RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTC7A (Homo sapiens)

Ensembl gene IDs: ENSG00000068724

Ensembl transcript IDs: ENST00000319190.11, ENST00000394850.6, ENST00000409245.5, ENST00000409825.5, ENST00000440051.1, ENST00000441914.5, ENST00000461601.5, ENST00000474321.6, ENST00000484061.5, ENST00000484337.5, ENST00000491786.5, ENST00000496991.3, ENST00000651101.1, ENST00000652568.1

Found 974 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCGAAGGGACCCGATGCAGACCTTCGCGGCCATCAGGGGCACGGTaGGGTCCGAGGGCCGCAACTTCACACACTCCCGCAGCAGGGACA +
Preference number: 1 (lower is better)
Translates to: SEGTRCRPSRPSGAR*GPRAATSHTPAAGT
Trigger: TGTCCCTGCTGCGGGAGTGTGTGAAGTTGCGGCCCTCGGACCCCACCGTGCCCCTGATGGCCGCGAAGGTCTGCATCGGGTCCCTTCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR TCA 90 bp CTGCATGGGGCCCTGCTTCAGGACCGAAGAGGGCATAGTCAGCTCTaGCATGGCCTCCTCCAGCCGGGAGGCGGCGATGGACGAAGCCCG +
Preference number: 1 (lower is better)
Translates to: LHGALLQDRRGHSQL*HGLLQPGGGDGRSP
Trigger: CGGGCTTCGTCCATCGCCGCCTCCCGGCTGGAGGAGGCCATGTCAGAGCTGACTATGCCCTCTTCGGTCCTGAAGCAGGGCCCCATGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR GCA 90 bp ATGCGCACGCCATCTGGGTTCACCGTGAGCGCCTCCTTGTACAGCTaGTTGGCCTCCTCCAGGTTGCCCTTCACCTCAGCCAGCCGGCCC +
Preference number: 1 (lower is better)
Translates to: MRTPSGFTVSASLYS*LASSRLPFTSASRP
Trigger: GGGCCGGCTGGCTGAGGTGAAGGGCAACCTGGAGGAGGCCAAGCAGCTGTACAAGGAGGCGCTCACGGTGAACCCAGATGGCGTGCGCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR CCA 90 bp CTTCCTCCTCCCTCTCTGTCAGGCGGAAGCGGGAGGCGATGGAGTTaGGTAGGCGTTCCAGAGAGAGGCCTCCCCTGCAGGACCTCTGAC +
Preference number: 1 (lower is better)
Translates to: LPPPSLSGGSGRRWS*VGVPERGLPCRTSD
Trigger: GTCAGAGGTCCTGCAGGGGAGGCCTCTCTCTGGAACGCCTACCCAACTCCATCGCCTCCCGCTTCCGCCTGACAGAGAGGGAGGAGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR GCA 90 bp CCTTTCCCACATCCCTCCCCAGGTGGGCCCAGGTCTTGGCTTCGATaGCTTCTCTGGCCTCCCTCATCCTGCAACAGCCCCTCCTGTCCA +
Preference number: 1 (lower is better)
Translates to: PFPHPSPGGPRSWLR*LLWPPSSCNSPSCP
Trigger: TGGACAGGAGGGGCTGTTGCAGGATGAGGGAGGCCAGAGAAGGCATCGAAGCCAAGACCTGGGCCCACCTGGGGAGGGATGTGGGAAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR CCA 90 bp CTACGGAGGCTGCTTGGGCTGGAGCACATCGCCAGGGAGATGGGGTaGGTGGAGATGGAAGTGTTAGGGCCGGTGCTCAGTACCCCTGGT +
Preference number: 1 (lower is better)
Translates to: LRRLLGLEHIAREMG*VEMEVLGPVLSTPG
Trigger: ACCAGGGGTACTGAGCACCGGCCCTAACACTTCCATCTCCACCCACCCCATCTCCCTGGCGATGTGCTCCAGCCCAAGCAGCCTCCGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR CCA 90 bp GCATGCTGGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGGTaGAGGGCGTGGGCATCATCCTTGCGTACCTTCAGGGCCTCCTGC +
Preference number: 1 (lower is better)
Translates to: ACWWCFWAEKSSASR*RAWASSLRTFRASC
Trigger: GCAGGAGGCCCTGAAGGTACGCAAGGATGATGCCCACGCCCTCCACCTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
3UTR TCA 90 bp GAAGGTGGCCCATCAGCAATGCCCGAGGGGATCTCTGTTCAGACGTaGGTCCTGCCTTGGCCTCTCCCAGCAATGCCCAGAGGCAGCAGG +
Preference number: 1 (lower is better)
Translates to: EGGPSAMPEGISVQT*VLPWPLPAMPRGSR
Trigger: CCTGCTGCCTCTGGGCATTGCTGGGAGAGGCCAAGGCAGGACTCACGTCTGAACAGAGATCCCCTCGGGCATTGCTGATGGGCCACCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR GCA 90 bp GCCCATCAGCAATGCCCGAGGGGATCTCTGTTCAGACGTGAGTCCTaGCTTGGCCTCTCCCAGCAATGCCCAGAGGCAGCAGGGGCTTCA +
Preference number: 1 (lower is better)
Translates to: AHQQCPRGSLFRRES*LGLSQQCPEAAGAS
Trigger: TGAAGCCCCTGCTGCCTCTGGGCATTGCTGGGAGAGGCCAAGGCAGGACTCACGTCTGAACAGAGATCCCCTCGGGCATTGCTGATGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR CCA 90 bp GGGTGCTCGGTGATGGCCATGTTGACAACATCCAGGGCATGCTGGTaGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGGTGGAGGGCG +
Preference number: 1 (lower is better)
Translates to: GCSVMAMLTTSRACW*CFWAEKSSASRWRA
Trigger: CGCCCTCCACCTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCTGGATGTTGTCAACATGGCCATCACCGAGCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
3UTR CCA 90 bp TCGTGGCACGTACTCTGCCTCTCCACGGCATCACGAAGCACCTTCTaGGCCAAGCTCTTGTGGCCCAGCCGACTCAGCATCAGACCCAGG +
Preference number: 1 (lower is better)
Translates to: SWHVLCLSTASRSTF*AKLLWPSRLSIRPR
Trigger: CCTGGGTCTGATGCTGAGTCGGCTGGGCCACAAGAGCTTGGCCCAGAAGGTGCTTCGTGATGCCGTGGAGAGGCAGAGTACGTGCCACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR TCA 90 bp CCTGCAGGAACACCTGAGCGATCCAGGAGGCCCTCTCAAAACAGGTaGTCACTTCCTCCTCCCTCTCTGTCAGGCGGAAGCGGGAGGCGA +
Preference number: 1 (lower is better)
Translates to: PAGTPERSRRPSQNR*SLPPPSLSGGSGRR
Trigger: TCGCCTCCCGCTTCCGCCTGACAGAGAGGGAGGAGGAAGTGATCACCTGTTTTGAGAGGGCCTCCTGGATCGCTCAGGTGTTCCTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR GCA 90 bp CTGTCCCCTTCTGCCCAACGTGATGCTCAGGAGGTCATAGATGGCTaGGGCATTCTGCAAGCTCACTGTCCGGTCCTCCTCCTGCTCCGG +
Preference number: 1 (lower is better)
Translates to: LSPSAQRDAQEVIDG*GILQAHCPVLLLLR
Trigger: CCGGAGCAGGAGGAGGACCGGACAGTGAGCTTGCAGAATGCCGCAGCCATCTATGACCTCCTGAGCATCACGTTGGGCAGAAGGGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR GCA 90 bp GCTGGGAGAAGCTGTACAGGGTCTGCCACAGCCTCAGCACTTGTCTaGAGGTCACGAGGGCTTCCTCTGGGCCTTTCAGCACCTGCTCCA +
Preference number: 1 (lower is better)
Translates to: AGRSCTGSATASALV*RSRGLPLGLSAPAP
Trigger: TGGAGCAGGTGCTGAAAGGCCCAGAGGAAGCCCTCGTGACCTGCAGACAAGTGCTGAGGCTGTGGCAGACCCTGTACAGCTTCTCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR CCA 90 bp TCACCTCAGCCAGCCGGCCCCGCATATAGAGTACTGAGTGAGAAGTaGGGAAGAGGCCCGCCGCCTCCTGGATGCAGAAACCTGCTTCCT +
Preference number: 1 (lower is better)
Translates to: SPQPAGPAYRVLSEK*GRGPPPPGCRNLLP
Trigger: AGGAAGCAGGTTTCTGCATCCAGGAGGCGGCGGGCCTCTTCCCCACTTCTCACTCAGTACTCTATATGCGGGGCCGGCTGGCTGAGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR CCA 90 bp CCGACTCAGCATCAGACCCAGGCTATGCATGATGCGCACGCCATCTaGGTTCACCGTGAGCGCCTCCTTGTACAGCTGCTTGGCCTCCTC +
Preference number: 1 (lower is better)
Translates to: PTQHQTQAMHDAHAI*VHRERLLVQLLGLL
Trigger: GAGGAGGCCAAGCAGCTGTACAAGGAGGCGCTCACGGTGAACCCAGATGGCGTGCGCATCATGCATAGCCTGGGTCTGATGCTGAGTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR CCA 90 bp TGCCTCTCCACGGCATCACGAAGCACCTTCTGGGCCAAGCTCTTGTaGCCCAGCCGACTCAGCATCAGACCCAGGCTATGCATGATGCGC +
Preference number: 1 (lower is better)
Translates to: CLSTASRSTFWAKLL*PSRLSIRPRLCMMR
Trigger: GCGCATCATGCATAGCCTGGGTCTGATGCTGAGTCGGCTGGGCCACAAGAGCTTGGCCCAGAAGGTGCTTCGTGATGCCGTGGAGAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR GCA 90 bp CGCCGGGAGCCAGAGTCTGCATCATGGGCATCAGGCAAAGTCAGGTaGATGCCACTCTGCTTCTTCATGGTGAGGCCCTCACCGAAGCTG +
Preference number: 1 (lower is better)
Translates to: RREPESASWASGKVR*MPLCFFMVRPSPKL
Trigger: CAGCTTCGGTGAGGGCCTCACCATGAAGAAGCAGAGTGGCATGCACCTGACTTTGCCTGATGCCCATGATGCAGACTCTGGCTCCCGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR GCA 90 bp AAGAGGCCCGCCGCCTCCTGGATGCAGAAACCTGCTTCCTTGAGGTaGTGCTGCTCCATGAACAGCTCAGCAGCCTGCAGCCAGATCTGT +
Preference number: 1 (lower is better)
Translates to: KRPAASWMQKPASLR*CCSMNSSAACSQIC
Trigger: ACAGATCTGGCTGCAGGCTGCTGAGCTGTTCATGGAGCAGCAGCACCTCAAGGAAGCAGGTTTCTGCATCCAGGAGGCGGCGGGCCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR CCA 90 bp TCAGGGTGCTCGGTGATGGCCATGTTGACAACATCCAGGGCATGCTaGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGGTGGAGG +
Preference number: 1 (lower is better)
Translates to: SGCSVMAMLTTSRAC*WCFWAEKSSASRWR
Trigger: CCTCCACCTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCTGGATGTTGTCAACATGGCCATCACCGAGCACCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
3UTR GCA 90 bp TTCTCAGGGTGCTCGGTGATGGCCATGTTGACAACATCCAGGGCATaGTGGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGGTGG +
Preference number: 1 (lower is better)
Translates to: FSGCSVMAMLTTSRA*WWCFWAEKSSASRW
Trigger: CCACCTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCTGGATGTTGTCAACATGGCCATCACCGAGCACCCTGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
3UTR GCA 90 bp CCATCCTTTTCTAGGCCTCCCAGCTGGGAGAAGCTGTACAGGGTCTaGCACAGCCTCAGCACTTGTCTGCAGGTCACGAGGGCTTCCTCT +
Preference number: 1 (lower is better)
Translates to: PSFSRPPSWEKLYRV*HSLSTCLQVTRASS
Trigger: AGAGGAAGCCCTCGTGACCTGCAGACAAGTGCTGAGGCTGTGGCAGACCCTGTACAGCTTCTCCCAGCTGGGAGGCCTAGAAAAGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR CCA 90 bp CTGCCACAGCCTCAGCACTTGTCTGCAGGTCACGAGGGCTTCCTCTaGGCCTTTCAGCACCTGCTCCAGCTTCACCTTGGTGAACATCAG +
Preference number: 1 (lower is better)
Translates to: LPQPQHLSAGHEGFL*AFQHLLQLHLGEHQ
Trigger: CTGATGTTCACCAAGGTGAAGCTGGAGCAGGTGCTGAAAGGCCCAGAGGAAGCCCTCGTGACCTGCAGACAAGTGCTGAGGCTGTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR TCA 90 bp TGTCCAGGGCCTGGCTCAAGGCTGGTGTGGGAGCTACATGCCCAGTaGATATACATGCTGCTTCAGACAAGCCTGCTTCCCCTCCAAGGG +
Preference number: 1 (lower is better)
Translates to: CPGPGSRLVWELHAQ*IYMLLQTSLLPLQG
Trigger: CCCTTGGAGGGGAAGCAGGCTTGTCTGAAGCAGCATGTATATTCACTGGGCATGTAGCTCCCACACCAGCCTTGAGCCAGGCCCTGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR TCA 90 bp GTCATCAATCCCGGCCCGTGCGTACATGCTGATGGCATCTCGGTATaGGCCCTCCACGTAATGCAGTTTGCCCAGGATCAGCATGGCCTC +
Preference number: 1 (lower is better)
Translates to: VINPGPCVHADGISV*ALHVMQFAQDQHGL
Trigger: GAGGCCATGCTGATCCTGGGCAAACTGCATTACGTGGAGGGCTCATACCGAGATGCCATCAGCATGTACGCACGGGCCGGGATTGATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR TCA 90 bp GGGCATCAGGCAAAGTCAGGTGCATGCCACTCTGCTTCTTCATGGTaGGGCCCTCACCGAAGCTGCCATCCTTTTCTAGGCCTCCCAGCT +
Preference number: 1 (lower is better)
Translates to: GHQAKSGACHSASSW*GPHRSCHPFLGLPA
Trigger: AGCTGGGAGGCCTAGAAAAGGATGGCAGCTTCGGTGAGGGCCTCACCATGAAGAAGCAGAGTGGCATGCACCTGACTTTGCCTGATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR GCA 90 bp AAAGGACTGGATCTAGCAACCACAGGATCTAAAGCCTACGGAGGCTaGTTGGGCTGGAGCACATCGCCAGGGAGATGGGGTGGGTGGAGA +
Preference number: 1 (lower is better)
Translates to: KGLDLATTGSKAYGG*LGWSTSPGRWGGWR
Trigger: TCTCCACCCACCCCATCTCCCTGGCGATGTGCTCCAGCCCAAGCAGCCTCCGTAGGCTTTAGATCCTGTGGTTGCTAGATCCAGTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR TCA 90 bp CGGAGGCATGCTTTGATGACAAAAGCCTCCGACAGCAGCCGCATCTaGTACAGGGGCTTGTTCTCCATGGACATGTCATCAATCCCGGCC +
Preference number: 1 (lower is better)
Translates to: RRHALMTKASDSSRI*YRGLFSMDMSSIPA
Trigger: GGCCGGGATTGATGACATGTCCATGGAGAACAAGCCCCTGTATCAGATGCGGCTGCTGTCGGAGGCTTTTGTCATCAAAGCATGCCTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR GCA 90 bp AAAGGGCTGTGGGTGGTGAGATGTACTGGGGACAGTCCTAGAAACTaGCTACCTCCATGTTGGTGGCCCTCAAGGGACCTGCATTGTAGC +
Preference number: 1 (lower is better)
Translates to: KGLWVVRCTGDSPRN*LPPCWWPSRDLHCS
Trigger: GCTACAATGCAGGTCCCTTGAGGGCCACCAACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCTCACCACCCACAGCCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR TCA 90 bp TGTTCTCCATGGACATGTCATCAATCCCGGCCCGTGCGTACATGCTaGTGGCATCTCGGTATGAGCCCTCCACGTAATGCAGTTTGCCCA +
Preference number: 1 (lower is better)
Translates to: CSPWTCHQSRPVRTC*WHLGMSPPRNAVCP
Trigger: TGGGCAAACTGCATTACGTGGAGGGCTCATACCGAGATGCCATCAGCATGTACGCACGGGCCGGGATTGATGACATGTCCATGGAGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR GCA 90 bp GAGTCTGCATCATGGGCATCAGGCAAAGTCAGGTGCATGCCACTCTaGTTCTTCATGGTGAGGCCCTCACCGAAGCTGCCATCCTTTTCT +
Preference number: 1 (lower is better)
Translates to: ESASWASGKVRCMPL*FFMVRPSPKLPSFS
Trigger: AGAAAAGGATGGCAGCTTCGGTGAGGGCCTCACCATGAAGAAGCAGAGTGGCATGCACCTGACTTTGCCTGATGCCCATGATGCAGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR CCA 90 bp GTGAGATGTACTGGGGACAGTCCTAGAAACTGCCTACCTCCATGTTaGTGGCCCTCAAGGGACCTGCATTGTAGCCTAAGACCTGCAGGA +
Preference number: 1 (lower is better)
Translates to: VRCTGDSPRNCLPPC*WPSRDLHCSLRPAG
Trigger: TCCTGCAGGTCTTAGGCTACAATGCAGGTCCCTTGAGGGCCACCAACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR CCA 90 bp AGATGTACTGGGGACAGTCCTAGAAACTGCCTACCTCCATGTTGGTaGCCCTCAAGGGACCTGCATTGTAGCCTAAGACCTGCAGGAGTA +
Preference number: 1 (lower is better)
Translates to: RCTGDSPRNCLPPCW*PSRDLHCSLRPAGV
Trigger: TACTCCTGCAGGTCTTAGGCTACAATGCAGGTCCCTTGAGGGCCACCAACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR TCA 90 bp GACGTGCTGTTATTTGTGGTCTTCTCCAATTCCTGCAGGAACACCTaGGCGATCCAGGAGGCCCTCTCAAAACAGGTGATCACTTCCTCC +
Preference number: 1 (lower is better)
Translates to: DVLLFVVFSNSCRNT*AIQEALSKQVITSS
Trigger: GGAGGAAGTGATCACCTGTTTTGAGAGGGCCTCCTGGATCGCTCAGGTGTTCCTGCAGGAATTGGAGAAGACCACAAATAACAGCACGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR GCA 90 bp CTGGCTCAAGGCTGGTGTGGGAGCTACATGCCCAGTGAATATACATaGTGCTTCAGACAAGCCTGCTTCCCCTCCAAGGGTTTCTTTATT +
Preference number: 1 (lower is better)
Translates to: LAQGWCGSYMPSEYT*CFRQACFPSKGFFI
Trigger: AATAAAGAAACCCTTGGAGGGGAAGCAGGCTTGTCTGAAGCAGCATGTATATTCACTGGGCATGTAGCTCCCACACCAGCCTTGAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR TCA 90 bp AGAAATCTCATAGTCTTCCCACTTGCCCGCAGTTTCTTCACATTGTaGCCGCCCTGGGCAAGACCTGAGAGAGATCCAGAAGTCTGTACT +
Preference number: 1 (lower is better)
Translates to: RNLIVFPLARSFFTL*PPWARPERDPEVCT
Trigger: AGTACAGACTTCTGGATCTCTCTCAGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACTGCGGGCAAGTGGGAAGACTATGAGATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR GCA 90 bp GCTCAAGGCTGGTGTGGGAGCTACATGCCCAGTGAATATACATGCTaGTTCAGACAAGCCTGCTTCCCCTCCAAGGGTTTCTTTATTCAA +
Preference number: 1 (lower is better)
Translates to: AQGWCGSYMPSEYTC*FRQACFPSKGFFIQ
Trigger: TTGAATAAAGAAACCCTTGGAGGGGAAGCAGGCTTGTCTGAAGCAGCATGTATATTCACTGGGCATGTAGCTCCCACACCAGCCTTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR GCA 90 bp GGGAGCTACATGCCCAGTGAATATACATGCTGCTTCAGACAAGCCTaGTTCCCCTCCAAGGGTTTCTTTATTCAACCTGCAAAGTCACTG +
Preference number: 1 (lower is better)
Translates to: GSYMPSEYTCCFRQA*FPSKGFFIQPAKSL
Trigger: CAGTGACTTTGCAGGTTGAATAAAGAAACCCTTGGAGGGGAAGCAGGCTTGTCTGAAGCAGCATGTATATTCACTGGGCATGTAGCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR TCA 90 bp TCAAGGGACCTGCATTGTAGCCTAAGACCTGCAGGAGTAATGTGTTaGCTCAGGGTATTAGAAAGGACTGGATCTAGCAACCACAGGATC +
Preference number: 1 (lower is better)
Translates to: SRDLHCSLRPAGVMC*LRVLERTGSSNHRI
Trigger: GATCCTGTGGTTGCTAGATCCAGTCCTTTCTAATACCCTGAGTCAACACATTACTCCTGCAGGTCTTAGGCTACAATGCAGGTCCCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR CCA 90 bp TATCCACAGTACGTTGGTATGTGGCATAACTTATTAGGGGTGTACTaGTATGGACTTCTCAGCAGAGGTGGCCAATCTGAACAAGGCCCA +
Preference number: 1 (lower is better)
Translates to: YPQYVGMWHNLLGVY*YGLLSRGGQSEQGP
Trigger: TGGGCCTTGTTCAGATTGGCCACCTCTGCTGAGAAGTCCATACCAGTACACCCCTAATAAGTTATGCCACATACCAACGTACTGTGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR CCA 90 bp CTCGGTATGAGCCCTCCACGTAATGCAGTTTGCCCAGGATCAGCATaGCCTCACACATGTACTGTGGTTTGGAATAGCTCTTTAAAAATC +
Preference number: 1 (lower is better)
Translates to: LGMSPPRNAVCPGSA*PHTCTVVWNSSLKI
Trigger: GATTTTTAAAGAGCTATTCCAAACCACAGTACATGTGTGAGGCCATGCTGATCCTGGGCAAACTGCATTACGTGGAGGGCTCATACCGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR GCA 90 bp CTCCTCCAGCCGGGAGGCGGCGATGGACGAAGCCCGCCGGGAGCCAGAGTCTGCCTGACCCACGTTCCCTaGTGCCTCTCCCTCTGGCCA +
Preference number: 2 (lower is better)
Translates to: LLQPGGGDGRSPPGARVCLTHVP*CLSLWP
Trigger: TGGCCAGAGGGAGAGGCAGCAGGGAACGTGGGTCAG...GCAGACTCTGGCTCCCGGCGGGCTTCGTCCATCGCCGCCTCCCGGCTGGAGGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR TCA 90 bp ACCCGATGCAGACCTTCGCGGCCATCAGGGGCACGGTGGGGTCCGAGGGCCGCACCCTTCTGCCCAACGTaGTGCTCAGGAGGTCATAGA +
Preference number: 2 (lower is better)
Translates to: TRCRPSRPSGARWGPRAAPFCPT*CSGGHR
Trigger: TCTATGACCTCCTGAGCATCACGTTGGGCAGAAGGG...TGCGGCCCTCGGACCCCACCGTGCCCCTGATGGCCGCGAAGGTCTGCATCGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR CCA 90 bp GAAGGGACCCGATGCAGACCTTCGCGGCCATCAGGGGCACGGTGGGGTCCGAGGTCCGCAGGGCCTGAGTaGCGAAAGAACTCTCCTCCT +
Preference number: 2 (lower is better)
Translates to: EGTRCRPSRPSGARWGPRSAGPE*RKNSPP
Trigger: AGGAGGAGAGTTCTTTCGCCACTCAGGCCCTGCGGA...CCTCGGACCCCACCGTGCCCCTGATGGCCGCGAAGGTCTGCATCGGGTCCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR TCA 90 bp CTGCAGGCTATAGGTGAGACCCAGAGCCAGGTAGCCCTTGGGGAGGAACTCCCCCCCCTGCAGGACCTCTaGCCACCGGGACTGTGTTCC +
Preference number: 2 (lower is better)
Translates to: LQAIGETQSQVALGEELPPLQDL*PPGLCS
Trigger: GGAACACAGTCCCGGTGGTCAGAGGTCCTGCAGGGG...GGGGAGTTCCTCCCCAAGGGCTACCTGGCTCTGGGTCTCACCTATAGCCTGCAG
64% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR GCA 90 bp CCTCGTGGCACGTACTCTGCCTCTCCACGGCATCACGAAGCACCTTCTGGGCCATCCTCACTCAGGGAGTaGAGCAGGACCCCCGCCAGG +
Preference number: 2 (lower is better)
Translates to: PRGTYSASPRHHEAPSGPSSLRE*SRTPAR
Trigger: CCTGGCGGGGGTCCTGCTGCACTCCCTGAGTGAGGA...TGGCCCAGAAGGTGCTTCGTGATGCCGTGGAGAGGCAGAGTACGTGCCACGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR GCA 90 bp AGAAATCCAGGAAGGCCCTCTTGGCCCAGCCAAGAGAACGAGGGCTGCAGCTGCACCTCGCCCAGGCCCTaGCACGCCTCGTGGCACGTA +
Preference number: 2 (lower is better)
Translates to: RNPGRPSWPSQENEGCSCTSPRP*HASWHV
Trigger: TACGTGCCACGAGGCGTGGCAGGGCCTGGGCGAGGT...GCAGCTGCAGCCCTCGTTCTCTTGGCTGGGCCAAGAGGGCCTTCCTGGATTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR CCA 90 bp GCCGGCCCCGCATATAGAGTACTGAGTGAGAAGTGGGGAAGAGGCCCGCCGCCTCTTCAGGGGTCGCCCTaGACAGGTCAGAGGCCAGGA +
Preference number: 2 (lower is better)
Translates to: AGPAYRVLSEKWGRGPPPLQGSP*TGQRPG
Trigger: TCCTGGCCTCTGACCTGTCCAGGGCGACCCCTGAAG...AGGCGGCGGGCCTCTTCCCCACTTCTCACTCAGTACTCTATATGCGGGGCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR CAA 90 bp GCAGAGAAGAGCAGTGCCAGCAGGTGGAGGGCGTGGGCATCATCCTaGCGTACCTTCAGGGCCTCCTGCAGCTGCTCCATGGCACTGGAG +
Preference number: 2 (lower is better)
Translates to: AEKSSASRWRAWASS*RTFRASCSCSMALE
Trigger: CTCCAGTGCCATGGAGCAGCTGCAGGAGGCCCTGAAGGTACGCAAGGATGATGCCCACGCCCTCCACCTGCTGGCACTGCTCTTCTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
3UTR CAA 90 bp ATCAGCAATGCCCGAGGGGATCTCTGTTCAGACGTGAGTCCTGCCTaGGCCTCTCCCAGCAATGCCCAGAGGCAGCAGGGGCTTCAGGGG +
Preference number: 2 (lower is better)
Translates to: ISNARGDLCSDVSPA*ASPSNAQRQQGLQG
Trigger: CCCCTGAAGCCCCTGCTGCCTCTGGGCATTGCTGGGAGAGGCCAAGGCAGGACTCACGTCTGAACAGAGATCCCCTCGGGCATTGCTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR-3UTR TCA 90 bp AAAGAAATCCAGGAAGGCCCTCTTGGCCCAGCCAAGAGAACGAGGGCTGCAGCTCTGAGGCCCCGCACCTaGTGCCACTGTTGCCCCACC +
Preference number: 2 (lower is better)
Translates to: KEIQEGPLGPAKRTRAAALRPRT*CHCCPT
Trigger: GGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAG...AGCTGCAGCCCTCGTTCTCTTGGCTGGGCCAAGAGGGCCTTCCTGGATTTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR-3UTR GCA 90 bp AAGGTGGCCCATCAGCAATGCCCGAGGGGATCTCTGTTCAGACGTGAGTCCTGCACCCACGTTCCCTGCTaGCTCTCCCTCTGGCCAGCC +
Preference number: 2 (lower is better)
Translates to: KVAHQQCPRGSLFRRESCTHVPC*LSLWPA
Trigger: GGCTGGCCAGAGGGAGAGGCAGCAGGGAACGTGGGT...GCAGGACTCACGTCTGAACAGAGATCCCCTCGGGCATTGCTGATGGGCCACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR-3UTR GCA 90 bp AAGGTGGCCCATCAGCAATGCCCGAGGGGATCTCTGTTCAGACGTGAGTCCTGCGGCCAGGATCAGCCCTaGCTGGACCCCTCTTGCCTC +
Preference number: 2 (lower is better)
Translates to: KVAHQQCPRGSLFRRESCGQDQP*LDPSCL
Trigger: GAGGCAAGAGGGGTCCAGGCAGGGCTGATCCTGGCC...GCAGGACTCACGTCTGAACAGAGATCCCCTCGGGCATTGCTGATGGGCCACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR-3UTR GCA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTACCCACGTTCCCTGCTaGCTCTCCCTCTGGCCAGCC +
Preference number: 2 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPTHVPC*LSLWPA
Trigger: GGCTGGCCAGAGGGAGAGGCAGCAGGGAACGTGGGT...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
3UTR-3UTR GCA 90 bp GCCGGCCCCGCATATAGAGTACTGAGTGAGAAGTGGGGAAGAGGCCCGCCGCCTAGGTGCATGCCACTCTaGTTCTTCATGGTGAGGCCC +
Preference number: 2 (lower is better)
Translates to: AGPAYRVLSEKWGRGPPPRCMPL*FFMVRP
Trigger: GGGCCTCACCATGAAGAAGCAGAGTGGCATGCACCT...AGGCGGCGGGCCTCTTCCCCACTTCTCACTCAGTACTCTATATGCGGGGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR-3UTR CCA 90 bp ATGGGGCCCTGCTTCAGGACCGAAGAGGGCATAGTCAGCTCTGACATGGCCTCCAGCAGGTGGAGGGCGTaGGCATCATCCTTGCGTACC +
Preference number: 2 (lower is better)
Translates to: MGPCFRTEEGIVSSDMASSRWRA*ASSLRT
Trigger: GGTACGCAAGGATGATGCCCACGCCCTCCACCTGCT...GGAGGCCATGTCAGAGCTGACTATGCCCTCTTCGGTCCTGAAGCAGGGCCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR CAA 90 bp GGACTGGATCTAGCAACCACAGGATCTAAAGCCTACGGAGGCTGCTaGGGCTGGAGCACATCGCCAGGGAGATGGGGTGGGTGGAGATGG +
Preference number: 2 (lower is better)
Translates to: GLDLATTGSKAYGGC*GWSTSPGRWGGWRW
Trigger: CCATCTCCACCCACCCCATCTCCCTGGCGATGTGCTCCAGCCCAAGCAGCCTCCGTAGGCTTTAGATCCTGTGGTTGCTAGATCCAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR CAA 90 bp CTCTGCCTCTCCACGGCATCACGAAGCACCTTCTGGGCCAAGCTCTaGTGGCCCAGCCGACTCAGCATCAGACCCAGGCTATGCATGATG +
Preference number: 2 (lower is better)
Translates to: LCLSTASRSTFWAKL*WPSRLSIRPRLCMM
Trigger: CATCATGCATAGCCTGGGTCTGATGCTGAGTCGGCTGGGCCACAAGAGCTTGGCCCAGAAGGTGCTTCGTGATGCCGTGGAGAGGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR-3UTR TCA 90 bp TGGGCAAGACCTGAGAGAGATCCAGAAGTCTGTACTGTGCTGAGAGTGGGGAGTGGTGAAGGACAGCTGTaGGGCTCCCCGCTGCCCAGC +
Preference number: 2 (lower is better)
Translates to: WARPERDPEVCTVLRVGSGEGQL*GSPLPS
Trigger: GCTGGGCAGCGGGGAGCCTCACAGCTGTCCTTCACC...ACTCCCCACTCTCAGCACAGTACAGACTTCTGGATCTCTCTCAGGTCTTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR-3UTR GCA 90 bp CAGCATCAGACCCAGGCTATGCATGATGCGCACGCCATCTGGGTTCACCGTGAGTGGCCTCCCTCATCCTaGAACAGCCCCTCCTGTCCA +
Preference number: 2 (lower is better)
Translates to: QHQTQAMHDAHAIWVHREWPPSS*NSPSCP
Trigger: TGGACAGGAGGGGCTGTTGCAGGATGAGGGAGGCCA...CTCACGGTGAACCCAGATGGCGTGCGCATCATGCATAGCCTGGGTCTGATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR GCA 90 bp GCCGGCCCCGCATATAGAGTACTGAGTGAGAAGTGGGGAAGAGGCCCGCCGCCTCCACGTAATGCAGTTTaGCCAGGATCAGCATGGCCT +
Preference number: 2 (lower is better)
Translates to: AGPAYRVLSEKWGRGPPPPRNAV*PGSAWP
Trigger: AGGCCATGCTGATCCTGGGCAAACTGCATTACGTGG...AGGCGGCGGGCCTCTTCCCCACTTCTCACTCAGTACTCTATATGCGGGGCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR GCA 90 bp GCTATGCATGATGCGCACGCCATCTGGGTTCACCGTGAGCGCCTCCTTGTACAGGCCCTCTCCAGCGTCTaGAGTGCCTTCCGGTGCAAT +
Preference number: 2 (lower is better)
Translates to: AMHDAHAIWVHRERLLVQALSSV*SAFRCN
Trigger: ATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGC...CTGTACAAGGAGGCGCTCACGGTGAACCCAGATGGCGTGCGCATCATGCATAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR-3UTR CCA 90 bp AGAAATCCAGGAAGGCCCTCTTGGCCCAGCCAAGAGAACGAGGGCTGCAGCTGCGGTGCTCAGTACCCCTaGTCAGACCCCAAAGGCACT +
Preference number: 2 (lower is better)
Translates to: RNPGRPSWPSQENEGCSCGAQYP*SDPKGT
Trigger: AGTGCCTTTGGGGTCTGACCAGGGGTACTGAGCACC...GCAGCTGCAGCCCTCGTTCTCTTGGCTGGGCCAAGAGGGCCTTCCTGGATTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR-3UTR CCA 90 bp AGCATCAGACCCAGGCTATGCATGATGCGCACGCCATCTGGGTTCACCGTGAGCGTACTGAGTGAGAAGTaGGGAAGAGGCCCGCCGCCT +
Preference number: 2 (lower is better)
Translates to: SIRPRLCMMRTPSGFTVSVLSEK*GRGPPP
Trigger: AGGCGGCGGGCCTCTTCCCCACTTCTCACTCAGTAC...GCTCACGGTGAACCCAGATGGCGTGCGCATCATGCATAGCCTGGGTCTGATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR-3UTR TCA 90 bp CTGTGGGTGGTGAGATGTACTGGGGACAGTCCTAGAAACTGCCTACCTCCATGTACTGTTGCCCCACCCTaGCCCACGTTCCCTGCTGCC +
Preference number: 2 (lower is better)
Translates to: LWVVRCTGDSPRNCLPPCTVAPP*PTFPAA
Trigger: GGCAGCAGGGAACGTGGGTCAGGGTGGGGCAACAGT...ACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCTCACCACCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR-3UTR TCA 90 bp GGGCAAGCAGGGGCAATGCAGGAATCATCTACTAACTCCAAGTCTGAGAAGGGACTGAGGCCCCGCACCTaGTGCCACTGTTGCCCCACC +
Preference number: 2 (lower is better)
Translates to: GQAGAMQESSTNSKSEKGLRPRT*CHCCPT
Trigger: GGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAG...TCCCTTCTCAGACTTGGAGTTAGTAGATGATTCCTGCATTGCCCCTGCTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR-3UTR TCA 90 bp AGAAATCCAGGAAGGCCCTCTTGGCCCAGCCAAGAGAACGAGGGCTGCAGCTGCATAGGCCTGGGGGACTaGCTCCTTGGAGAAGAGTTC +
Preference number: 2 (lower is better)
Translates to: RNPGRPSWPSQENEGCSCIGLGD*LLGEEF
Trigger: GAACTCTTCTCCAAGGAGTCAGTCCCCCAGGCCTAT...GCAGCTGCAGCCCTCGTTCTCTTGGCTGGGCCAAGAGGGCCTTCCTGGATTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR-3UTR TCA 90 bp CTTCCGGTGCAATTCATCTTGCTTGGACTTCAGGGTGGCGTCGGTGGCCTGCAGCCCGTGCGTACATGCTaGTGGCATCTCGGTATGAGC +
Preference number: 2 (lower is better)
Translates to: LPVQFILLGLQGGVGGLQPVRTC*WHLGMS
Trigger: GCTCATACCGAGATGCCATCAGCATGTACGCACGGG...CTGCAGGCCACCGACGCCACCCTGAAGTCCAAGCAAGATGAATTGCACCGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR TCA 90 bp TCCTCCTGCTCCGGCACCCGGCTCAGCACCACATCTCGAGTTGCCATGGATTCGCCCTCTCAAAACAGGTaGTCACTTCCTCCTCCCTCT +
Preference number: 2 (lower is better)
Translates to: SSCSGTRLSTTSRVAMDSPSQNR*SLPPPS
Trigger: AGAGGGAGGAGGAAGTGATCACCTGTTTTGAGAGGG...CGAATCCATGGCAACTCGAGATGTGGTGCTGAGCCGGGTGCCGGAGCAGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR TCA 90 bp CAGCATCAGACCCAGGCTATGCATGATGCGCACGCCATCTGGGTTCACCGTGAGGGACACAGCGTAGGCTaGCTTCCCACAAGCCACCAT +
Preference number: 2 (lower is better)
Translates to: QHQTQAMHDAHAIWVHREGHSVG*LPTSHH
Trigger: ATGGTGGCTTGTGGGAAGTCAGCCTACGCTGTGTCC...CTCACGGTGAACCCAGATGGCGTGCGCATCATGCATAGCCTGGGTCTGATGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR-3UTR GCA 90 bp GCAGTTTCTTCACATTGTGACCGCCCTGGGCAAGACCTGAGAGAGATCCAGAAGCTCCCTCCCTGCGGCTaGAGCGTCGTCAGAGCTCTC +
Preference number: 2 (lower is better)
Translates to: AVSSHCDRPGQDLREIQKLPPCG*SVVRAL
Trigger: GAGAGCTCTGACGACGCTGCAGCCGCAGGGAGGGAG...CTTCTGGATCTCTCTCAGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR CCA 90 bp CACTTGCCCGCAGTTTCTTCACATTGTGACCGCCCTGGGCAAGACCTGAGAGAGCCAGGAAGGCCCTCTTaGCCCAGCCAAGAGAACGAG +
Preference number: 2 (lower is better)
Translates to: HLPAVSSHCDRPGQDLREPGRPS*PSQENE
Trigger: CTCGTTCTCTTGGCTGGGCCAAGAGGGCCTTCCTGG...CTCTCTCAGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACTGCGGGCAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR-3UTR CCA 90 bp ACTCCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCCCATCAGGGGCACGGTaGGGTCCGAGGGCCGCAACT +
Preference number: 2 (lower is better)
Translates to: TPSLRREPRNLIVFPLARPSGAR*GPRAAT
Trigger: AGTTGCGGCCCTCGGACCCCACCGTGCCCCTGATGG...GCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR TCA 90 bp CTGGTCTCAGAGGGCAAGCAGGGGCAATGCAGGAATCATCTACTAACTCCAAGTACTGTTGCCCCACCCTaGCCCACGTTCCCTGCTGCC +
Preference number: 2 (lower is better)
Translates to: LVSEGKQGQCRNHLLTPSTVAPP*PTFPAA
Trigger: GGCAGCAGGGAACGTGGGTCAGGGTGGGGCAACAGT...ACTTGGAGTTAGTAGATGATTCCTGCATTGCCCCTGCTTGCCCTCTGAGACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR-3UTR TCA 90 bp ATCAGCAATGCCCGAGGGGATCTCTGTTCAGACGTGAGTCCTGCCTTGGCCTCTGCCCTGGGCAAGACCTaGGAGAGATCCAGAAGTCTG +
Preference number: 2 (lower is better)
Translates to: ISNARGDLCSDVSPALASALGKT*ERSRSL
Trigger: CAGACTTCTGGATCTCTCTCAGGTCTTGCCCAGGGC...AGAGGCCAAGGCAGGACTCACGTCTGAACAGAGATCCCCTCGGGCATTGCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR-3UTR TCA 90 bp TGGGTGGAGATGGAAGTGTTAGGGCCGGTGCTCAGTACCCCTGGTCAGACCCCAAGTTTCTTCACATTGTaGCCGCCCTGGGCAAGACCT +
Preference number: 2 (lower is better)
Translates to: WVEMEVLGPVLSTPGQTPSFFTL*PPWARP
Trigger: AGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACT...TGGGGTCTGACCAGGGGTACTGAGCACCGGCCCTAACACTTCCATCTCCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR-3UTR TCA 90 bp AAGGTGGCCCATCAGCAATGCCCGAGGGGATCTCTGTTCAGACGTGAGTCCTGCCGGGAAATGCAGTGCTaGGCTAGTGTGCCATGGATG +
Preference number: 2 (lower is better)
Translates to: KVAHQQCPRGSLFRRESCREMQC*ASVPWM
Trigger: CATCCATGGCACACTAGCTCAGCACTGCATTTCCCG...GCAGGACTCACGTCTGAACAGAGATCCCCTCGGGCATTGCTGATGGGCCACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR-3UTR TCA 90 bp AGCCAGAGTCTGCATCATGGGCATCAGGCAAAGTCAGGTGCATGCCACTCTGCTTCTCCTCCTTGCCCATaGACTCAGGCAGAGGGTGGG +
Preference number: 2 (lower is better)
Translates to: SQSLHHGHQAKSGACHSASPPCP*TQAEGG
Trigger: CCCACCCTCTGCCTGAGTTCATGGGCAAGGAGGAGA...AGCAGAGTGGCATGCACCTGACTTTGCCTGATGCCCATGATGCAGACTCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR GCA 90 bp AGCATCAGACCCAGGCTATGCATGATGCGCACGCCATCTGGGTTCACCGTGAGCATCAATCCCGGCCCGTaGGTACATGCTGATGGCATC +
Preference number: 2 (lower is better)
Translates to: SIRPRLCMMRTPSGFTVSINPGP*VHADGI
Trigger: GATGCCATCAGCATGTACGCACGGGCCGGGATTGAT...GCTCACGGTGAACCCAGATGGCGTGCGCATCATGCATAGCCTGGGTCTGATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR GCA 90 bp TGCATCATGGGCATCAGGCAAAGTCAGGTGCATGCCACTCTGCTTCTTCATGGTGAGAGAGGCCTCCCCTaGAGGACCTCTGACCACCGG +
Preference number: 2 (lower is better)
Translates to: CIMGIRQSQVHATLLLHGERGLP*RTSDHR
Trigger: CCGGTGGTCAGAGGTCCTGCAGGGGAGGCCTCTCTC...ACCATGAAGAAGCAGAGTGGCATGCACCTGACTTTGCCTGATGCCCATGATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR CCA 90 bp ATCAGCAATGCCCGAGGGGATCTCTGTTCAGACGTGAGTCCTGCCTTGGCCTCTGTCAGCAACTTGGCCTaGCCCTCTGCTGCTTCCAAC +
Preference number: 2 (lower is better)
Translates to: ISNARGDLCSDVSPALASVSNLA*PSAASN
Trigger: GTTGGAAGCAGCAGAGGGCCAGGCCAAGTTGCTGAC...AGAGGCCAAGGCAGGACTCACGTCTGAACAGAGATCCCCTCGGGCATTGCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR-3UTR CCA 90 bp GCAGTTTCTTCACATTGTGACCGCCCTGGGCAAGACCTGAGAGAGATCCAGAAGACATCCCTCCCCAGGTaGGCCCAGGTCTTGGCTTCG +
Preference number: 2 (lower is better)
Translates to: AVSSHCDRPGQDLREIQKTSLPR*AQVLAS
Trigger: CGAAGCCAAGACCTGGGCCCACCTGGGGAGGGATGT...CTTCTGGATCTCTCTCAGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR-3UTR CCA 90 bp CCTCCAGGTTGCCCTTCACCTCAGCCAGCCGGCCCCGCATATAGAGTACTGAGTTGCCCAGGATCAGCATaGCCTCACACATGTACTGTG +
Preference number: 2 (lower is better)
Translates to: PPGCPSPQPAGPAYRVLSCPGSA*PHTCTV
Trigger: CACAGTACATGTGTGAGGCCATGCTGATCCTGGGCA...ACTCAGTACTCTATATGCGGGGCCGGCTGGCTGAGGTGAAGGGCAACCTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR CCA 90 bp AAGGCACTTGGTAGCAGGGGGAAAGAGCAAGGTGGGGCCCAGCTGGTCTCAGAGGGGGCTTGTTCTCCATaGACATGTCATCAATCCCGG +
Preference number: 2 (lower is better)
Translates to: KALGSRGKEQGGAQLVSEGACSP*TCHQSR
Trigger: CCGGGATTGATGACATGTCCATGGAGAACAAGCCCC...CTCTGAGACCAGCTGGGCCCCACCTTGCTCTTTCCCCCTGCTACCAAGTGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR CCA 90 bp CCTCCAGGTTGCCCTTCACCTCAGCCAGCCGGCCCCGCATATAGAGTACTGAGTTCAGGAGGTCATAGATaGCTGCGGCATTCTGCAAGC +
Preference number: 2 (lower is better)
Translates to: PPGCPSPQPAGPAYRVLSSGGHR*LRHSAS
Trigger: GCTTGCAGAATGCCGCAGCCATCTATGACCTCCTGA...ACTCAGTACTCTATATGCGGGGCCGGCTGGCTGAGGTGAAGGGCAACCTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR CCA 90 bp TGGATGCAGAAACCTGCTTCCTTGAGGTGCTGCTGCTCCATGAACAGCTCAGCATGGTCCACAGCTGCATaGGGCCCTGCTTCAGGACCG +
Preference number: 2 (lower is better)
Translates to: WMQKPASLRCCCSMNSSAWSTAA*GPASGP
Trigger: CGGTCCTGAAGCAGGGCCCCATGCAGCTGTGGACCA...TGCTGAGCTGTTCATGGAGCAGCAGCACCTCAAGGAAGCAGGTTTCTGCATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR CAA 90 bp AGACTGTTTCCCAAGGCACCAACAAAGAAATCCAGGAAGGCCCTCTaGGCCCAGCCAAGAGAACGAGGGCTGCAGCTGCAGAGGCGTTCA +
Preference number: 2 (lower is better)
Translates to: RLFPKAPTKKSRKAL*AQPRERGLQLQRRS
Trigger: TGAACGCCTCTGCAGCTGCAGCCCTCGTTCTCTTGGCTGGGCCAAGAGGGCCTTCCTGGATTTCTTTGTTGGTGCCTTGGGAAACAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR-3UTR TCA 90 bp GGGAGCAAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAACTGTTGCCCCACCCTaGCCCACGTTCCCTGCTGCC +
Preference number: 2 (lower is better)
Translates to: GSKSGHHKTLQRHLGFKSTVAPP*PTFPAA
Trigger: GGCAGCAGGGAACGTGGGTCAGGGTGGGGCAACAGT...TGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTTGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR-3UTR TCA 90 bp ACAAGCCTGCTTCCCCTCCAAGGGTTTCTTTATTCAACCTGCAAAGTCACTGTCGGTGAAGGACAGCTGTaGGGCTCCCCGCTGCCCAGC +
Preference number: 2 (lower is better)
Translates to: TSLLPLQGFLYSTCKVTVGEGQL*GSPLPS
Trigger: GCTGGGCAGCGGGGAGCCTCACAGCTGTCCTTCACC...GACAGTGACTTTGCAGGTTGAATAAAGAAACCCTTGGAGGGGAAGCAGGCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR-3UTR TCA 90 bp AGCCCTCTCCAGCGTCTGCAGTGCCTTCCGGTGCAATTCATCTTGCTTGGACTTGACAGCAGCCGCATCTaGTACAGGGGCTTGTTCTCC +
Preference number: 2 (lower is better)
Translates to: SPLQRLQCLPVQFILLGLDSSRI*YRGLFS
Trigger: GGAGAACAAGCCCCTGTATCAGATGCGGCTGCTGTC...AAGTCCAAGCAAGATGAATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR GCA 90 bp AGACCTGAGAGAGATCCAGAAGTCTGTACTGTGCTGAGAGTGGGGAGTGAGAACCTGACCCACGTTCCCTaGTGCCTCTCCCTCTGGCCA +
Preference number: 2 (lower is better)
Translates to: RPERDPEVCTVLRVGSENLTHVP*CLSLWP
Trigger: TGGCCAGAGGGAGAGGCAGCAGGGAACGTGGGTCAG...GTTCTCACTCCCCACTCTCAGCACAGTACAGACTTCTGGATCTCTCTCAGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR-3UTR GCA 90 bp AGGTTGAAGTTCTCAGGGTGCTCGGTGATGGCCATGTTGACAACATCCAGGGCAAGCGAAGGGACCCGATaGAGACCTTCGCGGCCATCA +
Preference number: 2 (lower is better)
Translates to: RLKFSGCSVMAMLTTSRASEGTR*RPSRPS
Trigger: TGATGGCCGCGAAGGTCTGCATCGGGTCCCTTCGCT...TGCCCTGGATGTTGTCAACATGGCCATCACCGAGCACCCTGAGAACTTCAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR-3UTR CCA 90 bp CCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCAGTCCGCTGCCCAGCTCTTaGGGAGCAAGTCTGGTCACC +
Preference number: 2 (lower is better)
Translates to: PSLRREPRNLIVFPLARSPLPSS*GASLVT
Trigger: GGTGACCAGACTTGCTCCCCAAGAGCTGGGCAGCGG...ACTGCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR-3UTR CCA 90 bp ACTCCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCCCGCTGCCCAGCTCTTaGGGAGCAAGTCTGGTCACC +
Preference number: 2 (lower is better)
Translates to: TPSLRREPRNLIVFPLARPLPSS*GASLVT
Trigger: GGTGACCAGACTTGCTCCCCAAGAGCTGGGCAGCGG...GCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR-3UTR CCA 90 bp AGCCCTCTCCAGCGTCTGCAGTGCCTTCCGGTGCAATTCATCTTGCTTGGACTTACATCGCCAGGGAGATaGGGTGGGTGGAGATGGAAG +
Preference number: 2 (lower is better)
Translates to: SPLQRLQCLPVQFILLGLTSPGR*GGWRWK
Trigger: CTTCCATCTCCACCCACCCCATCTCCCTGGCGATGT...AAGTCCAAGCAAGATGAATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR CCA 90 bp TTAGCAACACTCTCACCAGCTCAAATCCACATTTTCCCAGAGGGTCCTCCCTCCGGAGGCTGCTTGGGCTaGAGCACATCGCCAGGGAGA +
Preference number: 2 (lower is better)
Translates to: LATLSPAQIHIFPEGPPSGGCLG*STSPGR
Trigger: TCTCCCTGGCGATGTGCTCCAGCCCAAGCAGCCTCC...GGAGGGAGGACCCTCTGGGAAAATGTGGATTTGAGCTGGTGAGAGTGTTGCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR-3UTR CCA 90 bp ACTCCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCGGAGGCTGCTTGGGCTaGAGCACATCGCCAGGGAGA +
Preference number: 2 (lower is better)
Translates to: TPSLRREPRNLIVFPLARGGCLG*STSPGR
Trigger: TCTCCCTGGCGATGTGCTCCAGCCCAAGCAGCCTCC...GCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR-3UTR CCA 90 bp ACTCCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCCCTACGGAGGCTGCTTaGGCTGGAGCACATCGCCAG +
Preference number: 2 (lower is better)
Translates to: TPSLRREPRNLIVFPLARPTEAA*AGAHRQ
Trigger: CTGGCGATGTGCTCCAGCCCAAGCAGCCTCCGTAGG...GCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR-3UTR CCA 90 bp GCTCAAGGCTGGTGTGGGAGCTACATGCCCAGTGAATATACATGCTGCTTCAGACCTACGGAGGCTGCTTaGGCTGGAGCACATCGCCAG +
Preference number: 2 (lower is better)
Translates to: AQGWCGSYMPSEYTCCFRPTEAA*AGAHRQ
Trigger: CTGGCGATGTGCTCCAGCCCAAGCAGCCTCCGTAGG...TCTGAAGCAGCATGTATATTCACTGGGCATGTAGCTCCCACACCAGCCTTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR-3UTR CCA 90 bp CATGATGCGCACGCCATCTGGGTTCACCGTGAGCGCCTCCTTGTACAGCTGCTTTCCTTCCGAGGAAGGTaGAGCTATGATGAACCAGGG +
Preference number: 2 (lower is better)
Translates to: HDAHAIWVHRERLLVQLLSFRGR*SYDEPG
Trigger: CCCTGGTTCATCATAGCTCCACCTTCCTCGGAAGGA...AAGCAGCTGTACAAGGAGGCGCTCACGGTGAACCCAGATGGCGTGCGCATCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR CCA 90 bp AGCATCAGACCCAGGCTATGCATGATGCGCACGCCATCTGGGTTCACCGTGAGCGCAATTCATCTTGCTTaGACTTCAGGGTGGCGTCGG +
Preference number: 2 (lower is better)
Translates to: SIRPRLCMMRTPSGFTVSAIHLA*TSGWRR
Trigger: CCGACGCCACCCTGAAGTCCAAGCAAGATGAATTGC...GCTCACGGTGAACCCAGATGGCGTGCGCATCATGCATAGCCTGGGTCTGATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR-3UTR TCA 90 bp TCTCATAGTCTTCCCACTTGCCCGCAGTTTCTTCACATTGTGACCGCCCTGGGCAAAGATGTATTTCCCTaGGGCCCCGCACCTGATGCC +
Preference number: 2 (lower is better)
Translates to: SHSLPTCPQFLHIVTALGKDVFP*GPAPDA
Trigger: GGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTT...GCCCAGGGCGGTCACAATGTGAAGAAACTGCGGGCAAGTGGGAAGACTATGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR-3UTR TCA 90 bp CATGATGCGCACGCCATCTGGGTTCACCGTGAGCGCCTCCTTGTACAGCTGCTTTGGCCGCCATCACTTTaGAGTTCTGAGTTGCTTTGG +
Preference number: 2 (lower is better)
Translates to: HDAHAIWVHRERLLVQLLWPPSL*SSELLW
Trigger: CCAAAGCAACTCAGAACTTCAAAGTGATGGCGGCCA...AAGCAGCTGTACAAGGAGGCGCTCACGGTGAACCCAGATGGCGTGCGCATCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR GCA 90 bp TGGGTGGAGATGGAAGTGTTAGGGCCGGTGCTCAGTACCCCTGGTCAGACCCCAGGCAAGCAGGGGCAATaGAGGAATCATCTACTAACT +
Preference number: 2 (lower is better)
Translates to: WVEMEVLGPVLSTPGQTPGKQGQ*RNHLLT
Trigger: AGTTAGTAGATGATTCCTGCATTGCCCCTGCTTGCC...TGGGGTCTGACCAGGGGTACTGAGCACCGGCCCTAACACTTCCATCTCCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR-3UTR GCA 90 bp TTAGCAACACTCTCACCAGCTCAAATCCACATTTTCCCAGAGGGTCCTCCCTCCTGGCCTCCCTCATCCTaGAACAGCCCCTCCTGTCCA +
Preference number: 2 (lower is better)
Translates to: LATLSPAQIHIFPEGPPSWPPSS*NSPSCP
Trigger: TGGACAGGAGGGGCTGTTGCAGGATGAGGGAGGCCA...GGAGGGAGGACCCTCTGGGAAAATGTGGATTTGAGCTGGTGAGAGTGTTGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR-3UTR GCA 90 bp ATCAGCAATGCCCGAGGGGATCTCTGTTCAGACGTGAGTCCTGCCTTGGCCTCTGCTTCCTTGAGGTGCTaGTGCTCCATGAACAGCTCA +
Preference number: 2 (lower is better)
Translates to: ISNARGDLCSDVSPALASASLRC*CSMNSS
Trigger: TGAGCTGTTCATGGAGCAGCAGCACCTCAAGGAAGC...AGAGGCCAAGGCAGGACTCACGTCTGAACAGAGATCCCCTCGGGCATTGCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR CCA 90 bp ATCAGCAATGCCCGAGGGGATCTCTGTTCAGACGTGAGTCCTGCCTTGGCCTCTTCCTTCCGAGGAAGGTaGAGCTATGATGAACCAGGG +
Preference number: 2 (lower is better)
Translates to: ISNARGDLCSDVSPALASSFRGR*SYDEPG
Trigger: CCCTGGTTCATCATAGCTCCACCTTCCTCGGAAGGA...AGAGGCCAAGGCAGGACTCACGTCTGAACAGAGATCCCCTCGGGCATTGCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR-3UTR CCA 90 bp TTAGCAACACTCTCACCAGCTCAAATCCACATTTTCCCAGAGGGTCCTCCCTCCGGTGGGCCCAGGTCTTaGCTTCGATGCCTTCTCTGG +
Preference number: 2 (lower is better)
Translates to: LATLSPAQIHIFPEGPPSGGPRS*LRCLLW
Trigger: CCAGAGAAGGCATCGAAGCCAAGACCTGGGCCCACC...GGAGGGAGGACCCTCTGGGAAAATGTGGATTTGAGCTGGTGAGAGTGTTGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR-3UTR TCA 90 bp TGGGTGGTGAGATGTACTGGGGACAGTCCTAGAAACTGCCTACCTCCATGTTGGAAAGATGTATTTCCCTaGGGCCCCGCACCTGATGCC +
Preference number: 2 (lower is better)
Translates to: WVVRCTGDSPRNCLPPCWKDVFP*GPAPDA
Trigger: GGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTT...CCAACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCTCACCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR-3UTR GCA 90 bp ACTCCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCCAAGAGAACGAGGGCTaGAGCTGCAGAGGCGTTCAC +
Preference number: 2 (lower is better)
Translates to: TPSLRREPRNLIVFPLARQENEG*SCRGVH
Trigger: GTGAACGCCTCTGCAGCTGCAGCCCTCGTTCTCTTG...GCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR-3UTR CCA 90 bp ATCAGCAATGCCCGAGGGGATCTCTGTTCAGACGTGAGTCCTGCCTTGGCCTCTCTTGGGGAGCAAGTCTaGTCACCACAAAACTCTCCA +
Preference number: 2 (lower is better)
Translates to: ISNARGDLCSDVSPALASLGEQV*SPQNSP
Trigger: TGGAGAGTTTTGTGGTGACCAGACTTGCTCCCCAAG...AGAGGCCAAGGCAGGACTCACGTCTGAACAGAGATCCCCTCGGGCATTGCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR-3UTR CCA 90 bp AAGCGGGTGACAGCCTTTCAGATGCCTCGACGTGCTGTTATTTGTGGTCTTCTCGGGAGGCGATGGAGTTaGGTAGGCGTTCCAGAGAGA +
Preference number: 2 (lower is better)
Translates to: KRVTAFQMPRRAVICGLLGRRWS*VGVPER
Trigger: TCTCTCTGGAACGCCTACCCAACTCCATCGCCTCCC...GAGAAGACCACAAATAACAGCACGTCGAGGCATCTGAAAGGCTGTCACCCGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR TCA 90 bp TACATGCCCAGTGAATATACATGCTGCTTCAGACAAGCCTGCTTCCCCTCCAAGGCCCTGGGCAAGACCTaGGAGAGATCCAGAAGTCTG +
Preference number: 2 (lower is better)
Translates to: YMPSEYTCCFRQACFPSKALGKT*ERSRSL
Trigger: CAGACTTCTGGATCTCTCTCAGGTCTTGCCCAGGGC...CTTGGAGGGGAAGCAGGCTTGTCTGAAGCAGCATGTATATTCACTGGGCATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR-3UTR TCA 90 bp GCTCAAGGCTGGTGTGGGAGCTACATGCCCAGTGAATATACATGCTGCTTCAGAGCCAAAAGGCCAGGGTaGGGCTCGAATCAAGGCAAA +
Preference number: 2 (lower is better)
Translates to: AQGWCGSYMPSEYTCCFRAKRPG*GSNQGK
Trigger: TTTGCCTTGATTCGAGCCTCACCCTGGCCTTTTGGC...TCTGAAGCAGCATGTATATTCACTGGGCATGTAGCTCCCACACCAGCCTTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR-3UTR TCA 90 bp CCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCAGTGATGGCATCTCGGTATaGGCCCTCCACGTAATGCAG +
Preference number: 2 (lower is better)
Translates to: PSLRREPRNLIVFPLARSDGISV*ALHVMQ
Trigger: CTGCATTACGTGGAGGGCTCATACCGAGATGCCATC...ACTGCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR TCA 90 bp AGGTTGAAGTTCTCAGGGTGCTCGGTGATGGCCATGTTGACAACATCCAGGGCACTTCCTCTCCGAGGCTaGTCACCATCATGGCAAAGT +
Preference number: 2 (lower is better)
Translates to: RLKFSGCSVMAMLTTSRALPLRG*SPSWQS
Trigger: ACTTTGCCATGATGGTGATCAGCCTCGGAGAGGAAG...TGCCCTGGATGTTGTCAACATGGCCATCACCGAGCACCCTGAGAACTTCAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR-3UTR TCA 90 bp TACATGCCCAGTGAATATACATGCTGCTTCAGACAAGCCTGCTTCCCCTCCAAGATAGGCCTGGGGGACTaGCTCCTTGGAGAAGAGTTC +
Preference number: 2 (lower is better)
Translates to: YMPSEYTCCFRQACFPSKIGLGD*LLGEEF
Trigger: GAACTCTTCTCCAAGGAGTCAGTCCCCCAGGCCTAT...CTTGGAGGGGAAGCAGGCTTGTCTGAAGCAGCATGTATATTCACTGGGCATGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR-3UTR TCA 90 bp TACATGCCCAGTGAATATACATGCTGCTTCAGACAAGCCTGCTTCCCCTCCAAGCGGGAAATGCAGTGCTaGGCTAGTGTGCCATGGATG +
Preference number: 2 (lower is better)
Translates to: YMPSEYTCCFRQACFPSKREMQC*ASVPWM
Trigger: CATCCATGGCACACTAGCTCAGCACTGCATTTCCCG...CTTGGAGGGGAAGCAGGCTTGTCTGAAGCAGCATGTATATTCACTGGGCATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR-3UTR GCA 90 bp GCAGTTTCTTCACATTGTGACCGCCCTGGGCAAGACCTGAGAGAGATCCAGAAGGACAGTCCTAGAAACTaGCTACCTCCATGTTGGTGG +
Preference number: 2 (lower is better)
Translates to: AVSSHCDRPGQDLREIQKDSPRN*LPPCWW
Trigger: CCACCAACATGGAGGTAGGCAGTTTCTAGGACTGTC...CTTCTGGATCTCTCTCAGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR-3UTR GCA 90 bp TGGATGCAGAAACCTGCTTCCTTGAGGTGCTGCTGCTCCATGAACAGCTCAGCATTGAAGTTCTCAGGGTaGTCGGTGATGGCCATGTTG +
Preference number: 2 (lower is better)
Translates to: WMQKPASLRCCCSMNSSALKFSG*SVMAML
Trigger: CAACATGGCCATCACCGAGCACCCTGAGAACTTCAA...TGCTGAGCTGTTCATGGAGCAGCAGCACCTCAAGGAAGCAGGTTTCTGCATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR-3UTR GCA 90 bp TTAGCAACACTCTCACCAGCTCAAATCCACATTTTCCCAGAGGGTCCTCCCTCCAAGCTGTACAGGGTCTaGCACAGCCTCAGCACTTGT +
Preference number: 2 (lower is better)
Translates to: LATLSPAQIHIFPEGPPSKLYRV*HSLSTC
Trigger: ACAAGTGCTGAGGCTGTGGCAGACCCTGTACAGCTT...GGAGGGAGGACCCTCTGGGAAAATGTGGATTTGAGCTGGTGAGAGTGTTGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR CCA 90 bp AAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGACTGTCCAGGAAGGCCCTCTTaGCCCAGCCAAGAGAACGAG +
Preference number: 2 (lower is better)
Translates to: KSGHHKTLQRHLGFKSDCPGRPS*PSQENE
Trigger: CTCGTTCTCTTGGCTGGGCCAAGAGGGCCTTCCTGG...ACAGTCTGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR-3UTR TCA 90 bp CTGCTCCAGCTTCACCTTGGTGAACATCAGGTTGAAGTTCTCAGGGTGCTCGGTCCACTTTGGGCACCCTaGGATAAACCAACAGCATTT +
Preference number: 2 (lower is better)
Translates to: LLQLHLGEHQVEVLRVLGPLWAP*DKPTAF
Trigger: AAATGCTGTTGGTTTATCTCAGGGTGCCCAAAGTGG...ACCGAGCACCCTGAGAACTTCAACCTGATGTTCACCAAGGTGAAGCTGGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR GCA 90 bp AACACTCTCACCAGCTCAAATCCACATTTTCCCAGAGGGTCCTCCCTCCCATCCGGCAAGCAGGGGCAATaGAGGAATCATCTACTAACT +
Preference number: 2 (lower is better)
Translates to: NTLTSSNPHFPRGSSLPSGKQGQ*RNHLLT
Trigger: AGTTAGTAGATGATTCCTGCATTGCCCCTGCTTGCC...GGATGGGAGGGAGGACCCTCTGGGAAAATGTGGATTTGAGCTGGTGAGAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR-3UTR GCA 90 bp GCAGTTTCTTCACATTGTGACCGCCCTGGGCAAGACCTGAGAGAGATCCAGAAGAATCATCTCGGGAAATaGAGTGCTGAGCTAGTGTGC +
Preference number: 2 (lower is better)
Translates to: AVSSHCDRPGQDLREIQKNHLGK*SAELVC
Trigger: GCACACTAGCTCAGCACTGCATTTCCCGAGATGATT...CTTCTGGATCTCTCTCAGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR-3UTR CCA 90 bp ATCAGCAATGCCCGAGGGGATCTCTGTTCAGACGTGAGTCCTGCCTTGGCCTCTACGTGCTGTTATTTGTaGTCTTCTCCAATTCCTGCA +
Preference number: 2 (lower is better)
Translates to: ISNARGDLCSDVSPALASTCCYL*SSPIPA
Trigger: TGCAGGAATTGGAGAAGACCACAAATAACAGCACGT...AGAGGCCAAGGCAGGACTCACGTCTGAACAGAGATCCCCTCGGGCATTGCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR TCA 90 bp GCAGTTTCTTCACATTGTGACCGCCCTGGGCAAGACCTGAGAGAGATCCAGAAGATCACTTTGAAGTTCTaGGTTGCTTTGGTCTCCACA +
Preference number: 2 (lower is better)
Translates to: AVSSHCDRPGQDLREIQKITLKF*VALVST
Trigger: TGTGGAGACCAAAGCAACTCAGAACTTCAAAGTGAT...CTTCTGGATCTCTCTCAGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR CCA 90 bp CTGTGGGTGGTGAGATGTACTGGGGACAGTCCTAGAAACTGCCTACCTCCATGTTTATTAGGGGTGTACTaGTATGGACTTCTCAGCAGA +
Preference number: 2 (lower is better)
Translates to: LWVVRCTGDSPRNCLPPCLLGVY*YGLLSR
Trigger: TCTGCTGAGAAGTCCATACCAGTACACCCCTAATAA...ACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCTCACCACCCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR GCA 72 bp TCGCCCAGGCCCTGCCACGCCTCGTGGCACGTACTCTaGCTCTCCACGGCATCACGAAGCACCTTCTGGGCC +
Preference number: 3 (lower is better)
Translates to: SPRPCHASWHVL*LSTASRSTFWA
Trigger: GGCCCAGAAGGTGCTTCGTGATGCCGTGGAGAGGCAGAGTACGTGCCACGAGGCGTGGCAGGGCCTGGGCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR CCA 72 bp ACCCGATGCAGACCTTCGCGGCCATCAGGGGCACGGTaGGGTCCGAGGGCCGCAACTTCACACACTCCCGCA +
Preference number: 3 (lower is better)
Translates to: TRCRPSRPSGAR*GPRAATSHTPA
Trigger: TGCGGGAGTGTGTGAAGTTGCGGCCCTCGGACCCCACCGTGCCCCTGATGGCCGCGAAGGTCTGCATCGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR CCA 72 bp CCCTCTCTGTCAGGCGGAAGCGGGAGGCGATGGAGTTaGGTAGGCGTTCCAGAGAGAGGCCTCCCCTGCAGG +
Preference number: 3 (lower is better)
Translates to: PSLSGGSGRRWS*VGVPERGLPCR
Trigger: CCTGCAGGGGAGGCCTCTCTCTGGAACGCCTACCCAACTCCATCGCCTCCCGCTTCCGCCTGACAGAGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR TCA 72 bp AGGCGTTCCAGAGAGAGGCCTCCCCTGCAGGACCTCTaGCCACCGGGACTGTGTTCCCCCAAGAAGCCGGAG +
Preference number: 3 (lower is better)
Translates to: RRSRERPPLQDL*PPGLCSPKKPE
Trigger: CTCCGGCTTCTTGGGGGAACACAGTCCCGGTGGTCAGAGGTCCTGCAGGGGAGGCCTCTCTCTGGAACGCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR TCA 72 bp GCCCTGCTTCAGGACCGAAGAGGGCATAGTCAGCTCTaGCATGGCCTCCTCCAGCCGGGAGGCGGCGATGGA +
Preference number: 3 (lower is better)
Translates to: ALLQDRRGHSQL*HGLLQPGGGDG
Trigger: TCCATCGCCGCCTCCCGGCTGGAGGAGGCCATGTCAGAGCTGACTATGCCCTCTTCGGTCCTGAAGCAGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR GCA 72 bp AGTGCTCTGCTTCCTCTAGCCAGCGAAGGGACCCGATaGAGACCTTCGCGGCCATCAGGGGCACGGTGGGGT +
Preference number: 3 (lower is better)
Translates to: SALLPLASEGTR*RPSRPSGARWG
Trigger: ACCCCACCGTGCCCCTGATGGCCGCGAAGGTCTGCATCGGGTCCCTTCGCTGGCTAGAGGAAGCAGAGCACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR TCA 72 bp CTTCACCTCAGCCAGCCGGCCCCGCATATAGAGTACTaGGTGAGAAGTGGGGAAGAGGCCCGCCGCCTCCTG +
Preference number: 3 (lower is better)
Translates to: LHLSQPAPHIEY*VRSGEEARRLL
Trigger: CAGGAGGCGGCGGGCCTCTTCCCCACTTCTCACTCAGTACTCTATATGCGGGGCCGGCTGGCTGAGGTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR GCA 72 bp GCGGCATTCTGCAAGCTCACTGTCCGGTCCTCCTCCTaGTCCGGCACCCGGCTCAGCACCACATCTCGAGTT +
Preference number: 3 (lower is better)
Translates to: AAFCKLTVRSSS*SGTRLSTTSRV
Trigger: AACTCGAGATGTGGTGCTGAGCCGGGTGCCGGAGCAGGAGGAGGACCGGACAGTGAGCTTGCAGAATGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR CCA 72 bp CCTTTCCCACATCCCTCCCCAGGTGGGCCCAGGTCTTaGCTTCGATGCCTTCTCTGGCCTCCCTCATCCTGC +
Preference number: 3 (lower is better)
Translates to: PFPHPSPGGPRS*LRCLLWPPSSC
Trigger: GCAGGATGAGGGAGGCCAGAGAAGGCATCGAAGCCAAGACCTGGGCCCACCTGGGGAGGGATGTGGGAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR GCA 72 bp GGGGAAGAGGCCCGCCGCCTCCTGGATGCAGAAACCTaGTTCCTTGAGGTGCTGCTGCTCCATGAACAGCTC +
Preference number: 3 (lower is better)
Translates to: GEEARRLLDAET*FLEVLLLHEQL
Trigger: GAGCTGTTCATGGAGCAGCAGCACCTCAAGGAAGCAGGTTTCTGCATCCAGGAGGCGGCGGGCCTCTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR GCA 72 bp CCATCTGGGTTCACCGTGAGCGCCTCCTTGTACAGCTaGTTGGCCTCCTCCAGGTTGCCCTTCACCTCAGCC +
Preference number: 3 (lower is better)
Translates to: PSGFTVSASLYS*LASSRLPFTSA
Trigger: GGCTGAGGTGAAGGGCAACCTGGAGGAGGCCAAGCAGCTGTACAAGGAGGCGCTCACGGTGAACCCAGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR CCA 72 bp CCAGCCGGCCCCGCATATAGAGTACTGAGTGAGAAGTaGGGAAGAGGCCCGCCGCCTCCTGGATGCAGAAAC +
Preference number: 3 (lower is better)
Translates to: PAGPAYRVLSEK*GRGPPPPGCRN
Trigger: GTTTCTGCATCCAGGAGGCGGCGGGCCTCTTCCCCACTTCTCACTCAGTACTCTATATGCGGGGCCGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR-3UTR CAA 90 bp GGCCTCCCAGCTGGGAGAAGCTGTACAGGGTCTGCCACAGCCTCAGCACTTGTCAGACCCCAAAGGCACTaGGTAGCAGGGGGAAAGAGC +
Preference number: 3 (lower is better)
Translates to: GLPAGRSCTGSATASALVRPQRH*VAGGKS
Trigger: GCTCTTTCCCCCTGCTACCAAGTGCCTTTGGGGTCT...GACAAGTGCTGAGGCTGTGGCAGACCCTGTACAGCTTCTCCCAGCTGGGAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR CAA 90 bp AGCATCAGACCCAGGCTATGCATGATGCGCACGCCATCTGGGTTCACCGTGAGCCGGGAGGCGATGGAGTaGGGTAGGCGTTCCAGAGAG +
Preference number: 3 (lower is better)
Translates to: SIRPRLCMMRTPSGFTVSREAME*GRRSRE
Trigger: CTCTCTGGAACGCCTACCCAACTCCATCGCCTCCCG...GCTCACGGTGAACCCAGATGGCGTGCGCATCATGCATAGCCTGGGTCTGATGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR GCA 72 bp CAATGCCCGAGGGGATCTCTGTTCAGACGTGAGTCCTaGCTTGGCCTCTCCCAGCAATGCCCAGAGGCAGCA +
Preference number: 3 (lower is better)
Translates to: QCPRGSLFRRES*LGLSQQCPEAA
Trigger: TGCTGCCTCTGGGCATTGCTGGGAGAGGCCAAGGCAGGACTCACGTCTGAACAGAGATCCCCTCGGGCATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR GCA 72 bp TCCAGCGTCTGCAGTGCCTTCCGGTGCAATTCATCTTaGTTGGACTTCAGGGTGGCGTCGGTGGCCTGCAGG +
Preference number: 3 (lower is better)
Translates to: SSVCSAFRCNSS*LDFRVASVACR
Trigger: CCTGCAGGCCACCGACGCCACCCTGAAGTCCAAGCAAGATGAATTGCACCGGAAGGCACTGCAGACGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR GCA 72 bp GGGCGCCAGCTGCTGAGCCCTCTCCAGCGTCTGCAGTaGCTTCCGGTGCAATTCATCTTGCTTGGACTTCAG +
Preference number: 3 (lower is better)
Translates to: GRQLLSPLQRLQ*LPVQFILLGLQ
Trigger: CTGAAGTCCAAGCAAGATGAATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGCTCAGCAGCTGGCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR GCA 72 bp TCTAGGCCTCCCAGCTGGGAGAAGCTGTACAGGGTCTaGCACAGCCTCAGCACTTGTCTGCAGGTCACGAGG +
Preference number: 3 (lower is better)
Translates to: SRPPSWEKLYRV*HSLSTCLQVTR
Trigger: CCTCGTGACCTGCAGACAAGTGCTGAGGCTGTGGCAGACCCTGTACAGCTTCTCCCAGCTGGGAGGCCTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR GCA 72 bp GCCGCCTCCTGGATGCAGAAACCTGCTTCCTTGAGGTaGTGCTGCTCCATGAACAGCTCAGCAGCCTGCAGC +
Preference number: 3 (lower is better)
Translates to: AASWMQKPASLR*CCSMNSSAACS
Trigger: GCTGCAGGCTGCTGAGCTGTTCATGGAGCAGCAGCACCTCAAGGAAGCAGGTTTCTGCATCCAGGAGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR CCA 72 bp ACCACAGGATCTAAAGCCTACGGAGGCTGCTTGGGCTaGAGCACATCGCCAGGGAGATGGGGTGGGTGGAGA +
Preference number: 3 (lower is better)
Translates to: TTGSKAYGGCLG*STSPGRWGGWR
Trigger: TCTCCACCCACCCCATCTCCCTGGCGATGTGCTCCAGCCCAAGCAGCCTCCGTAGGCTTTAGATCCTGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR CCA 72 bp ACGGCATCACGAAGCACCTTCTGGGCCAAGCTCTTGTaGCCCAGCCGACTCAGCATCAGACCCAGGCTATGC +
Preference number: 3 (lower is better)
Translates to: TASRSTFWAKLL*PSRLSIRPRLC
Trigger: GCATAGCCTGGGTCTGATGCTGAGTCGGCTGGGCCACAAGAGCTTGGCCCAGAAGGTGCTTCGTGATGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR CCA 72 bp GTACTCTGCCTCTCCACGGCATCACGAAGCACCTTCTaGGCCAAGCTCTTGTGGCCCAGCCGACTCAGCATC +
Preference number: 3 (lower is better)
Translates to: VLCLSTASRSTF*AKLLWPSRLSI
Trigger: GATGCTGAGTCGGCTGGGCCACAAGAGCTTGGCCCAGAAGGTGCTTCGTGATGCCGTGGAGAGGCAGAGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR TCA 72 bp GCAGCTGCAGAGGCGTTCACTAAAGATGTATTTCCCTaGGGCCCCGCACCTGATGCCACTGTTGCCCCACCC +
Preference number: 3 (lower is better)
Translates to: AAAEAFTKDVFP*GPAPDATVAPP
Trigger: GGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAGTGAACGCCTCTGCAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR TCA 72 bp CCATCAGCAATGCCCGAGGGGATCTCTGTTCAGACGTaGGTCCTGCCTTGGCCTCTCCCAGCAATGCCCAGA +
Preference number: 3 (lower is better)
Translates to: PSAMPEGISVQT*VLPWPLPAMPR
Trigger: TCTGGGCATTGCTGGGAGAGGCCAAGGCAGGACTCACGTCTGAACAGAGATCCCCTCGGGCATTGCTGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR TCA 72 bp CCCGGCCCGTGCGTACATGCTGATGGCATCTCGGTATaGGCCCTCCACGTAATGCAGTTTGCCCAGGATCAG +
Preference number: 3 (lower is better)
Translates to: PGPCVHADGISV*ALHVMQFAQDQ
Trigger: CTGATCCTGGGCAAACTGCATTACGTGGAGGGCTCATACCGAGATGCCATCAGCATGTACGCACGGGCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR TCA 72 bp CCCGCCAGGTGCTTGGCCGCCATCACTTTGAAGTTCTaGGTTGCTTTGGTCTCCACAGTCCGCAGCACCTCC +
Preference number: 3 (lower is better)
Translates to: PARCLAAITLKF*VALVSTVRSTS
Trigger: GGAGGTGCTGCGGACTGTGGAGACCAAAGCAACTCAGAACTTCAAAGTGATGGCGGCCAAGCACCTGGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR GCA 72 bp GCTTCTTCCCTGCAGCTGAAGGTGGCCCATCAGCAATaGCCGAGGGGATCTCTGTTCAGACGTGAGTCCTGC +
Preference number: 3 (lower is better)
Translates to: ASSLQLKVAHQQ*PRGSLFRRESC
Trigger: GCAGGACTCACGTCTGAACAGAGATCCCCTCGGGCATTGCTGATGGGCCACCTTCAGCTGCAGGGAAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR GCA 72 bp AGCTGTACAGGGTCTGCCACAGCCTCAGCACTTGTCTaGAGGTCACGAGGGCTTCCTCTGGGCCTTTCAGCA +
Preference number: 3 (lower is better)
Translates to: SCTGSATASALV*RSRGLPLGLSA
Trigger: TGCTGAAAGGCCCAGAGGAAGCCCTCGTGACCTGCAGACAAGTGCTGAGGCTGTGGCAGACCCTGTACAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR GCA 72 bp ATCTGTTCCAGCGTGGTCCACAGCTGCATGGGGCCCTaGTTCAGGACCGAAGAGGGCATAGTCAGCTCTGAC +
Preference number: 3 (lower is better)
Translates to: ICSSVVHSCMGP*FRTEEGIVSSD
Trigger: GTCAGAGCTGACTATGCCCTCTTCGGTCCTGAAGCAGGGCCCCATGCAGCTGTGGACCACGCTGGAACAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR GCA 72 bp GCCTCCTGGATGCAGAAACCTGCTTCCTTGAGGTGCTaGTGCTCCATGAACAGCTCAGCAGCCTGCAGCCAG +
Preference number: 3 (lower is better)
Translates to: ASWMQKPASLRC*CSMNSSAACSQ
Trigger: CTGGCTGCAGGCTGCTGAGCTGTTCATGGAGCAGCAGCACCTCAAGGAAGCAGGTTTCTGCATCCAGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR CCA 72 bp GCGTCTGCAGTGCCTTCCGGTGCAATTCATCTTGCTTaGACTTCAGGGTGGCGTCGGTGGCCTGCAGGCTAT +
Preference number: 3 (lower is better)
Translates to: ASAVPSGAIHLA*TSGWRRWPAGY
Trigger: ATAGCCTGCAGGCCACCGACGCCACCCTGAAGTCCAAGCAAGATGAATTGCACCGGAAGGCACTGCAGACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR CCA 72 bp ATGTTGACAACATCCAGGGCATGCTGGTGGTGCTTCTaGGCAGAGAAGAGCAGTGCCAGCAGGTGGAGGGCG +
Preference number: 3 (lower is better)
Translates to: MLTTSRACWWCF*AEKSSASRWRA
Trigger: CGCCCTCCACCTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCTGGATGTTGTCAACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
3UTR CCA 72 bp CCTCAGCACTTGTCTGCAGGTCACGAGGGCTTCCTCTaGGCCTTTCAGCACCTGCTCCAGCTTCACCTTGGT +
Preference number: 3 (lower is better)
Translates to: PQHLSAGHEGFL*AFQHLLQLHLG
Trigger: ACCAAGGTGAAGCTGGAGCAGGTGCTGAAAGGCCCAGAGGAAGCCCTCGTGACCTGCAGACAAGTGCTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR-3UTR CAA 90 bp CCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCAGTCCCGCTGCCCAGCTCTaGGGGAGCAAGTCTGGTCAC +
Preference number: 3 (lower is better)
Translates to: PSLRREPRNLIVFPLARSPAAQL*GSKSGH
Trigger: GTGACCAGACTTGCTCCCCAAGAGCTGGGCAGCGGG...ACTGCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR-3UTR CAA 90 bp ATGGGGCCCTGCTTCAGGACCGAAGAGGGCATAGTCAGCTCTGACATGGCCTCCTGCAATTCATCTTGCTaGGACTTCAGGGTGGCGTCG +
Preference number: 3 (lower is better)
Translates to: MGPCFRTEEGIVSSDMASCNSSC*DFRVAS
Trigger: CGACGCCACCCTGAAGTCCAAGCAAGATGAATTGCA...GGAGGCCATGTCAGAGCTGACTATGCCCTCTTCGGTCCTGAAGCAGGGCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR-3UTR CAA 90 bp AGGTTGAAGTTCTCAGGGTGCTCGGTGATGGCCATGTTGACAACATCCAGGGCAGCGTGGGCATCATCCTaGCGTACCTTCAGGGCCTCC +
Preference number: 3 (lower is better)
Translates to: RLKFSGCSVMAMLTTSRAAWASS*RTFRAS
Trigger: GGAGGCCCTGAAGGTACGCAAGGATGATGCCCACGC...TGCCCTGGATGTTGTCAACATGGCCATCACCGAGCACCCTGAGAACTTCAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR GCA 72 bp GATCTAGCAACCACAGGATCTAAAGCCTACGGAGGCTaGTTGGGCTGGAGCACATCGCCAGGGAGATGGGGT +
Preference number: 3 (lower is better)
Translates to: DLATTGSKAYGG*LGWSTSPGRWG
Trigger: ACCCCATCTCCCTGGCGATGTGCTCCAGCCCAAGCAGCCTCCGTAGGCTTTAGATCCTGTGGTTGCTAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR GCA 72 bp TCTGCCCAACGTGATGCTCAGGAGGTCATAGATGGCTaGGGCATTCTGCAAGCTCACTGTCCGGTCCTCCTC +
Preference number: 3 (lower is better)
Translates to: SAQRDAQEVIDG*GILQAHCPVLL
Trigger: GAGGAGGACCGGACAGTGAGCTTGCAGAATGCCGCAGCCATCTATGACCTCCTGAGCATCACGTTGGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR GCA 72 bp GCTTCCTCTCCGAGGCTGATCACCATCATGGCAAAGTaGTCTGCTTCCTCTAGCCAGCGAAGGGACCCGATG +
Preference number: 3 (lower is better)
Translates to: ASSPRLITIMAK*SASSSQRRDPM
Trigger: CATCGGGTCCCTTCGCTGGCTAGAGGAAGCAGAGCACTTTGCCATGATGGTGATCAGCCTCGGAGAGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR CCA 72 bp TCGGTGATGGCCATGTTGACAACATCCAGGGCATGCTaGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGC +
Preference number: 3 (lower is better)
Translates to: SVMAMLTTSRAC*WCFWAEKSSAS
Trigger: GCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCTGGATGTTGTCAACATGGCCATCACCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
3UTR CCA 72 bp CATCAGACCCAGGCTATGCATGATGCGCACGCCATCTaGGTTCACCGTGAGCGCCTCCTTGTACAGCTGCTT +
Preference number: 3 (lower is better)
Translates to: HQTQAMHDAHAI*VHRERLLVQLL
Trigger: AAGCAGCTGTACAAGGAGGCGCTCACGGTGAACCCAGATGGCGTGCGCATCATGCATAGCCTGGGTCTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR GCA 72 bp GGGGCCCAGCTGGTCTCAGAGGGCAAGCAGGGGCAATaGAGGAATCATCTACTAACTCCAAGTCTGAGAAGG +
Preference number: 3 (lower is better)
Translates to: GAQLVSEGKQGQ*RNHLLTPSLRR
Trigger: CCTTCTCAGACTTGGAGTTAGTAGATGATTCCTGCATTGCCCCTGCTTGCCCTCTGAGACCAGCTGGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR GCA 72 bp TGGGTGGTGAGATGTACTGGGGACAGTCCTAGAAACTaGCTACCTCCATGTTGGTGGCCCTCAAGGGACCTG +
Preference number: 3 (lower is better)
Translates to: WVVRCTGDSPRN*LPPCWWPSRDL
Trigger: CAGGTCCCTTGAGGGCCACCAACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCTCACCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR GCA 72 bp CAGGTCACGAGGGCTTCCTCTGGGCCTTTCAGCACCTaGTCCAGCTTCACCTTGGTGAACATCAGGTTGAAG +
Preference number: 3 (lower is better)
Translates to: QVTRASSGPFST*SSFTLVNIRLK
Trigger: CTTCAACCTGATGTTCACCAAGGTGAAGCTGGAGCAGGTGCTGAAAGGCCCAGAGGAAGCCCTCGTGACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR GCA 72 bp TCATGGGCATCAGGCAAAGTCAGGTGCATGCCACTCTaGTTCTTCATGGTGAGGCCCTCACCGAAGCTGCCA +
Preference number: 3 (lower is better)
Translates to: SWASGKVRCMPL*FFMVRPSPKLP
Trigger: TGGCAGCTTCGGTGAGGGCCTCACCATGAAGAAGCAGAGTGGCATGCACCTGACTTTGCCTGATGCCCATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR CCA 72 bp ACAGCAGCCGCATCTGATACAGGGGCTTGTTCTCCATaGACATGTCATCAATCCCGGCCCGTGCGTACATGC +
Preference number: 3 (lower is better)
Translates to: TAAASDTGACSP*TCHQSRPVRTC
Trigger: GCATGTACGCACGGGCCGGGATTGATGACATGTCCATGGAGAACAAGCCCCTGTATCAGATGCGGCTGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR-3UTR CAA 90 bp GCTATGCATGATGCGCACGCCATCTGGGTTCACCGTGAGCGCCTCCTTGTACAGTTGGTGAACATCAGGTaGAAGTTCTCAGGGTGCTCG +
Preference number: 3 (lower is better)
Translates to: AMHDAHAIWVHRERLLVQLVNIR*KFSGCS
Trigger: CGAGCACCCTGAGAACTTCAACCTGATGTTCACCAA...CTGTACAAGGAGGCGCTCACGGTGAACCCAGATGGCGTGCGCATCATGCATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR TCA 72 bp TGGACATGTCATCAATCCCGGCCCGTGCGTACATGCTaGTGGCATCTCGGTATGAGCCCTCCACGTAATGCA +
Preference number: 3 (lower is better)
Translates to: WTCHQSRPVRTC*WHLGMSPPRNA
Trigger: TGCATTACGTGGAGGGCTCATACCGAGATGCCATCAGCATGTACGCACGGGCCGGGATTGATGACATGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR TCA 72 bp GCAAAGTCAGGTGCATGCCACTCTGCTTCTTCATGGTaGGGCCCTCACCGAAGCTGCCATCCTTTTCTAGGC +
Preference number: 3 (lower is better)
Translates to: AKSGACHSASSW*GPHRSCHPFLG
Trigger: GCCTAGAAAAGGATGGCAGCTTCGGTGAGGGCCTCACCATGAAGAAGCAGAGTGGCATGCACCTGACTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
3UTR GCA 72 bp GGCTGGTGTGGGAGCTACATGCCCAGTGAATATACATaGTGCTTCAGACAAGCCTGCTTCCCCTCCAAGGGT +
Preference number: 3 (lower is better)
Translates to: GWCGSYMPSEYT*CFRQACFPSKG
Trigger: ACCCTTGGAGGGGAAGCAGGCTTGTCTGAAGCAGCATGTATATTCACTGGGCATGTAGCTCCCACACCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR CCA 72 bp GGGGACAGTCCTAGAAACTGCCTACCTCCATGTTGGTaGCCCTCAAGGGACCTGCATTGTAGCCTAAGACCT +
Preference number: 3 (lower is better)
Translates to: GDSPRNCLPPCW*PSRDLHCSLRP
Trigger: AGGTCTTAGGCTACAATGCAGGTCCCTTGAGGGCCACCAACATGGAGGTAGGCAGTTTCTAGGACTGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR-3UTR CAA 90 bp GCTCAAGGCTGGTGTGGGAGCTACATGCCCAGTGAATATACATGCTGCTTCAGAAGACCCCAAAGGCACTaGGTAGCAGGGGGAAAGAGC +
Preference number: 3 (lower is better)
Translates to: AQGWCGSYMPSEYTCCFRRPQRH*VAGGKS
Trigger: GCTCTTTCCCCCTGCTACCAAGTGCCTTTGGGGTCT...TCTGAAGCAGCATGTATATTCACTGGGCATGTAGCTCCCACACCAGCCTTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR-3UTR CAA 90 bp TCCTCCTGCTCCGGCACCCGGCTCAGCACCACATCTCGAGTTGCCATGGATTCGTGCAGGAGTAATGTGTaGACTCAGGGTATTAGAAAG +
Preference number: 3 (lower is better)
Translates to: SSCSGTRLSTTSRVAMDSCRSNV*TQGIRK
Trigger: CTTTCTAATACCCTGAGTCAACACATTACTCCTGCA...CGAATCCATGGCAACTCGAGATGTGGTGCTGAGCCGGGTGCCGGAGCAGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR GCA 72 bp TGGCATCTCGGTATGAGCCCTCCACGTAATGCAGTTTaGCCAGGATCAGCATGGCCTCACACATGTACTGTG +
Preference number: 3 (lower is better)
Translates to: WHLGMSPPRNAV*PGSAWPHTCTV
Trigger: CACAGTACATGTGTGAGGCCATGCTGATCCTGGGCAAACTGCATTACGTGGAGGGCTCATACCGAGATGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR CCA 72 bp ACTGGGGACAGTCCTAGAAACTGCCTACCTCCATGTTaGTGGCCCTCAAGGGACCTGCATTGTAGCCTAAGA +
Preference number: 3 (lower is better)
Translates to: TGDSPRNCLPPC*WPSRDLHCSLR
Trigger: TCTTAGGCTACAATGCAGGTCCCTTGAGGGCCACCAACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR GCA 72 bp TGGTGTGGGAGCTACATGCCCAGTGAATATACATGCTaGTTCAGACAAGCCTGCTTCCCCTCCAAGGGTTTC +
Preference number: 3 (lower is better)
Translates to: WCGSYMPSEYTC*FRQACFPSKGF
Trigger: GAAACCCTTGGAGGGGAAGCAGGCTTGTCTGAAGCAGCATGTATATTCACTGGGCATGTAGCTCCCACACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR-3UTR CAA 90 bp TGGGTGGTGAGATGTACTGGGGACAGTCCTAGAAACTGCCTACCTCCATGTTGGAAAGAACTCTCCTCCTaGCCCATGAACTCAGGCAGA +
Preference number: 3 (lower is better)
Translates to: WVVRCTGDSPRNCLPPCWKELSS*PMNSGR
Trigger: TCTGCCTGAGTTCATGGGCAAGGAGGAGAGTTCTTT...CCAACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCTCACCACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR TCA 72 bp CAGTTTCTTCACATTGTGACCGCCCTGGGCAAGACCTaGGAGAGATCCAGAAGTCTGTACTGTGCTGAGAGT +
Preference number: 3 (lower is better)
Translates to: QFLHIVTALGKT*ERSRSLYCAES
Trigger: ACTCTCAGCACAGTACAGACTTCTGGATCTCTCTCAGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR TCA 72 bp GCTTTGATGACAAAAGCCTCCGACAGCAGCCGCATCTaGTACAGGGGCTTGTTCTCCATGGACATGTCATCA +
Preference number: 3 (lower is better)
Translates to: ALMTKASDSSRI*YRGLFSMDMSS
Trigger: TGATGACATGTCCATGGAGAACAAGCCCCTGTATCAGATGCGGCTGCTGTCGGAGGCTTTTGTCATCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR GCA 72 bp AGTCAAGCGGGTGACAGCCTTTCAGATGCCTCGACGTaGTGTTATTTGTGGTCTTCTCCAATTCCTGCAGGA +
Preference number: 3 (lower is better)
Translates to: SQAGDSLSDAST*CYLWSSPIPAG
Trigger: TCCTGCAGGAATTGGAGAAGACCACAAATAACAGCACGTCGAGGCATCTGAAAGGCTGTCACCCGCTTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR CCA 72 bp AGCCCTCCACGTAATGCAGTTTGCCCAGGATCAGCATaGCCTCACACATGTACTGTGGTTTGGAATAGCTCT +
Preference number: 3 (lower is better)
Translates to: SPPRNAVCPGSA*PHTCTVVWNSS
Trigger: AGAGCTATTCCAAACCACAGTACATGTGTGAGGCCATGCTGATCCTGGGCAAACTGCATTACGTGGAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR CCA 72 bp CCAGGATCAGCATGGCCTCACACATGTACTGTGGTTTaGAATAGCTCTTTAAAAATCAGCTGGGCGCAGTGC +
Preference number: 3 (lower is better)
Translates to: PGSAWPHTCTVV*NSSLKISWAQC
Trigger: GCACTGCGCCCAGCTGATTTTTAAAGAGCTATTCCAAACCACAGTACATGTGTGAGGCCATGCTGATCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR GCA 72 bp ATGCCCAGTGAATATACATGCTGCTTCAGACAAGCCTaGTTCCCCTCCAAGGGTTTCTTTATTCAACCTGCA +
Preference number: 3 (lower is better)
Translates to: MPSEYTCCFRQA*FPSKGFFIQPA
Trigger: TGCAGGTTGAATAAAGAAACCCTTGGAGGGGAAGCAGGCTTGTCTGAAGCAGCATGTATATTCACTGGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
3UTR TCA 72 bp CTGCATTGTAGCCTAAGACCTGCAGGAGTAATGTGTTaGCTCAGGGTATTAGAAAGGACTGGATCTAGCAAC +
Preference number: 3 (lower is better)
Translates to: LHCSLRPAGVMC*LRVLERTGSSN
Trigger: GTTGCTAGATCCAGTCCTTTCTAATACCCTGAGTCAACACATTACTCCTGCAGGTCTTAGGCTACAATGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp TCGCGGCCATCAGGGGCACGGTGGGGTCCGAGGGCCGCAACTTCACACACTCCCGTCCGGTCCTCCTCCTaGTCCGGCACCCGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SRPSGARWGPRAATSHTPVRSSS*SGTRLS
Trigger: GCTGAGCCGGGTGCCGGAGCAGGAGGAGGACCGGAC...GGGAGTGTGTGAAGTTGCGGCCCTCGGACCCCACCGTGCCCCTGATGGCCGCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR TCA 90 bp TGGCCTCCTCCAGCCGGGAGGCGGCGATGGACGAAGCCCGCCGGGAGCCAGAGTGACCCAGGCTATGCATaGTGCGCACGCCATCTGGGT +
Preference number: 4 (lower is better)
Translates to: WPPPAGRRRWTKPAGSQSDPGYA*CARHLG
Trigger: ACCCAGATGGCGTGCGCATCATGCATAGCCTGGGTC...ACTCTGGCTCCCGGCGGGCTTCGTCCATCGCCGCCTCCCGGCTGGAGGAGGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR TCA 90 bp CCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCTGCTGAGGCCCCGCACCTaGTGCCACTGTTGCCCCACC +
Preference number: 4 (lower is better)
Translates to: PEAPHLMPLLPHPDPRSLLRPRT*CHCCPT
Trigger: GGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAG...CAGGGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCTCCGCCGCCGGGCATaGTCAGCGTCTGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSLRRRA*SASAAA
Trigger: GGCAGCTGCAGACGCTGAGCATGCCCGGCGGCGGAG...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000394850.6
CDS-3UTR GCA 90 bp ACTGGGCGCCAGCTGCTGAGCCCTCTCCAGCGTCTGCAGTGCCTTCCGGTGCAAGTCCGGTCCTCCTCCTaGTCCGGCACCCGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: TGRQLLSPLQRLQCLPVQVRSSS*SGTRLS
Trigger: GCTGAGCCGGGTGCCGGAGCAGGAGGAGGACCGGAC...TTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGCTCAGCAGCTGGCGCCCAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR CCA 90 bp CTCCTCCAGCCGGGAGGCGGCGATGGACGAAGCCCGCCGGGAGCCAGAGTCTGCGTACTGAGTGAGAAGTaGGGAAGAGGCCCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: LLQPGGGDGRSPPGARVCVLSEK*GRGPPP
Trigger: AGGCGGCGGGCCTCTTCCCCACTTCTCACTCAGTAC...GCAGACTCTGGCTCCCGGCGGGCTTCGTCCATCGCCGCCTCCCGGCTGGAGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp ACCCGATGCAGACCTTCGCGGCCATCAGGGGCACGGTGGGGTCCGAGGGCCGCAGGCCTGGCTCAAGGCTaGTGTGGGAGCTACATGCCC +
Preference number: 4 (lower is better)
Translates to: TRCRPSRPSGARWGPRAAGLAQG*CGSYMP
Trigger: GGGCATGTAGCTCCCACACCAGCCTTGAGCCAGGCC...TGCGGCCCTCGGACCCCACCGTGCCCCTGATGGCCGCGAAGGTCTGCATCGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR TCA 90 bp CAGCTGCAGCGAGACATAGAGGATGACCTGGGGGTCACTGGGCGCCAGCTGCTGCTGGGCGCCAGCTGCTaGGCCCTCTCCAGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: QLQRDIEDDLGVTGRQLLLGASC*ALSSVC
Trigger: GCAGACGCTGGAGAGGGCTCAGCAGCTGGCGCCCAG...CAGCAGCTGGCGCCCAGTGACCCCCAGGTCATCCTCTATGTCTCGCTGCAGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR GCA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCACGCTGCGCTCGGGCTaGCTCGCCTGTTACCTCCGC +
Preference number: 4 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSTLRSG*LACYLR
Trigger: GCGGAGGTAACAGGCGAGGCAGCCCGAGCGCAGCGT...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000394850.6
CDS-3UTR GCA 90 bp CTCCTCCAGCCGGGAGGCGGCGATGGACGAAGCCCGCCGGGAGCCAGAGTCTGCTCGTGGCACGTACTCTaGCTCTCCACGGCATCACGA +
Preference number: 4 (lower is better)
Translates to: LLQPGGGDGRSPPGARVCSWHVL*LSTASR
Trigger: TCGTGATGCCGTGGAGAGGCAGAGTACGTGCCACGA...GCAGACTCTGGCTCCCGGCGGGCTTCGTCCATCGCCGCCTCCCGGCTGGAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCACCTCGCCCAGGCCCTaGCACGCCTCGTGGCACGTA +
Preference number: 4 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSTSPRP*HASWHV
Trigger: TACGTGCCACGAGGCGTGGCAGGGCCTGGGCGAGGT...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCACGGCAGCCTCGTTCTaGCCCTGGGCCTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSTAASF*PWACST
Trigger: GGTGCTGCAGGCCCAGGGCCAGAACGAGGCTGCCGT...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp CCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCTGTCCTGCAGGAACACCTaGGCGATCCAGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: PEAPHLMPLLPHPDPRSLSCRNT*AIQEAL
Trigger: GAGGGCCTCCTGGATCGCTCAGGTGTTCCTGCAGGA...CAGGGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp CCAGCGAAGGGACCCGATGCAGACCTTCGCGGCCATCAGGGGCACGGTGGGGTCGGTTTCCGCAGGGCCTaGGTGGCGAAAGAACTCTCC +
Preference number: 4 (lower is better)
Translates to: PAKGPDADLRGHQGHGGVGFRRA*VAKELS
Trigger: GGAGAGTTCTTTCGCCACTCAGGCCCTGCGGAAACC...GACCCCACCGTGCCCCTGATGGCCGCGAAGGTCTGCATCGGGTCCCTTCGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR TCA 90 bp TCCTCCTGCTCCGGCACCCGGCTCAGCACCACATCTCGAGTTGCCATGGATTCGCTGGGCGCCAGCTGCTaGGCCCTCTCCAGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: SSCSGTRLSTTSRVAMDSLGASC*ALSSVC
Trigger: GCAGACGCTGGAGAGGGCTCAGCAGCTGGCGCCCAG...CGAATCCATGGCAACTCGAGATGTGGTGCTGAGCCGGGTGCCGGAGCAGGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR TCA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCACTGTTGCCCCACCCTaGCCCACGTTCCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSTVAPP*PTFPAA
Trigger: GGCAGCAGGGAACGTGGGTCAGGGTGGGGCAACAGT...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTGGACCAGCTCCGGCATaGGGTCCCAGTGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRGPAPA*GPSGPR
Trigger: CCGAGGGCCACTGGGACCGCATGCCGGAGCTGGTCC...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000394850.6
CDS-3UTR GCA 90 bp GGGTGGGTGGAGATGGAAGTGTTAGGGCCGGTGCTCAGTACCCCTGGTCAGACCGTCCGGTCCTCCTCCTaGTCCGGCACCCGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GWVEMEVLGPVLSTPGQTVRSSS*SGTRLS
Trigger: GCTGAGCCGGGTGCCGGAGCAGGAGGAGGACCGGAC...GGTCTGACCAGGGGTACTGAGCACCGGCCCTAACACTTCCATCTCCACCCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp CCAGCGAAGGGACCCGATGCAGACCTTCGCGGCCATCAGGGGCACGGTGGGGTCGCCCTCTCCAGCGTCTaGAGTGCCTTCCGGTGCAAT +
Preference number: 4 (lower is better)
Translates to: PAKGPDADLRGHQGHGGVALSSV*SAFRCN
Trigger: ATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGC...GACCCCACCGTGCCCCTGATGGCCGCGAAGGTCTGCATCGGGTCCCTTCGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp CCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCTGAGGGCAGTACAGGGCTaGTGGCCTCCAGCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: PEAPHLMPLLPHPDPRSLRAVQG*WPPAQG
Trigger: CCCTTGAGCTGGAGGCCAGCAGCCCTGTACTGCCCT...CAGGGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCACCCACGTTCCCTGCTaGCTCTCCCTCTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSTHVPC*LSLWPA
Trigger: GGCTGGCCAGAGGGAGAGGCAGCAGGGAACGTGGGT...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp CCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCTGAACGGGGACAGCGGCTaGCGCAGCTTGTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: PEAPHLMPLLPHPDPRSLNGDSG*RSLCSG
Trigger: TCCACTGCACAAGCTGCGGCAGCCGCTGTCCCCGTT...CAGGGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409245.5
CDS-3UTR CCA 90 bp CAGCTGCAGCGAGACATAGAGGATGACCTGGGGGTCACTGGGCGCCAGCTGCTGCCATCAGGGGCACGGTaGGGTCCGAGGGCCGCAACT +
Preference number: 4 (lower is better)
Translates to: QLQRDIEDDLGVTGRQLLPSGAR*GPRAAT
Trigger: AGTTGCGGCCCTCGGACCCCACCGTGCCCCTGATGG...CAGCAGCTGGCGCCCAGTGACCCCCAGGTCATCCTCTATGTCTCGCTGCAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR CCA 90 bp GAAGGGACCCGATGCAGACCTTCGCGGCCATCAGGGGCACGGTGGGGTCCGAGGGCTGCTCCATGGCACTaGAGATCTGTCGGACGAGGG +
Preference number: 4 (lower is better)
Translates to: EGTRCRPSRPSGARWGPRAAPWH*RSVGRG
Trigger: CCCTCGTCCGACAGATCTCCAGTGCCATGGAGCAGC...CCTCGGACCCCACCGTGCCCCTGATGGCCGCGAAGGTCTGCATCGGGTCCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp CCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCTGAGCAGTGCCAGCAGGTaGAGGGCGTGGGCATCATCC +
Preference number: 4 (lower is better)
Translates to: PEAPHLMPLLPHPDPRSLSSASR*RAWASS
Trigger: GGATGATGCCCACGCCCTCCACCTGCTGGCACTGCT...CAGGGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp CCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCTGAGGCCCGCCGCCTCCTaGATGCAGAAACCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: PEAPHLMPLLPHPDPRSLRPAAS*MQKPAS
Trigger: GGAAGCAGGTTTCTGCATCCAGGAGGCGGCGGGCCT...CAGGGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp ACCCGATGCAGACCTTCGCGGCCATCAGGGGCACGGTGGGGTCCGAGGGCCGCATCACGAAGCACCTTCTaGGCCAAGCTCTTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: TRCRPSRPSGARWGPRAASRSTF*AKLLWP
Trigger: GGGCCACAAGAGCTTGGCCCAGAAGGTGCTTCGTGA...TGCGGCCCTCGGACCCCACCGTGCCCCTGATGGCCGCGAAGGTCTGCATCGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR TCA 90 bp CCAGCGAAGGGACCCGATGCAGACCTTCGCGGCCATCAGGGGCACGGTGGGGTCCCCGTGCGTACATGCTaGTGGCATCTCGGTATGAGC +
Preference number: 4 (lower is better)
Translates to: PAKGPDADLRGHQGHGGVPVRTC*WHLGMS
Trigger: GCTCATACCGAGATGCCATCAGCATGTACGCACGGG...GACCCCACCGTGCCCCTGATGGCCGCGAAGGTCTGCATCGGGTCCCTTCGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR TCA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCTCCTGCAGGAACACCTaGGCGATCCAGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSSCRNT*AIQEAL
Trigger: GAGGGCCTCCTGGATCGCTCAGGTGTTCCTGCAGGA...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp CCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCTGTCTCCTCCTTGCCCATaGACTCAGGCAGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PEAPHLMPLLPHPDPRSLSPPCP*TQAEGG
Trigger: CCCACCCTCTGCCTGAGTTCATGGGCAAGGAGGAGA...CAGGGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp ATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACTGGGCGCCAGCTGCTaGGCCCTCTCCAGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: MYFPEAPHLMPLLPHPDPLGASC*ALSSVC
Trigger: GCAGACGCTGGAGAGGGCTCAGCAGCTGGCGCCCAG...TGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCGCGAGACATAGAGGATaGCCTGGGGGTCACTGGGCG +
Preference number: 4 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSARHRG*PGGHWA
Trigger: CGCCCAGTGACCCCCAGGTCATCCTCTATGTCTCGC...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp TCCAGGGCATGCTGGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGGTGGCTGAGGCCCCGCACCTaGTGCCACTGTTGCCCCACC +
Preference number: 4 (lower is better)
Translates to: SRACWWCFWAEKSSASRWLRPRT*CHCCPT
Trigger: GGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAG...CCACCTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR TCA 90 bp GGGTGGGTGGAGATGGAAGTGTTAGGGCCGGTGCTCAGTACCCCTGGTCAGACCGGTGAAGGACAGCTGTaGGGCTCCCCGCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GWVEMEVLGPVLSTPGQTGEGQL*GSPLPS
Trigger: GCTGGGCAGCGGGGAGCCTCACAGCTGTCCTTCACC...GGTCTGACCAGGGGTACTGAGCACCGGCCCTAACACTTCCATCTCCACCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp CAAAGGCACTTGGTAGCAGGGGGAAAGAGCAAGGTGGGGCCCAGCTGGTCTCAGCTCCGCCGCCGGGCATaGTCAGCGTCTGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: QRHLVAGGKSKVGPSWSQLRRRA*SASAAA
Trigger: GGCAGCTGCAGACGCTGAGCATGCCCGGCGGCGGAG...CTGAGACCAGCTGGGCCCCACCTTGCTCTTTCCCCCTGCTACCAAGTGCCTTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000394850.6
CDS-3UTR GCA 90 bp GGCTCGCTCCAGGCACTCCGAGAGCATGACGTACTGTCCCCTTCTGCCCAACGTACGCTGCGCTCGGGCTaGCTCGCCTGTTACCTCCGC +
Preference number: 4 (lower is better)
Translates to: GSLQALREHDVLSPSAQRTLRSG*LACYLR
Trigger: GCGGAGGTAACAGGCGAGGCAGCCCGAGCGCAGCGT...ACGTTGGGCAGAAGGGGACAGTACGTCATGCTCTCGGAGTGCCTGGAGCGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441914.5
CDS-3UTR GCA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCAGGACCCCCGCCAGGTaGTTGGCCGCCATCACTTTG +
Preference number: 4 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSRTPAR*LAAITL
Trigger: CAAAGTGATGGCGGCCAAGCACCTGGCGGGGGTCCT...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp ATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCAGTCCGGTCCTCCTCCTaGTCCGGCACCCGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: MYFPEAPHLMPLLPHPDPVRSSS*SGTRLS
Trigger: GCTGAGCCGGGTGCCGGAGCAGGAGGAGGACCGGAC...TGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp CCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCTGGCCCTCTCCAGCGTCTaGAGTGCCTTCCGGTGCAAT +
Preference number: 4 (lower is better)
Translates to: PEAPHLMPLLPHPDPRSLALSSV*SAFRCN
Trigger: ATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGC...CAGGGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp TCGCGGCCATCAGGGGCACGGTGGGGTCCGAGGGCCGCAACTTCACACACTCCCGCCTCAGCACTTGTCTaGAGGTCACGAGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SRPSGARWGPRAATSHTPASALV*RSRGLP
Trigger: AGGAAGCCCTCGTGACCTGCAGACAAGTGCTGAGGC...GGGAGTGTGTGAAGTTGCGGCCCTCGGACCCCACCGTGCCCCTGATGGCCGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCAGCTGCATGGGGCCCTaGTTCAGGACCGAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSSCMGP*FRTEEG
Trigger: GCCCTCTTCGGTCCTGAAGCAGGGCCCCATGCAGCT...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp GGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGGTGGAGGGCGTGGGCATCTCCCTCCCTGCGGCTaGAGCGTCGTCAGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: GGASGQRRAVPAGGGRGHLPPCG*SVVRAL
Trigger: GAGAGCTCTGACGACGCTGCAGCCGCAGGGAGGGAG...ATGCCCACGCCCTCCACCTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR CCA 90 bp AAGGTGGCCCATCAGCAATGCCCGAGGGGATCTCTGTTCAGACGTGAGTCCTGCCCGGGCGGCGGAGGGTaGGCAGCAGCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: KVAHQQCPRGSLFRRESCPGGGG*AAAAAA
Trigger: TGCTGCTGCTGCTGCTGCCCACCCTCCGCCGCCCGG...GCAGGACTCACGTCTGAACAGAGATCCCCTCGGGCATTGCTGATGGGCCACCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319190.11
CDS-3UTR CCA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCGGGCGGCGGAGGGTaGGCAGCAGCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDPGGGG*AAAAAA
Trigger: TGCTGCTGCTGCTGCTGCCCACCCTCCGCCGCCCGG...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000394850.6
CDS-3UTR CCA 90 bp GGCTCGCTCCAGGCACTCCGAGAGCATGACGTACTGTCCCCTTCTGCCCAACGTCCATCAGGGGCACGGTaGGGTCCGAGGGCCGCAACT +
Preference number: 4 (lower is better)
Translates to: GSLQALREHDVLSPSAQRPSGAR*GPRAAT
Trigger: AGTTGCGGCCCTCGGACCCCACCGTGCCCCTGATGG...ACGTTGGGCAGAAGGGGACAGTACGTCATGCTCTCGGAGTGCCTGGAGCGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp CGCCAGCTGCTGAGCCCTCTCCAGCGTCTGCAGTGCCTTCCGGTGCAATTCATCCCATCAGGGGCACGGTaGGGTCCGAGGGCCGCAACT +
Preference number: 4 (lower is better)
Translates to: RQLLSPLQRLQCLPVQFIPSGAR*GPRAAT
Trigger: AGTTGCGGCCCTCGGACCCCACCGTGCCCCTGATGG...GATGAATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGCTCAGCAGCTGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR CCA 90 bp CCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCTGGTACTGAGTGAGAAGTaGGGAAGAGGCCCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: PEAPHLMPLLPHPDPRSLVLSEK*GRGPPP
Trigger: AGGCGGCGGGCCTCTTCCCCACTTCTCACTCAGTAC...CAGGGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp CAGCTGCAGCGAGACATAGAGGATGACCTGGGGGTCACTGGGCGCCAGCTGCTGCCCTGCCACGCCTCGTaGCACGTACTCTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: QLQRDIEDDLGVTGRQLLPCHAS*HVLCLS
Trigger: GGAGAGGCAGAGTACGTGCCACGAGGCGTGGCAGGG...CAGCAGCTGGCGCCCAGTGACCCCCAGGTCATCCTCTATGTCTCGCTGCAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp GGGTGGGTGGAGATGGAAGTGTTAGGGCCGGTGCTCAGTACCCCTGGTCAGACCACGGCAGCCTCGTTCTaGCCCTGGGCCTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: GWVEMEVLGPVLSTPGQTTAASF*PWACST
Trigger: GGTGCTGCAGGCCCAGGGCCAGAACGAGGCTGCCGT...GGTCTGACCAGGGGTACTGAGCACCGGCCCTAACACTTCCATCTCCACCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp GGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGGTGGAGGGCGTGGGCATGCAGTACAGGGCTGCTaGCCTCCAGCTCAAGGGCGG +
Preference number: 4 (lower is better)
Translates to: GGASGQRRAVPAGGGRGHAVQGC*PPAQGR
Trigger: CCGCCCTTGAGCTGGAGGCCAGCAGCCCTGTACTGC...ATGCCCACGCCCTCCACCTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCGGAGGCTGCTTGGGCTaGAGCACATCGCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSGGCLG*STSPGR
Trigger: TCTCCCTGGCGATGTGCTCCAGCCCAAGCAGCCTCC...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp GGGCGCCAGCTGCTGAGCCCTCTCCAGCGTCTGCAGTGCCTTCCGGTGCAATTCCTTCAGGGGTCGCCCTaGACAGGTCAGAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GRQLLSPLQRLQCLPVQFLQGSP*TGQRPG
Trigger: TCCTGGCCTCTGACCTGTCCAGGGCGACCCCTGAAG...GAATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGCTCAGCAGCTGGCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR CAA 72 bp TCCCTCTCTGTCAGGCGGAAGCGGGAGGCGATGGAGTaGGGTAGGCGTTCCAGAGAGAGGCCTCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SLSVRRKREAME*GRRSRERPPLQ
Trigger: CTGCAGGGGAGGCCTCTCTCTGGAACGCCTACCCAACTCCATCGCCTCCCGCTTCCGCCTGACAGAGAGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR TCA 90 bp CCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCTGGACAGCAGCCGCATCTaGTACAGGGGCTTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: PEAPHLMPLLPHPDPRSLDSSRI*YRGLFS
Trigger: GGAGAACAAGCCCCTGTATCAGATGCGGCTGCTGTC...CAGGGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp GCCGGCCCCGCATATAGAGTACTGAGTGAGAAGTGGGGAAGAGGCCCGCCGCCTTCCTGCAGGAACACCTaGGCGATCCAGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: AGPAYRVLSEKWGRGPPPSCRNT*AIQEAL
Trigger: GAGGGCCTCCTGGATCGCTCAGGTGTTCCTGCAGGA...AGGCGGCGGGCCTCTTCCCCACTTCTCACTCAGTACTCTATATGCGGGGCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR TCA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCTCTCCTCCTTGCCCATaGACTCAGGCAGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSSPPCP*TQAEGG
Trigger: CCCACCCTCTGCCTGAGTTCATGGGCAAGGAGGAGA...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp ACTGGGCGCCAGCTGCTGAGCCCTCTCCAGCGTCTGCAGTGCCTTCCGGTGCAACCTGCAGGCTATAGGTaGGACCCAGAGCCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: TGRQLLSPLQRLQCLPVQPAGYR*DPEPGS
Trigger: GCTACCTGGCTCTGGGTCTCACCTATAGCCTGCAGG...TTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGCTCAGCAGCTGGCGCCCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR TCA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCTGGGCGCCAGCTGCTaGGCCCTCTCCAGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDLGASC*ALSSVC
Trigger: GCAGACGCTGGAGAGGGCTCAGCAGCTGGCGCCCAG...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp GGGTGCTCGGTGATGGCCATGTTGACAACATCCAGGGCATGCTGGTGGTGCTTCCTGGGCGCCAGCTGCTaGGCCCTCTCCAGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: GCSVMAMLTTSRACWWCFLGASC*ALSSVC
Trigger: GCAGACGCTGGAGAGGGCTCAGCAGCTGGCGCCCAG...GAAGCACCACCAGCATGCCCTGGATGTTGTCAACATGGCCATCACCGAGCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR TCA 90 bp GAGCAGTGCCAGCAGGTGGAGGGCGTGGGCATCATCCTTGCGTACCTTCAGGGCGCGAGACATAGAGGATaGCCTGGGGGTCACTGGGCG +
Preference number: 4 (lower is better)
Translates to: EQCQQVEGVGIILAYLQGARHRG*PGGHWA
Trigger: CGCCCAGTGACCCCCAGGTCATCCTCTATGTCTCGC...GCCCTGAAGGTACGCAAGGATGATGCCCACGCCCTCCACCTGCTGGCACTGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR TCA 90 bp CCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCTGTCTGCTTCTTCATGGTaGGGCCCTCACCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: PEAPHLMPLLPHPDPRSLSASSW*GPHRSC
Trigger: GCAGCTTCGGTGAGGGCCTCACCATGAAGAAGCAGA...CAGGGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp CTCCTCCAGCCGGGAGGCGGCGATGGACGAAGCCCGCCGGGAGCCAGAGTCTGCCCGCATATAGAGTACTaGGTGAGAAGTGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: LLQPGGGDGRSPPGARVCPHIEY*VRSGEE
Trigger: CTCTTCCCCACTTCTCACTCAGTACTCTATATGCGG...GCAGACTCTGGCTCCCGGCGGGCTTCGTCCATCGCCGCCTCCCGGCTGGAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR TCA 90 bp CCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCTGCATCTGGGTTCACCGTaGGCGCCTCCTTGTACAGCT +
Preference number: 4 (lower is better)
Translates to: PEAPHLMPLLPHPDPRSLHLGSP*APPCTA
Trigger: AGCTGTACAAGGAGGCGCTCACGGTGAACCCAGATG...CAGGGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp CCAGCGAAGGGACCCGATGCAGACCTTCGCGGCCATCAGGGGCACGGTGGGGTCGCCAAAAGGCCAGGGTaGGGCTCGAATCAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: PAKGPDADLRGHQGHGGVAKRPG*GSNQGK
Trigger: TTTGCCTTGATTCGAGCCTCACCCTGGCCTTTTGGC...GACCCCACCGTGCCCCTGATGGCCGCGAAGGTCTGCATCGGGTCCCTTCGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR TCA 90 bp GAAGGGACCCGATGCAGACCTTCGCGGCCATCAGGGGCACGGTGGGGTCCGAGGATAGGCCTGGGGGACTaGCTCCTTGGAGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: EGTRCRPSRPSGARWGPRIGLGD*LLGEEF
Trigger: GAACTCTTCTCCAAGGAGTCAGTCCCCCAGGCCTAT...CCTCGGACCCCACCGTGCCCCTGATGGCCGCGAAGGTCTGCATCGGGTCCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR GCA 90 bp CCCTCACCGAAGCTGCCATCCTTTTCTAGGCCTCCCAGCTGGGAGAAGCTGTACGGACCAGCTCCGGCATaGGGTCCCAGTGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: PSPKLPSFSRPPSWEKLYGPAPA*GPSGPR
Trigger: CCGAGGGCCACTGGGACCGCATGCCGGAGCTGGTCC...GTACAGCTTCTCCCAGCTGGGAGGCCTAGAAAAGGATGGCAGCTTCGGTGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441914.5
CDS-3UTR GCA 90 bp CAGCTGCTGAGCCCTCTCCAGCGTCTGCAGTGCCTTCCGGTGCAATTCATCTTGCTCCGCCGCCGGGCATaGTCAGCGTCTGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: QLLSPLQRLQCLPVQFILLRRRA*SASAAA
Trigger: GGCAGCTGCAGACGCTGAGCATGCCCGGCGGCGGAG...CAAGATGAATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGCTCAGCAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441914.5
CDS-3UTR GCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCTCACTCAGGGAGTaGAGCAGGACCCCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRSSLRE*SRTPAR
Trigger: CCTGGCGGGGGTCCTGCTGCACTCCCTGAGTGAGGA...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCGCTGCTCCATGGCACTaGAGATCTGTCGGACGAGGG +
Preference number: 4 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSAAPWH*RSVGRG
Trigger: CCCTCGTCCGACAGATCTCCAGTGCCATGGAGCAGC...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp CCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCTGTGCTGGTGGTGCTTCTaGGCAGAGAAGAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: PEAPHLMPLLPHPDPRSLCWWCF*AEKSSA
Trigger: GGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCA...CAGGGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCACGAGGGCTTCCTCTaGGCCTTTCAGCACCTGCTC +
Preference number: 4 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSHEGFL*AFQHLL
Trigger: GAGCAGGTGCTGAAAGGCCCAGAGGAAGCCCTCGTG...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp GACCTTCGCGGCCATCAGGGGCACGGTGGGGTCCGAGGGCCGCAACTTCACACATCTAGGCCTCCCAGCTaGGAGAAGCTGTACAGGGTC +
Preference number: 4 (lower is better)
Translates to: DLRGHQGHGGVRGPQLHTSRPPS*EKLYRV
Trigger: GACCCTGTACAGCTTCTCCCAGCTGGGAGGCCTAGA...TGTGTGAAGTTGCGGCCCTCGGACCCCACCGTGCCCCTGATGGCCGCGAAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp AGCAGTGCCAGCAGGTGGAGGGCGTGGGCATCATCCTTGCGTACCTTCAGGGCCGATGCGCACGCCATCTaGGTTCACCGTGAGCGCCTC +
Preference number: 4 (lower is better)
Translates to: SSASRWRAWASSLRTFRADAHAI*VHRERL
Trigger: GAGGCGCTCACGGTGAACCCAGATGGCGTGCGCATC...GGCCCTGAAGGTACGCAAGGATGATGCCCACGCCCTCCACCTGCTGGCACTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp GAGCAGTGCCAGCAGGTGGAGGGCGTGGGCATCATCCTTGCGTACCTTCAGGGCGATGCGCACGCCATCTaGGTTCACCGTGAGCGCCTC +
Preference number: 4 (lower is better)
Translates to: EQCQQVEGVGIILAYLQGDAHAI*VHRERL
Trigger: GAGGCGCTCACGGTGAACCCAGATGGCGTGCGCATC...GCCCTGAAGGTACGCAAGGATGATGCCCACGCCCTCCACCTGCTGGCACTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp CCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCTGTCACGAAGCACCTTCTaGGCCAAGCTCTTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: PEAPHLMPLLPHPDPRSLSRSTF*AKLLWP
Trigger: GGGCCACAAGAGCTTGGCCCAGAAGGTGCTTCGTGA...CAGGGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTCCCTGCCACGCCTCGTaGCACGTACTCTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRPCHAS*HVLCLS
Trigger: GGAGAGGCAGAGTACGTGCCACGAGGCGTGGCAGGG...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTGCAGTACAGGGCTGCTaGCCTCCAGCTCAAGGGCGG +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRAVQGC*PPAQGR
Trigger: CCGCCCTTGAGCTGGAGGCCAGCAGCCCTGTACTGC...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp GCCGCAACTTCACACACTCCCGCAGCAGGGACACAGCGTAGGCTGACTTCCCACGCAGTACAGGGCTGCTaGCCTCCAGCTCAAGGGCGG +
Preference number: 4 (lower is better)
Translates to: AATSHTPAAGTQRRLTSHAVQGC*PPAQGR
Trigger: CCGCCCTTGAGCTGGAGGCCAGCAGCCCTGTACTGC...GTGGGAAGTCAGCCTACGCTGTGTCCCTGCTGCGGGAGTGTGTGAAGTTGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCCGCAGCTTGTGCAGTaGAGCTGGCAGACGCTGGAA +
Preference number: 4 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSPQLVQ*SWQTLE
Trigger: TTCCAGCGTCTGCCAGCTCCACTGCACAAGCTGCGG...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409245.5
3UTR CAA 72 bp AGCAGTGCCAGCAGGTGGAGGGCGTGGGCATCATCCTaGCGTACCTTCAGGGCCTCCTGCAGCTGCTCCATG +
Preference number: 4 (lower is better)
Translates to: SSASRWRAWASS*RTFRASCSCSM
Trigger: CATGGAGCAGCTGCAGGAGGCCCTGAAGGTACGCAAGGATGATGCCCACGCCCTCCACCTGCTGGCACTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR TCA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCGGTGTCCGGAAAGGTaGACGCTGCGCTCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDRCPER*TLRSGC
Trigger: GCAGCCCGAGCGCAGCGTTCACCTTTCCGGACACCG...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000394850.6
CDS-3UTR TCA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCGGACACAGCGTAGGCTaGCTTCCCACAAGCCACCAT +
Preference number: 4 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSGHSVG*LPTSHH
Trigger: ATGGTGGCTTGTGGGAAGTCAGCCTACGCTGTGTCC...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTGCGAGACATAGAGGATaGCCTGGGGGTCACTGGGCG +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRARHRG*PGGHWA
Trigger: CGCCCAGTGACCCCCAGGTCATCCTCTATGTCTCGC...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTGGGCATAGTCAGCTCTaGCATGGCCTCCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRGHSQL*HGLLQP
Trigger: CGGCTGGAGGAGGCCATGTCAGAGCTGACTATGCCC...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp TCCACGGCATCACGAAGCACCTTCTGGGCCAAGCTCTTGTGGCCCAGCCGACTCGGGCATAGTCAGCTCTaGCATGGCCTCCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: STASRSTFWAKLLWPSRLGHSQL*HGLLQP
Trigger: CGGCTGGAGGAGGCCATGTCAGAGCTGACTATGCCC...GAGTCGGCTGGGCCACAAGAGCTTGGCCCAGAAGGTGCTTCGTGATGCCGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR TCA 90 bp CCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCTGCGGGAAATGCAGTGCTaGGCTAGTGTGCCATGGATG +
Preference number: 4 (lower is better)
Translates to: PEAPHLMPLLPHPDPRSLREMQC*ASVPWM
Trigger: CATCCATGGCACACTAGCTCAGCACTGCATTTCCCG...CAGGGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGGACCAGCTCCGGCATaGGGTCCCAGTGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPGPAPA*GPSGPR
Trigger: CCGAGGGCCACTGGGACCGCATGCCGGAGCTGGTCC...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000394850.6
CDS-3UTR GCA 90 bp AAGGCACTTGGTAGCAGGGGGAAAGAGCAAGGTGGGGCCCAGCTGGTCTCAGAGGGCATGCTCAGCGTCTaGAGCTGCCGGACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KALGSRGKEQGGAQLVSEGMLSV*SCRTSS
Trigger: GGAGCTGGTCCGGCAGCTGCAGACGCTGAGCATGCC...CTCTGAGACCAGCTGGGCCCCACCTTGCTCTTTCCCCCTGCTACCAAGTGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000394850.6
CDS-3UTR GCA 90 bp CAAAGGCACTTGGTAGCAGGGGGAAAGAGCAAGGTGGGGCCCAGCTGGTCTCAGCGGAAAGGTGAACGCTaGGCTCGGGCTGCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: QRHLVAGGKSKVGPSWSQRKGER*ARAASP
Trigger: AGGCGAGGCAGCCCGAGCGCAGCGTTCACCTTTCCG...CTGAGACCAGCTGGGCCCCACCTTGCTCTTTCCCCCTGCTACCAAGTGCCTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000394850.6
CDS-3UTR GCA 90 bp GCTCCATGGCACTGGAGATCTGTCGGACGAGGGCCAGCTGCAGCGAGACATAGATCCTCACTCAGGGAGTaGAGCAGGACCCCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: APWHWRSVGRGPAAARHRSSLRE*SRTPAR
Trigger: CCTGGCGGGGGTCCTGCTGCACTCCCTGAGTGAGGA...TCTATGTCTCGCTGCAGCTGGCCCTCGTCCGACAGATCTCCAGTGCCATGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR GCA 90 bp ATCAGCAATGCCCGAGGGGATCTCTGTTCAGACGTGAGTCCTGCCTTGGCCTCTGTCCGGTCCTCCTCCTaGTCCGGCACCCGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: ISNARGDLCSDVSPALASVRSSS*SGTRLS
Trigger: GCTGAGCCGGGTGCCGGAGCAGGAGGAGGACCGGAC...AGAGGCCAAGGCAGGACTCACGTCTGAACAGAGATCCCCTCGGGCATTGCTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR GCA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCGTGGGCATCATCCTTaGGTACCTTCAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSRGHHP*VPSGPP
Trigger: AGGAGGCCCTGAAGGTACGCAAGGATGATGCCCACG...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp GGGCGCCAGCTGCTGAGCCCTCTCCAGCGTCTGCAGTGCCTTCCGGTGCAATTCCGTGGGCATCATCCTTaGGTACCTTCAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GRQLLSPLQRLQCLPVQFRGHHP*VPSGPP
Trigger: AGGAGGCCCTGAAGGTACGCAAGGATGATGCCCACG...GAATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGCTCAGCAGCTGGCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR GCA 90 bp GGGCGCCAGCTGCTGAGCCCTCTCCAGCGTCTGCAGTGCCTTCCGGTGCAATTCAGGGCATGCTGGTGGTaGTTCTGGGCAGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GRQLLSPLQRLQCLPVQFRACWW*FWAEKS
Trigger: GCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCT...GAATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGCTCAGCAGCTGGCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR GCA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCCGGGAGCCAGAGTCTaGATCATGGGCATCAGGCAA +
Preference number: 4 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSPGARV*IMGIRQ
Trigger: TTGCCTGATGCCCATGATGCAGACTCTGGCTCCCGG...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp GAAGGGACCCGATGCAGACCTTCGCGGCCATCAGGGGCACGGTGGGGTCCGAGGGCTTCCTTGAGGTGCTaGTGCTCCATGAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: EGTRCRPSRPSGARWGPRASLRC*CSMNSS
Trigger: TGAGCTGTTCATGGAGCAGCAGCACCTCAAGGAAGC...CCTCGGACCCCACCGTGCCCCTGATGGCCGCGAAGGTCTGCATCGGGTCCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp GGGCTGCAGCTGCAGAGGCGTTCACTAAAGATGTATTTCCCTGAGGCCCCGCACACCTCGCCCAGGCCCTaGCACGCCTCGTGGCACGTA +
Preference number: 4 (lower is better)
Translates to: GLQLQRRSLKMYFPEAPHTSPRP*HASWHV
Trigger: TACGTGCCACGAGGCGTGGCAGGGCCTGGGCGAGGT...GTGCGGGGCCTCAGGGAAATACATCTTTAGTGAACGCCTCTGCAGCTGCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp AGCATCAGACCCAGGCTATGCATGATGCGCACGCCATCTGGGTTCACCGTGAGCACCTCGCCCAGGCCCTaGCACGCCTCGTGGCACGTA +
Preference number: 4 (lower is better)
Translates to: SIRPRLCMMRTPSGFTVSTSPRP*HASWHV
Trigger: TACGTGCCACGAGGCGTGGCAGGGCCTGGGCGAGGT...GCTCACGGTGAACCCAGATGGCGTGCGCATCATGCATAGCCTGGGTCTGATGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp ATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACTCCCTCCCTGCGGCTaGAGCGTCGTCAGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: MYFPEAPHLMPLLPHPDPLPPCG*SVVRAL
Trigger: GAGAGCTCTGACGACGCTGCAGCCGCAGGGAGGGAG...TGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCAAAGCCTACGGAGGCTaGTTGGGCTGGAGCACATCG +
Preference number: 4 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSKAYGG*LGWSTS
Trigger: CGATGTGCTCCAGCCCAAGCAGCCTCCGTAGGCTTT...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp CATCCAGGGCATGCTGGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGGTGGCCAGGATCAGCCCTaGCTGGACCCCTCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: HPGHAGGASGQRRAVPAGGQDQP*LDPSCL
Trigger: GAGGCAAGAGGGGTCCAGGCAGGGCTGATCCTGGCC...ACCTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCTGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR CCA 90 bp TCTCATAGTCTTCCCACTTGCCCGCAGTTTCTTCACATTGTGACCGCCCTGGGCGGTGCGGCCAAGAAGTaGAGACCCGGCCGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: SHSLPTCPQFLHIVTALGGAAKK*RPGRGR
Trigger: CCGCCCCCGGCCGGGTCTCCACTTCTTGGCCGCACC...GCCCAGGGCGGTCACAATGTGAAGAAACTGCGGGCAAGTGGGAAGACTATGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000394850.6
CDS-3UTR CCA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCATCAGGGGCACGGTaGGGTCCGAGGGCCGCAACT +
Preference number: 4 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDPSGAR*GPRAAT
Trigger: AGTTGCGGCCCTCGGACCCCACCGTGCCCCTGATGG...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp CGCCAGCTGCTGAGCCCTCTCCAGCGTCTGCAGTGCCTTCCGGTGCAATTCATCGAGCCAGGTAGCCCTTaGGGAGGAACTCCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: RQLLSPLQRLQCLPVQFIEPGSP*GGTPRL
Trigger: AAGCCGGGGAGTTCCTCCCCAAGGGCTACCTGGCTC...GATGAATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGCTCAGCAGCTGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp GGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGGTGGAGGGCGTGGGCATGCTGCTCCATGGCACTaGAGATCTGTCGGACGAGGG +
Preference number: 4 (lower is better)
Translates to: GGASGQRRAVPAGGGRGHAAPWH*RSVGRG
Trigger: CCCTCGTCCGACAGATCTCCAGTGCCATGGAGCAGC...ATGCCCACGCCCTCCACCTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR CCA 90 bp CAGCTGCAGCGAGACATAGAGGATGACCTGGGGGTCACTGGGCGCCAGCTGCTGGCTGCTCCATGGCACTaGAGATCTGTCGGACGAGGG +
Preference number: 4 (lower is better)
Translates to: QLQRDIEDDLGVTGRQLLAAPWH*RSVGRG
Trigger: CCCTCGTCCGACAGATCTCCAGTGCCATGGAGCAGC...CAGCAGCTGGCGCCCAGTGACCCCCAGGTCATCCTCTATGTCTCGCTGCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR CCA 90 bp GGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGGTGGAGGGCGTGGGCATAGCAGGTGGAGGGCGTaGGCATCATCCTTGCGTACC +
Preference number: 4 (lower is better)
Translates to: GGASGQRRAVPAGGGRGHSRWRA*ASSLRT
Trigger: GGTACGCAAGGATGATGCCCACGCCCTCCACCTGCT...ATGCCCACGCCCTCCACCTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR CCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTAGCAGTGCCAGCAGGTaGAGGGCGTGGGCATCATCC +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRSSASR*RAWASS
Trigger: GGATGATGCCCACGCCCTCCACCTGCTGGCACTGCT...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp CGCCAGCTGCTGAGCCCTCTCCAGCGTCTGCAGTGCCTTCCGGTGCAATTCATCAGCAGTGCCAGCAGGTaGAGGGCGTGGGCATCATCC +
Preference number: 4 (lower is better)
Translates to: RQLLSPLQRLQCLPVQFISSASR*RAWASS
Trigger: GGATGATGCCCACGCCCTCCACCTGCTGGCACTGCT...GATGAATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGCTCAGCAGCTGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR CCA 90 bp TCTGCTTCCTCTAGCCAGCGAAGGGACCCGATGCAGACCTTCGCGGCCATCAGGAGCAGTGCCAGCAGGTaGAGGGCGTGGGCATCATCC +
Preference number: 4 (lower is better)
Translates to: SASSSQRRDPMQTFAAIRSSASR*RAWASS
Trigger: GGATGATGCCCACGCCCTCCACCTGCTGGCACTGCT...CCTGATGGCCGCGAAGGTCTGCATCGGGTCCCTTCGCTGGCTAGAGGAAGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp ATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCAGCAGTACAGGGCTGCTaGCCTCCAGCTCAAGGGCGG +
Preference number: 4 (lower is better)
Translates to: MYFPEAPHLMPLLPHPDPAVQGC*PPAQGR
Trigger: CCGCCCTTGAGCTGGAGGCCAGCAGCCCTGTACTGC...TGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp GGCCTCCCAGCTGGGAGAAGCTGTACAGGGTCTGCCACAGCCTCAGCACTTGTCCCGCTGCCCAGCTCTTaGGGAGCAAGTCTGGTCACC +
Preference number: 4 (lower is better)
Translates to: GLPAGRSCTGSATASALVPLPSS*GASLVT
Trigger: GGTGACCAGACTTGCTCCCCAAGAGCTGGGCAGCGG...GACAAGTGCTGAGGCTGTGGCAGACCCTGTACAGCTTCTCCCAGCTGGGAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR CCA 90 bp GGGTGGGTGGAGATGGAAGTGTTAGGGCCGGTGCTCAGTACCCCTGGTCAGACCACATCCCTCCCCAGGTaGGCCCAGGTCTTGGCTTCG +
Preference number: 4 (lower is better)
Translates to: GWVEMEVLGPVLSTPGQTTSLPR*AQVLAS
Trigger: CGAAGCCAAGACCTGGGCCCACCTGGGGAGGGATGT...GGTCTGACCAGGGGTACTGAGCACCGGCCCTAACACTTCCATCTCCACCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR TCA 90 bp TGGGTGGAGATGGAAGTGTTAGGGCCGGTGCTCAGTACCCCTGGTCAGACCCCATCCTGCAGGAACACCTaGGCGATCCAGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: WVEMEVLGPVLSTPGQTPSCRNT*AIQEAL
Trigger: GAGGGCCTCCTGGATCGCTCAGGTGTTCCTGCAGGA...TGGGGTCTGACCAGGGGTACTGAGCACCGGCCCTAACACTTCCATCTCCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp GGGTGGGTGGAGATGGAAGTGTTAGGGCCGGTGCTCAGTACCCCTGGTCAGACCGGTTTCCGCAGGGCCTaGGTGGCGAAAGAACTCTCC +
Preference number: 4 (lower is better)
Translates to: GWVEMEVLGPVLSTPGQTGFRRA*VAKELS
Trigger: GGAGAGTTCTTTCGCCACTCAGGCCCTGCGGAAACC...GGTCTGACCAGGGGTACTGAGCACCGGCCCTAACACTTCCATCTCCACCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCCCTTCTGCCCAACGTaGTGCTCAGGAGGTCATAGA +
Preference number: 4 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSPFCPT*CSGGHR
Trigger: TCTATGACCTCCTGAGCATCACGTTGGGCAGAAGGG...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp CCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCTGCTTCCTCTCCGAGGCTaGTCACCATCATGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: PEAPHLMPLLPHPDPRSLLPLRG*SPSWQS
Trigger: ACTTTGCCATGATGGTGATCAGCCTCGGAGAGGAAG...CAGGGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp AGCAGTGCCAGCAGGTGGAGGGCGTGGGCATCATCCTTGCGTACCTTCAGGGCCTCTGCTTCTTCATGGTaGGGCCCTCACCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: SSASRWRAWASSLRTFRASASSW*GPHRSC
Trigger: GCAGCTTCGGTGAGGGCCTCACCATGAAGAAGCAGA...GGCCCTGAAGGTACGCAAGGATGATGCCCACGCCCTCCACCTGCTGGCACTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR TCA 90 bp GGGCTGCAGCTGCAGAGGCGTTCACTAAAGATGTATTTCCCTGAGGCCCCGCACACTGTTGCCCCACCCTaGCCCACGTTCCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GLQLQRRSLKMYFPEAPHTVAPP*PTFPAA
Trigger: GGCAGCAGGGAACGTGGGTCAGGGTGGGGCAACAGT...GTGCGGGGCCTCAGGGAAATACATCTTTAGTGAACGCCTCTGCAGCTGCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp CTTCCGGTGCAATTCATCTTGCTTGGACTTCAGGGTGGCGTCGGTGGCCTGCAGCCCCTGCAGGACCTCTaGCCACCGGGACTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: LPVQFILLGLQGGVGGLQPLQDL*PPGLCS
Trigger: GGAACACAGTCCCGGTGGTCAGAGGTCCTGCAGGGG...CTGCAGGCCACCGACGCCACCCTGAAGTCCAAGCAAGATGAATTGCACCGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR GCA 90 bp CCCTCACCGAAGCTGCCATCCTTTTCTAGGCCTCCCAGCTGGGAGAAGCTGTACGGCATGCTCAGCGTCTaGAGCTGCCGGACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PSPKLPSFSRPPSWEKLYGMLSV*SCRTSS
Trigger: GGAGCTGGTCCGGCAGCTGCAGACGCTGAGCATGCC...GTACAGCTTCTCCCAGCTGGGAGGCCTAGAAAAGGATGGCAGCTTCGGTGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441914.5
CDS-3UTR GCA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCGGAAAGGTGAACGCTaGGCTCGGGCTGCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDRKGER*ARAASP
Trigger: AGGCGAGGCAGCCCGAGCGCAGCGTTCACCTTTCCG...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000394850.6
CDS-3UTR GCA 90 bp GGTTGCCCTTCACCTCAGCCAGCCGGCCCCGCATATAGAGTACTGAGTGAGAAGCGGAAAGGTGAACGCTaGGCTCGGGCTGCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: GCPSPQPAGPAYRVLSEKRKGER*ARAASP
Trigger: AGGCGAGGCAGCCCGAGCGCAGCGTTCACCTTTCCG...CTTCTCACTCAGTACTCTATATGCGGGGCCGGCTGGCTGAGGTGAAGGGCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441914.5
CDS-3UTR GCA 90 bp CTCCTCCAGCCGGGAGGCGGCGATGGACGAAGCCCGCCGGGAGCCAGAGTCTGCTCAGATGCCTCGACGTaGTGTTATTTGTGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLQPGGGDGRSPPGARVCSDAST*CYLWSS
Trigger: AGAAGACCACAAATAACAGCACGTCGAGGCATCTGA...GCAGACTCTGGCTCCCGGCGGGCTTCGTCCATCGCCGCCTCCCGGCTGGAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp GGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGGTGGAGGGCGTGGGCATATGGCTGCGGCATTCTaGAAGCTCACTGTCCGGTCC +
Preference number: 4 (lower is better)
Translates to: GGASGQRRAVPAGGGRGHMAAAF*KLTVRS
Trigger: GGACCGGACAGTGAGCTTGCAGAATGCCGCAGCCAT...ATGCCCACGCCCTCCACCTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR GCA 90 bp GGGTGGGTGGAGATGGAAGTGTTAGGGCCGGTGCTCAGTACCCCTGGTCAGACCAGCGAAGGGACCCGATaGAGACCTTCGCGGCCATCA +
Preference number: 4 (lower is better)
Translates to: GWVEMEVLGPVLSTPGQTSEGTR*RPSRPS
Trigger: TGATGGCCGCGAAGGTCTGCATCGGGTCCCTTCGCT...GGTCTGACCAGGGGTACTGAGCACCGGCCCTAACACTTCCATCTCCACCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCAGGTGCATGCCACTCTaGTTCTTCATGGTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSRCMPL*FFMVRP
Trigger: GGGCCTCACCATGAAGAAGCAGAGTGGCATGCACCT...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp CCAGCGAAGGGACCCGATGCAGACCTTCGCGGCCATCAGGGGCACGGTGGGGTCGCAAAGTCAGGTGCATaGCACTCTGCTTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: PAKGPDADLRGHQGHGGVAKSGA*HSASSW
Trigger: CCATGAAGAAGCAGAGTGGCATGCACCTGACTTTGC...GACCCCACCGTGCCCCTGATGGCCGCGAAGGTCTGCATCGGGTCCCTTCGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp CCAGCGAAGGGACCCGATGCAGACCTTCGCGGCCATCAGGGGCACGGTGGGGTCTCAGGCAAAGTCAGGTaGATGCCACTCTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: PAKGPDADLRGHQGHGGVSGKVR*MPLCFF
Trigger: GAAGAAGCAGAGTGGCATGCACCTGACTTTGCCTGA...GACCCCACCGTGCCCCTGATGGCCGCGAAGGTCTGCATCGGGTCCCTTCGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp TGGGTGGAGATGGAAGTGTTAGGGCCGGTGCTCAGTACCCCTGGTCAGACCCCAAGGGCAGTACAGGGCTaGTGGCCTCCAGCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: WVEMEVLGPVLSTPGQTPRAVQG*WPPAQG
Trigger: CCCTTGAGCTGGAGGCCAGCAGCCCTGTACTGCCCT...TGGGGTCTGACCAGGGGTACTGAGCACCGGCCCTAACACTTCCATCTCCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp ATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCAAGGGCAGTACAGGGCTaGTGGCCTCCAGCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: MYFPEAPHLMPLLPHPDPRAVQG*WPPAQG
Trigger: CCCTTGAGCTGGAGGCCAGCAGCCCTGTACTGCCCT...TGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACACCCACGTTCCCTGCTaGCTCTCCCTCTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDTHVPC*LSLWPA
Trigger: GGCTGGCCAGAGGGAGAGGCAGCAGGGAACGTGGGT...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp CATCCAGGGCATGCTGGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGGTCTGACCCACGTTCCCTaGTGCCTCTCCCTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: HPGHAGGASGQRRAVPAGLTHVP*CLSLWP
Trigger: TGGCCAGAGGGAGAGGCAGCAGGGAACGTGGGTCAG...ACCTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCTGGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR GCA 90 bp GGGTGGGTGGAGATGGAAGTGTTAGGGCCGGTGCTCAGTACCCCTGGTCAGACCTGGCCTCCCTCATCCTaGAACAGCCCCTCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GWVEMEVLGPVLSTPGQTWPPSS*NSPSCP
Trigger: TGGACAGGAGGGGCTGTTGCAGGATGAGGGAGGCCA...GGTCTGACCAGGGGTACTGAGCACCGGCCCTAACACTTCCATCTCCACCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp CCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCTGGGGGCTTGTTCTCCATaGACATGTCATCAATCCCGG +
Preference number: 4 (lower is better)
Translates to: PEAPHLMPLLPHPDPRSLGACSP*TCHQSR
Trigger: CCGGGATTGATGACATGTCCATGGAGAACAAGCCCC...CAGGGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp GACCTTCGCGGCCATCAGGGGCACGGTGGGGTCCGAGGGCCGCAACTTCACACACCAGAGTCTGCATCATaGGCATCAGGCAAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: DLRGHQGHGGVRGPQLHTPESAS*ASGKVR
Trigger: CCTGACTTTGCCTGATGCCCATGATGCAGACTCTGG...TGTGTGAAGTTGCGGCCCTCGGACCCCACCGTGCCCCTGATGGCCGCGAAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp ATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCATGGTCCACAGCTGCATaGGGCCCTGCTTCAGGACCG +
Preference number: 4 (lower is better)
Translates to: MYFPEAPHLMPLLPHPDPWSTAA*GPASGP
Trigger: CGGTCCTGAAGCAGGGCCCCATGCAGCTGTGGACCA...TGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp ATGGGGCCCTGCTTCAGGACCGAAGAGGGCATAGTCAGCTCTGACATGGCCTCCAGGCCCGCCGCCTCCTaGATGCAGAAACCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: MGPCFRTEEGIVSSDMASRPAAS*MQKPAS
Trigger: GGAAGCAGGTTTCTGCATCCAGGAGGCGGCGGGCCT...GGAGGCCATGTCAGAGCTGACTATGCCCTCTTCGGTCCTGAAGCAGGGCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTCCAGGAAGGCCCTCTTaGCCCAGCCAAGAGAACGAG +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRPGRPS*PSQENE
Trigger: CTCGTTCTCTTGGCTGGGCCAAGAGGGCCTTCCTGG...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp GAGCAGTGCCAGCAGGTGGAGGGCGTGGGCATCATCCTTGCGTACCTTCAGGGCTGCCTACCTCCATGTTaGTGGCCCTCAAGGGACCTG +
Preference number: 4 (lower is better)
Translates to: EQCQQVEGVGIILAYLQGCLPPC*WPSRDL
Trigger: CAGGTCCCTTGAGGGCCACCAACATGGAGGTAGGCA...GCCCTGAAGGTACGCAAGGATGATGCCCACGCCCTCCACCTGCTGGCACTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR CCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTGGGAGGCGGAGGTGGTaGGAGGATTGCTTGAACCCA +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRGRRRW*EDCLNP
Trigger: TGGGTTCAAGCAATCCTCCCACCACCTCCGCCTCCC...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409245.5
3UTR CAA 72 bp AGGCCCGCCGCCTCCTGGATGCAGAAACCTGCTTCCTaGAGGTGCTGCTGCTCCATGAACAGCTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: RPAASWMQKPAS*RCCCSMNSSAA
Trigger: GGCTGCTGAGCTGTTCATGGAGCAGCAGCACCTCAAGGAAGCAGGTTTCTGCATCCAGGAGGCGGCGGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR TCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTCCCGTGCGTACATGCTaGTGGCATCTCGGTATGAGC +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRPVRTC*WHLGMS
Trigger: GCTCATACCGAGATGCCATCAGCATGTACGCACGGG...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTGACAGCAGCCGCATCTaGTACAGGGGCTTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRDSSRI*YRGLFS
Trigger: GGAGAACAAGCCCCTGTATCAGATGCGGCTGCTGTC...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp CAAAGGCACTTGGTAGCAGGGGGAAAGAGCAAGGTGGGGCCCAGCTGGTCTCAGGGTTTCCGCAGGGCCTaGGTGGCGAAAGAACTCTCC +
Preference number: 4 (lower is better)
Translates to: QRHLVAGGKSKVGPSWSQGFRRA*VAKELS
Trigger: GGAGAGTTCTTTCGCCACTCAGGCCCTGCGGAAACC...CTGAGACCAGCTGGGCCCCACCTTGCTCTTTCCCCCTGCTACCAAGTGCCTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp ATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCAGGCACTCCGAGAGCATaGCGTACTGTCCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: MYFPEAPHLMPLLPHPDPGTPRA*RTVPFC
Trigger: GCAGAAGGGGACAGTACGTCATGCTCTCGGAGTGCC...TGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp GCTCCATGGCACTGGAGATCTGTCGGACGAGGGCCAGCTGCAGCGAGACATAGAGGCACTCCGAGAGCATaGCGTACTGTCCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: APWHWRSVGRGPAAARHRGTPRA*RTVPFC
Trigger: GCAGAAGGGGACAGTACGTCATGCTCTCGGAGTGCC...TCTATGTCTCGCTGCAGCTGGCCCTCGTCCGACAGATCTCCAGTGCCATGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR TCA 90 bp TGGGTGGAGATGGAAGTGTTAGGGCCGGTGCTCAGTACCCCTGGTCAGACCCCACCTGCAGGCTATAGGTaGGACCCAGAGCCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: WVEMEVLGPVLSTPGQTPPAGYR*DPEPGS
Trigger: GCTACCTGGCTCTGGGTCTCACCTATAGCCTGCAGG...TGGGGTCTGACCAGGGGTACTGAGCACCGGCCCTAACACTTCCATCTCCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp TGGGTGGTGAGATGTACTGGGGACAGTCCTAGAAACTGCCTACCTCCATGTTGGCTGGGCGCCAGCTGCTaGGCCCTCTCCAGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: WVVRCTGDSPRNCLPPCWLGASC*ALSSVC
Trigger: GCAGACGCTGGAGAGGGCTCAGCAGCTGGCGCCCAG...CCAACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCTCACCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp CTTCCGGTGCAATTCATCTTGCTTGGACTTCAGGGTGGCGTCGGTGGCCTGCAGGCGAGACATAGAGGATaGCCTGGGGGTCACTGGGCG +
Preference number: 4 (lower is better)
Translates to: LPVQFILLGLQGGVGGLQARHRG*PGGHWA
Trigger: CGCCCAGTGACCCCCAGGTCATCCTCTATGTCTCGC...CTGCAGGCCACCGACGCCACCCTGAAGTCCAAGCAAGATGAATTGCACCGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR TCA 90 bp CTGGGGACAGTCCTAGAAACTGCCTACCTCCATGTTGGTGGCCCTCAAGGGACCGGGCATAGTCAGCTCTaGCATGGCCTCCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: LGTVLETAYLHVGGPQGTGHSQL*HGLLQP
Trigger: CGGCTGGAGGAGGCCATGTCAGAGCTGACTATGCCC...GGTCCCTTGAGGGCCACCAACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp GCTATGCATGATGCGCACGCCATCTGGGTTCACCGTGAGCGCCTCCTTGTACAGGGGCATAGTCAGCTCTaGCATGGCCTCCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: AMHDAHAIWVHRERLLVQGHSQL*HGLLQP
Trigger: CGGCTGGAGGAGGCCATGTCAGAGCTGACTATGCCC...CTGTACAAGGAGGCGCTCACGGTGAACCCAGATGGCGTGCGCATCATGCATAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR TCA 90 bp CGCCAGCTGCTGAGCCCTCTCCAGCGTCTGCAGTGCCTTCCGGTGCAATTCATCGCCCTGGGCAAGACCTaGGAGAGATCCAGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: RQLLSPLQRLQCLPVQFIALGKT*ERSRSL
Trigger: CAGACTTCTGGATCTCTCTCAGGTCTTGCCCAGGGC...GATGAATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGCTCAGCAGCTGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR TCA 90 bp TGGGTGGAGATGGAAGTGTTAGGGCCGGTGCTCAGTACCCCTGGTCAGACCCCACAGAGGTGGCCAATCTaGACAAGGCCCAGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: WVEMEVLGPVLSTPGQTPQRWPI*TRPRSL
Trigger: GAGGGACCTGGGCCTTGTTCAGATTGGCCACCTCTG...TGGGGTCTGACCAGGGGTACTGAGCACCGGCCCTAACACTTCCATCTCCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR GCA 90 bp AAAGAAATCCAGGAAGGCCCTCTTGGCCCAGCCAAGAGAACGAGGGCTGCAGCTCTCAGCGTCTGCAGCTaGCGGACCAGCTCCGGCATG +
Preference number: 4 (lower is better)
Translates to: KEIQEGPLGPAKRTRAAALSVCS*RTSSGM
Trigger: CATGCCGGAGCTGGTCCGGCAGCTGCAGACGCTGAG...AGCTGCAGCCCTCGTTCTCTTGGCTGGGCCAAGAGGGCCTTCCTGGATTTCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000394850.6
CDS-3UTR GCA 90 bp GGGGAAGAGGCCCGCCGCCTCCTGGATGCAGAAACCTGCTTCCTTGAGGTGCTGTTCTCCTTCAAACACTaGTCCAGGAGGGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: GEEARRLLDAETCFLEVLFSFKH*SRRASA
Trigger: GGCTGAGGCCCTCCTGGAGCAGTGTTTGAAGGAGAA...CAGCACCTCAAGGAAGCAGGTTTCTGCATCCAGGAGGCGGCGGGCCTCTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441914.5
CDS-3UTR GCA 90 bp CTGGGGACAGTCCTAGAAACTGCCTACCTCCATGTTGGTGGCCCTCAAGGGACCAGGACCCCCGCCAGGTaGTTGGCCGCCATCACTTTG +
Preference number: 4 (lower is better)
Translates to: LGTVLETAYLHVGGPQGTRTPAR*LAAITL
Trigger: CAAAGTGATGGCGGCCAAGCACCTGGCGGGGGTCCT...GGTCCCTTGAGGGCCACCAACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp ATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCAAGCGAAGGGACCCGATaGAGACCTTCGCGGCCATCA +
Preference number: 4 (lower is better)
Translates to: MYFPEAPHLMPLLPHPDPSEGTR*RPSRPS
Trigger: TGATGGCCGCGAAGGTCTGCATCGGGTCCCTTCGCT...TGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp AAGGCACTTGGTAGCAGGGGGAAAGAGCAAGGTGGGGCCCAGCTGGTCTCAGAGGCCCTCTCCAGCGTCTaGAGTGCCTTCCGGTGCAAT +
Preference number: 4 (lower is better)
Translates to: KALGSRGKEQGGAQLVSEALSSV*SAFRCN
Trigger: ATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGC...CTCTGAGACCAGCTGGGCCCCACCTTGCTCTTTCCCCCTGCTACCAAGTGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTCGTGGGCATCATCCTTaGGTACCTTCAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRRGHHP*VPSGPP
Trigger: AGGAGGCCCTGAAGGTACGCAAGGATGATGCCCACG...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp CGCCAGCTGCTGAGCCCTCTCCAGCGTCTGCAGTGCCTTCCGGTGCAATTCATCCGTGGGCATCATCCTTaGGTACCTTCAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RQLLSPLQRLQCLPVQFIRGHHP*VPSGPP
Trigger: AGGAGGCCCTGAAGGTACGCAAGGATGATGCCCACG...GATGAATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGCTCAGCAGCTGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR GCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTAGGGCATGCTGGTGGTaGTTCTGGGCAGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRRACWW*FWAEKS
Trigger: GCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCT...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp CCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCTGTTGAAGTTCTCAGGGTaGTCGGTGATGGCCATGTTG +
Preference number: 4 (lower is better)
Translates to: PEAPHLMPLLPHPDPRSLLKFSG*SVMAML
Trigger: CAACATGGCCATCACCGAGCACCCTGAGAACTTCAA...CAGGGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTGCCTCAGCACTTGTCTaGAGGTCACGAGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRASALV*RSRGLP
Trigger: AGGAAGCCCTCGTGACCTGCAGACAAGTGCTGAGGC...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp CCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCTGTCAGGCAAAGTCAGGTaGATGCCACTCTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: PEAPHLMPLLPHPDPRSLSGKVR*MPLCFF
Trigger: GAAGAAGCAGAGTGGCATGCACCTGACTTTGCCTGA...CAGGGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp ACCTCTGACCACCGGGACTGTGTTCCCCCAAGAAGCCGGAGGCATGCTTTGATGAGCTGCATGGGGCCCTaGTTCAGGACCGAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: TSDHRDCVPPRSRRHALMSCMGP*FRTEEG
Trigger: GCCCTCTTCGGTCCTGAAGCAGGGCCCCATGCAGCT...CATCAAAGCATGCCTCCGGCTTCTTGGGGGAACACAGTCCCGGTGGTCAGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR GCA 90 bp GGTTGCCCTTCACCTCAGCCAGCCGGCCCCGCATATAGAGTACTGAGTGAGAAGAGCTGCATGGGGCCCTaGTTCAGGACCGAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: GCPSPQPAGPAYRVLSEKSCMGP*FRTEEG
Trigger: GCCCTCTTCGGTCCTGAAGCAGGGCCCCATGCAGCT...CTTCTCACTCAGTACTCTATATGCGGGGCCGGCTGGCTGAGGTGAAGGGCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCTGACCCACGTTCCCTaGTGCCTCTCCCTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDLTHVP*CLSLWP
Trigger: TGGCCAGAGGGAGAGGCAGCAGGGAACGTGGGTCAG...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGGCTGCCGCAGCTTGTaGAGTGGAGCTGGCAGACGC +
Preference number: 4 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPGCRSL*SGAGRR
Trigger: GCGTCTGCCAGCTCCACTGCACAAGCTGCGGCAGCC...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409245.5
CDS-3UTR CCA 90 bp ACTCCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCGGTGCGGCCAAGAAGTaGAGACCCGGCCGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: TPSLRREPRNLIVFPLARGAAKK*RPGRGR
Trigger: CCGCCCCCGGCCGGGTCTCCACTTCTTGGCCGCACC...GCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000394850.6
CDS-3UTR CCA 90 bp GGCCTCCCAGCTGGGAGAAGCTGTACAGGGTCTGCCACAGCCTCAGCACTTGTCGGGAGGCGATGGAGTTaGGTAGGCGTTCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: GLPAGRSCTGSATASALVGRRWS*VGVPER
Trigger: TCTCTCTGGAACGCCTACCCAACTCCATCGCCTCCC...GACAAGTGCTGAGGCTGTGGCAGACCCTGTACAGCTTCTCCCAGCTGGGAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACGAGCCAGGTAGCCCTTaGGGAGGAACTCCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDEPGSP*GGTPRL
Trigger: AAGCCGGGGAGTTCCTCCCCAAGGGCTACCTGGCTC...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp GGTTGCCCTTCACCTCAGCCAGCCGGCCCCGCATATAGAGTACTGAGTGAGAAGGAGCCAGGTAGCCCTTaGGGAGGAACTCCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: GCPSPQPAGPAYRVLSEKEPGSP*GGTPRL
Trigger: AAGCCGGGGAGTTCCTCCCCAAGGGCTACCTGGCTC...CTTCTCACTCAGTACTCTATATGCGGGGCCGGCTGGCTGAGGTGAAGGGCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp CCTCCAGGTTGCCCTTCACCTCAGCCAGCCGGCCCCGCATATAGAGTACTGAGTAGCAGGTGGAGGGCGTaGGCATCATCCTTGCGTACC +
Preference number: 4 (lower is better)
Translates to: PPGCPSPQPAGPAYRVLSSRWRA*ASSLRT
Trigger: GGTACGCAAGGATGATGCCCACGCCCTCCACCTGCT...ACTCAGTACTCTATATGCGGGGCCGGCTGGCTGAGGTGAAGGGCAACCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACAGCAGTGCCAGCAGGTaGAGGGCGTGGGCATCATCC +
Preference number: 4 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDSSASR*RAWASS
Trigger: GGATGATGCCCACGCCCTCCACCTGCTGGCACTGCT...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp ACCTCTGACCACCGGGACTGTGTTCCCCCAAGAAGCCGGAGGCATGCTTTGATGAGCAGTGCCAGCAGGTaGAGGGCGTGGGCATCATCC +
Preference number: 4 (lower is better)
Translates to: TSDHRDCVPPRSRRHALMSSASR*RAWASS
Trigger: GGATGATGCCCACGCCCTCCACCTGCTGGCACTGCT...CATCAAAGCATGCCTCCGGCTTCTTGGGGGAACACAGTCCCGGTGGTCAGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR CCA 90 bp GCCGCAACTTCACACACTCCCGCAGCAGGGACACAGCGTAGGCTGACTTCCCACACATCCAGGGCATGCTaGTGGTGCTTCTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: AATSHTPAAGTQRRLTSHTSRAC*WCFWAE
Trigger: CTCTGCCCAGAAGCACCACCAGCATGCCCTGGATGT...GTGGGAAGTCAGCCTACGCTGTGTCCCTGCTGCGGGAGTGTGTGAAGTTGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp CCTCCAGGTTGCCCTTCACCTCAGCCAGCCGGCCCCGCATATAGAGTACTGAGTCACGAGGGCTTCCTCTaGGCCTTTCAGCACCTGCTC +
Preference number: 4 (lower is better)
Translates to: PPGCPSPQPAGPAYRVLSHEGFL*AFQHLL
Trigger: GAGCAGGTGCTGAAAGGCCCAGAGGAAGCCCTCGTG...ACTCAGTACTCTATATGCGGGGCCGGCTGGCTGAGGTGAAGGGCAACCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCTAGGCCTCCCAGCTaGGAGAAGCTGTACAGGGTC +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRSRPPS*EKLYRV
Trigger: GACCCTGTACAGCTTCTCCCAGCTGGGAGGCCTAGA...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCCAGAGTCTGCATCATaGGCATCAGGCAAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSPESAS*ASGKVR
Trigger: CCTGACTTTGCCTGATGCCCATGATGCAGACTCTGG...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp CAGCATCAGACCCAGGCTATGCATGATGCGCACGCCATCTGGGTTCACCGTGAGTGGTCCACAGCTGCATaGGGCCCTGCTTCAGGACCG +
Preference number: 4 (lower is better)
Translates to: QHQTQAMHDAHAIWVHREWSTAA*GPASGP
Trigger: CGGTCCTGAAGCAGGGCCCCATGCAGCTGTGGACCA...CTCACGGTGAACCCAGATGGCGTGCGCATCATGCATAGCCTGGGTCTGATGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACGATGCGCACGCCATCTaGGTTCACCGTGAGCGCCTC +
Preference number: 4 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDDAHAI*VHRERL
Trigger: GAGGCGCTCACGGTGAACCCAGATGGCGTGCGCATC...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp TGGGTGGAGATGGAAGTGTTAGGGCCGGTGCTCAGTACCCCTGGTCAGACCCCATGGGCCAAGCTCTTGTaGCCCAGCCGACTCAGCATC +
Preference number: 4 (lower is better)
Translates to: WVEMEVLGPVLSTPGQTPWAKLL*PSRLSI
Trigger: GATGCTGAGTCGGCTGGGCCACAAGAGCTTGGCCCA...TGGGGTCTGACCAGGGGTACTGAGCACCGGCCCTAACACTTCCATCTCCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp GGGTGGGTGGAGATGGAAGTGTTAGGGCCGGTGCTCAGTACCCCTGGTCAGACCTCACGAAGCACCTTCTaGGCCAAGCTCTTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: GWVEMEVLGPVLSTPGQTSRSTF*AKLLWP
Trigger: GGGCCACAAGAGCTTGGCCCAGAAGGTGCTTCGTGA...GGTCTGACCAGGGGTACTGAGCACCGGCCCTAACACTTCCATCTCCACCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp CACTTGCCCGCAGTTTCTTCACATTGTGACCGCCCTGGGCAAGACCTGAGAGAGCCCTGCCACGCCTCGTaGCACGTACTCTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: HLPAVSSHCDRPGQDLREPCHAS*HVLCLS
Trigger: GGAGAGGCAGAGTACGTGCCACGAGGCGTGGCAGGG...CTCTCTCAGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACTGCGGGCAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTCCCTGCCACGCCTCGTaGCACGTACTCTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPPCHAS*HVLCLS
Trigger: GGAGAGGCAGAGTACGTGCCACGAGGCGTGGCAGGG...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp GTGCTCGGTGATGGCCATGTTGACAACATCCAGGGCATGCTGGTGGTGCTTCTGCCCTGCCACGCCTCGTaGCACGTACTCTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: VLGDGHVDNIQGMLVVLLPCHAS*HVLCLS
Trigger: GGAGAGGCAGAGTACGTGCCACGAGGCGTGGCAGGG...CAGAAGCACCACCAGCATGCCCTGGATGTTGTCAACATGGCCATCACCGAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp ACCTCTGACCACCGGGACTGTGTTCCCCCAAGAAGCCGGAGGCATGCTTTGATGCCTACGGAGGCTGCTTaGGCTGGAGCACATCGCCAG +
Preference number: 4 (lower is better)
Translates to: TSDHRDCVPPRSRRHALMPTEAA*AGAHRQ
Trigger: CTGGCGATGTGCTCCAGCCCAAGCAGCCTCCGTAGG...CATCAAAGCATGCCTCCGGCTTCTTGGGGGAACACAGTCCCGGTGGTCAGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409825.5
3UTR CAA 72 bp CTAGCAACCACAGGATCTAAAGCCTACGGAGGCTGCTaGGGCTGGAGCACATCGCCAGGGAGATGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LATTGSKAYGGC*GWSTSPGRWGG
Trigger: CCCACCCCATCTCCCTGGCGATGTGCTCCAGCCCAAGCAGCCTCCGTAGGCTTTAGATCCTGTGGTTGCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
3UTR CAA 72 bp TCCACGGCATCACGAAGCACCTTCTGGGCCAAGCTCTaGTGGCCCAGCCGACTCAGCATCAGACCCAGGCTA +
Preference number: 4 (lower is better)
Translates to: STASRSTFWAKL*WPSRLSIRPRL
Trigger: TAGCCTGGGTCTGATGCTGAGTCGGCTGGGCCACAAGAGCTTGGCCCAGAAGGTGCTTCGTGATGCCGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR TCA 90 bp CCAGCTCTTGGGGAGCAAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGCGGTGTCCGGAAAGGTaGACGCTGCGCTCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PALGEQVWSPQNSPKALRRCPER*TLRSGC
Trigger: GCAGCCCGAGCGCAGCGTTCACCTTTCCGGACACCG...CCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTTGCTCCCCAAGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000394850.6
CDS-3UTR TCA 90 bp GGGTGGGTGGAGATGGAAGTGTTAGGGCCGGTGCTCAGTACCCCTGGTCAGACCGATGGCATCTCGGTATaGGCCCTCCACGTAATGCAG +
Preference number: 4 (lower is better)
Translates to: GWVEMEVLGPVLSTPGQTDGISV*ALHVMQ
Trigger: CTGCATTACGTGGAGGGCTCATACCGAGATGCCATC...GGTCTGACCAGGGGTACTGAGCACCGGCCCTAACACTTCCATCTCCACCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp GCCGGCCCCGCATATAGAGTACTGAGTGAGAAGTGGGGAAGAGGCCCGCCGCCTCTTCCAGGAAGTAGGTaGGCTCATAGTCAAGCGGGT +
Preference number: 4 (lower is better)
Translates to: AGPAYRVLSEKWGRGPPPLPGSR*AHSQAG
Trigger: ACCCGCTTGACTATGAGCTCACCTACTTCCTGGAAG...AGGCGGCGGGCCTCTTCCCCACTTCTCACTCAGTACTCTATATGCGGGGCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR TCA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACGGTTTCCGCAGGGCCTaGGTGGCGAAAGAACTCTCC +
Preference number: 4 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDGFRRA*VAKELS
Trigger: GGAGAGTTCTTTCGCCACTCAGGCCCTGCGGAAACC...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp CTGGGGACAGTCCTAGAAACTGCCTACCTCCATGTTGGTGGCCCTCAAGGGACCGGCACTCCGAGAGCATaGCGTACTGTCCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LGTVLETAYLHVGGPQGTGTPRA*RTVPFC
Trigger: GCAGAAGGGGACAGTACGTCATGCTCTCGGAGTGCC...GGTCCCTTGAGGGCCACCAACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp ATCCAGGGCATGCTGGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGGTGGGACACAGCGTAGGCTaGCTTCCCACAAGCCACCAT +
Preference number: 4 (lower is better)
Translates to: IQGMLVVLLGREEQCQQVGHSVG*LPTSHH
Trigger: ATGGTGGCTTGTGGGAAGTCAGCCTACGCTGTGTCC...CACCTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCTGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR TCA 90 bp CACTTGCCCGCAGTTTCTTCACATTGTGACCGCCCTGGGCAAGACCTGAGAGAGGGGCATAGTCAGCTCTaGCATGGCCTCCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: HLPAVSSHCDRPGQDLREGHSQL*HGLLQP
Trigger: CGGCTGGAGGAGGCCATGTCAGAGCTGACTATGCCC...CTCTCTCAGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACTGCGGGCAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp CAAAGGCACTTGGTAGCAGGGGGAAAGAGCAAGGTGGGGCCCAGCTGGTCTCAGCATCTGGGTTCACCGTaGGCGCCTCCTTGTACAGCT +
Preference number: 4 (lower is better)
Translates to: QRHLVAGGKSKVGPSWSQHLGSP*APPCTA
Trigger: AGCTGTACAAGGAGGCGCTCACGGTGAACCCAGATG...CTGAGACCAGCTGGGCCCCACCTTGCTCTTTCCCCCTGCTACCAAGTGCCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp CTGTGGGTGGTGAGATGTACTGGGGACAGTCCTAGAAACTGCCTACCTCCATGTCTGAGGCCCCGCACCTaGTGCCACTGTTGCCCCACC +
Preference number: 4 (lower is better)
Translates to: LWVVRCTGDSPRNCLPPCLRPRT*CHCCPT
Trigger: GGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAG...ACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCTCACCACCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp TCCTCCTGCTCCGGCACCCGGCTCAGCACCACATCTCGAGTTGCCATGGATTCGAAAGATGTATTTCCCTaGGGCCCCGCACCTGATGCC +
Preference number: 4 (lower is better)
Translates to: SSCSGTRLSTTSRVAMDSKDVFP*GPAPDA
Trigger: GGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTT...CGAATCCATGGCAACTCGAGATGTGGTGCTGAGCCGGGTGCCGGAGCAGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR TCA 90 bp GAGCAGTGCCAGCAGGTGGAGGGCGTGGGCATCATCCTTGCGTACCTTCAGGGCAGTTTCTTCACATTGTaGCCGCCCTGGGCAAGACCT +
Preference number: 4 (lower is better)
Translates to: EQCQQVEGVGIILAYLQGSFFTL*PPWARP
Trigger: AGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACT...GCCCTGAAGGTACGCAAGGATGATGCCCACGCCCTCCACCTGCTGGCACTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR TCA 90 bp GAAGGGACCCGATGCAGACCTTCGCGGCCATCAGGGGCACGGTGGGGTCCGAGGGCAGGAGTAATGTGTTaGCTCAGGGTATTAGAAAGG +
Preference number: 4 (lower is better)
Translates to: EGTRCRPSRPSGARWGPRAGVMC*LRVLER
Trigger: CCTTTCTAATACCCTGAGTCAACACATTACTCCTGC...CCTCGGACCCCACCGTGCCCCTGATGGCCGCGAAGGTCTGCATCGGGTCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR TCA 90 bp GCCGCAACTTCACACACTCCCGCAGCAGGGACACAGCGTAGGCTGACTTCCCACATCTCTGTTCAGACGTaGGTCCTGCCTTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: AATSHTPAAGTQRRLTSHISVQT*VLPWPL
Trigger: GAGAGGCCAAGGCAGGACTCACGTCTGAACAGAGAT...GTGGGAAGTCAGCCTACGCTGTGTCCCTGCTGCGGGAGTGTGTGAAGTTGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR GCA 90 bp AGCAGTGCCAGCAGGTGGAGGGCGTGGGCATCATCCTTGCGTACCTTCAGGGCCCCACGTAATGCAGTTTaGCCAGGATCAGCATGGCCT +
Preference number: 4 (lower is better)
Translates to: SSASRWRAWASSLRTFRAPRNAV*PGSAWP
Trigger: AGGCCATGCTGATCCTGGGCAAACTGCATTACGTGG...GGCCCTGAAGGTACGCAAGGATGATGCCCACGCCCTCCACCTGCTGGCACTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp AAGGCACTTGGTAGCAGGGGGAAAGAGCAAGGTGGGGCCCAGCTGGTCTCAGAGATGGCTGCGGCATTCTaGAAGCTCACTGTCCGGTCC +
Preference number: 4 (lower is better)
Translates to: KALGSRGKEQGGAQLVSEMAAAF*KLTVRS
Trigger: GGACCGGACAGTGAGCTTGCAGAATGCCGCAGCCAT...CTCTGAGACCAGCTGGGCCCCACCTTGCTCTTTCCCCCTGCTACCAAGTGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCACCATCATGGCAAAGTaGTCTGCTTCCTCTAGCCAG +
Preference number: 4 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSTIMAK*SASSSQ
Trigger: CTGGCTAGAGGAAGCAGAGCACTTTGCCATGATGGT...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp AGCAGTGCCAGCAGGTGGAGGGCGTGGGCATCATCCTTGCGTACCTTCAGGGCCCGGTGCAATTCATCTTaGTTGGACTTCAGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: SSASRWRAWASSLRTFRARCNSS*LDFRVA
Trigger: CGCCACCCTGAAGTCCAAGCAAGATGAATTGCACCG...GGCCCTGAAGGTACGCAAGGATGATGCCCACGCCCTCCACCTGCTGGCACTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCTGCAGTGCCTTCCGGTaGAATTCATCTTGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSCSAFR*NSSCLD
Trigger: GTCCAAGCAAGATGAATTGCACCGGAAGGCACTGCA...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp CAGCTGCTGAGCCCTCTCCAGCGTCTGCAGTGCCTTCCGGTGCAATTCATCTTGGCCCTCTCCAGCGTCTaGAGTGCCTTCCGGTGCAAT +
Preference number: 4 (lower is better)
Translates to: QLLSPLQRLQCLPVQFILALSSV*SAFRCN
Trigger: ATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGC...CAAGATGAATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGCTCAGCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR GCA 90 bp CAAAGGCACTTGGTAGCAGGGGGAAAGAGCAAGGTGGGGCCCAGCTGGTCTCAGGCCTCAGCACTTGTCTaGAGGTCACGAGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: QRHLVAGGKSKVGPSWSQASALV*RSRGLP
Trigger: AGGAAGCCCTCGTGACCTGCAGACAAGTGCTGAGGC...CTGAGACCAGCTGGGCCCCACCTTGCTCTTTCCCCCTGCTACCAAGTGCCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTAGCTGCATGGGGCCCTaGTTCAGGACCGAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPSCMGP*FRTEEG
Trigger: GCCCTCTTCGGTCCTGAAGCAGGGCCCCATGCAGCT...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTAACAGCTCAGCAGCCTaGAGCCAGATCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRNSSAA*SQICSS
Trigger: GCTGGAACAGATCTGGCTGCAGGCTGCTGAGCTGTT...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTCCTGCTTCCTTGAGGTaGTGCTGCTCCATGAACAGC +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRPASLR*CCSMNS
Trigger: GCTGTTCATGGAGCAGCAGCACCTCAAGGAAGCAGG...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp GGGGAAGAGGCCCGCCGCCTCCTGGATGCAGAAACCTGCTTCCTTGAGGTGCTGATCAGACCCAGGCTATaGATGATGCGCACGCCATCT +
Preference number: 4 (lower is better)
Translates to: GEEARRLLDAETCFLEVLIRPRL*MMRTPS
Trigger: AGATGGCGTGCGCATCATGCATAGCCTGGGTCTGAT...CAGCACCTCAAGGAAGCAGGTTTCTGCATCCAGGAGGCGGCGGGCCTCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp ATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCATCGTGGCACGTACTCTaGCTCTCCACGGCATCACGA +
Preference number: 4 (lower is better)
Translates to: MYFPEAPHLMPLLPHPDPSWHVL*LSTASR
Trigger: TCGTGATGCCGTGGAGAGGCAGAGTACGTGCCACGA...TGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp AGAAATCCAGGAAGGCCCTCTTGGCCCAGCCAAGAGAACGAGGGCTGCAGCTGCGTGGCCCATCAGCAATaGCCGAGGGGATCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: RNPGRPSWPSQENEGCSCVAHQQ*PRGSLF
Trigger: GAACAGAGATCCCCTCGGGCATTGCTGATGGGCCAC...GCAGCTGCAGCCCTCGTTCTCTTGGCTGGGCCAAGAGGGCCTTCCTGGATTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR GCA 90 bp AGCCCTCTCCAGCGTCTGCAGTGCCTTCCGGTGCAATTCATCTTGCTTGGACTTGAGAGAGGCCTCCCCTaGAGGACCTCTGACCACCGG +
Preference number: 4 (lower is better)
Translates to: SPLQRLQCLPVQFILLGLERGLP*RTSDHR
Trigger: CCGGTGGTCAGAGGTCCTGCAGGGGAGGCCTCTCTC...AAGTCCAAGCAAGATGAATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR GCA 90 bp CCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCTGTCTTTCTTCCCAACTTaGAGCAGGACGAACCAAGAG +
Preference number: 4 (lower is better)
Translates to: PEAPHLMPLLPHPDPRSLSFFPT*SRTNQE
Trigger: CTCTTGGTTCGTCCTGCTGCAAGTTGGGAAGAAAGA...CAGGGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409245.5
CDS-3UTR GCA 90 bp AGCAGTGCCAGCAGGTGGAGGGCGTGGGCATCATCCTTGCGTACCTTCAGGGCCCGGTGCAATTCATCTTaGTTGGACTTCAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SSASRWRAWASSLRTFRARCNSS*LDFRVA
Trigger: GGCCACCCTGAAGTCCAAGCAAGATGAATTGCACCG...GGCCCTGAAGGTACGCAAGGATGATGCCCACGCCCTCCACCTGCTGGCACTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440051.1
CDS-3UTR CCA 90 bp CAAAGGCACTTGGTAGCAGGGGGAAAGAGCAAGGTGGGGCCCAGCTGGTCTCAGGGGAGGCGATGGAGTTaGGTAGGCGTTCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: QRHLVAGGKSKVGPSWSQGRRWS*VGVPER
Trigger: TCTCTCTGGAACGCCTACCCAACTCCATCGCCTCCC...CTGAGACCAGCTGGGCCCCACCTTGCTCTTTCCCCCTGCTACCAAGTGCCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp ACCCGATGCAGACCTTCGCGGCCATCAGGGGCACGGTGGGGTCCGAGGGCCGCAACGTGCTGTTATTTGTaGTCTTCTCCAATTCCTGCA +
Preference number: 4 (lower is better)
Translates to: TRCRPSRPSGARWGPRAATCCYL*SSPIPA
Trigger: TGCAGGAATTGGAGAAGACCACAAATAACAGCACGT...TGCGGCCCTCGGACCCCACCGTGCCCCTGATGGCCGCGAAGGTCTGCATCGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCAGTTCTGAGTTGCTTTaGTCTCCACAGTCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSSSELL*SPQSAA
Trigger: TGCTGCGGACTGTGGAGACCAAAGCAACTCAGAACT...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp ATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCATCCGCAGGGCCTGAGTaGCGAAAGAACTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: MYFPEAPHLMPLLPHPDPSAGPE*RKNSPP
Trigger: AGGAGGAGAGTTCTTTCGCCACTCAGGCCCTGCGGA...TGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp AAGGTGGCCCATCAGCAATGCCCGAGGGGATCTCTGTTCAGACGTGAGTCCTGCAGCAGGTGGAGGGCGTaGGCATCATCCTTGCGTACC +
Preference number: 4 (lower is better)
Translates to: KVAHQQCPRGSLFRRESCSRWRA*ASSLRT
Trigger: GGTACGCAAGGATGATGCCCACGCCCTCCACCTGCT...GCAGGACTCACGTCTGAACAGAGATCCCCTCGGGCATTGCTGATGGGCCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACAGCAGGTGGAGGGCGTaGGCATCATCCTTGCGTACC +
Preference number: 4 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDSRWRA*ASSLRT
Trigger: GGTACGCAAGGATGATGCCCACGCCCTCCACCTGCT...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp AACATCCAGGGCATGCTGGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGAGCAGGTGGAGGGCGTaGGCATCATCCTTGCGTACC +
Preference number: 4 (lower is better)
Translates to: NIQGMLVVLLGREEQCQQSRWRA*ASSLRT
Trigger: GGTACGCAAGGATGATGCCCACGCCCTCCACCTGCT...CTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCTGGATGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR CCA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCACGAGGGCTTCCTCTaGGCCTTTCAGCACCTGCTC +
Preference number: 4 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDHEGFL*AFQHLL
Trigger: GAGCAGGTGCTGAAAGGCCCAGAGGAAGCCCTCGTG...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp ACATCCAGGGCATGCTGGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGGTCTAGGCCTCCCAGCTaGGAGAAGCTGTACAGGGTC +
Preference number: 4 (lower is better)
Translates to: TSRACWWCFWAEKSSASRSRPPS*EKLYRV
Trigger: GACCCTGTACAGCTTCTCCCAGCTGGGAGGCCTAGA...CCTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCTGGATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp AGGAACTCCCCGGCTTCCTCTCCGAGGCTGATCACCATCATGGCAAAGTGCTCTTGGTCCACAGCTGCATaGGGCCCTGCTTCAGGACCG +
Preference number: 4 (lower is better)
Translates to: RNSPASSPRLITIMAKCSWSTAA*GPASGP
Trigger: CGGTCCTGAAGCAGGGCCCCATGCAGCTGTGGACCA...AGAGCACTTTGCCATGATGGTGATCAGCCTCGGAGAGGAAGCCGGGGAGTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp CACTTGCCCGCAGTTTCTTCACATTGTGACCGCCCTGGGCAAGACCTGAGAGAGAGGCCCGCCGCCTCCTaGATGCAGAAACCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: HLPAVSSHCDRPGQDLRERPAAS*MQKPAS
Trigger: GGAAGCAGGTTTCTGCATCCAGGAGGCGGCGGGCCT...CTCTCTCAGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACTGCGGGCAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp CAGCTGCTGAGCCCTCTCCAGCGTCTGCAGTGCCTTCCGGTGCAATTCATCTTGGTACTGAGTGAGAAGTaGGGAAGAGGCCCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: QLLSPLQRLQCLPVQFILVLSEK*GRGPPP
Trigger: AGGCGGCGGGCCTCTTCCCCACTTCTCACTCAGTAC...CAAGATGAATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGCTCAGCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGATGCGCACGCCATCTaGGTTCACCGTGAGCGCCTC +
Preference number: 4 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPDAHAI*VHRERL
Trigger: GAGGCGCTCACGGTGAACCCAGATGGCGTGCGCATC...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp GCTATGCATGATGCGCACGCCATCTGGGTTCACCGTGAGCGCCTCCTTGTACAGTGGGCCAAGCTCTTGTaGCCCAGCCGACTCAGCATC +
Preference number: 4 (lower is better)
Translates to: AMHDAHAIWVHRERLLVQWAKLL*PSRLSI
Trigger: GATGCTGAGTCGGCTGGGCCACAAGAGCTTGGCCCA...CTGTACAAGGAGGCGCTCACGGTGAACCCAGATGGCGTGCGCATCATGCATAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp TGGGTGGAGATGGAAGTGTTAGGGCCGGTGCTCAGTACCCCTGGTCAGACCCCATCACGAAGCACCTTCTaGGCCAAGCTCTTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: WVEMEVLGPVLSTPGQTPSRSTF*AKLLWP
Trigger: GGGCCACAAGAGCTTGGCCCAGAAGGTGCTTCGTGA...TGGGGTCTGACCAGGGGTACTGAGCACCGGCCCTAACACTTCCATCTCCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp AAGGCACTTGGTAGCAGGGGGAAAGAGCAAGGTGGGGCCCAGCTGGTCTCAGAGTCACGAAGCACCTTCTaGGCCAAGCTCTTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: KALGSRGKEQGGAQLVSESRSTF*AKLLWP
Trigger: GGGCCACAAGAGCTTGGCCCAGAAGGTGCTTCGTGA...CTCTGAGACCAGCTGGGCCCCACCTTGCTCTTTCCCCCTGCTACCAAGTGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp CTGCTCCAGCTTCACCTTGGTGAACATCAGGTTGAAGTTCTCAGGGTGCTCGGTACGGCAGCCTCGTTCTaGCCCTGGGCCTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: LLQLHLGEHQVEVLRVLGTAASF*PWACST
Trigger: GGTGCTGCAGGCCCAGGGCCAGAACGAGGCTGCCGT...ACCGAGCACCCTGAGAACTTCAACCTGATGTTCACCAAGGTGAAGCTGGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp TGGATGCAGAAACCTGCTTCCTTGAGGTGCTGCTGCTCCATGAACAGCTCAGCAACGGCAGCCTCGTTCTaGCCCTGGGCCTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: WMQKPASLRCCCSMNSSATAASF*PWACST
Trigger: GGTGCTGCAGGCCCAGGGCCAGAACGAGGCTGCCGT...TGCTGAGCTGTTCATGGAGCAGCAGCACCTCAAGGAAGCAGGTTTCTGCATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp CTGGGGACAGTCCTAGAAACTGCCTACCTCCATGTTGGTGGCCCTCAAGGGACCCCAGGAAGGCCCTCTTaGCCCAGCCAAGAGAACGAG +
Preference number: 4 (lower is better)
Translates to: LGTVLETAYLHVGGPQGTPGRPS*PSQENE
Trigger: CTCGTTCTCTTGGCTGGGCCAAGAGGGCCTTCCTGG...GGTCCCTTGAGGGCCACCAACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp GGGCTGTGGGTGGTGAGATGTACTGGGGACAGTCCTAGAAACTGCCTACCTCCACCGCTGCCCAGCTCTTaGGGAGCAAGTCTGGTCACC +
Preference number: 4 (lower is better)
Translates to: GLWVVRCTGDSPRNCLPPPLPSS*GASLVT
Trigger: GGTGACCAGACTTGCTCCCCAAGAGCTGGGCAGCGG...TGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCTCACCACCCACAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTCCGCTGCCCAGCTCTTaGGGAGCAAGTCTGGTCACC +
Preference number: 4 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPPLPSS*GASLVT
Trigger: GGTGACCAGACTTGCTCCCCAAGAGCTGGGCAGCGG...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp AAAGAAATCCAGGAAGGCCCTCTTGGCCCAGCCAAGAGAACGAGGGCTGCAGCTCCTACGGAGGCTGCTTaGGCTGGAGCACATCGCCAG +
Preference number: 4 (lower is better)
Translates to: KEIQEGPLGPAKRTRAAAPTEAA*AGAHRQ
Trigger: CTGGCGATGTGCTCCAGCCCAAGCAGCCTCCGTAGG...AGCTGCAGCCCTCGTTCTCTTGGCTGGGCCAAGAGGGCCTTCCTGGATTTCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp AAAGAAATCCAGGAAGGCCCTCTTGGCCCAGCCAAGAGAACGAGGGCTGCAGCTGGCCTGGCTCAAGGCTaGTGTGGGAGCTACATGCCC +
Preference number: 4 (lower is better)
Translates to: KEIQEGPLGPAKRTRAAAGLAQG*CGSYMP
Trigger: GGGCATGTAGCTCCCACACCAGCCTTGAGCCAGGCC...AGCTGCAGCCCTCGTTCTCTTGGCTGGGCCAAGAGGGCCTTCCTGGATTTCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCGGCTCCAGCGTGTTGTaGTCGTTTCATCAAGAAGGA +
Preference number: 4 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSGSSVL*SFHQEG
Trigger: TCCTTCTTGATGAAACGACCACAACACGCTGGAGCC...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409245.5
CDS-3UTR CCA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCTTGTGCAGTGGAGCTaGCAGACGCTGGAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDLVQWS*QTLEAG
Trigger: GCCTGCTTCCAGCGTCTGCCAGCTCCACTGCACAAG...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409245.5
CDS-3UTR CCA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTTTGCTGGGACTCCCGTaGAAGCGAACGGGGACAGCG +
Preference number: 4 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPLLGLP*KRTGTA
Trigger: CGCTGTCCCCGTTCGCTTCCACGGGAGTCCCAGCAA...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409245.5
3UTR CAA 72 bp AGCGTCTGCAGTGCCTTCCGGTGCAATTCATCTTGCTaGGACTTCAGGGTGGCGTCGGTGGCCTGCAGGCTA +
Preference number: 4 (lower is better)
Translates to: SVCSAFRCNSSC*DFRVASVACRL
Trigger: TAGCCTGCAGGCCACCGACGCCACCCTGAAGTCCAAGCAAGATGAATTGCACCGGAAGGCACTGCAGACGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR TCA 90 bp TGCATCATGGGCATCAGGCAAAGTCAGGTGCATGCCACTCTGCTTCTTCATGGTCGGTGTCCGGAAAGGTaGACGCTGCGCTCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: CIMGIRQSQVHATLLLHGRCPER*TLRSGC
Trigger: GCAGCCCGAGCGCAGCGTTCACCTTTCCGGACACCG...ACCATGAAGAAGCAGAGTGGCATGCACCTGACTTTGCCTGATGCCCATGATGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441914.5
CDS-3UTR TCA 90 bp ATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCAGATGGCATCTCGGTATaGGCCCTCCACGTAATGCAG +
Preference number: 4 (lower is better)
Translates to: MYFPEAPHLMPLLPHPDPDGISV*ALHVMQ
Trigger: CTGCATTACGTGGAGGGCTCATACCGAGATGCCATC...TGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp GGGCTGCAGCTGCAGAGGCGTTCACTAAAGATGTATTTCCCTGAGGCCCCGCACCCCGTGCGTACATGCTaGTGGCATCTCGGTATGAGC +
Preference number: 4 (lower is better)
Translates to: GLQLQRRSLKMYFPEAPHPVRTC*WHLGMS
Trigger: GCTCATACCGAGATGCCATCAGCATGTACGCACGGG...GTGCGGGGCCTCAGGGAAATACATCTTTAGTGAACGCCTCTGCAGCTGCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp GCTATGCATGATGCGCACGCCATCTGGGTTCACCGTGAGCGCCTCCTTGTACAGGACAGCAGCCGCATCTaGTACAGGGGCTTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: AMHDAHAIWVHRERLLVQDSSRI*YRGLFS
Trigger: GGAGAACAAGCCCCTGTATCAGATGCGGCTGCTGTC...CTGTACAAGGAGGCGCTCACGGTGAACCCAGATGGCGTGCGCATCATGCATAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR TCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTCCCTCTCAAAACAGGTaGTCACTTCCTCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRPSQNR*SLPPPS
Trigger: AGAGGGAGGAGGAAGTGATCACCTGTTTTGAGAGGG...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTCTTCCAGGAAGTAGGTaGGCTCATAGTCAAGCGGGT +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRLPGSR*AHSQAG
Trigger: ACCCGCTTGACTATGAGCTCACCTACTTCCTGGAAG...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp CGCCAGCTGCTGAGCCCTCTCCAGCGTCTGCAGTGCCTTCCGGTGCAATTCATCCTTCCAGGAAGTAGGTaGGCTCATAGTCAAGCGGGT +
Preference number: 4 (lower is better)
Translates to: RQLLSPLQRLQCLPVQFILPGSR*AHSQAG
Trigger: ACCCGCTTGACTATGAGCTCACCTACTTCCTGGAAG...GATGAATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGCTCAGCAGCTGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR TCA 90 bp CCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCTGACCTGGTACCAAAGGTaGAATTCTCCAAACGCAAAC +
Preference number: 4 (lower is better)
Translates to: PEAPHLMPLLPHPDPRSLTWYQR*NSPNAN
Trigger: GTTTGCGTTTGGAGAATTTCACCTTTGGTACCAGGT...CAGGGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTCCTGCAGGCTATAGGTaGGACCCAGAGCCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPPAGYR*DPEPGS
Trigger: GCTACCTGGCTCTGGGTCTCACCTATAGCCTGCAGG...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp TCTCATAGTCTTCCCACTTGCCCGCAGTTTCTTCACATTGTGACCGCCCTGGGCGCGAGACATAGAGGATaGCCTGGGGGTCACTGGGCG +
Preference number: 4 (lower is better)
Translates to: SHSLPTCPQFLHIVTALGARHRG*PGGHWA
Trigger: CGCCCAGTGACCCCCAGGTCATCCTCTATGTCTCGC...GCCCAGGGCGGTCACAATGTGAAGAAACTGCGGGCAAGTGGGAAGACTATGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp AAGGTGGCCCATCAGCAATGCCCGAGGGGATCTCTGTTCAGACGTGAGTCCTGCCATCTGGGTTCACCGTaGGCGCCTCCTTGTACAGCT +
Preference number: 4 (lower is better)
Translates to: KVAHQQCPRGSLFRRESCHLGSP*APPCTA
Trigger: AGCTGTACAAGGAGGCGCTCACGGTGAACCCAGATG...GCAGGACTCACGTCTGAACAGAGATCCCCTCGGGCATTGCTGATGGGCCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR TCA 90 bp GGGCTGTGGGTGGTGAGATGTACTGGGGACAGTCCTAGAAACTGCCTACCTCCAGACCCAGGCTATGCATaGTGCGCACGCCATCTGGGT +
Preference number: 4 (lower is better)
Translates to: GLWVVRCTGDSPRNCLPPDPGYA*CARHLG
Trigger: ACCCAGATGGCGTGCGCATCATGCATAGCCTGGGTC...TGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCTCACCACCCACAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCAGGCTATGCATaGTGCGCACGCCATCTGGGT +
Preference number: 4 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPDPGYA*CARHLG
Trigger: ACCCAGATGGCGTGCGCATCATGCATAGCCTGGGTC...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp CAAAGGCACTTGGTAGCAGGGGGAAAGAGCAAGGTGGGGCCCAGCTGGTCTCAGAGAGCTCTCTGGGGATaGTGGAGAAGGGCAGTACAG +
Preference number: 4 (lower is better)
Translates to: QRHLVAGGKSKVGPSWSQRALWG*WRRAVQ
Trigger: CTGTACTGCCCTTCTCCATCATCCCCAGAGAGCTCT...CTGAGACCAGCTGGGCCCCACCTTGCTCTTTCCCCCTGCTACCAAGTGCCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp AACACTCTCACCAGCTCAAATCCACATTTTCCCAGAGGGTCCTCCCTCCCATCCACTGTTGCCCCACCCTaGCCCACGTTCCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: NTLTSSNPHFPRGSSLPSTVAPP*PTFPAA
Trigger: GGCAGCAGGGAACGTGGGTCAGGGTGGGGCAACAGT...GGATGGGAGGGAGGACCCTCTGGGAAAATGTGGATTTGAGCTGGTGAGAGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR TCA 90 bp AGACCTGAGAGAGATCCAGAAGTCTGTACTGTGCTGAGAGTGGGGAGTGAGAACCTGAGGCCCCGCACCTaGTGCCACTGTTGCCCCACC +
Preference number: 4 (lower is better)
Translates to: RPERDPEVCTVLRVGSENLRPRT*CHCCPT
Trigger: GGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAG...GTTCTCACTCCCCACTCTCAGCACAGTACAGACTTCTGGATCTCTCTCAGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp ATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCAAAAGATGTATTTCCCTaGGGCCCCGCACCTGATGCC +
Preference number: 4 (lower is better)
Translates to: MYFPEAPHLMPLLPHPDPKDVFP*GPAPDA
Trigger: GGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTT...TGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp AAGGCACTTGGTAGCAGGGGGAAAGAGCAAGGTGGGGCCCAGCTGGTCTCAGAGATAGGCCTGGGGGACTaGCTCCTTGGAGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: KALGSRGKEQGGAQLVSEIGLGD*LLGEEF
Trigger: GAACTCTTCTCCAAGGAGTCAGTCCCCCAGGCCTAT...CTCTGAGACCAGCTGGGCCCCACCTTGCTCTTTCCCCCTGCTACCAAGTGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp TTAGCAACACTCTCACCAGCTCAAATCCACATTTTCCCAGAGGGTCCTCCCTCCACGCTGCGCTCGGGCTaGCTCGCCTGTTACCTCCGC +
Preference number: 4 (lower is better)
Translates to: LATLSPAQIHIFPEGPPSTLRSG*LACYLR
Trigger: GCGGAGGTAACAGGCGAGGCAGCCCGAGCGCAGCGT...GGAGGGAGGACCCTCTGGGAAAATGTGGATTTGAGCTGGTGAGAGTGTTGCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319190.11
CDS-3UTR GCA 90 bp ATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCAATCAATCCCGGCCCGTaGGTACATGCTGATGGCATC +
Preference number: 4 (lower is better)
Translates to: MYFPEAPHLMPLLPHPDPINPGP*VHADGI
Trigger: GATGCCATCAGCATGTACGCACGGGCCGGGATTGAT...TGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp GGGCTGCAGCTGCAGAGGCGTTCACTAAAGATGTATTTCCCTGAGGCCCCGCACATGGCTGCGGCATTCTaGAAGCTCACTGTCCGGTCC +
Preference number: 4 (lower is better)
Translates to: GLQLQRRSLKMYFPEAPHMAAAF*KLTVRS
Trigger: GGACCGGACAGTGAGCTTGCAGAATGCCGCAGCCAT...GTGCGGGGCCTCAGGGAAATACATCTTTAGTGAACGCCTCTGCAGCTGCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACATGGCTGCGGCATTCTaGAAGCTCACTGTCCGGTCC +
Preference number: 4 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDMAAAF*KLTVRS
Trigger: GGACCGGACAGTGAGCTTGCAGAATGCCGCAGCCAT...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp GTGCTCGGTGATGGCCATGTTGACAACATCCAGGGCATGCTGGTGGTGCTTCTGAGCGAAGGGACCCGATaGAGACCTTCGCGGCCATCA +
Preference number: 4 (lower is better)
Translates to: VLGDGHVDNIQGMLVVLLSEGTR*RPSRPS
Trigger: TGATGGCCGCGAAGGTCTGCATCGGGTCCCTTCGCT...CAGAAGCACCACCAGCATGCCCTGGATGTTGTCAACATGGCCATCACCGAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR GCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTCGGTGCAATTCATCTTaGTTGGACTTCAGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRRCNSS*LDFRVA
Trigger: CGCCACCCTGAAGTCCAAGCAAGATGAATTGCACCG...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp GGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGGTGGAGGGCGTGGGCATTGCAGTGCCTTCCGGTaGAATTCATCTTGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: GGASGQRRAVPAGGGRGHCSAFR*NSSCLD
Trigger: GTCCAAGCAAGATGAATTGCACCGGAAGGCACTGCA...ATGCCCACGCCCTCCACCTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR GCA 90 bp ATCCAGGGCATGCTGGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGGTGCTCCAGCGTCTGCAGTaGCTTCCGGTGCAATTCATC +
Preference number: 4 (lower is better)
Translates to: IQGMLVVLLGREEQCQQVLQRLQ*LPVQFI
Trigger: GATGAATTGCACCGGAAGGCACTGCAGACGCTGGAG...CACCTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR GCA 90 bp AAAGAAATCCAGGAAGGCCCTCTTGGCCCAGCCAAGAGAACGAGGGCTGCAGCTGCCCTCTCCAGCGTCTaGAGTGCCTTCCGGTGCAAT +
Preference number: 4 (lower is better)
Translates to: KEIQEGPLGPAKRTRAAAALSSV*SAFRCN
Trigger: ATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGC...AGCTGCAGCCCTCGTTCTCTTGGCTGGGCCAAGAGGGCCTTCCTGGATTTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp GGTTGCCCTTCACCTCAGCCAGCCGGCCCCGCATATAGAGTACTGAGTGAGAAGAGGGCATGCTGGTGGTaGTTCTGGGCAGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GCPSPQPAGPAYRVLSEKRACWW*FWAEKS
Trigger: GCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCT...CTTCTCACTCAGTACTCTATATGCGGGGCCGGCTGGCTGAGGTGAAGGGCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp GGTTGCCCTTCACCTCAGCCAGCCGGCCCCGCATATAGAGTACTGAGTGAGAAGGCCTCAGCACTTGTCTaGAGGTCACGAGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: GCPSPQPAGPAYRVLSEKASALV*RSRGLP
Trigger: AGGAAGCCCTCGTGACCTGCAGACAAGTGCTGAGGC...CTTCTCACTCAGTACTCTATATGCGGGGCCGGCTGGCTGAGGTGAAGGGCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTAAGCTGTACAGGGTCTaGCACAGCCTCAGCACTTGT +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRKLYRV*HSLSTC
Trigger: ACAAGTGCTGAGGCTGTGGCAGACCCTGTACAGCTT...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACGGCCCTCACCGAAGCTaGCATCCTTTTCTAGGCCTC +
Preference number: 4 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDGPHRS*HPFLGL
Trigger: GAGGCCTAGAAAAGGATGGCAGCTTCGGTGAGGGCC...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp TCCTTTTCTAGGCCTCCCAGCTGGGAGAAGCTGTACAGGGTCTGCCACAGCCTCGGCCCTCACCGAAGCTaGCATCCTTTTCTAGGCCTC +
Preference number: 4 (lower is better)
Translates to: SFSRPPSWEKLYRVCHSLGPHRS*HPFLGL
Trigger: GAGGCCTAGAAAAGGATGGCAGCTTCGGTGAGGGCC...GAGGCTGTGGCAGACCCTGTACAGCTTCTCCCAGCTGGGAGGCCTAGAAAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp CTTCCGGTGCAATTCATCTTGCTTGGACTTCAGGGTGGCGTCGGTGGCCTGCAGCCGGGAGCCAGAGTCTaGATCATGGGCATCAGGCAA +
Preference number: 4 (lower is better)
Translates to: LPVQFILLGLQGGVGGLQPGARV*IMGIRQ
Trigger: TTGCCTGATGCCCATGATGCAGACTCTGGCTCCCGG...CTGCAGGCCACCGACGCCACCCTGAAGTCCAAGCAAGATGAATTGCACCGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp ACATCCAGGGCATGCTGGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGGAACAGCTCAGCAGCCTaGAGCCAGATCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: TSRACWWCFWAEKSSASRNSSAA*SQICSS
Trigger: GCTGGAACAGATCTGGCTGCAGGCTGCTGAGCTGTT...CCTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCTGGATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCTTGAGGTGCTGCTaGTCCATGAACAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRSLRCC*SMNSSA
Trigger: TGCTGAGCTGTTCATGGAGCAGCAGCACCTCAAGGA...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp GGCTCGCTCCAGGCACTCCGAGAGCATGACGTACTGTCCCCTTCTGCCCAACGTTCCTTGAGGTGCTGCTaGTCCATGAACAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GSLQALREHDVLSPSAQRSLRCC*SMNSSA
Trigger: TGCTGAGCTGTTCATGGAGCAGCAGCACCTCAAGGA...ACGTTGGGCAGAAGGGGACAGTACGTCATGCTCTCGGAGTGCCTGGAGCGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp AGAAATCCAGGAAGGCCCTCTTGGCCCAGCCAAGAGAACGAGGGCTGCAGCTGCCCTGCTTCCTTGAGGTaGTGCTGCTCCATGAACAGC +
Preference number: 4 (lower is better)
Translates to: RNPGRPSWPSQENEGCSCPASLR*CCSMNS
Trigger: GCTGTTCATGGAGCAGCAGCACCTCAAGGAAGCAGG...GCAGCTGCAGCCCTCGTTCTCTTGGCTGGGCCAAGAGGGCCTTCCTGGATTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp CCTCCAGGTTGCCCTTCACCTCAGCCAGCCGGCCCCGCATATAGAGTACTGAGTCCTGCTTCCTTGAGGTaGTGCTGCTCCATGAACAGC +
Preference number: 4 (lower is better)
Translates to: PPGCPSPQPAGPAYRVLSPASLR*CCSMNS
Trigger: GCTGTTCATGGAGCAGCAGCACCTCAAGGAAGCAGG...ACTCAGTACTCTATATGCGGGGCCGGCTGGCTGAGGTGAAGGGCAACCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACTCGTGGCACGTACTCTaGCTCTCCACGGCATCACGA +
Preference number: 4 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDSWHVL*LSTASR
Trigger: TCGTGATGCCGTGGAGAGGCAGAGTACGTGCCACGA...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp GGGCAAGCAGGGGCAATGCAGGAATCATCTACTAACTCCAAGTCTGAGAAGGGAACCTCGCCCAGGCCCTaGCACGCCTCGTGGCACGTA +
Preference number: 4 (lower is better)
Translates to: GQAGAMQESSTNSKSEKGTSPRP*HASWHV
Trigger: TACGTGCCACGAGGCGTGGCAGGGCCTGGGCGAGGT...TCCCTTCTCAGACTTGGAGTTAGTAGATGATTCCTGCATTGCCCCTGCTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp GCAGTTTCTTCACATTGTGACCGCCCTGGGCAAGACCTGAGAGAGATCCAGAAGACCCACGTTCCCTGCTaGCTCTCCCTCTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: AVSSHCDRPGQDLREIQKTHVPC*LSLWPA
Trigger: GGCTGGCCAGAGGGAGAGGCAGCAGGGAACGTGGGT...CTTCTGGATCTCTCTCAGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp TGGATGCAGAAACCTGCTTCCTTGAGGTGCTGCTGCTCCATGAACAGCTCAGCAACCCACGTTCCCTGCTaGCTCTCCCTCTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: WMQKPASLRCCCSMNSSATHVPC*LSLWPA
Trigger: GGCTGGCCAGAGGGAGAGGCAGCAGGGAACGTGGGT...TGCTGAGCTGTTCATGGAGCAGCAGCACCTCAAGGAAGCAGGTTTCTGCATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR GCA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCCCAGTGAATATACATaGTGCTTCAGACAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSPSEYT*CFRQAC
Trigger: GCAGGCTTGTCTGAAGCAGCATGTATATTCACTGGG...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR GCA 90 bp GGTTGCCCTTCACCTCAGCCAGCCGGCCCCGCATATAGAGTACTGAGTGAGAAGGTGGCCCATCAGCAATaGCCGAGGGGATCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: GCPSPQPAGPAYRVLSEKVAHQQ*PRGSLF
Trigger: GAACAGAGATCCCCTCGGGCATTGCTGATGGGCCAC...CTTCTCACTCAGTACTCTATATGCGGGGCCGGCTGGCTGAGGTGAAGGGCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR GCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTAGGTGGTGGGAGGATTaGTTGAACCCAGGAGTTCGA +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRRWWED*LNPGVR
Trigger: TCGAACTCCTGGGTTCAAGCAATCCTCCCACCACCT...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409245.5
CDS-3UTR CCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTGGGGCTTGTTCTCCATaGACATGTCATCAATCCCGG +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRGACSP*TCHQSR
Trigger: CCGGGATTGATGACATGTCCATGGAGAACAAGCCCC...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACGGGAGGCGATGGAGTTaGGTAGGCGTTCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDGRRWS*VGVPER
Trigger: TCTCTCTGGAACGCCTACCCAACTCCATCGCCTCCC...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp GGTTGCCCTTCACCTCAGCCAGCCGGCCCCGCATATAGAGTACTGAGTGAGAAGTCCGCAGGGCCTGAGTaGCGAAAGAACTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GCPSPQPAGPAYRVLSEKSAGPE*RKNSPP
Trigger: AGGAGGAGAGTTCTTTCGCCACTCAGGCCCTGCGGA...CTTCTCACTCAGTACTCTATATGCGGGGCCGGCTGGCTGAGGTGAAGGGCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR CCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTCCTCGATGTTGTCCTTaGGGCAGTAGAGGTTGTCTC +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRPRCCP*GSRGCL
Trigger: GAGACAACCTCTACTGCCCCAAGGACAACATCGAGG...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp AGACCTGAGAGAGATCCAGAAGTCTGTACTGTGCTGAGAGTGGGGAGTGAGAACCCATCAGGGGCACGGTaGGGTCCGAGGGCCGCAACT +
Preference number: 4 (lower is better)
Translates to: RPERDPEVCTVLRVGSENPSGAR*GPRAAT
Trigger: AGTTGCGGCCCTCGGACCCCACCGTGCCCCTGATGG...GTTCTCACTCCCCACTCTCAGCACAGTACAGACTTCTGGATCTCTCTCAGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp TCCAGGGCATGCTGGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGGTGGGCAATTCATCTTGCTTaGACTTCAGGGTGGCGTCGG +
Preference number: 4 (lower is better)
Translates to: SRACWWCFWAEKSSASRWAIHLA*TSGWRR
Trigger: CCGACGCCACCCTGAAGTCCAAGCAAGATGAATTGC...CCACCTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp CGCCAGCTGCTGAGCCCTCTCCAGCGTCTGCAGTGCCTTCCGGTGCAATTCATCGCAATTCATCTTGCTTaGACTTCAGGGTGGCGTCGG +
Preference number: 4 (lower is better)
Translates to: RQLLSPLQRLQCLPVQFIAIHLA*TSGWRR
Trigger: CCGACGCCACCCTGAAGTCCAAGCAAGATGAATTGC...GATGAATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGCTCAGCAGCTGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp CAGCTGCTGAGCCCTCTCCAGCGTCTGCAGTGCCTTCCGGTGCAATTCATCTTGTGCTGGTGGTGCTTCTaGGCAGAGAAGAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: QLLSPLQRLQCLPVQFILCWWCF*AEKSSA
Trigger: GGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCA...CAAGATGAATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGCTCAGCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR CCA 90 bp CTGGGGACAGTCCTAGAAACTGCCTACCTCCATGTTGGTGGCCCTCAAGGGACCACATCCAGGGCATGCTaGTGGTGCTTCTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LGTVLETAYLHVGGPQGTTSRAC*WCFWAE
Trigger: CTCTGCCCAGAAGCACCACCAGCATGCCCTGGATGT...GGTCCCTTGAGGGCCACCAACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTCCAGAGTCTGCATCATaGGCATCAGGCAAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRPESAS*ASGKVR
Trigger: CCTGACTTTGCCTGATGCCCATGATGCAGACTCTGG...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp ATCAGCAATGCCCGAGGGGATCTCTGTTCAGACGTGAGTCCTGCCTTGGCCTCTGTACTGAGTGAGAAGTaGGGAAGAGGCCCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: ISNARGDLCSDVSPALASVLSEK*GRGPPP
Trigger: AGGCGGCGGGCCTCTTCCCCACTTCTCACTCAGTAC...AGAGGCCAAGGCAGGACTCACGTCTGAACAGAGATCCCCTCGGGCATTGCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp TCTCATAGTCTTCCCACTTGCCCGCAGTTTCTTCACATTGTGACCGCCCTGGGCGATGCGCACGCCATCTaGGTTCACCGTGAGCGCCTC +
Preference number: 4 (lower is better)
Translates to: SHSLPTCPQFLHIVTALGDAHAI*VHRERL
Trigger: GAGGCGCTCACGGTGAACCCAGATGGCGTGCGCATC...GCCCAGGGCGGTCACAATGTGAAGAAACTGCGGGCAAGTGGGAAGACTATGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTTGGGCCAAGCTCTTGTaGCCCAGCCGACTCAGCATC +
Preference number: 4 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPWAKLL*PSRLSI
Trigger: GATGCTGAGTCGGCTGGGCCACAAGAGCTTGGCCCA...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp GGGCTGTGGGTGGTGAGATGTACTGGGGACAGTCCTAGAAACTGCCTACCTCCAGGTGGGCCCAGGTCTTaGCTTCGATGCCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GLWVVRCTGDSPRNCLPPGGPRS*LRCLLW
Trigger: CCAGAGAAGGCATCGAAGCCAAGACCTGGGCCCACC...TGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCTCACCACCCACAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp AGCCAGCGAAGGGACCCGATGCAGACCTTCGCGGCCATCAGGGGCACGGTGGGGCAGTACGTTGGTATGTaGCATAACTTATTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: SQRRDPMQTFAAIRGTVGQYVGM*HNLLGV
Trigger: CACCCCTAATAAGTTATGCCACATACCAACGTACTG...CCCCACCGTGCCCCTGATGGCCGCGAAGGTCTGCATCGGGTCCCTTCGCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR CCA 90 bp TCCACGGCATCACGAAGCACCTTCTGGGCCAAGCTCTTGTGGCCCAGCCGACTCCCTCGATGTTGTCCTTaGGGCAGTAGAGGCACTTTG +
Preference number: 4 (lower is better)
Translates to: STASRSTFWAKLLWPSRLPRCCP*GSRGTL
Trigger: CAAAGTGCCTCTACTGCCCCAAGGACAACATCGAGG...GAGTCGGCTGGGCCACAAGAGCTTGGCCCAGAAGGTGCTTCGTGATGCCGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441914.5
CDS-3UTR TCA 90 bp GGGCTGTGGGTGGTGAGATGTACTGGGGACAGTCCTAGAAACTGCCTACCTCCAGACAGCAGCCGCATCTaGTACAGGGGCTTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: GLWVVRCTGDSPRNCLPPDSSRI*YRGLFS
Trigger: GGAGAACAAGCCCCTGTATCAGATGCGGCTGCTGTC...TGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCTCACCACCCACAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp TGCTCGGTGATGGCCATGTTGACAACATCCAGGGCATGCTGGTGGTGCTTCTGGGACAGCAGCCGCATCTaGTACAGGGGCTTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: CSVMAMLTTSRACWWCFWDSSRI*YRGLFS
Trigger: GGAGAACAAGCCCCTGTATCAGATGCGGCTGCTGTC...CCAGAAGCACCACCAGCATGCCCTGGATGTTGTCAACATGGCCATCACCGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR TCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTGGCCGCCATCACTTTaGAGTTCTGAGTTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRWPPSL*SSELLW
Trigger: CCAAAGCAACTCAGAACTTCAAAGTGATGGCGGCCA...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp AGCCAGAGTCTGCATCATGGGCATCAGGCAAAGTCAGGTGCATGCCACTCTGCTGGCACTCCGAGAGCATaGCGTACTGTCCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SQSLHHGHQAKSGACHSAGTPRA*RTVPFC
Trigger: GCAGAAGGGGACAGTACGTCATGCTCTCGGAGTGCC...AGCAGAGTGGCATGCACCTGACTTTGCCTGATGCCCATGATGCAGACTCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR TCA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCACCTGGTACCAAAGGTaGAATTCTCCAAACGCAAAC +
Preference number: 4 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSTWYQR*NSPNAN
Trigger: GTTTGCGTTTGGAGAATTTCACCTTTGGTACCAGGT...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp AGGAACTCCCCGGCTTCCTCTCCGAGGCTGATCACCATCATGGCAAAGTGCTCTCATCTGGGTTCACCGTaGGCGCCTCCTTGTACAGCT +
Preference number: 4 (lower is better)
Translates to: RNSPASSPRLITIMAKCSHLGSP*APPCTA
Trigger: AGCTGTACAAGGAGGCGCTCACGGTGAACCCAGATG...AGAGCACTTTGCCATGATGGTGATCAGCCTCGGAGAGGAAGCCGGGGAGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR TCA 90 bp GGTTGCCCTTCACCTCAGCCAGCCGGCCCCGCATATAGAGTACTGAGTGAGAAGAGAGCTCTCTGGGGATaGTGGAGAAGGGCAGTACAG +
Preference number: 4 (lower is better)
Translates to: GCPSPQPAGPAYRVLSEKRALWG*WRRAVQ
Trigger: CTGTACTGCCCTTCTCCATCATCCCCAGAGAGCTCT...CTTCTCACTCAGTACTCTATATGCGGGGCCGGCTGGCTGAGGTGAAGGGCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR TCA 90 bp GGGCTGCAGCTGCAGAGGCGTTCACTAAAGATGTATTTCCCTGAGGCCCCGCACGCCAAAAGGCCAGGGTaGGGCTCGAATCAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: GLQLQRRSLKMYFPEAPHAKRPG*GSNQGK
Trigger: TTTGCCTTGATTCGAGCCTCACCCTGGCCTTTTGGC...GTGCGGGGCCTCAGGGAAATACATCTTTAGTGAACGCCTCTGCAGCTGCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACGAAGCAGGCCAATCTTaGAACGTAGGGTCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDEAGQS*NVGSKA
Trigger: GGCCTTGGACCCTACGTTTCAAGATTGGCCTGCTTC...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409245.5
CDS-3UTR TCA 90 bp CCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCTGAATGTCAAAAGCTGCTaGTTTCACGAACGGTACATG +
Preference number: 4 (lower is better)
Translates to: PEAPHLMPLLPHPDPRSLNVKSC*FHERYM
Trigger: CATGTACCGTTCGTGAAATCAGCAGCTTTTGACATT...CAGGGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409245.5
CDS-3UTR GCA 90 bp GGTTGCCCTTCACCTCAGCCAGCCGGCCCCGCATATAGAGTACTGAGTGAGAAGATCAATCCCGGCCCGTaGGTACATGCTGATGGCATC +
Preference number: 4 (lower is better)
Translates to: GCPSPQPAGPAYRVLSEKINPGP*VHADGI
Trigger: GATGCCATCAGCATGTACGCACGGGCCGGGATTGAT...CTTCTCACTCAGTACTCTATATGCGGGGCCGGCTGGCTGAGGTGAAGGGCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp ACTCCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCTCCTCACTCAGGGAGTaGAGCAGGACCCCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: TPSLRREPRNLIVFPLARSSLRE*SRTPAR
Trigger: CCTGGCGGGGGTCCTGCTGCACTCCCTGAGTGAGGA...GCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp GTGCTCGGTGATGGCCATGTTGACAACATCCAGGGCATGCTGGTGGTGCTTCTGATGGCTGCGGCATTCTaGAAGCTCACTGTCCGGTCC +
Preference number: 4 (lower is better)
Translates to: VLGDGHVDNIQGMLVVLLMAAAF*KLTVRS
Trigger: GGACCGGACAGTGAGCTTGCAGAATGCCGCAGCCAT...CAGAAGCACCACCAGCATGCCCTGGATGTTGTCAACATGGCCATCACCGAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR GCA 90 bp GCTCCATGGCACTGGAGATCTGTCGGACGAGGGCCAGCTGCAGCGAGACATAGAGAGGTCATAGATGGCTaGGGCATTCTGCAAGCTCAC +
Preference number: 4 (lower is better)
Translates to: APWHWRSVGRGPAAARHREVIDG*GILQAH
Trigger: GTGAGCTTGCAGAATGCCGCAGCCATCTATGACCTC...TCTATGTCTCGCTGCAGCTGGCCCTCGTCCGACAGATCTCCAGTGCCATGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR GCA 90 bp CGCCAGCTGCTGAGCCCTCTCCAGCGTCTGCAGTGCCTTCCGGTGCAATTCATCACCATCATGGCAAAGTaGTCTGCTTCCTCTAGCCAG +
Preference number: 4 (lower is better)
Translates to: RQLLSPLQRLQCLPVQFITIMAK*SASSSQ
Trigger: CTGGCTAGAGGAAGCAGAGCACTTTGCCATGATGGT...GATGAATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGCTCAGCAGCTGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp ATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGGTGCAATTCATCTTaGTTGGACTTCAGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: MYFPEAPHLMPLLPHPDPRCNSS*LDFRVA
Trigger: CGCCACCCTGAAGTCCAAGCAAGATGAATTGCACCG...TGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp GGCCTCCCAGCTGGGAGAAGCTGTACAGGGTCTGCCACAGCCTCAGCACTTGTCTGCAGTGCCTTCCGGTaGAATTCATCTTGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: GLPAGRSCTGSATASALVCSAFR*NSSCLD
Trigger: GTCCAAGCAAGATGAATTGCACCGGAAGGCACTGCA...GACAAGTGCTGAGGCTGTGGCAGACCCTGTACAGCTTCTCCCAGCTGGGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCTCCAGCGTCTGCAGTaGCTTCCGGTGCAATTCATC +
Preference number: 4 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDLQRLQ*LPVQFI
Trigger: GATGAATTGCACCGGAAGGCACTGCAGACGCTGGAG...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp CTTCCGGTGCAATTCATCTTGCTTGGACTTCAGGGTGGCGTCGGTGGCCTGCAGCTCCAGCGTCTGCAGTaGCTTCCGGTGCAATTCATC +
Preference number: 4 (lower is better)
Translates to: LPVQFILLGLQGGVGGLQLQRLQ*LPVQFI
Trigger: GATGAATTGCACCGGAAGGCACTGCAGACGCTGGAG...CTGCAGGCCACCGACGCCACCCTGAAGTCCAAGCAAGATGAATTGCACCGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp ATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCAAAGCTGTACAGGGTCTaGCACAGCCTCAGCACTTGT +
Preference number: 4 (lower is better)
Translates to: MYFPEAPHLMPLLPHPDPKLYRV*HSLSTC
Trigger: ACAAGTGCTGAGGCTGTGGCAGACCCTGTACAGCTT...TGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp AAGGTGGCCCATCAGCAATGCCCGAGGGGATCTCTGTTCAGACGTGAGTCCTGCAGGTGCATGCCACTCTaGTTCTTCATGGTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: KVAHQQCPRGSLFRRESCRCMPL*FFMVRP
Trigger: GGGCCTCACCATGAAGAAGCAGAGTGGCATGCACCT...GCAGGACTCACGTCTGAACAGAGATCCCCTCGGGCATTGCTGATGGGCCACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR GCA 90 bp CATGATGCGCACGCCATCTGGGTTCACCGTGAGCGCCTCCTTGTACAGCTGCTTAGGTGCATGCCACTCTaGTTCTTCATGGTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: HDAHAIWVHRERLLVQLLRCMPL*FFMVRP
Trigger: GGGCCTCACCATGAAGAAGCAGAGTGGCATGCACCT...AAGCAGCTGTACAAGGAGGCGCTCACGGTGAACCCAGATGGCGTGCGCATCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTGCAAAGTCAGGTGCATaGCACTCTGCTTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRAKSGA*HSASSW
Trigger: CCATGAAGAAGCAGAGTGGCATGCACCTGACTTTGC...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp ATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCATCCTTGAGGTGCTGCTaGTCCATGAACAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: MYFPEAPHLMPLLPHPDPSLRCC*SMNSSA
Trigger: TGCTGAGCTGTTCATGGAGCAGCAGCACCTCAAGGA...TGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp CAAAGGCACTTGGTAGCAGGGGGAAAGAGCAAGGTGGGGCCCAGCTGGTCTCAGGCTTCCTTGAGGTGCTaGTGCTCCATGAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: QRHLVAGGKSKVGPSWSQASLRC*CSMNSS
Trigger: TGAGCTGTTCATGGAGCAGCAGCACCTCAAGGAAGC...CTGAGACCAGCTGGGCCCCACCTTGCTCTTTCCCCCTGCTACCAAGTGCCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp ATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCAGCTTCCTTGAGGTGCTaGTGCTCCATGAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: MYFPEAPHLMPLLPHPDPASLRC*CSMNSS
Trigger: TGAGCTGTTCATGGAGCAGCAGCACCTCAAGGAAGC...TGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp CTGCTCCAGCTTCACCTTGGTGAACATCAGGTTGAAGTTCTCAGGGTGCTCGGTAGGGCAGTACAGGGCTaGTGGCCTCCAGCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: LLQLHLGEHQVEVLRVLGRAVQG*WPPAQG
Trigger: CCCTTGAGCTGGAGGCCAGCAGCCCTGTACTGCCCT...ACCGAGCACCCTGAGAACTTCAACCTGATGTTCACCAAGGTGAAGCTGGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp AGACCTGAGAGAGATCCAGAAGTCTGTACTGTGCTGAGAGTGGGGAGTGAGAACCTCCCTCCCTGCGGCTaGAGCGTCGTCAGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: RPERDPEVCTVLRVGSENLPPCG*SVVRAL
Trigger: GAGAGCTCTGACGACGCTGCAGCCGCAGGGAGGGAG...GTTCTCACTCCCCACTCTCAGCACAGTACAGACTTCTGGATCTCTCTCAGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp TGGGTGGTGAGATGTACTGGGGACAGTCCTAGAAACTGCCTACCTCCATGTTGGCTGACCCACGTTCCCTaGTGCCTCTCCCTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: WVVRCTGDSPRNCLPPCWLTHVP*CLSLWP
Trigger: TGGCCAGAGGGAGAGGCAGCAGGGAACGTGGGTCAG...CCAACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCTCACCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp CCAGCTCTTGGGGAGCAAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGCTGACCCACGTTCCCTaGTGCCTCTCCCTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PALGEQVWSPQNSPKALRLTHVP*CLSLWP
Trigger: TGGCCAGAGGGAGAGGCAGCAGGGAACGTGGGTCAG...CCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTTGCTCCCCAAGAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp CACTTGCCCGCAGTTTCTTCACATTGTGACCGCCCTGGGCAAGACCTGAGAGAGCAAGAGAACGAGGGCTaGAGCTGCAGAGGCGTTCAC +
Preference number: 4 (lower is better)
Translates to: HLPAVSSHCDRPGQDLREQENEG*SCRGVH
Trigger: GTGAACGCCTCTGCAGCTGCAGCCCTCGTTCTCTTG...CTCTCTCAGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACTGCGGGCAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp AAAGAAATCCAGGAAGGCCCTCTTGGCCCAGCCAAGAGAACGAGGGCTGCAGCTAAAGCCTACGGAGGCTaGTTGGGCTGGAGCACATCG +
Preference number: 4 (lower is better)
Translates to: KEIQEGPLGPAKRTRAAAKAYGG*LGWSTS
Trigger: CGATGTGCTCCAGCCCAAGCAGCCTCCGTAGGCTTT...AGCTGCAGCCCTCGTTCTCTTGGCTGGGCCAAGAGGGCCTTCCTGGATTTCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp GCTCAAGGCTGGTGTGGGAGCTACATGCCCAGTGAATATACATGCTGCTTCAGAGGCCAGGATCAGCCCTaGCTGGACCCCTCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: AQGWCGSYMPSEYTCCFRGQDQP*LDPSCL
Trigger: GAGGCAAGAGGGGTCCAGGCAGGGCTGATCCTGGCC...TCTGAAGCAGCATGTATATTCACTGGGCATGTAGCTCCCACACCAGCCTTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp ACATCCAGGGCATGCTGGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGGTGCCCAGGATCAGCATaGCCTCACACATGTACTGTG +
Preference number: 4 (lower is better)
Translates to: TSRACWWCFWAEKSSASRCPGSA*PHTCTV
Trigger: CACAGTACATGTGTGAGGCCATGCTGATCCTGGGCA...CCTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCTGGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp CCTCAGCCAGCCGGCCCCGCATATAGAGTACTGAGTGAGAAGTGGGGAAGAGGCGGGGCTTGTTCTCCATaGACATGTCATCAATCCCGG +
Preference number: 4 (lower is better)
Translates to: PQPAGPAYRVLSEKWGRGGACSP*TCHQSR
Trigger: CCGGGATTGATGACATGTCCATGGAGAACAAGCCCC...GCCTCTTCCCCACTTCTCACTCAGTACTCTATATGCGGGGCCGGCTGGCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGGGAGGCGATGGAGTTaGGTAGGCGTTCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPGRRWS*VGVPER
Trigger: TCTCTCTGGAACGCCTACCCAACTCCATCGCCTCCC...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp CCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCTGACGTGCTGTTATTTGTaGTCTTCTCCAATTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PEAPHLMPLLPHPDPRSLTCCYL*SSPIPA
Trigger: TGCAGGAATTGGAGAAGACCACAAATAACAGCACGT...CAGGGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp GGCTCGCTCCAGGCACTCCGAGAGCATGACGTACTGTCCCCTTCTGCCCAACGTAGTTCTGAGTTGCTTTaGTCTCCACAGTCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: GSLQALREHDVLSPSAQRSSELL*SPQSAA
Trigger: TGCTGCGGACTGTGGAGACCAAAGCAACTCAGAACT...ACGTTGGGCAGAAGGGGACAGTACGTCATGCTCTCGGAGTGCCTGGAGCGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp ACATCCAGGGCATGCTGGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGGCCTCGATGTTGTCCTTaGGGCAGTAGAGGTTGTCTC +
Preference number: 4 (lower is better)
Translates to: TSRACWWCFWAEKSSASRPRCCP*GSRGCL
Trigger: GAGACAACCTCTACTGCCCCAAGGACAACATCGAGG...CCTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCTGGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR CCA 90 bp GCTCCATGGCACTGGAGATCTGTCGGACGAGGGCCAGCTGCAGCGAGACATAGATCAGGAGGTCATAGATaGCTGCGGCATTCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: APWHWRSVGRGPAAARHRSGGHR*LRHSAS
Trigger: GCTTGCAGAATGCCGCAGCCATCTATGACCTCCTGA...TCTATGTCTCGCTGCAGCTGGCCCTCGTCCGACAGATCTCCAGTGCCATGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR CCA 90 bp CTGTGGGTGGTGAGATGTACTGGGGACAGTCCTAGAAACTGCCTACCTCCATGTGAGCCAGGTAGCCCTTaGGGAGGAACTCCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: LWVVRCTGDSPRNCLPPCEPGSP*GGTPRL
Trigger: AAGCCGGGGAGTTCCTCCCCAAGGGCTACCTGGCTC...ACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCTCACCACCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp TGGGTGGTGAGATGTACTGGGGACAGTCCTAGAAACTGCCTACCTCCATGTTGGGAGCCAGGTAGCCCTTaGGGAGGAACTCCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: WVVRCTGDSPRNCLPPCWEPGSP*GGTPRL
Trigger: AAGCCGGGGAGTTCCTCCCCAAGGGCTACCTGGCTC...CCAACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCTCACCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp TGGGTGGAGATGGAAGTGTTAGGGCCGGTGCTCAGTACCCCTGGTCAGACCCCAGCAATTCATCTTGCTTaGACTTCAGGGTGGCGTCGG +
Preference number: 4 (lower is better)
Translates to: WVEMEVLGPVLSTPGQTPAIHLA*TSGWRR
Trigger: CCGACGCCACCCTGAAGTCCAAGCAAGATGAATTGC...TGGGGTCTGACCAGGGGTACTGAGCACCGGCCCTAACACTTCCATCTCCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp AAAGAAATCCAGGAAGGCCCTCTTGGCCCAGCCAAGAGAACGAGGGCTGCAGCTTGCTGGTGGTGCTTCTaGGCAGAGAAGAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: KEIQEGPLGPAKRTRAAACWWCF*AEKSSA
Trigger: GGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCA...AGCTGCAGCCCTCGTTCTCTTGGCTGGGCCAAGAGGGCCTTCCTGGATTTCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp GGGCTGTGGGTGGTGAGATGTACTGGGGACAGTCCTAGAAACTGCCTACCTCCATGCTGGTGGTGCTTCTaGGCAGAGAAGAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: GLWVVRCTGDSPRNCLPPCWWCF*AEKSSA
Trigger: GGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCA...TGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCTCACCACCCACAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTACATCCAGGGCATGCTaGTGGTGCTTCTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPTSRAC*WCFWAE
Trigger: CTCTGCCCAGAAGCACCACCAGCATGCCCTGGATGT...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp AACACTCTCACCAGCTCAAATCCACATTTTCCCAGAGGGTCCTCCCTCCCATCCAGGCCCGCCGCCTCCTaGATGCAGAAACCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: NTLTSSNPHFPRGSSLPSRPAAS*MQKPAS
Trigger: GGAAGCAGGTTTCTGCATCCAGGAGGCGGCGGGCCT...GGATGGGAGGGAGGACCCTCTGGGAAAATGTGGATTTGAGCTGGTGAGAGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp CTGTGGGTGGTGAGATGTACTGGGGACAGTCCTAGAAACTGCCTACCTCCATGTAGGCCCGCCGCCTCCTaGATGCAGAAACCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LWVVRCTGDSPRNCLPPCRPAAS*MQKPAS
Trigger: GGAAGCAGGTTTCTGCATCCAGGAGGCGGCGGGCCT...ACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCTCACCACCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp TACATGCCCAGTGAATATACATGCTGCTTCAGACAAGCCTGCTTCCCCTCCAAGACGGCAGCCTCGTTCTaGCCCTGGGCCTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: YMPSEYTCCFRQACFPSKTAASF*PWACST
Trigger: GGTGCTGCAGGCCCAGGGCCAGAACGAGGCTGCCGT...CTTGGAGGGGAAGCAGGCTTGTCTGAAGCAGCATGTATATTCACTGGGCATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTTGCCTACCTCCATGTTaGTGGCCCTCAAGGGACCTG +
Preference number: 4 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPCLPPC*WPSRDL
Trigger: CAGGTCCCTTGAGGGCCACCAACATGGAGGTAGGCA...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp GGGCTGTGGGTGGTGAGATGTACTGGGGACAGTCCTAGAAACTGCCTACCTCCACTAGTGTGCCATGGATaGGGGGTCTCCAACAGCCCA +
Preference number: 4 (lower is better)
Translates to: GLWVVRCTGDSPRNCLPPLVCHG*GVSNSP
Trigger: TGGGCTGTTGGAGACCCCCCATCCATGGCACACTAG...TGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCTCACCACCCACAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACGGAGCTGGCAGACGCTaGAAGCAGGCCAATCTTGAA +
Preference number: 4 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDGAGRR*KQANLE
Trigger: TTCAAGATTGGCCTGCTTCCAGCGTCTGCCAGCTCC...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409245.5
CDS-3UTR TCA 90 bp GGGCGCCAGCTGCTGAGCCCTCTCCAGCGTCTGCAGTGCCTTCCGGTGCAATTCATCACTTTGAAGTTCTaGGTTGCTTTGGTCTCCACA +
Preference number: 4 (lower is better)
Translates to: GRQLLSPLQRLQCLPVQFITLKF*VALVST
Trigger: TGTGGAGACCAAAGCAACTCAGAACTTCAAAGTGAT...GAATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGCTCAGCAGCTGGCGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR TCA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTCCCTTCTGCCCAACGTaGTGCTCAGGAGGTCATAGA +
Preference number: 4 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPPFCPT*CSGGHR
Trigger: TCTATGACCTCCTGAGCATCACGTTGGGCAGAAGGG...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp TGCTCGGTGATGGCCATGTTGACAACATCCAGGGCATGCTGGTGGTGCTTCTGGCCCTTCTGCCCAACGTaGTGCTCAGGAGGTCATAGA +
Preference number: 4 (lower is better)
Translates to: CSVMAMLTTSRACWWCFWPFCPT*CSGGHR
Trigger: TCTATGACCTCCTGAGCATCACGTTGGGCAGAAGGG...CCAGAAGCACCACCAGCATGCCCTGGATGTTGTCAACATGGCCATCACCGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR TCA 90 bp CAGCTGCAGCGAGACATAGAGGATGACCTGGGGGTCACTGGGCGCCAGCTGCTGACCTGGTACCAAAGGTaGAATTCTCCAAACGCAAAC +
Preference number: 4 (lower is better)
Translates to: QLQRDIEDDLGVTGRQLLTWYQR*NSPNAN
Trigger: GTTTGCGTTTGGAGAATTTCACCTTTGGTACCAGGT...CAGCAGCTGGCGCCCAGTGACCCCCAGGTCATCCTCTATGTCTCGCTGCAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR TCA 90 bp AAGGTGGCCCATCAGCAATGCCCGAGGGGATCTCTGTTCAGACGTGAGTCCTGCCTTCCTCTCCGAGGCTaGTCACCATCATGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: KVAHQQCPRGSLFRRESCLPLRG*SPSWQS
Trigger: ACTTTGCCATGATGGTGATCAGCCTCGGAGAGGAAG...GCAGGACTCACGTCTGAACAGAGATCCCCTCGGGCATTGCTGATGGGCCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR TCA 90 bp GCAGTTTCTTCACATTGTGACCGCCCTGGGCAAGACCTGAGAGAGATCCAGAAGCCTGCAGGCTATAGGTaGGACCCAGAGCCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: AVSSHCDRPGQDLREIQKPAGYR*DPEPGS
Trigger: GCTACCTGGCTCTGGGTCTCACCTATAGCCTGCAGG...CTTCTGGATCTCTCTCAGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp TCTCATAGTCTTCCCACTTGCCCGCAGTTTCTTCACATTGTGACCGCCCTGGGCTCTGCTTCTTCATGGTaGGGCCCTCACCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: SHSLPTCPQFLHIVTALGSASSW*GPHRSC
Trigger: GCAGCTTCGGTGAGGGCCTCACCATGAAGAAGCAGA...GCCCAGGGCGGTCACAATGTGAAGAAACTGCGGGCAAGTGGGAAGACTATGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp TGGGTGGAGATGGAAGTGTTAGGGCCGGTGCTCAGTACCCCTGGTCAGACCCCACCGCATATAGAGTACTaGGTGAGAAGTGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: WVEMEVLGPVLSTPGQTPPHIEY*VRSGEE
Trigger: CTCTTCCCCACTTCTCACTCAGTACTCTATATGCGG...TGGGGTCTGACCAGGGGTACTGAGCACCGGCCCTAACACTTCCATCTCCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTAGAGCTCTCTGGGGATaGTGGAGAAGGGCAGTACAG +
Preference number: 4 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPRALWG*WRRAVQ
Trigger: CTGTACTGCCCTTCTCCATCATCCCCAGAGAGCTCT...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp AAAGAAATCCAGGAAGGCCCTCTTGGCCCAGCCAAGAGAACGAGGGCTGCAGCTAAAGATGTATTTCCCTaGGGCCCCGCACCTGATGCC +
Preference number: 4 (lower is better)
Translates to: KEIQEGPLGPAKRTRAAAKDVFP*GPAPDA
Trigger: GGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTT...AGCTGCAGCCCTCGTTCTCTTGGCTGGGCCAAGAGGGCCTTCCTGGATTTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp CCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGACTGTTTCCCAAGGCAGGTGAAGGACAGCTGTaGGGCTCCCCGCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PQNSPKALRVQVRLFPKAGEGQL*GSPLPS
Trigger: GCTGGGCAGCGGGGAGCCTCACAGCTGTCCTTCACC...TGCCTTGGGAAACAGTCTGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp AAAGAAATCCAGGAAGGCCCTCTTGGCCCAGCCAAGAGAACGAGGGCTGCAGCTGCCAAAAGGCCAGGGTaGGGCTCGAATCAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: KEIQEGPLGPAKRTRAAAAKRPG*GSNQGK
Trigger: TTTGCCTTGATTCGAGCCTCACCCTGGCCTTTTGGC...AGCTGCAGCCCTCGTTCTCTTGGCTGGGCCAAGAGGGCCTTCCTGGATTTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp GGGCTGTGGGTGGTGAGATGTACTGGGGACAGTCCTAGAAACTGCCTACCTCCACGGGAAATGCAGTGCTaGGCTAGTGTGCCATGGATG +
Preference number: 4 (lower is better)
Translates to: GLWVVRCTGDSPRNCLPPREMQC*ASVPWM
Trigger: CATCCATGGCACACTAGCTCAGCACTGCATTTCCCG...TGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCTCACCACCCACAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp ACTCCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCAGCAACCTCCGCCTCTaGTGTAGCAGCTCCTGGCGC +
Preference number: 4 (lower is better)
Translates to: TPSLRREPRNLIVFPLARSNLRL*CSSSWR
Trigger: GCGCCAGGAGCTGCTACAGCAGAGGCGGAGGTTGCT...GCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319190.11
CDS-3UTR GCA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTTTCTCCTTCAAACACTaGTCCAGGAGGGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPFSFKH*SRRASA
Trigger: GGCTGAGGCCCTCCTGGAGCAGTGTTTGAAGGAGAA...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
CDS-3UTR GCA 90 bp CTTCCGGTGCAATTCATCTTGCTTGGACTTCAGGGTGGCGTCGGTGGCCTGCAGCCACGTAATGCAGTTTaGCCAGGATCAGCATGGCCT +
Preference number: 4 (lower is better)
Translates to: LPVQFILLGLQGGVGGLQPRNAV*PGSAWP
Trigger: AGGCCATGCTGATCCTGGGCAAACTGCATTACGTGG...CTGCAGGCCACCGACGCCACCCTGAAGTCCAAGCAAGATGAATTGCACCGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp CCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCAGTAGGACCCCCGCCAGGTaGTTGGCCGCCATCACTTTG +
Preference number: 4 (lower is better)
Translates to: PSLRREPRNLIVFPLARSRTPAR*LAAITL
Trigger: CAAAGTGATGGCGGCCAAGCACCTGGCGGGGGTCCT...ACTGCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp GCTCCATGGCACTGGAGATCTGTCGGACGAGGGCCAGCTGCAGCGAGACATAGACACCACATCTCGAGTTaGCATGGATTCGCTGATGAG +
Preference number: 4 (lower is better)
Translates to: APWHWRSVGRGPAAARHRHHISS*HGFADE
Trigger: CTCATCAGCGAATCCATGGCAACTCGAGATGTGGTG...TCTATGTCTCGCTGCAGCTGGCCCTCGTCCGACAGATCTCCAGTGCCATGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp AACATCCAGGGCATGCTGGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGGAGGTCATAGATGGCTaGGGCATTCTGCAAGCTCAC +
Preference number: 4 (lower is better)
Translates to: NIQGMLVVLLGREEQCQQEVIDG*GILQAH
Trigger: GTGAGCTTGCAGAATGCCGCAGCCATCTATGACCTC...CTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCTGGATGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR GCA 90 bp CTGTGGGTGGTGAGATGTACTGGGGACAGTCCTAGAAACTGCCTACCTCCATGTAGCGAAGGGACCCGATaGAGACCTTCGCGGCCATCA +
Preference number: 4 (lower is better)
Translates to: LWVVRCTGDSPRNCLPPCSEGTR*RPSRPS
Trigger: TGATGGCCGCGAAGGTCTGCATCGGGTCCCTTCGCT...ACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCTCACCACCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp AGGCCTTTGAAGTTCTCAGGGTGCTCGGTGATGGCCATGTTGACAACATCCAGGAGCGAAGGGACCCGATaGAGACCTTCGCGGCCATCA +
Preference number: 4 (lower is better)
Translates to: RPLKFSGCSVMAMLTTSRSEGTR*RPSRPS
Trigger: TGATGGCCGCGAAGGTCTGCATCGGGTCCCTTCGCT...CCTGGATGTTGTCAACATGGCCATCACCGAGCACCCTGAGAACTTCAAAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440051.1
CDS-3UTR GCA 90 bp AAGGCACTTGGTAGCAGGGGGAAAGAGCAAGGTGGGGCCCAGCTGGTCTCAGAGACCATCATGGCAAAGTaGTCTGCTTCCTCTAGCCAG +
Preference number: 4 (lower is better)
Translates to: KALGSRGKEQGGAQLVSETIMAK*SASSSQ
Trigger: CTGGCTAGAGGAAGCAGAGCACTTTGCCATGATGGT...CTCTGAGACCAGCTGGGCCCCACCTTGCTCTTTCCCCCTGCTACCAAGTGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCGGTGCAATTCATCTTaGTTGGACTTCAGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDRCNSS*LDFRVA
Trigger: CGCCACCCTGAAGTCCAAGCAAGATGAATTGCACCG...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp GGGCTGCAGCTGCAGAGGCGTTCACTAAAGATGTATTTCCCTGAGGCCCCGCACCGGTGCAATTCATCTTaGTTGGACTTCAGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: GLQLQRRSLKMYFPEAPHRCNSS*LDFRVA
Trigger: CGCCACCCTGAAGTCCAAGCAAGATGAATTGCACCG...GTGCGGGGCCTCAGGGAAATACATCTTTAGTGAACGCCTCTGCAGCTGCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp ATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCATGCAGTGCCTTCCGGTaGAATTCATCTTGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: MYFPEAPHLMPLLPHPDPCSAFR*NSSCLD
Trigger: GTCCAAGCAAGATGAATTGCACCGGAAGGCACTGCA...TGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp AAAGAAATCCAGGAAGGCCCTCTTGGCCCAGCCAAGAGAACGAGGGCTGCAGCTCTCCAGCGTCTGCAGTaGCTTCCGGTGCAATTCATC +
Preference number: 4 (lower is better)
Translates to: KEIQEGPLGPAKRTRAAALQRLQ*LPVQFI
Trigger: GATGAATTGCACCGGAAGGCACTGCAGACGCTGGAG...AGCTGCAGCCCTCGTTCTCTTGGCTGGGCCAAGAGGGCCTTCCTGGATTTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp TCTCATAGTCTTCCCACTTGCCCGCAGTTTCTTCACATTGTGACCGCCCTGGGCCGTGGGCATCATCCTTaGGTACCTTCAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SHSLPTCPQFLHIVTALGRGHHP*VPSGPP
Trigger: AGGAGGCCCTGAAGGTACGCAAGGATGATGCCCACG...GCCCAGGGCGGTCACAATGTGAAGAAACTGCGGGCAAGTGGGAAGACTATGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp AGCCCTCTCCAGCGTCTGCAGTGCCTTCCGGTGCAATTCATCTTGCTTGGACTTAGGGCATGCTGGTGGTaGTTCTGGGCAGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: SPLQRLQCLPVQFILLGLRACWW*FWAEKS
Trigger: GCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCT...AAGTCCAAGCAAGATGAATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp AGAAATCCAGGAAGGCCCTCTTGGCCCAGCCAAGAGAACGAGGGCTGCAGCTGCTTGAAGTTCTCAGGGTaGTCGGTGATGGCCATGTTG +
Preference number: 4 (lower is better)
Translates to: RNPGRPSWPSQENEGCSCLKFSG*SVMAML
Trigger: CAACATGGCCATCACCGAGCACCCTGAGAACTTCAA...GCAGCTGCAGCCCTCGTTCTCTTGGCTGGGCCAAGAGGGCCTTCCTGGATTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp ACATCCAGGGCATGCTGGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGGTTGAAGTTCTCAGGGTaGTCGGTGATGGCCATGTTG +
Preference number: 4 (lower is better)
Translates to: TSRACWWCFWAEKSSASRLKFSG*SVMAML
Trigger: CAACATGGCCATCACCGAGCACCCTGAGAACTTCAA...CCTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCTGGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR GCA 90 bp CAGCATCAGACCCAGGCTATGCATGATGCGCACGCCATCTGGGTTCACCGTGAGAAGCTGTACAGGGTCTaGCACAGCCTCAGCACTTGT +
Preference number: 4 (lower is better)
Translates to: QHQTQAMHDAHAIWVHREKLYRV*HSLSTC
Trigger: ACAAGTGCTGAGGCTGTGGCAGACCCTGTACAGCTT...CTCACGGTGAACCCAGATGGCGTGCGCATCATGCATAGCCTGGGTCTGATGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp GGGCAAGCAGGGGCAATGCAGGAATCATCTACTAACTCCAAGTCTGAGAAGGGAAGCTGCATGGGGCCCTaGTTCAGGACCGAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: GQAGAMQESSTNSKSEKGSCMGP*FRTEEG
Trigger: GCCCTCTTCGGTCCTGAAGCAGGGCCCCATGCAGCT...TCCCTTCTCAGACTTGGAGTTAGTAGATGATTCCTGCATTGCCCCTGCTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp GGGCTGCAGCTGCAGAGGCGTTCACTAAAGATGTATTTCCCTGAGGCCCCGCACGCTTCCTTGAGGTGCTaGTGCTCCATGAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: GLQLQRRSLKMYFPEAPHASLRC*CSMNSS
Trigger: TGAGCTGTTCATGGAGCAGCAGCACCTCAAGGAAGC...GTGCGGGGCCTCAGGGAAATACATCTTTAGTGAACGCCTCTGCAGCTGCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp TCCTTTTCTAGGCCTCCCAGCTGGGAGAAGCTGTACAGGGTCTGCCACAGCCTCTGCTTCAGACAAGCCTaGTTCCCCTCCAAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: SFSRPPSWEKLYRVCHSLCFRQA*FPSKGF
Trigger: GAAACCCTTGGAGGGGAAGCAGGCTTGTCTGAAGCA...GAGGCTGTGGCAGACCCTGTACAGCTTCTCCCAGCTGGGAGGCCTAGAAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR GCA 90 bp TCCAGGGCATGCTGGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGGTGGAAGAAGCCGGAGGCATaGTTTGATGACAAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: SRACWWCFWAEKSSASRWKKPEA*FDDKSL
Trigger: GAGGCTTTTGTCATCAAAGCATGCCTCCGGCTTCTT...CCACCTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR CCA 90 bp GCTCCATGGCACTGGAGATCTGTCGGACGAGGGCCAGCTGCAGCGAGACATAGAAGTTCTGAGTTGCTTTaGTCTCCACAGTCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: APWHWRSVGRGPAAARHRSSELL*SPQSAA
Trigger: TGCTGCGGACTGTGGAGACCAAAGCAACTCAGAACT...TCTATGTCTCGCTGCAGCTGGCCCTCGTCCGACAGATCTCCAGTGCCATGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACTCAGGAGGTCATAGATaGCTGCGGCATTCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDSGGHR*LRHSAS
Trigger: GCTTGCAGAATGCCGCAGCCATCTATGACCTCCTGA...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp CAGCTGCTGAGCCCTCTCCAGCGTCTGCAGTGCCTTCCGGTGCAATTCATCTTGTCAGGAGGTCATAGATaGCTGCGGCATTCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: QLLSPLQRLQCLPVQFILSGGHR*LRHSAS
Trigger: GCTTGCAGAATGCCGCAGCCATCTATGACCTCCTGA...CAAGATGAATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGCTCAGCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR CCA 90 bp AGCCCTCTCCAGCGTCTGCAGTGCCTTCCGGTGCAATTCATCTTGCTTGGACTTTGCTGGTGGTGCTTCTaGGCAGAGAAGAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: SPLQRLQCLPVQFILLGLCWWCF*AEKSSA
Trigger: GGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCA...AAGTCCAAGCAAGATGAATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp TCTCATAGTCTTCCCACTTGCCCGCAGTTTCTTCACATTGTGACCGCCCTGGGCACATCCAGGGCATGCTaGTGGTGCTTCTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SHSLPTCPQFLHIVTALGTSRAC*WCFWAE
Trigger: CTCTGCCCAGAAGCACCACCAGCATGCCCTGGATGT...GCCCAGGGCGGTCACAATGTGAAGAAACTGCGGGCAAGTGGGAAGACTATGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCAGAGTCTGCATCATaGGCATCAGGCAAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDPESAS*ASGKVR
Trigger: CCTGACTTTGCCTGATGCCCATGATGCAGACTCTGG...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp CCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCAGTTGGTCCACAGCTGCATaGGGCCCTGCTTCAGGACCG +
Preference number: 4 (lower is better)
Translates to: PSLRREPRNLIVFPLARSWSTAA*GPASGP
Trigger: CGGTCCTGAAGCAGGGCCCCATGCAGCTGTGGACCA...ACTGCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp CCAGCTCTTGGGGAGCAAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGCCAGGAAGGCCCTCTTaGCCCAGCCAAGAGAACGAG +
Preference number: 4 (lower is better)
Translates to: PALGEQVWSPQNSPKALRPGRPS*PSQENE
Trigger: CTCGTTCTCTTGGCTGGGCCAAGAGGGCCTTCCTGG...CCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTTGCTCCCCAAGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp ATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACTTGGGGAGCAAGTCTaGTCACCACAAAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: MYFPEAPHLMPLLPHPDPLGEQV*SPQNSP
Trigger: TGGAGAGTTTTGTGGTGACCAGACTTGCTCCCCAAG...TGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp TCTCATAGTCTTCCCACTTGCCCGCAGTTTCTTCACATTGTGACCGCCCTGGGCGGTGCTCAGTACCCCTaGTCAGACCCCAAAGGCACT +
Preference number: 4 (lower is better)
Translates to: SHSLPTCPQFLHIVTALGGAQYP*SDPKGT
Trigger: AGTGCCTTTGGGGTCTGACCAGGGGTACTGAGCACC...GCCCAGGGCGGTCACAATGTGAAGAAACTGCGGGCAAGTGGGAAGACTATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp ACTCCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCCTTCAGGGGTCGCCCTaGACAGGTCAGAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: TPSLRREPRNLIVFPLARLQGSP*TGQRPG
Trigger: TCCTGGCCTCTGACCTGTCCAGGGCGACCCCTGAAG...GCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTTTTGGGAGGCGGAGGTaGTGGGAGGATTGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPFGRRR*WEDCLN
Trigger: GTTCAAGCAATCCTCCCACCACCTCCGCCTCCCAAA...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409245.5
CDS-3UTR CCA 90 bp AGGCCTTTGAAGTTCTCAGGGTGCTCGGTGATGGCCATGTTGACAACATCCAGGGCTTGGACTTCAGGGTaGCCAGCGAAGGGACCCGAT +
Preference number: 4 (lower is better)
Translates to: RPLKFSGCSVMAMLTTSRAWTSG*PAKGPD
Trigger: ATCGGGTCCCTTCGCTGGCCACCCTGAAGTCCAAGC...CCTGGATGTTGTCAACATGGCCATCACCGAGCACCCTGAGAACTTCAAAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440051.1
CDS-3UTR TCA 90 bp AACATCCAGGGCATGCTGGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGTGGCCGCCATCACTTTaGAGTTCTGAGTTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: NIQGMLVVLLGREEQCQQWPPSL*SSELLW
Trigger: CCAAAGCAACTCAGAACTTCAAAGTGATGGCGGCCA...CTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCTGGATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR TCA 90 bp AGACCTGAGAGAGATCCAGAAGTCTGTACTGTGCTGAGAGTGGGGAGTGAGAACTCTCCTCCTTGCCCATaGACTCAGGCAGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: RPERDPEVCTVLRVGSENSPPCP*TQAEGG
Trigger: CCCACCCTCTGCCTGAGTTCATGGGCAAGGAGGAGA...GTTCTCACTCCCCACTCTCAGCACAGTACAGACTTCTGGATCTCTCTCAGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp ACTCCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCTCTCCTCCTTGCCCATaGACTCAGGCAGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: TPSLRREPRNLIVFPLARSPPCP*TQAEGG
Trigger: CCCACCCTCTGCCTGAGTTCATGGGCAAGGAGGAGA...GCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp AGACCTGAGAGAGATCCAGAAGTCTGTACTGTGCTGAGAGTGGGGAGTGAGAACGGCACTCCGAGAGCATaGCGTACTGTCCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: RPERDPEVCTVLRVGSENGTPRA*RTVPFC
Trigger: GCAGAAGGGGACAGTACGTCATGCTCTCGGAGTGCC...GTTCTCACTCCCCACTCTCAGCACAGTACAGACTTCTGGATCTCTCTCAGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp TGGGCAAGACCTGAGAGAGATCCAGAAGTCTGTACTGTGCTGAGAGTGGGGAGTGGACACAGCGTAGGCTaGCTTCCCACAAGCCACCAT +
Preference number: 4 (lower is better)
Translates to: WARPERDPEVCTVLRVGSGHSVG*LPTSHH
Trigger: ATGGTGGCTTGTGGGAAGTCAGCCTACGCTGTGTCC...ACTCCCCACTCTCAGCACAGTACAGACTTCTGGATCTCTCTCAGGTCTTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp AGGTTGAAGTTCTCAGGGTGCTCGGTGATGGCCATGTTGACAACATCCAGGGCAGGACACAGCGTAGGCTaGCTTCCCACAAGCCACCAT +
Preference number: 4 (lower is better)
Translates to: RLKFSGCSVMAMLTTSRAGHSVG*LPTSHH
Trigger: ATGGTGGCTTGTGGGAAGTCAGCCTACGCTGTGTCC...TGCCCTGGATGTTGTCAACATGGCCATCACCGAGCACCCTGAGAACTTCAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR TCA 90 bp CACTTGCCCGCAGTTTCTTCACATTGTGACCGCCCTGGGCAAGACCTGAGAGAGCTTCCTCTCCGAGGCTaGTCACCATCATGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: HLPAVSSHCDRPGQDLRELPLRG*SPSWQS
Trigger: ACTTTGCCATGATGGTGATCAGCCTCGGAGAGGAAG...CTCTCTCAGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACTGCGGGCAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp GCTCAAGGCTGGTGTGGGAGCTACATGCCCAGTGAATATACATGCTGCTTCAGACCTGCAGGCTATAGGTaGGACCCAGAGCCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: AQGWCGSYMPSEYTCCFRPAGYR*DPEPGS
Trigger: GCTACCTGGCTCTGGGTCTCACCTATAGCCTGCAGG...TCTGAAGCAGCATGTATATTCACTGGGCATGTAGCTCCCACACCAGCCTTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR TCA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCGCATATAGAGTACTaGGTGAGAAGTGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDPHIEY*VRSGEE
Trigger: CTCTTCCCCACTTCTCACTCAGTACTCTATATGCGG...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp GCTCAAGGCTGGTGTGGGAGCTACATGCCCAGTGAATATACATGCTGCTTCAGAGACCCAGGCTATGCATaGTGCGCACGCCATCTGGGT +
Preference number: 4 (lower is better)
Translates to: AQGWCGSYMPSEYTCCFRDPGYA*CARHLG
Trigger: ACCCAGATGGCGTGCGCATCATGCATAGCCTGGGTC...TCTGAAGCAGCATGTATATTCACTGGGCATGTAGCTCCCACACCAGCCTTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR TCA 90 bp TCTCATAGTCTTCCCACTTGCCCGCAGTTTCTTCACATTGTGACCGCCCTGGGCAGAGCTCTCTGGGGATaGTGGAGAAGGGCAGTACAG +
Preference number: 4 (lower is better)
Translates to: SHSLPTCPQFLHIVTALGRALWG*WRRAVQ
Trigger: CTGTACTGCCCTTCTCCATCATCCCCAGAGAGCTCT...GCCCAGGGCGGTCACAATGTGAAGAAACTGCGGGCAAGTGGGAAGACTATGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp CCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGACTGTTTCCCAAGGCAACTGTTGCCCCACCCTaGCCCACGTTCCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PQNSPKALRVQVRLFPKATVAPP*PTFPAA
Trigger: GGCAGCAGGGAACGTGGGTCAGGGTGGGGCAACAGT...TGCCTTGGGAAACAGTCTGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp AAAGAAATCCAGGAAGGCCCTCTTGGCCCAGCCAAGAGAACGAGGGCTGCAGCTAGTTTCTTCACATTGTaGCCGCCCTGGGCAAGACCT +
Preference number: 4 (lower is better)
Translates to: KEIQEGPLGPAKRTRAAASFFTL*PPWARP
Trigger: AGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACT...AGCTGCAGCCCTCGTTCTCTTGGCTGGGCCAAGAGGGCCTTCCTGGATTTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp TGGGTGGAGATGGAAGTGTTAGGGCCGGTGCTCAGTACCCCTGGTCAGACCCCACCACTTTGGGCACCCTaGGATAAACCAACAGCATTT +
Preference number: 4 (lower is better)
Translates to: WVEMEVLGPVLSTPGQTPPLWAP*DKPTAF
Trigger: AAATGCTGTTGGTTTATCTCAGGGTGCCCAAAGTGG...TGGGGTCTGACCAGGGGTACTGAGCACCGGCCCTAACACTTCCATCTCCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR GCA 90 bp CAAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGACTGGGCATGCTCAGCGTCTaGAGCTGCCGGACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QVWSPQNSPKALRVQVRLGMLSV*SCRTSS
Trigger: GGAGCTGGTCCGGCAGCTGCAGACGCTGAGCATGCC...CAGTCTGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000394850.6
CDS-3UTR GCA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTCCACGTAATGCAGTTTaGCCAGGATCAGCATGGCCT +
Preference number: 4 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPPRNAV*PGSAWP
Trigger: AGGCCATGCTGATCCTGGGCAAACTGCATTACGTGG...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp TTCAAGTCAGACTGTTTCCCAAGGCACCAACAAAGAAATCCAGGAAGGCCCTCTTCCTCACTCAGGGAGTaGAGCAGGACCCCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: FKSDCFPRHQQRNPGRPSSSLRE*SRTPAR
Trigger: CCTGGCGGGGGTCCTGCTGCACTCCCTGAGTGAGGA...AGAGGGCCTTCCTGGATTTCTTTGTTGGTGCCTTGGGAAACAGTCTGACTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp CTGTGGGTGGTGAGATGTACTGGGGACAGTCCTAGAAACTGCCTACCTCCATGTATGGCTGCGGCATTCTaGAAGCTCACTGTCCGGTCC +
Preference number: 4 (lower is better)
Translates to: LWVVRCTGDSPRNCLPPCMAAAF*KLTVRS
Trigger: GGACCGGACAGTGAGCTTGCAGAATGCCGCAGCCAT...ACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCTCACCACCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGAGGTCATAGATGGCTaGGGCATTCTGCAAGCTCAC +
Preference number: 4 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPEVIDG*GILQAH
Trigger: GTGAGCTTGCAGAATGCCGCAGCCATCTATGACCTC...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp CACTTGCCCGCAGTTTCTTCACATTGTGACCGCCCTGGGCAAGACCTGAGAGAGGAGGTCATAGATGGCTaGGGCATTCTGCAAGCTCAC +
Preference number: 4 (lower is better)
Translates to: HLPAVSSHCDRPGQDLREEVIDG*GILQAH
Trigger: GTGAGCTTGCAGAATGCCGCAGCCATCTATGACCTC...CTCTCTCAGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACTGCGGGCAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp GGGCAAGCAGGGGCAATGCAGGAATCATCTACTAACTCCAAGTCTGAGAAGGGAAGCGAAGGGACCCGATaGAGACCTTCGCGGCCATCA +
Preference number: 4 (lower is better)
Translates to: GQAGAMQESSTNSKSEKGSEGTR*RPSRPS
Trigger: TGATGGCCGCGAAGGTCTGCATCGGGTCCCTTCGCT...TCCCTTCTCAGACTTGGAGTTAGTAGATGATTCCTGCATTGCCCCTGCTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACACCATCATGGCAAAGTaGTCTGCTTCCTCTAGCCAG +
Preference number: 4 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDTIMAK*SASSSQ
Trigger: CTGGCTAGAGGAAGCAGAGCACTTTGCCATGATGGT...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp CCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCAGTGCCCTCTCCAGCGTCTaGAGTGCCTTCCGGTGCAAT +
Preference number: 4 (lower is better)
Translates to: PSLRREPRNLIVFPLARSALSSV*SAFRCN
Trigger: ATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGC...ACTGCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp CTCTGGGCCTTTCAGCACCTGCTCCAGCTTCACCTTGGTGAACATCAGGTTGAACGTGGGCATCATCCTTaGGTACCTTCAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LWAFQHLLQLHLGEHQVERGHHP*VPSGPP
Trigger: AGGAGGCCCTGAAGGTACGCAAGGATGATGCCCACG...TTCAACCTGATGTTCACCAAGGTGAAGCTGGAGCAGGTGCTGAAAGGCCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp AACACTCTCACCAGCTCAAATCCACATTTTCCCAGAGGGTCCTCCCTCCCATCCAGGGCATGCTGGTGGTaGTTCTGGGCAGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: NTLTSSNPHFPRGSSLPSRACWW*FWAEKS
Trigger: GCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCT...GGATGGGAGGGAGGACCCTCTGGGAAAATGTGGATTTGAGCTGGTGAGAGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR GCA 90 bp GCTATGCATGATGCGCACGCCATCTGGGTTCACCGTGAGCGCCTCCTTGTACAGGCAAAGTCAGGTGCATaGCACTCTGCTTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: AMHDAHAIWVHRERLLVQAKSGA*HSASSW
Trigger: CCATGAAGAAGCAGAGTGGCATGCACCTGACTTTGC...CTGTACAAGGAGGCGCTCACGGTGAACCCAGATGGCGTGCGCATCATGCATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACTCAGGCAAAGTCAGGTaGATGCCACTCTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDSGKVR*MPLCFF
Trigger: GAAGAAGCAGAGTGGCATGCACCTGACTTTGCCTGA...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp GATGTTCCCCTTCTTCAGGTTTTTCACATAGGCGCTCTGGAGGGCAGCTTCCAGCCGGGAGCCAGAGTCTaGATCATGGGCATCAGGCAA +
Preference number: 4 (lower is better)
Translates to: DVPLLQVFHIGALEGSFQPGARV*IMGIRQ
Trigger: TTGCCTGATGCCCATGATGCAGACTCTGGCTCCCGG...CTGGAAGCTGCCCTCCAGAGCGCCTATGTGAAAAACCTGAAGAAGGGGAACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR GCA 90 bp AGCCCTCTCCAGCGTCTGCAGTGCCTTCCGGTGCAATTCATCTTGCTTGGACTTCCTGCTTCCTTGAGGTaGTGCTGCTCCATGAACAGC +
Preference number: 4 (lower is better)
Translates to: SPLQRLQCLPVQFILLGLPASLR*CCSMNS
Trigger: GCTGTTCATGGAGCAGCAGCACCTCAAGGAAGCAGG...AAGTCCAAGCAAGATGAATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTATCAGACCCAGGCTATaGATGATGCGCACGCCATCT +
Preference number: 4 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPIRPRL*MMRTPS
Trigger: AGATGGCGTGCGCATCATGCATAGCCTGGGTCTGAT...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp AAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGACTGTACCTCGCCCAGGCCCTaGCACGCCTCGTGGCACGTA +
Preference number: 4 (lower is better)
Translates to: KSGHHKTLQRHLGFKSDCTSPRP*HASWHV
Trigger: TACGTGCCACGAGGCGTGGCAGGGCCTGGGCGAGGT...ACAGTCTGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp TACATGCCCAGTGAATATACATGCTGCTTCAGACAAGCCTGCTTCCCCTCCAAGAGGGCAGTACAGGGCTaGTGGCCTCCAGCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: YMPSEYTCCFRQACFPSKRAVQG*WPPAQG
Trigger: CCCTTGAGCTGGAGGCCAGCAGCCCTGTACTGCCCT...CTTGGAGGGGAAGCAGGCTTGTCTGAAGCAGCATGTATATTCACTGGGCATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR GCA 90 bp ACATCCAGGGCATGCTGGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGGCCCAGTGAATATACATaGTGCTTCAGACAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: TSRACWWCFWAEKSSASRPSEYT*CFRQAC
Trigger: GCAGGCTTGTCTGAAGCAGCATGTATATTCACTGGG...CCTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCTGGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR CCA 90 bp GGGCAAGCAGGGGCAATGCAGGAATCATCTACTAACTCCAAGTCTGAGAAGGGATCGCGGGCGCTGTCATaGAAGGTGCGGCCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: GQAGAMQESSTNSKSEKGSRALS*KVRPRS
Trigger: ACTTCTTGGCCGCACCTTCCATGACAGCGCCCGCGA...TCCCTTCTCAGACTTGGAGTTAGTAGATGATTCCTGCATTGCCCCTGCTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000394850.6
CDS-3UTR CCA 90 bp CCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCTGTGGAGTCTTTTATTTTaGCATGGTTCTCCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: PEAPHLMPLLPHPDPRSLWSLLF*HGSPSN
Trigger: GTTTGAAGGAGAACCATGCCAAAATAAAAGACTCCA...CAGGGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
CDS-3UTR CCA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTTGCCCAGGATCAGCATaGCCTCACACATGTACTGTG +
Preference number: 4 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPCPGSA*PHTCTV
Trigger: CACAGTACATGTGTGAGGCCATGCTGATCCTGGGCA...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp AGGAACTCCCCGGCTTCCTCTCCGAGGCTGATCACCATCATGGCAAAGTGCTCTGGGGCTTGTTCTCCATaGACATGTCATCAATCCCGG +
Preference number: 4 (lower is better)
Translates to: RNSPASSPRLITIMAKCSGACSP*TCHQSR
Trigger: CCGGGATTGATGACATGTCCATGGAGAACAAGCCCC...AGAGCACTTTGCCATGATGGTGATCAGCCTCGGAGAGGAAGCCGGGGAGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp AAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGACTGTCCATCAGGGGCACGGTaGGGTCCGAGGGCCGCAACT +
Preference number: 4 (lower is better)
Translates to: KSGHHKTLQRHLGFKSDCPSGAR*GPRAAT
Trigger: AGTTGCGGCCCTCGGACCCCACCGTGCCCCTGATGG...ACAGTCTGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGCAATTCATCTTGCTTaGACTTCAGGGTGGCGTCGG +
Preference number: 4 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPAIHLA*TSGWRR
Trigger: CCGACGCCACCCTGAAGTCCAAGCAAGATGAATTGC...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp AGACCTGAGAGAGATCCAGAAGTCTGTACTGTGCTGAGAGTGGGGAGTGAGAACGCTGCTCCATGGCACTaGAGATCTGTCGGACGAGGG +
Preference number: 4 (lower is better)
Translates to: RPERDPEVCTVLRVGSENAAPWH*RSVGRG
Trigger: CCCTCGTCCGACAGATCTCCAGTGCCATGGAGCAGC...GTTCTCACTCCCCACTCTCAGCACAGTACAGACTTCTGGATCTCTCTCAGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp CCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCAGTGCTGCTCCATGGCACTaGAGATCTGTCGGACGAGGG +
Preference number: 4 (lower is better)
Translates to: PSLRREPRNLIVFPLARSAAPWH*RSVGRG
Trigger: CCCTCGTCCGACAGATCTCCAGTGCCATGGAGCAGC...ACTGCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp AGACCTGAGAGAGATCCAGAAGTCTGTACTGTGCTGAGAGTGGGGAGTGAGAACCACGAGGGCTTCCTCTaGGCCTTTCAGCACCTGCTC +
Preference number: 4 (lower is better)
Translates to: RPERDPEVCTVLRVGSENHEGFL*AFQHLL
Trigger: GAGCAGGTGCTGAAAGGCCCAGAGGAAGCCCTCGTG...GTTCTCACTCCCCACTCTCAGCACAGTACAGACTTCTGGATCTCTCTCAGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp TTAGCAACACTCTCACCAGCTCAAATCCACATTTTCCCAGAGGGTCCTCCCTCCCACGAGGGCTTCCTCTaGGCCTTTCAGCACCTGCTC +
Preference number: 4 (lower is better)
Translates to: LATLSPAQIHIFPEGPPSHEGFL*AFQHLL
Trigger: GAGCAGGTGCTGAAAGGCCCAGAGGAAGCCCTCGTG...GGAGGGAGGACCCTCTGGGAAAATGTGGATTTGAGCTGGTGAGAGTGTTGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp CCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCAGTGTACTGAGTGAGAAGTaGGGAAGAGGCCCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: PSLRREPRNLIVFPLARSVLSEK*GRGPPP
Trigger: AGGCGGCGGGCCTCTTCCCCACTTCTCACTCAGTAC...ACTGCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp TTCAAGTCAGACTGTTTCCCAAGGCACCAACAAAGAAATCCAGGAAGGCCCTCTGCAGTACAGGGCTGCTaGCCTCCAGCTCAAGGGCGG +
Preference number: 4 (lower is better)
Translates to: FKSDCFPRHQQRNPGRPSAVQGC*PPAQGR
Trigger: CCGCCCTTGAGCTGGAGGCCAGCAGCCCTGTACTGC...AGAGGGCCTTCCTGGATTTCTTTGTTGGTGCCTTGGGAAACAGTCTGACTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp TGGGTGGTGAGATGTACTGGGGACAGTCCTAGAAACTGCCTACCTCCATGTTGGGGTGCTCAGTACCCCTaGTCAGACCCCAAAGGCACT +
Preference number: 4 (lower is better)
Translates to: WVVRCTGDSPRNCLPPCWGAQYP*SDPKGT
Trigger: AGTGCCTTTGGGGTCTGACCAGGGGTACTGAGCACC...CCAACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCTCACCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp CTCTGGGCCTTTCAGCACCTGCTCCAGCTTCACCTTGGTGAACATCAGGTTGAAGGTGCTCAGTACCCCTaGTCAGACCCCAAAGGCACT +
Preference number: 4 (lower is better)
Translates to: LWAFQHLLQLHLGEHQVEGAQYP*SDPKGT
Trigger: AGTGCCTTTGGGGTCTGACCAGGGGTACTGAGCACC...TTCAACCTGATGTTCACCAAGGTGAAGCTGGAGCAGGTGCTGAAAGGCCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR CCA 90 bp TACATGCCCAGTGAATATACATGCTGCTTCAGACAAGCCTGCTTCCCCTCCAAGGGAGGCTGCTTGGGCTaGAGCACATCGCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: YMPSEYTCCFRQACFPSKGGCLG*STSPGR
Trigger: TCTCCCTGGCGATGTGCTCCAGCCCAAGCAGCCTCC...CTTGGAGGGGAAGCAGGCTTGTCTGAAGCAGCATGTATATTCACTGGGCATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp CCAGCTCTTGGGGAGCAAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGTGCCTACCTCCATGTTaGTGGCCCTCAAGGGACCTG +
Preference number: 4 (lower is better)
Translates to: PALGEQVWSPQNSPKALRCLPPC*WPSRDL
Trigger: CAGGTCCCTTGAGGGCCACCAACATGGAGGTAGGCA...CCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTTGCTCCCCAAGAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp CTGGTCTCAGAGGGCAAGCAGGGGCAATGCAGGAATCATCTACTAACTCCAAGTCCCGTGCGTACATGCTaGTGGCATCTCGGTATGAGC +
Preference number: 4 (lower is better)
Translates to: LVSEGKQGQCRNHLLTPSPVRTC*WHLGMS
Trigger: GCTCATACCGAGATGCCATCAGCATGTACGCACGGG...ACTTGGAGTTAGTAGATGATTCCTGCATTGCCCCTGCTTGCCCTCTGAGACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp AGACCTGAGAGAGATCCAGAAGTCTGTACTGTGCTGAGAGTGGGGAGTGAGAACCCCGTGCGTACATGCTaGTGGCATCTCGGTATGAGC +
Preference number: 4 (lower is better)
Translates to: RPERDPEVCTVLRVGSENPVRTC*WHLGMS
Trigger: GCTCATACCGAGATGCCATCAGCATGTACGCACGGG...GTTCTCACTCCCCACTCTCAGCACAGTACAGACTTCTGGATCTCTCTCAGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp ACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCAGTTTCTTCACATTGTGACCTCCTGCAGGAACACCTaGGCGATCCAGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: TQKSHSLPTCPQFLHIVTSCRNT*AIQEAL
Trigger: GAGGGCCTCCTGGATCGCTCAGGTGTTCCTGCAGGA...GGTCACAATGTGAAGAAACTGCGGGCAAGTGGGAAGACTATGAGATTTCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp TCTCATAGTCTTCCCACTTGCCCGCAGTTTCTTCACATTGTGACCGCCCTGGGCCTTCCAGGAAGTAGGTaGGCTCATAGTCAAGCGGGT +
Preference number: 4 (lower is better)
Translates to: SHSLPTCPQFLHIVTALGLPGSR*AHSQAG
Trigger: ACCCGCTTGACTATGAGCTCACCTACTTCCTGGAAG...GCCCAGGGCGGTCACAATGTGAAGAAACTGCGGGCAAGTGGGAAGACTATGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTATCACTTTGAAGTTCTaGGTTGCTTTGGTCTCCACA +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRITLKF*VALVST
Trigger: TGTGGAGACCAAAGCAACTCAGAACTTCAAAGTGAT...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp CACTTGCCCGCAGTTTCTTCACATTGTGACCGCCCTGGGCAAGACCTGAGAGAGTGGCCGCCATCACTTTaGAGTTCTGAGTTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: HLPAVSSHCDRPGQDLREWPPSL*SSELLW
Trigger: CCAAAGCAACTCAGAACTTCAAAGTGATGGCGGCCA...CTCTCTCAGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACTGCGGGCAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp GGGCAAGCAGGGGCAATGCAGGAATCATCTACTAACTCCAAGTCTGAGAAGGGAGGACACAGCGTAGGCTaGCTTCCCACAAGCCACCAT +
Preference number: 4 (lower is better)
Translates to: GQAGAMQESSTNSKSEKGGHSVG*LPTSHH
Trigger: ATGGTGGCTTGTGGGAAGTCAGCCTACGCTGTGTCC...TCCCTTCTCAGACTTGGAGTTAGTAGATGATTCCTGCATTGCCCCTGCTTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp AGCCAGAGTCTGCATCATGGGCATCAGGCAAAGTCAGGTGCATGCCACTCTGCTCTTCCTCTCCGAGGCTaGTCACCATCATGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: SQSLHHGHQAKSGACHSALPLRG*SPSWQS
Trigger: ACTTTGCCATGATGGTGATCAGCCTCGGAGAGGAAG...AGCAGAGTGGCATGCACCTGACTTTGCCTGATGCCCATGATGCAGACTCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR TCA 90 bp CAAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGACTGGCGAGACATAGAGGATaGCCTGGGGGTCACTGGGCG +
Preference number: 4 (lower is better)
Translates to: QVWSPQNSPKALRVQVRLARHRG*PGGHWA
Trigger: CGCCCAGTGACCCCCAGGTCATCCTCTATGTCTCGC...CAGTCTGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp TCCCGGAGCTCTCTCATGCCCTTCACGATGTTCCCCTTCTTCAGGTTTTTCACATCTGCTTCTTCATGGTaGGGCCCTCACCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: SRSSLMPFTMFPFFRFFTSASSW*GPHRSC
Trigger: GCAGCTTCGGTGAGGGCCTCACCATGAAGAAGCAGA...TGTGAAAAACCTGAAGAAGGGGAACATCGTGAAGGGCATGAGAGAGCTCCGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR TCA 90 bp CCAGCTCTTGGGGAGCAAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGAAAGATGTATTTCCCTaGGGCCCCGCACCTGATGCC +
Preference number: 4 (lower is better)
Translates to: PALGEQVWSPQNSPKALRKDVFP*GPAPDA
Trigger: GGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTT...CCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTTGCTCCCCAAGAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp ACTCCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCGCCCTGGGCAAGACCTaGGAGAGATCCAGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: TPSLRREPRNLIVFPLARALGKT*ERSRSL
Trigger: CAGACTTCTGGATCTCTCTCAGGTCTTGCCCAGGGC...GCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp AAGGCACTTGGTAGCAGGGGGAAAGAGCAAGGTGGGGCCCAGCTGGTCTCAGAGGCAGGAGTAATGTGTTaGCTCAGGGTATTAGAAAGG +
Preference number: 4 (lower is better)
Translates to: KALGSRGKEQGGAQLVSEAGVMC*LRVLER
Trigger: CCTTTCTAATACCCTGAGTCAACACATTACTCCTGC...CTCTGAGACCAGCTGGGCCCCACCTTGCTCTTTCCCCCTGCTACCAAGTGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp TGGGTGGAGATGGAAGTGTTAGGGCCGGTGCTCAGTACCCCTGGTCAGACCCCAGCAGGAGTAATGTGTTaGCTCAGGGTATTAGAAAGG +
Preference number: 4 (lower is better)
Translates to: WVEMEVLGPVLSTPGQTPAGVMC*LRVLER
Trigger: CCTTTCTAATACCCTGAGTCAACACATTACTCCTGC...TGGGGTCTGACCAGGGGTACTGAGCACCGGCCCTAACACTTCCATCTCCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp TACATGCCCAGTGAATATACATGCTGCTTCAGACAAGCCTGCTTCCCCTCCAAGCAGAGGTGGCCAATCTaGACAAGGCCCAGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: YMPSEYTCCFRQACFPSKQRWPI*TRPRSL
Trigger: GAGGGACCTGGGCCTTGTTCAGATTGGCCACCTCTG...CTTGGAGGGGAAGCAGGCTTGTCTGAAGCAGCATGTATATTCACTGGGCATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR GCA 90 bp TCTCATAGTCTTCCCACTTGCCCGCAGTTTCTTCACATTGTGACCGCCCTGGGCCCACGTAATGCAGTTTaGCCAGGATCAGCATGGCCT +
Preference number: 4 (lower is better)
Translates to: SHSLPTCPQFLHIVTALGPRNAV*PGSAWP
Trigger: AGGCCATGCTGATCCTGGGCAAACTGCATTACGTGG...GCCCAGGGCGGTCACAATGTGAAGAAACTGCGGGCAAGTGGGAAGACTATGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp AAGGCACTTGGTAGCAGGGGGAAAGAGCAAGGTGGGGCCCAGCTGGTCTCAGAGTCAGATGCCTCGACGTaGTGTTATTTGTGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: KALGSRGKEQGGAQLVSESDAST*CYLWSS
Trigger: AGAAGACCACAAATAACAGCACGTCGAGGCATCTGA...CTCTGAGACCAGCTGGGCCCCACCTTGCTCTTTCCCCCTGCTACCAAGTGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp ACATCCAGGGCATGCTGGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGGTCAGATGCCTCGACGTaGTGTTATTTGTGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: TSRACWWCFWAEKSSASRSDAST*CYLWSS
Trigger: AGAAGACCACAAATAACAGCACGTCGAGGCATCTGA...CCTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCTGGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTCACCACATCTCGAGTTaGCATGGATTCGCTGATGAG +
Preference number: 4 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPHHISS*HGFADE
Trigger: CTCATCAGCGAATCCATGGCAACTCGAGATGTGGTG...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp AAAGAAATCCAGGAAGGCCCTCTTGGCCCAGCCAAGAGAACGAGGGCTGCAGCTTGCAGTGCCTTCCGGTaGAATTCATCTTGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: KEIQEGPLGPAKRTRAAACSAFR*NSSCLD
Trigger: GTCCAAGCAAGATGAATTGCACCGGAAGGCACTGCA...AGCTGCAGCCCTCGTTCTCTTGGCTGGGCCAAGAGGGCCTTCCTGGATTTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTTTGAAGTTCTCAGGGTaGTCGGTGATGGCCATGTTG +
Preference number: 4 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPLKFSG*SVMAML
Trigger: CAACATGGCCATCACCGAGCACCCTGAGAACTTCAA...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp AGACCTGAGAGAGATCCAGAAGTCTGTACTGTGCTGAGAGTGGGGAGTGAGAACGCCTCAGCACTTGTCTaGAGGTCACGAGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: RPERDPEVCTVLRVGSENASALV*RSRGLP
Trigger: AGGAAGCCCTCGTGACCTGCAGACAAGTGCTGAGGC...GTTCTCACTCCCCACTCTCAGCACAGTACAGACTTCTGGATCTCTCTCAGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp TCTCATAGTCTTCCCACTTGCCCGCAGTTTCTTCACATTGTGACCGCCCTGGGCAAGCTGTACAGGGTCTaGCACAGCCTCAGCACTTGT +
Preference number: 4 (lower is better)
Translates to: SHSLPTCPQFLHIVTALGKLYRV*HSLSTC
Trigger: ACAAGTGCTGAGGCTGTGGCAGACCCTGTACAGCTT...GCCCAGGGCGGTCACAATGTGAAGAAACTGCGGGCAAGTGGGAAGACTATGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp TTAGCAACACTCTCACCAGCTCAAATCCACATTTTCCCAGAGGGTCCTCCCTCCGGCCCTCACCGAAGCTaGCATCCTTTTCTAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LATLSPAQIHIFPEGPPSGPHRS*HPFLGL
Trigger: GAGGCCTAGAAAAGGATGGCAGCTTCGGTGAGGGCC...GGAGGGAGGACCCTCTGGGAAAATGTGGATTTGAGCTGGTGAGAGTGTTGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR GCA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGCAAAGTCAGGTGCATaGCACTCTGCTTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPAKSGA*HSASSW
Trigger: CCATGAAGAAGCAGAGTGGCATGCACCTGACTTTGC...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp CACTTGCCCGCAGTTTCTTCACATTGTGACCGCCCTGGGCAAGACCTGAGAGAGTCAGGCAAAGTCAGGTaGATGCCACTCTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: HLPAVSSHCDRPGQDLRESGKVR*MPLCFF
Trigger: GAAGAAGCAGAGTGGCATGCACCTGACTTTGCCTGA...CTCTCTCAGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACTGCGGGCAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp CTGCTCCAGCTTCACCTTGGTGAACATCAGGTTGAAGTTCTCAGGGTGCTCGGTAACAGCTCAGCAGCCTaGAGCCAGATCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LLQLHLGEHQVEVLRVLGNSSAA*SQICSS
Trigger: GCTGGAACAGATCTGGCTGCAGGCTGCTGAGCTGTT...ACCGAGCACCCTGAGAACTTCAACCTGATGTTCACCAAGGTGAAGCTGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp TGGGCAAGACCTGAGAGAGATCCAGAAGTCTGTACTGTGCTGAGAGTGGGGAGTCCTGCTTCCTTGAGGTaGTGCTGCTCCATGAACAGC +
Preference number: 4 (lower is better)
Translates to: WARPERDPEVCTVLRVGSPASLR*CCSMNS
Trigger: GCTGTTCATGGAGCAGCAGCACCTCAAGGAAGCAGG...ACTCCCCACTCTCAGCACAGTACAGACTTCTGGATCTCTCTCAGGTCTTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp TCTCATAGTCTTCCCACTTGCCCGCAGTTTCTTCACATTGTGACCGCCCTGGGCATCAGACCCAGGCTATaGATGATGCGCACGCCATCT +
Preference number: 4 (lower is better)
Translates to: SHSLPTCPQFLHIVTALGIRPRL*MMRTPS
Trigger: AGATGGCGTGCGCATCATGCATAGCCTGGGTCTGAT...GCCCAGGGCGGTCACAATGTGAAGAAACTGCGGGCAAGTGGGAAGACTATGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp TTAGCAACACTCTCACCAGCTCAAATCCACATTTTCCCAGAGGGTCCTCCCTCCTCGTGGCACGTACTCTaGCTCTCCACGGCATCACGA +
Preference number: 4 (lower is better)
Translates to: LATLSPAQIHIFPEGPPSSWHVL*LSTASR
Trigger: TCGTGATGCCGTGGAGAGGCAGAGTACGTGCCACGA...GGAGGGAGGACCCTCTGGGAAAATGTGGATTTGAGCTGGTGAGAGTGTTGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR GCA 90 bp AAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGACTGTCTCCCTCCCTGCGGCTaGAGCGTCGTCAGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: KSGHHKTLQRHLGFKSDCLPPCG*SVVRAL
Trigger: GAGAGCTCTGACGACGCTGCAGCCGCAGGGAGGGAG...ACAGTCTGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp CAGCATCAGACCCAGGCTATGCATGATGCGCACGCCATCTGGGTTCACCGTGAGGGCAAGCAGGGGCAATaGAGGAATCATCTACTAACT +
Preference number: 4 (lower is better)
Translates to: QHQTQAMHDAHAIWVHREGKQGQ*RNHLLT
Trigger: AGTTAGTAGATGATTCCTGCATTGCCCCTGCTTGCC...CTCACGGTGAACCCAGATGGCGTGCGCATCATGCATAGCCTGGGTCTGATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR GCA 90 bp TCCTTTTCTAGGCCTCCCAGCTGGGAGAAGCTGTACAGGGTCTGCCACAGCCTCAATCATCTCGGGAAATaGAGTGCTGAGCTAGTGTGC +
Preference number: 4 (lower is better)
Translates to: SFSRPPSWEKLYRVCHSLNHLGK*SAELVC
Trigger: GCACACTAGCTCAGCACTGCATTTCCCGAGATGATT...GAGGCTGTGGCAGACCCTGTACAGCTTCTCCCAGCTGGGAGGCCTAGAAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR GCA 90 bp AGCATCAGACCCAGGCTATGCATGATGCGCACGCCATCTGGGTTCACCGTGAGCGGTGTGGGAGCTACATaGCCAGTGAATATACATGCT +
Preference number: 4 (lower is better)
Translates to: SIRPRLCMMRTPSGFTVSGVGAT*PVNIHA
Trigger: AGCATGTATATTCACTGGGCATGTAGCTCCCACACC...GCTCACGGTGAACCCAGATGGCGTGCGCATCATGCATAGCCTGGGTCTGATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR GCA 90 bp GGGAGCAAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCATGGCCTCCCTCATCCTaGAACAGCCCCTCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GSKSGHHKTLQRHLGFKSWPPSS*NSPSCP
Trigger: TGGACAGGAGGGGCTGTTGCAGGATGAGGGAGGCCA...TGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTTGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp AGACCTGAGAGAGATCCAGAAGTCTGTACTGTGCTGAGAGTGGGGAGTGAGAACGGGAGGCGATGGAGTTaGGTAGGCGTTCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: RPERDPEVCTVLRVGSENGRRWS*VGVPER
Trigger: TCTCTCTGGAACGCCTACCCAACTCCATCGCCTCCC...GTTCTCACTCCCCACTCTCAGCACAGTACAGACTTCTGGATCTCTCTCAGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp GGGTGGGTGGAGATGGAAGTGTTAGGGCCGGTGCTCAGTACCCCTGGTCAGACCACGTGCTGTTATTTGTaGTCTTCTCCAATTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GWVEMEVLGPVLSTPGQTTCCYL*SSPIPA
Trigger: TGCAGGAATTGGAGAAGACCACAAATAACAGCACGT...GGTCTGACCAGGGGTACTGAGCACCGGCCCTAACACTTCCATCTCCACCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp TTAGCAACACTCTCACCAGCTCAAATCCACATTTTCCCAGAGGGTCCTCCCTCCTCCGCAGGGCCTGAGTaGCGAAAGAACTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LATLSPAQIHIFPEGPPSSAGPE*RKNSPP
Trigger: AGGAGGAGAGTTCTTTCGCCACTCAGGCCCTGCGGA...GGAGGGAGGACCCTCTGGGAAAATGTGGATTTGAGCTGGTGAGAGTGTTGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp TTTGAAGTTCTCAGGGTGCTCGGTGATGGCCATGTTGACAACATCCAGGGCATGACATCCAGGGCATGCTaGTGGTGCTTCTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: FEVLRVLGDGHVDNIQGMTSRAC*WCFWAE
Trigger: CTCTGCCCAGAAGCACCACCAGCATGCCCTGGATGT...CATGCCCTGGATGTTGTCAACATGGCCATCACCGAGCACCCTGAGAACTTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440051.1
CDS-3UTR CCA 90 bp ACTCCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCTCTAGGCCTCCCAGCTaGGAGAAGCTGTACAGGGTC +
Preference number: 4 (lower is better)
Translates to: TPSLRREPRNLIVFPLARSRPPS*EKLYRV
Trigger: GACCCTGTACAGCTTCTCCCAGCTGGGAGGCCTAGA...GCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp TACATGCCCAGTGAATATACATGCTGCTTCAGACAAGCCTGCTTCCCCTCCAAGTGGGCCAAGCTCTTGTaGCCCAGCCGACTCAGCATC +
Preference number: 4 (lower is better)
Translates to: YMPSEYTCCFRQACFPSKWAKLL*PSRLSI
Trigger: GATGCTGAGTCGGCTGGGCCACAAGAGCTTGGCCCA...CTTGGAGGGGAAGCAGGCTTGTCTGAAGCAGCATGTATATTCACTGGGCATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp TTAGCAACACTCTCACCAGCTCAAATCCACATTTTCCCAGAGGGTCCTCCCTCCACATCGCCAGGGAGATaGGGTGGGTGGAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: LATLSPAQIHIFPEGPPSTSPGR*GGWRWK
Trigger: CTTCCATCTCCACCCACCCCATCTCCCTGGCGATGT...GGAGGGAGGACCCTCTGGGAAAATGTGGATTTGAGCTGGTGAGAGTGTTGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp TTCAAGTCAGACTGTTTCCCAAGGCACCAACAAAGAAATCCAGGAAGGCCCTCTGGAGGCTGCTTGGGCTaGAGCACATCGCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: FKSDCFPRHQQRNPGRPSGGCLG*STSPGR
Trigger: TCTCCCTGGCGATGTGCTCCAGCCCAAGCAGCCTCC...AGAGGGCCTTCCTGGATTTCTTTGTTGGTGCCTTGGGAAACAGTCTGACTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp CAAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGACTGCCTACGGAGGCTGCTTaGGCTGGAGCACATCGCCAG +
Preference number: 4 (lower is better)
Translates to: QVWSPQNSPKALRVQVRLPTEAA*AGAHRQ
Trigger: CTGGCGATGTGCTCCAGCCCAAGCAGCCTCCGTAGG...CAGTCTGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp TTAGCAACACTCTCACCAGCTCAAATCCACATTTTCCCAGAGGGTCCTCCCTCCCTAGTGTGCCATGGATaGGGGGTCTCCAACAGCCCA +
Preference number: 4 (lower is better)
Translates to: LATLSPAQIHIFPEGPPSLVCHG*GVSNSP
Trigger: TGGGCTGTTGGAGACCCCCCATCCATGGCACACTAG...GGAGGGAGGACCCTCTGGGAAAATGTGGATTTGAGCTGGTGAGAGTGTTGCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp CCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCAGTGTCAGCAACTTGGCCTaGCCCTCTGCTGCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: PSLRREPRNLIVFPLARSVSNLA*PSAASN
Trigger: GTTGGAAGCAGCAGAGGGCCAGGCCAAGTTGCTGAC...ACTGCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp ACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCAGTTTCTTCACATTGTGACCACATCCCTCCCCAGGTaGGCCCAGGTCTTGGCTTCG +
Preference number: 4 (lower is better)
Translates to: TQKSHSLPTCPQFLHIVTTSLPR*AQVLAS
Trigger: CGAAGCCAAGACCTGGGCCCACCTGGGGAGGGATGT...GGTCACAATGTGAAGAAACTGCGGGCAAGTGGGAAGACTATGAGATTTCTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp GAAGTTCTCAGGGTGCTCGGTGATGGCCATGTTGACAACATCCAGGGCATGCTGAGGGGTGTACTGGTATaGACTTCTCAGCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: EVLRVLGDGHVDNIQGMLRGVLV*TSQQRW
Trigger: CCACCTCTGCTGAGAAGTCCATACCAGTACACCCCT...CAGCATGCCCTGGATGTTGTCAACATGGCCATCACCGAGCACCCTGAGAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR CCA 90 bp ATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCAACGAGCTGGGCACCATaGAGACTCTTTTTGAATGTT +
Preference number: 4 (lower is better)
Translates to: MYFPEAPHLMPLLPHPDPTSWAP*RLFLNV
Trigger: AACATTCAAAAAGAGTCTCCATGGTGCCCAGCTCGT...TGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409245.5
CDS-3UTR TCA 90 bp CTCTGGGCCTTTCAGCACCTGCTCCAGCTTCACCTTGGTGAACATCAGGTTGAACCCTCTCAAAACAGGTaGTCACTTCCTCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LWAFQHLLQLHLGEHQVEPSQNR*SLPPPS
Trigger: AGAGGGAGGAGGAAGTGATCACCTGTTTTGAGAGGG...TTCAACCTGATGTTCACCAAGGTGAAGCTGGAGCAGGTGCTGAAAGGCCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR TCA 90 bp AACACTCTCACCAGCTCAAATCCACATTTTCCCAGAGGGTCCTCCCTCCCATCCCTTCCAGGAAGTAGGTaGGCTCATAGTCAAGCGGGT +
Preference number: 4 (lower is better)
Translates to: NTLTSSNPHFPRGSSLPSLPGSR*AHSQAG
Trigger: ACCCGCTTGACTATGAGCTCACCTACTTCCTGGAAG...GGATGGGAGGGAGGACCCTCTGGGAAAATGTGGATTTGAGCTGGTGAGAGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR TCA 90 bp ATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCAATCACTTTGAAGTTCTaGGTTGCTTTGGTCTCCACA +
Preference number: 4 (lower is better)
Translates to: MYFPEAPHLMPLLPHPDPITLKF*VALVST
Trigger: TGTGGAGACCAAAGCAACTCAGAACTTCAAAGTGAT...TGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR TCA 90 bp GGGCTGCAGCTGCAGAGGCGTTCACTAAAGATGTATTTCCCTGAGGCCCCGCACACCTGGTACCAAAGGTaGAATTCTCCAAACGCAAAC +
Preference number: 4 (lower is better)
Translates to: GLQLQRRSLKMYFPEAPHTWYQR*NSPNAN
Trigger: GTTTGCGTTTGGAGAATTTCACCTTTGGTACCAGGT...GTGCGGGGCCTCAGGGAAATACATCTTTAGTGAACGCCTCTGCAGCTGCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp AACATCCAGGGCATGCTGGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGACCTGGTACCAAAGGTaGAATTCTCCAAACGCAAAC +
Preference number: 4 (lower is better)
Translates to: NIQGMLVVLLGREEQCQQTWYQR*NSPNAN
Trigger: GTTTGCGTTTGGAGAATTTCACCTTTGGTACCAGGT...CTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCTGGATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR TCA 90 bp GGGAGCAAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCACATCTGGGTTCACCGTaGGCGCCTCCTTGTACAGCT +
Preference number: 4 (lower is better)
Translates to: GSKSGHHKTLQRHLGFKSHLGSP*APPCTA
Trigger: AGCTGTACAAGGAGGCGCTCACGGTGAACCCAGATG...TGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTTGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp ACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCAGTTTCTTCACATTGTGACCGACCCAGGCTATGCATaGTGCGCACGCCATCTGGGT +
Preference number: 4 (lower is better)
Translates to: TQKSHSLPTCPQFLHIVTDPGYA*CARHLG
Trigger: ACCCAGATGGCGTGCGCATCATGCATAGCCTGGGTC...GGTCACAATGTGAAGAAACTGCGGGCAAGTGGGAAGACTATGAGATTTCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp GGGAGCAAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGCCCTGGGCAAGACCTaGGAGAGATCCAGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: GSKSGHHKTLQRHLGFKSALGKT*ERSRSL
Trigger: CAGACTTCTGGATCTCTCTCAGGTCTTGCCCAGGGC...TGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTTGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTAGGATTATACAGGGATaGATTCGATACAGGGATGAT +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRRIIQG*IRYRDD
Trigger: ATCATCCCTGTATCGAATTCATCCCTGTATAATCCT...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409245.5
CDS-3UTR GCA 90 bp CCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCAGTTTCTCCTTCAAACACTaGTCCAGGAGGGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: PSLRREPRNLIVFPLARSFSFKH*SRRASA
Trigger: GGCTGAGGCCCTCCTGGAGCAGTGTTTGAAGGAGAA...ACTGCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000394850.6
CDS-3UTR GCA 90 bp ACTCCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCTTCTCCTTCAAACACTaGTCCAGGAGGGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: TPSLRREPRNLIVFPLARFSFKH*SRRASA
Trigger: GGCTGAGGCCCTCCTGGAGCAGTGTTTGAAGGAGAA...GCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000394850.6
CDS-3UTR GCA 90 bp ACTCCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCATCAATCCCGGCCCGTaGGTACATGCTGATGGCATC +
Preference number: 4 (lower is better)
Translates to: TPSLRREPRNLIVFPLARINPGP*VHADGI
Trigger: GATGCCATCAGCATGTACGCACGGGCCGGGATTGAT...GCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp TGCATCATGGGCATCAGGCAAAGTCAGGTGCATGCCACTCTGCTTCTTCATGGTATCAATCCCGGCCCGTaGGTACATGCTGATGGCATC +
Preference number: 4 (lower is better)
Translates to: CIMGIRQSQVHATLLLHGINPGP*VHADGI
Trigger: GATGCCATCAGCATGTACGCACGGGCCGGGATTGAT...ACCATGAAGAAGCAGAGTGGCATGCACCTGACTTTGCCTGATGCCCATGATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACTCAGATGCCTCGACGTaGTGTTATTTGTGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDSDAST*CYLWSS
Trigger: AGAAGACCACAAATAACAGCACGTCGAGGCATCTGA...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR GCA 90 bp GCAGTTTCTTCACATTGTGACCGCCCTGGGCAAGACCTGAGAGAGATCCAGAAGGAGGTCATAGATGGCTaGGGCATTCTGCAAGCTCAC +
Preference number: 4 (lower is better)
Translates to: AVSSHCDRPGQDLREIQKEVIDG*GILQAH
Trigger: GTGAGCTTGCAGAATGCCGCAGCCATCTATGACCTC...CTTCTGGATCTCTCTCAGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp AGCCCTCTCCAGCGTCTGCAGTGCCTTCCGGTGCAATTCATCTTGCTTGGACTTACCATCATGGCAAAGTaGTCTGCTTCCTCTAGCCAG +
Preference number: 4 (lower is better)
Translates to: SPLQRLQCLPVQFILLGLTIMAK*SASSSQ
Trigger: CTGGCTAGAGGAAGCAGAGCACTTTGCCATGATGGT...AAGTCCAAGCAAGATGAATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp GGGAGCAAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGGCCCTCACCGAAGCTaGCATCCTTTTCTAGGCCTC +
Preference number: 4 (lower is better)
Translates to: GSKSGHHKTLQRHLGFKSGPHRS*HPFLGL
Trigger: GAGGCCTAGAAAAGGATGGCAGCTTCGGTGAGGGCC...TGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTTGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp GGGCAAGCAGGGGCAATGCAGGAATCATCTACTAACTCCAAGTCTGAGAAGGGAAACAGCTCAGCAGCCTaGAGCCAGATCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GQAGAMQESSTNSKSEKGNSSAA*SQICSS
Trigger: GCTGGAACAGATCTGGCTGCAGGCTGCTGAGCTGTT...TCCCTTCTCAGACTTGGAGTTAGTAGATGATTCCTGCATTGCCCCTGCTTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp CCAGCTCTTGGGGAGCAAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGATCAGACCCAGGCTATaGATGATGCGCACGCCATCT +
Preference number: 4 (lower is better)
Translates to: PALGEQVWSPQNSPKALRIRPRL*MMRTPS
Trigger: AGATGGCGTGCGCATCATGCATAGCCTGGGTCTGAT...CCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTTGCTCCCCAAGAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp ATCAGCAATGCCCGAGGGGATCTCTGTTCAGACGTGAGTCCTGCCTTGGCCTCTGGCAAGCAGGGGCAATaGAGGAATCATCTACTAACT +
Preference number: 4 (lower is better)
Translates to: ISNARGDLCSDVSPALASGKQGQ*RNHLLT
Trigger: AGTTAGTAGATGATTCCTGCATTGCCCCTGCTTGCC...AGAGGCCAAGGCAGGACTCACGTCTGAACAGAGATCCCCTCGGGCATTGCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR GCA 90 bp TACATGCCCAGTGAATATACATGCTGCTTCAGACAAGCCTGCTTCCCCTCCAAGAAAGCCTACGGAGGCTaGTTGGGCTGGAGCACATCG +
Preference number: 4 (lower is better)
Translates to: YMPSEYTCCFRQACFPSKKAYGG*LGWSTS
Trigger: CGATGTGCTCCAGCCCAAGCAGCCTCCGTAGGCTTT...CTTGGAGGGGAAGCAGGCTTGTCTGAAGCAGCATGTATATTCACTGGGCATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTGCTTAGATAATTTTTaGCTTCGCTCATCTTCGGCT +
Preference number: 4 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRCLDNF*LRSSSA
Trigger: AGCCGAAGATGAGCGAAGCCAAAAATTATCTAAGCA...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp CCAGCTCTTGGGGAGCAAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGTGCCCAGGATCAGCATaGCCTCACACATGTACTGTG +
Preference number: 4 (lower is better)
Translates to: PALGEQVWSPQNSPKALRCPGSA*PHTCTV
Trigger: CACAGTACATGTGTGAGGCCATGCTGATCCTGGGCA...CCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTTGCTCCCCAAGAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp CTGTGGGTGGTGAGATGTACTGGGGACAGTCCTAGAAACTGCCTACCTCCATGTCCTCGATGTTGTCCTTaGGGCAGTAGAGGTTGTCTC +
Preference number: 4 (lower is better)
Translates to: LWVVRCTGDSPRNCLPPCPRCCP*GSRGCL
Trigger: GAGACAACCTCTACTGCCCCAAGGACAACATCGAGG...ACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCTCACCACCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp AGGCCTTTGAAGTTCTCAGGGTGCTCGGTGATGGCCATGTTGACAACATCCAGGTCAGGAGGTCATAGATaGCTGCGGCATTCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: RPLKFSGCSVMAMLTTSRSGGHR*LRHSAS
Trigger: GCTTGCAGAATGCCGCAGCCATCTATGACCTCCTGA...CCTGGATGTTGTCAACATGGCCATCACCGAGCACCCTGAGAACTTCAAAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440051.1
CDS-3UTR CCA 90 bp CTGTGGGTGGTGAGATGTACTGGGGACAGTCCTAGAAACTGCCTACCTCCATGTGCAATTCATCTTGCTTaGACTTCAGGGTGGCGTCGG +
Preference number: 4 (lower is better)
Translates to: LWVVRCTGDSPRNCLPPCAIHLA*TSGWRR
Trigger: CCGACGCCACCCTGAAGTCCAAGCAAGATGAATTGC...ACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCTCACCACCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp ACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCAGTTTCTTCACATTGTGACCAGCAGGTGGAGGGCGTaGGCATCATCCTTGCGTACC +
Preference number: 4 (lower is better)
Translates to: TQKSHSLPTCPQFLHIVTSRWRA*ASSLRT
Trigger: GGTACGCAAGGATGATGCCCACGCCCTCCACCTGCT...GGTCACAATGTGAAGAAACTGCGGGCAAGTGGGAAGACTATGAGATTTCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp GCAGTTTCTTCACATTGTGACCGCCCTGGGCAAGACCTGAGAGAGATCCAGAAGCCAGAGTCTGCATCATaGGCATCAGGCAAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: AVSSHCDRPGQDLREIQKPESAS*ASGKVR
Trigger: CCTGACTTTGCCTGATGCCCATGATGCAGACTCTGG...CTTCTGGATCTCTCTCAGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp TTCAAGTCAGACTGTTTCCCAAGGCACCAACAAAGAAATCCAGGAAGGCCCTCTTGGGCCAAGCTCTTGTaGCCCAGCCGACTCAGCATC +
Preference number: 4 (lower is better)
Translates to: FKSDCFPRHQQRNPGRPSWAKLL*PSRLSI
Trigger: GATGCTGAGTCGGCTGGGCCACAAGAGCTTGGCCCA...AGAGGGCCTTCCTGGATTTCTTTGTTGGTGCCTTGGGAAACAGTCTGACTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp GGGAGCAAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAACATCGCCAGGGAGATaGGGTGGGTGGAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: GSKSGHHKTLQRHLGFKSTSPGR*GGWRWK
Trigger: CTTCCATCTCCACCCACCCCATCTCCCTGGCGATGT...TGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTTGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp TGGGTGGTGAGATGTACTGGGGACAGTCCTAGAAACTGCCTACCTCCATGTTGGTCCTTCCGAGGAAGGTaGAGCTATGATGAACCAGGG +
Preference number: 4 (lower is better)
Translates to: WVVRCTGDSPRNCLPPCWSFRGR*SYDEPG
Trigger: CCCTGGTTCATCATAGCTCCACCTTCCTCGGAAGGA...CCAACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCTCACCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp GGGAGCAAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCACTAGTGTGCCATGGATaGGGGGTCTCCAACAGCCCA +
Preference number: 4 (lower is better)
Translates to: GSKSGHHKTLQRHLGFKSLVCHG*GVSNSP
Trigger: TGGGCTGTTGGAGACCCCCCATCCATGGCACACTAG...TGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTTGCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp TACATGCCCAGTGAATATACATGCTGCTTCAGACAAGCCTGCTTCCCCTCCAAGGTCAGCAACTTGGCCTaGCCCTCTGCTGCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: YMPSEYTCCFRQACFPSKVSNLA*PSAASN
Trigger: GTTGGAAGCAGCAGAGGGCCAGGCCAAGTTGCTGAC...CTTGGAGGGGAAGCAGGCTTGTCTGAAGCAGCATGTATATTCACTGGGCATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp ATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCATTATTAGGGGTGTACTaGTATGGACTTCTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: MYFPEAPHLMPLLPHPDPLLGVY*YGLLSR
Trigger: TCTGCTGAGAAGTCCATACCAGTACACCCCTAATAA...TGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp AGGCCTTTGAAGTTCTCAGGGTGCTCGGTGATGGCCATGTTGACAACATCCAGGGCAATTCATCTTGCTTaGACTTCAGGGTGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: RPLKFSGCSVMAMLTTSRAIHLA*TSGWPA
Trigger: CGCTGGCCACCCTGAAGTCCAAGCAAGATGAATTGC...CCTGGATGTTGTCAACATGGCCATCACCGAGCACCCTGAGAACTTCAAAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440051.1
CDS-3UTR TCA 90 bp GGGCAAGCAGGGGCAATGCAGGAATCATCTACTAACTCCAAGTCTGAGAAGGGACCCTCTCAAAACAGGTaGTCACTTCCTCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: GQAGAMQESSTNSKSEKGPSQNR*SLPPPS
Trigger: AGAGGGAGGAGGAAGTGATCACCTGTTTTGAGAGGG...TCCCTTCTCAGACTTGGAGTTAGTAGATGATTCCTGCATTGCCCCTGCTTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp GGGCTGCAGCTGCAGAGGCGTTCACTAAAGATGTATTTCCCTGAGGCCCCGCACATCACTTTGAAGTTCTaGGTTGCTTTGGTCTCCACA +
Preference number: 4 (lower is better)
Translates to: GLQLQRRSLKMYFPEAPHITLKF*VALVST
Trigger: TGTGGAGACCAAAGCAACTCAGAACTTCAAAGTGAT...GTGCGGGGCCTCAGGGAAATACATCTTTAGTGAACGCCTCTGCAGCTGCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp AAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGACTGTGGCACTCCGAGAGCATaGCGTACTGTCCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: KSGHHKTLQRHLGFKSDCGTPRA*RTVPFC
Trigger: GCAGAAGGGGACAGTACGTCATGCTCTCGGAGTGCC...ACAGTCTGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp CCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGACTGTTTCCCAAGGCAGGACACAGCGTAGGCTaGCTTCCCACAAGCCACCAT +
Preference number: 4 (lower is better)
Translates to: PQNSPKALRVQVRLFPKAGHSVG*LPTSHH
Trigger: ATGGTGGCTTGTGGGAAGTCAGCCTACGCTGTGTCC...TGCCTTGGGAAACAGTCTGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp GCAGTTTCTTCACATTGTGACCGCCCTGGGCAAGACCTGAGAGAGATCCAGAAGCCGCATATAGAGTACTaGGTGAGAAGTGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: AVSSHCDRPGQDLREIQKPHIEY*VRSGEE
Trigger: CTCTTCCCCACTTCTCACTCAGTACTCTATATGCGG...CTTCTGGATCTCTCTCAGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp GTGCAATTCATCTTGCTTGGACTTCAGGGTGGCGTCGGTGGCCTGCAGGCTATAGCAGTAGAGGCACTTTaGAGTTCTGAGTTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: VQFILLGLQGGVGGLQAIAVEAL*SSELLW
Trigger: CCAAAGCAACTCAGAACTTCAAAGTGCCTCTACTGC...TATAGCCTGCAGGCCACCGACGCCACCCTGAAGTCCAAGCAAGATGAATTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441914.5
CDS-3UTR GCA 90 bp GGGCAAGCAGGGGCAATGCAGGAATCATCTACTAACTCCAAGTCTGAGAAGGGACCACGTAATGCAGTTTaGCCAGGATCAGCATGGCCT +
Preference number: 4 (lower is better)
Translates to: GQAGAMQESSTNSKSEKGPRNAV*PGSAWP
Trigger: AGGCCATGCTGATCCTGGGCAAACTGCATTACGTGG...TCCCTTCTCAGACTTGGAGTTAGTAGATGATTCCTGCATTGCCCCTGCTTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp TGGGCAAGACCTGAGAGAGATCCAGAAGTCTGTACTGTGCTGAGAGTGGGGAGTCACCACATCTCGAGTTaGCATGGATTCGCTGATGAG +
Preference number: 4 (lower is better)
Translates to: WARPERDPEVCTVLRVGSHHISS*HGFADE
Trigger: CTCATCAGCGAATCCATGGCAACTCGAGATGTGGTG...ACTCCCCACTCTCAGCACAGTACAGACTTCTGGATCTCTCTCAGGTCTTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp TGGATGCAGAAACCTGCTTCCTTGAGGTGCTGCTGCTCCATGAACAGCTCAGCACACCACATCTCGAGTTaGCATGGATTCGCTGATGAG +
Preference number: 4 (lower is better)
Translates to: WMQKPASLRCCCSMNSSAHHISS*HGFADE
Trigger: CTCATCAGCGAATCCATGGCAACTCGAGATGTGGTG...TGCTGAGCTGTTCATGGAGCAGCAGCACCTCAAGGAAGCAGGTTTCTGCATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp GCTCAAGGCTGGTGTGGGAGCTACATGCCCAGTGAATATACATGCTGCTTCAGAGAGGTCATAGATGGCTaGGGCATTCTGCAAGCTCAC +
Preference number: 4 (lower is better)
Translates to: AQGWCGSYMPSEYTCCFREVIDG*GILQAH
Trigger: GTGAGCTTGCAGAATGCCGCAGCCATCTATGACCTC...TCTGAAGCAGCATGTATATTCACTGGGCATGTAGCTCCCACACCAGCCTTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR GCA 90 bp GCAGTTTCTTCACATTGTGACCGCCCTGGGCAAGACCTGAGAGAGATCCAGAAGTGCAGTGCCTTCCGGTaGAATTCATCTTGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: AVSSHCDRPGQDLREIQKCSAFR*NSSCLD
Trigger: GTCCAAGCAAGATGAATTGCACCGGAAGGCACTGCA...CTTCTGGATCTCTCTCAGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp CAAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGACTGAGGGCATGCTGGTGGTaGTTCTGGGCAGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: QVWSPQNSPKALRVQVRLRACWW*FWAEKS
Trigger: GCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCT...CAGTCTGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp AACACTCTCACCAGCTCAAATCCACATTTTCCCAGAGGGTCCTCCCTCCCATCCTTGAAGTTCTCAGGGTaGTCGGTGATGGCCATGTTG +
Preference number: 4 (lower is better)
Translates to: NTLTSSNPHFPRGSSLPSLKFSG*SVMAML
Trigger: CAACATGGCCATCACCGAGCACCCTGAGAACTTCAA...GGATGGGAGGGAGGACCCTCTGGGAAAATGTGGATTTGAGCTGGTGAGAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR GCA 90 bp ACTCCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCAAGCTGTACAGGGTCTaGCACAGCCTCAGCACTTGT +
Preference number: 4 (lower is better)
Translates to: TPSLRREPRNLIVFPLARKLYRV*HSLSTC
Trigger: ACAAGTGCTGAGGCTGTGGCAGACCCTGTACAGCTT...GCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp GCCTTTCAGATGCCTCGACGTGCTGTTATTTGTGGTCTTCTCCAATTCCTGCAGAGGTGCATGCCACTCTaGTTCTTCATGGTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: AFQMPRRAVICGLLQFLQRCMPL*FFMVRP
Trigger: GGGCCTCACCATGAAGAAGCAGAGTGGCATGCACCT...CTGCAGGAATTGGAGAAGACCACAAATAACAGCACGTCGAGGCATCTGAAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR GCA 90 bp AACACTCTCACCAGCTCAAATCCACATTTTCCCAGAGGGTCCTCCCTCCCATCCGCAAAGTCAGGTGCATaGCACTCTGCTTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: NTLTSSNPHFPRGSSLPSAKSGA*HSASSW
Trigger: CCATGAAGAAGCAGAGTGGCATGCACCTGACTTTGC...GGATGGGAGGGAGGACCCTCTGGGAAAATGTGGATTTGAGCTGGTGAGAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR GCA 90 bp CAAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGACTGCCGGGAGCCAGAGTCTaGATCATGGGCATCAGGCAA +
Preference number: 4 (lower is better)
Translates to: QVWSPQNSPKALRVQVRLPGARV*IMGIRQ
Trigger: TTGCCTGATGCCCATGATGCAGACTCTGGCTCCCGG...CAGTCTGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp AGACCTGAGAGAGATCCAGAAGTCTGTACTGTGCTGAGAGTGGGGAGTGAGAACTCCTTGAGGTGCTGCTaGTCCATGAACAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: RPERDPEVCTVLRVGSENSLRCC*SMNSSA
Trigger: TGCTGAGCTGTTCATGGAGCAGCAGCACCTCAAGGA...GTTCTCACTCCCCACTCTCAGCACAGTACAGACTTCTGGATCTCTCTCAGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp TTAGCAACACTCTCACCAGCTCAAATCCACATTTTCCCAGAGGGTCCTCCCTCCTCCTTGAGGTGCTGCTaGTCCATGAACAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: LATLSPAQIHIFPEGPPSSLRCC*SMNSSA
Trigger: TGCTGAGCTGTTCATGGAGCAGCAGCACCTCAAGGA...GGAGGGAGGACCCTCTGGGAAAATGTGGATTTGAGCTGGTGAGAGTGTTGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR GCA 90 bp TGCATCATGGGCATCAGGCAAAGTCAGGTGCATGCCACTCTGCTTCTTCATGGTGCTTCCTTGAGGTGCTaGTGCTCCATGAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: CIMGIRQSQVHATLLLHGASLRC*CSMNSS
Trigger: TGAGCTGTTCATGGAGCAGCAGCACCTCAAGGAAGC...ACCATGAAGAAGCAGAGTGGCATGCACCTGACTTTGCCTGATGCCCATGATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp ACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCAGTTTCTTCACATTGTGACCCAAGAGAACGAGGGCTaGAGCTGCAGAGGCGTTCAC +
Preference number: 4 (lower is better)
Translates to: TQKSHSLPTCPQFLHIVTQENEG*SCRGVH
Trigger: GTGAACGCCTCTGCAGCTGCAGCCCTCGTTCTCTTG...GGTCACAATGTGAAGAAACTGCGGGCAAGTGGGAAGACTATGAGATTTCTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp TGGGCAAGACCTGAGAGAGATCCAGAAGTCTGTACTGTGCTGAGAGTGGGGAGTGACAGTCCTAGAAACTaGCTACCTCCATGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: WARPERDPEVCTVLRVGSDSPRN*LPPCWW
Trigger: CCACCAACATGGAGGTAGGCAGTTTCTAGGACTGTC...ACTCCCCACTCTCAGCACAGTACAGACTTCTGGATCTCTCTCAGGTCTTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp CTGCTCCAGCTTCACCTTGGTGAACATCAGGTTGAAGTTCTCAGGGTGCTCGGTGACAGTCCTAGAAACTaGCTACCTCCATGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LLQLHLGEHQVEVLRVLGDSPRN*LPPCWW
Trigger: CCACCAACATGGAGGTAGGCAGTTTCTAGGACTGTC...ACCGAGCACCCTGAGAACTTCAACCTGATGTTCACCAAGGTGAAGCTGGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR GCA 90 bp GGGCAAGCAGGGGCAATGCAGGAATCATCTACTAACTCCAAGTCTGAGAAGGGATGCTTCAGACAAGCCTaGTTCCCCTCCAAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: GQAGAMQESSTNSKSEKGCFRQA*FPSKGF
Trigger: GAAACCCTTGGAGGGGAAGCAGGCTTGTCTGAAGCA...TCCCTTCTCAGACTTGGAGTTAGTAGATGATTCCTGCATTGCCCCTGCTTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp GGGTGGGTGGAGATGGAAGTGTTAGGGCCGGTGCTCAGTACCCCTGGTCAGACCTGGAGTCTTTTATTTTaGCATGGTTCTCCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: GWVEMEVLGPVLSTPGQTWSLLF*HGSPSN
Trigger: GTTTGAAGGAGAACCATGCCAAAATAAAAGACTCCA...GGTCTGACCAGGGGTACTGAGCACCGGCCCTAACACTTCCATCTCCACCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000394850.6
CDS-3UTR CCA 90 bp ATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCATGCTTAGATAATTTTTaGCTTCGCTCATCTTCGGCT +
Preference number: 4 (lower is better)
Translates to: MYFPEAPHLMPLLPHPDPCLDNF*LRSSSA
Trigger: AGCCGAAGATGAGCGAAGCCAAAAATTATCTAAGCA...TGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp GCTCCATGGCACTGGAGATCTGTCGGACGAGGGCCAGCTGCAGCGAGACATAGATGCTTAGATAATTTTTaGCTTCGCTCATCTTCGGCT +
Preference number: 4 (lower is better)
Translates to: APWHWRSVGRGPAAARHRCLDNF*LRSSSA
Trigger: AGCCGAAGATGAGCGAAGCCAAAAATTATCTAAGCA...TCTATGTCTCGCTGCAGCTGGCCCTCGTCCGACAGATCTCCAGTGCCATGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp ACTCCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCTGCCCAGGATCAGCATaGCCTCACACATGTACTGTG +
Preference number: 4 (lower is better)
Translates to: TPSLRREPRNLIVFPLARCPGSA*PHTCTV
Trigger: CACAGTACATGTGTGAGGCCATGCTGATCCTGGGCA...GCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp GCTCAAGGCTGGTGTGGGAGCTACATGCCCAGTGAATATACATGCTGCTTCAGAGGGGCTTGTTCTCCATaGACATGTCATCAATCCCGG +
Preference number: 4 (lower is better)
Translates to: AQGWCGSYMPSEYTCCFRGACSP*TCHQSR
Trigger: CCGGGATTGATGACATGTCCATGGAGAACAAGCCCC...TCTGAAGCAGCATGTATATTCACTGGGCATGTAGCTCCCACACCAGCCTTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp GGTTGCCCTTCACCTCAGCCAGCCGGCCCCGCATATAGAGTACTGAGTGAGAAGACGTGCTGTTATTTGTaGTCTTCTCCAATTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GCPSPQPAGPAYRVLSEKTCCYL*SSPIPA
Trigger: TGCAGGAATTGGAGAAGACCACAAATAACAGCACGT...CTTCTCACTCAGTACTCTATATGCGGGGCCGGCTGGCTGAGGTGAAGGGCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CCA 90 bp CTGGTCTCAGAGGGCAAGCAGGGGCAATGCAGGAATCATCTACTAACTCCAAGTCCTCGATGTTGTCCTTaGGGCAGTAGAGGTTGTCTC +
Preference number: 4 (lower is better)
Translates to: LVSEGKQGQCRNHLLTPSPRCCP*GSRGCL
Trigger: GAGACAACCTCTACTGCCCCAAGGACAACATCGAGG...ACTTGGAGTTAGTAGATGATTCCTGCATTGCCCCTGCTTGCCCTCTGAGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp CCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGACTGTTTCCCAAGGCATGCTGGTGGTGCTTCTaGGCAGAGAAGAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: PQNSPKALRVQVRLFPKACWWCF*AEKSSA
Trigger: GGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCA...TGCCTTGGGAAACAGTCTGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp TTCAAGTCAGACTGTTTCCCAAGGCACCAACAAAGAAATCCAGGAAGGCCCTCTACATCGCCAGGGAGATaGGGTGGGTGGAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: FKSDCFPRHQQRNPGRPSTSPGR*GGWRWK
Trigger: CTTCCATCTCCACCCACCCCATCTCCCTGGCGATGT...AGAGGGCCTTCCTGGATTTCTTTGTTGGTGCCTTGGGAAACAGTCTGACTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp ACTCCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCTCCTTCCGAGGAAGGTaGAGCTATGATGAACCAGGG +
Preference number: 4 (lower is better)
Translates to: TPSLRREPRNLIVFPLARSFRGR*SYDEPG
Trigger: CCCTGGTTCATCATAGCTCCACCTTCCTCGGAAGGA...GCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp CTGGTCTCAGAGGGCAAGCAGGGGCAATGCAGGAATCATCTACTAACTCCAAGTAGGGGTGTACTGGTATaGACTTCTCAGCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LVSEGKQGQCRNHLLTPSRGVLV*TSQQRW
Trigger: CCACCTCTGCTGAGAAGTCCATACCAGTACACCCCT...ACTTGGAGTTAGTAGATGATTCCTGCATTGCCCCTGCTTGCCCTCTGAGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp CTGGTCTCAGAGGGCAAGCAGGGGCAATGCAGGAATCATCTACTAACTCCAAGTCTAAAGTCTCCCAGCTaGGAGAAGCTGTACAGGGTC +
Preference number: 4 (lower is better)
Translates to: LVSEGKQGQCRNHLLTPSLKSPS*EKLYRV
Trigger: GACCCTGTACAGCTTCTCCCAGCTGGGAGACTTTAG...ACTTGGAGTTAGTAGATGATTCCTGCATTGCCCCTGCTTGCCCTCTGAGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394850.6
CDS-3UTR TCA 90 bp ACTCCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCTGGCCGCCATCACTTTaGAGTTCTGAGTTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: TPSLRREPRNLIVFPLARWPPSL*SSELLW
Trigger: CCAAAGCAACTCAGAACTTCAAAGTGATGGCGGCCA...GCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp CAAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGACTGCCCTTCTGCCCAACGTaGTGCTCAGGAGGTCATAGA +
Preference number: 4 (lower is better)
Translates to: QVWSPQNSPKALRVQVRLPFCPT*CSGGHR
Trigger: TCTATGACCTCCTGAGCATCACGTTGGGCAGAAGGG...CAGTCTGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp ACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCAGTTTCTTCACATTGTGACCATAGGCCTGGGGGACTaGCTCCTTGGAGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: TQKSHSLPTCPQFLHIVTIGLGD*LLGEEF
Trigger: GAACTCTTCTCCAAGGAGTCAGTCCCCCAGGCCTAT...GGTCACAATGTGAAGAAACTGCGGGCAAGTGGGAAGACTATGAGATTTCTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp CCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGACTGTTTCCCAAGGCACGGGAAATGCAGTGCTaGGCTAGTGTGCCATGGATG +
Preference number: 4 (lower is better)
Translates to: PQNSPKALRVQVRLFPKAREMQC*ASVPWM
Trigger: CATCCATGGCACACTAGCTCAGCACTGCATTTCCCG...TGCCTTGGGAAACAGTCTGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp TGGGCAAGACCTGAGAGAGATCCAGAAGTCTGTACTGTGCTGAGAGTGGGGAGTCCACTTTGGGCACCCTaGGATAAACCAACAGCATTT +
Preference number: 4 (lower is better)
Translates to: WARPERDPEVCTVLRVGSPLWAP*DKPTAF
Trigger: AAATGCTGTTGGTTTATCTCAGGGTGCCCAAAGTGG...ACTCCCCACTCTCAGCACAGTACAGACTTCTGGATCTCTCTCAGGTCTTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR TCA 90 bp CCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGACTGTTTCCCAAGGCAATCTCTGTTCAGACGTaGGTCCTGCCTTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: PQNSPKALRVQVRLFPKAISVQT*VLPWPL
Trigger: GAGAGGCCAAGGCAGGACTCACGTCTGAACAGAGAT...TGCCTTGGGAAACAGTCTGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR TCA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTATGGAAGATGGTATTTaGACTGGGTCGCATAGTCTT +
Preference number: 4 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPMEDGI*TGSHSL
Trigger: AAGACTATGCGACCCAGTTCAAATACCATCTTCCAT...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409245.5
CDS-3UTR TCA 90 bp CTGCTCCAGCTTCACCTTGGTGAACATCAGGTTGAAGTTCTCAGGGTGCTCGGTGGCACTTTGAAGTTCTaGGTTGCTTTGGTCTCCACA +
Preference number: 4 (lower is better)
Translates to: LLQLHLGEHQVEVLRVLGGTLKF*VALVST
Trigger: TGTGGAGACCAAAGCAACTCAGAACTTCAAAGTGCC...ACCGAGCACCCTGAGAACTTCAACCTGATGTTCACCAAGGTGAAGCTGGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441914.5
CDS-3UTR GCA 90 bp CAAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGACTGATCAATCCCGGCCCGTaGGTACATGCTGATGGCATC +
Preference number: 4 (lower is better)
Translates to: QVWSPQNSPKALRVQVRLINPGP*VHADGI
Trigger: GATGCCATCAGCATGTACGCACGGGCCGGGATTGAT...CAGTCTGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp CTGGTCTCAGAGGGCAAGCAGGGGCAATGCAGGAATCATCTACTAACTCCAAGTCACCACATCTCGAGTTaGCATGGATTCGCTGATGAG +
Preference number: 4 (lower is better)
Translates to: LVSEGKQGQCRNHLLTPSHHISS*HGFADE
Trigger: CTCATCAGCGAATCCATGGCAACTCGAGATGTGGTG...ACTTGGAGTTAGTAGATGATTCCTGCATTGCCCCTGCTTGCCCTCTGAGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp CAAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGACTGCTCCAGCGTCTGCAGTaGCTTCCGGTGCAATTCATC +
Preference number: 4 (lower is better)
Translates to: QVWSPQNSPKALRVQVRLLQRLQ*LPVQFI
Trigger: GATGAATTGCACCGGAAGGCACTGCAGACGCTGGAG...CAGTCTGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp AGACCTGAGAGAGATCCAGAAGTCTGTACTGTGCTGAGAGTGGGGAGTGAGAACTCAGGCAAAGTCAGGTaGATGCCACTCTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: RPERDPEVCTVLRVGSENSGKVR*MPLCFF
Trigger: GAAGAAGCAGAGTGGCATGCACCTGACTTTGCCTGA...GTTCTCACTCCCCACTCTCAGCACAGTACAGACTTCTGGATCTCTCTCAGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp AAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGACTGTCCGGGAGCCAGAGTCTaGATCATGGGCATCAGGCAA +
Preference number: 4 (lower is better)
Translates to: KSGHHKTLQRHLGFKSDCPGARV*IMGIRQ
Trigger: TTGCCTGATGCCCATGATGCAGACTCTGGCTCCCGG...ACAGTCTGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp CCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGACTGTTTCCCAAGGCAAACAGCTCAGCAGCCTaGAGCCAGATCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PQNSPKALRVQVRLFPKANSSAA*SQICSS
Trigger: GCTGGAACAGATCTGGCTGCAGGCTGCTGAGCTGTT...TGCCTTGGGAAACAGTCTGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp AACACTCTCACCAGCTCAAATCCACATTTTCCCAGAGGGTCCTCCCTCCCATCCGGTGTGGGAGCTACATaGCCAGTGAATATACATGCT +
Preference number: 4 (lower is better)
Translates to: NTLTSSNPHFPRGSSLPSGVGAT*PVNIHA
Trigger: AGCATGTATATTCACTGGGCATGTAGCTCCCACACC...GGATGGGAGGGAGGACCCTCTGGGAAAATGTGGATTTGAGCTGGTGAGAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTACGTGCTGTTATTTGTaGTCTTCTCCAATTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPTCCYL*SSPIPA
Trigger: TGCAGGAATTGGAGAAGACCACAAATAACAGCACGT...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CCA 90 bp AGACCTGAGAGAGATCCAGAAGTCTGTACTGTGCTGAGAGTGGGGAGTGAGAACAGTTCTGAGTTGCTTTaGTCTCCACAGTCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: RPERDPEVCTVLRVGSENSSELL*SPQSAA
Trigger: TGCTGCGGACTGTGGAGACCAAAGCAACTCAGAACT...GTTCTCACTCCCCACTCTCAGCACAGTACAGACTTCTGGATCTCTCTCAGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp ACTCCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCAGTTCTGAGTTGCTTTaGTCTCCACAGTCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: TPSLRREPRNLIVFPLARSSELL*SPQSAA
Trigger: TGCTGCGGACTGTGGAGACCAAAGCAACTCAGAACT...GCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp AAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGACTGTTCCGCAGGGCCTGAGTaGCGAAAGAACTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KSGHHKTLQRHLGFKSDCSAGPE*RKNSPP
Trigger: AGGAGGAGAGTTCTTTCGCCACTCAGGCCCTGCGGA...ACAGTCTGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp TACATGCCCAGTGAATATACATGCTGCTTCAGACAAGCCTGCTTCCCCTCCAAGTCAGGAGGTCATAGATaGCTGCGGCATTCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: YMPSEYTCCFRQACFPSKSGGHR*LRHSAS
Trigger: GCTTGCAGAATGCCGCAGCCATCTATGACCTCCTGA...CTTGGAGGGGAAGCAGGCTTGTCTGAAGCAGCATGTATATTCACTGGGCATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp CCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCAGTCTTGGGGAGCAAGTCTaGTCACCACAAAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: PSLRREPRNLIVFPLARSLGEQV*SPQNSP
Trigger: TGGAGAGTTTTGTGGTGACCAGACTTGCTCCCCAAG...ACTGCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp CCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGACTGTTTCCCAAGGCACCCTCTCAAAACAGGTaGTCACTTCCTCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: PQNSPKALRVQVRLFPKAPSQNR*SLPPPS
Trigger: AGAGGGAGGAGGAAGTGATCACCTGTTTTGAGAGGG...TGCCTTGGGAAACAGTCTGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp AAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGACTGTAGAGCTCTCTGGGGATaGTGGAGAAGGGCAGTACAG +
Preference number: 4 (lower is better)
Translates to: KSGHHKTLQRHLGFKSDCRALWG*WRRAVQ
Trigger: CTGTACTGCCCTTCTCCATCATCCCCAGAGAGCTCT...ACAGTCTGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp ACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCAGTTTCTTCACATTGTGACCAGTTTCTTCACATTGTaGCCGCCCTGGGCAAGACCT +
Preference number: 4 (lower is better)
Translates to: TQKSHSLPTCPQFLHIVTSFFTL*PPWARP
Trigger: AGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACT...GGTCACAATGTGAAGAAACTGCGGGCAAGTGGGAAGACTATGAGATTTCTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACAATTCGATACAGGGATaGTGTATTCGTTTCCCTATT +
Preference number: 4 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDNSIQG*CIRFPI
Trigger: AATAGGGAAACGAATACATCATCCCTGTATCGAATT...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409245.5
CDS-3UTR GCA 90 bp AACACTCTCACCAGCTCAAATCCACATTTTCCCAGAGGGTCCTCCCTCCCATCCTCAGATGCCTCGACGTaGTGTTATTTGTGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: NTLTSSNPHFPRGSSLPSSDAST*CYLWSS
Trigger: AGAAGACCACAAATAACAGCACGTCGAGGCATCTGA...GGATGGGAGGGAGGACCCTCTGGGAAAATGTGGATTTGAGCTGGTGAGAGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR GCA 90 bp ACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCAGTTTCTTCACATTGTGACCATCAGACCCAGGCTATaGATGATGCGCACGCCATCT +
Preference number: 4 (lower is better)
Translates to: TQKSHSLPTCPQFLHIVTIRPRL*MMRTPS
Trigger: AGATGGCGTGCGCATCATGCATAGCCTGGGTCTGAT...GGTCACAATGTGAAGAAACTGCGGGCAAGTGGGAAGACTATGAGATTTCTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp CCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCAGTGGCAAGCAGGGGCAATaGAGGAATCATCTACTAACT +
Preference number: 4 (lower is better)
Translates to: PSLRREPRNLIVFPLARSGKQGQ*RNHLLT
Trigger: AGTTAGTAGATGATTCCTGCATTGCCCCTGCTTGCC...ACTGCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp GGGTGCTCGGTGATGGCCATGTTGACAACATCCAGGGCATGCTGGTGGTGCTTCTGGAGTCTTTTATTTTaGCATGGTTCTCCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: GCSVMAMLTTSRACWWCFWSLLF*HGSPSN
Trigger: GTTTGAAGGAGAACCATGCCAAAATAAAAGACTCCA...GAAGCACCACCAGCATGCCCTGGATGTTGTCAACATGGCCATCACCGAGCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441914.5
CDS-3UTR CCA 90 bp CAAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGACTGTGCCCAGGATCAGCATaGCCTCACACATGTACTGTG +
Preference number: 4 (lower is better)
Translates to: QVWSPQNSPKALRVQVRLCPGSA*PHTCTV
Trigger: CACAGTACATGTGTGAGGCCATGCTGATCCTGGGCA...CAGTCTGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp CCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGACTGTTTCCCAAGGCATCAGGAGGTCATAGATaGCTGCGGCATTCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: PQNSPKALRVQVRLFPKASGGHR*LRHSAS
Trigger: GCTTGCAGAATGCCGCAGCCATCTATGACCTCCTGA...TGCCTTGGGAAACAGTCTGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CCA 90 bp TACATGCCCAGTGAATATACATGCTGCTTCAGACAAGCCTGCTTCCCCTCCAAGCTTGGGGAGCAAGTCTaGTCACCACAAAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: YMPSEYTCCFRQACFPSKLGEQV*SPQNSP
Trigger: TGGAGAGTTTTGTGGTGACCAGACTTGCTCCCCAAG...CTTGGAGGGGAAGCAGGCTTGTCTGAAGCAGCATGTATATTCACTGGGCATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp ACAAGCCTGCTTCCCCTCCAAGGGTTTCTTTATTCAACCTGCAAAGTCACTGTCTCCTTCCGAGGAAGGTaGAGCTATGATGAACCAGGG +
Preference number: 4 (lower is better)
Translates to: TSLLPLQGFLYSTCKVTVSFRGR*SYDEPG
Trigger: CCCTGGTTCATCATAGCTCCACCTTCCTCGGAAGGA...GACAGTGACTTTGCAGGTTGAATAAAGAAACCCTTGGAGGGGAAGCAGGCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp ACTCCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCTCTTTAAAAATCAGCTaGGCGCAGTGCCTCACTCCT +
Preference number: 4 (lower is better)
Translates to: TPSLRREPRNLIVFPLARSLKIS*AQCLTP
Trigger: AGGAGTGAGGCACTGCGCCCAGCTGATTTTTAAAGA...GCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR TCA 90 bp AAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGACTGTCCCTCTCAAAACAGGTaGTCACTTCCTCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: KSGHHKTLQRHLGFKSDCPSQNR*SLPPPS
Trigger: AGAGGGAGGAGGAAGTGATCACCTGTTTTGAGAGGG...ACAGTCTGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp AGACCTGAGAGAGATCCAGAAGTCTGTACTGTGCTGAGAGTGGGGAGTGAGAACACCTGGTACCAAAGGTaGAATTCTCCAAACGCAAAC +
Preference number: 4 (lower is better)
Translates to: RPERDPEVCTVLRVGSENTWYQR*NSPNAN
Trigger: GTTTGCGTTTGGAGAATTTCACCTTTGGTACCAGGT...GTTCTCACTCCCCACTCTCAGCACAGTACAGACTTCTGGATCTCTCTCAGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR TCA 90 bp TTCAAGTCAGACTGTTTCCCAAGGCACCAACAAAGAAATCCAGGAAGGCCCTCTCCGCATATAGAGTACTaGGTGAGAAGTGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: FKSDCFPRHQQRNPGRPSPHIEY*VRSGEE
Trigger: CTCTTCCCCACTTCTCACTCAGTACTCTATATGCGG...AGAGGGCCTTCCTGGATTTCTTTGTTGGTGCCTTGGGAAACAGTCTGACTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp ACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCAGTTTCTTCACATTGTGACCGACAGTCCTAGAAACTaGCTACCTCCATGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: TQKSHSLPTCPQFLHIVTDSPRN*LPPCWW
Trigger: CCACCAACATGGAGGTAGGCAGTTTCTAGGACTGTC...GGTCACAATGTGAAGAAACTGCGGGCAAGTGGGAAGACTATGAGATTTCTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp GGGAGCAAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAAATCATCTCGGGAAATaGAGTGCTGAGCTAGTGTGC +
Preference number: 4 (lower is better)
Translates to: GSKSGHHKTLQRHLGFKSNHLGK*SAELVC
Trigger: GCACACTAGCTCAGCACTGCATTTCCCGAGATGATT...TGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTTGCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp CTGCTCCAGCTTCACCTTGGTGAACATCAGGTTGAAGTTCTCAGGGTGCTCGGTAGTGAATATACATGCTaGTTCAGACAAGCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LLQLHLGEHQVEVLRVLGSEYTC*FRQACF
Trigger: GAAGCAGGCTTGTCTGAAGCAGCATGTATATTCACT...ACCGAGCACCCTGAGAACTTCAACCTGATGTTCACCAAGGTGAAGCTGGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR CCA 90 bp GATGTTCCCCTTCTTCAGGTTTTTCACATAGGCGCTCTGGAGGGCAGCTTCCAGTTATTAGGGGTGTACTaGTATGGACTTCTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: DVPLLQVFHIGALEGSFQLLGVY*YGLLSR
Trigger: TCTGCTGAGAAGTCCATACCAGTACACCCCTAATAA...CTGGAAGCTGCCCTCCAGAGCGCCTATGTGAAAAACCTGAAGAAGGGGAACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR CCA 90 bp TGGGCAAGACCTGAGAGAGATCCAGAAGTCTGTACTGTGCTGAGAGTGGGGAGTCAGTACGTTGGTATGTaGCATAACTTATTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: WARPERDPEVCTVLRVGSQYVGM*HNLLGV
Trigger: CACCCCTAATAAGTTATGCCACATACCAACGTACTG...ACTCCCCACTCTCAGCACAGTACAGACTTCTGGATCTCTCTCAGGTCTTGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp CTCTGGGCCTTTCAGCACCTGCTCCAGCTTCACCTTGGTGAACATCAGGTTGAATGCTTAGATAATTTTTaGCTTCGCTCATCTTCGGCT +
Preference number: 4 (lower is better)
Translates to: LWAFQHLLQLHLGEHQVECLDNF*LRSSSA
Trigger: AGCCGAAGATGAGCGAAGCCAAAAATTATCTAAGCA...TTCAACCTGATGTTCACCAAGGTGAAGCTGGAGCAGGTGCTGAAAGGCCCAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR GCA 90 bp AAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGACTGTAATCATCTCGGGAAATaGAGTGCTGAGCTAGTGTGC +
Preference number: 4 (lower is better)
Translates to: KSGHHKTLQRHLGFKSDCNHLGK*SAELVC
Trigger: GCACACTAGCTCAGCACTGCATTTCCCGAGATGATT...ACAGTCTGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR GCA 90 bp ACAAGCCTGCTTCCCCTCCAAGGGTTTCTTTATTCAACCTGCAAAGTCACTGTCAGTGAATATACATGCTaGTTCAGACAAGCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: TSLLPLQGFLYSTCKVTVSEYTC*FRQACF
Trigger: GAAGCAGGCTTGTCTGAAGCAGCATGTATATTCACT...GACAGTGACTTTGCAGGTTGAATAAAGAAACCCTTGGAGGGGAAGCAGGCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CCA 90 bp TACATGCCCAGTGAATATACATGCTGCTTCAGACAAGCCTGCTTCCCCTCCAAGTGCTTAGATAATTTTTaGCTTCGCTCATCTTCGGCT +
Preference number: 4 (lower is better)
Translates to: YMPSEYTCCFRQACFPSKCLDNF*LRSSSA
Trigger: AGCCGAAGATGAGCGAAGCCAAAAATTATCTAAGCA...CTTGGAGGGGAAGCAGGCTTGTCTGAAGCAGCATGTATATTCACTGGGCATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS GCA 90 bp CCTCGCCTGTTACCTCCGCCGCCGGGCATGCTCAGCGTCTGCAGCTaGCGGACCAGCTCCGGCATGCGGTCCCAGTGGCCCTCGGCGCGG +
Preference number: 5 (lower is better)
Translates to: PRLLPPPPGMLSVCS*RTSSGMRSQWPSAR
Trigger: CCGCGCCGAGGGCCACTGGGACCGCATGCCGGAGCTGGTCCGGCAGCTGCAGACGCTGAGCATGCCCGGCGGCGGAGGTAACAGGCGAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000441914.5
ENST00000461601.5
CDS GCA 90 bp GGGCTGCCTCGCCTGTTACCTCCGCCGCCGGGCATGCTCAGCGTCTaGAGCTGCCGGACCAGCTCCGGCATGCGGTCCCAGTGGCCCTCG +
Preference number: 5 (lower is better)
Translates to: GLPRLLPPPPGMLSV*SCRTSSGMRSQWPS
Trigger: CGAGGGCCACTGGGACCGCATGCCGGAGCTGGTCCGGCAGCTGCAGACGCTGAGCATGCCCGGCGGCGGAGGTAACAGGCGAGGCAGCCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000441914.5
ENST00000461601.5
CDS GCA 90 bp ACGCTGCGCTCGGGCTGCCTCGCCTGTTACCTCCGCCGCCGGGCATaGTCAGCGTCTGCAGCTGCCGGACCAGCTCCGGCATGCGGTCCC +
Preference number: 5 (lower is better)
Translates to: TLRSGCLACYLRRRA*SASAAAGPAPACGP
Trigger: GGGACCGCATGCCGGAGCTGGTCCGGCAGCTGCAGACGCTGAGCATGCCCGGCGGCGGAGGTAACAGGCGAGGCAGCCCGAGCGCAGCGT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000441914.5
ENST00000461601.5
CDS CCA 90 bp AGCCATCTTCTCGCGGGCGCTGTCATGGAAGGTGCGGCCAAGAAGTaGAGACCCGGCCGGGGGCGGCGTCCTGGCTGGGGCGCACTCGCG +
Preference number: 5 (lower is better)
Translates to: SHLLAGAVMEGAAKK*RPGRGRRPGWGALA
Trigger: CGCGAGTGCGCCCCAGCCAGGACGCCGCCCCCGGCCGGGTCTCCACTTCTTGGCCGCACCTTCCATGACAGCGCCCGCGAGAAGATGGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000461601.5
CDS CCA 90 bp GAGCCGTGCGCGCCCTTCGCAGCCATCTTCTCGCGGGCGCTGTCATaGAAGGTGCGGCCAAGAAGTGGAGACCCGGCCGGGGGCGGCGTC +
Preference number: 5 (lower is better)
Translates to: EPCAPFAAIFSRALS*KVRPRSGDPAGGGV
Trigger: GACGCCGCCCCCGGCCGGGTCTCCACTTCTTGGCCGCACCTTCCATGACAGCGCCCGCGAGAAGATGGCTGCGAAGGGCGCGCACGGCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000461601.5
CDS GCA 90 bp CGAAACCCAGGCCTGGATAGGGAGCTGCTGCCCCCTGAGGCCCCCTaGAGGCCTGGCCTCTTGGCCAGGGACAGCCCGGCTGGCACATGT +
Preference number: 5 (lower is better)
Translates to: RNPGLDRELLPPEAP*RPGLLARDSPAGTC
Trigger: ACATGTGCCAGCCGGGCTGTCCCTGGCCAAGAGGCCAGGCCTGCAGGGGGCCTCAGGGGGCAGCAGCTCCCTATCCAGGCCTGGGTTTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484337.5
CDS CCA 90 bp GCACGGGACCTTTCACATTCCGCGGCTTGGCCCGAAACCCAGGCCTaGATAGGGAGCTGCTGCCCCCTGAGGCCCCCTGCAGGCCTGGCC +
Preference number: 5 (lower is better)
Translates to: ARDLSHSAAWPETQA*IGSCCPLRPPAGLA
Trigger: GGCCAGGCCTGCAGGGGGCCTCAGGGGGCAGCAGCTCCCTATCCAGGCCTGGGTTTCGGGCCAAGCCGCGGAATGTGAAAGGTCCCGTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484337.5
CDS-3UTR CAA 90 bp TGGCCTCCTCCAGCCGGGAGGCGGCGATGGACGAAGCCCGCCGGGAGCCAGAGTTTCTGGGCCAAGCTCTaGTGGCCCAGCCGACTCAGC +
Preference number: 5 (lower is better)
Translates to: WPPPAGRRRWTKPAGSQSFWAKL*WPSRLS
Trigger: GCTGAGTCGGCTGGGCCACAAGAGCTTGGCCCAGAA...ACTCTGGCTCCCGGCGGGCTTCGTCCATCGCCGCCTCCCGGCTGGAGGAGGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS CCA 90 bp AGCACTCCTCACTCAGGGAGTGCAGCAGGACCCCCGCCAGGTGCTTaGCCGCCATCTGGCAGAGAGGGAAGCACTCGGACCCAGGCACAG +
Preference number: 5 (lower is better)
Translates to: STPHSGSAAGPPPGA*PPSGREGSTRTQAQ
Trigger: CTGTGCCTGGGTCCGAGTGCTTCCCTCTCTGCCAGATGGCGGCCAAGCACCTGGCGGGGGTCCTGCTGCACTCCCTGAGTGAGGAGTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484061.5
CDS-3UTR CAA 90 bp ACTGGGCGCCAGCTGCTGAGCCCTCTCCAGCGTCTGCAGTGCCTTCCGGTGCAACCCGCTGCCCAGCTCTaGGGGAGCAAGTCTGGTCAC +
Preference number: 5 (lower is better)
Translates to: TGRQLLSPLQRLQCLPVQPAAQL*GSKSGH
Trigger: GTGACCAGACTTGCTCCCCAAGAGCTGGGCAGCGGG...TTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGCTCAGCAGCTGGCGCCCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS CCA 90 bp CTCAGGGAGTGCAGCAGGACCCCCGCCAGGTGCTTGGCCGCCATCTaGCAGAGAGGGAAGCACTCGGACCCAGGCACAGTTGTCAGCTCT +
Preference number: 5 (lower is better)
Translates to: LRECSRTPARCLAAI*QRGKHSDPGTVVSS
Trigger: AGAGCTGACAACTGTGCCTGGGTCCGAGTGCTTCCCTCTCTGCCAGATGGCGGCCAAGCACCTGGCGGGGGTCCTGCTGCACTCCCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484061.5
CDS-3UTR CAA 90 bp TGGCCTCCTCCAGCCGGGAGGCGGCGATGGACGAAGCCCGCCGGGAGCCAGAGTTGCAATTCATCTTGCTaGGACTTCAGGGTGGCGTCG +
Preference number: 5 (lower is better)
Translates to: WPPPAGRRRWTKPAGSQSCNSSC*DFRVAS
Trigger: CGACGCCACCCTGAAGTCCAAGCAAGATGAATTGCA...ACTCTGGCTCCCGGCGGGCTTCGTCCATCGCCGCCTCCCGGCTGGAGGAGGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CAA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCCACAGCCTCAGCACTaGTCTGCAGGTCACGAGGGC +
Preference number: 5 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSPQPQH*SAGHEG
Trigger: GCCCTCGTGACCTGCAGACAAGTGCTGAGGCTGTGG...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CAA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCACCGTGAGCGCCTCCTaGTACAGCTGCTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSTVSAS*YSCLAS
Trigger: GGAGGCCAAGCAGCTGTACAAGGAGGCGCTCACGGT...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CAA 90 bp ACTGGGCGCCAGCTGCTGAGCCCTCTCCAGCGTCTGCAGTGCCTTCCGGTGCAAACCGTGAGCGCCTCCTaGTACAGCTGCTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: TGRQLLSPLQRLQCLPVQTVSAS*YSCLAS
Trigger: GGAGGCCAAGCAGCTGTACAAGGAGGCGCTCACGGT...TTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGCTCAGCAGCTGGCGCCCAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CAA 90 bp CCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCTGCTGGGTCGCATAGTCTaGCTGGGACTCCCGTGGAAG +
Preference number: 5 (lower is better)
Translates to: PEAPHLMPLLPHPDPRSLLGRIV*LGLPWK
Trigger: CTTCCACGGGAGTCCCAGCAAGACTATGCGACCCAG...CAGGGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409245.5
CDS CCA 90 bp ACAGGCATCTCCAAGCGTGCACGGGACCTTTCACATTCCGCGGCTTaGCCCGAAACCCAGGCCTGGATAGGGAGCTGCTGCCCCCTGAGG +
Preference number: 5 (lower is better)
Translates to: TGISKRARDLSHSAA*PETQAWIGSCCPLR
Trigger: CCTCAGGGGGCAGCAGCTCCCTATCCAGGCCTGGGTTTCGGGCCAAGCCGCGGAATGTGAAAGGTCCCGTGCACGCTTGGAGATGCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484337.5
CDS-3UTR CAA 90 bp CTCCTCCAGCCGGGAGGCGGCGATGGACGAAGCCCGCCGGGAGCCAGAGTCTGCAAAGAACTCTCCTCCTaGCCCATGAACTCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: LLQPGGGDGRSPPGARVCKELSS*PMNSGR
Trigger: TCTGCCTGAGTTCATGGGCAAGGAGGAGAGTTCTTT...GCAGACTCTGGCTCCCGGCGGGCTTCGTCCATCGCCGCCTCCCGGCTGGAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR CAA 90 bp GAGCAGTGCCAGCAGGTGGAGGGCGTGGGCATCATCCTTGCGTACCTTCAGGGCGCGTGGGCATCATCCTaGCGTACCTTCAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: EQCQQVEGVGIILAYLQGAWASS*RTFRAS
Trigger: GGAGGCCCTGAAGGTACGCAAGGATGATGCCCACGC...GCCCTGAAGGTACGCAAGGATGATGCCCACGCCCTCCACCTGCTGGCACTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR CAA 90 bp CAGCTGCAGCGAGACATAGAGGATGACCTGGGGGTCACTGGGCGCCAGCTGCTGGCGTGGGCATCATCCTaGCGTACCTTCAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: QLQRDIEDDLGVTGRQLLAWASS*RTFRAS
Trigger: GGAGGCCCTGAAGGTACGCAAGGATGATGCCCACGC...CAGCAGCTGGCGCCCAGTGACCCCCAGGTCATCCTCTATGTCTCGCTGCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR CAA 90 bp TCCAGGGCATGCTGGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGGTGGACCCCCGCCAGGTGCTaGGCCGCCATCACTTTGAAG +
Preference number: 5 (lower is better)
Translates to: SRACWWCFWAEKSSASRWTPARC*AAITLK
Trigger: CTTCAAAGTGATGGCGGCCAAGCACCTGGCGGGGGT...CCACCTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR CAA 90 bp GGGTGGGTGGAGATGGAAGTGTTAGGGCCGGTGCTCAGTACCCCTGGTCAGACCGCGTGGGCATCATCCTaGCGTACCTTCAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: GWVEMEVLGPVLSTPGQTAWASS*RTFRAS
Trigger: GGAGGCCCTGAAGGTACGCAAGGATGATGCCCACGC...GGTCTGACCAGGGGTACTGAGCACCGGCCCTAACACTTCCATCTCCACCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CAA 90 bp GGCCTCCCAGCTGGGAGAAGCTGTACAGGGTCTGCCACAGCCTCAGCACTTGTCCCACAGCCTCAGCACTaGTCTGCAGGTCACGAGGGC +
Preference number: 5 (lower is better)
Translates to: GLPAGRSCTGSATASALVPQPQH*SAGHEG
Trigger: GCCCTCGTGACCTGCAGACAAGTGCTGAGGCTGTGG...GACAAGTGCTGAGGCTGTGGCAGACCCTGTACAGCTTCTCCCAGCTGGGAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CAA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTTCTGGGCCAAGCTCTaGTGGCCCAGCCGACTCAGC +
Preference number: 5 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRFWAKL*WPSRLS
Trigger: GCTGAGTCGGCTGGGCCACAAGAGCTTGGCCCAGAA...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CAA 90 bp CCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCTGGCCGGCTCCAGCGTGTaGTGGTCGTTTCATCAAGAA +
Preference number: 5 (lower is better)
Translates to: PEAPHLMPLLPHPDPRSLAGSSV*WSFHQE
Trigger: TTCTTGATGAAACGACCACAACACGCTGGAGCCGGC...CAGGGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409245.5
CDS-3UTR CAA 90 bp CCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCTGGGAAGCAGGCCAATCTaGAAACGTAGGGTCCAAGGC +
Preference number: 5 (lower is better)
Translates to: PEAPHLMPLLPHPDPRSLGSRPI*KRRVQG
Trigger: GCCTTGGACCCTACGTTTCAAGATTGGCCTGCTTCC...CAGGGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409245.5
CDS-3UTR CAA 90 bp AGAAATCCAGGAAGGCCCTCTTGGCCCAGCCAAGAGAACGAGGGCTGCAGCTGCCGGGAGGCGATGGAGTaGGGTAGGCGTTCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: RNPGRPSWPSQENEGCSCREAME*GRRSRE
Trigger: CTCTCTGGAACGCCTACCCAACTCCATCGCCTCCCG...GCAGCTGCAGCCCTCGTTCTCTTGGCTGGGCCAAGAGGGCCTTCCTGGATTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CAA 90 bp ATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCAACCCCCGCCAGGTGCTaGGCCGCCATCACTTTGAAG +
Preference number: 5 (lower is better)
Translates to: MYFPEAPHLMPLLPHPDPTPARC*AAITLK
Trigger: CTTCAAAGTGATGGCGGCCAAGCACCTGGCGGGGGT...TGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CAA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCCGGTGCAATTCATCTaGCTTGGACTTCAGGGTGGC +
Preference number: 5 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSPVQFI*LGLQGG
Trigger: GCCACCCTGAAGTCCAAGCAAGATGAATTGCACCGG...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CAA 90 bp ATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCAGCGTGGGCATCATCCTaGCGTACCTTCAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: MYFPEAPHLMPLLPHPDPAWASS*RTFRAS
Trigger: GGAGGCCCTGAAGGTACGCAAGGATGATGCCCACGC...TGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CAA 90 bp ACATCCAGGGCATGCTGGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGGCCACAGCCTCAGCACTaGTCTGCAGGTCACGAGGGC +
Preference number: 5 (lower is better)
Translates to: TSRACWWCFWAEKSSASRPQPQH*SAGHEG
Trigger: GCCCTCGTGACCTGCAGACAAGTGCTGAGGCTGTGG...CCTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCTGGATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CAA 90 bp ATGGGGCCCTGCTTCAGGACCGAAGAGGGCATAGTCAGCTCTGACATGGCCTCCTTCTGGGCCAAGCTCTaGTGGCCCAGCCGACTCAGC +
Preference number: 5 (lower is better)
Translates to: MGPCFRTEEGIVSSDMASFWAKL*WPSRLS
Trigger: GCTGAGTCGGCTGGGCCACAAGAGCTTGGCCCAGAA...GGAGGCCATGTCAGAGCTGACTATGCCCTCTTCGGTCCTGAAGCAGGGCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CAA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCCGCTGCCCAGCTCTaGGGGAGCAAGTCTGGTCAC +
Preference number: 5 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDPAAQL*GSKSGH
Trigger: GTGACCAGACTTGCTCCCCAAGAGCTGGGCAGCGGG...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CAA 90 bp GCTCCATGGCACTGGAGATCTGTCGGACGAGGGCCAGCTGCAGCGAGACATAGAGACGTGAGTCCTGCCTaGGCCTCTCCCAGCAATGCC +
Preference number: 5 (lower is better)
Translates to: APWHWRSVGRGPAAARHRDVSPA*ASPSNA
Trigger: GGCATTGCTGGGAGAGGCCAAGGCAGGACTCACGTC...TCTATGTCTCGCTGCAGCTGGCCCTCGTCCGACAGATCTCCAGTGCCATGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR CAA 90 bp CTGGGGACAGTCCTAGAAACTGCCTACCTCCATGTTGGTGGCCCTCAAGGGACCACCCCCGCCAGGTGCTaGGCCGCCATCACTTTGAAG +
Preference number: 5 (lower is better)
Translates to: LGTVLETAYLHVGGPQGTTPARC*AAITLK
Trigger: CTTCAAAGTGATGGCGGCCAAGCACCTGGCGGGGGT...GGTCCCTTGAGGGCCACCAACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CAA 90 bp CCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCCTGAAAGAACTCTCCTCCTaGCCCATGAACTCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: PEAPHLMPLLPHPDPRSLKELSS*PMNSGR
Trigger: TCTGCCTGAGTTCATGGGCAAGGAGGAGAGTTCTTT...CAGGGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CAA 90 bp GGGCTGTGGGTGGTGAGATGTACTGGGGACAGTCCTAGAAACTGCCTACCTCCAGCCTACGGAGGCTGCTaGGGCTGGAGCACATCGCCA +
Preference number: 5 (lower is better)
Translates to: GLWVVRCTGDSPRNCLPPAYGGC*GWSTSP
Trigger: TGGCGATGTGCTCCAGCCCAAGCAGCCTCCGTAGGC...TGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCTCACCACCCACAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CAA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTAGCGGCTGCCGCAGCTaGTGCAGTGGAGCTGGCAGA +
Preference number: 5 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPSGCRS*CSGAGR
Trigger: TCTGCCAGCTCCACTGCACAAGCTGCGGCAGCCGCT...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409245.5
CDS-3UTR CAA 90 bp TGCTCGGTGATGGCCATGTTGACAACATCCAGGGCATGCTGGTGGTGCTTCTGGGCGTGGGCATCATCCTaGCGTACCTTCAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: CSVMAMLTTSRACWWCFWAWASS*RTFRAS
Trigger: GGAGGCCCTGAAGGTACGCAAGGATGATGCCCACGC...CCAGAAGCACCACCAGCATGCCCTGGATGTTGTCAACATGGCCATCACCGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR CAA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCTTGGTGAACATCAGGTaGAAGTTCTCAGGGTGCTCG +
Preference number: 5 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSLVNIR*KFSGCS
Trigger: CGAGCACCCTGAGAACTTCAACCTGATGTTCACCAA...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CAA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCTGCTCCAGCTTCACCTaGGTGAACATCAGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSCSSFT*VNIRLK
Trigger: CTTCAACCTGATGTTCACCAAGGTGAAGCTGGAGCA...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CAA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTACCGTGAGCGCCTCCTaGTACAGCTGCTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPTVSAS*YSCLAS
Trigger: GGAGGCCAAGCAGCTGTACAAGGAGGCGCTCACGGT...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CAA 90 bp CACTTGCCCGCAGTTTCTTCACATTGTGACCGCCCTGGGCAAGACCTGAGAGAGTTCTGGGCCAAGCTCTaGTGGCCCAGCCGACTCAGC +
Preference number: 5 (lower is better)
Translates to: HLPAVSSHCDRPGQDLREFWAKL*WPSRLS
Trigger: GCTGAGTCGGCTGGGCCACAAGAGCTTGGCCCAGAA...CTCTCTCAGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACTGCGGGCAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CAA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACGTGAGTCCTGCCTaGGCCTCTCCCAGCAATGCC +
Preference number: 5 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPDVSPA*ASPSNA
Trigger: GGCATTGCTGGGAGAGGCCAAGGCAGGACTCACGTC...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS GCA 90 bp TCTGGGCTCCTAAAGTCTCCCAGCTGGGAGAAGCTGTACAGGGTCTaGCACAGCCTCAGCACTTGTCTGCAGGTCACGAGGGCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: SGLLKSPSWEKLYRV*HSLSTCLQVTRASS
Trigger: AGAGGAAGCCCTCGTGACCTGCAGACAAGTGCTGAGGCTGTGGCAGACCCTGTACAGCTTCTCCCAGCTGGGAGACTTTAGGAGCCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394850.6
CDS CCA 90 bp CTCTGGGGAGTCTGGAAGCCTTCTGGGCTCCTAAAGTCTCCCAGCTaGGAGAAGCTGTACAGGGTCTGCCACAGCCTCAGCACTTGTCTG +
Preference number: 5 (lower is better)
Translates to: LWGVWKPSGLLKSPS*EKLYRVCHSLSTCL
Trigger: CAGACAAGTGCTGAGGCTGTGGCAGACCCTGTACAGCTTCTCCCAGCTGGGAGACTTTAGGAGCCCAGAAGGCTTCCAGACTCCCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394850.6
CDS-3UTR CAA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCAGAGAGAGGCCTTaGATGACAAAAGCCTCCGAC +
Preference number: 5 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRSRERP*MTKASD
Trigger: GTCGGAGGCTTTTGTCATCAAAGGCCTCTCTCTGGA...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
CDS-3UTR CAA 90 bp TCCAGGGCATGCTGGTGGTGCTTCTGGGCAGAGAAGAGCAGTGCCAGCAGGTGGTCCAGAGAGAGGCCTTaGATGACAAAAGCCTCCGAC +
Preference number: 5 (lower is better)
Translates to: SRACWWCFWAEKSSASRWSRERP*MTKASD
Trigger: GTCGGAGGCTTTTGTCATCAAAGGCCTCTCTCTGGA...CCACCTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441914.5
CDS-3UTR CAA 90 bp TATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTGCAATTCATCTTGCTaGGACTTCAGGGTGGCGTCG +
Preference number: 5 (lower is better)
Translates to: YFPEAPHLMPLLPHPDPRCNSSC*DFRVAS
Trigger: CGACGCCACCCTGAAGTCCAAGCAAGATGAATTGCA...ACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CAA 90 bp TCTGCTTCCTCTAGCCAGCGAAGGGACCCGATGCAGACCTTCGCGGCCATCAGGTGCAATTCATCTTGCTaGGACTTCAGGGTGGCGTCG +
Preference number: 5 (lower is better)
Translates to: SASSSQRRDPMQTFAAIRCNSSC*DFRVAS
Trigger: CGACGCCACCCTGAAGTCCAAGCAAGATGAATTGCA...CCTGATGGCCGCGAAGGTCTGCATCGGGTCCCTTCGCTGGCTAGAGGAAGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CAA 90 bp GCTCCATGGCACTGGAGATCTGTCGGACGAGGGCCAGCTGCAGCGAGACATAGACCGGTGCAATTCATCTaGCTTGGACTTCAGGGTGGC +
Preference number: 5 (lower is better)
Translates to: APWHWRSVGRGPAAARHRPVQFI*LGLQGG
Trigger: GCCACCCTGAAGTCCAAGCAAGATGAATTGCACCGG...TCTATGTCTCGCTGCAGCTGGCCCTCGTCCGACAGATCTCCAGTGCCATGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR CAA 90 bp TCTCATAGTCTTCCCACTTGCCCGCAGTTTCTTCACATTGTGACCGCCCTGGGCACCGTGAGCGCCTCCTaGTACAGCTGCTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: SHSLPTCPQFLHIVTALGTVSAS*YSCLAS
Trigger: GGAGGCCAAGCAGCTGTACAAGGAGGCGCTCACGGT...GCCCAGGGCGGTCACAATGTGAAGAAACTGCGGGCAAGTGGGAAGACTATGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CAA 90 bp GCAGTTTCTTCACATTGTGACCGCCCTGGGCAAGACCTGAGAGAGATCCAGAAGCCCGCTGCCCAGCTCTaGGGGAGCAAGTCTGGTCAC +
Preference number: 5 (lower is better)
Translates to: AVSSHCDRPGQDLREIQKPAAQL*GSKSGH
Trigger: GTGACCAGACTTGCTCCCCAAGAGCTGGGCAGCGGG...CTTCTGGATCTCTCTCAGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CAA 90 bp TGGGTGGTGAGATGTACTGGGGACAGTCCTAGAAACTGCCTACCTCCATGTTGGGCCTACGGAGGCTGCTaGGGCTGGAGCACATCGCCA +
Preference number: 5 (lower is better)
Translates to: WVVRCTGDSPRNCLPPCWAYGGC*GWSTSP
Trigger: TGGCGATGTGCTCCAGCCCAAGCAGCCTCCGTAGGC...CCAACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCTCACCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CAA 90 bp CACTTGCCCGCAGTTTCTTCACATTGTGACCGCCCTGGGCAAGACCTGAGAGAGCTGCCTACCTCCATGTaGGTGGCCCTCAAGGGACCT +
Preference number: 5 (lower is better)
Translates to: HLPAVSSHCDRPGQDLRELPTSM*VALKGP
Trigger: AGGTCCCTTGAGGGCCACCAACATGGAGGTAGGCAG...CTCTCTCAGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACTGCGGGCAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CAA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCATCTTTCTTCCCAACTaGCAGCAGGACGAACCAAGA +
Preference number: 5 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSIFLPN*QQDEPR
Trigger: TCTTGGTTCGTCCTGCTGCAAGTTGGGAAGAAAGAT...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409245.5
CDS TCA 90 bp GGGCATCAGGCAAAGTCAGGTGCATGCCACTCTGCTTCTTCATGGTaGGGCCCTCACCGAAGCTGCCATCCTTTTCTAGGCCTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: GHQAKSGACHSASSW*GPHRSCHPFLGLLL
Trigger: GAGGAGGAGGCCTAGAAAAGGATGGCAGCTTCGGTGAGGGCCTCACCATGAAGAAGCAGAGTGGCATGCACCTGACTTTGCCTGATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394850.6
CDS GCA 90 bp AAGAGGCCCGCCGCCTCCTGGATGCAGAAACCTGCTTCCTTGAGGTaGTGCTGCTCCATGAACAGCTCAGTTGAAGTTCTCAGGGTGCTC +
Preference number: 5 (lower is better)
Translates to: KRPAASWMQKPASLR*CCSMNSSVEVLRVL
Trigger: GAGCACCCTGAGAACTTCAACTGAGCTGTTCATGGAGCAGCAGCACCTCAAGGAAGCAGGTTTCTGCATCCAGGAGGCGGCGGGCCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651101.1
CDS-3UTR CAA 90 bp TTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACCCACGTTCCTCGACGTGCTGTTATTaGTGGTCTTCTCCAATTCCT +
Preference number: 5 (lower is better)
Translates to: FPEAPHLMPLLPHPDPRSSTCCY*WSSPIP
Trigger: AGGAATTGGAGAAGACCACAAATAACAGCACGTCGA...GGAACGTGGGTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CAA 90 bp TGGGTGGTGAGATGTACTGGGGACAGTCCTAGAAACTGCCTACCTCCATGTTGGACCCCCGCCAGGTGCTaGGCCGCCATCACTTTGAAG +
Preference number: 5 (lower is better)
Translates to: WVVRCTGDSPRNCLPPCWTPARC*AAITLK
Trigger: CTTCAAAGTGATGGCGGCCAAGCACCTGGCGGGGGT...CCAACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCTCACCACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CAA 90 bp GCAGTTTCTTCACATTGTGACCGCCCTGGGCAAGACCTGAGAGAGATCCAGAAGTTCTGGGCCAAGCTCTaGTGGCCCAGCCGACTCAGC +
Preference number: 5 (lower is better)
Translates to: AVSSHCDRPGQDLREIQKFWAKL*WPSRLS
Trigger: GCTGAGTCGGCTGGGCCACAAGAGCTTGGCCCAGAA...CTTCTGGATCTCTCTCAGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CAA 90 bp ATCAGCAATGCCCGAGGGGATCTCTGTTCAGACGTGAGTCCTGCCTTGGCCTCTAGACCCCAAAGGCACTaGGTAGCAGGGGGAAAGAGC +
Preference number: 5 (lower is better)
Translates to: ISNARGDLCSDVSPALASRPQRH*VAGGKS
Trigger: GCTCTTTCCCCCTGCTACCAAGTGCCTTTGGGGTCT...AGAGGCCAAGGCAGGACTCACGTCTGAACAGAGATCCCCTCGGGCATTGCTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS GCA 90 bp TGGCTTGAGCCAGAGTCTGCATCATGGGCATCAGGCAAAGTCAGGTaGATGCCACTCTGCTTCTTCATGGTGAGGCCCTCACCGAAGCTG +
Preference number: 5 (lower is better)
Translates to: WLEPESASWASGKVR*MPLCFFMVRPSPKL
Trigger: CAGCTTCGGTGAGGGCCTCACCATGAAGAAGCAGAGTGGCATGCACCTGACTTTGCCTGATGCCCATGATGCAGACTCTGGCTCAAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496991.3
CDS GCA 90 bp ACCTTAGGCTTTCAGCAAAGGCAAGGTCTGGCCACTCTTGAGGGCTaGCTGGGACAATCAGGCAGACTGATTTGGTGGGCAGGGTTCCCA +
Preference number: 5 (lower is better)
Translates to: TLGFQQRQGLATLEG*LGQSGRLIWWAGFP
Trigger: TGGGAACCCTGCCCACCAAATCAGTCTGCCTGATTGTCCCAGGCAGCCCTCAAGAGTGGCCAGACCTTGCCTTTGCTGAAAGCCTAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651101.1
CDS-3UTR CAA 90 bp GGGCAAGCAGGGGCAATGCAGGAATCATCTACTAACTCCAAGTCTGAGAAGGGAGCGTGGGCATCATCCTaGCGTACCTTCAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: GQAGAMQESSTNSKSEKGAWASS*RTFRAS
Trigger: GGAGGCCCTGAAGGTACGCAAGGATGATGCCCACGC...TCCCTTCTCAGACTTGGAGTTAGTAGATGATTCCTGCATTGCCCCTGCTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CAA 90 bp AAGGCACTTGGTAGCAGGGGGAAAGAGCAAGGTGGGGCCCAGCTGGTCTCAGAGTTGGTGAACATCAGGTaGAAGTTCTCAGGGTGCTCG +
Preference number: 5 (lower is better)
Translates to: KALGSRGKEQGGAQLVSELVNIR*KFSGCS
Trigger: CGAGCACCCTGAGAACTTCAACCTGATGTTCACCAA...CTCTGAGACCAGCTGGGCCCCACCTTGCTCTTTCCCCCTGCTACCAAGTGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CAA 90 bp GGGCAAGCAGGGGCAATGCAGGAATCATCTACTAACTCCAAGTCTGAGAAGGGAACCGTGAGCGCCTCCTaGTACAGCTGCTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: GQAGAMQESSTNSKSEKGTVSAS*YSCLAS
Trigger: GGAGGCCAAGCAGCTGTACAAGGAGGCGCTCACGGT...TCCCTTCTCAGACTTGGAGTTAGTAGATGATTCCTGCATTGCCCCTGCTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CAA 90 bp CCAGCTCTTGGGGAGCAAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGCTGCCTACCTCCATGTaGGTGGCCCTCAAGGGACCT +
Preference number: 5 (lower is better)
Translates to: PALGEQVWSPQNSPKALRLPTSM*VALKGP
Trigger: AGGTCCCTTGAGGGCCACCAACATGGAGGTAGGCAG...CCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTTGCTCCCCAAGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS TCA 90 bp AACCATGCTGAGCACTCACTCTTCAACCAGACAGCACTCACTGCCTaGGCACATGGTAGAGAGACCGCTTCACGCAGCACTGCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: NHAEHSLFNQTALTA*AHGRETASRSTASL
Trigger: CAGGGAAGCAGTGCTGCGTGAAGCGGTCTCTCTACCATGTGCTCAGGCAGTGAGTGCTGTCTGGTTGAAGAGTGAGTGCTCAGCATGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474321.6
CDS-3UTR CAA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTTCCAGAGAGAGGCCTTaGATGACAAAAGCCTCCGAC +
Preference number: 5 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPSRERP*MTKASD
Trigger: GTCGGAGGCTTTTGTCATCAAAGGCCTCTCTCTGGA...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
CDS-3UTR CAA 90 bp TCCACGGCATCACGAAGCACCTTCTGGGCCAAGCTCTTGTGGCCCAGCCGACTCTCGACGTGCTGTTATTaGTGGTCTTCTCCAATTCCT +
Preference number: 5 (lower is better)
Translates to: STASRSTFWAKLLWPSRLSTCCY*WSSPIP
Trigger: AGGAATTGGAGAAGACCACAAATAACAGCACGTCGA...GAGTCGGCTGGGCCACAAGAGCTTGGCCCAGAAGGTGCTTCGTGATGCCGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CAA 90 bp CTGGGGACAGTCCTAGAAACTGCCTACCTCCATGTTGGTGGCCCTCAAGGGACCAAAGAACTCTCCTCCTaGCCCATGAACTCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: LGTVLETAYLHVGGPQGTKELSS*PMNSGR
Trigger: TCTGCCTGAGTTCATGGGCAAGGAGGAGAGTTCTTT...GGTCCCTTGAGGGCCACCAACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CAA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTTGCAATTCATCTTGCTaGGACTTCAGGGTGGCGTCG +
Preference number: 5 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPCNSSC*DFRVAS
Trigger: CGACGCCACCCTGAAGTCCAAGCAAGATGAATTGCA...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CAA 90 bp GAAGTTCTCAGGGTGCTCGGTGATGGCCATGTTGACAACATCCAGGGCATGCTGCCGGTGCAATTCATCTaGCTTGGACTTCAGGGTGGC +
Preference number: 5 (lower is better)
Translates to: EVLRVLGDGHVDNIQGMLPVQFI*LGLQGG
Trigger: GCCACCCTGAAGTCCAAGCAAGATGAATTGCACCGG...CAGCATGCCCTGGATGTTGTCAACATGGCCATCACCGAGCACCCTGAGAACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409825.5
ENST00000440051.1
ENST00000441914.5
CDS-3UTR CAA 90 bp GGGCTGCAGCTGCAGAGGCGTTCACTAAAGATGTATTTCCCTGAGGCCCCGCACTTGGTGAACATCAGGTaGAAGTTCTCAGGGTGCTCG +
Preference number: 5 (lower is better)
Translates to: GLQLQRRSLKMYFPEAPHLVNIR*KFSGCS
Trigger: CGAGCACCCTGAGAACTTCAACCTGATGTTCACCAA...GTGCGGGGCCTCAGGGAAATACATCTTTAGTGAACGCCTCTGCAGCTGCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CAA 90 bp ACCTCTGACCACCGGGACTGTGTTCCCCCAAGAAGCCGGAGGCATGCTTTGATGTTGGTGAACATCAGGTaGAAGTTCTCAGGGTGCTCG +
Preference number: 5 (lower is better)
Translates to: TSDHRDCVPPRSRRHALMLVNIR*KFSGCS
Trigger: CGAGCACCCTGAGAACTTCAACCTGATGTTCACCAA...CATCAAAGCATGCCTCCGGCTTCTTGGGGGAACACAGTCCCGGTGGTCAGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR CAA 90 bp GGGTGCTCGGTGATGGCCATGTTGACAACATCCAGGGCATGCTGGTGGTGCTTCTGCTCCAGCTTCACCTaGGTGAACATCAGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: GCSVMAMLTTSRACWWCFCSSFT*VNIRLK
Trigger: CTTCAACCTGATGTTCACCAAGGTGAAGCTGGAGCA...GAAGCACCACCAGCATGCCCTGGATGTTGTCAACATGGCCATCACCGAGCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CAA 90 bp ACAAGCCTGCTTCCCCTCCAAGGGTTTCTTTATTCAACCTGCAAAGTCACTGTCGCCTACGGAGGCTGCTaGGGCTGGAGCACATCGCCA +
Preference number: 5 (lower is better)
Translates to: TSLLPLQGFLYSTCKVTVAYGGC*GWSTSP
Trigger: TGGCGATGTGCTCCAGCCCAAGCAGCCTCCGTAGGC...GACAGTGACTTTGCAGGTTGAATAAAGAAACCCTTGGAGGGGAAGCAGGCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CAA 90 bp CTGGTCTCAGAGGGCAAGCAGGGGCAATGCAGGAATCATCTACTAACTCCAAGTCTGCCTACCTCCATGTaGGTGGCCCTCAAGGGACCT +
Preference number: 5 (lower is better)
Translates to: LVSEGKQGQCRNHLLTPSLPTSM*VALKGP
Trigger: AGGTCCCTTGAGGGCCACCAACATGGAGGTAGGCAG...ACTTGGAGTTAGTAGATGATTCCTGCATTGCCCCTGCTTGCCCTCTGAGACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CAA 90 bp GTGCTCGGTGATGGCCATGTTGACAACATCCAGGGCATGCTGGTGGTGCTTCTGTGCAATTCATCTTGCTaGGACTTCAGGGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: VLGDGHVDNIQGMLVVLLCNSSC*DFRVAS
Trigger: GCTGGCCACCCTGAAGTCCAAGCAAGATGAATTGCA...CAGAAGCACCACCAGCATGCCCTGGATGTTGTCAACATGGCCATCACCGAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440051.1
CDS TCA 90 bp AGAGAGAGGCCTTTGATGACAAAAGCCTCCGACAGCAGCCGCATCTaGTACAGGGGCTTGTTCTCCATGGACATGTCATCAATCCCGGCC +
Preference number: 5 (lower is better)
Translates to: RERPLMTKASDSSRI*YRGLFSMDMSSIPA
Trigger: GGCCGGGATTGATGACATGTCCATGGAGAACAAGCCCCTGTATCAGATGCGGCTGCTGTCGGAGGCTTTTGTCATCAAAGGCCTCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000441914.5
CDS-3UTR CAA 90 bp GCAGTTTCTTCACATTGTGACCGCCCTGGGCAAGACCTGAGAGAGATCCAGAAGCCGGTGCAATTCATCTaGCTTGGACTTCAGGGTGGC +
Preference number: 5 (lower is better)
Translates to: AVSSHCDRPGQDLREIQKPVQFI*LGLQGG
Trigger: GCCACCCTGAAGTCCAAGCAAGATGAATTGCACCGG...CTTCTGGATCTCTCTCAGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CAA 90 bp AGGAACTCCCCGGCTTCCTCTCCGAGGCTGATCACCATCATGGCAAAGTGCTCTTTGGTGAACATCAGGTaGAAGTTCTCAGGGTGCTCG +
Preference number: 5 (lower is better)
Translates to: RNSPASSPRLITIMAKCSLVNIR*KFSGCS
Trigger: CGAGCACCCTGAGAACTTCAACCTGATGTTCACCAA...AGAGCACTTTGCCATGATGGTGATCAGCCTCGGAGAGGAAGCCGGGGAGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CAA 90 bp ACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCAGTTTCTTCACATTGTGACCCCACAGCCTCAGCACTaGTCTGCAGGTCACGAGGGC +
Preference number: 5 (lower is better)
Translates to: TQKSHSLPTCPQFLHIVTPQPQH*SAGHEG
Trigger: GCCCTCGTGACCTGCAGACAAGTGCTGAGGCTGTGG...GGTCACAATGTGAAGAAACTGCGGGCAAGTGGGAAGACTATGAGATTTCTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CAA 90 bp CCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCAGACTGTTTCCCAAGGCACCACAGCCTCAGCACTaGTCTGCAGGTCACGAGGGC +
Preference number: 5 (lower is better)
Translates to: PQNSPKALRVQVRLFPKAPQPQH*SAGHEG
Trigger: GCCCTCGTGACCTGCAGACAAGTGCTGAGGCTGTGG...TGCCTTGGGAAACAGTCTGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CAA 90 bp CCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCAGTAGACCCCAAAGGCACTaGGTAGCAGGGGGAAAGAGC +
Preference number: 5 (lower is better)
Translates to: PSLRREPRNLIVFPLARSRPQRH*VAGGKS
Trigger: GCTCTTTCCCCCTGCTACCAAGTGCCTTTGGGGTCT...ACTGCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CAA 90 bp GGGTGGGTGGAGATGGAAGTGTTAGGGCCGGTGCTCAGTACCCCTGGTCAGACCTGCAGGAGTAATGTGTaGACTCAGGGTATTAGAAAG +
Preference number: 5 (lower is better)
Translates to: GWVEMEVLGPVLSTPGQTCRSNV*TQGIRK
Trigger: CTTTCTAATACCCTGAGTCAACACATTACTCCTGCA...GGTCTGACCAGGGGTACTGAGCACCGGCCCTAACACTTCCATCTCCACCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CAA 90 bp TGGATGCAGAAACCTGCTTCCTTGAGGTGCTGCTGCTCCATGAACAGCTCAGCAAGCCGGAGGCATGCTTaGATGACAAAAGCCTCCGAC +
Preference number: 5 (lower is better)
Translates to: WMQKPASLRCCCSMNSSASRRHA*MTKASD
Trigger: GTCGGAGGCTTTTGTCATCAAAGCATGCCTCCGGCT...TGCTGAGCTGTTCATGGAGCAGCAGCACCTCAAGGAAGCAGGTTTCTGCATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR CAA 90 bp AAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTGACTCGACGTGCTGTTATTaGTGGTCTTCTCCAATTCCT +
Preference number: 5 (lower is better)
Translates to: KMYFPEAPHLMPLLPHPDSTCCY*WSSPIP
Trigger: AGGAATTGGAGAAGACCACAAATAACAGCACGTCGA...GTCAGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000409825.5
CDS-3UTR CAA 90 bp GCAGTTTCTTCACATTGTGACCGCCCTGGGCAAGACCTGAGAGAGATCCAGAAGTGCAATTCATCTTGCTaGGACTTCAGGGTGGCGTCG +
Preference number: 5 (lower is better)
Translates to: AVSSHCDRPGQDLREIQKCNSSC*DFRVAS
Trigger: CGACGCCACCCTGAAGTCCAAGCAAGATGAATTGCA...CTTCTGGATCTCTCTCAGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CAA 90 bp GGGCAAGCAGGGGCAATGCAGGAATCATCTACTAACTCCAAGTCTGAGAAGGGACCGGTGCAATTCATCTaGCTTGGACTTCAGGGTGGC +
Preference number: 5 (lower is better)
Translates to: GQAGAMQESSTNSKSEKGPVQFI*LGLQGG
Trigger: GCCACCCTGAAGTCCAAGCAAGATGAATTGCACCGG...TCCCTTCTCAGACTTGGAGTTAGTAGATGATTCCTGCATTGCCCCTGCTTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS CCA 90 bp GGCTCATTCTTCTCCAGCAAAGGCATGGAGTCTTTTATTTTGGCATaGTTCTCCTTCAAACACTGCTCCAGGAGGGCCTCAGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GSFFSSKGMESFILA*FSFKHCSRRASASS
Trigger: GCTGCTGGCTGAGGCCCTCCTGGAGCAGTGTTTGAAGGAGAACCATGCCAAAATAAAAGACTCCATGCCTTTGCTGGAGAAGAATGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000441914.5
ENST00000461601.5
CDS CCA 90 bp AATTTCACTGTTACAGATGTTCCTCTGGGGAGTCTGGAAGCCTTCTaGGCTCCTAAAGTCTCCCAGCTGGGAGAAGCTGTACAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: NFTVTDVPLGSLEAF*APKVSQLGEAVQGL
Trigger: CAGACCCTGTACAGCTTCTCCCAGCTGGGAGACTTTAGGAGCCCAGAAGGCTTCCAGACTCCCCAGAGGAACATCTGTAACAGTGAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394850.6
CDS-3UTR CAA 90 bp AGGAACTCCCCGGCTTCCTCTCCGAGGCTGATCACCATCATGGCAAAGTGCTCTTCGACGTGCTGTTATTaGTGGTCTTCTCCAATTCCT +
Preference number: 5 (lower is better)
Translates to: RNSPASSPRLITIMAKCSSTCCY*WSSPIP
Trigger: AGGAATTGGAGAAGACCACAAATAACAGCACGTCGA...AGAGCACTTTGCCATGATGGTGATCAGCCTCGGAGAGGAAGCCGGGGAGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS-3UTR CAA 90 bp GCAGTTTCTTCACATTGTGACCGCCCTGGGCAAGACCTGAGAGAGATCCAGAAGAAAGAACTCTCCTCCTaGCCCATGAACTCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: AVSSHCDRPGQDLREIQKKELSS*PMNSGR
Trigger: TCTGCCTGAGTTCATGGGCAAGGAGGAGAGTTCTTT...CTTCTGGATCTCTCTCAGGTCTTGCCCAGGGCGGTCACAATGTGAAGAAACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CAA 90 bp TTCAAGTCAGACTGTTTCCCAAGGCACCAACAAAGAAATCCAGGAAGGCCCTCTAGACCCCAAAGGCACTaGGTAGCAGGGGGAAAGAGC +
Preference number: 5 (lower is better)
Translates to: FKSDCFPRHQQRNPGRPSRPQRH*VAGGKS
Trigger: GCTCTTTCCCCCTGCTACCAAGTGCCTTTGGGGTCT...AGAGGGCCTTCCTGGATTTCTTTGTTGGTGCCTTGGGAAACAGTCTGACTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS CCA 90 bp CAAGCGGGTGACAGCCTTTCAGATGCCTCGACGTGCTGTTATTTGTaGTCTGGGAAGGGAAACAGAGAGAGAGCCATTGTCTCAAAGTTC +
Preference number: 5 (lower is better)
Translates to: QAGDSLSDASTCCYL*SGKGNRERAIVSKF
Trigger: GAACTTTGAGACAATGGCTCTCTCTCTGTTTCCCTTCCCAGACCACAAATAACAGCACGTCGAGGCATCTGAAAGGCTGTCACCCGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491786.5
CDS-3UTR CAA 90 bp GGGAGCAAGTCTGGTCACCACAAAACTCTCCAAAGGCACTTAGGGTTCAAGTCATCCAGAGAGAGGCCTTaGATGACAAAAGCCTCCGAC +
Preference number: 5 (lower is better)
Translates to: GSKSGHHKTLQRHLGFKSSRERP*MTKASD
Trigger: GTCGGAGGCTTTTGTCATCAAAGGCCTCTCTCTGGA...TGACTTGAACCCTAAGTGCCTTTGGAGAGTTTTGTGGTGACCAGACTTGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000394850.6
CDS-3UTR CAA 90 bp TGCATCATGGGCATCAGGCAAAGTCAGGTGCATGCCACTCTGCTTCTTCATGGTTGCTCCAGCTTCACCTaGGTGAACATCAGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: CIMGIRQSQVHATLLLHGCSSFT*VNIRLK
Trigger: CTTCAACCTGATGTTCACCAAGGTGAAGCTGGAGCA...ACCATGAAGAAGCAGAGTGGCATGCACCTGACTTTGCCTGATGCCCATGATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409825.5
ENST00000441914.5
CDS CCA 90 bp TCTTCGGCTCATTCTTCTCCAGCAAAGGCATGGAGTCTTTTATTTTaGCATGGTTCTCCTTCAAACACTGCTCCAGGAGGGCCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: SSAHSSPAKAWSLLF*HGSPSNTAPGGPQP
Trigger: TGGCTGAGGCCCTCCTGGAGCAGTGTTTGAAGGAGAACCATGCCAAAATAAAAGACTCCATGCCTTTGCTGGAGAAGAATGAGCCGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000441914.5
ENST00000461601.5
CDS-3UTR CAA 90 bp CTGTGGGTGGTGAGATGTACTGGGGACAGTCCTAGAAACTGCCTACCTCCATGTTCGACGTGCTGTTATTaGTGGTCTTCTCCAATTCCT +
Preference number: 5 (lower is better)
Translates to: LWVVRCTGDSPRNCLPPCSTCCY*WSSPIP
Trigger: AGGAATTGGAGAAGACCACAAATAACAGCACGTCGA...ACATGGAGGTAGGCAGTTTCTAGGACTGTCCCCAGTACATCTCACCACCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CAA 90 bp TACATGCCCAGTGAATATACATGCTGCTTCAGACAAGCCTGCTTCCCCTCCAAGTGCTCCAGCTTCACCTaGGTGAACATCAGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: YMPSEYTCCFRQACFPSKCSSFT*VNIRLK
Trigger: CTTCAACCTGATGTTCACCAAGGTGAAGCTGGAGCA...CTTGGAGGGGAAGCAGGCTTGTCTGAAGCAGCATGTATATTCACTGGGCATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS GCA 90 bp AAAGGCATGGAGTCTTTTATTTTGGCATGGTTCTCCTTCAAACACTaGTCCAGGAGGGCCTCAGCCAGCAGCAATTTCCCAAAGTCATCG +
Preference number: 5 (lower is better)
Translates to: KGMESFILAWFSFKH*SRRASASSNFPKSS
Trigger: CGATGACTTTGGGAAATTGCTGCTGGCTGAGGCCCTCCTGGAGCAGTGTTTGAAGGAGAACCATGCCAAAATAAAAGACTCCATGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000441914.5
ENST00000461601.5
CDS GCA 90 bp AAAGGCATGGAGTCTTTTATTTTGGCATGGTTCTCCTTCAAACACTaGTCCAGGAGGGCCTCAGCCAGCAGCAATTTCCCAAAGTCATCC +
Preference number: 5 (lower is better)
Translates to: KGMESFILAWFSFKH*SRRASASSNFPKSS
Trigger: GGATGACTTTGGGAAATTGCTGCTGGCTGAGGCCCTCCTGGAGCAGTGTTTGAAGGAGAACCATGCCAAAATAAAAGACTCCATGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409245.5
CDS-3UTR CAA 90 bp ACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCAGTTTCTTCACATTGTGACCTGCTCCAGCTTCACCTaGGTGAACATCAGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: TQKSHSLPTCPQFLHIVTCSSFT*VNIRLK
Trigger: CTTCAACCTGATGTTCACCAAGGTGAAGCTGGAGCA...GGTCACAATGTGAAGAAACTGCGGGCAAGTGGGAAGACTATGAGATTTCTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS-3UTR CAA 90 bp CAATTCCTGCAGGAACACCTGAGCGATCCAGGAGGCCCTCTCAAAACAGGTGATTGCAGGAGTAATGTGTaGACTCAGGGTATTAGAAAG +
Preference number: 5 (lower is better)
Translates to: QFLQEHLSDPGGPLKTGDCRSNV*TQGIRK
Trigger: CTTTCTAATACCCTGAGTCAACACATTACTCCTGCA...ATCACCTGTTTTGAGAGGGCCTCCTGGATCGCTCAGGTGTTCCTGCAGGAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409825.5
CDS-3UTR CAA 90 bp CTAAAGATGTATTTCCCTGAGGCCCCGCACCTGATGCCACTGTTGCCCCACCCTAATATCCACAGTACGTaGGTATGTGGCATAACTTAT +
Preference number: 5 (lower is better)
Translates to: LKMYFPEAPHLMPLLPHPNIHST*VCGITY
Trigger: ATAAGTTATGCCACATACCAACGTACTGTGGATATT...AGGGTGGGGCAACAGTGGCATCAGGTGCGGGGCCTCAGGGAAATACATCTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS-3UTR CAA 90 bp TTTTCTAGGCCTTTGAAGTTCTCAGGGTGCTCGGTGATGGCCATGTTGACAACATCCTTTTCTAGGCCTTaGAAGTTCTCAGGGTGCTCG +
Preference number: 5 (lower is better)
Translates to: FSRPLKFSGCSVMAMLTTSFSRP*KFSGCS
Trigger: CGAGCACCCTGAGAACTTCAAAGGCCTAGAAAAGGA...TGTTGTCAACATGGCCATCACCGAGCACCCTGAGAACTTCAAAGGCCTAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440051.1
CDS TCA 90 bp GAACCCAGGAGTTCGAGACGAGCTGGGCACCATGGAGACTCTTTTTaGATGTTAATCTTGTATAGGAGCACAGGTGTAAGGGCAGGATTA +
Preference number: 5 (lower is better)
Translates to: EPRSSRRAGHHGDSF*MLILYRSTGVRAGL
Trigger: TAATCCTGCCCTTACACCTGTGCTCCTATACAAGATTAACATTCAAAAAGAGTCTCCATGGTGCCCAGCTCGTCTCGAACTCCTGGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409245.5
CDS-3UTR CAA 90 bp CTGGTCTCAGAGGGCAAGCAGGGGCAATGCAGGAATCATCTACTAACTCCAAGTTGCAGGAGTAATGTGTaGACTCAGGGTATTAGAAAG +
Preference number: 5 (lower is better)
Translates to: LVSEGKQGQCRNHLLTPSCRSNV*TQGIRK
Trigger: CTTTCTAATACCCTGAGTCAACACATTACTCCTGCA...ACTTGGAGTTAGTAGATGATTCCTGCATTGCCCCTGCTTGCCCTCTGAGACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409825.5
CDS GCA 90 bp AGAATTGTAAAGAGCTCAGTCCATTCCTTTCTATTTGACTTGATCTaGCAAGGACATTACGTGGACTGTGGCCTCTGGCTTGAGCCAGAG +
Preference number: 5 (lower is better)
Translates to: RIVKSSVHSFLFDLI*QGHYVDCGLWLEPE
Trigger: CTCTGGCTCAAGCCAGAGGCCACAGTCCACGTAATGTCCTTGGCAGATCAAGTCAAATAGAAAGGAATGGACTGAGCTCTTTACAATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496991.3
CDS-3UTR CAA 90 bp CCAAGTCTGAGAAGGGAACCCAGAAATCTCATAGTCTTCCCACTTGCCCGCAGTAATATCCACAGTACGTaGGTATGTGGCATAACTTAT +
Preference number: 5 (lower is better)
Translates to: PSLRREPRNLIVFPLARSNIHST*VCGITY
Trigger: ATAAGTTATGCCACATACCAACGTACTGTGGATATT...ACTGCGGGCAAGTGGGAAGACTATGAGATTTCTGGGTTCCCTTCTCAGACTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319190.11
ENST00000409825.5
CDS GCA 90 bp TTCACAAGCCATGGGTTTCAGGATGAGTTTTTCCAGAAAAGAGTCTaGTTTCAGCTTAGAATTGTAAAGAGCTCAGTCCATTCCTTTCTA +
Preference number: 5 (lower is better)
Translates to: FTSHGFQDEFFQKRV*FQLRIVKSSVHSFL
Trigger: TAGAAAGGAATGGACTGAGCTCTTTACAATTCTAAGCTGAAAGCAGACTCTTTTCTGGAAAAACTCATCCTGAAACCCATGGCTTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496991.3
CDS CCA 72 bp CTCGCGGGCGCTGTCATGGAAGGTGCGGCCAAGAAGTaGAGACCCGGCCGGGGGCGGCGTCCTGGCTGGGGC +
Preference number: 6 (lower is better)
Translates to: LAGAVMEGAAKK*RPGRGRRPGWG
Trigger: GCCCCAGCCAGGACGCCGCCCCCGGCCGGGTCTCCACTTCTTGGCCGCACCTTCCATGACAGCGCCCGCGAG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000461601.5
CDS GCA 72 bp TTACCTCCGCCGCCGGGCATGCTCAGCGTCTGCAGCTaGCGGACCAGCTCCGGCATGCGGTCCCAGTGGCCC +
Preference number: 6 (lower is better)
Translates to: LPPPPGMLSVCS*RTSSGMRSQWP
Trigger: GGGCCACTGGGACCGCATGCCGGAGCTGGTCCGGCAGCTGCAGACGCTGAGCATGCCCGGCGGCGGAGGTAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000441914.5
ENST00000461601.5
CDS GCA 72 bp CGCCTGTTACCTCCGCCGCCGGGCATGCTCAGCGTCTaGAGCTGCCGGACCAGCTCCGGCATGCGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: RLLPPPPGMLSV*SCRTSSGMRSQ
Trigger: CTGGGACCGCATGCCGGAGCTGGTCCGGCAGCTGCAGACGCTGAGCATGCCCGGCGGCGGAGGTAACAGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000441914.5
ENST00000461601.5
CDS GCA 72 bp TCGGGCTGCCTCGCCTGTTACCTCCGCCGCCGGGCATaGTCAGCGTCTGCAGCTGCCGGACCAGCTCCGGCA +
Preference number: 6 (lower is better)
Translates to: SGCLACYLRRRA*SASAAAGPAPA
Trigger: TGCCGGAGCTGGTCCGGCAGCTGCAGACGCTGAGCATGCCCGGCGGCGGAGGTAACAGGCGAGGCAGCCCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000441914.5
ENST00000461601.5
CDS GCA 72 bp GCTGGGACTCCCGTGGAAGCGAACGGGGACAGCGGCTaGCGCAGCTTGTGCAGTGGAGCTGGCAGACGCTGG +
Preference number: 6 (lower is better)
Translates to: AGTPVEANGDSG*RSLCSGAGRRW
Trigger: CCAGCGTCTGCCAGCTCCACTGCACAAGCTGCGGCAGCCGCTGTCCCCGTTCGCTTCCACGGGAGTCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409245.5
CDS CCA 72 bp GCGCCCTTCGCAGCCATCTTCTCGCGGGCGCTGTCATaGAAGGTGCGGCCAAGAAGTGGAGACCCGGCCGGG +
Preference number: 6 (lower is better)
Translates to: APFAAIFSRALS*KVRPRSGDPAG
Trigger: CCCGGCCGGGTCTCCACTTCTTGGCCGCACCTTCCATGACAGCGCCCGCGAGAAGATGGCTGCGAAGGGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000461601.5
CDS CCA 72 bp CACTCAGGGAGTGCAGCAGGACCCCCGCCAGGTGCTTaGCCGCCATCTGGCAGAGAGGGAAGCACTCGGACC +
Preference number: 6 (lower is better)
Translates to: HSGSAAGPPPGA*PPSGREGSTRT
Trigger: GGTCCGAGTGCTTCCCTCTCTGCCAGATGGCGGCCAAGCACCTGGCGGGGGTCCTGCTGCACTCCCTGAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484061.5
CDS GCA 72 bp TCCTCACTCAGGGAGTGCAGCAGGACCCCCGCCAGGTaGTTGGCCGCCATCTGGCAGAGAGGGAAGCACTCG +
Preference number: 6 (lower is better)
Translates to: SSLRECSRTPAR*LAAIWQRGKHS
Trigger: CGAGTGCTTCCCTCTCTGCCAGATGGCGGCCAAGCACCTGGCGGGGGTCCTGCTGCACTCCCTGAGTGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484061.5
CDS CCA 72 bp TGCAGCAGGACCCCCGCCAGGTGCTTGGCCGCCATCTaGCAGAGAGGGAAGCACTCGGACCCAGGCACAGTT +
Preference number: 6 (lower is better)
Translates to: CSRTPARCLAAI*QRGKHSDPGTV
Trigger: AACTGTGCCTGGGTCCGAGTGCTTCCCTCTCTGCCAGATGGCGGCCAAGCACCTGGCGGGGGTCCTGCTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484061.5
CDS CAA 72 bp TCACTCAGGGAGTGCAGCAGGACCCCCGCCAGGTGCTaGGCCGCCATCTGGCAGAGAGGGAAGCACTCGGAC +
Preference number: 6 (lower is better)
Translates to: SLRECSRTPARC*AAIWQRGKHSD
Trigger: GTCCGAGTGCTTCCCTCTCTGCCAGATGGCGGCCAAGCACCTGGCGGGGGTCCTGCTGCACTCCCTGAGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484061.5
CDS CCA 72 bp CTGCAGGCCTGGCCTCTTGGCCAGGGACAGCCCGGCTaGCACATGTGTCCAGGGCTTAGTCAGAAGCCCACA +
Preference number: 6 (lower is better)
Translates to: LQAWPLGQGQPG*HMCPGLSQKPT
Trigger: TGTGGGCTTCTGACTAAGCCCTGGACACATGTGCCAGCCGGGCTGTCCCTGGCCAAGAGGCCAGGCCTGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484337.5
CDS CAA 90 bp GACAGGCATCTCCAAGCGTGCACGGGACCTTTCACATTCCGCGGCTaGGCCCGAAACCCAGGCCTGGATAGGGAGCTGCTGCCCCCTGAG +
Preference number: 6 (lower is better)
Translates to: DRHLQACTGPFTFRG*ARNPGLDRELLPPE
Trigger: CTCAGGGGGCAGCAGCTCCCTATCCAGGCCTGGGTTTCGGGCCAAGCCGCGGAATGTGAAAGGTCCCGTGCACGCTTGGAGATGCCTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484337.5
CDS GCA 72 bp TTTCCCAAAGTCATCGGTGTCCGGAAAGGTGAACGCTaGGCTCGGGCTGCCTCGCCTGTTACCTCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: FPKVIGVRKGER*ARAASPVTSAA
Trigger: GGCGGCGGAGGTAACAGGCGAGGCAGCCCGAGCGCAGCGTTCACCTTTCCGGACACCGATGACTTTGGGAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000441914.5
ENST00000461601.5
CDS CCA 72 bp TCCAAGCGTGCACGGGACCTTTCACATTCCGCGGCTTaGCCCGAAACCCAGGCCTGGATAGGGAGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: SKRARDLSHSAA*PETQAWIGSCC
Trigger: GCAGCAGCTCCCTATCCAGGCCTGGGTTTCGGGCCAAGCCGCGGAATGTGAAAGGTCCCGTGCACGCTTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484337.5
CDS CAA 72 bp CTCCAAGCGTGCACGGGACCTTTCACATTCCGCGGCTaGGCCCGAAACCCAGGCCTGGATAGGGAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: LQACTGPFTFRG*ARNPGLDRELL
Trigger: CAGCAGCTCCCTATCCAGGCCTGGGTTTCGGGCCAAGCCGCGGAATGTGAAAGGTCCCGTGCACGCTTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484337.5
CDS CAA 90 bp TGGCCGCCATCTGGCAGAGAGGGAAGCACTCGGACCCAGGCACAGTaGTCAGCTCTACCCCAGCATGACCTAGAACGCCCTCTGCCCATC +
Preference number: 6 (lower is better)
Translates to: WPPSGREGSTRTQAQ*SALPQHDLERPLPI
Trigger: GATGGGCAGAGGGCGTTCTAGGTCATGCTGGGGTAGAGCTGACAACTGTGCCTGGGTCCGAGTGCTTCCCTCTCTGCCAGATGGCGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484061.5
CDS GCA 72 bp TCCAGCGTCTGCAGTGCCTTCCGGTGCAATTCATCTTaGTTGGACTTCAGGGTGGCCAGCGAAGGGACCCGA +
Preference number: 6 (lower is better)
Translates to: SSVCSAFRCNSS*LDFRVASEGTR
Trigger: TCGGGTCCCTTCGCTGGCCACCCTGAAGTCCAAGCAAGATGAATTGCACCGGAAGGCACTGCAGACGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440051.1
ENST00000652568.1
CDS GCA 72 bp CACCTTGGTGAACATCAGGACAGGCATCTCCAAGCGTaGACGGGACCTTTCACATTCCGCGGCTTGGCCCGA +
Preference number: 6 (lower is better)
Translates to: HLGEHQDRHLQA*TGPFTFRGLAR
Trigger: TCGGGCCAAGCCGCGGAATGTGAAAGGTCCCGTGCACGCTTGGAGATGCCTGTCCTGATGTTCACCAAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484337.5
CDS GCA 72 bp CAGGTCACGAGGGCTTCCTCTGGGCCTTTCAGCACCTaGTCCAGCTTCACCTTGGTGAACATCAGGACAGGC +
Preference number: 6 (lower is better)
Translates to: QVTRASSGPFST*SSFTLVNIRTG
Trigger: GCCTGTCCTGATGTTCACCAAGGTGAAGCTGGAGCAGGTGCTGAAAGGCCCAGAGGAAGCCCTCGTGACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484337.5
CDS CCA 72 bp GCGTCTGCAGTGCCTTCCGGTGCAATTCATCTTGCTTaGACTTCAGGGTGGCCAGCGAAGGGACCCGATGCA +
Preference number: 6 (lower is better)
Translates to: ASAVPSGAIHLA*TSGWPAKGPDA
Trigger: TGCATCGGGTCCCTTCGCTGGCCACCCTGAAGTCCAAGCAAGATGAATTGCACCGGAAGGCACTGCAGACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440051.1
ENST00000652568.1
CDS CAA 72 bp TCCCTCTCTGTCAGGCGGAAGCGGGAGGCGATGGAGTaGGGTAGGCGTTCCAGAGAGAGGCCTTTGATGACA +
Preference number: 6 (lower is better)
Translates to: SLSVRRKREAME*GRRSRERPLMT
Trigger: TGTCATCAAAGGCCTCTCTCTGGAACGCCTACCCAACTCCATCGCCTCCCGCTTCCGCCTGACAGAGAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000441914.5
CDS CAA 72 bp TCTGGCAGAGAGGGAAGCACTCGGACCCAGGCACAGTaGTCAGCTCTACCCCAGCATGACCTAGAACGCCCT +
Preference number: 6 (lower is better)
Translates to: SGREGSTRTQAQ*SALPQHDLERP
Trigger: AGGGCGTTCTAGGTCATGCTGGGGTAGAGCTGACAACTGTGCCTGGGTCCGAGTGCTTCCCTCTCTGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484061.5
CDS CAA 90 bp ACTTCCTCCTCCCTCTCTGTCAGGCGGAAGCGGGAGGCGATGGAGTaGGGTAGGCGTTCCAGAGAGAGGCCTTTGATGACAAAAGCCTCC +
Preference number: 6 (lower is better)
Translates to: TSSSLSVRRKREAME*GRRSRERPLMTKAS
Trigger: GGAGGCTTTTGTCATCAAAGGCCTCTCTCTGGAACGCCTACCCAACTCCATCGCCTCCCGCTTCCGCCTGACAGAGAGGGAGGAGGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000441914.5
CDS CAA 90 bp ACGAACGGTACATGGAAGATGGTATTTGAACTGGGTCGCATAGTCTaGCTGGGACTCCCGTGGAAGCGAACGGGGACAGCGGCTGCCGCA +
Preference number: 6 (lower is better)
Translates to: TNGTWKMVFELGRIV*LGLPWKRTGTAAAA
Trigger: TGCGGCAGCCGCTGTCCCCGTTCGCTTCCACGGGAGTCCCAGCAAGACTATGCGACCCAGTTCAAATACCATCTTCCATGTACCGTTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409245.5
CDS GCA 72 bp CTAAAGTCTCCCAGCTGGGAGAAGCTGTACAGGGTCTaGCACAGCCTCAGCACTTGTCTGCAGGTCACGAGG +
Preference number: 6 (lower is better)
Translates to: LKSPSWEKLYRV*HSLSTCLQVTR
Trigger: CCTCGTGACCTGCAGACAAGTGCTGAGGCTGTGGCAGACCCTGTACAGCTTCTCCCAGCTGGGAGACTTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394850.6
CDS CCA 72 bp GACTGTGGCCTCTGGCTTGAGCCAGAGTCTGCATCATaGGCATCAGGCAAAGTCAGGTGCATGCCACTCTGC +
Preference number: 6 (lower is better)
Translates to: DCGLWLEPESAS*ASGKVRCMPLC
Trigger: GCAGAGTGGCATGCACCTGACTTTGCCTGATGCCCATGATGCAGACTCTGGCTCAAGCCAGAGGCCACAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496991.3
CDS CAA 72 bp AGGCCCGCCGCCTCCTGGATGCAGAAACCTGCTTCCTaGAGGTGCTGCTGCTCCATGAACAGCTCAGTTGAA +
Preference number: 6 (lower is better)
Translates to: RPAASWMQKPAS*RCCCSMNSSVE
Trigger: TTCAACTGAGCTGTTCATGGAGCAGCAGCACCTCAAGGAAGCAGGTTTCTGCATCCAGGAGGCGGCGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651101.1
CDS CCA 72 bp AGCCCTCCACGTAATGCAGTTTGCCCAGGATCAGCATaGCCTCACACATGTACTGTGGCGAGAGCCTCCCAT +
Preference number: 6 (lower is better)
Translates to: SPPRNAVCPGSA*PHTCTVARASH
Trigger: ATGGGAGGCTCTCGCCACAGTACATGTGTGAGGCCATGCTGATCCTGGGCAAACTGCATTACGTGGAGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000441914.5
ENST00000461601.5
CDS TCA 72 bp GAGCACTCACTCTTCAACCAGACAGCACTCACTGCCTaGGCACATGGTAGAGAGACCGCTTCACGCAGCACT +
Preference number: 6 (lower is better)
Translates to: EHSLFNQTALTA*AHGRETASRST
Trigger: AGTGCTGCGTGAAGCGGTCTCTCTACCATGTGCTCAGGCAGTGAGTGCTGTCTGGTTGAAGAGTGAGTGCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474321.6
CDS GCA 72 bp TTTCAGCAAAGGCAAGGTCTGGCCACTCTTGAGGGCTaGCTGGGACAATCAGGCAGACTGATTTGGTGGGCA +
Preference number: 6 (lower is better)
Translates to: FQQRQGLATLEG*LGQSGRLIWWA
Trigger: TGCCCACCAAATCAGTCTGCCTGATTGTCCCAGGCAGCCCTCAAGAGTGGCCAGACCTTGCCTTTGCTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651101.1
CDS GCA 72 bp GCCGCCTCCTGGATGCAGAAACCTGCTTCCTTGAGGTaGTGCTGCTCCATGAACAGCTCAGTTGAAGTTCTC +
Preference number: 6 (lower is better)
Translates to: AASWMQKPASLR*CCSMNSSVEVL
Trigger: GAGAACTTCAACTGAGCTGTTCATGGAGCAGCAGCACCTCAAGGAAGCAGGTTTCTGCATCCAGGAGGCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651101.1
CDS CAA 72 bp ACATGGAAGATGGTATTTGAACTGGGTCGCATAGTCTaGCTGGGACTCCCGTGGAAGCGAACGGGGACAGCG +
Preference number: 6 (lower is better)
Translates to: TWKMVFELGRIV*LGLPWKRTGTA
Trigger: CGCTGTCCCCGTTCGCTTCCACGGGAGTCCCAGCAAGACTATGCGACCCAGTTCAAATACCATCTTCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409245.5
CDS TCA 72 bp TGTTGTCCTTGGGGCAGTAGAGGCACTTTGAAGTTCTaGGTTGCTTTGGTCTCCACAGTCCGCAGCACCTCC +
Preference number: 6 (lower is better)
Translates to: CCPWGSRGTLKF*VALVSTVRSTS
Trigger: GGAGGTGCTGCGGACTGTGGAGACCAAAGCAACTCAGAACTTCAAAGTGCCTCTACTGCCCCAAGGACAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441914.5
CDS CCA 72 bp GTTACAGATGTTCCTCTGGGGAGTCTGGAAGCCTTCTaGGCTCCTAAAGTCTCCCAGCTGGGAGAAGCTGTA +
Preference number: 6 (lower is better)
Translates to: VTDVPLGSLEAF*APKVSQLGEAV
Trigger: TACAGCTTCTCCCAGCTGGGAGACTTTAGGAGCCCAGAAGGCTTCCAGACTCCCCAGAGGAACATCTGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394850.6
CDS TCA 72 bp TGGGAGACAGAAGCTCTGCATACAGCCATACACCCCTaGGATGTGCCTCTAAAGTTGGGTGCTAGGTTTGGC +
Preference number: 6 (lower is better)
Translates to: WETEALHTAIHP*DVPLKLGARFG
Trigger: GCCAAACCTAGCACCCAACTTTAGAGGCACATCTCAGGGGTGTATGGCTGTATGCAGAGCTTCTGTCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496991.3
CDS GCA 72 bp AGTCAAGCGGGTGACAGCCTTTCAGATGCCTCGACGTaGTGTTATTTGTGGTCCTCTACTGCAGGAGGACTT +
Preference number: 6 (lower is better)
Translates to: SQAGDSLSDAST*CYLWSSTAGGL
Trigger: AAGTCCTCCTGCAGTAGAGGACCACAAATAACAGCACGTCGAGGCATCTGAAAGGCTGTCACCCGCTTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474321.6
CDS GCA 72 bp AGTCAAGCGGGTGACAGCCTTTCAGATGCCTCGACGTaGTGTTATTTGTGGTCTGGGAAGGGAAACAGAGAG +
Preference number: 6 (lower is better)
Translates to: SQAGDSLSDAST*CYLWSGKGNRE
Trigger: CTCTCTGTTTCCCTTCCCAGACCACAAATAACAGCACGTCGAGGCATCTGAAAGGCTGTCACCCGCTTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491786.5
CDS CAA 72 bp GGTGACAGCCTTTCAGATGCCTCGACGTGCTGTTATTaGTGGTCCTCTACTGCAGGAGGACTTCTCTGTCTG +
Preference number: 6 (lower is better)
Translates to: GDSLSDASTCCY*WSSTAGGLLCL
Trigger: CAGACAGAGAAGTCCTCCTGCAGTAGAGGACCACAAATAACAGCACGTCGAGGCATCTGAAAGGCTGTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474321.6
CDS CAA 90 bp AGTCAAGCGGGTGACAGCCTTTCAGATGCCTCGACGTGCTGTTATTaGTGGTCTGGGAAGGGAAACAGAGAGAGAGCCATTGTCTCAAAG +
Preference number: 6 (lower is better)
Translates to: SQAGDSLSDASTCCY*WSGKGNRERAIVSK
Trigger: CTTTGAGACAATGGCTCTCTCTCTGTTTCCCTTCCCAGACCACAAATAACAGCACGTCGAGGCATCTGAAAGGCTGTCACCCGCTTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491786.5
CDS TCA 72 bp CCTTTGATGACAAAAGCCTCCGACAGCAGCCGCATCTaGTACAGGGGCTTGTTCTCCATGGACATGTCATCA +
Preference number: 6 (lower is better)
Translates to: PLMTKASDSSRI*YRGLFSMDMSS
Trigger: TGATGACATGTCCATGGAGAACAAGCCCCTGTATCAGATGCGGCTGCTGTCGGAGGCTTTTGTCATCAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319190.11
ENST00000394850.6
ENST00000409245.5
ENST00000441914.5
CDS CCA 72 bp GACAGCCTTTCAGATGCCTCGACGTGCTGTTATTTGTaGTCTGGGAAGGGAAACAGAGAGAGAGCCATTGTC +
Preference number: 6 (lower is better)
Translates to: DSLSDASTCCYL*SGKGNRERAIV
Trigger: GACAATGGCTCTCTCTCTGTTTCCCTTCCCAGACCACAAATAACAGCACGTCGAGGCATCTGAAAGGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491786.5
CDS GCA 72 bp AAGAGCTCAGTCCATTCCTTTCTATTTGACTTGATCTaGCAAGGACATTACGTGGACTGTGGCCTCTGGCTT +
Preference number: 6 (lower is better)
Translates to: KSSVHSFLFDLI*QGHYVDCGLWL
Trigger: AAGCCAGAGGCCACAGTCCACGTAATGTCCTTGGCAGATCAAGTCAAATAGAAAGGAATGGACTGAGCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496991.3
CDS CAA 90 bp CAGCTTAGAATTGTAAAGAGCTCAGTCCATTCCTTTCTATTTGACTaGATCTGCCAAGGACATTACGTGGACTGTGGCCTCTGGCTTGAG +
Preference number: 6 (lower is better)
Translates to: QLRIVKSSVHSFLFD*ICQGHYVDCGLWLE
Trigger: CTCAAGCCAGAGGCCACAGTCCACGTAATGTCCTTGGCAGATCAAGTCAAATAGAAAGGAATGGACTGAGCTCTTTACAATTCTAAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496991.3
CDS TCA 72 bp GTGCTAGGTTTGGCTTCTGAAATCAACTCTGTCATTTaGCAACAAAGGTGCAAGGCTTTGTCCACAGAAAGG +
Preference number: 6 (lower is better)
Translates to: VLGLASEINSVI*QQRCKALSTER
Trigger: CCTTTCTGTGGACAAAGCCTTGCACCTTTGTTGTCAAATGACAGAGTTGATTTCAGAAGCCAAACCTAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496991.3
CDS TCA 72 bp CCACTAAATACAACTCCACTCACACCTTCTTTCCCATaGCTAATTCTTGTGTTTTTGATGAAGGTGTTCTGC +
Preference number: 6 (lower is better)
Translates to: PLNTTPLTPSFP*LILVFLMKVFC
Trigger: GCAGAACACCTTCATCAAAAACACAAGAATTAGTCATGGGAAAGAAGGTGTGAGTGGAGTTGTATTTAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496991.3
CDS GCA 72 bp CATGGGTTTCAGGATGAGTTTTTCCAGAAAAGAGTCTaGTTTCAGCTTAGAATTGTAAAGAGCTCAGTCCAT +
Preference number: 6 (lower is better)
Translates to: HGFQDEFFQKRV*FQLRIVKSSVH
Trigger: ATGGACTGAGCTCTTTACAATTCTAAGCTGAAAGCAGACTCTTTTCTGGAAAAACTCATCCTGAAACCCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496991.3
CDS CAA 90 bp TACAGGGATGAATTCGATACAGGGATGATGTATTCGTTTCCCTATTaGTTCATGAGTCTGTTTTTAAGTAATCTGTCCTCTCTTGAATGT +
Preference number: 6 (lower is better)
Translates to: YRDEFDTGMMYSFPY*FMSLFLSNLSSLEC
Trigger: ACATTCAAGAGAGGACAGATTACTTAAAAACAGACTCATGAACAAATAGGGAAACGAATACATCATCCCTGTATCGAATTCATCCCTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409245.5