTCCTTTTTGCAGCAACAGCCCTGGTTTTGGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CCAGTGATGAAGCTCCCCAAGCTTCACTTGACTCTGAGGATCTTCTACGCCAGGTGTAGTTTTAAAAACTaGTACATAGGCCAGGCACAC +
Preference number: 4 (lower is better)
Translates to: PVMKLPKLHLTLRIFYARCSFKN*YIGQAH
Trigger: GTGTGCCTGGCCTATGTAGCAGTTTTTAAAACTACA...CCTGGCGTAGAAGATCCTCAGAGTCAAGTGAAGCTTGGGGAGCTTCATCACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp CCTCTAGGCTTCAGGGCACCTAAGTTCAGAGCTCAGCCCTCCATATTTCCCTGTGTAAGACAGGAAATGTaGGTTGTTTTATTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: PLGFRAPKFRAQPSIFPCVRQEM*VVLLGA
Trigger: TGCACCCAATAAAACAACGCACATTTCCTGTCTTAC...ACAGGGAAATATGGAGGGCTGAGCTCTGAACTTAGGTGCCCTGAAGCCTAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp GAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGAAAACCATGAAAGTATaGTTCTGGAGAGTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: ETHMARAMIRGWFGWFTVKTMKV*FWRVAC
Trigger: ACAGGCAACTCTCCAGAAGCATACTTTCATGGTTTT...CACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553972.5
CDS-3UTR CCA 90 bp GCCAAGCACACCCCTGAGAAACTGGAAAGGGCAAAGTTTGATGTCTTTCCTAGTGAACTTCAATATGAGTaGTGTCCCCTCACTGGGCAA +
Preference number: 4 (lower is better)
Translates to: AKHTPEKLERAKFDVFPSELQYE*CPLTGQ
Trigger: TTGCCCAGTGAGGGGACACCACTCATATTGAAGTTC...ACTAGGAAAGACATCAAACTTTGCCCTTTCCAGTTTCTCAGGGGTGTGCTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CCAGGGTGGGCACCTTCTTGTCACTCAATGTCACTGTCTTACAGAGGTGTCCCCTCAATAATTGTGAGCTaGCATTACCCATTCCATTGT +
Preference number: 4 (lower is better)
Translates to: PGWAPSCHSMSLSYRGVPSIIVS*HYPFHC
Trigger: ACAATGGAATGGGTAATGCCAGCTCACAATTATTGA...GGGGACACCTCTGTAAGACAGTGACATTGAGTGACAAGAAGGTGCCCACCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp AAACCAAAACCAGGGCTGTTGCTGCAAAAAGGAGGCCTGGGTGCTGAGGACGCATCCATAGGCATTTATTaGTTGACAAGGTTGGCATAT +
Preference number: 4 (lower is better)
Translates to: KPKPGLLLQKGGLGAEDASIGIY*LTRLAY
Trigger: ATATGCCAACCTTGTCAACCAATAAATGCCTATGGA...TGCGTCCTCAGCACCCAGGCCTCCTTTTTGCAGCAACAGCCCTGGTTTTGGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp GTTGTAGCAGGATTTCCATATCTGCAGCATGTGCTTACAAGTCAGCAGTGCCTCTTCCAAGAGCAATGGTaGGTAAGTCATAGACCACAG +
Preference number: 4 (lower is better)
Translates to: VVAGFPYLQHVLTSQQCLFQEQW*VSHRPQ
Trigger: CTGTGGTCTATGACTTACTCACCATTGCTCTTGGAA...GAGGCACTGCTGACTTGTAAGCACATGCTGCAGATATGGAAATCCTGCTACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555239.5
CDS-3UTR TCA 90 bp ATGGACGGAGCCTCTTTTCTATTATGGACTGCTTTTAGGCCAGAAATAAAGGCAACATGGCGAGAGCGATaGTTCGGGGTTGGTTTGGTT +
Preference number: 4 (lower is better)
Translates to: MDGASFLLWTAFRPEIKATWRER*FGVGLV
Trigger: AACCAAACCAACCCCGAATCATCGCTCTCGCCATGT...TGCCTTTATTTCTGGCCTAAAAGCAGTCCATAATAGAAAAGAGGCTCCGTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS-3UTR GCA 90 bp ACGTCCAGAATCACTGGGGTTGGTGAGGTTGTAGCAGGATTTCCATATCTGCAGCAGGATTTCCATATCTaGAGCATGTGCTTACAAGTC +
Preference number: 4 (lower is better)
Translates to: TSRITGVGEVVAGFPYLQQDFHI*SMCLQV
Trigger: GACTTGTAAGCACATGCTGCAGATATGGAAATCCTG...CTGCAGATATGGAAATCCTGCTACAACCTCACCAACCCCAGTGATTCTGGACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555239.5
CDS-3UTR GCA 90 bp GTTGGTGAGGTTGTAGCAGGATTTCCATATCTGCAGCATGTGCTTACAAGTCAGTTCTATCTAAGAGGCTaGTCCCACGTCCAGAATCAC +
Preference number: 4 (lower is better)
Translates to: VGEVVAGFPYLQHVLTSQFYLRG*SHVQNH
Trigger: GTGATTCTGGACGTGGGAGCAGCCTCTTAGATAGAA...CTGACTTGTAAGCACATGCTGCAGATATGGAAATCCTGCTACAACCTCACCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555239.5
CDS-3UTR GCA 90 bp TCACCAGGAAACCCTATTGTCCTCAGGGGGTCAAGGGCCAAACAGCAGAAGATGCTTGGAGTTTTGACTTaGATTTCCCTAGTGAGTAAT +
Preference number: 4 (lower is better)
Translates to: SPGNPIVLRGSRAKQQKMLGVLT*ISLVSN
Trigger: ATTACTCACTAGGGAAATGCAAGTCAAAACTCCAAG...CATCTTCTGCTGTTTGGCCCTTGACCCCCTGAGGACAATAGGGTTTCCTGGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GCCAAGCACACCCCTGAGAAACTGGAAAGGGCAAAGTTTGATGTCTTTCCTAGTTGTTCCCGGTCCACATaGAGATTACTGGTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: AKHTPEKLERAKFDVFPSCSRST*RLLVEE
Trigger: TTCTTCTACCAGTAATCTCCATGTGGACCGGGAACA...ACTAGGAAAGACATCAAACTTTGCCCTTTCCAGTTTCTCAGGGGTGTGCTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp CTTACAGAGGTGTCCCCGACCAGCCAATCTAAAGTAACCCTCCCCCTGTCACTTTCTTCATGTGCTTGTTaGCCTAGACCTTACTTTAAA +
Preference number: 4 (lower is better)
Translates to: LTEVSPTSQSKVTLPLSLSSCAC*PRPYFK
Trigger: TTTAAAGTAAGGTCTAGGCCAACAAGCACATGAAGA...AAGTGACAGGGGGAGGGTTACTTTAGATTGGCTGGTCGGGGACACCTCTGTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp ATGGACGGAGCCTCTTTTCTATTATGGACTGCTTTTAGGCCAGAAATAAAGGCAGCAATCCATGAACACTaGTTTCCTGTCTCGGGATCG +
Preference number: 4 (lower is better)
Translates to: MDGASFLLWTAFRPEIKAAIHEH*FPVSGS
Trigger: CGATCCCGAGACAGGAAATCAGTGTTCATGGATTGC...TGCCTTTATTTCTGGCCTAAAAGCAGTCCATAATAGAAAAGAGGCTCCGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS-3UTR GCA 90 bp AAAAACAAGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGCAGGATTTCCATATCTaGAGCATGTGCTTACAAGTC +
Preference number: 4 (lower is better)
Translates to: KNKRNAHGESDDSGLVWLQDFHI*SMCLQV
Trigger: GACTTGTAAGCACATGCTGCAGATATGGAAATCCTG...CAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCTTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR CCA 90 bp CAACCAGCGTGGCTTCGGCCAGTTAACAGACCACTTCTTGGAGTCATGAGGATTGAAAGTTCATCGGTTTaGGTTTGTCTGATGTTTTCT +
Preference number: 4 (lower is better)
Translates to: QPAWLRPVNRPLLGVMRIESSSV*VCLMFS
Trigger: AGAAAACATCAGACAAACCCAAACCGATGAACTTTC...AATCCTCATGACTCCAAGAAGTGGTCTGTTAACTGGCCGAAGCCACGCTGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CAA 72 bp CCATTTGATGAGGGATCTTCAGATGGGGAGAGTGTCTaGGATTATCCAGGTAAGACCAATGTAATCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PFDEGSSDGESV*DYPGKTNVIRR
Trigger: CCTCCTGATTACATTGGTCTTACCTGGATAATCCAAGACACTCTCCCCATCTGAAGATCCCTCATCAAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR GCA 90 bp AGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGCTGCTATAAACATTTaGGGAGAAGTCTTTGTATTT +
Preference number: 4 (lower is better)
Translates to: RETHMARAMIRGWFGWFTAAINI*GEVFVF
Trigger: AAATACAAAGACTTCTCCGCAAATGTTTATAGCAGC...AGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR TCA 90 bp AAAAACAAGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGCACATGATCCATTTTaGACAATGTCAATAGGTTCA +
Preference number: 4 (lower is better)
Translates to: KNKRNAHGESDDSGLVWLAHDPF*TMSIGS
Trigger: TGAACCTATTGACATTGTTCAAAATGGATCATGTGC...CAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCTTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR TCA 90 bp ATGGACGGAGCCTCTTTTCTATTATGGACTGCTTTTAGGCCAGAAATAAAGGCACCCAAATGCAATCCATaGACACTGATTTCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: MDGASFLLWTAFRPEIKAPKCNP*TLISCL
Trigger: GAGACAGGAAATCAGTGTTCATGGATTGCATTTGGG...TGCCTTTATTTCTGGCCTAAAAGCAGTCCATAATAGAAAAGAGGCTCCGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS-3UTR GCA 90 bp CCTATTTCCACATCCTTCTCTCTGAATGCAAGTCACCAAGTCCAGCCCACACTCTTGGTGCATAATAAATaGTCAATAATTGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PISTSFSLNASHQVQPTLLVHNK*SIIVSW
Trigger: CCAGCTCACAATTATTGAGCATTTATTATGCACCAA...GAGTGTGGGCTGGACTTGGTGACTTGCATTCAGAGAGAAGGATGTGGAAATAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CAA 72 bp GTTTTCTATAAATGGAATCACACAGCACGTTCTTTTTaGACTGGCTCCTTCAACTCGTCACCACTACCTGGA +
Preference number: 4 (lower is better)
Translates to: VFYKWNHTARSF*TGSFNSSPLPG
Trigger: TCCAGGTAGTGGTGACGAGTTGAAGGAGCCAGTCAAAAAAGAACGTGCTGTGTGATTCCATTTATAGAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CCA 90 bp GCCAAGCACACCCCTGAGAAACTGGAAAGGGCAAAGTTTGATGTCTTTCCTAGTAAAAATCTATACTCATaGGAGAATGCTGCAAGACAA +
Preference number: 4 (lower is better)
Translates to: AKHTPEKLERAKFDVFPSKNLYS*ENAARQ
Trigger: TTGTCTTGCAGCATTCTCCCATGAGTATAGATTTTT...ACTAGGAAAGACATCAAACTTTGCCCTTTCCAGTTTCTCAGGGGTGTGCTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CAA 72 bp CATCCTAGTGGGTGTAAGGTGGTATCTCTTGGAGTTTaGACTTGCATTTCCCTAGTGAGTAATGATGTTGAA +
Preference number: 4 (lower is better)
Translates to: HPSGCKVVSLGV*TCISLVSNDVE
Trigger: TTCAACATCATTACTCACTAGGGAAATGCAAGTCAAAACTCCAAGAGATACCACCTTACACCCACTAGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
3UTR CAA 72 bp CCACGTCCTCACAAACATTTGTTATTGTCTGTCTTTTaGATTATAGACATCCTAGTGGGTGTAAGGTGGTAT +
Preference number: 4 (lower is better)
Translates to: PRPHKHLLLSVF*IIDILVGVRWY
Trigger: ATACCACCTTACACCCACTAGGATGTCTATAATCAAAAAGACAGACAATAACAAATGTTTGTGAGGACGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp TGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGCCCAGGGCTCCCTGGCTaGGGGGTACCCAGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: WPQCGRFIPLGRWHKPWCPGLPG*GVPRPL
Trigger: CAGAGGCCTGGGTACCCCCAAGCCAGGGAGCCCTGG...GCACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp GCAGGCAGAGAGTCTGGGCCCGCAATGATGACTGTGTGGCCGCCGGGGAGATGCGGCAGATTCATCCCCTaGGGGCGATGGCACAAGCCC +
Preference number: 5 (lower is better)
Translates to: AGRESGPAMMTVWPPGRCGRFIP*GRWHKP
Trigger: GGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCC...GCATCTCCCCGGCGGCCACACAGTCATCATTGCGGGCCCAGACTCTCTGCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp CATCCAGGGGTGCAGCGGGCCCTGCTTAGGGGCACTGCTCTGCAGAGACGAAGCGTGCCTGCTCCACTCTaGAGGCTGCTACCGATGTGG +
Preference number: 5 (lower is better)
Translates to: HPGVQRALLRGTALQRRSVPAPL*RLLPMW
Trigger: CCACATCGGTAGCAGCCTCAAGAGTGGAGCAGGCAC...GCTTCGTCTCTGCAGAGCAGTGCCCCTAAGCAGGGCCCGCTGCACCCCTGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS CCA 90 bp GGCTTCTGCGATCACCCGCAGCCTGTAGGGCGGGACAGCTGTCAGTaGCAGATCGTCCAGGCCCACCCGGGCGTAAATGTTCAGAGCTTC +
Preference number: 5 (lower is better)
Translates to: GFCDHPQPVGRDSCQ*QIVQAHPGVNVQSF
Trigger: GAAGCTCTGAACATTTACGCCCGGGTGGGCCTGGACGATCTGCCACTGACAGCTGTCCCGCCCTACAGGCTGCGGGTGATCGCAGAAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553948.1
ENST00000557766.1
CDS-3UTR CAA 90 bp TGGAGTAGGCAGGATGGACAGGGCAAGCAGACGCTAGGGGAGGGATGGGAGCAGAGGCGGGAGGGCTGCTaGAGTCCAGGAGTTCAGGAC +
Preference number: 5 (lower is better)
Translates to: WSRQDGQGKQTLGEGWEQRREGC*SPGVQD
Trigger: GTCCTGAACTCCTGGACTCAAGCAGCCCTCCCGCCT...CTGCTCCCATCCCTCCCCTAGCGTCTGCTTGCCCTGTCCATCCTGCCTACTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp GAACACTCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACGGGGTCTCCAGGCATaGAGAGAGCCCACCCACCTC +
Preference number: 5 (lower is better)
Translates to: EHSSLASVWQIHPLGAMARGLQA*REPTHL
Trigger: GAGGTGGGTGGGCTCTCTCAATGCCTGGAGACCCCG...TGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGAGTGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp GCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACCACAACCCGAGCCCTaGGGCCACAGGCACCGCCTC +
Preference number: 5 (lower is better)
Translates to: AHGESDDSGLVWLVHCGPPQPEP*GHRHRL
Trigger: GAGGCGGTGCCTGTGGCCCAAGGGCTCGGGTTGTGG...TGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS GCA 90 bp AGAAGCTCTGCCATGTCATCGTTGGCGATGAGCTTGGCCGACAGCTaGTTGACGAGCTCAGGGATCCGCTCCCACTGGCACTCGGAGCGG +
Preference number: 5 (lower is better)
Translates to: RSSAMSSLAMSLADS*LTSSGIRSHWHSER
Trigger: CCGCTCCGAGTGCCAGTGGGAGCGGATCCCTGAGCTCGTCAAGCAGCTGTCGGCCAAGCTCATCGCCAACGATGACATGGCAGAGCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000553948.1
CDS-3UTR CAA 90 bp GAACACTCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCAGGCAGATTCATCCCCTaGGGGCGATGGCACAAGCCC +
Preference number: 5 (lower is better)
Translates to: EHSSLASVWQIHPLGAMAGRFIP*GRWHKP
Trigger: GGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCC...TGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGAGTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR CAA 90 bp CAAAACTGCATCCCCAGCATGGCTCTGGTCAAGGTCACTGCCAACCTGCACACCCCTGCACCATCTGCCTaGGTGGCCCAGCCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: QNCIPSMALVKVTANLHTPAPSA*VAQPPP
Trigger: GGGAGGAGGCTGGGCCACCAAGGCAGATGGTGCAGG...GGTGTGCAGGTTGGCAGTGACCTTGACCAGAGCCATGCTGGGGATGCAGTTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp TCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCGGAGATTCACCCATGTaGCTGCAGGCACCAAGCCCC +
Preference number: 5 (lower is better)
Translates to: SSLASVWQIHPLGAMAQAGDSPM*LQAPSP
Trigger: GGGGCTTGGTGCCTGCAGCAACATGGGTGAATCTCC...GGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp GGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGGGCAGATTCATCCCCTaGGGGCGATGGCACAAGCCC +
Preference number: 5 (lower is better)
Translates to: GLVWLVHCGPLNTRPWPQGRFIP*GRWHKP
Trigger: GGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCC...CTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CAA 90 bp ATGATGACTGTGTGGCCGCCGGGGAGATGCGTGGGGCCATCTGGAGGAGTCTGGCTGGAGGAGTCTGGGTaGCTCCATGTGATCACAGAC +
Preference number: 5 (lower is better)
Translates to: MMTVWPPGRCVGPSGGVWLEESG*LHVITD
Trigger: GTCTGTGATCACATGGAGCAACCCAGACTCCTCCAG...CCAGACTCCTCCAGATGGCCCCACGCATCTCCCCGGCGGCCACACAGTCATCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp TCACCAGGAAACCCTATTGTCCTCAGGGGGTCAAGGGCCAAACAGCAGAAGATGGACCCTCCTCAGGCCTaGGCTGGACCCAGGGCCCGA +
Preference number: 5 (lower is better)
Translates to: SPGNPIVLRGSRAKQQKMDPPQA*AGPRAR
Trigger: TCGGGCCCTGGGTCCAGCCAAGGCCTGAGGAGGGTC...CATCTTCTGCTGTTTGGCCCTTGACCCCCTGAGGACAATAGGGTTTCCTGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp GCAATGGCCCTGGACTATCCAGGGGGCCCAGAGCAACCAGCAGAGTCCTTAGAGTCTGGCAAGGTGAGCTaGTCAGGGAGAGGCCGTAGC +
Preference number: 5 (lower is better)
Translates to: AMALDYPGGPEQPAESLESGKVS*SGRGRS
Trigger: GCTACGGCCTCTCCCTGACAAGCTCACCTTGCCAGA...CTCTAAGGACTCTGCTGGTTGCTCTGGGCCCCCTGGATAGTCCAGGGCCATTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp GCAGGCAGAGAGTCTGGGCCCGCAATGATGACTGTGTGGCCGCCGGGGAGATGCAGGCGGGTGGATCACTaGGAAGGATGTCTTGATCCA +
Preference number: 5 (lower is better)
Translates to: AGRESGPAMMTVWPPGRCRRVDH*EGCLDP
Trigger: TGGATCAAGACATCCTTCCAAGTGATCCACCCGCCT...GCATCTCCCCGGCGGCCACACAGTCATCATTGCGGGCCCAGACTCTCTGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS TCA 90 bp CTGGAGAGTTGCAGAGAGAGGGTTCCCGGCGGGGACCTGCGTCACTaGATGAATGAGCTGCAGGGGGCCACACAAAGGTATCGGGTTTGG +
Preference number: 5 (lower is better)
Translates to: LESCRERVPGGDLRH*MNELQGATQRYRVW
Trigger: CCAAACCCGATACCTTTGTGTGGCCCCCTGCAGCTCATTCATTCAGTGACGCAGGTCCCCGCCGGGAACCCTCTCTCTGCAACTCTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557292.1
CDS-3UTR CAA 90 bp GGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTGGTCGTTGGCGATGAGCTaGGCCGACAGCTGCTTGACG +
Preference number: 5 (lower is better)
Translates to: GLVGSLWPTEHSSLASVWSLAMS*ADSCLT
Trigger: CGTCAAGCAGCTGTCGGCCAAGCTCATCGCCAACGA...CCACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp AACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCGCGGCGGTCAGATGCTaGCGGACCTCAGTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: NAHGESDDSGLVWLVHCGAAVRC*RTSVSW
Trigger: CCAGCTGACTGAGGTCCGCAAGCATCTGACCGCCGC...GCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp CACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACGGCAGATTCATCCCCTaGGGGCGATGGCACAAGCCC +
Preference number: 5 (lower is better)
Translates to: HMARAMIRGWFGWFTVAHGRFIP*GRWHKP
Trigger: GGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCC...GTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CAA 90 bp AAACCAAAACCAGGGCTGTTGCTGCAAAAAGGAGGCCTGGGTGCTGAGGACGCATGCTCTCCGCCTCCCTaGCAGCTGCTCCTGCGCCTT +
Preference number: 5 (lower is better)
Translates to: KPKPGLLLQKGGLGAEDACSPPP*QLLLRL
Trigger: AAGGCGCAGGAGCAGCTGCAAGGGAGGCGGAGAGCA...TGCGTCCTCAGCACCCAGGCCTCCTTTTTGCAGCAACAGCCCTGGTTTTGGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp ACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCTGTCCTGAGATCCTCTaGGCTGAGTGGGGCGGCTCC +
Preference number: 5 (lower is better)
Translates to: THMARAMIRGWFGWFTVACPEIL*AEWGGS
Trigger: GGAGCCGCCCCACTCAGCCAAGAGGATCTCAGGACA...GGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp CTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGCAGAACCTGACGCTTTaGGGCTTCTGCTCACCATCC +
Preference number: 5 (lower is better)
Translates to: LASVWQIHPLGAMAQALVQNLTL*GFCSPS
Trigger: GGATGGTGAGCAGAAGCCCAAAAGCGTCAGGTTCTG...CACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS TCA 90 bp AGAGTTGCAGAGAGAGGGTTCCCGGCGGGGACCTGCGTCACTGAATaGATGAGCTGCAGGGGGCCACACAAAGGTATCGGGTTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: RVAERGFPAGTCVTE*MSCRGPHKGIGFGR
Trigger: TCTCCCAAACCCGATACCTTTGTGTGGCCCCCTGCAGCTCATTCATTCAGTGACGCAGGTCCCCGCCGGGAACCCTCTCTCTGCAACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557292.1
CDS GCA 90 bp TTCAGCCTCCTCAGTCCCTACGCAGCTCCGCACATCCAATCAACATaGTCCAACGGGTTTCAGCCCCCTTCAAGCCCCAGGCTCCCAATC +
Preference number: 5 (lower is better)
Translates to: FSLLSPYAAPHIQST*SNGFQPPSSPRLPI
Trigger: GATTGGGAGCCTGGGGCTTGAAGGGGGCTGAAACCCGTTGGAGCATGTTGATTGGATGTGCGGAGCTGCGTAGGGACTGAGGAGGCTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556960.1
CDS GCA 90 bp TTAGGGGCACTGCTCTGCAGAGACGAAGCCACTTCCGACAGTGCCTaGTCCACTCTTGAGGCTGCTACCGATGTGGCATGGACGGAGCTA +
Preference number: 5 (lower is better)
Translates to: LGALLCRDEATSDSA*STLEAATDVAWTEL
Trigger: TAGCTCCGTCCATGCCACATCGGTAGCAGCCTCAAGAGTGGAGCAGGCACTGTCGGAAGTGGCTTCGTCTCTGCAGAGCAGTGCCCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553972.5
ENST00000554654.5
ENST00000557292.1
CDS-3UTR CAA 90 bp CATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGGTGCCTGCTCCACTCTaGAGGCTGCTACCGATGTGG +
Preference number: 5 (lower is better)
Translates to: HGESDDSGLVWLVHCGPLVPAPL*RLLPMW
Trigger: CCACATCGGTAGCAGCCTCAAGAGTGGAGCAGGCAC...CAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CAA 90 bp CTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCCTGGTGGGACATTGTGGGACATaGGGAAGAGGTTGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: LASVWQIHPLGAMAQALVGHCGT*GRGWQL
Trigger: AAGCTGCCAACCTCTTCCCAATGTCCCACAATGTCC...CACCAGGGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR CAA 90 bp AGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTCTGATCCAGTGGGCCTaGCCCCACGCTCCCGCATGG +
Preference number: 5 (lower is better)
Translates to: RETHMARAMIRGWFGWFTLIQWA*PHAPAW
Trigger: CCATGCGGGAGCGTGGGGCAAGGCCCACTGGATCAG...AGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp GGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGCCCATGTGTCCATCCTaGAGCCATGTGGGTGGAGAG +
Preference number: 5 (lower is better)
Translates to: GLVWLVHCGPLNTRPWPQPMCPS*SHVGGE
Trigger: CTCTCCACCCACATGGCTCAAGGATGGACACATGGG...CTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp CACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACACCTTTTCCTCCCCCTaGAGCCCACTCCAACCTGGC +
Preference number: 5 (lower is better)
Translates to: HMARAMIRGWFGWFTVAHTFSSP*SPLQPG
Trigger: GCCAGGTTGGAGTGGGCTCAAGGGGGAGGAAAAGGT...GTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp CCAGTGATGAAGCTCCCCAAGCTTCACTTGACTCTGAGGATCTTCTACGCCAGGCCACCCTGCCCGAAGTaGGCTCCCTGCTCACTGAGG +
Preference number: 5 (lower is better)
Translates to: PVMKLPKLHLTLRIFYARPPCPK*APCSLR
Trigger: CCTCAGTGAGCAGGGAGCCAACTTCGGGCAGGGTGG...CCTGGCGTAGAAGATCCTCAGAGTCAAGTGAAGCTTGGGGAGCTTCATCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp AACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCAGCCCCACTCAGGGCTaGAGTGTCCAGGAGGAGTCC +
Preference number: 5 (lower is better)
Translates to: NAHGESDDSGLVWLVHCGSPTQG*SVQEES
Trigger: GGACTCCTCCTGGACACTCAAGCCCTGAGTGGGGCT...GCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp GGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCACCGTCACCTTGCCTTTaGCCCCATGAGGCCCGTTTT +
Preference number: 5 (lower is better)
Translates to: GVGLVGSLWPTEHSSLASPSPCL*PHEARF
Trigger: AAAACGGGCCTCATGGGGCAAAAGGCAAGGTGACGG...TGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp ATGATGACTGTGTGGCCGCCGGGGAGATGCGTGGGGCCATCTGGAGGAGTCTGGACTGGAGTTATGGGTTaGGGGGAAGAAGACCACAGA +
Preference number: 5 (lower is better)
Translates to: MMTVWPPGRCVGPSGGVWTGVMG*GEEDHR
Trigger: TCTGTGGTCTTCTTCCCCCAAACCCATAACTCCAGT...CCAGACTCCTCCAGATGGCCCCACGCATCTCCCCGGCGGCCACACAGTCATCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp GGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGCTGGGGGTTAGGGCCTaGGGGTTTCTGGCTAGAAAC +
Preference number: 5 (lower is better)
Translates to: GLVWLVHCGPLNTRPWPQLGVRA*GFLARN
Trigger: GTTTCTAGCCAGAAACCCCAAGGCCCTAACCCCCAG...CTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS CCA 90 bp TTCAGGCGGATACACTCTTTCAGCACCTTCACGGCACGGGCAGACTaGGTCACTCAGCTGGGAGAGCAGCATCAAGCTTCTATCCTGCCG +
Preference number: 5 (lower is better)
Translates to: FRRIHSFSTFTARAD*VTQLGEQHQASILP
Trigger: CGGCAGGATAGAAGCTTGATGCTGCTCTCCCAGCTGAGTGACCCAGTCTGCCCGTGCCGTGAAGGTGCTGAAAGAGTGTATCCGCCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556490.5
CDS-3UTR CAA 90 bp GAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTTTGGCCGACAGCTGCTaGACGAGCTCAGGGATCCGC +
Preference number: 5 (lower is better)
Translates to: ESDDSGLVWLVHCGPLNTLADSC*TSSGIR
Trigger: GCGGATCCCTGAGCTCGTCAAGCAGCTGTCGGCCAA...AGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp CAAAACTGCATCCCCAGCATGGCTCTGGTCAAGGTCACTGCCAACCTGCACACCTCTGCCATGTCATCGTaGGCGATGAGCTTGGCCGAC +
Preference number: 5 (lower is better)
Translates to: QNCIPSMALVKVTANLHTSAMSS*AMSLAD
Trigger: GTCGGCCAAGCTCATCGCCAACGATGACATGGCAGA...GGTGTGCAGGTTGGCAGTGACCTTGACCAGAGCCATGCTGGGGATGCAGTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp TCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTTTGAAGCTGAAGAGCTaGGCGGACATACCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: SGLVWLVHCGPLNTRPWPLKLKS*ADIPQS
Trigger: GCTCTGGGGTATGTCCGCCAAGCTCTTCAGCTTCAA...AGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR CAA 90 bp AACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCGTGCCTGCTCCACTCTaGAGGCTGCTACCGATGTGG +
Preference number: 5 (lower is better)
Translates to: NAHGESDDSGLVWLVHCGVPAPL*RLLPMW
Trigger: CCACATCGGTAGCAGCCTCAAGAGTGGAGCAGGCAC...GCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CAA 90 bp ACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCGAGGTTGGCAGCTTCTaGGGTACAGGCTGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: THMARAMIRGWFGWFTVAEVGSF*GTGCGF
Trigger: GAAGCCACAGCCTGTACCCAAGAAGCTGCCAACCTC...GGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR CAA 90 bp GTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGGAGGTTGGCAGCTTCTaGGGTACAGGCTGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: VGLVGSLWPTEHSSLASVEVGSF*GTGCGF
Trigger: GAAGCCACAGCCTGTACCCAAGAAGCTGCCAACCTC...CACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR CAA 90 bp GCAATGGCCCTGGACTATCCAGGGGGCCCAGAGCAACCAGCAGAGTCCTTAGAGGGACATTGTGGGACATaGGGAAGAGGTTGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: AMALDYPGGPEQPAESLEGHCGT*GRGWQL
Trigger: AAGCTGCCAACCTCTTCCCAATGTCCCACAATGTCC...CTCTAAGGACTCTGCTGGTTGCTCTGGGCCCCCTGGATAGTCCAGGGCCATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp GGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTTCCAGGCAAGGGCTaGAGAAGCCATCAGGGGTTT +
Preference number: 5 (lower is better)
Translates to: GVGLVGSLWPTEHSSLASVPGKG*RSHQGF
Trigger: AAACCCCTGATGGCTTCTCAAGCCCTTGCCTGGAAC...TGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp GGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACTGCAGTGAGTCGAGATaGTGCCATTGCGCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: GESDDSGLVWLVHCGPLNCSESR*CHCAPA
Trigger: GGCTGGAGCGCAATGGCACAATCTCGACTCACTGCA...GTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp TTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCATGAGGCGGTCACTCTaGTGTTCAGGTATCCTGCTC +
Preference number: 5 (lower is better)
Translates to: FGVGLVGSLWPTEHSSLAMRRSL*CSGILL
Trigger: GAGCAGGATACCTGAACACAAGAGTGACCGCCTCAT...GGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000555005.5
CDS-3UTR CAA 90 bp GTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTTGAAGCTGAAGAGCTaGGCGGACATACCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: VGLVGSLWPTEHSSLASVLKLKS*ADIPQS
Trigger: GCTCTGGGGTATGTCCGCCAAGCTCTTCAGCTTCAA...CACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR CAA 90 bp CACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTTGAAGCTGAAGAGCTaGGCGGACATACCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: HMARAMIRGWFGWFTVAHLKLKS*ADIPQS
Trigger: GCTCTGGGGTATGTCCGCCAAGCTCTTCAGCTTCAA...GTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR CAA 90 bp CACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACGTTGGCATCGTCACCTaGAAGCTGAAGAGCTTGGCG +
Preference number: 5 (lower is better)
Translates to: HMARAMIRGWFGWFTVAHVGIVT*KLKSLA
Trigger: CGCCAAGCTCTTCAGCTTCAAGGTGACGATGCCAAC...GTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR CAA 90 bp GAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGTGCCTGCTCCACTCTaGAGGCTGCTACCGATGTGG +
Preference number: 5 (lower is better)
Translates to: ETHMARAMIRGWFGWFTVVPAPL*RLLPMW
Trigger: CCACATCGGTAGCAGCCTCAAGAGTGGAGCAGGCAC...CACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CAA 90 bp CATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAGTGCAGGAGGCTGCTaGGGCAGGACTGAATTGCAT +
Preference number: 5 (lower is better)
Translates to: HGESDDSGLVWLVHCGPLSAGGC*GRTELH
Trigger: ATGCAATTCAGTCCTGCCCAAGCAGCCTCCTGCACT...CAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp GCAATGGCCCTGGACTATCCAGGGGGCCCAGAGCAACCAGCAGAGTCCTTAGAGCTGACCTCTTCCTCTTaGTCTATGCTTGTCCCGAAG +
Preference number: 5 (lower is better)
Translates to: AMALDYPGGPEQPAESLELTSSS*SMLVPK
Trigger: CTTCGGGACAAGCATAGACAAAGAGGAAGAGGTCAG...CTCTAAGGACTCTGCTGGTTGCTCTGGGCCCCCTGGATAGTCCAGGGCCATTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS TCA 90 bp GTAGGTTTTTGTGTTTGCTCCTTTGCGGAGAGGATCGTCCAGAGGTaGCTGGCACGGTGGATCCTCCAGAGGGTTCCAGTAGCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: VGFCVCSFAERIVQR*LARWILQRVPVALL
Trigger: GAGCAGAGCTACTGGAACCCTCTGGAGGATCCACCGTGCCAGTCACCTCTGGACGATCCTCTCCGCAAAGGAGCAAACACAAAAACCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000555005.5
CDS-3UTR CAA 90 bp GGTACTGCTGAATGGCAGGCTAAGCTCAGGCTGGAAACCCTGACCTCCTGCCATATGAGGCGGTCACTCTaGTGTTCAGGTATCCTGCTC +
Preference number: 5 (lower is better)
Translates to: GTAEWQAKLRLETLTSCHMRRSL*CSGILL
Trigger: GAGCAGGATACCTGAACACAAGAGTGACCGCCTCAT...ATGGCAGGAGGTCAGGGTTTCCAGCCTGAGCTTAGCCTGCCATTCAGCAGTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp AAACCAAAACCAGGGCTGTTGCTGCAAAAAGGAGGCCTGGGTGCTGAGGACGCAGTTGGCATCGTCACCTaGAAGCTGAAGAGCTTGGCG +
Preference number: 5 (lower is better)
Translates to: KPKPGLLLQKGGLGAEDAVGIVT*KLKSLA
Trigger: CGCCAAGCTCTTCAGCTTCAAGGTGACGATGCCAAC...TGCGTCCTCAGCACCCAGGCCTCCTTTTTGCAGCAACAGCCCTGGTTTTGGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp GGATTTCCATATCTGCAGCATGTGCTTACAAGTCAGCAGTGCCTCGTCCGGGCCGTTGGCATCGTCACCTaGAAGCTGAAGAGCTTGGCG +
Preference number: 5 (lower is better)
Translates to: GFPYLQHVLTSQQCLVRAVGIVT*KLKSLA
Trigger: CGCCAAGCTCTTCAGCTTCAAGGTGACGATGCCAAC...GGCCCGGACGAGGCACTGCTGACTTGTAAGCACATGCTGCAGATATGGAAATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555239.5
CDS-3UTR CAA 90 bp GAACACTCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCATTGGGCAGGACTGAATaGCATGCTCCAATTCCAAAG +
Preference number: 5 (lower is better)
Translates to: EHSSLASVWQIHPLGAMALGRTE*HAPIPK
Trigger: CTTTGGAATTGGAGCATGCAATTCAGTCCTGCCCAA...TGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGAGTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp AGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTAGGACTGTGCAGACATaGGACTGTGTGGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: RNAHGESDDSGLVWLVHCRTVQT*DCVGLG
Trigger: CCCCAGCCCCACACAGTCCAATGTCTGCACAGTCCT...ACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp AACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCATCTGTGTCACACATaGCTGTGCCCTCAGTGCCTG +
Preference number: 5 (lower is better)
Translates to: NAHGESDDSGLVWLVHCGHLCHT*LCPQCL
Trigger: CAGGCACTGAGGGCACAGCAATGTGTGACACAGATG...GCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp GCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCATGTAGAGATAGGGTCTaGCTCTCTCATGCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: AHGESDDSGLVWLVHCGPCRDRV*LSHAGW
Trigger: CCAGCCTGCATGAGAGAGCAAGACCCTATCTCTACA...TGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS CCA 90 bp TGTGGGACATTGGGAAGAGGTTGGCAGCTTCTTGGGTACAGGCTGTaGCTTCTGCAGGCTTCCCGATGCCGATATAGACTTCAGCTGATC +
Preference number: 5 (lower is better)
Translates to: CGTLGRGWQLLGYRL*LLQASRCRYRLQLI
Trigger: GATCAGCTGAAGTCTATATCGGCATCGGGAAGCCTGCAGAAGCCACAGCCTGTACCCAAGAAGCTGCCAACCTCTTCCCAATGTCCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556960.1
CDS-3UTR CAA 90 bp CATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGTTTGTGTTTGCTCCTTaGCGGAGAGGATCGTCCAGA +
Preference number: 5 (lower is better)
Translates to: HGESDDSGLVWLVHCGPLFVFAP*RRGSSR
Trigger: TCTGGACGATCCTCTCCGCAAAGGAGCAAACACAAA...CAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000555005.5
CDS-3UTR CAA 90 bp TTCTGCAGGCTTCCCGATGCCGATATAGACTTCAGCTGCATGGAGCCAGATCTGGTTGGCATCGTCACCTaGAAGCTGAAGAGCTTGGCG +
Preference number: 5 (lower is better)
Translates to: FCRLPDADIDFSCMEPDLVGIVT*KLKSLA
Trigger: CGCCAAGCTCTTCAGCTTCAAGGTGACGATGCCAAC...CAGATCTGGCTCCATGCAGCTGAAGTCTATATCGGCATCGGGAAGCCTGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS-3UTR CAA 90 bp GCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCAAGCGATGATTCGGGGTaGGTTTGGTTGGTTCACTGT +
Preference number: 5 (lower is better)
Translates to: AHGESDDSGLVWLVHCGPSDDSG*VWLVHC
Trigger: ACAGTGAACCAACCAAACCAACCCCGAATCATCGCT...TGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CAA 90 bp GGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGCAGACCTGGGCACTTTaGAAATGTTTATCCCTCAGG +
Preference number: 5 (lower is better)
Translates to: GLVWLVHCGPLNTRPWPQQTWAL*KCLSLR
Trigger: CCTGAGGGATAAACATTTCAAAAGTGCCCAGGTCTG...CTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp TTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTAGGGGACCAGATCACTaGAGACCAGGAGTTGGAGAT +
Preference number: 5 (lower is better)
Translates to: LVWLVHCGPLNTRPWPQCRGPDH*RPGVGD
Trigger: ATCTCCAACTCCTGGTCTCAAGTGATCTGGTCCCCT...ACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp TTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCACTTGGAAGGATGTCTaGATCCAGAGTAAAGGCTCC +
Preference number: 5 (lower is better)
Translates to: FGVGLVGSLWPTEHSSLATWKDV*IQSKGS
Trigger: GGAGCCTTTACTCTGGATCAAGACATCCTTCCAAGT...GGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp TTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCGCCAGGCACTTCACATaGATGTTTCACTTAACCCCA +
Preference number: 5 (lower is better)
Translates to: FGVGLVGSLWPTEHSSLAARHFT*MFHLTP
Trigger: TGGGGTTAAGTGAAACATCAATGTGAAGTGCCTGGC...GGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp ACTCCCTACACCCCTTCCCTGGCTTCATCTTTCTCCATGCGTCACCCCACCTGCTTTGCGGAGAAGTCTTaGTATTTGAGGGGACTGCAG +
Preference number: 5 (lower is better)
Translates to: TPYTPSLASSFSMRHPTCFAEKS*YLRGLQ
Trigger: CTGCAGTCCCCTCAAATACAAAGACTTCTCCGCAAA...GCAGGTGGGGTGACGCATGGAGAAAGATGAAGCCAGGGAAGGGGTGTAGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS TCA 90 bp GCTCCACTCTTGAGGCTGCTACCGATGTGGCATGGACGGAGCCTGTaGGAGGTTTTTGAGAAGACTCTATCAGGAGCGAAAGAACAGACC +
Preference number: 5 (lower is better)
Translates to: APLLRLLPMWHGRSL*EVFEKTLSGAKEQT
Trigger: GGTCTGTTCTTTCGCTCCTGATAGAGTCTTCTCAAAAACCTCTCACAGGCTCCGTCCATGCCACATCGGTAGCAGCCTCAAGAGTGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557059.1
CDS-3UTR CAA 90 bp GGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGTGGTGTAGGTTTTTGTGTTaGCTCCTTTGCGGAGAGGAT +
Preference number: 5 (lower is better)
Translates to: GLVGSLWPTEHSSLASVWCRFLC*LLCGED
Trigger: ATCCTCTCCGCAAAGGAGCAAACACAAAAACCTACA...CCACACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000555005.5
CDS-3UTR CAA 90 bp GAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTGGACATTGTGGGACATaGGGAAGAGGTTGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: ESDDSGLVWLVHCGPLNTGHCGT*GRGWQL
Trigger: AAGCTGCCAACCTCTTCCCAATGTCCCACAATGTCC...AGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
CDS-3UTR CAA 90 bp AAACCAAAACCAGGGCTGTTGCTGCAAAAAGGAGGCCTGGGTGCTGAGGACGCAAGCGATGATTCGGGGTaGGTTTGGTTGGTTCACTGT +
Preference number: 5 (lower is better)
Translates to: KPKPGLLLQKGGLGAEDASDDSG*VWLVHC
Trigger: ACAGTGAACCAACCAAACCAACCCCGAATCATCGCT...TGCGTCCTCAGCACCCAGGCCTCCTTTTTGCAGCAACAGCCCTGGTTTTGGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp GATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCAGCGATGATTCGGGGTaGGTTTGGTTGGTTCACTGT +
Preference number: 5 (lower is better)
Translates to: DDSGLVWLVHCGPLNTRPSDDSG*VWLVHC
Trigger: ACAGTGAACCAACCAAACCAACCCCGAATCATCGCT...GGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CAA 90 bp AACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCAGCGATGATTCGGGGTaGGTTTGGTTGGTTCACTGT +
Preference number: 5 (lower is better)
Translates to: NAHGESDDSGLVWLVHCGSDDSG*VWLVHC
Trigger: ACAGTGAACCAACCAAACCAACCCCGAATCATCGCT...GCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000555005.5
ENST00000555894.5
CDS-3UTR CAA 90 bp GAACACTCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCAATCTTTACAACCACCTaGTTCTCCCCATTTCACAGA +
Preference number: 5 (lower is better)
Translates to: EHSSLASVWQIHPLGAMAIFTTT*FSPFHR
Trigger: TCTGTGAAATGGGGAGAACAAGGTGGTTGTAAAGAT...TGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGAGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp CCTCTAGGCTTCAGGGCACCTAAGTTCAGAGCTCAGCCCTCCATATTTCCCTGTAGGGTGGGCACCTTCTaGTCACTCAATGTCACTGTC +
Preference number: 5 (lower is better)
Translates to: PLGFRAPKFRAQPSIFPCRVGTF*SLNVTV
Trigger: GACAGTGACATTGAGTGACAAGAAGGTGCCCACCCT...ACAGGGAAATATGGAGGGCTGAGCTCTGAACTTAGGTGCCCTGAAGCCTAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp ACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCATAATCACTGCAGCCTaGACCTCCCACTTTGTTACC +
Preference number: 5 (lower is better)
Translates to: THMARAMIRGWFGWFTVAIITAA*TSHFVT
Trigger: GGTAACAAAGTGGGAGGTCAAGGCTGCAGTGATTAT...GGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp GCAATGGCCCTGGACTATCCAGGGGGCCCAGAGCAACCAGCAGAGTCCTTAGAGCTCCATAGGCATTTATaGGTTGACAAGGTTGGCATA +
Preference number: 5 (lower is better)
Translates to: AMALDYPGGPEQPAESLELHRHL*VDKVGI
Trigger: TATGCCAACCTTGTCAACCAATAAATGCCTATGGAG...CTCTAAGGACTCTGCTGGTTGCTCTGGGCCCCCTGGATAGTCCAGGGCCATTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp GTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTCAGTGAAAGGCACATCTAGGTaGAGCTGGATTTCAGAGGGT +
Preference number: 5 (lower is better)
Translates to: VGLVGSLWPTEHSSLASVKGTSR*SWISEG
Trigger: ACCCTCTGAAATCCAGCTCAACCTAGATGTGCCTTT...CACTGAGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS GCA 90 bp AGGGTTCCAGTAGCTCTGCTCACACATACCCCGCAACAAGATCTCTaGCAGCTGCCTGGCTATTGTCATTCGCAGGTTTTGAGTCGTTCT +
Preference number: 5 (lower is better)
Translates to: RVPVALLTHTPQQDL*QLPGYCHSQVLSRS
Trigger: AGAACGACTCAAAACCTGCGAATGACAATAGCCAGGCAGCTGGCAGAGATCTTGTTGCGGGGTATGTGTGAGCAGAGCTACTGGAACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000557766.1
CDS CCA 90 bp AGAGAAACGCGGGCAATCACGGCCCGGGGCCTTAGTTTCCATCCTTaGGCTTTAGCTAATCTTTTTGTCAACAAACAGAGCACATGCCCC +
Preference number: 5 (lower is better)
Translates to: RETRAITARGLSFHP*ALANLFVNKQSTCP
Trigger: GGGGCATGTGCTCTGTTTGTTGACAAAAAGATTAGCTAAAGCCCAAGGATGGAAACTAAGGCCCCGGGCCGTGATTGCCCGCGTTTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557059.1
CDS-3UTR CAA 90 bp GAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGTTTGTGTTTGCTCCTTaGCGGAGAGGATCGTCCAGA +
Preference number: 5 (lower is better)
Translates to: ETHMARAMIRGWFGWFTVFVFAP*RRGSSR
Trigger: TCTGGACGATCCTCTCCGCAAAGGAGCAAACACAAA...CACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000555005.5
CDS-3UTR CAA 90 bp AGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTCTCTGGTTCCGGATCTaGCTGTCTACTCTGTGGGAT +
Preference number: 5 (lower is better)
Translates to: RNAHGESDDSGLVWLVHCLWFRI*LSTLWD
Trigger: ATCCCACAGAGTAGACAGCAAGATCCGGAACCAGAG...ACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp TCGTCCCTGGCCTCAGTGTGGCAGATTCATCCCCTTGGGGCGATGGCACAAGCCGATTTGAGATGCGATTaGGGTAGAAAAGACAAGATT +
Preference number: 5 (lower is better)
Translates to: SSLASVWQIHPLGAMAQADLRCD*GRKDKI
Trigger: AATCTTGTCTTTTCTACCCAAATCGCATCTCAAATC...GGCTTGTGCCATCGCCCCAAGGGGATGAATCTGCCACACTGAGGCCAGGGACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp GCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCAATTAAATATCTATACTaGGCTGGGCGCTGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: AHGESDDSGLVWLVHCGPIKYLY*AGRCGS
Trigger: TGAGCCACAGCGCCCAGCCAAGTATAGATATTTAAT...TGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp GGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACATGCTCTTGGTAGTTTaGAGGGGTATTGGTCAGGTA +
Preference number: 5 (lower is better)
Translates to: GESDDSGLVWLVHCGPLNMLLVV*RGIGQV
Trigger: TACCTGACCAATACCCCTCAAAACTACCAAGAGCAT...GTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp TCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCCCTGGCCTTTCTCCTTTGATCTGTaGGTGGACATTTGGATTGTG +
Preference number: 5 (lower is better)
Translates to: SGLVWLVHCGPLNTRPWPFSFDL*VDIWIV
Trigger: CACAATCCAAATGTCCACCAACAGATCAAAGGAGAA...AGGCCAGGGACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp CCAGGGTGGGCACCTTCTTGTCACTCAATGTCACTGTCTTACAGAGGTGTCCCCATGTCTTTATCATCTTaGAAACCCCTCCCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: PGWAPSCHSMSLSYRGVPMSLSS*KPLPLA
Trigger: GGCCAGAGGGAGGGGTTTCAAAGATGATAAAGACAT...GGGGACACCTCTGTAAGACAGTGACATTGAGTGACAAGAAGGTGCCCACCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS TCA 90 bp GAGGCTGCTACCGATGTGGCATGGACGGAGCCTGTGAGAGGTTTTTaGGAAGACTCTATCAGGAGCGAAAGAACAGACCCAACCAATCAA +
Preference number: 5 (lower is better)
Translates to: EAATDVAWTEPVRGF*EDSIRSERTDPTNQ
Trigger: TTGATTGGTTGGGTCTGTTCTTTCGCTCCTGATAGAGTCTTCTCAAAAACCTCTCACAGGCTCCGTCCATGCCACATCGGTAGCAGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557059.1
CDS-3UTR CAA 90 bp CCAGGGTGGGCACCTTCTTGTCACTCAATGTCACTGTCTTACAGAGGTGTCCCCTACCCTTTCTATCTCTaGGAGATACAGGAGTGCGAT +
Preference number: 5 (lower is better)
Translates to: PGWAPSCHSMSLSYRGVPYPFYL*EIQECD
Trigger: ATCGCACTCCTGTATCTCCAAGAGATAGAAAGGGTA...GGGGACACCTCTGTAAGACAGTGACATTGAGTGACAAGAAGGTGCCCACCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp CCTATTTCCACATCCTTCTCTCTGAATGCAAGTCACCAAGTCCAGCCCACACTCGGATCTGACTGCATTTaGCATTCATGGGGGCACCGT +
Preference number: 5 (lower is better)
Translates to: PISTSFSLNASHQVQPTLGSDCI*HSWGHR
Trigger: ACGGTGCCCCCATGAATGCAAAATGCAGTCAGATCC...GAGTGTGGGCTGGACTTGGTGACTTGCATTCAGAGAGAAGGATGTGGAAATAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS TCA 90 bp GCACTGGATCCCCATATCCACCAGCATTTCCCCAAATGCAATCCATaGACACTGATTTCCTGTCTCGGGATCGCTGAAGTCTGGCAAAGT +
Preference number: 5 (lower is better)
Translates to: ALDPHIHQHFPKCNP*TLISCLGIAEVWQS
Trigger: ACTTTGCCAGACTTCAGCGATCCCGAGACAGGAAATCAGTGTTCATGGATTGCATTTGGGGAAATGCTGGTGGATATGGGGATCCAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS-3UTR CAA 90 bp TCCGGGCCTCGGCAGAGTGACTGCAACTTCACTTTGGAAAACAGTAGTATGAAAATGAGGCGGTCACTCTaGTGTTCAGGTATCCTGCTC +
Preference number: 5 (lower is better)
Translates to: SGPRQSDCNFTLENSSMKMRRSL*CSGILL
Trigger: GAGCAGGATACCTGAACACAAGAGTGACCGCCTCAT...TTTCATACTACTGTTTTCCAAAGTGAAGTTGCAGTCACTCTGCCGAGGCCCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555239.5
CDS-3UTR CAA 90 bp GAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTTCTGCAGCTACGCTCTaGAAAGAGACTTCACCTTTT +
Preference number: 5 (lower is better)
Translates to: ESDDSGLVWLVHCGPLNTSAATL*KETSPF
Trigger: AAAAGGTGAAGTCTCTTTCAAGAGCGTAGCTGCAGA...AGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp GCCAAGCACACCCCTGAGAAACTGGAAAGGGCAAAGTTTGATGTCTTTCCTAGTGAGAAGTCTTTGTATTaGAGGGGACTGCAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: AKHTPEKLERAKFDVFPSEKSLY*RGLQGG
Trigger: GCCTCCCTGCAGTCCCCTCAAATACAAAGACTTCTC...ACTAGGAAAGACATCAAACTTTGCCCTTTCCAGTTTCTCAGGGGTGTGCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp CCAGGGTGGGCACCTTCTTGTCACTCAATGTCACTGTCTTACAGAGGTGTCCCCTTGGCCATGATCAGATaGGATTCTTGTAGGAATTCT +
Preference number: 5 (lower is better)
Translates to: PGWAPSCHSMSLSYRGVPLAMIR*DSCRNS
Trigger: AGAATTCCTACAAGAATCCAATCTGATCATGGCCAA...GGGGACACCTCTGTAAGACAGTGACATTGAGTGACAAGAAGGTGCCCACCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp TCACCAGGAAACCCTATTGTCCTCAGGGGGTCAAGGGCCAAACAGCAGAAGATGTGTCATTCGCAGGTTTaGAGTCGTTCTTGTTTCAAC +
Preference number: 5 (lower is better)
Translates to: SPGNPIVLRGSRAKQQKMCHSQV*SRSCFN
Trigger: GTTGAAACAAGAACGACTCAAAACCTGCGAATGACA...CATCTTCTGCTGTTTGGCCCTTGACCCCCTGAGGACAATAGGGTTTCCTGGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp TATGAAATTTTCTGGGTATTCACTCAGGGCCATGTCGATGATGTTCAGAGCGTCTTGAAGCTGAAGAGCTaGGCGGACATACCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: YEIFWVFTQGHVDDVQSVLKLKS*ADIPQS
Trigger: GCTCTGGGGTATGTCCGCCAAGCTCTTCAGCTTCAA...GACGCTCTGAACATCATCGACATGGCCCTGAGTGAATACCCAGAAAATTTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555239.5
CDS-3UTR CAA 90 bp AAAAACAAGAGAAACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGTGTGGGATTCGGACTTaGGCTCAAACACCTCTACAC +
Preference number: 5 (lower is better)
Translates to: KNKRNAHGESDDSGLVWLCGIRT*AQTPLH
Trigger: GTGTAGAGGTGTTTGAGCCAAAGTCCGAATCCCACA...CAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTTTCTCTTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp AAACCAAAACCAGGGCTGTTGCTGCAAAAAGGAGGCCTGGGTGCTGAGGACGCAAAGTTGATCCCCTATTaGTACATTACAGGATGCTCT +
Preference number: 5 (lower is better)
Translates to: KPKPGLLLQKGGLGAEDAKLIPY*YITGCS
Trigger: AGAGCATCCTGTAATGTACAAATAGGGGATCAACTT...TGCGTCCTCAGCACCCAGGCCTCCTTTTTGCAGCAACAGCCCTGGTTTTGGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS GCA 90 bp TATTACCCTTTCTATCTCTTGGAGATACAGGAGTGCGATGTCCCCTaGTTTCTCATAACAGGTGATGACATCCTGTTCCCGGTCCACATG +
Preference number: 5 (lower is better)
Translates to: YYPFYLLEIQECDVP*FLITGDDILFPVHM
Trigger: CATGTGGACCGGGAACAGGATGTCATCACCTGTTATGAGAAAGCAGGGGACATCGCACTCCTGTATCTCCAAGAGATAGAAAGGGTAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000557766.1
CDS CCA 90 bp TCAGGCGGATACACTCTTTCAGCACCTTCACGGCACGGGCAGACTTaGCAAGAGAAGATTATTTCCGTGAAACTCAAAGTGTTTGACAGA +
Preference number: 5 (lower is better)
Translates to: SGGYTLSAPSRHGQT*QEKIISVKLKVFDR
Trigger: TCTGTCAAACACTTTGAGTTTCACGGAAATAATCTTCTCTTGCCAAGTCTGCCCGTGCCGTGAAGGTGCTGAAAGAGTGTATCCGCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556749.1
CDS-3UTR CAA 90 bp CCTATTTCCACATCCTTCTCTCTGAATGCAAGTCACCAAGTCCAGCCCACACTCTGTAGGTTTTTGTGTTaGCTCCTTTGCGGAGAGGAT +
Preference number: 5 (lower is better)
Translates to: PISTSFSLNASHQVQPTLCRFLC*LLCGED
Trigger: ATCCTCTCCGCAAAGGAGCAAACACAAAAACCTACA...GAGTGTGGGCTGGACTTGGTGACTTGCATTCAGAGAGAAGGATGTGGAAATAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp CAACCAGCGTGGCTTCGGCCAGTTAACAGACCACTTCTTGGAGTCATGAGGATTCCAGTTTATGGTAATTaGCTGCAACCACAGGCAATT +
Preference number: 5 (lower is better)
Translates to: QPAWLRPVNRPLLGVMRIPVYGN*LQPQAI
Trigger: AATTGCCTGTGGTTGCAGCAAATTACCATAAACTGG...AATCCTCATGACTCCAAGAAGTGGTCTGTTAACTGGCCGAAGCCACGCTGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp GAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTTGGAAAGGGCAAAGTTaGATGTCTTTCCTAGTACTT +
Preference number: 5 (lower is better)
Translates to: ESDDSGLVWLVHCGPLNTWKGQS*MSFLVL
Trigger: AAGTACTAGGAAAGACATCAAACTTTGCCCTTTCCA...AGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS-3UTR CAA 90 bp AACGCACATGGCGAGAGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCATAGGCATTTATTGGTaGACAAGGTTGGCATATGTT +
Preference number: 5 (lower is better)
Translates to: NAHGESDDSGLVWLVHCGIGIYW*TRLAYV
Trigger: AACATATGCCAACCTTGTCAACCAATAAATGCCTAT...GCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCTCTCGCCATGTGCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS TCA 90 bp CACCTTCACGGCACGGGCAGACTTGGCAAGAGAAGATTATTTCCGTaGAACTCAAAGTGTTTGACAGAACCGAATACTACAGCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: HLHGTGRLGKRRLFP*NSKCLTEPNTTAFS
Trigger: TGAGAAGGCTGTAGTATTCGGTTCTGTCAAACACTTTGAGTTTCACGGAAATAATCTTCTCTTGCCAAGTCTGCCCGTGCCGTGAAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556749.1
CDS-3UTR CAA 90 bp AGCGATGATTCGGGGTTGGTTTGGTTGGTTCACTGTGGCCCACTGAACACTCGTCGTCCTCACAAACATTaGTTATTGTCTGTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: SDDSGLVWLVHCGPLNTRRPHKH*LLSVFL
Trigger: CAAAAAGACAGACAATAACAAATGTTTGTGAGGACG...ACGAGTGTTCAGTGGGCCACAGTGAACCAACCAAACCAACCCCGAATCATCGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS TCA 90 bp ATCCCCATATCCACCAGCATTTCCCCAAATGCAATCCATGAACACTaGTTTCCTGTCTCGGGATCGCTGAAGTCTGGCAAAGTAATTGTA +
Preference number: 5 (lower is better)
Translates to: IPISTSISPNAIHEH*FPVSGSLKSGKVIV
Trigger: TACAATTACTTTGCCAGACTTCAGCGATCCCGAGACAGGAAATCAGTGTTCATGGATTGCATTTGGGGAAATGCTGGTGGATATGGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS CCA 90 bp GGCAGTATTTGCCATAAGCTAAAGGCTCAGGTCATTCAAATGCACTaGATCCCCATATCCACCAGCATTTCCCCAAATGCAATCCATGAA +
Preference number: 5 (lower is better)
Translates to: GSICHKLKAQVIQMH*IPISTSISPNAIHE
Trigger: TTCATGGATTGCATTTGGGGAAATGCTGGTGGATATGGGGATCCAGTGCATTTGAATGACCTGAGCCTTTAGCTTATGGCAAATACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS-3UTR CAA 90 bp CCTATTTCCACATCCTTCTCTCTGAATGCAAGTCACCAAGTCCAGCCCACACTCAGAAAGTTCATCGGTTaGGGTTTGTCTGATGTTTTC +
Preference number: 5 (lower is better)
Translates to: PISTSFSLNASHQVQPTLRKFIG*GLSDVF
Trigger: GAAAACATCAGACAAACCCAAACCGATGAACTTTCT...GAGTGTGGGCTGGACTTGGTGACTTGCATTCAGAGAGAAGGATGTGGAAATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS TCA 90 bp CCCCAGAGCCTCTGGGATCTTTCCAAACTACAACCCAAAATAAGTTaGTCTGAGAAACAAATTGCAATGCCGCATGCAAAGCAGATGTGT +
Preference number: 5 (lower is better)
Translates to: PQSLWDLSKLQPKIS*SEKQIAMPHAKQMC
Trigger: ACACATCTGCTTTGCATGCGGCATTGCAATTTGTTTCTCAGATCAACTTATTTTGGGTTGTAGTTTGGAAAGATCCCAGAGGCTCTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554654.5
CDS TCA 90 bp GCAGACTTGGCAAGAGAAGATTATTTCCGTGAAACTCAAAGTGTTTaGCAGAACCGAATACTACAGCCTTCTCAGAGGGGTTTTTGGTCA +
Preference number: 5 (lower is better)
Translates to: ADLAREDYFRETQSV*QNRILQPSQRGFWS
Trigger: TGACCAAAAACCCCTCTGAGAAGGCTGTAGTATTCGGTTCTGTCAAACACTTTGAGTTTCACGGAAATAATCTTCTCTTGCCAAGTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556749.1
CDS-3UTR CAA 90 bp GCCAAGCACACCCCTGAGAAACTGGAAAGGGCAAAGTTTGATGTCTTTCCTAGTAGCTGCTATAAACATTaGCGGAGAAGTCTTTGTATT +
Preference number: 5 (lower is better)
Translates to: AKHTPEKLERAKFDVFPSSCYKH*RRSLCI
Trigger: AATACAAAGACTTCTCCGCAAATGTTTATAGCAGCT...ACTAGGAAAGACATCAAACTTTGCCCTTTCCAGTTTCTCAGGGGTGTGCTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS TCA 90 bp GAGCCTCTGGGATCTTTCCAAACTACAACCCAAAATAAGTTGATCTaGGAAACAAATTGCAATGCCGCATGCAAAGCAGATGTGTCCAAA +
Preference number: 5 (lower is better)
Translates to: EPLGSFQTTTQNKLI*ETNCNAACKADVSK
Trigger: TTTGGACACATCTGCTTTGCATGCGGCATTGCAATTTGTTTCTCAGATCAACTTATTTTGGGTTGTAGTTTGGAAAGATCCCAGAGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554654.5
CDS TCA 90 bp TCAGAGCTTCTTTATAATCACCTTCCACATAATTCAACTTGGCCATaGTCAGATTGGATTCTTGTAGGAATTCTTAAGGTTCCCTCGGTC +
Preference number: 5 (lower is better)
Translates to: SELLYNHLPHNSTWP*SDWILVGILKVPSV
Trigger: GACCGAGGGAACCTTAAGAATTCCTACAAGAATCCAATCTGATCATGGCCAAGTTGAATTATGTGGAAGGTGATTATAAAGAAGCTCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553948.1
CDS GCA 72 bp GCGGCAGCGCTCGATCTCCGTCTCCAGCCGCGAGCCTaGCTTCTTGGTCGCCATCGCGGCCTGGCCGGGCCC +
Preference number: 6 (lower is better)
Translates to: AAALDLRLQPRA*LLGRHRGLAGP
Trigger: GGGCCCGGCCAGGCCGCGATGGCGACCAAGAAGGCAGGCTCGCGGCTGGAGACGGAGATCGAGCGCTGCCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000553948.1
CDS GCA 72 bp GACTTAAGGTTCCCTCGGTCCAGGGCGGCGGTCAGATaGTTGCGGACCTCAGTCAGCTGGGGCTTGGGGCCT +
Preference number: 6 (lower is better)
Translates to: DLRFPRSRAAVR*LRTSVSWGLGP
Trigger: AGGCCCCAAGCCCCAGCTGACTGAGGTCCGCAAGCATCTGACCGCCGCCCTGGACCGAGGGAACCTTAAGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328459.11
CDS GCA 72 bp TTCTTAAGGTTCCCTCGGTCCAGGGCGGCGGTCAGATaGTTGCGGACCTCAGTCAGCTGGGGCTTGGGGCCT +
Preference number: 6 (lower is better)
Translates to: FLRFPRSRAAVR*LRTSVSWGLGP
Trigger: AGGCCCCAAGCCCCAGCTGACTGAGGTCCGCAAGCATCTGACCGCCGCCCTGGACCGAGGGAACCTTAAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553948.1
CDS CCA 72 bp GATCACCCGCAGCCTGTAGGGCGGGACAGCTGTCAGTaGCAGATCGTCCAGGCCCACCCGGGCGTAAATGTT +
Preference number: 6 (lower is better)
Translates to: DHPQPVGRDSCQ*QIVQAHPGVNV
Trigger: AACATTTACGCCCGGGTGGGCCTGGACGATCTGCCACTGACAGCTGTCCCGCCCTACAGGCTGCGGGTGATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000553948.1
ENST00000557766.1
CDS CAA 90 bp AGCTCTGCCATGTCATCGTTGGCGATGAGCTTGGCCGACAGCTGCTaGACGAGCTCAGGGATCCGCTCCCACTGGCACTCGGAGCGGCAG +
Preference number: 6 (lower is better)
Translates to: SSAMSSLAMSLADSC*TSSGIRSHWHSERQ
Trigger: CTGCCGCTCCGAGTGCCAGTGGGAGCGGATCCCTGAGCTCGTCAAGCAGCTGTCGGCCAAGCTCATCGCCAACGATGACATGGCAGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000553948.1
CDS TCA 72 bp GAGAGAGGGTTCCCGGCGGGGACCTGCGTCACTGAATaGATGAGCTGCAGGGGGCCACACAAAGGTATCGGG +
Preference number: 6 (lower is better)
Translates to: ERGFPAGTCVTE*MSCRGPHKGIG
Trigger: CCCGATACCTTTGTGTGGCCCCCTGCAGCTCATTCATTCAGTGACGCAGGTCCCCGCCGGGAACCCTCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557292.1
CDS GCA 72 bp GCCATGTCATCGTTGGCGATGAGCTTGGCCGACAGCTaGTTGACGAGCTCAGGGATCCGCTCCCACTGGCAC +
Preference number: 6 (lower is better)
Translates to: AMSSLAMSLADS*LTSSGIRSHWH
Trigger: GTGCCAGTGGGAGCGGATCCCTGAGCTCGTCAAGCAGCTGTCGGCCAAGCTCATCGCCAACGATGACATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000553948.1
CDS TCA 72 bp AGTGAGCCGAGATCACACCAGCCTGGCAACGGAGCGTaGCCCTTTGGTAGCGTAGGCTTCTGCGATCACCCG +
Preference number: 6 (lower is better)
Translates to: SEPRSHQPGNGA*PFGSVGFCDHP
Trigger: CGGGTGATCGCAGAAGCCTACGCTACCAAAGGGTCACGCTCCGTTGCCAGGCTGGTGTGATCTCGGCTCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557187.1
CDS TCA 72 bp GAGGGTTCCCGGCGGGGACCTGCGTCACTGAATGAATaGGCTGCAGGGGGCCACACAAAGGTATCGGGTTTG +
Preference number: 6 (lower is better)
Translates to: EGSRRGPASLNE*AAGGHTKVSGL
Trigger: CAAACCCGATACCTTTGTGTGGCCCCCTGCAGCTCATTCATTCAGTGACGCAGGTCCCCGCCGGGAACCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557292.1
CDS CCA 72 bp GCACCTTCACGGCACGGGCAGACTGGGTCACTCAGCTaGGAGAGCAGCATCAAGCTTCTATCCTGCCGTTGG +
Preference number: 6 (lower is better)
Translates to: APSRHGQTGSLS*ESSIKLLSCRW
Trigger: CCAACGGCAGGATAGAAGCTTGATGCTGCTCTCCCAGCTGAGTGACCCAGTCTGCCCGTGCCGTGAAGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556490.5
CDS CAA 72 bp ATGTCATCGTTGGCGATGAGCTTGGCCGACAGCTGCTaGACGAGCTCAGGGATCCGCTCCCACTGGCACTCG +
Preference number: 6 (lower is better)
Translates to: MSSLAMSLADSC*TSSGIRSHWHS
Trigger: CGAGTGCCAGTGGGAGCGGATCCCTGAGCTCGTCAAGCAGCTGTCGGCCAAGCTCATCGCCAACGATGACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000553948.1
CDS TCA 72 bp TGCAGAGAGAGGGTTCCCGGCGGGGACCTGCGTCACTaGATGAATGAGCTGCAGGGGGCCACACAAAGGTAT +
Preference number: 6 (lower is better)
Translates to: CRERVPGGDLRH*MNELQGATQRY
Trigger: ATACCTTTGTGTGGCCCCCTGCAGCTCATTCATTCAGTGACGCAGGTCCCCGCCGGGAACCCTCTCTCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557292.1
CDS GCA 72 bp CTCAGTCCCTACGCAGCTCCGCACATCCAATCAACATaGTCCAACGGGTTTCAGCCCCCTTCAAGCCCCAGG +
Preference number: 6 (lower is better)
Translates to: LSPYAAPHIQST*SNGFQPPSSPR
Trigger: CCTGGGGCTTGAAGGGGGCTGAAACCCGTTGGAGCATGTTGATTGGATGTGCGGAGCTGCGTAGGGACTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556960.1
CDS CAA 72 bp AGGAGAAGCTCTGCCATGTCATCGTTGGCGATGAGCTaGGCCGACAGCTGCTTGACGAGCTCAGGGATCCGC +
Preference number: 6 (lower is better)
Translates to: RRSSAMSSLAMS*ADSCLTSSGIR
Trigger: GCGGATCCCTGAGCTCGTCAAGCAGCTGTCGGCCAAGCTCATCGCCAACGATGACATGGCAGAGCTTCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000553948.1
CDS CAA 72 bp GAGGGCAAGGAGGTGCAGGGAGTTGGCATCGTCACCTaGAAGCTGAAGAGCTTGGCGGACATACCCCAGAGC +
Preference number: 6 (lower is better)
Translates to: EGKEVQGVGIVT*KLKSLADIPQS
Trigger: GCTCTGGGGTATGTCCGCCAAGCTCTTCAGCTTCAAGGTGACGATGCCAACTCCCTGCACCTCCTTGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328459.11
ENST00000553972.5
ENST00000554654.5
ENST00000555005.5
ENST00000555239.5
ENST00000556490.5
CDS CCA 72 bp GCTGCAGAGCCAGGTAGAAAGCTGCTTGGTGATCTGTaGGTGACAGGCTGTGGGCCCTCTGACAGCATCTCA +
Preference number: 6 (lower is better)
Translates to: AAEPGRKLLGDL*VTGCGPSDSIS
Trigger: TGAGATGCTGTCAGAGGGCCCACAGCCTGTCACCCACAGATCACCAAGCAGCTTTCTACCTGGCTCTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555239.5
CDS TCA 72 bp TGTGTTTGCTCCTTTGCGGAGAGGATCGTCCAGAGGTaGCTGGCACGGTGGATCCTCCAGAGGGTTCCAGTA +
Preference number: 6 (lower is better)
Translates to: CVCSFAERIVQR*LARWILQRVPV
Trigger: TACTGGAACCCTCTGGAGGATCCACCGTGCCAGTCACCTCTGGACGATCCTCTCCGCAAAGGAGCAAACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000555005.5
CDS GCA 72 bp CTTCTCCAAACAAAGTCCTTTGGTAGCGTAGGCTTCTaGGATCACCCGCAGCCTGTAGGGCGGGACAGCTGT +
Preference number: 6 (lower is better)
Translates to: LLQTKSFGSVGF*DHPQPVGRDSC
Trigger: ACAGCTGTCCCGCCCTACAGGCTGCGGGTGATCGCAGAAGCCTACGCTACCAAAGGACTTTGTTTGGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000557766.1
CDS CCA 72 bp GCTGCAGAGCCAGGTAGAAAGCTGCTTGGTGATCTGTaGGTGACAGGCTGTGGGCCCTCTGAAATGCAAGAA +
Preference number: 6 (lower is better)
Translates to: AAEPGRKLLGDL*VTGCGPSEMQE
Trigger: TTCTTGCATTTCAGAGGGCCCACAGCCTGTCACCCACAGATCACCAAGCAGCTTTCTACCTGGCTCTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328459.11
ENST00000555005.5
ENST00000556490.5
ENST00000556749.1
CDS CCA 72 bp ATACACTCTTTCAGCACCTTCACGGCACGGGCAGACTaGGTCACTCAGCTGGGAGAGCAGCATCAAGCTTCT +
Preference number: 6 (lower is better)
Translates to: IHSFSTFTARAD*VTQLGEQHQAS
Trigger: AGAAGCTTGATGCTGCTCTCCCAGCTGAGTGACCCAGTCTGCCCGTGCCGTGAAGGTGCTGAAAGAGTGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556490.5
CDS CAA 90 bp GGTTTCAGCCCCCTTCAAGCCCCAGGCTCCCAATCACATCCCTCATaGCTGCTCCAGAGGGATTCTTCTTGCAAGAACTGTGCACCTTCT +
Preference number: 6 (lower is better)
Translates to: GFSPLQAPGSQSHPS*LLQRDSSCKNCAPS
Trigger: AGAAGGTGCACAGTTCTTGCAAGAAGAATCCCTCTGGAGCAGCAATGAGGGATGTGATTGGGAGCCTGGGGCTTGAAGGGGGCTGAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556960.1
CDS GCA 72 bp GTAGCTCTGCTCACACATACCCCGCAACAAGATCTCTaGCAGCTGCCTGGCTATTGTCATTCGCAGGTTTTG +
Preference number: 6 (lower is better)
Translates to: VALLTHTPQQDL*QLPGYCHSQVL
Trigger: CAAAACCTGCGAATGACAATAGCCAGGCAGCTGGCAGAGATCTTGTTGCGGGGTATGTGTGAGCAGAGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000557766.1
CDS CCA 72 bp GGCATGGACGGAGCCTGTCTCGGGATCGCTGAAGTCTaGCAAAGTAATTGTATTAAGCTGTCGTCTGTCAGC +
Preference number: 6 (lower is better)
Translates to: GMDGACLGIAEV*QSNCIKLSSVS
Trigger: GCTGACAGACGACAGCTTAATACAATTACTTTGCCAGACTTCAGCGATCCCGAGACAGGCTCCGTCCATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000555894.5
CDS CCA 72 bp GTGACAGGCTGTGGGCCCTCTGACAGCATCTCATACTaGCCTCTTCTTCCAAGAGCAATGGTGAGTAAGTCA +
Preference number: 6 (lower is better)
Translates to: VTGCGPSDSISY*PLLPRAMVSKS
Trigger: TGACTTACTCACCATTGCTCTTGGAAGAAGAGGCCAGTATGAGATGCTGTCAGAGGGCCCACAGCCTGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555239.5
CDS CAA 72 bp CAGCTGGGAGAGCAGCATCAAGCTTCTATCCTGCCGTaGGACTCCCTCAGCCCACATTTTCATCCAGTATCA +
Preference number: 6 (lower is better)
Translates to: QLGEQHQASILP*DSLSPHFHPVS
Trigger: TGATACTGGATGAAAATGTGGGCTGAGGGAGTCCAACGGCAGGATAGAAGCTTGATGCTGCTCTCCCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556490.5
CDS TCA 72 bp ACCGATGTGGCATGGACGGAGCCTGTGAGAGGTTTTTaGGAAGACTCTATCAGGAGCGAAAGAACAGACCCA +
Preference number: 6 (lower is better)
Translates to: TDVAWTEPVRGF*EDSIRSERTDP
Trigger: TGGGTCTGTTCTTTCGCTCCTGATAGAGTCTTCTCAAAAACCTCTCACAGGCTCCGTCCATGCCACATCGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557059.1
CDS TCA 72 bp TTGAGGCTGCTACCGATGTGGCATGGACGGAGCCTGTaGGAGGTTTTTGAGAAGACTCTATCAGGAGCGAAA +
Preference number: 6 (lower is better)
Translates to: LRLLPMWHGRSL*EVFEKTLSGAK
Trigger: TTTCGCTCCTGATAGAGTCTTCTCAAAAACCTCTCACAGGCTCCGTCCATGCCACATCGGTAGCAGCCTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557059.1
CDS CCA 72 bp CGGGCAATCACGGCCCGGGGCCTTAGTTTCCATCCTTaGGCTTTAGCTAATCTTTTTGTCAACAAACAGAGC +
Preference number: 6 (lower is better)
Translates to: RAITARGLSFHP*ALANLFVNKQS
Trigger: GCTCTGTTTGTTGACAAAAAGATTAGCTAAAGCCCAAGGATGGAAACTAAGGCCCCGGGCCGTGATTGCCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557059.1
CDS CCA 72 bp AGCTGGGAGAGCAGCATCAAGCTTCTATCCTGCCGTTaGACTCCCTCAGCCCACATTTTCATCCAGTATCAT +
Preference number: 6 (lower is better)
Translates to: SWESSIKLLSCR*TPSAHIFIQYH
Trigger: ATGATACTGGATGAAAATGTGGGCTGAGGGAGTCCAACGGCAGGATAGAAGCTTGATGCTGCTCTCCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556490.5
CDS CAA 72 bp TACCGATGTGGCATGGACGGAGCCTGTGAGAGGTTTTaGAGAAGACTCTATCAGGAGCGAAAGAACAGACCC +
Preference number: 6 (lower is better)
Translates to: YRCGMDGACERF*RRLYQERKNRP
Trigger: GGGTCTGTTCTTTCGCTCCTGATAGAGTCTTCTCAAAAACCTCTCACAGGCTCCGTCCATGCCACATCGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557059.1
CDS TCA 72 bp CCCCATATCCACCAGCATTTCCCCAAATGCAATCCATaGACACTGATTTCCTGTCTCGGGATCGCTGAAGTC +
Preference number: 6 (lower is better)
Translates to: PHIHQHFPKCNP*TLISCLGIAEV
Trigger: GACTTCAGCGATCCCGAGACAGGAAATCAGTGTTCATGGATTGCATTTGGGGAAATGCTGGTGGATATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS CAA 72 bp GAGAAGACACAAACAGGTGGAGAGGAGATTCGGTTCTaGAAAGAGGAGAGGAGGAGGAGGAGGAATCTGACA +
Preference number: 6 (lower is better)
Translates to: EKTQTGGEEIRF*KEERRRRRNLT
Trigger: TGTCAGATTCCTCCTCCTCCTCCTCTCCTCTTTCAAGAACCGAATCTCCTCTCCACCTGTTTGTGTCTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557292.1
CDS TCA 72 bp AAATGTTCTCTCCTGAGTAGACACGGGCTCTCCGAGTaGGAGTGTAGGTTTTTGTGTTTGCTCCTTTGCGGA +
Preference number: 6 (lower is better)
Translates to: KCSLLSRHGLSE*ECRFLCLLLCG
Trigger: TCCGCAAAGGAGCAAACACAAAAACCTACACTCTCACTCGGAGAGCCCGTGTCTACTCAGGAGAGAACATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000555005.5
CDS TCA 72 bp TCCACCAGCATTTCCCCAAATGCAATCCATGAACACTaGTTTCCTGTCTCGGGATCGCTGAAGTCTGGCAAA +
Preference number: 6 (lower is better)
Translates to: STSISPNAIHEH*FPVSGSLKSGK
Trigger: TTTGCCAGACTTCAGCGATCCCGAGACAGGAAATCAGTGTTCATGGATTGCATTTGGGGAAATGCTGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS GCA 72 bp TTCTATCTCTTGGAGATACAGGAGTGCGATGTCCCCTaGTTTCTCATAACAGGTGATGACATCCTGTTCCCG +
Preference number: 6 (lower is better)
Translates to: FYLLEIQECDVP*FLITGDDILFP
Trigger: CGGGAACAGGATGTCATCACCTGTTATGAGAAAGCAGGGGACATCGCACTCCTGTATCTCCAAGAGATAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000557766.1
CDS CCA 72 bp TTCTGGAGAGTTGCCTGTCTCGGGATCGCTGAAGTCTaGCAAAGTAATTGTATTAAGCTGTCGTCTGTCAGC +
Preference number: 6 (lower is better)
Translates to: FWRVACLGIAEV*QSNCIKLSSVS
Trigger: GCTGACAGACGACAGCTTAATACAATTACTTTGCCAGACTTCAGCGATCCCGAGACAGGCAACTCTCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553972.5
ENST00000554654.5
CDS CCA 72 bp ATGGCTCTTTCTAGGCACTCTGACAGCATCTCATACTaGCCTCTTCTTCCAAGAGCAATGGTGAGTAAGTCA +
Preference number: 6 (lower is better)
Translates to: MALSRHSDSISY*PLLPRAMVSKS
Trigger: TGACTTACTCACCATTGCTCTTGGAAGAAGAGGCCAGTATGAGATGCTGTCAGAGTGCCTAGAAAGAGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328459.11
ENST00000554462.1
ENST00000555005.5
CDS CCA 72 bp TGCCATAAGCTAAAGGCTCAGGTCATTCAAATGCACTaGATCCCCATATCCACCAGCATTTCCCCAAATGCA +
Preference number: 6 (lower is better)
Translates to: CHKLKAQVIQMH*IPISTSISPNA
Trigger: TGCATTTGGGGAAATGCTGGTGGATATGGGGATCCAGTGCATTTGAATGACCTGAGCCTTTAGCTTATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555005.5
CDS CCA 72 bp TACACTCTTTCAGCACCTTCACGGCACGGGCAGACTTaGCAAGAGAAGATTATTTCCGTGAAACTCAAAGTG +
Preference number: 6 (lower is better)
Translates to: YTLSAPSRHGQT*QEKIISVKLKV
Trigger: CACTTTGAGTTTCACGGAAATAATCTTCTCTTGCCAAGTCTGCCCGTGCCGTGAAGGTGCTGAAAGAGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556749.1
CDS CAA 72 bp ATACACTCTTTCAGCACCTTCACGGCACGGGCAGACTaGGCAAGAGAAGATTATTTCCGTGAAACTCAAAGT +
Preference number: 6 (lower is better)
Translates to: IHSFSTFTARAD*AREDYFRETQS
Trigger: ACTTTGAGTTTCACGGAAATAATCTTCTCTTGCCAAGTCTGCCCGTGCCGTGAAGGTGCTGAAAGAGTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556749.1
CDS TCA 72 bp GGCACGGGCAGACTTGGCAAGAGAAGATTATTTCCGTaGAACTCAAAGTGTTTGACAGAACCGAATACTACA +
Preference number: 6 (lower is better)
Translates to: GTGRLGKRRLFP*NSKCLTEPNTT
Trigger: TGTAGTATTCGGTTCTGTCAAACACTTTGAGTTTCACGGAAATAATCTTCTCTTGCCAAGTCTGCCCGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556749.1
CDS GCA 72 bp AAGTATTACCCTTTCTATCTCTTGGAGATACAGGAGTaGGATGTCCCCTGCTTTCTCATAACAGGTGATGAC +
Preference number: 6 (lower is better)
Translates to: KYYPFYLLEIQE*DVPCFLITGDD
Trigger: GTCATCACCTGTTATGAGAAAGCAGGGGACATCGCACTCCTGTATCTCCAAGAGATAGAAAGGGTAATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328459.11
ENST00000557766.1
CDS TCA 72 bp GCAAGAGAAGATTATTTCCGTGAAACTCAAAGTGTTTaGCAGAACCGAATACTACAGCCTTCTCAGAGGGGT +
Preference number: 6 (lower is better)
Translates to: AREDYFRETQSV*QNRILQPSQRG
Trigger: ACCCCTCTGAGAAGGCTGTAGTATTCGGTTCTGTCAAACACTTTGAGTTTCACGGAAATAATCTTCTCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556749.1
CDS TCA 72 bp GGATCTTTCCAAACTACAACCCAAAATAAGTTGATCTaGGAAACAAATTGCAATGCCGCATGCAAAGCAGAT +
Preference number: 6 (lower is better)
Translates to: GSFQTTTQNKLI*ETNCNAACKAD
Trigger: ATCTGCTTTGCATGCGGCATTGCAATTTGTTTCTCAGATCAACTTATTTTGGGTTGTAGTTTGGAAAGATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554654.5
CDS TCA 72 bp CTTTATAATCACCTTCCACATAATTCAACTTGGCCATaGTCAGATTGGATTCTTGTAGGAATTCTTAAGGTT +
Preference number: 6 (lower is better)
Translates to: LYNHLPHNSTWP*SDWILVGILKV
Trigger: AACCTTAAGAATTCCTACAAGAATCCAATCTGATCATGGCCAAGTTGAATTATGTGGAAGGTGATTATAAAG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553948.1