RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTC6 (Homo sapiens)

Ensembl gene IDs: ENSG00000139865

Ensembl transcript IDs: ENST00000267368.11, ENST00000382320.4, ENST00000476979.5, ENST00000478811.6, ENST00000533625.5, ENST00000553443.5, ENST00000553887.1, ENST00000554555.1, ENST00000555921.1, ENST00000556845.1

Found 539 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCGAGAAGCCAGGCGCAAGTCAACAGGCAGCTCCTGGGCTGGGATaGTGGTGCACAGATCATGAAGGTGCGGCATGGAGTAGTCTTGTG +
Preference number: 1 (lower is better)
Translates to: LEKPGASQQAAPGLG*WCTDHEGAAWSSLV
Trigger: CACAAGACTACTCCATGCCGCACCTTCATGATCTGTGCACCACCATCCCAGCCCAGGAGCTGCCTGTTGACTTGCGCCTGGCTTCTCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR CCA 90 bp GAGAAGCCAGGCGCAAGTCAACAGGCAGCTCCTGGGCTGGGATGGTaGTGCACAGATCATGAAGGTGCGGCATGGAGTAGTCTTGTGGAA +
Preference number: 1 (lower is better)
Translates to: EKPGASQQAAPGLGW*CTDHEGAAWSSLVE
Trigger: TTCCACAAGACTACTCCATGCCGCACCTTCATGATCTGTGCACCACCATCCCAGCCCAGGAGCTGCCTGTTGACTTGCGCCTGGCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR CCA 90 bp ATACACTCGAGAAGCCAGGCGCAAGTCAACAGGCAGCTCCTGGGCTaGGATGGTGGTGCACAGATCATGAAGGTGCGGCATGGAGTAGTC +
Preference number: 1 (lower is better)
Translates to: IHSRSQAQVNRQLLG*DGGAQIMKVRHGVV
Trigger: GACTACTCCATGCCGCACCTTCATGATCTGTGCACCACCATCCCAGCCCAGGAGCTGCCTGTTGACTTGCGCCTGGCTTCTCGAGTGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR TCA 90 bp CCAAATTTTCCAAGCAGGGTATCGTGGCCTTTCCTGTTAGCAGTGTaGTACACTCGAGAAGCCAGGCGCAAGTCAACAGGCAGCTCCTGG +
Preference number: 1 (lower is better)
Translates to: PNFPSRVSWPFLLAV*YTREARRKSTGSSW
Trigger: CCAGGAGCTGCCTGTTGACTTGCGCCTGGCTTCTCGAGTGTATCACACTGCTAACAGGAAAGGCCACGATACCCTGCTTGGAAAATTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR GCA 90 bp CAAGACTTCCAAGTGTGGTTTGTGAGCACGCTCTCTAGTTCCTTGTaGCAATTCAGGTGGTATCCCTTGCGGTGTCGGAGGAATATGGAC +
Preference number: 1 (lower is better)
Translates to: QDFQVWFVSTLSSSL*QFRWYPLRCRRNMD
Trigger: GTCCATATTCCTCCGACACCGCAAGGGATACCACCTGAATTGGCACAAGGAACTAGAGAGCGTGCTCACAAACCACACTTGGAAGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR CCA 90 bp GTGTGGTTTGTGAGCACGCTCTCTAGTTCCTTGTGCCAATTCAGGTaGTATCCCTTGCGGTGTCGGAGGAATATGGACATATTCTTGGTT +
Preference number: 1 (lower is better)
Translates to: VWFVSTLSSSLCQFR*YPLRCRRNMDIFLV
Trigger: AACCAAGAATATGTCCATATTCCTCCGACACCGCAAGGGATACCACCTGAATTGGCACAAGGAACTAGAGAGCGTGCTCACAAACCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR TCA 90 bp GATGGACGGCGGCCTTCCTATCCAGTAGAGAGCTTCATTGATGAGTaGAACGAAGATGTTCTTACTGGTCAACTTGCAGTAGAACACTGC +
Preference number: 1 (lower is better)
Translates to: DGRRPSYPVESFIDE*NEDVLTGQLAVEHC
Trigger: GCAGTGTTCTACTGCAAGTTGACCAGTAAGAACATCTTCGTTTCACTCATCAATGAAGCTCTCTACTGGATAGGAAGGCCGCCGTCCATC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR TCA 90 bp GCATTTCTTCCACAACTGTGTGCATATTGGATCCATGACTCCAAGTaGCCATCGCTTTGTGTTGTGACTAGCTTGGTCCTCTGGTTAGTG +
Preference number: 1 (lower is better)
Translates to: AFLPQLCAYWIHDSK*PSLCVVTSLVLWLV
Trigger: CACTAACCAGAGGACCAAGCTAGTCACAACACAAAGCGATGGTCACTTGGAGTCATGGATCCAATATGCACACAGTTGTGGAAGAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR CCA 90 bp GAATTCTGGATAAGCATACATTTCCTCTCCCAAGACTTCCAAGTGTaGTTTGTGAGCACGCTCTCTAGTTCCTTGTGCCAATTCAGGTGG +
Preference number: 1 (lower is better)
Translates to: EFWISIHFLSQDFQV*FVSTLSSSLCQFRW
Trigger: CCACCTGAATTGGCACAAGGAACTAGAGAGCGTGCTCACAAACCACACTTGGAAGTCTTGGGAGAGGAAATGTATGCTTATCCAGAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR CCA 90 bp GGGTGGTCGCTAATGAACGCTTCTAGTTTTCACGTTCTGCGTCAGTaGTTCTTGTTCAGACCTCGAGGAATCTTTCAAGAGATTTTGGAG +
Preference number: 1 (lower is better)
Translates to: GWSLMNASSFHVLRQ*FLFRPRGIFQEILE
Trigger: CTCCAAAATCTCTTGAAAGATTCCTCGAGGTCTGAACAAGAACCACTGACGCAGAACGTGAAAACTAGAAGCGTTCATTAGCGACCACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR TCA 90 bp GGAGTCAGTTGCACAATCAGTTTGTCCAATTGTATCCATCAGCCTTaGTTTCCTCATCAGTCAAACAAAGGGTGGTCGCTAATGAACGCT +
Preference number: 1 (lower is better)
Translates to: GVSCTISLSNCIHQP*FPHQSNKGWSLMNA
Trigger: AGCGTTCATTAGCGACCACCCTTTGTTTGACTGATGAGGAAATCAAGGCTGATGGATACAATTGGACAAACTGATTGTGCAACTGACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR CCA 90 bp CCTTGTGCCAATTCAGGTGGTATCCCTTGCGGTGTCGGAGGAATATaGACATATTCTTGGTTGTCATCCATAACAGGAATTCCATACAAT +
Preference number: 1 (lower is better)
Translates to: PCANSGGIPCGVGGI*TYSWLSSITGIPYN
Trigger: ATTGTATGGAATTCCTGTTATGGATGACAACCAAGAATATGTCCATATTCCTCCGACACCGCAAGGGATACCACCTGAATTGGCACAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR CCA 90 bp TCAGGTGGTATCCCTTGCGGTGTCGGAGGAATATGGACATATTCTTaGTTGTCATCCATAACAGGAATTCCATACAATATTCTATCTGTT +
Preference number: 1 (lower is better)
Translates to: SGGIPCGVGGIWTYS*LSSITGIPYNILSV
Trigger: AACAGATAGAATATTGTATGGAATTCCTGTTATGGATGACAACCAAGAATATGTCCATATTCCTCCGACACCGCAAGGGATACCACCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR CCA 90 bp AGCAATTCTGAGGTTCTCATCTTCATTAAACCTATGGCTGGAGATGGACGGCGGTCAACAGGCAGCTCCTaGGCTGGGATGGTGGTGCAC +
Preference number: 2 (lower is better)
Translates to: SNSEVLIFIKPMAGDGRRSTGSS*AGMVVH
Trigger: GTGCACCACCATCCCAGCCCAGGAGCTGCCTGTTGA...CCGCCGTCCATCTCCAGCCATAGGTTTAATGAAGATGAGAACCTCAGAATTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR GCA 90 bp AGCAATTCTGAGGTTCTCATCTTCATTAAACCTATGGCTGGAGATGGACGGCGGGGGCTGGGATGGTGGTaGACAGATCATGAAGGTGCG +
Preference number: 2 (lower is better)
Translates to: SNSEVLIFIKPMAGDGRRGLGWW*TDHEGA
Trigger: CGCACCTTCATGATCTGTGCACCACCATCCCAGCCC...CCGCCGTCCATCTCCAGCCATAGGTTTAATGAAGATGAGAACCTCAGAATTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR CAA 90 bp TCCCAAGACTTCCAAGTGTGGTTTGTGAGCACGCTCTCTAGTTCCTaGTGCCAATTCAGGTGGTATCCCTTGCGGTGTCGGAGGAATATG +
Preference number: 2 (lower is better)
Translates to: SQDFQVWFVSTLSSS*CQFRWYPLRCRRNM
Trigger: CATATTCCTCCGACACCGCAAGGGATACCACCTGAATTGGCACAAGGAACTAGAGAGCGTGCTCACAAACCACACTTGGAAGTCTTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR TCA 90 bp AGCAGTGTGATACACTCGAGAAGCCAGGCGCAAGTCAACAGGCAGCTCCTGGGCATCACAAAGAGGTTTTaGAGACTTTCTTGGTCTCAG +
Preference number: 2 (lower is better)
Translates to: SSVIHSRSQAQVNRQLLGITKRF*RLSWSQ
Trigger: CTGAGACCAAGAAAGTCTTCAAAACCTCTTTGTGAT...GCCCAGGAGCTGCCTGTTGACTTGCGCCTGGCTTCTCGAGTGTATCACACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR CCA 90 bp CGATCATCTAAGAAAGAGGTTCCAAATTTTCCAAGCAGGGTATCGTGGCCTTTCAGGCAGCTCCTGGGCTaGGATGGTGGTGCACAGATC +
Preference number: 2 (lower is better)
Translates to: RSSKKEVPNFPSRVSWPFRQLLG*DGGAQI
Trigger: GATCTGTGCACCACCATCCCAGCCCAGGAGCTGCCT...GAAAGGCCACGATACCCTGCTTGGAAAATTTGGAACCTCTTTCTTAGATGATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR CAA 90 bp GTGAGCACGCTCTCTAGTTCCTTGTGCCAATTCAGGTGGTATCCCTaGCGGTGTCGGAGGAATATGGACATATTCTTGGTTGTCATCCAT +
Preference number: 2 (lower is better)
Translates to: VSTLSSSLCQFRWYP*RCRRNMDIFLVVIH
Trigger: ATGGATGACAACCAAGAATATGTCCATATTCCTCCGACACCGCAAGGGATACCACCTGAATTGGCACAAGGAACTAGAGAGCGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR TCA 90 bp ATCTTCATTAAACCTATGGCTGGAGATGGACGGCGGCCTTCCTATCCAGTAGAGCTTTCTTGGTCTCAGTaGTTTACGTTTCCGCATTCG +
Preference number: 2 (lower is better)
Translates to: IFIKPMAGDGRRPSYPVELSWSQ*FTFPHS
Trigger: CGAATGCGGAAACGTAAATCACTGAGACCAAGAAAG...CTCTACTGGATAGGAAGGCCGCCGTCCATCTCCAGCCATAGGTTTAATGAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR TCA 90 bp AGCAATTCTGAGGTTCTCATCTTCATTAAACCTATGGCTGGAGATGGACGGCGGTGCATATTGGATCCATaGCTCCAAGTGACCATCGCT +
Preference number: 2 (lower is better)
Translates to: SNSEVLIFIKPMAGDGRRCILDP*LQVTIA
Trigger: AGCGATGGTCACTTGGAGTCATGGATCCAATATGCA...CCGCCGTCCATCTCCAGCCATAGGTTTAATGAAGATGAGAACCTCAGAATTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR CAA 90 bp TCGCTAATGAACGCTTCTAGTTTTCACGTTCTGCGTCAGTGGTTCTaGTTCAGACCTCGAGGAATCTTTCAAGAGATTTTGGAGGCTTGG +
Preference number: 2 (lower is better)
Translates to: SLMNASSFHVLRQWF*FRPRGIFQEILEAW
Trigger: CCAAGCCTCCAAAATCTCTTGAAAGATTCCTCGAGGTCTGAACAAGAACCACTGACGCAGAACGTGAAAACTAGAAGCGTTCATTAGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR TCA 90 bp AGCAATTCTGAGGTTCTCATCTTCATTAAACCTATGGCTGGAGATGGACGGCGGTTTCCAAAGGAGCTATaGTCTTCTCCTTCCTCAAGT +
Preference number: 2 (lower is better)
Translates to: SNSEVLIFIKPMAGDGRRFPKEL*SSPSSS
Trigger: ACTTGAGGAAGGAGAAGATCATAGCTCCTTTGGAAA...CCGCCGTCCATCTCCAGCCATAGGTTTAATGAAGATGAGAACCTCAGAATTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR CCA 90 bp AGAGAATTTAGGTGCAGCTGTATTCCAAAACAACTTCGTGAATTCTGGATAAGCCCTGGGCTGGGATGGTaGTGCACAGATCATGAAGGT +
Preference number: 2 (lower is better)
Translates to: REFRCSCIPKQLREFWISPGLGW*CTDHEG
Trigger: ACCTTCATGATCTGTGCACCACCATCCCAGCCCAGG...GCTTATCCAGAATTCACGAAGTTGTTTTGGAATACAGCTGCACCTAAATTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR CCA 90 bp TTGGTCCTCTGGTTAGTGTTATTCAAATGCATCCAGGAACTGATAAAACTTCTCGCTCCTGGGCTGGGATaGTGGTGCACAGATCATGAA +
Preference number: 2 (lower is better)
Translates to: LVLWLVLFKCIQELIKLLAPGLG*WCTDHE
Trigger: TTCATGATCTGTGCACCACCATCCCAGCCCAGGAGC...GAGAAGTTTTATCAGTTCCTGGATGCATTTGAATAACACTAACCAGAGGACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR CCA 90 bp CGAGGAATCTTTCAAGAGATTTTGGAGGCTTGGATAACTCTTCATGCACGAATACCAAGCAGGGTATCGTaGCCTTTCCTGTTAGCAGTG +
Preference number: 2 (lower is better)
Translates to: RGIFQEILEAWITLHARIPSRVS*PFLLAV
Trigger: CACTGCTAACAGGAAAGGCCACGATACCCTGCTTGG...TATTCGTGCATGAAGAGTTATCCAAGCCTCCAAAATCTCTTGAAAGATTCCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR TCA 90 bp CGAGGAATCTTTCAAGAGATTTTGGAGGCTTGGATAACTCTTCATGCACGAATATCCAAGTGTGGTTTGTaGGCACGCTCTCTAGTTCCT +
Preference number: 2 (lower is better)
Translates to: RGIFQEILEAWITLHARISKCGL*ARSLVP
Trigger: AGGAACTAGAGAGCGTGCTCACAAACCACACTTGGA...TATTCGTGCATGAAGAGTTATCCAAGCCTCCAAAATCTCTTGAAAGATTCCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR TCA 90 bp ACCTCGAGGAATCTTTCAAGAGATTTTGGAGGCTTGGATAACTCTTCATGCACGTTAGTGAGCTGGAGCTaGCGTTTCAATTCCTTTGCT +
Preference number: 2 (lower is better)
Translates to: TSRNLSRDFGGLDNSSCTLVSWS*RFNSFA
Trigger: AGCAAAGGAATTGAAACGTCAGCTCCAGCTCACTAA...CGTGCATGAAGAGTTATCCAAGCCTCCAAAATCTCTTGAAAGATTCCTCGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR TCA 90 bp TTGGTCCTCTGGTTAGTGTTATTCAAATGCATCCAGGAACTGATAAAACTTCTCTTCCTGTTAGCAGTGTaGTACACTCGAGAAGCCAGG +
Preference number: 2 (lower is better)
Translates to: LVLWLVLFKCIQELIKLLFLLAV*YTREAR
Trigger: CCTGGCTTCTCGAGTGTATCACACTGCTAACAGGAA...GAGAAGTTTTATCAGTTCCTGGATGCATTTGAATAACACTAACCAGAGGACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR GCA 90 bp ATCTTCATTAAACCTATGGCTGGAGATGGACGGCGGCCTTCCTATCCAGTAGAGTATCAGTTAAAAGTCTaGTTGCTTGAACACTCTCAT +
Preference number: 2 (lower is better)
Translates to: IFIKPMAGDGRRPSYPVEYQLKV*LLEHSH
Trigger: ATGAGAGTGTTCAAGCAAGCAGACTTTTAACTGATA...CTCTACTGGATAGGAAGGCCGCCGTCCATCTCCAGCCATAGGTTTAATGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR GCA 90 bp ATTCTGAGGTTCTCATCTTCATTAAACCTATGGCTGGAGATGGACGGCGGCCTTCACCTATCTTCAAACTaGTGCACTACATCAAATCAT +
Preference number: 2 (lower is better)
Translates to: ILRFSSSLNLWLEMDGGLHLSSN*CTTSNH
Trigger: ATGATTTGATGTAGTGCAGCAGTTTGAAGATAGGTG...AAGGCCGCCGTCCATCTCCAGCCATAGGTTTAATGAAGATGAGAACCTCAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR CCA 90 bp TTTATTTTGCTTAGTGAGCTGGAGCTGACGTTTCAATTCCTTTGCTTTCTGAAATTGTGCCAATTCAGGTaGTATCCCTTGCGGTGTCGG +
Preference number: 2 (lower is better)
Translates to: FILLSELELTFQFLCFLKLCQFR*YPLRCR
Trigger: CCGACACCGCAAGGGATACCACCTGAATTGGCACAA...TTTCAGAAAGCAAAGGAATTGAAACGTCAGCTCCAGCTCACTAAGCAAAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR CCA 90 bp ACCTCGAGGAATCTTTCAAGAGATTTTGGAGGCTTGGATAACTCTTCATGCACGCTTCATGACAGATTCTaGAACAGAGAATTTAGGTGC +
Preference number: 2 (lower is better)
Translates to: TSRNLSRDFGGLDNSSCTLHDRF*NREFRC
Trigger: GCACCTAAATTCTCTGTTCCAGAATCTGTCATGAAG...CGTGCATGAAGAGTTATCCAAGCCTCCAAAATCTCTTGAAAGATTCCTCGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR CAA 90 bp GGTGGTATCCCTTGCGGTGTCGGAGGAATATGGACATATTCTTGGTaGTCATCCATAACAGGAATTCCATACAATATTCTATCTGTTTGT +
Preference number: 2 (lower is better)
Translates to: GGIPCGVGGIWTYSW*SSITGIPYNILSVC
Trigger: ACAAACAGATAGAATATTGTATGGAATTCCTGTTATGGATGACAACCAAGAATATGTCCATATTCCTCCGACACCGCAAGGGATACCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR CAA 90 bp TTCAGGTGGTATCCCTTGCGGTGTCGGAGGAATATGGACATATTCTaGGTTGTCATCCATAACAGGAATTCCATACAATATTCTATCTGT +
Preference number: 2 (lower is better)
Translates to: FRWYPLRCRRNMDIF*VVIHNRNSIQYSIC
Trigger: ACAGATAGAATATTGTATGGAATTCCTGTTATGGATGACAACCAAGAATATGTCCATATTCCTCCGACACCGCAAGGGATACCACCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR GCA 90 bp AGAAAATCGAAGAACTCAGTGATCCAAATGTTGAAGGATTTACCACCACAATTGCTCTCTAGTTCCTTGTaGCAATTCAGGTGGTATCCC +
Preference number: 2 (lower is better)
Translates to: RKSKNSVIQMLKDLPPQLLSSSL*QFRWYP
Trigger: GGGATACCACCTGAATTGGCACAAGGAACTAGAGAG...CAATTGTGGTGGTAAATCCTTCAACATTTGGATCACTGAGTTCTTCGATTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR CCA 90 bp ATTCCAAAACAACTTCGTGAATTCTGGATAAGCATACATTTCCTCTCCCAAGACCATGAAGGTGCGGCATaGAGTAGTCTTGTGGAATTT +
Preference number: 2 (lower is better)
Translates to: IPKQLREFWISIHFLSQDHEGAA*SSLVEF
Trigger: AAATTCCACAAGACTACTCCATGCCGCACCTTCATG...GTCTTGGGAGAGGAAATGTATGCTTATCCAGAATTCACGAAGTTGTTTTGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR CAA 90 bp GTCATCTATACTTTCTTTCACATAGTTGGGCTCCTCAGTTTTATTTaGCTTAGTGAGCTGGAGCTGACGTTTCAATTCCTTTGCTTTCTG +
Preference number: 2 (lower is better)
Translates to: VIYTFFHIVGLLSFI*LSELELTFQFLCFL
Trigger: CAGAAAGCAAAGGAATTGAAACGTCAGCTCCAGCTCACTAAGCAAAATAAAACTGAGGAGCCCAACTATGTGAAAGAAAGTATAGATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR TCA 90 bp GAAGATGTTCTTACTGGTCAACTTGCAGTAGAACACTGCAGAATAATTAAATCAATCCATGACTCCAAGTaGCCATCGCTTTGTGTTGTG +
Preference number: 2 (lower is better)
Translates to: EDVLTGQLAVEHCRIIKSIHDSK*PSLCVV
Trigger: CACAACACAAAGCGATGGTCACTTGGAGTCATGGAT...TGATTTAATTATTCTGCAGTGTTCTACTGCAAGTTGACCAGTAAGAACATCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR CCA 90 bp TTCAGAGGTAGAAGATTTCAGGGACAGAGCAATGTCAACAGGAACCCAAGATTTCAACTTCGTGAATTCTaGATAAGCATACATTTCCTC +
Preference number: 2 (lower is better)
Translates to: FRGRRFQGQSNVNRNPRFQLREF*ISIHFL
Trigger: GAGGAAATGTATGCTTATCCAGAATTCACGAAGTTG...AAATCTTGGGTTCCTGTTGACATTGCTCTGTCCCTGAAATCTTCTACCTCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR TCA 90 bp TTAGGCTTCAAAGACAGGGCTTTATTAAGGTCTTCCTCAGCTAGTTCATATTGCTTAGGCAATACTCCATaGACTTTGCTTCCTCTTAAT +
Preference number: 2 (lower is better)
Translates to: LGFKDRALLRSSSASSYCLGNTP*TLLPLN
Trigger: ATTAAGAGGAAGCAAAGTTCATGGAGTATTGCCTAA...GCAATATGAACTAGCTGAGGAAGACCTTAATAAAGCCCTGTCTTTGAAGCCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478811.6
3UTR-3UTR TCA 90 bp GAACTCAGTGATCCAAATGTTGAAGGATTTACCACCACAATTGCCAGAAATAGCAAAAGTCTGCTTGCTTaGACACTCTCATATTTTGGA +
Preference number: 2 (lower is better)
Translates to: ELSDPNVEGFTTTIARNSKSLLA*TLSYFG
Trigger: TCCAAAATATGAGAGTGTTCAAGCAAGCAGACTTTT...GCTATTTCTGGCAATTGTGGTGGTAAATCCTTCAACATTTGGATCACTGAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR TCA 90 bp GAACTCAGTGATCCAAATGTTGAAGGATTTACCACCACAATTGCCAGAAATAGCAGTGAAAATTCCATTTaGATCCACTACTTGCCTGAT +
Preference number: 2 (lower is better)
Translates to: ELSDPNVEGFTTTIARNSSENSI*IHYLPD
Trigger: ATCAGGCAAGTAGTGGATTCAAATGGAATTTTCACT...GCTATTTCTGGCAATTGTGGTGGTAAATCCTTCAACATTTGGATCACTGAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR TCA 90 bp CTCATAACAAGAAATTCAGAGGTAGAAGATTTCAGGGACAGAGCAATGTCAACATCCAAAACAACTTCGTaGATTCTGGATAAGCATACA +
Preference number: 2 (lower is better)
Translates to: LITRNSEVEDFRDRAMSTSKTTS*ILDKHT
Trigger: TGTATGCTTATCCAGAATTCACGAAGTTGTTTTGGA...TGTTGACATTGCTCTGTCCCTGAAATCTTCTACCTCTGAATTTCTTGTTATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR CAA 90 bp GTTCTTGTTCAGACCTCGAGGAATCTTTCAAGAGATTTTGGAGGCTaGGATAACTCTTCATGCACGAATATAAGTTTTTGTTGTTTCAAT +
Preference number: 2 (lower is better)
Translates to: VLVQTSRNLSRDFGG*DNSSCTNISFCCFN
Trigger: ATTGAAACAACAAAAACTTATATTCGTGCATGAAGAGTTATCCAAGCCTCCAAAATCTCTTGAAAGATTCCTCGAGGTCTGAACAAGAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR GCA 90 bp CTCATAACAAGAAATTCAGAGGTAGAAGATTTCAGGGACAGAGCAATGTCAACATATTCCTTCCACAACTaGCAATTCTTCATTGAAAAC +
Preference number: 2 (lower is better)
Translates to: LITRNSEVEDFRDRAMSTYSFHN*QFFIEN
Trigger: GTTTTCAATGAAGAATTGGCAGTTGTGGAAGGAATA...TGTTGACATTGCTCTGTCCCTGAAATCTTCTACCTCTGAATTTCTTGTTATGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR GCA 90 bp CTCATAACAAGAAATTCAGAGGTAGAAGATTTCAGGGACAGAGCAATGTCAACACTTGCAGTAGAACACTaGAGAATAATTAAATCAGCT +
Preference number: 2 (lower is better)
Translates to: LITRNSEVEDFRDRAMSTLAVEH*RIIKSA
Trigger: AGCTGATTTAATTATTCTGCAGTGTTCTACTGCAAG...TGTTGACATTGCTCTGTCCCTGAAATCTTCTACCTCTGAATTTCTTGTTATGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR GCA 90 bp AGAAAATCGAAGAACTCAGTGATCCAAATGTTGAAGGATTTACCACCACAATTGACGTTTCAATTCCTTTaGTTTCTGAAACATAACCTC +
Preference number: 2 (lower is better)
Translates to: RKSKNSVIQMLKDLPPQLTFQFL*FLKHNL
Trigger: GAGGTTATGTTTCAGAAAGCAAAGGAATTGAAACGT...CAATTGTGGTGGTAAATCCTTCAACATTTGGATCACTGAGTTCTTCGATTTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR CCA 72 bp CCAGGCGCAAGTCAACAGGCAGCTCCTGGGCTGGGATaGTGGTGCACAGATCATGAAGGTGCGGCATGGAGT +
Preference number: 3 (lower is better)
Translates to: PGASQQAAPGLG*WCTDHEGAAWS
Trigger: ACTCCATGCCGCACCTTCATGATCTGTGCACCACCATCCCAGCCCAGGAGCTGCCTGTTGACTTGCGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR CCA 72 bp AGAAGCCAGGCGCAAGTCAACAGGCAGCTCCTGGGCTaGGATGGTGGTGCACAGATCATGAAGGTGCGGCAT +
Preference number: 3 (lower is better)
Translates to: RSQAQVNRQLLG*DGGAQIMKVRH
Trigger: ATGCCGCACCTTCATGATCTGTGCACCACCATCCCAGCCCAGGAGCTGCCTGTTGACTTGCGCCTGGCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR TCA 72 bp CCAAGCAGGGTATCGTGGCCTTTCCTGTTAGCAGTGTaGTACACTCGAGAAGCCAGGCGCAAGTCAACAGGC +
Preference number: 3 (lower is better)
Translates to: PSRVSWPFLLAV*YTREARRKSTG
Trigger: GCCTGTTGACTTGCGCCTGGCTTCTCGAGTGTATCACACTGCTAACAGGAAAGGCCACGATACCCTGCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR GCA 72 bp CAAGTGTGGTTTGTGAGCACGCTCTCTAGTTCCTTGTaGCAATTCAGGTGGTATCCCTTGCGGTGTCGGAGG +
Preference number: 3 (lower is better)
Translates to: QVWFVSTLSSSL*QFRWYPLRCRR
Trigger: CCTCCGACACCGCAAGGGATACCACCTGAATTGGCACAAGGAACTAGAGAGCGTGCTCACAAACCACACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR CCA 72 bp GTGAGCACGCTCTCTAGTTCCTTGTGCCAATTCAGGTaGTATCCCTTGCGGTGTCGGAGGAATATGGACATA +
Preference number: 3 (lower is better)
Translates to: VSTLSSSLCQFR*YPLRCRRNMDI
Trigger: TATGTCCATATTCCTCCGACACCGCAAGGGATACCACCTGAATTGGCACAAGGAACTAGAGAGCGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR CAA 90 bp AGCAATTCTGAGGTTCTCATCTTCATTAAACCTATGGCTGGAGATGGACGGCGGCTGCGTCAGTGGTTCTaGTTCAGACCTCGAGGAATC +
Preference number: 3 (lower is better)
Translates to: SNSEVLIFIKPMAGDGRRLRQWF*FRPRGI
Trigger: GATTCCTCGAGGTCTGAACAAGAACCACTGACGCAG...CCGCCGTCCATCTCCAGCCATAGGTTTAATGAAGATGAGAACCTCAGAATTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR TCA 72 bp CCACAACTGTGTGCATATTGGATCCATGACTCCAAGTaGCCATCGCTTTGTGTTGTGACTAGCTTGGTCCTC +
Preference number: 3 (lower is better)
Translates to: PQLCAYWIHDSK*PSLCVVTSLVL
Trigger: GAGGACCAAGCTAGTCACAACACAAAGCGATGGTCACTTGGAGTCATGGATCCAATATGCACACAGTTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR CAA 90 bp AGCAATTCTGAGGTTCTCATCTTCATTAAACCTATGGCTGGAGATGGACGGCGGTGTGTTGTGACTAGCTaGGTCCTCTGGTTAGTGTTA +
Preference number: 3 (lower is better)
Translates to: SNSEVLIFIKPMAGDGRRCVVTS*VLWLVL
Trigger: TAACACTAACCAGAGGACCAAGCTAGTCACAACACA...CCGCCGTCCATCTCCAGCCATAGGTTTAATGAAGATGAGAACCTCAGAATTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR TCA 72 bp TACATTTCCTCTCCCAAGACTTCCAAGTGTGGTTTGTaGGCACGCTCTCTAGTTCCTTGTGCCAATTCAGGT +
Preference number: 3 (lower is better)
Translates to: YISSPKTSKCGL*ARSLVPCANSG
Trigger: ACCTGAATTGGCACAAGGAACTAGAGAGCGTGCTCACAAACCACACTTGGAAGTCTTGGGAGAGGAAATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR GCA 72 bp TCTCTAGTTCCTTGTGCCAATTCAGGTGGTATCCCTTaGGGTGTCGGAGGAATATGGACATATTCTTGGTTG +
Preference number: 3 (lower is better)
Translates to: SLVPCANSGGIP*GVGGIWTYSWL
Trigger: CAACCAAGAATATGTCCATATTCCTCCGACACCGCAAGGGATACCACCTGAATTGGCACAAGGAACTAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR CCA 72 bp ATAAGCATACATTTCCTCTCCCAAGACTTCCAAGTGTaGTTTGTGAGCACGCTCTCTAGTTCCTTGTGCCAA +
Preference number: 3 (lower is better)
Translates to: ISIHFLSQDFQV*FVSTLSSSLCQ
Trigger: TTGGCACAAGGAACTAGAGAGCGTGCTCACAAACCACACTTGGAAGTCTTGGGAGAGGAAATGTATGCTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR TCA 72 bp CGGCCTTCCTATCCAGTAGAGAGCTTCATTGATGAGTaGAACGAAGATGTTCTTACTGGTCAACTTGCAGTA +
Preference number: 3 (lower is better)
Translates to: RPSYPVESFIDE*NEDVLTGQLAV
Trigger: TACTGCAAGTTGACCAGTAAGAACATCTTCGTTTCACTCATCAATGAAGCTCTCTACTGGATAGGAAGGCCG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR CCA 72 bp CTAATGAACGCTTCTAGTTTTCACGTTCTGCGTCAGTaGTTCTTGTTCAGACCTCGAGGAATCTTTCAAGAG +
Preference number: 3 (lower is better)
Translates to: LMNASSFHVLRQ*FLFRPRGIFQE
Trigger: CTCTTGAAAGATTCCTCGAGGTCTGAACAAGAACCACTGACGCAGAACGTGAAAACTAGAAGCGTTCATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR CAA 90 bp ATTCTGAGGTTCTCATCTTCATTAAACCTATGGCTGGAGATGGACGGCGGCCTTGTTTTGAAGACTTTCTaGGTCTCAGTGATTTACGTT +
Preference number: 3 (lower is better)
Translates to: ILRFSSSLNLWLEMDGGLVLKTF*VSVIYV
Trigger: AACGTAAATCACTGAGACCAAGAAAGTCTTCAAAAC...AAGGCCGCCGTCCATCTCCAGCCATAGGTTTAATGAAGATGAGAACCTCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR CAA 90 bp ATTCTGAGGTTCTCATCTTCATTAAACCTATGGCTGGAGATGGACGGCGGCCTTTGGACATATTCTTGGTaGTCATCCATAACAGGAATT +
Preference number: 3 (lower is better)
Translates to: ILRFSSSLNLWLEMDGGLWTYSW*SSITGI
Trigger: AATTCCTGTTATGGATGACAACCAAGAATATGTCCA...AAGGCCGCCGTCCATCTCCAGCCATAGGTTTAATGAAGATGAGAACCTCAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR CAA 90 bp TTTATTTTGCTTAGTGAGCTGGAGCTGACGTTTCAATTCCTTTGCTTTCTGAAATTCAGGTGGTATCCCTaGCGGTGTCGGAGGAATATG +
Preference number: 3 (lower is better)
Translates to: FILLSELELTFQFLCFLKFRWYP*RCRRNM
Trigger: CATATTCCTCCGACACCGCAAGGGATACCACCTGAA...TTTCAGAAAGCAAAGGAATTGAAACGTCAGCTCCAGCTCACTAAGCAAAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR TCA 72 bp TGCACAATCAGTTTGTCCAATTGTATCCATCAGCCTTaGTTTCCTCATCAGTCAAACAAAGGGTGGTCGCTA +
Preference number: 3 (lower is better)
Translates to: CTISLSNCIHQP*FPHQSNKGWSL
Trigger: TAGCGACCACCCTTTGTTTGACTGATGAGGAAATCAAGGCTGATGGATACAATTGGACAAACTGATTGTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR CCA 72 bp AATTCAGGTGGTATCCCTTGCGGTGTCGGAGGAATATaGACATATTCTTGGTTGTCATCCATAACAGGAATT +
Preference number: 3 (lower is better)
Translates to: NSGGIPCGVGGI*TYSWLSSITGI
Trigger: AATTCCTGTTATGGATGACAACCAAGAATATGTCCATATTCCTCCGACACCGCAAGGGATACCACCTGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR CAA 90 bp CTCATAACAAGAAATTCAGAGGTAGAAGATTTCAGGGACAGAGCAATGTCAACAACGCTCTCTAGTTCCTaGTGCCAATTCAGGTGGTAT +
Preference number: 3 (lower is better)
Translates to: LITRNSEVEDFRDRAMSTTLSSS*CQFRWY
Trigger: ATACCACCTGAATTGGCACAAGGAACTAGAGAGCGT...TGTTGACATTGCTCTGTCCCTGAAATCTTCTACCTCTGAATTTCTTGTTATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR CAA 90 bp TTCAGAGGTAGAAGATTTCAGGGACAGAGCAATGTCAACAGGAACCCAAGATTTTTGTATCCATCAGCCTaGATTTCCTCATCAGTCAAA +
Preference number: 3 (lower is better)
Translates to: FRGRRFQGQSNVNRNPRFLYPSA*ISSSVK
Trigger: TTTGACTGATGAGGAAATCAAGGCTGATGGATACAA...AAATCTTGGGTTCCTGTTGACATTGCTCTGTCCCTGAAATCTTCTACCTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR GCA 72 bp TTCCTTCATGACAGATTCTGGAACAGAGAATTTAGGTaGAGCTGTATTCCAAAACAACTTCGTGAATTCTGG +
Preference number: 3 (lower is better)
Translates to: FLHDRFWNREFR*SCIPKQLREFW
Trigger: CCAGAATTCACGAAGTTGTTTTGGAATACAGCTGCACCTAAATTCTCTGTTCCAGAATCTGTCATGAAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR GCA 72 bp GAAGATGTTCTTACTGGTCAACTTGCAGTAGAACACTaGAGAATAATTAAATCAGCTCCAAGTTTCCTTGCC +
Preference number: 3 (lower is better)
Translates to: EDVLTGQLAVEH*RIIKSAPSFLA
Trigger: GGCAAGGAAACTTGGAGCTGATTTAATTATTCTGCAGTGTTCTACTGCAAGTTGACCAGTAAGAACATCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR TCA 72 bp CCTGCAGTATTCCTTCCACAACTGCCAATTCTTCATTaGAAACACATTAAATTGTCTCTGCATTTCTTCCAC +
Preference number: 3 (lower is better)
Translates to: PAVFLPQLPILH*KHIKLSLHFFH
Trigger: GTGGAAGAAATGCAGAGACAATTTAATGTGTTTTCAATGAAGAATTGGCAGTTGTGGAAGGAATACTGCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR CAA 90 bp AAACAACTTCGTGAATTCTGGATAAGCATACATTTCCTCTCCCAAGACTTCCAAAATATGGACATATTCTaGGTTGTCATCCATAACAGG +
Preference number: 3 (lower is better)
Translates to: KQLREFWISIHFLSQDFQNMDIF*VVIHNR
Trigger: CCTGTTATGGATGACAACCAAGAATATGTCCATATT...TTGGAAGTCTTGGGAGAGGAAATGTATGCTTATCCAGAATTCACGAAGTTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR CAA 90 bp CTCTGGTTAGTGTTATTCAAATGCATCCAGGAACTGATAAAACTTCTCAAACAAGATTTACCACCACAATaGCCAGAAATAGCATCTCAG +
Preference number: 3 (lower is better)
Translates to: LWLVLFKCIQELIKLLKQDLPPQ*PEIASQ
Trigger: CTGAGATGCTATTTCTGGCAATTGTGGTGGTAAATC...TTGTTTGAGAAGTTTTATCAGTTCCTGGATGCATTTGAATAACACTAACCAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR GCA 72 bp GTGACTAGCTTGGTCCTCTGGTTAGTGTTATTCAAATaGATCCAGGAACTGATAAAACTTCTCAAACAATTT +
Preference number: 3 (lower is better)
Translates to: VTSLVLWLVLFK*IQELIKLLKQF
Trigger: AAATTGTTTGAGAAGTTTTATCAGTTCCTGGATGCATTTGAATAACACTAACCAGAGGACCAAGCTAGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR CAA 90 bp AGAAAATCGAAGAACTCAGTGATCCAAATGTTGAAGGATTTACCACCACAATTGTATCACAAAGAGGTTTaGAAGACTTTCTTGGTCTCA +
Preference number: 3 (lower is better)
Translates to: RKSKNSVIQMLKDLPPQLYHKEV*KTFLVS
Trigger: TGAGACCAAGAAAGTCTTCAAAACCTCTTTGTGATA...CAATTGTGGTGGTAAATCCTTCAACATTTGGATCACTGAGTTCTTCGATTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR-3UTR CAA 90 bp CTCTGGTTAGTGTTATTCAAATGCATCCAGGAACTGATAAAACTTCTCAAACAATCAGTGATCCAAATGTaGAAGGATTTACCACCACAA +
Preference number: 3 (lower is better)
Translates to: LWLVLFKCIQELIKLLKQSVIQM*KDLPPQ
Trigger: TTGTGGTGGTAAATCCTTCAACATTTGGATCACTGA...TTGTTTGAGAAGTTTTATCAGTTCCTGGATGCATTTGAATAACACTAACCAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp AGCAATTCTGAGGTTCTCATCTTCATTAAACCTATGGCTGGAGATGGACGGCGGCGCTCCCTTCCCAAGTaGAAGACCCGCCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: SNSEVLIFIKPMAGDGRRRSLPK*KTRLGA
Trigger: GGCTCCCAGGCGGGTCTTCCACTTGGGAAGGGAGCG...CCGCCGTCCATCTCCAGCCATAGGTTTAATGAAGATGAGAACCTCAGAATTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp GTGTGGTTTGTGAGCACGCTCTCTAGTTCCTTGTGCCAATTCAGGTGGTATCCCCTGCGGAGACGGAGCTaGCCTTCCTCTCTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: VWFVSTLSSSLCQFRWYPLRRRS*PSSLWP
Trigger: TGGCCAAAGAGAGGAAGGCCAGCTCCGTCTCCGCAG...GGGATACCACCTGAATTGGCACAAGGAACTAGAGAGCGTGCTCACAAACCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp GAATTCTGGATAAGCATACATTTCCTCTCCCAAGACTTCCAAGTGTGGTTTGTGTCTCGACGTCCGGGCTaGGGCGCAGGAAACGCGCGC +
Preference number: 4 (lower is better)
Translates to: EFWISIHFLSQDFQVWFVSRRPG*GAGNAR
Trigger: GCGCGCGTTTCCTGCGCCGCAGCCCGGACGTCGAGA...CACAAACCACACTTGGAAGTCTTGGGAGAGGAAATGTATGCTTATCCAGAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp GAATTCTGGATAAGCATACATTTCCTCTCCCAAGACTTCCAAGTGTGGTTTGTGCGACCGGGTCTTGCCTaGAGCCGCCGCCTCACCCAG +
Preference number: 4 (lower is better)
Translates to: EFWISIHFLSQDFQVWFVRPGLA*SRRLTQ
Trigger: CTGGGTGAGGCGGCGGCTCCAGGCAAGACCCGGTCG...CACAAACCACACTTGGAAGTCTTGGGAGAGGAAATGTATGCTTATCCAGAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp GTGTGGTTTGTGAGCACGCTCTCTAGTTCCTTGTGCCAATTCAGGTGGTATCCCAGAGGAGCTACCTCCTaGCTCTGTTCGCGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: VWFVSTLSSSLCQFRWYPRGATS*LCSRSL
Trigger: AAGGGAGCGCGAACAGAGCCAGGAGGTAGCTCCTCT...GGGATACCACCTGAATTGGCACAAGGAACTAGAGAGCGTGCTCACAAACCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp TTGGTCCTCTGGTTAGTGTTATTCAAATGCATCCAGGAACTGATAAAACTTCTCCCTCCGAGCACCTCCTaGAGGAGGGCGGCCGCGGAC +
Preference number: 4 (lower is better)
Translates to: LVLWLVLFKCIQELIKLLPPSTS*RRAAAD
Trigger: GTCCGCGGCCGCCCTCCTGCAGGAGGTGCTCGGAGG...GAGAAGTTTTATCAGTTCCTGGATGCATTTGAATAACACTAACCAGAGGACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp TTGTTCAGACCTCGAGGAATCTTTCAAGAGATTTTGGAGGCTTGGATAACTCTTAGACCCCGCGCGCTCTaGGCTTCACGGGTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: LFRPRGIFQEILEAWITLRPRAL*ASRVAR
Trigger: CCGAGCCACCCGTGAAGCGCAGAGCGCGCGGGGTCT...AAGAGTTATCCAAGCCTCCAAAATCTCTTGAAAGATTCCTCGAGGTCTGAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp GAACTCAGTGATCCAAATGTTGAAGGATTTACCACCACAATTGCCAGAAATAGCGCAGGACCACGGGTCTaGCCGTGCCGAACCCCGAGG +
Preference number: 4 (lower is better)
Translates to: ELSDPNVEGFTTTIARNSAGPRV*PCRTPR
Trigger: CCTCGGGGTTCGGCACGGCCAGACCCGTGGTCCTGC...GCTATTTCTGGCAATTGTGGTGGTAAATCCTTCAACATTTGGATCACTGAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACCCTCCGAGCACCTCCTaGAGGAGGGCGGCCGCGGAC +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYPPSTS*RRAAAD
Trigger: GTCCGCGGCCGCCCTCCTGCAGGAGGTGCTCGGAGG...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR GCA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTAGACCCCGCGCGCTCTaGGCTTCACGGGTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSRPRAL*ASRVAR
Trigger: CCGAGCCACCCGTGAAGCGCAGAGCGCGCGGGGTCT...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCGACCGGGTCTTGCCTaGAGCCGCCGCCTCACCCAG +
Preference number: 4 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSRPGLA*SRRLTQ
Trigger: CTGGGTGAGGCGGCGGCTCCAGGCAAGACCCGGTCG...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp TTGGTCCTCTGGTTAGTGTTATTCAAATGCATCCAGGAACTGATAAAACTTCTCAGTGGAAGACCCGCCTaGGAGCCGCGTGCCGCGAGC +
Preference number: 4 (lower is better)
Translates to: LVLWLVLFKCIQELIKLLSGRPA*EPRAAS
Trigger: GCTCGCGGCACGCGGCTCCCAGGCGGGTCTTCCACT...GAGAAGTTTTATCAGTTCCTGGATGCATTTGAATAACACTAACCAGAGGACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp TTGGTCCTCTGGTTAGTGTTATTCAAATGCATCCAGGAACTGATAAAACTTCTCCCTCCCGCGCGTCGCTaGGCGGCCAGCTCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: LVLWLVLFKCIQELIKLLPPARR*AASSPV
Trigger: AACAGGAGAGCTGGCCGCCCAGCGACGCGCGGGAGG...GAGAAGTTTTATCAGTTCCTGGATGCATTTGAATAACACTAACCAGAGGACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR TCA 90 bp AAACAACTTCGTGAATTCTGGATAAGCATACATTTCCTCTCCCAAGACTTCCAACAATTCAGGTGGCGGTaGGCTTGGCCCCGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: KQLREFWISIHFLSQDFQQFRWR*AWPRRS
Trigger: CGAGCGGCGGGGCCAAGCTCACCGCCACCTGAATTG...TTGGAAGTCTTGGGAGAGGAAATGTATGCTTATCCAGAATTCACGAAGTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR TCA 90 bp AGCAATTCTGAGGTTCTCATCTTCATTAAACCTATGGCTGGAGATGGACGGCGGACTGCAGAGAGGCGATaGTCTCTTCGATGGACGTGG +
Preference number: 4 (lower is better)
Translates to: SNSEVLIFIKPMAGDGRRTAERR*SLRWTW
Trigger: CCACGTCCATCGAAGAGATCATCGCCTCTCTGCAGT...CCGCCGTCCATCTCCAGCCATAGGTTTAATGAAGATGAGAACCTCAGAATTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR TCA 90 bp AGCAGTGTGATACACTCGAGAAGCCAGGCGCAAGTCAACAGGCAGCTCCTGGGCATAGAGTTTCCTTCATaGCAGATTCTGGAACAGAGA +
Preference number: 4 (lower is better)
Translates to: SSVIHSRSQAQVNRQLLGIEFPS*QILEQR
Trigger: TCTCTGTTCCAGAATCTGTCATGAAGGAAACTCTAT...GCCCAGGAGCTGCCTGTTGACTTGCGCCTGGCTTCTCGAGTGTATCACACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp GAATTCTGGATAAGCATACATTTCCTCTCCCAAGACTTCCAAGTGTGGTTTGTGAACAGGCCTTTCCTGTaGCTAGGGGCCGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: EFWISIHFLSQDFQVWFVNRPFL*LGAGWA
Trigger: AGCCCACCCGGCCCCTAGGCACAGGAAAGGCCTGTT...CACAAACCACACTTGGAAGTCTTGGGAGAGGAAATGTATGCTTATCCAGAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTCTCGACGTCCGGGCTaGGGCGCAGGAAACGCGCGC +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYSRRPG*GAGNAR
Trigger: GCGCGCGTTTCCTGCGCCGCAGCCCGGACGTCGAGA...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGCAGGACCACGGGTCTaGCCGTGCCGAACCCCGAGG +
Preference number: 4 (lower is better)
Translates to: MVEPFRQQICFRFRENSCAGPRV*PCRTPR
Trigger: CCTCGGGGTTCGGCACGGCCAGACCCGTGGTCCTGC...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp ATTCCAAAACAACTTCGTGAATTCTGGATAAGCATACATTTCCTCTCCCAAGACTCTGCGCTTCACGGGTaGCTCGGGCGGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: IPKQLREFWISIHFLSQDSALHG*LGRRQQ
Trigger: CTGCTGCCTCCGCCCGAGCCACCCGTGAAGCGCAGA...GTCTTGGGAGAGGAAATGTATGCTTATCCAGAATTCACGAAGTTGTTTTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTAGTGGAAGACCCGCCTaGGAGCCGCGTGCCGCGAGC +
Preference number: 4 (lower is better)
Translates to: MVEPFRQQICFRFRENSCSGRPA*EPRAAS
Trigger: GCTCGCGGCACGCGGCTCCCAGGCGGGTCTTCCACT...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp TTGTTCAGACCTCGAGGAATCTTTCAAGAGATTTTGGAGGCTTGGATAACTCTTTCCTCCGCCCGCTGCTaGCCTCCATGTAGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: LFRPRGIFQEILEAWITLSSARC*PPCSRP
Trigger: AGGACGGCTACATGGAGGCCAGCAGCGGGCGGAGGA...AAGAGTTATCCAAGCCTCCAAAATCTCTTGAAAGATTCCTCGAGGTCTGAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTCCTCCCGCGCGTCGCTaGGCGGCCAGCTCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: MVEPFRQQICFRFRENSCPPARR*AASSPV
Trigger: AACAGGAGAGCTGGCCGCCCAGCGACGCGCGGGAGG...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp ACCTCGAGGAATCTTTCAAGAGATTTTGGAGGCTTGGATAACTCTTCATGCACGTCTCTTCGATGGACGTaGGGATCACGCGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: TSRNLSRDFGGLDNSSCTSLRWT*GSRGRA
Trigger: TGCCCTCCCGCGTGATCCCCACGTCCATCGAAGAGA...CGTGCATGAAGAGTTATCCAAGCCTCCAAAATCTCTTGAAAGATTCCTCGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTTGGTCGGAGGCCAGCTaGGCCTCGGACTGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCWSEAS*ASDCRE
Trigger: CTCTCTGCAGTCCGAGGCCCAGCTGGCCTCCGACCA...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp AGCAGTGTGATACACTCGAGAAGCCAGGCGCAAGTCAACAGGCAGCTCCTGGGCCGAAGATGTTCTTACTaGTCAACTTGCAGTAGAACA +
Preference number: 4 (lower is better)
Translates to: SSVIHSRSQAQVNRQLLGRRCSY*STCSRT
Trigger: TGTTCTACTGCAAGTTGACCAGTAAGAACATCTTCG...GCCCAGGAGCTGCCTGTTGACTTGCGCCTGGCTTCTCGAGTGTATCACACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp GTGTGGTTTGTGAGCACGCTCTCTAGTTCCTTGTGCCAATTCAGGTGGTATCCCTCTTCATTAAACCTATaGCTGGAGATGGACGGCGGC +
Preference number: 4 (lower is better)
Translates to: VWFVSTLSSSLCQFRWYPSSLNL*LEMDGG
Trigger: GCCGCCGTCCATCTCCAGCCATAGGTTTAATGAAGA...GGGATACCACCTGAATTGGCACAAGGAACTAGAGAGCGTGCTCACAAACCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR TCA 90 bp ATCTTCATTAAACCTATGGCTGGAGATGGACGGCGGCCTTCCTATCCAGTAGAGTTCCTGTTAGCAGTGTaGTACACTCGAGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: IFIKPMAGDGRRPSYPVEFLLAV*YTREAR
Trigger: CCTGGCTTCTCGAGTGTATCACACTGCTAACAGGAA...CTCTACTGGATAGGAAGGCCGCCGTCCATCTCCAGCCATAGGTTTAATGAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR TCA 90 bp ATCTTCATTAAACCTATGGCTGGAGATGGACGGCGGCCTTCCTATCCAGTAGAGTCCAAGTGTGGTTTGTaGGCACGCTCTCTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: IFIKPMAGDGRRPSYPVESKCGL*ARSLVP
Trigger: AGGAACTAGAGAGCGTGCTCACAAACCACACTTGGA...CTCTACTGGATAGGAAGGCCGCCGTCCATCTCCAGCCATAGGTTTAATGAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp ATTCCAAAACAACTTCGTGAATTCTGGATAAGCATACATTTCCTCTCCCAAGACGAAACGACCGGGTCTTaGCTGGAGCCGCCGCCTCAC +
Preference number: 4 (lower is better)
Translates to: IPKQLREFWISIHFLSQDETTGS*LEPPPH
Trigger: GTGAGGCGGCGGCTCCAGGCAAGACCCGGTCGTTTC...GTCTTGGGAGAGGAAATGTATGCTTATCCAGAATTCACGAAGTTGTTTTGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp AGCAGTGTGATACACTCGAGAAGCCAGGCGCAAGTCAACAGGCAGCTCCTGGGCCTGGAATTTATACTCTaGTTGTATCTCAGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: SSVIHSRSQAQVNRQLLGLEFIL*LYLRCF
Trigger: GAAACACCTGAGATACAAGCAGAGTATAAATTCCAG...GCCCAGGAGCTGCCTGTTGACTTGCGCCTGGCTTCTCGAGTGTATCACACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp ACCTCGAGGAATCTTTCAAGAGATTTTGGAGGCTTGGATAACTCTTCATGCACGGGGCTGGGATGGTGGTaGACAGATCATGAAGGTGCG +
Preference number: 4 (lower is better)
Translates to: TSRNLSRDFGGLDNSSCTGLGWW*TDHEGA
Trigger: CGCACCTTCATGATCTGTGCACCACCATCCCAGCCC...CGTGCATGAAGAGTTATCCAAGCCTCCAAAATCTCTTGAAAGATTCCTCGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp TTCAGAGGTAGAAGATTTCAGGGACAGAGCAATGTCAACAGGAACCCAAGATTTGGCTTTTTCAGGGCCTaGTGCCGTAGGAACGCGGAG +
Preference number: 4 (lower is better)
Translates to: FRGRRFQGQSNVNRNPRFGFFRA*CRRNAE
Trigger: CTCCGCGTTCCTACGGCACCAGGCCCTGAAAAAGCC...AAATCTTGGGTTCCTGTTGACATTGCTCTGTCCCTGAAATCTTCTACCTCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTTCTGCGCTTCACGGGTaGCTCGGGCGGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: MVEPFRQQICFRFRENSCSALHG*LGRRQQ
Trigger: CTGCTGCCTCCGCCCGAGCCACCCGTGAAGCGCAGA...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp ATTCCAAAACAACTTCGTGAATTCTGGATAAGCATACATTTCCTCTCCCAAGACTGGTCGGAGGCCAGCTaGGCCTCGGACTGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: IPKQLREFWISIHFLSQDWSEAS*ASDCRE
Trigger: CTCTCTGCAGTCCGAGGCCCAGCTGGCCTCCGACCA...GTCTTGGGAGAGGAAATGTATGCTTATCCAGAATTCACGAAGTTGTTTTGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp AGCAATTCTGAGGTTCTCATCTTCATTAAACCTATGGCTGGAGATGGACGGCGGCCAAGCAGGGTATCGTaGCCTTTCCTGTTAGCAGTG +
Preference number: 4 (lower is better)
Translates to: SNSEVLIFIKPMAGDGRRPSRVS*PFLLAV
Trigger: CACTGCTAACAGGAAAGGCCACGATACCCTGCTTGG...CCGCCGTCCATCTCCAGCCATAGGTTTAATGAAGATGAGAACCTCAGAATTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp AGCAATTCTGAGGTTCTCATCTTCATTAAACCTATGGCTGGAGATGGACGGCGGTTGTGCCAATTCAGGTaGTATCCCTTGCGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: SNSEVLIFIKPMAGDGRRLCQFR*YPLRCR
Trigger: CCGACACCGCAAGGGATACCACCTGAATTGGCACAA...CCGCCGTCCATCTCCAGCCATAGGTTTAATGAAGATGAGAACCTCAGAATTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACGAAACGACCGGGTCTTaGCTGGAGCCGCCGCCTCAC +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYETTGS*LEPPPH
Trigger: GTGAGGCGGCGGCTCCAGGCAAGACCCGGTCGTTTC...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR GCA 90 bp GAATTCTGGATAAGCATACATTTCCTCTCCCAAGACTTCCAAGTGTGGTTTGTGTTTTTCAGGGCCTGGTaGCGTAGGAACGCGGAGCTC +
Preference number: 4 (lower is better)
Translates to: EFWISIHFLSQDFQVWFVFFRAW*RRNAEL
Trigger: GAGCTCCGCGTTCCTACGGCACCAGGCCCTGAAAAA...CACAAACCACACTTGGAAGTCTTGGGAGAGGAAATGTATGCTTATCCAGAATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp AGTGATCCAAATGTTGAAGGATTTACCACCACAATTGCCAGAAATAGCATCTCACTTTCCTCCGCCCGCTaGTGGCCTCCATGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: SDPNVEGFTTTIARNSISLSSAR*WPPCSR
Trigger: ACGGCTACATGGAGGCCAGCAGCGGGCGGAGGAAAG...TGAGATGCTATTTCTGGCAATTGTGGTGGTAAATCCTTCAACATTTGGATCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTTTCCTCCGCCCGCTaGTGGCCTCCATGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSLSSAR*WPPCSR
Trigger: ACGGCTACATGGAGGCCAGCAGCGGGCGGAGGAAAG...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACCGCTCCCTTCCCAAGTaGAAGACCCGCCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYRSLPK*KTRLGA
Trigger: GGCTCCCAGGCGGGTCTTCCACTTGGGAAGGGAGCG...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTCTGCGGAGACGGAGCTaGCCTTCCTCTCTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCLRRRS*PSSLWP
Trigger: TGGCCAAAGAGAGGAAGGCCAGCTCCGTCTCCGCAG...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTCCTCCGCCCGCTGCTaGCCTCCATGTAGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYSSARC*PPCSRP
Trigger: AGGACGGCTACATGGAGGCCAGCAGCGGGCGGAGGA...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp GAACTCAGTGATCCAAATGTTGAAGGATTTACCACCACAATTGCCAGAAATAGCAGCTCTTTGATGGTCTaGTCGGAGGCCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ELSDPNVEGFTTTIARNSSSLMV*SEASWA
Trigger: GGCCCAGCTGGCCTCCGACCAGACCATCAAAGAGCT...GCTATTTCTGGCAATTGTGGTGGTAAATCCTTCAACATTTGGATCACTGAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTAGCTCTTTGATGGTCTaGTCGGAGGCCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCSSLMV*SEASWA
Trigger: GGCCCAGCTGGCCTCCGACCAGACCATCAAAGAGCT...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp CGATCATCTAAGAAAGAGGTTCCAAATTTTCCAAGCAGGGTATCGTGGCCTTTCCCTGGGCTGGGATGGTaGTGCACAGATCATGAAGGT +
Preference number: 4 (lower is better)
Translates to: RSSKKEVPNFPSRVSWPFPGLGW*CTDHEG
Trigger: ACCTTCATGATCTGTGCACCACCATCCCAGCCCAGG...GAAAGGCCACGATACCCTGCTTGGAAAATTTGGAACCTCTTTCTTAGATGATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR TCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTCACATGGCAGTGGCGTaGCAAAGGCTCCCGTTAGTC +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCHMAVA*QRLPLV
Trigger: GACTAACGGGAGCCTTTGTCACGCCACTGCCATGTG...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR GCA 90 bp GAATTCTGGATAAGCATACATTTCCTCTCCCAAGACTTCCAAGTGTGGTTTGTGCGCTCACGAAGTTGCTaGGGATCCTCACTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: EFWISIHFLSQDFQVWFVRSRSC*GSSLSS
Trigger: GGAGGAAAGTGAGGATCCGCAGCAACTTCGTGAGCG...CACAAACCACACTTGGAAGTCTTGGGAGAGGAAATGTATGCTTATCCAGAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp CGAGGAATCTTTCAAGAGATTTTGGAGGCTTGGATAACTCTTCATGCACGAATAAGCTGGGCCTCGGACTaGAGAGAGGCGATGATCTCT +
Preference number: 4 (lower is better)
Translates to: RGIFQEILEAWITLHARISWASD*REAMIS
Trigger: AGAGATCATCGCCTCTCTGCAGTCCGAGGCCCAGCT...TATTCGTGCATGAAGAGTTATCCAAGCCTCCAAAATCTCTTGAAAGATTCCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp CGATCATCTAAGAAAGAGGTTCCAAATTTTCCAAGCAGGGTATCGTGGCCTTTCTCAGGTGGTATCCCTTaGGGTGTCGGAGGAATATGG +
Preference number: 4 (lower is better)
Translates to: RSSKKEVPNFPSRVSWPFSGGIP*GVGGIW
Trigger: CCATATTCCTCCGACACCGCAAGGGATACCACCTGA...GAAAGGCCACGATACCCTGCTTGGAAAATTTGGAACCTCTTTCTTAGATGATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTGATGGCACATGGCAGTaGCGTGACAAAGGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCDGTWQ*RDKGSR
Trigger: ACGGGAGCCTTTGTCACGCCACTGCCATGTGCCATC...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR CCA 90 bp TTCAGAGGTAGAAGATTTCAGGGACAGAGCAATGTCAACAGGAACCCAAGATTTGGGGCATGGAGGCTGTaGACTGGGCTTTCATCTACA +
Preference number: 4 (lower is better)
Translates to: FRGRRFQGQSNVNRNPRFGAWRL*TGLSST
Trigger: TGTAGATGAAAGCCCAGTCCACAGCCTCCATGCCCC...AAATCTTGGGTTCCTGTTGACATTGCTCTGTCCCTGAAATCTTCTACCTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp ATCTTCATTAAACCTATGGCTGGAGATGGACGGCGGCCTTCCTATCCAGTAGAGCATGAAGGTGCGGCATaGAGTAGTCTTGTGGAATTT +
Preference number: 4 (lower is better)
Translates to: IFIKPMAGDGRRPSYPVEHEGAA*SSLVEF
Trigger: AAATTCCACAAGACTACTCCATGCCGCACCTTCATG...CTCTACTGGATAGGAAGGCCGCCGTCCATCTCCAGCCATAGGTTTAATGAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTTCAACAGGCAGCTCCTaGGCTGGGATGGTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSSTGSS*AGMVVH
Trigger: GTGCACCACCATCCCAGCCCAGGAGCTGCCTGTTGA...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR TCA 90 bp AGCAATTCTGAGGTTCTCATCTTCATTAAACCTATGGCTGGAGATGGACGGCGGTTAGTGAGCTGGAGCTaGCGTTTCAATTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: SNSEVLIFIKPMAGDGRRLVSWS*RFNSFA
Trigger: AGCAAAGGAATTGAAACGTCAGCTCCAGCTCACTAA...CCGCCGTCCATCTCCAGCCATAGGTTTAATGAAGATGAGAACCTCAGAATTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp TTTATTTTGCTTAGTGAGCTGGAGCTGACGTTTCAATTCCTTTGCTTTCTGAAATCCTCTCTTTGGCCATaGAGGGCCCTGCGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: FILLSELELTFQFLCFLKSSLWP*RALREE
Trigger: CTCCTCTCGCAGGGCCCTGCATGGCCAAAGAGAGGA...TTTCAGAAAGCAAAGGAATTGAAACGTCAGCTCCAGCTCACTAAGCAAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTTCCTCTCTTTGGCCATaGAGGGCCCTGCGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: MVEPFRQQICFRFRENSCSSLWP*RALREE
Trigger: CTCCTCTCGCAGGGCCCTGCATGGCCAAAGAGAGGA...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR GCA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTGGGCTGGGATGGTGGTaGACAGATCATGAAGGTGCG +
Preference number: 4 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSGLGWW*TDHEGA
Trigger: CGCACCTTCATGATCTGTGCACCACCATCCCAGCCC...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTGGGGCATGGAGGCTGTaGACTGGGCTTTCATCTACA +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCGAWRL*TGLSST
Trigger: TGTAGATGAAAGCCCAGTCCACAGCCTCCATGCCCC...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGGCTTTTTCAGGGCCTaGTGCCGTAGGAACGCGGAG +
Preference number: 4 (lower is better)
Translates to: MVEPFRQQICFRFRENSCGFFRA*CRRNAE
Trigger: CTCCGCGTTCCTACGGCACCAGGCCCTGAAAAAGCC...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTCTCTTCGATGGACGTaGGGATCACGCGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYSLRWT*GSRGRA
Trigger: TGCCCTCCCGCGTGATCCCCACGTCCATCGAAGAGA...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTCCTGGGCTGGGATGGTaGTGCACAGATCATGAAGGT +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCPGLGW*CTDHEG
Trigger: ACCTTCATGATCTGTGCACCACCATCCCAGCCCAGG...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp CGAGGAATCTTTCAAGAGATTTTGGAGGCTTGGATAACTCTTCATGCACGAATAGCTCCTGGGCTGGGATaGTGGTGCACAGATCATGAA +
Preference number: 4 (lower is better)
Translates to: RGIFQEILEAWITLHARIAPGLG*WCTDHE
Trigger: TTCATGATCTGTGCACCACCATCCCAGCCCAGGAGC...TATTCGTGCATGAAGAGTTATCCAAGCCTCCAAAATCTCTTGAAAGATTCCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACAGGCAGCTCCTGGGCTaGGATGGTGGTGCACAGATC +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYRQLLG*DGGAQI
Trigger: GATCTGTGCACCACCATCCCAGCCCAGGAGCTGCCT...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp ATTCCAAAACAACTTCGTGAATTCTGGATAAGCATACATTTCCTCTCCCAAGACACCTATGGCTGGAGATaGACGGCGGCCTTCCTATCC +
Preference number: 4 (lower is better)
Translates to: IPKQLREFWISIHFLSQDTYGWR*TAAFLS
Trigger: GGATAGGAAGGCCGCCGTCCATCTCCAGCCATAGGT...GTCTTGGGAGAGGAAATGTATGCTTATCCAGAATTCACGAAGTTGTTTTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR CAA 72 bp CTCTCTAGTTCCTTGTGCCAATTCAGGTGGTATCCCTaGCGGTGTCGGAGGAATATGGACATATTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: LSSSLCQFRWYP*RCRRNMDIFLV
Trigger: AACCAAGAATATGTCCATATTCCTCCGACACCGCAAGGGATACCACCTGAATTGGCACAAGGAACTAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR TCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACCACATGGCAGTGGCGTaGCAAAGGCTCCCGTTAGTC +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYHMAVA*QRLPLV
Trigger: GACTAACGGGAGCCTTTGTCACGCCACTGCCATGTG...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR TCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTTGGATTCCATCTGGCTaGAGGTGGATAGCACGAGAC +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCWIPSG*RWIARD
Trigger: GTCTCGTGCTATCCACCTTCAGCCAGATGGAATCCA...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR TCA 90 bp ATCTTCATTAAACCTATGGCTGGAGATGGACGGCGGCCTTCCTATCCAGTAGAGATCACAAAGAGGTTTTaGAGACTTTCTTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: IFIKPMAGDGRRPSYPVEITKRF*RLSWSQ
Trigger: CTGAGACCAAGAAAGTCTTCAAAACCTCTTTGTGAT...CTCTACTGGATAGGAAGGCCGCCGTCCATCTCCAGCCATAGGTTTAATGAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR TCA 90 bp GTGTGGTTTGTGAGCACGCTCTCTAGTTCCTTGTGCCAATTCAGGTGGTATCCCAAAAGTCTGCTTGCTTaGACACTCTCATATTTTGGA +
Preference number: 4 (lower is better)
Translates to: VWFVSTLSSSLCQFRWYPKSLLA*TLSYFG
Trigger: TCCAAAATATGAGAGTGTTCAAGCAAGCAGACTTTT...GGGATACCACCTGAATTGGCACAAGGAACTAGAGAGCGTGCTCACAAACCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTTTTTTCAGGGCCTGGTaGCGTAGGAACGCGGAGCTC +
Preference number: 4 (lower is better)
Translates to: MVEPFRQQICFRFRENSCFFRAW*RRNAEL
Trigger: GAGCTCCGCGTTCCTACGGCACCAGGCCCTGAAAAA...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR GCA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCGCTCACGAAGTTGCTaGGGATCCTCACTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSRSRSC*GSSLSS
Trigger: GGAGGAAAGTGAGGATCCGCAGCAACTTCGTGAGCG...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR GCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACAGCTGGGCCTCGGACTaGAGAGAGGCGATGATCTCT +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYSWASD*REAMIS
Trigger: AGAGATCATCGCCTCTCTGCAGTCCGAGGCCCAGCT...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR GCA 90 bp TCAGTGGTTCTTGTTCAGACCTCGAGGAATCTTTCAAGAGATTTTGGAGGCTTGCTCTCTAGTTCCTTGTaGCAATTCAGGTGGTATCCC +
Preference number: 4 (lower is better)
Translates to: SVVLVQTSRNLSRDFGGLLSSSL*QFRWYP
Trigger: GGGATACCACCTGAATTGGCACAAGGAACTAGAGAG...CAAGCCTCCAAAATCTCTTGAAAGATTCCTCGAGGTCTGAACAAGAACCACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp AGCAATTCTGAGGTTCTCATCTTCATTAAACCTATGGCTGGAGATGGACGGCGGCTTTCTCATTTGTTCTaGCTTGGTAGCAAGATGGCT +
Preference number: 4 (lower is better)
Translates to: SNSEVLIFIKPMAGDGRRLSHLF*LGSKMA
Trigger: AGCCATCTTGCTACCAAGGCAGAACAAATGAGAAAG...CCGCCGTCCATCTCCAGCCATAGGTTTAATGAAGATGAGAACCTCAGAATTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp TTCAAAGACAGGGCTTTATTAAGGTCTTCCTCAGCTAGTTCATATTGCTTTAAGGATGGCACATGGCAGTaGCGTGACAAAGGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: FKDRALLRSSSASSYCFKDGTWQ*RDKGSR
Trigger: ACGGGAGCCTTTGTCACGCCACTGCCATGTGCCATC...CTTAAAGCAATATGAACTAGCTGAGGAAGACCTTAATAAAGCCCTGTCTTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478811.6
CDS-3UTR CCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTTTCTGTGATGGCACATaGCAGTGGCGTGACAAAGGC +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCFCDGT*QWRDKG
Trigger: GCCTTTGTCACGCCACTGCCATGTGCCATCACAGAA...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR CCA 90 bp CTCATAACAAGAAATTCAGAGGTAGAAGATTTCAGGGACAGAGCAATGTCAACAATGGAGGCTGTGGACTaGGCTTTCATCTACAGCCGG +
Preference number: 4 (lower is better)
Translates to: LITRNSEVEDFRDRAMSTMEAVD*AFIYSR
Trigger: CCGGCTGTAGATGAAAGCCCAGTCCACAGCCTCCAT...TGTTGACATTGCTCTGTCCCTGAAATCTTCTACCTCTGAATTTCTTGTTATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTAGAGGAGCTACCTCCTaGCTCTGTTCGCGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: MVEPFRQQICFRFRENSCRGATS*LCSRSL
Trigger: AAGGGAGCGCGAACAGAGCCAGGAGGTAGCTCCTCT...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTGCTCCTGGGCTGGGATaGTGGTGCACAGATCATGAA +
Preference number: 4 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSAPGLG*WCTDHE
Trigger: TTCATGATCTGTGCACCACCATCCCAGCCCAGGAGC...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTCCAAGCAGGGTATCGTaGCCTTTCCTGTTAGCAGTG +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCPSRVS*PFLLAV
Trigger: CACTGCTAACAGGAAAGGCCACGATACCCTGCTTGG...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR TCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTCAGCTCTATTCCAGCTaGTTCCGTCCAAGACCTCAA +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCQLYSS*FRPRPQ
Trigger: TTGAGGTCTTGGACGGAATCAGCTGGAATAGAGCTG...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR TCA 90 bp TTAGGCTTCAAAGACAGGGCTTTATTAAGGTCTTCCTCAGCTAGTTCATATTGCCAGCTCTATTCCAGCTaGTTCCGTCCAAGACCTCAA +
Preference number: 4 (lower is better)
Translates to: LGFKDRALLRSSSASSYCQLYSS*FRPRPQ
Trigger: TTGAGGTCTTGGACGGAATCAGCTGGAATAGAGCTG...GCAATATGAACTAGCTGAGGAAGACCTTAATAAAGCCCTGTCTTTGAAGCCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478811.6
CDS-3UTR TCA 90 bp CTGTTTAATACATTGTCAGCAAGGATTGATGAAAAGGTCAGTGACACTTTTTCTCACATGGCAGTGGCGTaGCAAAGGCTCCCGTTAGTC +
Preference number: 4 (lower is better)
Translates to: LFNTLSARIDEKVSDTFSHMAVA*QRLPLV
Trigger: GACTAACGGGAGCCTTTGTCACGCCACTGCCATGTG...AGAAAAAGTGTCACTGACCTTTTCATCAATCCTTGCTGACAATGTATTAAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476979.5
CDS-3UTR TCA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTACTGCAGAGAGGCGATaGTCTCTTCGATGGACGTGG +
Preference number: 4 (lower is better)
Translates to: MVEPFRQQICFRFRENSCTAERR*SLRWTW
Trigger: CCACGTCCATCGAAGAGATCATCGCCTCTCTGCAGT...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR TCA 90 bp ATCTTCATTAAACCTATGGCTGGAGATGGACGGCGGCCTTCCTATCCAGTAGAGAATCTGGAGAATACTTaGCATGGTTTCAGAAAGTTC +
Preference number: 4 (lower is better)
Translates to: IFIKPMAGDGRRPSYPVENLENT*HGFRKF
Trigger: GAACTTTCTGAAACCATGTCAAGTATTCTCCAGATT...CTCTACTGGATAGGAAGGCCGCCGTCCATCTCCAGCCATAGGTTTAATGAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR TCA 90 bp CGATCATCTAAGAAAGAGGTTCCAAATTTTCCAAGCAGGGTATCGTGGCCTTTCTATGCTTTCTGCTTCTaGGGGTCCCCATTCTATATC +
Preference number: 4 (lower is better)
Translates to: RSSKKEVPNFPSRVSWPFYAFCF*GSPFYI
Trigger: GATATAGAATGGGGACCCTCAGAAGCAGAAAGCATA...GAAAGGCCACGATACCCTGCTTGGAAAATTTGGAACCTCTTTCTTAGATGATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp TTCAGAGGTAGAAGATTTCAGGGACAGAGCAATGTCAACAGGAACCCAAGATTTTTATGCACGCTCATTTaGGATTCCTCAGCACCCATC +
Preference number: 4 (lower is better)
Translates to: FRGRRFQGQSNVNRNPRFLCTLI*DSSAPI
Trigger: GATGGGTGCTGAGGAATCGCAAATGAGCGTGCATAA...AAATCTTGGGTTCCTGTTGACATTGCTCTGTCCCTGAAATCTTCTACCTCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp GTGTGGTTTGTGAGCACGCTCTCTAGTTCCTTGTGCCAATTCAGGTGGTATCCCACGTTTCAATTCCTTTaGTTTCTGAAACATAACCTC +
Preference number: 4 (lower is better)
Translates to: VWFVSTLSSSLCQFRWYPTFQFL*FLKHNL
Trigger: GAGGTTATGTTTCAGAAAGCAAAGGAATTGAAACGT...GGGATACCACCTGAATTGGCACAAGGAACTAGAGAGCGTGCTCACAAACCACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp ATCTGTATACTGTTTAATACATTGTCAGCAAGGATTGATGAAAAGGTCAGTGACGATGGCACATGGCAGTaGCGTGACAAAGGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: ICILFNTLSARIDEKVSDDGTWQ*RDKGSR
Trigger: ACGGGAGCCTTTGTCACGCCACTGCCATGTGCCATC...GTCACTGACCTTTTCATCAATCCTTGCTGACAATGTATTAAACAGTATACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476979.5
CDS-3UTR CCA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTTTCTGTGATGGCACATaGCAGTGGCGTGACAAAGGC +
Preference number: 4 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSFCDGT*QWRDKG
Trigger: GCCTTTGTCACGCCACTGCCATGTGCCATCACAGAA...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR CCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACATGGAGGCTGTGGACTaGGCTTTCATCTACAGCCGG +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYMEAVD*AFIYSR
Trigger: CCGGCTGTAGATGAAAGCCCAGTCCACAGCCTCCAT...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR TCA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCAGCTCTATTCCAGCTaGTTCCGTCCAAGACCTCAA +
Preference number: 4 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSQLYSS*FRPRPQ
Trigger: TTGAGGTCTTGGACGGAATCAGCTGGAATAGAGCTG...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR TCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTATACAGACAGTCTGCTaGAATTGCTGTGGCATCTGG +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCIQTVC*NCCGIW
Trigger: CCAGATGCCACAGCAATTTCAGCAGACTGTCTGTAT...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR TCA 90 bp TTAGGCTTCAAAGACAGGGCTTTATTAAGGTCTTCCTCAGCTAGTTCATATTGCATACAGACAGTCTGCTaGAATTGCTGTGGCATCTGG +
Preference number: 4 (lower is better)
Translates to: LGFKDRALLRSSSASSYCIQTVC*NCCGIW
Trigger: CCAGATGCCACAGCAATTTCAGCAGACTGTCTGTAT...GCAATATGAACTAGCTGAGGAAGACCTTAATAAAGCCCTGTCTTTGAAGCCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478811.6
CDS-3UTR TCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTAACTCATTAATTCTGTaGTGGCACATGGCAGTGGCG +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCNSLIL*WHMAVA
Trigger: CGCCACTGCCATGTGCCATCACAGAATTAATGAGTT...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR TCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTGGATTCCATCTGGCTaGAGGTGGATAGCACGAGAC +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYWIPSG*RWIARD
Trigger: GTCTCGTGCTATCCACCTTCAGCCAGATGGAATCCA...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR TCA 90 bp AGAGAATTTAGGTGCAGCTGTATTCCAAAACAACTTCGTGAATTCTGGATAAGCCCACTTGGCTTCTTTTaGATCACTTGTGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: REFRCSCIPKQLREFWISPLGFF*ITCGLS
Trigger: GGACAGCCCACAAGTGATTCAAAAGAAGCCAAGTGG...GCTTATCCAGAATTCACGAAGTTGTTTTGGAATACAGCTGCACCTAAATTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR TCA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCCACTTGGCTTCTTTTaGATCACTTGTGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSPLGFF*ITCGLS
Trigger: GGACAGCCCACAAGTGATTCAAAAGAAGCCAAGTGG...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR TCA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTTCCAAGTGTGGTTTGTaGGCACGCTCTCTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSSKCGL*ARSLVP
Trigger: AGGAACTAGAGAGCGTGCTCACAAACCACACTTGGA...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR GCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACCTCCCACCTGCATACTaGACTTTTCCGACGGGCTTA +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYLPPAY*TFPTGL
Trigger: TAAGCCCGTCGGAAAAGTGCAGTATGCAGGTGGGAG...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476979.5
CDS-3UTR GCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTCTCGCTCACGAAGTTaGTGCGGATCCTCACTTTCC +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYSRSRS*CGSSLS
Trigger: GGAAAGTGAGGATCCGCAGCAACTTCGTGAGCGAGA...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR GCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTTTATGCACGCTCATTTaGGATTCCTCAGCACCCATC +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCLCTLI*DSSAPI
Trigger: GATGGGTGCTGAGGAATCGCAAATGAGCGTGCATAA...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR GCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTCAGGTGGTATCCCTTaGGGTGTCGGAGGAATATGG +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYSGGIP*GVGGIW
Trigger: CCATATTCCTCCGACACCGCAAGGGATACCACCTGA...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTCGTCCAAGACCTCAATaGCCTTGTCATGGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCRPRPQ*PCHGFH
Trigger: GTGAAAACCATGACAAGGCCATTGAGGTCTTGGACG...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR CCA 90 bp TTAGGCTTCAAAGACAGGGCTTTATTAAGGTCTTCCTCAGCTAGTTCATATTGCCGTCCAAGACCTCAATaGCCTTGTCATGGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: LGFKDRALLRSSSASSYCRPRPQ*PCHGFH
Trigger: GTGAAAACCATGACAAGGCCATTGAGGTCTTGGACG...GCAATATGAACTAGCTGAGGAAGACCTTAATAAAGCCCTGTCTTTGAAGCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478811.6
CDS-3UTR CCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTCTTTCTGTGCTTGCTTaGTGGCTTCATCATGACCGT +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCLSVLA*WLHHDR
Trigger: ACGGTCATGATGAAGCCACCAAGCAAGCACAGAAAG...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR CCA 90 bp TTAGGCTTCAAAGACAGGGCTTTATTAAGGTCTTCCTCAGCTAGTTCATATTGCCTTTCTGTGCTTGCTTaGTGGCTTCATCATGACCGT +
Preference number: 4 (lower is better)
Translates to: LGFKDRALLRSSSASSYCLSVLA*WLHHDR
Trigger: ACGGTCATGATGAAGCCACCAAGCAAGCACAGAAAG...GCAATATGAACTAGCTGAGGAAGACCTTAATAAAGCCCTGTCTTTGAAGCCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478811.6
CDS-3UTR CCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTTGTGCCAATTCAGGTaGTATCCCTTGCGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYLCQFR*YPLRCR
Trigger: CCGACACCGCAAGGGATACCACCTGAATTGGCACAA...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
3UTR CAA 72 bp AACGCTTCTAGTTTTCACGTTCTGCGTCAGTGGTTCTaGTTCAGACCTCGAGGAATCTTTCAAGAGATTTTG +
Preference number: 4 (lower is better)
Translates to: NASSFHVLRQWF*FRPRGIFQEIL
Trigger: CAAAATCTCTTGAAAGATTCCTCGAGGTCTGAACAAGAACCACTGACGCAGAACGTGAAAACTAGAAGCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR TCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTTGGCCCATAAACTCATaGATCACCCCACGATTTGTT +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCWPINS*ITPRFV
Trigger: AACAAATCGTGGGGTGATTCATGAGTTTATGGGCCA...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR TCA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTTTCCTGTTAGCAGTGTaGTACACTCGAGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: MVEPFRQQICFRFRENSCFLLAV*YTREAR
Trigger: CCTGGCTTCTCGAGTGTATCACACTGCTAACAGGAA...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR TCA 90 bp AAACAACTTCGTGAATTCTGGATAAGCATACATTTCCTCTCCCAAGACTTCCAATGCATATTGGATCCATaGCTCCAAGTGACCATCGCT +
Preference number: 4 (lower is better)
Translates to: KQLREFWISIHFLSQDFQCILDP*LQVTIA
Trigger: AGCGATGGTCACTTGGAGTCATGGATCCAATATGCA...TTGGAAGTCTTGGGAGAGGAAATGTATGCTTATCCAGAATTCACGAAGTTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR TCA 90 bp TTCAGAGGTAGAAGATTTCAGGGACAGAGCAATGTCAACAGGAACCCAAGATTTCCTTCCTTAGCATACTaGCTTTCTCATTTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: FRGRRFQGQSNVNRNPRFPSLAY*LSHLFC
Trigger: GCAGAACAAATGAGAAAGTCAGTATGCTAAGGAAGG...AAATCTTGGGTTCCTGTTGACATTGCTCTGTCCCTGAAATCTTCTACCTCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTCAGAAAGTCTTTCTGTaGTTGCTTGGTGGCTTCATC +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCQKVFL*LLGGFI
Trigger: GATGAAGCCACCAAGCAAGCACAGAAAGACTTTCTG...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR GCA 90 bp ACCTCGAGGAATCTTTCAAGAGATTTTGGAGGCTTGGATAACTCTTCATGCACGTCCTTTTTAGTTTCCTaGCGAACTTTCTCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: TSRNLSRDFGGLDNSSCTSFLVS*RTFSSS
Trigger: AGAGCTTGAGAAAGTTCGGCAGGAAACTAAAAAGGA...CGTGCATGAAGAGTTATCCAAGCCTCCAAAATCTCTTGAAAGATTCCTCGAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp CTCTGGTTAGTGTTATTCAAATGCATCCAGGAACTGATAAAACTTCTCAAACAATCTCGCTCACGAAGTTaGTGCGGATCCTCACTTTCC +
Preference number: 4 (lower is better)
Translates to: LWLVLFKCIQELIKLLKQSRSRS*CGSSLS
Trigger: GGAAAGTGAGGATCCGCAGCAACTTCGTGAGCGAGA...TTGTTTGAGAAGTTTTATCAGTTCCTGGATGCATTTGAATAACACTAACCAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTCCCTCGGTATGTCCTTaGTTGAGAATTTTGGTGATC +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCPSVCP*LRILVI
Trigger: GATCACCAAAATTCTCAAGCAAGGACATACCGAGGG...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTCTTCCACAGCTTCCTTaGTTCTCTTGGCCTTCATTT +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCLPQLP*FSWPSF
Trigger: AAATGAAGGCCAAGAGAACCAAGGAAGCTGTGGAAG...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR CCA 90 bp TTAGGCTTCAAAGACAGGGCTTTATTAAGGTCTTCCTCAGCTAGTTCATATTGCCTTCCACAGCTTCCTTaGTTCTCTTGGCCTTCATTT +
Preference number: 4 (lower is better)
Translates to: LGFKDRALLRSSSASSYCLPQLP*FSWPSF
Trigger: AAATGAAGGCCAAGAGAACCAAGGAAGCTGTGGAAG...GCAATATGAACTAGCTGAGGAAGACCTTAATAAAGCCCTGTCTTTGAAGCCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478811.6
CDS-3UTR CCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTCTGCTGAAATTGCTGTaGCATCTGGTCCTTTATCAG +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCLLKLL*HLVLYQ
Trigger: CTGATAAAGGACCAGATGCCACAGCAATTTCAGCAG...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR CCA 90 bp CTGTTTAATACATTGTCAGCAAGGATTGATGAAAAGGTCAGTGACACTTTTTCTTTCTGTGATGGCACATaGCAGTGGCGTGACAAAGGC +
Preference number: 4 (lower is better)
Translates to: LFNTLSARIDEKVSDTFSFCDGT*QWRDKG
Trigger: GCCTTTGTCACGCCACTGCCATGTGCCATCACAGAA...AGAAAAAGTGTCACTGACCTTTTCATCAATCCTTGCTGACAATGTATTAAACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476979.5
CDS-3UTR CCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTTCTGTGCTTGCTTGGTaGCTTCATCATGACCGTATT +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCSVLAW*LHHDRI
Trigger: AATACGGTCATGATGAAGCCACCAAGCAAGCACAGA...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR CCA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTTTCTGTGCTTGCTTaGTGGCTTCATCATGACCGT +
Preference number: 4 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSLSVLA*WLHHDR
Trigger: ACGGTCATGATGAAGCCACCAAGCAAGCACAGAAAG...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR CCA 90 bp GAATTCTGGATAAGCATACATTTCCTCTCCCAAGACTTCCAAGTGTGGTTTGTGTCCTCAGCACCCATCTaGAATTTATACTCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: EFWISIHFLSQDFQVWFVSSAPI*NLYSAC
Trigger: ACAAGCAGAGTATAAATTCCAGATGGGTGCTGAGGA...CACAAACCACACTTGGAAGTCTTGGGAGAGGAAATGTATGCTTATCCAGAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR TCA 90 bp ATCTGTATACTGTTTAATACATTGTCAGCAAGGATTGATGAAAAGGTCAGTGACCAGCTCTATTCCAGCTaGTTCCGTCCAAGACCTCAA +
Preference number: 4 (lower is better)
Translates to: ICILFNTLSARIDEKVSDQLYSS*FRPRPQ
Trigger: TTGAGGTCTTGGACGGAATCAGCTGGAATAGAGCTG...GTCACTGACCTTTTCATCAATCCTTGCTGACAATGTATTAAACAGTATACAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476979.5
CDS-3UTR TCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACAACTCATTAATTCTGTaGTGGCACATGGCAGTGGCG +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYNSLIL*WHMAVA
Trigger: CGCCACTGCCATGTGCCATCACAGAATTAATGAGTT...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR TCA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTTGGCCCATAAACTCATaGATCACCCCACGATTTGTT +
Preference number: 4 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSWPINS*ITPRFV
Trigger: AACAAATCGTGGGGTGATTCATGAGTTTATGGGCCA...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR TCA 90 bp TTCAAAGACAGGGCTTTATTAAGGTCTTCCTCAGCTAGTTCATATTGCTTTAAGCCCAGTTCTCAGAAATaGGTCAAGGGAAAGACTCCA +
Preference number: 4 (lower is better)
Translates to: FKDRALLRSSSASSYCFKPSSQK*VKGKTP
Trigger: TGGAGTCTTTCCCTTGACTCATTTCTGAGAACTGGG...CTTAAAGCAATATGAACTAGCTGAGGAAGACCTTAATAAAGCCCTGTCTTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478811.6
CDS-3UTR TCA 90 bp CTCATAACAAGAAATTCAGAGGTAGAAGATTTCAGGGACAGAGCAATGTCAACACTTTCTTGGTCTCAGTaGTTTACGTTTCCGCATTCG +
Preference number: 4 (lower is better)
Translates to: LITRNSEVEDFRDRAMSTLSWSQ*FTFPHS
Trigger: CGAATGCGGAAACGTAAATCACTGAGACCAAGAAAG...TGTTGACATTGCTCTGTCCCTGAAATCTTCTACCTCTGAATTTCTTGTTATGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR TCA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTTTCTTGGTCTCAGTaGTTTACGTTTCCGCATTCG +
Preference number: 4 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSLSWSQ*FTFPHS
Trigger: CGAATGCGGAAACGTAAATCACTGAGACCAAGAAAG...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR TCA 90 bp GAACTCAGTGATCCAAATGTTGAAGGATTTACCACCACAATTGCCAGAAATAGCTGTATCCATCAGCCTTaGTTTCCTCATCAGTCAAAC +
Preference number: 4 (lower is better)
Translates to: ELSDPNVEGFTTTIARNSCIHQP*FPHQSN
Trigger: GTTTGACTGATGAGGAAATCAAGGCTGATGGATACA...GCTATTTCTGGCAATTGTGGTGGTAAATCCTTCAACATTTGGATCACTGAGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR TCA 90 bp TTCAGAGGTAGAAGATTTCAGGGACAGAGCAATGTCAACAGGAACCCAAGATTTGGAAAGCTGATTAAATaGGATTTGTGTGGAGTCAGT +
Preference number: 4 (lower is better)
Translates to: FRGRRFQGQSNVNRNPRFGKLIK*DLCGVS
Trigger: ACTGACTCCACACAAATCTCATTTAATCAGCTTTCC...AAATCTTGGGTTCCTGTTGACATTGCTCTGTCCCTGAAATCTTCTACCTCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTAGTCCGGCTTATCAGTaGAGCTTGTTTAAAATCCTC +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCSPAYQ*SLFKIL
Trigger: GAGGATTTTAAACAAGCTGCACTGATAAGCCGGACT...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR GCA 90 bp AAACAACTTCGTGAATTCTGGATAAGCATACATTTCCTCTCCCAAGACTTCCAATTGGAGGCCAACTTCTaGTTGAATCGGAGAAAATCC +
Preference number: 4 (lower is better)
Translates to: KQLREFWISIHFLSQDFQLEANF*LNRRKS
Trigger: GGATTTTCTCCGATTCAAGCAGAAGTTGGCCTCCAA...TTGGAAGTCTTGGGAGAGGAAATGTATGCTTATCCAGAATTCACGAAGTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp TTGTTCAGACCTCGAGGAATCTTTCAAGAGATTTTGGAGGCTTGGATAACTCTTTCAGAAAGTTCCTTATaGACGCTCATTTGCGATTCC +
Preference number: 4 (lower is better)
Translates to: LFRPRGIFQEILEAWITLSESSL*TLICDS
Trigger: GGAATCGCAAATGAGCGTGCATAAGGAACTTTCTGA...AAGAGTTATCCAAGCCTCCAAAATCTCTTGAAAGATTCCTCGAGGTCTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTCTCTCTAGTTCCTTGTaGCAATTCAGGTGGTATCCC +
Preference number: 4 (lower is better)
Translates to: MVEPFRQQICFRFRENSCLSSSL*QFRWYP
Trigger: GGGATACCACCTGAATTGGCACAAGGAACTAGAGAG...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACCGTCCAAGACCTCAATaGCCTTGTCATGGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYRPRPQ*PCHGFH
Trigger: GTGAAAACCATGACAAGGCCATTGAGGTCTTGGACG...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR CCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTCTAATAGAGCACACATaGTCATCTCAGCTCTATTCC +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCLIEHT*SSQLYS
Trigger: GGAATAGAGCTGAGATGACCATGTGTGCTCTATTAG...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR CCA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTTCCACAGCTTCCTTaGTTCTCTTGGCCTTCATTT +
Preference number: 4 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSLPQLP*FSWPSF
Trigger: AAATGAAGGCCAAGAGAACCAAGGAAGCTGTGGAAG...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR CCA 90 bp TCAGCCATAGCTTCCTCAATCAGACCTATTTTACCACGAACTTTTGCTCTAAAACTGCTGAAATTGCTGTaGCATCTGGTCCTTTATCAG +
Preference number: 4 (lower is better)
Translates to: SAIASSIRPILPRTFALKLLKLL*HLVLYQ
Trigger: CTGATAAAGGACCAGATGCCACAGCAATTTCAGCAG...TTTTAGAGCAAAAGTTCGTGGTAAAATAGGTCTGATTGAGGAAGCTATGGCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478811.6
CDS-3UTR CCA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTTCTGTGCTTGCTTGGTaGCTTCATCATGACCGTATT +
Preference number: 4 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSSVLAW*LHHDRI
Trigger: AATACGGTCATGATGAAGCCACCAAGCAAGCACAGA...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR CCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACCTTTCTGTGCTTGCTTaGTGGCTTCATCATGACCGT +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYLSVLA*WLHHDR
Trigger: ACGGTCATGATGAAGCCACCAAGCAAGCACAGAAAG...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR CCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTTGCCTGGTAATGTTTTaGATTGAGGGTAATTGCACG +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCCLVMF*IEGNCT
Trigger: CGTGCAATTACCCTCAATCCAAAACATTACCAGGCA...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382320.4
ENST00000478811.6
ENST00000553443.5
CDS-3UTR CCA 90 bp TTAGGCTTCAAAGACAGGGCTTTATTAAGGTCTTCCTCAGCTAGTTCATATTGCTGCCTGGTAATGTTTTaGATTGAGGGTAATTGCACG +
Preference number: 4 (lower is better)
Translates to: LGFKDRALLRSSSASSYCCLVMF*IEGNCT
Trigger: CGTGCAATTACCCTCAATCCAAAACATTACCAGGCA...GCAATATGAACTAGCTGAGGAAGACCTTAATAAAGCCCTGTCTTTGAAGCCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478811.6
CDS-3UTR CCA 90 bp ACCTCGAGGAATCTTTCAAGAGATTTTGGAGGCTTGGATAACTCTTCATGCACGTCCTCTTGTTCAATCTaGAGAATACTTGACATGGTT +
Preference number: 4 (lower is better)
Translates to: TSRNLSRDFGGLDNSSCTSSCSI*RILDMV
Trigger: AACCATGTCAAGTATTCTCCAGATTGAACAAGAGGA...CGTGCATGAAGAGTTATCCAAGCCTCCAAAATCTCTTGAAAGATTCCTCGAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTCTTTTGAATCACTTGTaGGCTGTCCATCTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCLLNHL*AVHLPK
Trigger: CTTTGGAAGATGGACAGCCCACAAGTGATTCAAAAG...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACCAAGACTTCCAAGTGTaGTTTGTGAGCACGCTCTCT +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYQDFQV*FVSTLS
Trigger: AGAGAGCGTGCTCACAAACCACACTTGGAAGTCTTG...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR TCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTCTCTTGGCCTTCATTTaGACTTTTGCTAATAGAGCA +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCLLAFI*TFANRA
Trigger: TGCTCTATTAGCAAAAGTTCAAATGAAGGCCAAGAG...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR TCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTTCTGTTAATGCCATTTaGAGTTCCCTTATCTTGGTG +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCSVNAI*SSLILV
Trigger: CACCAAGATAAGGGAACTTCAAATGGCATTAACAGA...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR TCA 90 bp ATCTGTATACTGTTTAATACATTGTCAGCAAGGATTGATGAAAAGGTCAGTGACAACTCATTAATTCTGTaGTGGCACATGGCAGTGGCG +
Preference number: 4 (lower is better)
Translates to: ICILFNTLSARIDEKVSDNSLIL*WHMAVA
Trigger: CGCCACTGCCATGTGCCATCACAGAATTAATGAGTT...GTCACTGACCTTTTCATCAATCCTTGCTGACAATGTATTAAACAGTATACAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476979.5
CDS-3UTR TCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTAAATTATTACCCATCTaGAGACAGACCACAGCTCTT +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCKLLPI*RQTTAL
Trigger: AAGAGCTGTGGTCTGTCTTCAGATGGGTAATAATTT...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR TCA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTTATGCTTTCTGCTTCTaGGGGTCCCCATTCTATATC +
Preference number: 4 (lower is better)
Translates to: MVEPFRQQICFRFRENSCYAFCF*GSPFYI
Trigger: GATATAGAATGGGGACCCTCAGAAGCAGAAAGCATA...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR TCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTATAGAGTTTCCTTCATaGCAGATTCTGGAACAGAGA +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCIEFPS*QILEQR
Trigger: TCTCTGTTCCAGAATCTGTCATGAAGGAAACTCTAT...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR TCA 90 bp AAACAACTTCGTGAATTCTGGATAAGCATACATTTCCTCTCCCAAGACTTCCAATTTCCAAAGGAGCTATaGTCTTCTCCTTCCTCAAGT +
Preference number: 4 (lower is better)
Translates to: KQLREFWISIHFLSQDFQFPKEL*SSPSSS
Trigger: ACTTGAGGAAGGAGAAGATCATAGCTCCTTTGGAAA...TTGGAAGTCTTGGGAGAGGAAATGTATGCTTATCCAGAATTCACGAAGTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR TCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTTAGTGAGCTGGAGCTaGCGTTTCAATTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYLVSWS*RFNSFA
Trigger: AGCAAAGGAATTGAAACGTCAGCTCCAGCTCACTAA...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR TCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACCCCGGAAGTATTCCATaGGATGCTGATCTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYPGSIP*DADLSR
Trigger: TCTTGAAAGATCAGCATCTCATGGAATACTTCCGGG...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR TCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACCATCTTTGTACTCAATaGGCCTATCAAGAGCCCATG +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYHLCTQ*AYQEPM
Trigger: CATGGGCTCTTGATAGGCTCATTGAGTACAAAGATG...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR TCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACACATCTCACCCCTCCTaGAATAGATATCAGCATCTG +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYTSHPS*NRYQHL
Trigger: CAGATGCTGATATCTATTTCAGGAGGGGTGAGATGT...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR TCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTGGTGTAGCAGATGTATaGGGCCAATATTTACATAAG +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCGVADV*GQYLHK
Trigger: CTTATGTAAATATTGGCCTCATACATCTGCTACACC...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR GCA 90 bp TCAGCCATAGCTTCCTCAATCAGACCTATTTTACCACGAACTTTTGCTCTAAAAAGTCCGGCTTATCAGTaGAGCTTGTTTAAAATCCTC +
Preference number: 4 (lower is better)
Translates to: SAIASSIRPILPRTFALKSPAYQ*SLFKIL
Trigger: GAGGATTTTAAACAAGCTGCACTGATAAGCCGGACT...TTTTAGAGCAAAAGTTCGTGGTAAAATAGGTCTGATTGAGGAAGCTATGGCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000478811.6
CDS-3UTR GCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTTTGGTAGTCTTTCATTaGATTCTGTTTGTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCLVVFH*ILFVAH
Trigger: ATGGGCCACAAACAGAATGCAATGAAAGACTACCAA...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR GCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTGTCTTCAAGATCAAGTaGTTGGTTATAGTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCVFKIK*LVIVSH
Trigger: ATGGCTGACTATAACCAAGCACTTGATCTTGAAGAC...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR GCA 90 bp TTAGGCTTCAAAGACAGGGCTTTATTAAGGTCTTCCTCAGCTAGTTCATATTGCGTCTTCAAGATCAAGTaGTTGGTTATAGTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: LGFKDRALLRSSSASSYCVFKIK*LVIVSH
Trigger: ATGGCTGACTATAACCAAGCACTTGATCTTGAAGAC...GCAATATGAACTAGCTGAGGAAGACCTTAATAAAGCCCTGTCTTTGAAGCCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478811.6
CDS-3UTR GCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTTGGAGGCCAACTTCTaGTTGAATCGGAGAAAATCC +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYLEANF*LNRRKS
Trigger: GGATTTTCTCCGATTCAAGCAGAAGTTGGCCTCCAA...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR GCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTAAGAGTATTACTCTCTaGAGATCATTCATGGCACTC +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCKSITL*RSFMAL
Trigger: GAGTGCCATGAATGATCTGCAGAGAGTAATACTCTT...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp ATCTGTATACTGTTTAATACATTGTCAGCAAGGATTGATGAAAAGGTCAGTGACCGTCCAAGACCTCAATaGCCTTGTCATGGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: ICILFNTLSARIDEKVSDRPRPQ*PCHGFH
Trigger: GTGAAAACCATGACAAGGCCATTGAGGTCTTGGACG...GTCACTGACCTTTTCATCAATCCTTGCTGACAATGTATTAAACAGTATACAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476979.5
CDS-3UTR CCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTCTTCCTTGGTTCTCTTaGCCTTCATTTGAACTTTTG +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCLPWFS*PSFELL
Trigger: CAAAAGTTCAAATGAAGGCCAAGAGAACCAAGGAAG...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR CCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTAATTGCTGTGGCATCTaGTCCTTTATCAGAATGAGA +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCNCCGI*SFIRMR
Trigger: TCTCATTCTGATAAAGGACCAGATGCCACAGCAATT...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR CCA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTCTGCTGAAATTGCTGTaGCATCTGGTCCTTTATCAG +
Preference number: 4 (lower is better)
Translates to: MVEPFRQQICFRFRENSCLLKLL*HLVLYQ
Trigger: CTGATAAAGGACCAGATGCCACAGCAATTTCAGCAG...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR CCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTCTGTGCTTGCTTGGTaGCTTCATCATGACCGTATT +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYSVLAW*LHHDRI
Trigger: AATACGGTCATGATGAAGCCACCAAGCAAGCACAGA...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR CCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTATGGCAATGGTAAAGTaGTTCCAAGCTTTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCMAMVK*FQAFWN
Trigger: ATTCCAGAAAGCTTGGAACCACTTTACCATTGCCAT...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR CCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTATCGAGCTATCCTTGTaGAGTTTCACTTTACAAAGC +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCIELSL*SFTLQS
Trigger: GCTTTGTAAAGTGAAACTCCACAAGGATAGCTCGAT...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382320.4
ENST00000478811.6
ENST00000553443.5
CDS-3UTR CCA 90 bp TTGGTCCTCTGGTTAGTGTTATTCAAATGCATCCAGGAACTGATAAAACTTCTCCTTTTGAATCACTTGTaGGCTGTCCATCTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: LVLWLVLFKCIQELIKLLLLNHL*AVHLPK
Trigger: CTTTGGAAGATGGACAGCCCACAAGTGATTCAAAAG...GAGAAGTTTTATCAGTTCCTGGATGCATTTGAATAACACTAACCAGAGGACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp GAATTCTGGATAAGCATACATTTCCTCTCCCAAGACTTCCAAGTGTGGTTTGTGTTAAAGACACCCACTTaGCTTCTTTTGAATCACTTG +
Preference number: 4 (lower is better)
Translates to: EFWISIHFLSQDFQVWFVLKTPT*LLLNHL
Trigger: CAAGTGATTCAAAAGAAGCCAAGTGGGTGTCTTTAA...CACAAACCACACTTGGAAGTCTTGGGAGAGGAAATGTATGCTTATCCAGAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTCATGAAGGTGCGGCATaGAGTAGTCTTGTGGAATTT +
Preference number: 4 (lower is better)
Translates to: MVEPFRQQICFRFRENSCHEGAA*SSLVEF
Trigger: AAATTCCACAAGACTACTCCATGCCGCACCTTCATG...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp GAAGATGTTCTTACTGGTCAACTTGCAGTAGAACACTGCAGAATAATTAAATCACAAGACTTCCAAGTGTaGTTTGTGAGCACGCTCTCT +
Preference number: 4 (lower is better)
Translates to: EDVLTGQLAVEHCRIIKSQDFQV*FVSTLS
Trigger: AGAGAGCGTGCTCACAAACCACACTTGGAAGTCTTG...TGATTTAATTATTCTGCAGTGTTCTACTGCAAGTTGACCAGTAAGAACATCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp CTCATAACAAGAAATTCAGAGGTAGAAGATTTCAGGGACAGAGCAATGTCAACAGAGATTTTGGAGGCTTaGATAACTCTTCATGCACGA +
Preference number: 4 (lower is better)
Translates to: LITRNSEVEDFRDRAMSTEILEA*ITLHAR
Trigger: TCGTGCATGAAGAGTTATCCAAGCCTCCAAAATCTC...TGTTGACATTGCTCTGTCCCTGAAATCTTCTACCTCTGAATTTCTTGTTATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTGAGATTTTGGAGGCTTaGATAACTCTTCATGCACGA +
Preference number: 4 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSEILEA*ITLHAR
Trigger: TCGTGCATGAAGAGTTATCCAAGCCTCCAAAATCTC...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp CGAGGAATCTTTCAAGAGATTTTGGAGGCTTGGATAACTCTTCATGCACGAATAACTAGCTTGGTCCTCTaGTTAGTGTTATTCAAATGC +
Preference number: 4 (lower is better)
Translates to: RGIFQEILEAWITLHARITSLVL*LVLFKC
Trigger: GCATTTGAATAACACTAACCAGAGGACCAAGCTAGT...TATTCGTGCATGAAGAGTTATCCAAGCCTCCAAAATCTCTTGAAAGATTCCTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR CAA 72 bp CCTTGCGGTGTCGGAGGAATATGGACATATTCTTGGTaGTCATCCATAACAGGAATTCCATACAATATTCTA +
Preference number: 4 (lower is better)
Translates to: PCGVGGIWTYSW*SSITGIPYNIL
Trigger: TAGAATATTGTATGGAATTCCTGTTATGGATGACAACCAAGAATATGTCCATATTCCTCCGACACCGCAAGG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR CAA 72 bp TATCCCTTGCGGTGTCGGAGGAATATGGACATATTCTaGGTTGTCATCCATAACAGGAATTCCATACAATAT +
Preference number: 4 (lower is better)
Translates to: YPLRCRRNMDIF*VVIHNRNSIQY
Trigger: ATATTGTATGGAATTCCTGTTATGGATGACAACCAAGAATATGTCCATATTCCTCCGACACCGCAAGGGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR CAA 72 bp TTTGTGTGGAGTCAGTTGCACAATCAGTTTGTCCAATaGTATCCATCAGCCTTGATTTCCTCATCAGTCAAA +
Preference number: 4 (lower is better)
Translates to: FVWSQLHNQFVQ*YPSALISSSVK
Trigger: TTTGACTGATGAGGAAATCAAGGCTGATGGATACAATTGGACAAACTGATTGTGCAACTGACTCCACACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR TCA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTTCTGTTAATGCCATTTaGAGTTCCCTTATCTTGGTG +
Preference number: 4 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSSVNAI*SSLILV
Trigger: CACCAAGATAAGGGAACTTCAAATGGCATTAACAGA...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR TCA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTATCACAAAGAGGTTTTaGAGACTTTCTTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSITKRF*RLSWSQ
Trigger: CTGAGACCAAGAAAGTCTTCAAAACCTCTTTGTGAT...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR TCA 90 bp TTGTTCAGACCTCGAGGAATCTTTCAAGAGATTTTGGAGGCTTGGATAACTCTTTCCAAAACAACTTCGTaGATTCTGGATAAGCATACA +
Preference number: 4 (lower is better)
Translates to: LFRPRGIFQEILEAWITLSKTTS*ILDKHT
Trigger: TGTATGCTTATCCAGAATTCACGAAGTTGTTTTGGA...AAGAGTTATCCAAGCCTCCAAAATCTCTTGAAAGATTCCTCGAGGTCTGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR TCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTTCCAAAACAACTTCGTaGATTCTGGATAAGCATACA +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCSKTTS*ILDKHT
Trigger: TGTATGCTTATCCAGAATTCACGAAGTTGTTTTGGA...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR TCA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTTTTCCAAAGGAGCTATaGTCTTCTCCTTCCTCAAGT +
Preference number: 4 (lower is better)
Translates to: MVEPFRQQICFRFRENSCFPKEL*SSPSSS
Trigger: ACTTGAGGAAGGAGAAGATCATAGCTCCTTTGGAAA...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR TCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACCTGGGACACCGTATTTaGCGTTCATATAATGGAACT +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYLGHRI*RSYNGT
Trigger: AGTTCCATTATATGAACGTCAAATACGGTGTCCCAG...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR GCA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTAGTCCGGCTTATCAGTaGAGCTTGTTTAAAATCCTC +
Preference number: 4 (lower is better)
Translates to: MVEPFRQQICFRFRENSCSPAYQ*SLFKIL
Trigger: GAGGATTTTAAACAAGCTGCACTGATAAGCCGGACT...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR GCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTTCTGGCTTTTATGTATaGTGGATTAATATGCAGTGC +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCSGFYV*WINMQC
Trigger: GCACTGCATATTAATCCAGCATACATAAAAGCCAGA...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR GCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTCTGGAATTTATACTCTaGTTGTATCTCAGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCLEFIL*LYLRCF
Trigger: GAAACACCTGAGATACAAGCAGAGTATAAATTCCAG...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR GCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTCAGAAAGTTCCTTATaGACGCTCATTTGCGATTCC +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYSESSL*TLICDS
Trigger: GGAATCGCAAATGAGCGTGCATAAGGAACTTTCTGA...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR GCA 90 bp AGAGAATTTAGGTGCAGCTGTATTCCAAAACAACTTCGTGAATTCTGGATAAGCTCTTACTGGTCAACTTaGAGTAGAACACTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: REFRCSCIPKQLREFWISSYWST*SRTLQN
Trigger: ATTCTGCAGTGTTCTACTGCAAGTTGACCAGTAAGA...GCTTATCCAGAATTCACGAAGTTGTTTTGGAATACAGCTGCACCTAAATTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTTCTCTTTTACAGGTATaGTCGCATCTTTGTACTCAA +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCSLLQV*SHLCTQ
Trigger: TTGAGTACAAAGATGCGAGCATACCTGTAAAAGAGA...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR GCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTCATTCATGGCACTCTaGAACTTTCCCAGTTTCCTA +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYSFMAL*NFPSFL
Trigger: TAGGAAACTGGGAAAGTTGCAGAGTGCCATGAATGA...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp ATCTGTATACTGTTTAATACATTGTCAGCAAGGATTGATGAAAAGGTCAGTGACCTTCCACAGCTTCCTTaGTTCTCTTGGCCTTCATTT +
Preference number: 4 (lower is better)
Translates to: ICILFNTLSARIDEKVSDLPQLP*FSWPSF
Trigger: AAATGAAGGCCAAGAGAACCAAGGAAGCTGTGGAAG...GTCACTGACCTTTTCATCAATCCTTGCTGACAATGTATTAAACAGTATACAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476979.5
CDS-3UTR CCA 90 bp TCAGCCATAGCTTCCTCAATCAGACCTATTTTACCACGAACTTTTGCTCTAAAAAATTGCTGTGGCATCTaGTCCTTTATCAGAATGAGA +
Preference number: 4 (lower is better)
Translates to: SAIASSIRPILPRTFALKNCCGI*SFIRMR
Trigger: TCTCATTCTGATAAAGGACCAGATGCCACAGCAATT...TTTTAGAGCAAAAGTTCGTGGTAAAATAGGTCTGATTGAGGAAGCTATGGCTGA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000478811.6
CDS-3UTR CCA 90 bp CTGTTTAATACATTGTCAGCAAGGATTGATGAAAAGGTCAGTGACACTTTTTCTCTGCTGAAATTGCTGTaGCATCTGGTCCTTTATCAG +
Preference number: 4 (lower is better)
Translates to: LFNTLSARIDEKVSDTFSLLKLL*HLVLYQ
Trigger: CTGATAAAGGACCAGATGCCACAGCAATTTCAGCAG...AGAAAAAGTGTCACTGACCTTTTCATCAATCCTTGCTGACAATGTATTAAACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476979.5
CDS-3UTR CCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTGAAGTTCCCTTATCTTaGTGTAACATAATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCEVPLS*CNIMLC
Trigger: ACAGAGCATTATGTTACACCAAGATAAGGGAACTTC...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR CCA 90 bp TTAGGCTTCAAAGACAGGGCTTTATTAAGGTCTTCCTCAGCTAGTTCATATTGCGAAGTTCCCTTATCTTaGTGTAACATAATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LGFKDRALLRSSSASSYCEVPLS*CNIMLC
Trigger: ACAGAGCATTATGTTACACCAAGATAAGGGAACTTC...GCAATATGAACTAGCTGAGGAAGACCTTAATAAAGCCCTGTCTTTGAAGCCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478811.6
CDS-3UTR CCA 90 bp TCAGCCATAGCTTCCTCAATCAGACCTATTTTACCACGAACTTTTGCTCTAAAAATGGCAATGGTAAAGTaGTTCCAAGCTTTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: SAIASSIRPILPRTFALKMAMVK*FQAFWN
Trigger: ATTCCAGAAAGCTTGGAACCACTTTACCATTGCCAT...TTTTAGAGCAAAAGTTCGTGGTAAAATAGGTCTGATTGAGGAAGCTATGGCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000478811.6
CDS-3UTR CCA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTATGGCAATGGTAAAGTaGTTCCAAGCTTTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSMAMVK*FQAFWN
Trigger: ATTCCAGAAAGCTTGGAACCACTTTACCATTGCCAT...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR CCA 90 bp TCAGCCATAGCTTCCTCAATCAGACCTATTTTACCACGAACTTTTGCTCTAAAAATCGAGCTATCCTTGTaGAGTTTCACTTTACAAAGC +
Preference number: 4 (lower is better)
Translates to: SAIASSIRPILPRTFALKIELSL*SFTLQS
Trigger: GCTTTGTAAAGTGAAACTCCACAAGGATAGCTCGAT...TTTTAGAGCAAAAGTTCGTGGTAAAATAGGTCTGATTGAGGAAGCTATGGCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000478811.6
CDS-3UTR CCA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTTGCCTGGTAATGTTTTaGATTGAGGGTAATTGCACG +
Preference number: 4 (lower is better)
Translates to: MVEPFRQQICFRFRENSCCLVMF*IEGNCT
Trigger: CGTGCAATTACCCTCAATCCAAAACATTACCAGGCA...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTTCCTCAGCACCCATCTaGAATTTATACTCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: MVEPFRQQICFRFRENSCSSAPI*NLYSAC
Trigger: ACAAGCAGAGTATAAATTCCAGATGGGTGCTGAGGA...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTTCCTCTTGTTCAATCTaGAGAATACTTGACATGGTT +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCSSCSI*RILDMV
Trigger: AACCATGTCAAGTATTCTCCAGATTGAACAAGAGGA...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp AAACAACTTCGTGAATTCTGGATAAGCATACATTTCCTCTCCCAAGACTTCCAACTTCATGACAGATTCTaGAACAGAGAATTTAGGTGC +
Preference number: 4 (lower is better)
Translates to: KQLREFWISIHFLSQDFQLHDRF*NREFRC
Trigger: GCACCTAAATTCTCTGTTCCAGAATCTGTCATGAAG...TTGGAAGTCTTGGGAGAGGAAATGTATGCTTATCCAGAATTCACGAAGTTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTAGGATCAATATTTTCTaGAATTCCTCCCTTAGCTTG +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCRINIF*NSSLSL
Trigger: CAAGCTAAGGGAGGAATTCCAGAAAATATTGATCCT...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTTTTAATGACCTCTTGTaGAAGATCAGACTCCACATA +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCFNDLL*KIRLHI
Trigger: TATGTGGAGTCTGATCTTCCACAAGAGGTCATTAAA...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTGGCATTGAGAAACAATaGTTCCAAGAGTATTACTCT +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCGIEKQ*FQEYYS
Trigger: AGAGTAATACTCTTGGAACCATTGTTTCTCAATGCC...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553443.5
3UTR CAA 72 bp CAGACCTCGAGGAATCTTTCAAGAGATTTTGGAGGCTaGGATAACTCTTCATGCACGAATATAAGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: QTSRNLSRDFGG*DNSSCTNISFC
Trigger: ACAAAAACTTATATTCGTGCATGAAGAGTTATCCAAGCCTCCAAAATCTCTTGAAAGATTCCTCGAGGTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533625.5
3UTR CAA 72 bp GAAGGAAGAAAATCGAAGAACTCAGTGATCCAAATGTaGAAGGATTTACCACCACAATTGCCAGAAATAGCA +
Preference number: 4 (lower is better)
Translates to: EGRKSKNSVIQM*KDLPPQLPEIA
Trigger: TGCTATTTCTGGCAATTGTGGTGGTAAATCCTTCAACATTTGGATCACTGAGTTCTTCGATTTTCTTCCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR TCA 90 bp TTCAAAGACAGGGCTTTATTAAGGTCTTCCTCAGCTAGTTCATATTGCTTTAAGAAATTATTACCCATCTaGAGACAGACCACAGCTCTT +
Preference number: 4 (lower is better)
Translates to: FKDRALLRSSSASSYCFKKLLPI*RQTTAL
Trigger: AAGAGCTGTGGTCTGTCTTCAGATGGGTAATAATTT...CTTAAAGCAATATGAACTAGCTGAGGAAGACCTTAATAAAGCCCTGTCTTTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478811.6
CDS-3UTR TCA 90 bp AGAGAATTTAGGTGCAGCTGTATTCCAAAACAACTTCGTGAATTCTGGATAAGCTTCTGCTTGCATAGGTaGTGTTTTGAGGTACATTTT +
Preference number: 4 (lower is better)
Translates to: REFRCSCIPKQLREFWISFCLHR*CFEVHF
Trigger: AAAATGTACCTCAAAACATCACCTATGCAAGCAGAA...GCTTATCCAGAATTCACGAAGTTGTTTTGGAATACAGCTGCACCTAAATTCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR TCA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTTTCTGCTTGCATAGGTaGTGTTTTGAGGTACATTTT +
Preference number: 4 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSFCLHR*CFEVHF
Trigger: AAAATGTACCTCAAAACATCACCTATGCAAGCAGAA...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR TCA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTAATCTGGAGAATACTTaGCATGGTTTCAGAAAGTTC +
Preference number: 4 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSNLENT*HGFRKF
Trigger: GAACTTTCTGAAACCATGTCAAGTATTCTCCAGATT...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR TCA 90 bp TTGGTCCTCTGGTTAGTGTTATTCAAATGCATCCAGGAACTGATAAAACTTCTCAGCTTCATTGATGAGTaGAACGAAGATGTTCTTACT +
Preference number: 4 (lower is better)
Translates to: LVLWLVLFKCIQELIKLLSFIDE*NEDVLT
Trigger: AGTAAGAACATCTTCGTTTCACTCATCAATGAAGCT...GAGAAGTTTTATCAGTTCCTGGATGCATTTGAATAACACTAACCAGAGGACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR TCA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTTGGGTCTTCAGGAACTaGTATTTTATCATCTTTCTC +
Preference number: 4 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSWVFRN*YFIIFL
Trigger: GAGAAAGATGATAAAATATCAGTTCCTGAAGACCCA...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR GCA 90 bp ATCTGTATACTGTTTAATACATTGTCAGCAAGGATTGATGAAAAGGTCAGTGACAGTCCGGCTTATCAGTaGAGCTTGTTTAAAATCCTC +
Preference number: 4 (lower is better)
Translates to: ICILFNTLSARIDEKVSDSPAYQ*SLFKIL
Trigger: GAGGATTTTAAACAAGCTGCACTGATAAGCCGGACT...GTCACTGACCTTTTCATCAATCCTTGCTGACAATGTATTAAACAGTATACAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476979.5
CDS-3UTR GCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTTGGATTAATATGCAGTaGTTTCAGAAAGTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCWINMQ*FQKVFL
Trigger: CAGAAAGACTTTCTGAAAGCACTGCATATTAATCCA...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR GCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTTATGCTGGATTAATATaGAGTGCTTTCAGAAAGTCT +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCYAGLI*SAFRKS
Trigger: AGACTTTCTGAAAGCACTGCATATTAATCCAGCATA...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR GCA 90 bp TTAGGCTTCAAAGACAGGGCTTTATTAAGGTCTTCCTCAGCTAGTTCATATTGCTATGCTGGATTAATATaGAGTGCTTTCAGAAAGTCT +
Preference number: 4 (lower is better)
Translates to: LGFKDRALLRSSSASSYCYAGLI*SAFRKS
Trigger: AGACTTTCTGAAAGCACTGCATATTAATCCAGCATA...GCAATATGAACTAGCTGAGGAAGACCTTAATAAAGCCCTGTCTTTGAAGCCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478811.6
CDS-3UTR GCA 90 bp TTCAAAGACAGGGCTTTATTAAGGTCTTCCTCAGCTAGTTCATATTGCTTTAAGTTGGTAGTCTTTCATTaGATTCTGTTTGTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: FKDRALLRSSSASSYCFKLVVFH*ILFVAH
Trigger: ATGGGCCACAAACAGAATGCAATGAAAGACTACCAA...CTTAAAGCAATATGAACTAGCTGAGGAAGACCTTAATAAAGCCCTGTCTTTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478811.6
CDS-3UTR GCA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTTTGGTAGTCTTTCATTaGATTCTGTTTGTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: MVEPFRQQICFRFRENSCLVVFH*ILFVAH
Trigger: ATGGGCCACAAACAGAATGCAATGAAAGACTACCAA...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR GCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTAAGCCATTTGTAAATTaGCTTCCTCCATGTAACAAA +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCKPFVN*LPPCNK
Trigger: TTTGTTACATGGAGGAAGGCAATTTACAAATGGCTT...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382320.4
ENST00000478811.6
ENST00000553443.5
CDS-3UTR GCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTTGGATTGAGGGTAATTaGACGATTAAAATCCAGAAT +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCWIEGN*TIKIQN
Trigger: ATTCTGGATTTTAATCGTGCAATTACCCTCAATCCA...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382320.4
ENST00000478811.6
ENST00000553443.5
CDS-3UTR GCA 90 bp TTAGGCTTCAAAGACAGGGCTTTATTAAGGTCTTCCTCAGCTAGTTCATATTGCTGGATTGAGGGTAATTaGACGATTAAAATCCAGAAT +
Preference number: 4 (lower is better)
Translates to: LGFKDRALLRSSSASSYCWIEGN*TIKIQN
Trigger: ATTCTGGATTTTAATCGTGCAATTACCCTCAATCCA...GCAATATGAACTAGCTGAGGAAGACCTTAATAAAGCCCTGTCTTTGAAGCCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478811.6
CDS-3UTR GCA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTTTGCTTTGGAATACCTaGCTTTTAAACCATAGAATG +
Preference number: 4 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCLLWNT*LLNHRM
Trigger: CATTCTATGGTTTAAAAGGCAGGTATTCCAAAGCAA...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382320.4
ENST00000478811.6
ENST00000553443.5
CDS-3UTR GCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTCCTTTTTAGTTTCCTaGCGAACTTTCTCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYSFLVS*RTFSSS
Trigger: AGAGCTTGAGAAAGTTCGGCAGGAAACTAAAAAGGA...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR GCA 90 bp TTGTTCAGACCTCGAGGAATCTTTCAAGAGATTTTGGAGGCTTGGATAACTCTTTATCAGTTAAAAGTCTaGTTGCTTGAACACTCTCAT +
Preference number: 4 (lower is better)
Translates to: LFRPRGIFQEILEAWITLYQLKV*LLEHSH
Trigger: ATGAGAGTGTTCAAGCAAGCAGACTTTTAACTGATA...AAGAGTTATCCAAGCCTCCAAAATCTCTTGAAAGATTCCTCGAGGTCTGAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp TTGTTCAGACCTCGAGGAATCTTTCAAGAGATTTTGGAGGCTTGGATAACTCTTCTATCTTCAAACTGCTaGACTACATCAAATCATCTT +
Preference number: 4 (lower is better)
Translates to: LFRPRGIFQEILEAWITLLSSNC*TTSNHL
Trigger: AAGATGATTTGATGTAGTGCAGCAGTTTGAAGATAG...AAGAGTTATCCAAGCCTCCAAAATCTCTTGAAAGATTCCTCGAGGTCTGAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp CTCATAACAAGAAATTCAGAGGTAGAAGATTTCAGGGACAGAGCAATGTCAACACACCTATCTTCAAACTaGTGCACTACATCAAATCAT +
Preference number: 4 (lower is better)
Translates to: LITRNSEVEDFRDRAMSTHLSSN*CTTSNH
Trigger: ATGATTTGATGTAGTGCAGCAGTTTGAAGATAGGTG...TGTTGACATTGCTCTGTCCCTGAAATCTTCTACCTCTGAATTTCTTGTTATGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTCTTCCTTGGTTCTCTTaGCCTTCATTTGAACTTTTG +
Preference number: 4 (lower is better)
Translates to: MVEPFRQQICFRFRENSCLPWFS*PSFELL
Trigger: CAAAAGTTCAAATGAAGGCCAAGAGAACCAAGGAAG...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR CCA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTGAAGTTCCCTTATCTTaGTGTAACATAATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSEVPLS*CNIMLC
Trigger: ACAGAGCATTATGTTACACCAAGATAAGGGAACTTC...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR CCA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTATCGAGCTATCCTTGTaGAGTTTCACTTTACAAAGC +
Preference number: 4 (lower is better)
Translates to: MVEPFRQQICFRFRENSCIELSL*SFTLQS
Trigger: GCTTTGTAAAGTGAAACTCCACAAGGATAGCTCGAT...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTTTAAAGACACCCACTTaGCTTCTTTTGAATCACTTG +
Preference number: 4 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSLKTPT*LLLNHL
Trigger: CAAGTGATTCAAAAGAAGCCAAGTGGGTGTCTTTAA...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp AAACAACTTCGTGAATTCTGGATAAGCATACATTTCCTCTCCCAAGACTTCCAACAACTTCGTGAATTCTaGATAAGCATACATTTCCTC +
Preference number: 4 (lower is better)
Translates to: KQLREFWISIHFLSQDFQQLREF*ISIHFL
Trigger: GAGGAAATGTATGCTTATCCAGAATTCACGAAGTTG...TTGGAAGTCTTGGGAGAGGAAATGTATGCTTATCCAGAATTCACGAAGTTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTCTTCATGACAGATTCTaGAACAGAGAATTTAGGTGC +
Preference number: 4 (lower is better)
Translates to: MVEPFRQQICFRFRENSCLHDRF*NREFRC
Trigger: GCACCTAAATTCTCTGTTCCAGAATCTGTCATGAAG...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR TCA 90 bp ATCTGTATACTGTTTAATACATTGTCAGCAAGGATTGATGAAAAGGTCAGTGACTCTGTTAATGCCATTTaGAGTTCCCTTATCTTGGTG +
Preference number: 4 (lower is better)
Translates to: ICILFNTLSARIDEKVSDSVNAI*SSLILV
Trigger: CACCAAGATAAGGGAACTTCAAATGGCATTAACAGA...GTCACTGACCTTTTCATCAATCCTTGCTGACAATGTATTAAACAGTATACAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476979.5
CDS-3UTR TCA 90 bp TTCAAAGACAGGGCTTTATTAAGGTCTTCCTCAGCTAGTTCATATTGCTTTAAGTTAGGCAATACTCCATaGACTTTGCTTCCTCTTAAT +
Preference number: 4 (lower is better)
Translates to: FKDRALLRSSSASSYCFKLGNTP*TLLPLN
Trigger: ATTAAGAGGAAGCAAAGTTCATGGAGTATTGCCTAA...CTTAAAGCAATATGAACTAGCTGAGGAAGACCTTAATAAAGCCCTGTCTTTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478811.6
CDS-3UTR TCA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTAAAAGTCTGCTTGCTTaGACACTCTCATATTTTGGA +
Preference number: 4 (lower is better)
Translates to: MVEPFRQQICFRFRENSCKSLLA*TLSYFG
Trigger: TCCAAAATATGAGAGTGTTCAAGCAAGCAGACTTTT...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR TCA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTTATTCCATGAGATGCTaGTCTTTCAAGAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: MVEPFRQQICFRFRENSCYSMRC*SFKRFW
Trigger: CCAAAATCTCTTGAAAGATCAGCATCTCATGGAATA...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR TCA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTAAGGGTTACTCTTTCTaGATAAGCAACCTCGATAAT +
Preference number: 4 (lower is better)
Translates to: MVEPFRQQICFRFRENSCKGYSF*ISNLDN
Trigger: ATTATCGAGGTTGCTTATTCAGAAAGAGTAACCCTT...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR GCA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTTCTGGCTTTTATGTATaGTGGATTAATATGCAGTGC +
Preference number: 4 (lower is better)
Translates to: MVEPFRQQICFRFRENSCSGFYV*WINMQC
Trigger: GCACTGCATATTAATCCAGCATACATAAAAGCCAGA...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR GCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTCTGGCTTTTATGTATaGTGGATTAATATGCAGTGC +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYSGFYV*WINMQC
Trigger: GCACTGCATATTAATCCAGCATACATAAAAGCCAGA...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR GCA 90 bp ATCTGTATACTGTTTAATACATTGTCAGCAAGGATTGATGAAAAGGTCAGTGACTTGGTAGTCTTTCATTaGATTCTGTTTGTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: ICILFNTLSARIDEKVSDLVVFH*ILFVAH
Trigger: ATGGGCCACAAACAGAATGCAATGAAAGACTACCAA...GTCACTGACCTTTTCATCAATCCTTGCTGACAATGTATTAAACAGTATACAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476979.5
CDS-3UTR GCA 90 bp CTGTTTAATACATTGTCAGCAAGGATTGATGAAAAGGTCAGTGACACTTTTTCTGTCTTCAAGATCAAGTaGTTGGTTATAGTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: LFNTLSARIDEKVSDTFSVFKIK*LVIVSH
Trigger: ATGGCTGACTATAACCAAGCACTTGATCTTGAAGAC...AGAAAAAGTGTCACTGACCTTTTCATCAATCCTTGCTGACAATGTATTAAACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476979.5
CDS-3UTR GCA 90 bp TCAGCCATAGCTTCCTCAATCAGACCTATTTTACCACGAACTTTTGCTCTAAAAAAGCCATTTGTAAATTaGCTTCCTCCATGTAACAAA +
Preference number: 4 (lower is better)
Translates to: SAIASSIRPILPRTFALKKPFVN*LPPCNK
Trigger: TTTGTTACATGGAGGAAGGCAATTTACAAATGGCTT...TTTTAGAGCAAAAGTTCGTGGTAAAATAGGTCTGATTGAGGAAGCTATGGCTGA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000478811.6
CDS-3UTR GCA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTTTGCTTTGGAATACCTaGCTTTTAAACCATAGAATG +
Preference number: 4 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSLLWNT*LLNHRM
Trigger: CATTCTATGGTTTAAAAGGCAGGTATTCCAAAGCAA...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR GCA 90 bp AAACAACTTCGTGAATTCTGGATAAGCATACATTTCCTCTCCCAAGACTTCCAAAACAGAGAATTTAGGTaGAGCTGTATTCCAAAACAA +
Preference number: 4 (lower is better)
Translates to: KQLREFWISIHFLSQDFQNREFR*SCIPKQ
Trigger: TTGTTTTGGAATACAGCTGCACCTAAATTCTCTGTT...TTGGAAGTCTTGGGAGAGGAAATGTATGCTTATCCAGAATTCACGAAGTTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTCCACGCCTACAATATaGAAATGCAGGATATTTTGT +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYSTPTI*KCRIFC
Trigger: ACAAAATATCCTGCATTTGCATATTGTAGGCGTGGA...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR GCA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTTTTCCATTTAACATATaGAATCCCTCGGTATGTCCT +
Preference number: 4 (lower is better)
Translates to: MVEPFRQQICFRFRENSCFPFNI*NPSVCP
Trigger: AGGACATACCGAGGGATTGCATATGTTAAATGGAAA...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp ATCTGTATACTGTTTAATACATTGTCAGCAAGGATTGATGAAAAGGTCAGTGACATGGCAATGGTAAAGTaGTTCCAAGCTTTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: ICILFNTLSARIDEKVSDMAMVK*FQAFWN
Trigger: ATTCCAGAAAGCTTGGAACCACTTTACCATTGCCAT...GTCACTGACCTTTTCATCAATCCTTGCTGACAATGTATTAAACAGTATACAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476979.5
CDS-3UTR CCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACCAACTTCGTGAATTCTaGATAAGCATACATTTCCTC +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYQLREF*ISIHFL
Trigger: GAGGAAATGTATGCTTATCCAGAATTCACGAAGTTG...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACAATACAAAGGTAAACTaGGACACCGTATTTGACGTT +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYNTKVN*DTVFDV
Trigger: AACGTCAAATACGGTGTCCCAGTTTACCTTTGTATT...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR TCA 90 bp CTCTGGTTAGTGTTATTCAAATGCATCCAGGAACTGATAAAACTTCTCAAACAAAGTGAAAATTCCATTTaGATCCACTACTTGCCTGAT +
Preference number: 4 (lower is better)
Translates to: LWLVLFKCIQELIKLLKQSENSI*IHYLPD
Trigger: ATCAGGCAAGTAGTGGATTCAAATGGAATTTTCACT...TTGTTTGAGAAGTTTTATCAGTTCCTGGATGCATTTGAATAACACTAACCAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTGGATTAATATGCAGTaGTTTCAGAAAGTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYWINMQ*FQKVFL
Trigger: CAGAAAGACTTTCTGAAAGCACTGCATATTAATCCA...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR GCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATGCTGGATTAATATaGAGTGCTTTCAGAAAGTCT +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYYAGLI*SAFRKS
Trigger: AGACTTTCTGAAAGCACTGCATATTAATCCAGCATA...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR GCA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTAACAGAGAATTTAGGTaGAGCTGTATTCCAAAACAA +
Preference number: 4 (lower is better)
Translates to: MVEPFRQQICFRFRENSCNREFR*SCIPKQ
Trigger: TTGTTTTGGAATACAGCTGCACCTAAATTCTCTGTT...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR GCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATCAGTTAAAAGTCTaGTTGCTTGAACACTCTCAT +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYYQLKV*LLEHSH
Trigger: ATGAGAGTGTTCAAGCAAGCAGACTTTTAACTGATA...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR GCA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACACGTTTCAATTCCTTTaGTTTCTGAAACATAACCTC +
Preference number: 4 (lower is better)
Translates to: PFRQQICFRFRENSCVNYTFQFL*FLKHNL
Trigger: GAGGTTATGTTTCAGAAAGCAAAGGAATTGAAACGT...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR GCA 90 bp AGAAAATCGAAGAACTCAGTGATCCAAATGTTGAAGGATTTACCACCACAATTGCTTGCAGTAGAACACTaGAGAATAATTAAATCAGCT +
Preference number: 4 (lower is better)
Translates to: RKSKNSVIQMLKDLPPQLLAVEH*RIIKSA
Trigger: AGCTGATTTAATTATTCTGCAGTGTTCTACTGCAAG...CAATTGTGGTGGTAAATCCTTCAACATTTGGATCACTGAGTTCTTCGATTTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CCA 90 bp CTGTTTAATACATTGTCAGCAAGGATTGATGAAAAGGTCAGTGACACTTTTTCTGAAGTTCCCTTATCTTaGTGTAACATAATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LFNTLSARIDEKVSDTFSEVPLS*CNIMLC
Trigger: ACAGAGCATTATGTTACACCAAGATAAGGGAACTTC...AGAAAAAGTGTCACTGACCTTTTCATCAATCCTTGCTGACAATGTATTAAACAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476979.5
3UTR CAA 72 bp AACATAACCTCTTTTATACTGCTTTGCATATCATTCTaGATTTCCAAAGGAGCTATGATCTTCTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: NITSFILLCISF*ISKGAMIFSFL
Trigger: GAGGAAGGAGAAGATCATAGCTCCTTTGGAAATCAAGAATGATATGCAAAGCAGTATAAAAGAGGTTATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR GCA 90 bp CTCTGGTTAGTGTTATTCAAATGCATCCAGGAACTGATAAAACTTCTCAAACAATATTCCTTCCACAACTaGCAATTCTTCATTGAAAAC +
Preference number: 4 (lower is better)
Translates to: LWLVLFKCIQELIKLLKQYSFHN*QFFIEN
Trigger: GTTTTCAATGAAGAATTGGCAGTTGTGGAAGGAATA...TTGTTTGAGAAGTTTTATCAGTTCCTGGATGCATTTGAATAACACTAACCAGAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS CCA 90 bp GCGGCCTCCCGCGCGTCGCTGGGCGGCCAGCTCTCCTGTTCTCCCTaGGCTCCTAACCCCGCCGCTTCCCGCGCCTCGCGGGCCCCGCTC +
Preference number: 5 (lower is better)
Translates to: AASRASLGGQLSCSP*APNPAASRASRAPL
Trigger: GAGCGGGGCCCGCGAGGCGCGGGAAGCGGCGGGGTTAGGAGCCCAGGGAGAACAGGAGAGCTGGCCGCCCAGCGACGCGCGGGAGGCCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS GCA 90 bp GCCTCACCCAGGCCCGAGGGACGCGGCGCGCCTCCGAGCACCTCCTaGAGGAGGGCGGCCGCGGACATCGCAGGGCCTTTAAGCGAAGGG +
Preference number: 5 (lower is better)
Translates to: ASPRPEGRGAPPSTS*RRAAADIAGPLSEG
Trigger: CCCTTCGCTTAAAGGCCCTGCGATGTCCGCGGCCGCCCTCCTGCAGGAGGTGCTCGGAGGCGCGCCGCGTCCCTCGGGCCTGGGTGAGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS CCA 90 bp GCTCCGCAAGTAAAAGTCCCGGGGGCGAAACGACCGGGTCTTGCCTaGAGCCGCCGCCTCACCCAGGCCCGAGGGACGCGGCGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: APQVKVPGAKRPGLA*SRRLTQARGTRRAS
Trigger: GGAGGCGCGCCGCGTCCCTCGGGCCTGGGTGAGGCGGCGGCTCCAGGCAAGACCCGGTCGTTTCGCCCCCGGGACTTTTACTTGCGGAGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS CCA 90 bp GTGCCGCGAGCTCTCCAAGACCCCGCGCGCTCTGCGCTTCACGGGTaGCTCGGGCGGAGGCAGCAGGACCACGGGTCTGGCCGTGCCGAA +
Preference number: 5 (lower is better)
Translates to: VPRALQDPARSALHG*LGRRQQDHGSGRAE
Trigger: TTCGGCACGGCCAGACCCGTGGTCCTGCTGCCTCCGCCCGAGCCACCCGTGAAGCGCAGAGCGCGCGGGGTCTTGGAGAGCTCGCGGCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS GCA 90 bp ATCTCTTCGATGGACGTGGGGATCACGCGGGAGGGCAGCAGCGCCTaGCAGGCGGCCTCCCGCGCGTCGCTGGGCGGCCAGCTCTCCTGT +
Preference number: 5 (lower is better)
Translates to: ISSMDVGITREGSSA*QAASRASLGGQLSC
Trigger: ACAGGAGAGCTGGCCGCCCAGCGACGCGCGGGAGGCCGCCTGGCAGGCGCTGCTGCCCTCCCGCGTGATCCCCACGTCCATCGAAGAGAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS GCA 90 bp TGTTCGCGCTCCCTTCCCAAGTGGAAGACCCGCCTGGGAGCCGCGTaGCGCGAGCTCTCCAAGACCCCGCGCGCTCTGCGCTTCACGGGT +
Preference number: 5 (lower is better)
Translates to: CSRSLPKWKTRLGAA*RELSKTPRALRFTG
Trigger: ACCCGTGAAGCGCAGAGCGCGCGGGGTCTTGGAGAGCTCGCGGCACGCGGCTCCCAGGCGGGTCTTCCACTTGGGAAGGGAGCGCGAACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS GCA 90 bp CCGCTTCCCGCGCCTCGCGGGCCCCGCTCTCGCTCACGAAGTTGCTaGGGATCCTCACTTTCCTCCGCCCGCTGCTGGCCTCCATGTAGC +
Preference number: 5 (lower is better)
Translates to: PLPAPRGPRSRSRSC*GSSLSSARCWPPCS
Trigger: GCTACATGGAGGCCAGCAGCGGGCGGAGGAAAGTGAGGATCCGCAGCAACTTCGTGAGCGAGAGCGGGGCCCGCGAGGCGCGGGAAGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS CCA 90 bp GCGAGAGGAGCTACCTCCTGGCTCTGTTCGCGCTCCCTTCCCAAGTaGAAGACCCGCCTGGGAGCCGCGTGCCGCGAGCTCTCCAAGACC +
Preference number: 5 (lower is better)
Translates to: ARGATSWLCSRSLPK*KTRLGAACRELSKT
Trigger: GGTCTTGGAGAGCTCGCGGCACGCGGCTCCCAGGCGGGTCTTCCACTTGGGAAGGGAGCGCGAACAGAGCCAGGAGGTAGCTCCTCTCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS TCA 90 bp TTTGACCCGGCATCGAGGGCGCCTCCGCTCCAATTCAGGTGGCGGTaGGCTTGGCCCCGCCGCTCGGCGAGTGTCCAACAGGCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: FDPASRAPPLQFRWR*AWPRRSASVQQAFP
Trigger: AGGAAAGGCCTGTTGGACACTCGCCGAGCGGCGGGGCCAAGCTCACCGCCACCTGAATTGGAGCGGAGGCGCCCTCGATGCCGGGTCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS GCA 90 bp CCTCACTTTCCTCCGCCCGCTGCTGGCCTCCATGTAGCCGTCCTCTaGGGAGACGGAGCTGGCCTTCCTCTCTTTGGCCATGCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: PHFPPPAAGLHVAVL*GDGAGLPLFGHAGP
Trigger: GGGCCCTGCATGGCCAAAGAGAGGAAGGCCAGCTCCGTCTCCGCAGAGGACGGCTACATGGAGGCCAGCAGCGGGCGGAGGAAAGTGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS CCA 90 bp GCCCGCTGCTGGCCTCCATGTAGCCGTCCTCTGCGGAGACGGAGCTaGCCTTCCTCTCTTTGGCCATGCAGGGCCCTGCGAGAGGAGCTA +
Preference number: 5 (lower is better)
Translates to: ARCWPPCSRPLRRRS*PSSLWPCRALREEL
Trigger: TAGCTCCTCTCGCAGGGCCCTGCATGGCCAAAGAGAGGAAGGCCAGCTCCGTCTCCGCAGAGGACGGCTACATGGAGGCCAGCAGCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS TCA 90 bp GGGTCCTACGCCCACGGAGTCTCCCTGATTGCTAGCACGGCAGTCTaGGATCAAACTGCAAGGCGGCAGCGAGGCTGGGGAAGGGGCGCC +
Preference number: 5 (lower is better)
Translates to: GSYAHGVSLIASTAV*DQTARRQRGWGRGA
Trigger: GGCGCCCCTTCCCCAGCCTCGCTGCCGCCTTGCAGTTTGATCTCAGACTGCCGTGCTAGCAATCAGGGAGACTCCGTGGGCGTAGGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476979.5
CDS GCA 90 bp AGCCGTCCTCTGCGGAGACGGAGCTGGCCTTCCTCTCTTTGGCCATaGAGGGCCCTGCGAGAGGAGCTACCTCCTGGCTCTGTTCGCGCT +
Preference number: 5 (lower is better)
Translates to: SRPLRRRSWPSSLWP*RALREELPPGSVRA
Trigger: AGCGCGAACAGAGCCAGGAGGTAGCTCCTCTCGCAGGGCCCTGCATGGCCAAAGAGAGGAAGGCCAGCTCCGTCTCCGCAGAGGACGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS CCA 90 bp CGCTCACGAAGTTGCTGCGGATCCTCACTTTCCTCCGCCCGCTGCTaGCCTCCATGTAGCCGTCCTCTGCGGAGACGGAGCTGGCCTTCC +
Preference number: 5 (lower is better)
Translates to: RSRSCCGSSLSSARC*PPCSRPLRRRSWPS
Trigger: GGAAGGCCAGCTCCGTCTCCGCAGAGGACGGCTACATGGAGGCCAGCAGCGGGCGGAGGAAAGTGAGGATCCGCAGCAACTTCGTGAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS GCA 90 bp TGCGGAGACGGAGCTGGCCTTCCTCTCTTTGGCCATGCAGGGCCCTaGGAGAGGAGCTACCTCCTGGCTCTGTTCGCGCTCCCTTCCCAA +
Preference number: 5 (lower is better)
Translates to: CGDGAGLPLFGHAGP*ERSYLLALFALPSQ
Trigger: TTGGGAAGGGAGCGCGAACAGAGCCAGGAGGTAGCTCCTCTCGCAGGGCCCTGCATGGCCAAAGAGAGGAAGGCCAGCTCCGTCTCCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS GCA 90 bp TCTCGCTCACGAAGTTGCTGCGGATCCTCACTTTCCTCCGCCCGCTaGTGGCCTCCATGTAGCCGTCCTCTGCGGAGACGGAGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: SRSRSCCGSSLSSAR*WPPCSRPLRRRSWP
Trigger: AGGCCAGCTCCGTCTCCGCAGAGGACGGCTACATGGAGGCCAGCAGCGGGCGGAGGAAAGTGAGGATCCGCAGCAACTTCGTGAGCGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS CCA 90 bp TTCCTCTCTTTGGCCATGCAGGGCCCTGCGAGAGGAGCTACCTCCTaGCTCTGTTCGCGCTCCCTTCCCAAGTGGAAGACCCGCCTGGGA +
Preference number: 5 (lower is better)
Translates to: FLSLAMQGPARGATS*LCSRSLPKWKTRLG
Trigger: TCCCAGGCGGGTCTTCCACTTGGGAAGGGAGCGCGAACAGAGCCAGGAGGTAGCTCCTCTCGCAGGGCCCTGCATGGCCAAAGAGAGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS CCA 90 bp CCATGTAGCCGTCCTCTGCGGAGACGGAGCTGGCCTTCCTCTCTTTaGCCATGCAGGGCCCTGCGAGAGGAGCTACCTCCTGGCTCTGTT +
Preference number: 5 (lower is better)
Translates to: PCSRPLRRRSWPSSL*PCRALREELPPGSV
Trigger: AACAGAGCCAGGAGGTAGCTCCTCTCGCAGGGCCCTGCATGGCCAAAGAGAGGAAGGCCAGCTCCGTCTCCGCAGAGGACGGCTACATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS-3UTR CAA 90 bp AGCAGTGTGATACACTCGAGAAGCCAGGCGCAAGTCAACAGGCAGCTCCTGGGCCGAAACGACCGGGTCTaGCCTGGAGCCGCCGCCTCA +
Preference number: 5 (lower is better)
Translates to: SSVIHSRSQAQVNRQLLGRNDRV*PGAAAS
Trigger: TGAGGCGGCGGCTCCAGGCAAGACCCGGTCGTTTCG...GCCCAGGAGCTGCCTGTTGACTTGCGCCTGGCTTCTCGAGTGTATCACACTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS GCA 90 bp ATGAGCTCTTTGATGGTCTGGTCGGAGGCCAGCTGGGCCTCGGACTaGAGAGAGGCGATGATCTCTTCGATGGACGTGGGGATCACGCGG +
Preference number: 5 (lower is better)
Translates to: MSSLMVWSEASWASD*REAMISSMDVGITR
Trigger: CCGCGTGATCCCCACGTCCATCGAAGAGATCATCGCCTCTCTGCAGTCCGAGGCCCAGCTGGCCTCCGACCAGACCATCAAAGAGCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS CCA 90 bp AGGACGCTCCGTATGAGCTCTTTGATGGTCTGGTCGGAGGCCAGCTaGGCCTCGGACTGCAGAGAGGCGATGATCTCTTCGATGGACGTG +
Preference number: 5 (lower is better)
Translates to: RTLRMSSLMVWSEAS*ASDCREAMISSMDV
Trigger: CACGTCCATCGAAGAGATCATCGCCTCTCTGCAGTCCGAGGCCCAGCTGGCCTCCGACCAGACCATCAAAGAGCTCATACGGAGCGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS-3UTR CAA 90 bp GAACTCAGTGATCCAAATGTTGAAGGATTTACCACCACAATTGCCAGAAATAGCCAGGTGGCGGTGAGCTaGGCCCCGCCGCTCGGCGAG +
Preference number: 5 (lower is better)
Translates to: ELSDPNVEGFTTTIARNSQVAVS*APPLGE
Trigger: CTCGCCGAGCGGCGGGGCCAAGCTCACCGCCACCTG...GCTATTTCTGGCAATTGTGGTGGTAAATCCTTCAACATTTGGATCACTGAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CAA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTCTGGCCTTCCTCTCTTaGGCCATGCAGGGCCCTGCG +
Preference number: 5 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCLAFLS*AMQGPA
Trigger: CGCAGGGCCCTGCATGGCCAAAGAGAGGAAGGCCAG...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CAA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTCGAAACGACCGGGTCTaGCCTGGAGCCGCCGCCTCA +
Preference number: 5 (lower is better)
Translates to: MVEPFRQQICFRFRENSCRNDRV*PGAAAS
Trigger: TGAGGCGGCGGCTCCAGGCAAGACCCGGTCGTTTCG...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CAA 90 bp AGCAGTGTGATACACTCGAGAAGCCAGGCGCAAGTCAACAGGCAGCTCCTGGGCCTTTGCATATCATTCTaGATTTCCAAAGGAGCTATG +
Preference number: 5 (lower is better)
Translates to: SSVIHSRSQAQVNRQLLGLCISF*ISKGAM
Trigger: CATAGCTCCTTTGGAAATCAAGAATGATATGCAAAG...GCCCAGGAGCTGCCTGTTGACTTGCGCCTGGCTTCTCGAGTGTATCACACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS GCA 90 bp CTGTGGACTGGGCTTTCATCTACAGCCGGCTTGGAGGCCAACTTCTaGTTGAATCGGAGAAAATCCTTTTTAGTTTCCTGCCGAACTTTC +
Preference number: 5 (lower is better)
Translates to: LWTGLSSTAGLEANF*LNRRKSFLVSCRTF
Trigger: GAAAGTTCGGCAGGAAACTAAAAAGGATTTTCTCCGATTCAAGCAGAAGTTGGCCTCCAAGCCGGCTGTAGATGAAAGCCCAGTCCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000533625.5
ENST00000553443.5
ENST00000556845.1
CDS-3UTR CAA 90 bp ATCTTCATTAAACCTATGGCTGGAGATGGACGGCGGCCTTCCTATCCAGTAGAGGGGATTGTGGACATCTaGACAAATTTGACCCGGCAT +
Preference number: 5 (lower is better)
Translates to: IFIKPMAGDGRRPSYPVEGIVDI*TNLTRH
Trigger: ATGCCGGGTCAAATTTGTCAAGATGTCCACAATCCC...CTCTACTGGATAGGAAGGCCGCCGTCCATCTCCAGCCATAGGTTTAATGAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CAA 90 bp TTTATTTTGCTTAGTGAGCTGGAGCTGACGTTTCAATTCCTTTGCTTTCTGAAACTGGCCTTCCTCTCTTaGGCCATGCAGGGCCCTGCG +
Preference number: 5 (lower is better)
Translates to: FILLSELELTFQFLCFLKLAFLS*AMQGPA
Trigger: CGCAGGGCCCTGCATGGCCAAAGAGAGGAAGGCCAG...TTTCAGAAAGCAAAGGAATTGAAACGTCAGCTCCAGCTCACTAAGCAAAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS TCA 90 bp GGCTTCCAGCTCCATCCACGTCCCTTGGTTCTCTTGGCCTTCATTTaGACTTTTGCTAATAGAGCACACATGGTCATCTCAGCTCTATTC +
Preference number: 5 (lower is better)
Translates to: GFQLHPRPLVLLAFI*TFANRAHMVISALF
Trigger: GAATAGAGCTGAGATGACCATGTGTGCTCTATTAGCAAAAGTTCAAATGAAGGCCAAGAGAACCAAGGGACGTGGATGGAGCTGGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554555.1
CDS-3UTR CAA 90 bp ATCTTCATTAAACCTATGGCTGGAGATGGACGGCGGCCTTCCTATCCAGTAGAGAGAGATTTTGGAGGCTaGGATAACTCTTCATGCACG +
Preference number: 5 (lower is better)
Translates to: IFIKPMAGDGRRPSYPVERDFGG*DNSSCT
Trigger: CGTGCATGAAGAGTTATCCAAGCCTCCAAAATCTCT...CTCTACTGGATAGGAAGGCCGCCGTCCATCTCCAGCCATAGGTTTAATGAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CAA 90 bp ACCTCGAGGAATCTTTCAAGAGATTTTGGAGGCTTGGATAACTCTTCATGCACGCTGCGTCAGTGGTTCTaGTTCAGACCTCGAGGAATC +
Preference number: 5 (lower is better)
Translates to: TSRNLSRDFGGLDNSSCTLRQWF*FRPRGI
Trigger: GATTCCTCGAGGTCTGAACAAGAACCACTGACGCAG...CGTGCATGAAGAGTTATCCAAGCCTCCAAAATCTCTTGAAAGATTCCTCGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CAA 90 bp TTGTTCAGACCTCGAGGAATCTTTCAAGAGATTTTGGAGGCTTGGATAACTCTTTCATCTACAGCCGGCTaGGAGGCCAACTTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: LFRPRGIFQEILEAWITLSSTAG*EANFCL
Trigger: CAAGCAGAAGTTGGCCTCCAAGCCGGCTGTAGATGA...AAGAGTTATCCAAGCCTCCAAAATCTCTTGAAAGATTCCTCGAGGTCTGAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CAA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTTCATCTACAGCCGGCTaGGAGGCCAACTTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCSSTAG*EANFCL
Trigger: CAAGCAGAAGTTGGCCTCCAAGCCGGCTGTAGATGA...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CAA 90 bp ATTCCAAAACAACTTCGTGAATTCTGGATAAGCATACATTTCCTCTCCCAAGACCTCCGTATGAGCTCTTaGATGGTCTGGTCGGAGGCC +
Preference number: 5 (lower is better)
Translates to: IPKQLREFWISIHFLSQDLRMSS*MVWSEA
Trigger: GGCCTCCGACCAGACCATCAAAGAGCTCATACGGAG...GTCTTGGGAGAGGAAATGTATGCTTATCCAGAATTCACGAAGTTGTTTTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS TCA 90 bp AGACAGTCTGCTGAAATTGCTGTGGCATCTGGTCCTTTATCAGAATaGGAAATGGCATCCAAAGCCTTCTTAAGCACTTCCACAGCTTCC +
Preference number: 5 (lower is better)
Translates to: RQSAEIAVASGPLSE*EMASKAFLSTSTAS
Trigger: GGAAGCTGTGGAAGTGCTTAAGAAGGCTTTGGATGCCATTTCTCATTCTGATAAAGGACCAGATGCCACAGCAATTTCAGCAGACTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS GCA 90 bp TGTTCAGCTCCCATTTATAACATGCAGGGCTTGGTTTTCTGTTTCTaGATTAGTTTGCTGAGGATAATGGCTTCCAGCTCCATCCACGTC +
Preference number: 5 (lower is better)
Translates to: CSAPIYNMQGLVFCF*ISLLRIMASSSIHV
Trigger: GACGTGGATGGAGCTGGAAGCCATTATCCTCAGCAAACTAATGCAGAAACAGAAAACCAAGCCCTGCATGTTATAAATGGGAGCTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554555.1
CDS-3UTR CAA 90 bp TTAGGCTTCAAAGACAGGGCTTTATTAAGGTCTTCCTCAGCTAGTTCATATTGCCTCCTGAAGAGAAGGTaGCACCCCCAGTTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: LGFKDRALLRSSSASSYCLLKRR*HPQFSE
Trigger: TTCTGAGAACTGGGGGTGCAACCTTCTCTTCAGGAG...GCAATATGAACTAGCTGAGGAAGACCTTAATAAAGCCCTGTCTTTGAAGCCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478811.6
CDS-3UTR CAA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACCTCCGTATGAGCTCTTaGATGGTCTGGTCGGAGGCC +
Preference number: 5 (lower is better)
Translates to: PFRQQICFRFRENSCVNYLRMSS*MVWSEA
Trigger: GGCCTCCGACCAGACCATCAAAGAGCTCATACGGAG...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CAA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTTTCAGGTGGTATCCCTaGCGGTGTCGGAGGAATATG +
Preference number: 5 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCFRWYP*RCRRNM
Trigger: CATATTCCTCCGACACCGCAAGGGATACCACCTGAA...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS TCA 90 bp GATTCCGTCCAAGACCTCAATGGCCTTGTCATGGTTTTCACAAAATaGATAAATAAGGGCTTGCTGCATAGGACTCAACTCACTGAGACC +
Preference number: 5 (lower is better)
Translates to: DSVQDLNGLVMVFTK*INKGLLHRTQLTET
Trigger: GGTCTCAGTGAGTTGAGTCCTATGCAGCAAGCCCTTATTTATTCATTTTGTGAAAACCATGACAAGGCCATTGAGGTCTTGGACGGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
ENST00000554555.1
CDS TCA 90 bp CTTTTGCTAATAGAGCACACATGGTCATCTCAGCTCTATTCCAGCTaGTTCCGTCCAAGACCTCAATGGCCTTGTCATGGTTTTCACAAA +
Preference number: 5 (lower is better)
Translates to: LLLIEHTWSSQLYSS*FRPRPQWPCHGFHK
Trigger: TTTGTGAAAACCATGACAAGGCCATTGAGGTCTTGGACGGAATCAGCTGGAATAGAGCTGAGATGACCATGTGTGCTCTATTAGCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
ENST00000554555.1
CDS TCA 90 bp GCCTTCCTCCATGTAACAAAGACCCAAGTTATACAGACAGTCTGCTaGAATTGCTGTGGCATCTGGTCCTTTATCAGAATGAGAAATGGC +
Preference number: 5 (lower is better)
Translates to: AFLHVTKTQVIQTVC*NCCGIWSFIRMRNG
Trigger: GCCATTTCTCATTCTGATAAAGGACCAGATGCCACAGCAATTTCAGCAGACTGTCTGTATAACTTGGGTCTTTGTTACATGGAGGAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS GCA 90 bp GATTCCATCTGGCTGAAGGTGGATAGCACGAGACAATTCATTTACTaGCTTTTTCAATTTATGCAACTGGAAAATCCGTTCGCTCCCACC +
Preference number: 5 (lower is better)
Translates to: DSIWLKVDSTRQFIY*LFQFMQLENPFAPT
Trigger: GGTGGGAGCGAACGGATTTTCCAGTTGCATAAATTGAAAAAGGCAGTAAATGAATTGTCTCGTGCTATCCACCTTCAGCCAGATGGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476979.5
CDS CCA 90 bp AAGTGTGCGTTAAAGACACCCACTTGGCTTCTTTTGAATCACTTGTaGGCTGTCCATCTTCCAAAGGTTTACTTAATTCCTCTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: KCALKTPTWLLLNHL*AVHLPKVYLIPLLA
Trigger: AGCCAGCAGAGGAATTAAGTAAACCTTTGGAAGATGGACAGCCCACAAGTGATTCAAAAGAAGCCAAGTGGGTGTCTTTAACGCACACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CAA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTGACAGTCTGCTGAAATaGCTGTGGCATCTGGTCCTT +
Preference number: 5 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCDSLLK*LWHLVL
Trigger: AAGGACCAGATGCCACAGCAATTTCAGCAGACTGTC...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR CAA 90 bp ACCTCGAGGAATCTTTCAAGAGATTTTGGAGGCTTGGATAACTCTTCATGCACGGAGGCCAACTTCTGCTaGAATCGGAGAAAATCCTTT +
Preference number: 5 (lower is better)
Translates to: TSRNLSRDFGGLDNSSCTEANFC*NRRKSF
Trigger: AAAGGATTTTCTCCGATTCAAGCAGAAGTTGGCCTC...CGTGCATGAAGAGTTATCCAAGCCTCCAAAATCTCTTGAAAGATTCCTCGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CAA 90 bp TCAGTGGTTCTTGTTCAGACCTCGAGGAATCTTTCAAGAGATTTTGGAGGCTTGCTTCTTTTGAATCACTaGTGGGCTGTCCATCTTCCA +
Preference number: 5 (lower is better)
Translates to: SVVLVQTSRNLSRDFGGLLLLNH*WAVHLP
Trigger: TGGAAGATGGACAGCCCACAAGTGATTCAAAAGAAG...CAAGCCTCCAAAATCTCTTGAAAGATTCCTCGAGGTCTGAACAAGAACCACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CAA 90 bp TTCAGAGGTAGAAGATTTCAGGGACAGAGCAATGTCAACAGGAACCCAAGATTTACGCTCTCTAGTTCCTaGTGCCAATTCAGGTGGTAT +
Preference number: 5 (lower is better)
Translates to: FRGRRFQGQSNVNRNPRFTLSSS*CQFRWY
Trigger: ATACCACCTGAATTGGCACAAGGAACTAGAGAGCGT...AAATCTTGGGTTCCTGTTGACATTGCTCTGTCCCTGAAATCTTCTACCTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS CCA 90 bp ATTTTGCCGTTAAAGACACCCACTTGGCTTCTTTTGAATCACTTGTaGGCTGTCCATCTTCCAAAGGTTTACTTAATTCCTCTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: ILPLKTPTWLLLNHL*AVHLPKVYLIPLLA
Trigger: AGCCAGCAGAGGAATTAAGTAAACCTTTGGAAGATGGACAGCCCACAAGTGATTCAAAAGAAGCCAAGTGGGTGTCTTTAACGGCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CAA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTACTTCCACAGCTTCCTaGGTTCTCTTGGCCTTCATT +
Preference number: 5 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCTSTAS*VLLAFI
Trigger: AATGAAGGCCAAGAGAACCAAGGAAGCTGTGGAAGT...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR CAA 90 bp CTCATAACAAGAAATTCAGAGGTAGAAGATTTCAGGGACAGAGCAATGTCAACACTTATGCACGCTCATTaGCGATTCCTCAGCACCCAT +
Preference number: 5 (lower is better)
Translates to: LITRNSEVEDFRDRAMSTLMHAH*RFLSTH
Trigger: ATGGGTGCTGAGGAATCGCAAATGAGCGTGCATAAG...TGTTGACATTGCTCTGTCCCTGAAATCTTCTACCTCTGAATTTCTTGTTATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CAA 90 bp CGAGGAATCTTTCAAGAGATTTTGGAGGCTTGGATAACTCTTCATGCACGAATACTCTGCTGGCTGAACTaGCGAAATTTCCTGAGGTTT +
Preference number: 5 (lower is better)
Translates to: RGIFQEILEAWITLHARILCWLN*RNFLRF
Trigger: AAACCTCAGGAAATTTCGCAAGTTCAGCCAGCAGAG...TATTCGTGCATGAAGAGTTATCCAAGCCTCCAAAATCTCTTGAAAGATTCCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CAA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTCTCTGCTGGCTGAACTaGCGAAATTTCCTGAGGTTT +
Preference number: 5 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCLCWLN*RNFLRF
Trigger: AAACCTCAGGAAATTTCGCAAGTTCAGCCAGCAGAG...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CAA 90 bp TTGGTCCTCTGGTTAGTGTTATTCAAATGCATCCAGGAACTGATAAAACTTCTCCCCACTTGGCTTCTTTaGAATCACTTGTGGGCTGTC +
Preference number: 5 (lower is better)
Translates to: LVLWLVLFKCIQELIKLLPTWLL*NHLWAV
Trigger: GACAGCCCACAAGTGATTCAAAAGAAGCCAAGTGGG...GAGAAGTTTTATCAGTTCCTGGATGCATTTGAATAACACTAACCAGAGGACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS GCA 90 bp TTCTGCTGTAGTACTGATCTTCATGGCAGCATTAATATCCTGCATTaGAGCAAAATTATTACCCATCTGAAGACAGACCACAGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: FCCSTDLHGSINILH*SKIITHLKTDHSSS
Trigger: GGAAGAGCTGTGGTCTGTCTTCAGATGGGTAATAATTTTGCTGCAATGCAGGATATTAATGCTGCCATGAAGATCAGTACTACAGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS GCA 90 bp AGGTGGATAGCACGAGACAATTCATTTACTGCCTTTTTCAATTTATaGAACTGGAAAATCCGTTCGCTCCCACCTGCATACTGCACTTTT +
Preference number: 5 (lower is better)
Translates to: RWIARDNSFTAFFNL*NWKIRSLPPAYCTF
Trigger: AAAAGTGCAGTATGCAGGTGGGAGCGAACGGATTTTCCAGTTGCATAAATTGAAAAAGGCAGTAAATGAATTGTCTCGTGCTATCCACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476979.5
CDS CCA 90 bp TGTAACAAAGACCCAAGTTATACAGACAGTCTGCTGAAATTGCTGTaGCATCTGGTCCTTTATCAGAATGAGAAATGGCATCCAAAGCCT +
Preference number: 5 (lower is better)
Translates to: CNKDPSYTDSLLKLL*HLVLYQNEKWHPKP
Trigger: AGGCTTTGGATGCCATTTCTCATTCTGATAAAGGACCAGATGCCACAGCAATTTCAGCAGACTGTCTGTATAACTTGGGTCTTTGTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS CCA 90 bp GTCCCCATTCTATATCCTCTTGTTCAATCTGGAGAATACTTGACATaGTTTCAGAAAGTTCCTTATGCACGCTCATTTGCGATTCCTCAG +
Preference number: 5 (lower is better)
Translates to: VPILYPLVQSGEYLT*FQKVPYARSFAIPQ
Trigger: CTGAGGAATCGCAAATGAGCGTGCATAAGGAACTTTCTGAAACCATGTCAAGTATTCTCCAGATTGAACAAGAGGATATAGAATGGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS-3UTR CAA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTACTTCCACAGCTTCCTaGGTTCTCTTGGCCTTCATT +
Preference number: 5 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSTSTAS*VLLAFI
Trigger: AATGAAGGCCAAGAGAACCAAGGAAGCTGTGGAAGT...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR CAA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACGACAGTCTGCTGAAATaGCTGTGGCATCTGGTCCTT +
Preference number: 5 (lower is better)
Translates to: PFRQQICFRFRENSCVNYDSLLK*LWHLVL
Trigger: AAGGACCAGATGCCACAGCAATTTCAGCAGACTGTC...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR CAA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTAAAGTCTTTCTGTGCTaGCTTGGTGGCTTCATCATG +
Preference number: 5 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCKVFLC*LGGFIM
Trigger: CATGATGAAGCCACCAAGCAAGCACAGAAAGACTTT...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR CAA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTCTTGGTAGTCTTTCATaGCATTCTGTTTGTGGCCCA +
Preference number: 5 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCLGSLS*HSVCGP
Trigger: TGGGCCACAAACAGAATGCAATGAAAGACTACCAAG...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR CAA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACCTTATGCACGCTCATTaGCGATTCCTCAGCACCCAT +
Preference number: 5 (lower is better)
Translates to: PFRQQICFRFRENSCVNYLMHAH*RFLSTH
Trigger: ATGGGTGCTGAGGAATCGCAAATGAGCGTGCATAAG...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CAA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTCCCACTTGGCTTCTTTaGAATCACTTGTGGGCTGTC +
Preference number: 5 (lower is better)
Translates to: MVEPFRQQICFRFRENSCPTWLL*NHLWAV
Trigger: GACAGCCCACAAGTGATTCAAAAGAAGCCAAGTGGG...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CAA 90 bp CTCTGGTTAGTGTTATTCAAATGCATCCAGGAACTGATAAAACTTCTCAAACAATTCAGGTGGTATCCCTaGCGGTGTCGGAGGAATATG +
Preference number: 5 (lower is better)
Translates to: LWLVLFKCIQELIKLLKQFRWYP*RCRRNM
Trigger: CATATTCCTCCGACACCGCAAGGGATACCACCTGAA...TTGTTTGAGAAGTTTTATCAGTTCCTGGATGCATTTGAATAACACTAACCAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CAA 90 bp TTGGTCCTCTGGTTAGTGTTATTCAAATGCATCCAGGAACTGATAAAACTTCTCCAAGTTTCCTTGCCTTaGAGAGTAGAAGAGGACCTG +
Preference number: 5 (lower is better)
Translates to: LVLWLVLFKCIQELIKLLQVSLP*RVEEDL
Trigger: CAGGTCCTCTTCTACTCTCAAAGGCAAGGAAACTTG...GAGAAGTTTTATCAGTTCCTGGATGCATTTGAATAACACTAACCAGAGGACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS TCA 90 bp AAGATGGCTGCAGCAATTCTGAGGTTCTCATCTCATGCCAAAAATTaGCTAGTGTTCCTTGCACTGGGAGTAGATTCATATAGAATACAC +
Preference number: 5 (lower is better)
Translates to: KMAAAILRFSSHAKN*LVFLALGVDSYRIH
Trigger: GTGTATTCTATATGAATCTACTCCCAGTGCAAGGAACACTAGTCAATTTTTGGCATGAGATGAGAACCTCAGAATTGCTGCAGCCATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553887.1
CDS GCA 90 bp GATTCCATCTGGCTGAAGGTGGATAGCACGAGACAATTCATTTACTaGCTTTTTCAATTTATGCAACTTAAAATAGGTTTCCGCCCGACA +
Preference number: 5 (lower is better)
Translates to: DSIWLKVDSTRQFIY*LFQFMQLKIGFRPT
Trigger: TGTCGGGCGGAAACCTATTTTAAGTTGCATAAATTGAAAAAGGCAGTAAATGAATTGTCTCGTGCTATCCACCTTCAGCCAGATGGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CAA 90 bp TTCAAAGACAGGGCTTTATTAAGGTCTTCCTCAGCTAGTTCATATTGCTTTAAGACTTCCACAGCTTCCTaGGTTCTCTTGGCCTTCATT +
Preference number: 5 (lower is better)
Translates to: FKDRALLRSSSASSYCFKTSTAS*VLLAFI
Trigger: AATGAAGGCCAAGAGAACCAAGGAAGCTGTGGAAGT...CTTAAAGCAATATGAACTAGCTGAGGAAGACCTTAATAAAGCCCTGTCTTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478811.6
CDS-3UTR CAA 90 bp ATCTGTATACTGTTTAATACATTGTCAGCAAGGATTGATGAAAAGGTCAGTGACGACAGTCTGCTGAAATaGCTGTGGCATCTGGTCCTT +
Preference number: 5 (lower is better)
Translates to: ICILFNTLSARIDEKVSDDSLLK*LWHLVL
Trigger: AAGGACCAGATGCCACAGCAATTTCAGCAGACTGTC...GTCACTGACCTTTTCATCAATCCTTGCTGACAATGTATTAAACAGTATACAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476979.5
CDS-3UTR CAA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTAAAGTCTTTCTGTGCTaGCTTGGTGGCTTCATCATG +
Preference number: 5 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSKVFLC*LGGFIM
Trigger: CATGATGAAGCCACCAAGCAAGCACAGAAAGACTTT...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR CAA 90 bp TCAGCCATAGCTTCCTCAATCAGACCTATTTTACCACGAACTTTTGCTCTAAAAAAAGTCTTTCTGTGCTaGCTTGGTGGCTTCATCATG +
Preference number: 5 (lower is better)
Translates to: SAIASSIRPILPRTFALKKVFLC*LGGFIM
Trigger: CATGATGAAGCCACCAAGCAAGCACAGAAAGACTTT...TTTTAGAGCAAAAGTTCGTGGTAAAATAGGTCTGATTGAGGAAGCTATGGCTGA
41% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000478811.6
CDS-3UTR CAA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTTTTCTGGAATTTTCCTaGGGCCTGCAAATTATAGCC +
Preference number: 5 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCFLEFS*GLQIIA
Trigger: GGCTATAATTTGCAGGCCCAAGGAAAATTCCAGAAA...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR CAA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTAGGCTAGGTAGTTCTTaGGATCAGTATCTATGGCAA +
Preference number: 5 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCRLGSS*DQYLWQ
Trigger: TTGCCATAGATACTGATCCAAAGAACTACCTAGCCT...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR CAA 90 bp TCAGCCATAGCTTCCTCAATCAGACCTATTTTACCACGAACTTTTGCTCTAAAACTTGGTAGTCTTTCATaGCATTCTGTTTGTGGCCCA +
Preference number: 5 (lower is better)
Translates to: SAIASSIRPILPRTFALKLGSLS*HSVCGP
Trigger: TGGGCCACAAACAGAATGCAATGAAAGACTACCAAG...TTTTAGAGCAAAAGTTCGTGGTAAAATAGGTCTGATTGAGGAAGCTATGGCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478811.6
CDS-3UTR CAA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTTGGTAGTCTTTCATaGCATTCTGTTTGTGGCCCA +
Preference number: 5 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSLGSLS*HSVCGP
Trigger: TGGGCCACAAACAGAATGCAATGAAAGACTACCAAG...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR CAA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTTCTTTTGAATCACTaGTGGGCTGTCCATCTTCCA +
Preference number: 5 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSLLLNH*WAVHLP
Trigger: TGGAAGATGGACAGCCCACAAGTGATTCAAAAGAAG...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CAA 90 bp ACCTCGAGGAATCTTTCAAGAGATTTTGGAGGCTTGGATAACTCTTCATGCACGTATCACAAAGAGGTTTaGAAGACTTTCTTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: TSRNLSRDFGGLDNSSCTYHKEV*KTFLVS
Trigger: TGAGACCAAGAAAGTCTTCAAAACCTCTTTGTGATA...CGTGCATGAAGAGTTATCCAAGCCTCCAAAATCTCTTGAAAGATTCCTCGAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CAA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACACGCTCTCTAGTTCCTaGTGCCAATTCAGGTGGTAT +
Preference number: 5 (lower is better)
Translates to: PFRQQICFRFRENSCVNYTLSSS*CQFRWY
Trigger: ATACCACCTGAATTGGCACAAGGAACTAGAGAGCGT...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CAA 90 bp ATTCCAAAACAACTTCGTGAATTCTGGATAAGCATACATTTCCTCTCCCAAGACCTCCTCAGTTTTATTTaGCTTAGTGAGCTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: IPKQLREFWISIHFLSQDLLSFI*LSELEL
Trigger: CAGCTCCAGCTCACTAAGCAAAATAAAACTGAGGAG...GTCTTGGGAGAGGAAATGTATGCTTATCCAGAATTCACGAAGTTGTTTTGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CAA 90 bp TCAGTGGTTCTTGTTCAGACCTCGAGGAATCTTTCAAGAGATTTTGGAGGCTTGATCTTTCAAGAGATTTaGGAGGCTTGGATAACTCTT +
Preference number: 5 (lower is better)
Translates to: SVVLVQTSRNLSRDFGGLIFQEI*EAWITL
Trigger: AAGAGTTATCCAAGCCTCCAAAATCTCTTGAAAGAT...CAAGCCTCCAAAATCTCTTGAAAGATTCCTCGAGGTCTGAACAAGAACCACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CAA 90 bp CTCATAACAAGAAATTCAGAGGTAGAAGATTTCAGGGACAGAGCAATGTCAACATGTGTTGTGACTAGCTaGGTCCTCTGGTTAGTGTTA +
Preference number: 5 (lower is better)
Translates to: LITRNSEVEDFRDRAMSTCVVTS*VLWLVL
Trigger: TAACACTAACCAGAGGACCAAGCTAGTCACAACACA...TGTTGACATTGCTCTGTCCCTGAAATCTTCTACCTCTGAATTTCTTGTTATGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CAA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTAGAATTCTGGTGATTTaGCCGTTAAAGACACCCACT +
Preference number: 5 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCRILVI*PLKTPT
Trigger: AGTGGGTGTCTTTAACGGCAAAATCACCAGAATTCT...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CAA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTTCCCTCGGTATGTCCTaGCTTGAGAATTTTGGTGAT +
Preference number: 5 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSSLGMS*LENFGD
Trigger: ATCACCAAAATTCTCAAGCAAGGACATACCGAGGGA...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS TCA 90 bp TATCATCTTTCTCTTTTACAGGTATGCTCGCATCTTTGTACTCAATaGGCCTATCAAGAGCCCATGTCCGAGGATCAATATTTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: YHLSLLQVCSHLCTQ*AYQEPMSEDQYFLE
Trigger: TTCCAGAAAATATTGATCCTCGGACATGGGCTCTTGATAGGCTCATTGAGTACAAAGATGCGAGCATACCTGTAAAAGAGAAAGATGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS GCA 90 bp GCCAAAACTAATTCTGGCTTTTATGTATGCTGGATTAATATGCAGTaGTTTCAGAAAGTCTTTCTGTGCTTGCTTGGTGGCTTCATCATG +
Preference number: 5 (lower is better)
Translates to: AKTNSGFYVCWINMQ*FQKVFLCLLGGFIM
Trigger: CATGATGAAGCCACCAAGCAAGCACAGAAAGACTTTCTGAAAGCACTGCATATTAATCCAGCATACATAAAAGCCAGAATTAGTTTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS GCA 90 bp GAGGCCAACTTCTGCTTGAATCGGAGAAAATCCTTTTTAGTTTCCTaGCGAACTTTCTCAAGCTCTTTAAACATATACGATTCCTCTTTG +
Preference number: 5 (lower is better)
Translates to: EANFCLNRRKSFLVS*RTFSSSLNIYDSSL
Trigger: CAAAGAGGAATCGTATATGTTTAAAGAGCTTGAGAAAGTTCGGCAGGAAACTAAAAAGGATTTTCTCCGATTCAAGCAGAAGTTGGCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000533625.5
ENST00000553443.5
ENST00000556845.1
CDS-3UTR CAA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTAAGACCTCAATGGCCTaGTCATGGTTTTCACAAAAT +
Preference number: 5 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCKTSMA*SWFSQN
Trigger: ATTTTGTGAAAACCATGACAAGGCCATTGAGGTCTT...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR CAA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTCCTTCATTTGAACTTTaGCTAATAGAGCACACATGG +
Preference number: 5 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCPSFEL*LIEHTW
Trigger: CCATGTGTGCTCTATTAGCAAAAGTTCAAATGAAGG...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR CAA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTGCCCAAGTAAAGAAATaGACAGCTTCTTCAAACTCA +
Preference number: 5 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCAQVKK*TASSNS
Trigger: TGAGTTTGAAGAAGCTGTCAATTTCTTTACTTGGGC...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR CAA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTAGAATCGAGCTATCCTaGTGGAGTTTCACTTTACAA +
Preference number: 5 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCRIELS*WSFTLQ
Trigger: TTGTAAAGTGAAACTCCACAAGGATAGCTCGATTCT...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382320.4
ENST00000478811.6
ENST00000553443.5
CDS-3UTR CAA 90 bp TTAGGCTTCAAAGACAGGGCTTTATTAAGGTCTTCCTCAGCTAGTTCATATTGCAGAATCGAGCTATCCTaGTGGAGTTTCACTTTACAA +
Preference number: 5 (lower is better)
Translates to: LGFKDRALLRSSSASSYCRIELS*WSFTLQ
Trigger: TTGTAAAGTGAAACTCCACAAGGATAGCTCGATTCT...GCAATATGAACTAGCTGAGGAAGACCTTAATAAAGCCCTGTCTTTGAAGCCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478811.6
CDS-3UTR CAA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACGAGGCCAACTTCTGCTaGAATCGGAGAAAATCCTTT +
Preference number: 5 (lower is better)
Translates to: PFRQQICFRFRENSCVNYEANFC*NRRKSF
Trigger: AAAGGATTTTCTCCGATTCAAGCAGAAGTTGGCCTC...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CAA 90 bp CGAGGAATCTTTCAAGAGATTTTGGAGGCTTGGATAACTCTTCATGCACGAATAGTTAAAGACACCCACTaGGCTTCTTTTGAATCACTT +
Preference number: 5 (lower is better)
Translates to: RGIFQEILEAWITLHARIVKDTH*ASFESL
Trigger: AAGTGATTCAAAAGAAGCCAAGTGGGTGTCTTTAAC...TATTCGTGCATGAAGAGTTATCCAAGCCTCCAAAATCTCTTGAAAGATTCCTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CAA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTCTCCTCAGTTTTATTTaGCTTAGTGAGCTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: MVEPFRQQICFRFRENSCLLSFI*LSELEL
Trigger: CAGCTCCAGCTCACTAAGCAAAATAAAACTGAGGAG...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CAA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTAGAGATTTTGGAGGCTaGGATAACTCTTCATGCACG +
Preference number: 5 (lower is better)
Translates to: MVEPFRQQICFRFRENSCRDFGG*DNSSCT
Trigger: CGTGCATGAAGAGTTATCCAAGCCTCCAAAATCTCT...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CAA 90 bp GAACTCAGTGATCCAAATGTTGAAGGATTTACCACCACAATTGCCAGAAATAGCTTGTATCCATCAGCCTaGATTTCCTCATCAGTCAAA +
Preference number: 5 (lower is better)
Translates to: ELSDPNVEGFTTTIARNSLYPSA*ISSSVK
Trigger: TTTGACTGATGAGGAAATCAAGGCTGATGGATACAA...GCTATTTCTGGCAATTGTGGTGGTAAATCCTTCAACATTTGGATCACTGAGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CAA 90 bp AAACAACTTCGTGAATTCTGGATAAGCATACATTTCCTCTCCCAAGACTTCCAAGATTTACCACCACAATaGCCAGAAATAGCATCTCAG +
Preference number: 5 (lower is better)
Translates to: KQLREFWISIHFLSQDFQDLPPQ*PEIASQ
Trigger: CTGAGATGCTATTTCTGGCAATTGTGGTGGTAAATC...TTGGAAGTCTTGGGAGAGGAAATGTATGCTTATCCAGAATTCACGAAGTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CAA 90 bp CGAGGAATCTTTCAAGAGATTTTGGAGGCTTGGATAACTCTTCATGCACGAATATCAGTGATCCAAATGTaGAAGGATTTACCACCACAA +
Preference number: 5 (lower is better)
Translates to: RGIFQEILEAWITLHARISVIQM*KDLPPQ
Trigger: TTGTGGTGGTAAATCCTTCAACATTTGGATCACTGA...TATTCGTGCATGAAGAGTTATCCAAGCCTCCAAAATCTCTTGAAAGATTCCTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CAA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGGTATGCTCGCATCTTaGTACTCAATGAGCCTATCA +
Preference number: 5 (lower is better)
Translates to: MVEPFRQQICFRFRENSCGMLAS*YSMSLS
Trigger: TGATAGGCTCATTGAGTACAAAGATGCGAGCATACC...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS TCA 90 bp AAGGTAAACTGGGACACCGTATTTGACGTTCATATAATGGAACTTTaGACAAATATTTCTTCTGTCCCGGAAGTATTCCATGAGATGCTG +
Preference number: 5 (lower is better)
Translates to: KVNWDTVFDVHIMEL*TNISSVPEVFHEML
Trigger: CAGCATCTCATGGAATACTTCCGGGACAGAAGAAATATTTGTTCAAAGTTCCATTATATGAACGTCAAATACGGTGTCCCAGTTTACCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS GCA 90 bp TATGTATGCTGGATTAATATGCAGTGCTTTCAGAAAGTCTTTCTGTaGTTGCTTGGTGGCTTCATCATGACCGTATTCCATGTAAGAATT +
Preference number: 5 (lower is better)
Translates to: YVCWINMQCFQKVFL*LLGGFIMTVFHVRI
Trigger: AATTCTTACATGGAATACGGTCATGATGAAGCCACCAAGCAAGCACAGAAAGACTTTCTGAAAGCACTGCATATTAATCCAGCATACATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR CAA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTAAGACCTCAATGGCCTaGTCATGGTTTTCACAAAAT +
Preference number: 5 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSKTSMA*SWFSQN
Trigger: ATTTTGTGAAAACCATGACAAGGCCATTGAGGTCTT...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR CAA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTTTCTGGAATTTTCCTaGGGCCTGCAAATTATAGCC +
Preference number: 5 (lower is better)
Translates to: PFRQQICFRFRENSCVNYFLEFS*GLQIIA
Trigger: GGCTATAATTTGCAGGCCCAAGGAAAATTCCAGAAA...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR CAA 90 bp TTCAAAGACAGGGCTTTATTAAGGTCTTCCTCAGCTAGTTCATATTGCTTTAAGTTTCTGGAATTTTCCTaGGGCCTGCAAATTATAGCC +
Preference number: 5 (lower is better)
Translates to: FKDRALLRSSSASSYCFKFLEFS*GLQIIA
Trigger: GGCTATAATTTGCAGGCCCAAGGAAAATTCCAGAAA...CTTAAAGCAATATGAACTAGCTGAGGAAGACCTTAATAAAGCCCTGTCTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478811.6
CDS-3UTR CAA 90 bp TTCAAAGACAGGGCTTTATTAAGGTCTTCCTCAGCTAGTTCATATTGCTTTAAGAGGCTAGGTAGTTCTTaGGATCAGTATCTATGGCAA +
Preference number: 5 (lower is better)
Translates to: FKDRALLRSSSASSYCFKRLGSS*DQYLWQ
Trigger: TTGCCATAGATACTGATCCAAAGAACTACCTAGCCT...CTTAAAGCAATATGAACTAGCTGAGGAAGACCTTAATAAAGCCCTGTCTTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478811.6
CDS-3UTR CAA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTAGGCTAGGTAGTTCTTaGGATCAGTATCTATGGCAA +
Preference number: 5 (lower is better)
Translates to: MVEPFRQQICFRFRENSCRLGSS*DQYLWQ
Trigger: TTGCCATAGATACTGATCCAAAGAACTACCTAGCCT...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR CAA 90 bp CTGTTTAATACATTGTCAGCAAGGATTGATGAAAAGGTCAGTGACACTTTTTCTCTTGGTAGTCTTTCATaGCATTCTGTTTGTGGCCCA +
Preference number: 5 (lower is better)
Translates to: LFNTLSARIDEKVSDTFSLGSLS*HSVCGP
Trigger: TGGGCCACAAACAGAATGCAATGAAAGACTACCAAG...AGAAAAAGTGTCACTGACCTTTTCATCAATCCTTGCTGACAATGTATTAAACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476979.5
CDS-3UTR CAA 90 bp GAACTCAGTGATCCAAATGTTGAAGGATTTACCACCACAATTGCCAGAAATAGCCAATCTGGAGAATACTaGACATGGTTTCAGAAAGTT +
Preference number: 5 (lower is better)
Translates to: ELSDPNVEGFTTTIARNSQSGEY*TWFQKV
Trigger: AACTTTCTGAAACCATGTCAAGTATTCTCCAGATTG...GCTATTTCTGGCAATTGTGGTGGTAAATCCTTCAACATTTGGATCACTGAGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CAA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTGTTAAAGACACCCACTaGGCTTCTTTTGAATCACTT +
Preference number: 5 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSVKDTH*ASFESL
Trigger: AAGTGATTCAAAAGAAGCCAAGTGGGTGTCTTTAAC...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CAA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTTATCACAAAGAGGTTTaGAAGACTTTCTTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCYHKEV*KTFLVS
Trigger: TGAGACCAAGAAAGTCTTCAAAACCTCTTTGTGATA...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CAA 90 bp GAACTCAGTGATCCAAATGTTGAAGGATTTACCACCACAATTGCCAGAAATAGCTGGACATATTCTTGGTaGTCATCCATAACAGGAATT +
Preference number: 5 (lower is better)
Translates to: ELSDPNVEGFTTTIARNSWTYSW*SSITGI
Trigger: AATTCCTGTTATGGATGACAACCAAGAATATGTCCA...GCTATTTCTGGCAATTGTGGTGGTAAATCCTTCAACATTTGGATCACTGAGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CAA 90 bp TTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTCTATGTTGGCCAGTACTTTGTTaGTTATTTCATACATCTCAC +
Preference number: 5 (lower is better)
Translates to: FRFRENSCVNYYSNHSLCWPVLC*LFHTSH
Trigger: GTGAGATGTATGAAATAACAAACAAAGTACTGGCCA...ACATAGACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CAA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTTCGGTATGTCCTTGCTaGAGAATTTTGGTGATCTAT +
Preference number: 5 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSSVCPC*RILVIY
Trigger: ATAGATCACCAAAATTCTCAAGCAAGGACATACCGA...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS GCA 90 bp TTGGGCCTGCAAATTATAGCCAAAACTAATTCTGGCTTTTATGTATaGTGGATTAATATGCAGTGCTTTCAGAAAGTCTTTCTGTGCTTG +
Preference number: 5 (lower is better)
Translates to: LGLQIIAKTNSGFYV*WINMQCFQKVFLCL
Trigger: CAAGCACAGAAAGACTTTCTGAAAGCACTGCATATTAATCCAGCATACATAAAAGCCAGAATTAGTTTTGGCTATAATTTGCAGGCCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS CCA 90 bp GGCCTGCAAATTATAGCCAAAACTAATTCTGGCTTTTATGTATGCTaGATTAATATGCAGTGCTTTCAGAAAGTCTTTCTGTGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: GLQIIAKTNSGFYVC*INMQCFQKVFLCLL
Trigger: AAGCAAGCACAGAAAGACTTTCTGAAAGCACTGCATATTAATCCAGCATACATAAAAGCCAGAATTAGTTTTGGCTATAATTTGCAGGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS-3UTR CAA 90 bp TTCAAAGACAGGGCTTTATTAAGGTCTTCCTCAGCTAGTTCATATTGCTTTAAGAAGACCTCAATGGCCTaGTCATGGTTTTCACAAAAT +
Preference number: 5 (lower is better)
Translates to: FKDRALLRSSSASSYCFKKTSMA*SWFSQN
Trigger: ATTTTGTGAAAACCATGACAAGGCCATTGAGGTCTT...CTTAAAGCAATATGAACTAGCTGAGGAAGACCTTAATAAAGCCCTGTCTTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478811.6
CDS-3UTR CAA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACAAGACCTCAATGGCCTaGTCATGGTTTTCACAAAAT +
Preference number: 5 (lower is better)
Translates to: PFRQQICFRFRENSCVNYKTSMA*SWFSQN
Trigger: ATTTTGTGAAAACCATGACAAGGCCATTGAGGTCTT...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR CAA 90 bp CTGTTTAATACATTGTCAGCAAGGATTGATGAAAAGGTCAGTGACACTTTTTCTAGGCTAGGTAGTTCTTaGGATCAGTATCTATGGCAA +
Preference number: 5 (lower is better)
Translates to: LFNTLSARIDEKVSDTFSRLGSS*DQYLWQ
Trigger: TTGCCATAGATACTGATCCAAAGAACTACCTAGCCT...AGAAAAAGTGTCACTGACCTTTTCATCAATCCTTGCTGACAATGTATTAAACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476979.5
CDS-3UTR CAA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACAGAATCGAGCTATCCTaGTGGAGTTTCACTTTACAA +
Preference number: 5 (lower is better)
Translates to: PFRQQICFRFRENSCVNYRIELS*WSFTLQ
Trigger: TTGTAAAGTGAAACTCCACAAGGATAGCTCGATTCT...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CAA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTTGCATAGGTGATGTTTaGAGGTACATTTTTCCCATT +
Preference number: 5 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSCIGDV*RYIFPI
Trigger: AATGGGAAAAATGTACCTCAAAACATCACCTATGCA...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CAA 90 bp AGTGATCCAAATGTTGAAGGATTTACCACCACAATTGCCAGAAATAGCATCTCACCATTCTATATCCTCTaGTTCAATCTGGAGAATACT +
Preference number: 5 (lower is better)
Translates to: SDPNVEGFTTTIARNSISPFYIL*FNLENT
Trigger: AGTATTCTCCAGATTGAACAAGAGGATATAGAATGG...TGAGATGCTATTTCTGGCAATTGTGGTGGTAAATCCTTCAACATTTGGATCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CAA 90 bp AGTGATCCAAATGTTGAAGGATTTACCACCACAATTGCCAGAAATAGCATCTCAGTTTTGAAGACTTTCTaGGTCTCAGTGATTTACGTT +
Preference number: 5 (lower is better)
Translates to: SDPNVEGFTTTIARNSISVLKTF*VSVIYV
Trigger: AACGTAAATCACTGAGACCAAGAAAGTCTTCAAAAC...TGAGATGCTATTTCTGGCAATTGTGGTGGTAAATCCTTCAACATTTGGATCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CAA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTGTTTTGAAGACTTTCTaGGTCTCAGTGATTTACGTT +
Preference number: 5 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSVLKTF*VSVIYV
Trigger: AACGTAAATCACTGAGACCAAGAAAGTCTTCAAAAC...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CAA 90 bp TTGGTCCTCTGGTTAGTGTTATTCAAATGCATCCAGGAACTGATAAAACTTCTCAATATGGACATATTCTaGGTTGTCATCCATAACAGG +
Preference number: 5 (lower is better)
Translates to: LVLWLVLFKCIQELIKLLNMDIF*VVIHNR
Trigger: CCTGTTATGGATGACAACCAAGAATATGTCCATATT...GAGAAGTTTTATCAGTTCCTGGATGCATTTGAATAACACTAACCAGAGGACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CAA 90 bp ATTCCAAAACAACTTCGTGAATTCTGGATAAGCATACATTTCCTCTCCCAAGACCAGTTAAAAGTCTGCTaGCTTGAACACTCTCATATT +
Preference number: 5 (lower is better)
Translates to: IPKQLREFWISIHFLSQDQLKVC*LEHSHI
Trigger: AATATGAGAGTGTTCAAGCAAGCAGACTTTTAACTG...GTCTTGGGAGAGGAAATGTATGCTTATCCAGAATTCACGAAGTTGTTTTGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CAA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTATCTTTCAAGAGATTTaGGAGGCTTGGATAACTCTT +
Preference number: 5 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSIFQEI*EAWITL
Trigger: AAGAGTTATCCAAGCCTCCAAAATCTCTTGAAAGAT...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CAA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACATATTTAATGACCTCTaGTGGAAGATCAGACTCCAC +
Preference number: 5 (lower is better)
Translates to: PFRQQICFRFRENSCVNYIFNDL*WKIRLH
Trigger: GTGGAGTCTGATCTTCCACAAGAGGTCATTAAATAT...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CAA 90 bp ATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACTATAGCAACCACAGTTTTCAAAGTCACAAATaGCCAGCAGCCAAAGTTTTA +
Preference number: 5 (lower is better)
Translates to: ICFRFRENSCVNYYSNHSFQSHK*PAAKVL
Trigger: TAAAACTTTGGCTGCTGGCAATTTGTGACTTTGAAA...ACTGTGGTTGCTATAGTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS TCA 90 bp AGAAGATATTGTCCTCTTCTTATGTATAATTGGATTCCATCTGGCTaGAGGTGGATAGCACGAGACAATTCATTTACTGCCTTTTTCAAT +
Preference number: 5 (lower is better)
Translates to: RRYCPLLMYNWIPSG*RWIARDNSFTAFFN
Trigger: ATTGAAAAAGGCAGTAAATGAATTGTCTCGTGCTATCCACCTTCAGCCAGATGGAATCCAATTATACATAAGAAGAGGACAATATCTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS-3UTR CAA 90 bp CTGTTTAATACATTGTCAGCAAGGATTGATGAAAAGGTCAGTGACACTTTTTCTGCCCAAGTAAAGAAATaGACAGCTTCTTCAAACTCA +
Preference number: 5 (lower is better)
Translates to: LFNTLSARIDEKVSDTFSAQVKK*TASSNS
Trigger: TGAGTTTGAAGAAGCTGTCAATTTCTTTACTTGGGC...AGAAAAAGTGTCACTGACCTTTTCATCAATCCTTGCTGACAATGTATTAAACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476979.5
CDS-3UTR CAA 90 bp AGAAAATCGAAGAACTCAGTGATCCAAATGTTGAAGGATTTACCACCACAATTGTGCATAGGTGATGTTTaGAGGTACATTTTTCCCATT +
Preference number: 5 (lower is better)
Translates to: RKSKNSVIQMLKDLPPQLCIGDV*RYIFPI
Trigger: AATGGGAAAAATGTACCTCAAAACATCACCTATGCA...CAATTGTGGTGGTAAATCCTTCAACATTTGGATCACTGAGTTCTTCGATTTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS-3UTR CAA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTCAATCTGGAGAATACTaGACATGGTTTCAGAAAGTT +
Preference number: 5 (lower is better)
Translates to: MVEPFRQQICFRFRENSCQSGEY*TWFQKV
Trigger: AACTTTCTGAAACCATGTCAAGTATTCTCCAGATTG...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CAA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACCCATTCTATATCCTCTaGTTCAATCTGGAGAATACT +
Preference number: 5 (lower is better)
Translates to: PFRQQICFRFRENSCVNYPFYIL*FNLENT
Trigger: AGTATTCTCCAGATTGAACAAGAGGATATAGAATGG...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CAA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTTGGACATATTCTTGGTaGTCATCCATAACAGGAATT +
Preference number: 5 (lower is better)
Translates to: MVEPFRQQICFRFRENSCWTYSW*SSITGI
Trigger: AATTCCTGTTATGGATGACAACCAAGAATATGTCCA...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CAA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTAATATGGACATATTCTaGGTTGTCATCCATAACAGG +
Preference number: 5 (lower is better)
Translates to: MVEPFRQQICFRFRENSCNMDIF*VVIHNR
Trigger: CCTGTTATGGATGACAACCAAGAATATGTCCATATT...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CAA 90 bp CCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTGTAAACTACCAGTTAAAAGTCTGCTaGCTTGAACACTCTCATATT +
Preference number: 5 (lower is better)
Translates to: PFRQQICFRFRENSCVNYQLKVC*LEHSHI
Trigger: AATATGAGAGTGTTCAAGCAAGCAGACTTTTAACTG...GTAGTTTACACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CAA 90 bp ATGGTAGAACCTTTTAGACAACAAATATGTTTCCGTTTCAGAGAGAACAGCTGTCTTTGCATATCATTCTaGATTTCCAAAGGAGCTATG +
Preference number: 5 (lower is better)
Translates to: MVEPFRQQICFRFRENSCLCISF*ISKGAM
Trigger: CATAGCTCCTTTGGAAATCAAGAATGATATGCAAAG...ACAGCTGTTCTCTCTGAAACGGAAACATATTTGTTGTCTAAAAGGTTCTACCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS-3UTR CAA 90 bp AGAAAATCGAAGAACTCAGTGATCCAAATGTTGAAGGATTTACCACCACAATTGAATCAGTTTGTCCAATaGTATCCATCAGCCTTGATT +
Preference number: 5 (lower is better)
Translates to: RKSKNSVIQMLKDLPPQLNQFVQ*YPSALI
Trigger: AATCAAGGCTGATGGATACAATTGGACAAACTGATT...CAATTGTGGTGGTAAATCCTTCAACATTTGGATCACTGAGTTCTTCGATTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS GCA 72 bp ATGGACGTGGGGATCACGCGGGAGGGCAGCAGCGCCTaGCAGGCGGCCTCCCGCGCGTCGCTGGGCGGCCAG +
Preference number: 6 (lower is better)
Translates to: MDVGITREGSSA*QAASRASLGGQ
Trigger: CTGGCCGCCCAGCGACGCGCGGGAGGCCGCCTGGCAGGCGCTGCTGCCCTCCCGCGTGATCCCCACGTCCAT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS CCA 72 bp CGCGCGTCGCTGGGCGGCCAGCTCTCCTGTTCTCCCTaGGCTCCTAACCCCGCCGCTTCCCGCGCCTCGCGG +
Preference number: 6 (lower is better)
Translates to: RASLGGQLSCSP*APNPAASRASR
Trigger: CCGCGAGGCGCGGGAAGCGGCGGGGTTAGGAGCCCAGGGAGAACAGGAGAGCTGGCCGCCCAGCGACGCGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS GCA 72 bp AGGCCCGAGGGACGCGGCGCGCCTCCGAGCACCTCCTaGAGGAGGGCGGCCGCGGACATCGCAGGGCCTTTA +
Preference number: 6 (lower is better)
Translates to: RPEGRGAPPSTS*RRAAADIAGPL
Trigger: TAAAGGCCCTGCGATGTCCGCGGCCGCCCTCCTGCAGGAGGTGCTCGGAGGCGCGCCGCGTCCCTCGGGCCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS CCA 72 bp GCTCTCCAAGACCCCGCGCGCTCTGCGCTTCACGGGTaGCTCGGGCGGAGGCAGCAGGACCACGGGTCTGGC +
Preference number: 6 (lower is better)
Translates to: ALQDPARSALHG*LGRRQQDHGSG
Trigger: GCCAGACCCGTGGTCCTGCTGCCTCCGCCCGAGCCACCCGTGAAGCGCAGAGCGCGCGGGGTCTTGGAGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS GCA 72 bp GCCTTTAAGCGAAGGGTATCTTCTCGACGTCCGGGCTaGGGCGCAGGAAACGCGCGCGGGGCGGGCCGGGCC +
Preference number: 6 (lower is better)
Translates to: AFKRRVSSRRPG*GAGNARGAGRA
Trigger: GGCCCGGCCCGCCCCGCGCGCGTTTCCTGCGCCGCAGCCCGGACGTCGAGAAGATACCCTTCGCTTAAAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000533625.5
ENST00000553443.5
ENST00000556845.1
CDS GCA 72 bp TCCCTTCCCAAGTGGAAGACCCGCCTGGGAGCCGCGTaGCGCGAGCTCTCCAAGACCCCGCGCGCTCTGCGC +
Preference number: 6 (lower is better)
Translates to: SLPKWKTRLGAA*RELSKTPRALR
Trigger: GCGCAGAGCGCGCGGGGTCTTGGAGAGCTCGCGGCACGCGGCTCCCAGGCGGGTCTTCCACTTGGGAAGGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS GCA 72 bp CCCGCGCCTCGCGGGCCCCGCTCTCGCTCACGAAGTTaGTGCGGATCCTCACTTTCCTCCGCCCGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: PAPRGPRSRSRS*CGSSLSSARCW
Trigger: CCAGCAGCGGGCGGAGGAAAGTGAGGATCCGCAGCAACTTCGTGAGCGAGAGCGGGGCCCGCGAGGCGCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS CCA 72 bp GTAAAAGTCCCGGGGGCGAAACGACCGGGTCTTGCCTaGAGCCGCCGCCTCACCCAGGCCCGAGGGACGCGG +
Preference number: 6 (lower is better)
Translates to: VKVPGAKRPGLA*SRRLTQARGTR
Trigger: CCGCGTCCCTCGGGCCTGGGTGAGGCGGCGGCTCCAGGCAAGACCCGGTCGTTTCGCCCCCGGGACTTTTAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS GCA 72 bp GCGCCTCGCGGGCCCCGCTCTCGCTCACGAAGTTGCTaGGGATCCTCACTTTCCTCCGCCCGCTGCTGGCCT +
Preference number: 6 (lower is better)
Translates to: APRGPRSRSRSC*GSSLSSARCWP
Trigger: AGGCCAGCAGCGGGCGGAGGAAAGTGAGGATCCGCAGCAACTTCGTGAGCGAGAGCGGGGCCCGCGAGGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS CAA 72 bp TCCCGCGCCTCGCGGGCCCCGCTCTCGCTCACGAAGTaGCTGCGGATCCTCACTTTCCTCCGCCCGCTGCTG +
Preference number: 6 (lower is better)
Translates to: SRASRAPLSLTK*LRILTFLRPLL
Trigger: CAGCAGCGGGCGGAGGAAAGTGAGGATCCGCAGCAACTTCGTGAGCGAGAGCGGGGCCCGCGAGGCGCGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS CAA 90 bp CCCGGCATCGAGGGCGCCTCCGCTCCAATTCAGGTGGCGGTGAGCTaGGCCCCGCCGCTCGGCGAGTGTCCAACAGGCCTTTCCTGTGCC +
Preference number: 6 (lower is better)
Translates to: PGIEGASAPIQVAVS*APPLGECPTGLSCA
Trigger: GGCACAGGAAAGGCCTGTTGGACACTCGCCGAGCGGCGGGGCCAAGCTCACCGCCACCTGAATTGGAGCGGAGGCGCCCTCGATGCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS TCA 72 bp GCATCGAGGGCGCCTCCGCTCCAATTCAGGTGGCGGTaGGCTTGGCCCCGCCGCTCGGCGAGTGTCCAACAG +
Preference number: 6 (lower is better)
Translates to: ASRAPPLQFRWR*AWPRRSASVQQ
Trigger: CTGTTGGACACTCGCCGAGCGGCGGGGCCAAGCTCACCGCCACCTGAATTGGAGCGGAGGCGCCCTCGATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS GCA 72 bp GCAAGTAAAAGTCCCGGGGGCGAAACGACCGGGTCTTaGCTGGAGCCGCCGCCTCACCCAGGCCCGAGGGAC +
Preference number: 6 (lower is better)
Translates to: ASKSPGGETTGS*LEPPPHPGPRD
Trigger: GTCCCTCGGGCCTGGGTGAGGCGGCGGCTCCAGGCAAGACCCGGTCGTTTCGCCCCCGGGACTTTTACTTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS CCA 72 bp TCTGTTCGCGCTCCCTTCCCAAGTGGAAGACCCGCCTaGGAGCCGCGTGCCGCGAGCTCTCCAAGACCCCGC +
Preference number: 6 (lower is better)
Translates to: SVRAPFPSGRPA*EPRAASSPRPR
Trigger: GCGGGGTCTTGGAGAGCTCGCGGCACGCGGCTCCCAGGCGGGTCTTCCACTTGGGAAGGGAGCGCGAACAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS CAA 72 bp GAGGGCGCCTCCGCTCCAATTCAGGTGGCGGTGAGCTaGGCCCCGCCGCTCGGCGAGTGTCCAACAGGCCTT +
Preference number: 6 (lower is better)
Translates to: EGASAPIQVAVS*APPLGECPTGL
Trigger: AAGGCCTGTTGGACACTCGCCGAGCGGCGGGGCCAAGCTCACCGCCACCTGAATTGGAGCGGAGGCGCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS CAA 72 bp CCGTCCTCTGCGGAGACGGAGCTGGCCTTCCTCTCTTaGGCCATGCAGGGCCCTGCGAGAGGAGCTACCTCC +
Preference number: 6 (lower is better)
Translates to: PSSAETELAFLS*AMQGPARGATS
Trigger: GGAGGTAGCTCCTCTCGCAGGGCCCTGCATGGCCAAAGAGAGGAAGGCCAGCTCCGTCTCCGCAGAGGACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS GCA 72 bp GGAGCTGGCCTTCCTCTCTTTGGCCATGCAGGGCCCTaGGAGAGGAGCTACCTCCTGGCTCTGTTCGCGCTC +
Preference number: 6 (lower is better)
Translates to: GAGLPLFGHAGP*ERSYLLALFAL
Trigger: GAGCGCGAACAGAGCCAGGAGGTAGCTCCTCTCGCAGGGCCCTGCATGGCCAAAGAGAGGAAGGCCAGCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS GCA 72 bp CTGCGGAGACGGAGCTGGCCTTCCTCTCTTTGGCCATaGAGGGCCCTGCGAGAGGAGCTACCTCCTGGCTCT +
Preference number: 6 (lower is better)
Translates to: LRRRSWPSSLWP*RALREELPPGS
Trigger: AGAGCCAGGAGGTAGCTCCTCTCGCAGGGCCCTGCATGGCCAAAGAGAGGAAGGCCAGCTCCGTCTCCGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS GCA 72 bp CGAAGTTGCTGCGGATCCTCACTTTCCTCCGCCCGCTaGTGGCCTCCATGTAGCCGTCCTCTGCGGAGACGG +
Preference number: 6 (lower is better)
Translates to: RSCCGSSLSSAR*WPPCSRPLRRR
Trigger: CCGTCTCCGCAGAGGACGGCTACATGGAGGCCAGCAGCGGGCGGAGGAAAGTGAGGATCCGCAGCAACTTCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS CCA 72 bp CGTCCTCTGCGGAGACGGAGCTGGCCTTCCTCTCTTTaGCCATGCAGGGCCCTGCGAGAGGAGCTACCTCCT +
Preference number: 6 (lower is better)
Translates to: RPLRRRSWPSSL*PCRALREELPP
Trigger: AGGAGGTAGCTCCTCTCGCAGGGCCCTGCATGGCCAAAGAGAGGAAGGCCAGCTCCGTCTCCGCAGAGGACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS CCA 72 bp AGTTGCTGCGGATCCTCACTTTCCTCCGCCCGCTGCTaGCCTCCATGTAGCCGTCCTCTGCGGAGACGGAGC +
Preference number: 6 (lower is better)
Translates to: SCCGSSLSSARC*PPCSRPLRRRS
Trigger: GCTCCGTCTCCGCAGAGGACGGCTACATGGAGGCCAGCAGCGGGCGGAGGAAAGTGAGGATCCGCAGCAACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS CCA 72 bp TTGGCCATGCAGGGCCCTGCGAGAGGAGCTACCTCCTaGCTCTGTTCGCGCTCCCTTCCCAAGTGGAAGACC +
Preference number: 6 (lower is better)
Translates to: LAMQGPARGATS*LCSRSLPKWKT
Trigger: GGTCTTCCACTTGGGAAGGGAGCGCGAACAGAGCCAGGAGGTAGCTCCTCTCGCAGGGCCCTGCATGGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS TCA 72 bp GCCCACGGAGTCTCCCTGATTGCTAGCACGGCAGTCTaGGATCAAACTGCAAGGCGGCAGCGAGGCTGGGGA +
Preference number: 6 (lower is better)
Translates to: AHGVSLIASTAV*DQTARRQRGWG
Trigger: TCCCCAGCCTCGCTGCCGCCTTGCAGTTTGATCTCAGACTGCCGTGCTAGCAATCAGGGAGACTCCGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476979.5
CDS CCA 72 bp TGGCCAAGGACGCTCCGTATGAGCTCTTTGATGGTCTaGTCGGAGGCCAGCTGGGCCTCGGACTGCAGAGAG +
Preference number: 6 (lower is better)
Translates to: WPRTLRMSSLMV*SEASWASDCRE
Trigger: CTCTCTGCAGTCCGAGGCCCAGCTGGCCTCCGACCAGACCATCAAAGAGCTCATACGGAGCGTCCTTGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS CAA 72 bp TATTTCAGGCCAAAGTGTCTCGGGATTGTGGACATCTaGACAAATTTGACCCGGCATCGAGGGCGCCTCCGC +
Preference number: 6 (lower is better)
Translates to: YFRPKCLGIVDI*TNLTRHRGRLR
Trigger: GCGGAGGCGCCCTCGATGCCGGGTCAAATTTGTCAAGATGTCCACAATCCCGAGACACTTTGGCCTGAAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS CAA 72 bp TGGAGGCTGTGGACTGGGCTTTCATCTACAGCCGGCTaGGAGGCCAACTTCTGCTTGAATCGGAGAAAATCC +
Preference number: 6 (lower is better)
Translates to: WRLWTGLSSTAG*EANFCLNRRKS
Trigger: GGATTTTCTCCGATTCAAGCAGAAGTTGGCCTCCAAGCCGGCTGTAGATGAAAGCCCAGTCCACAGCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000533625.5
ENST00000553443.5
ENST00000556845.1
CDS TCA 72 bp ATAGAGCACACATGGTCATCTCAGCTCTATTCCAGCTaGTTCCGTCCAAGACCTCAATGGCCTTGTCATGGT +
Preference number: 6 (lower is better)
Translates to: IEHTWSSQLYSS*FRPRPQWPCHG
Trigger: ACCATGACAAGGCCATTGAGGTCTTGGACGGAATCAGCTGGAATAGAGCTGAGATGACCATGTGTGCTCTAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
ENST00000554555.1
CDS GCA 72 bp GGGCTTTCATCTACAGCCGGCTTGGAGGCCAACTTCTaGTTGAATCGGAGAAAATCCTTTTTAGTTTCCTGC +
Preference number: 6 (lower is better)
Translates to: GLSSTAGLEANF*LNRRKSFLVSC
Trigger: GCAGGAAACTAAAAAGGATTTTCTCCGATTCAAGCAGAAGTTGGCCTCCAAGCCGGCTGTAGATGAAAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000533625.5
ENST00000553443.5
ENST00000556845.1
CDS CAA 90 bp TGGACTGGGCTTTCATCTACAGCCGGCTTGGAGGCCAACTTCTGCTaGAATCGGAGAAAATCCTTTTTAGTTTCCTGCCGAACTTTCTCA +
Preference number: 6 (lower is better)
Translates to: WTGLSSTAGLEANFC*NRRKSFLVSCRTFS
Trigger: TGAGAAAGTTCGGCAGGAAACTAAAAAGGATTTTCTCCGATTCAAGCAGAAGTTGGCCTCCAAGCCGGCTGTAGATGAAAGCCCAGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000533625.5
ENST00000553443.5
ENST00000556845.1
CDS CAA 90 bp CCCATTTATAACATGCAGGGCTTGGTTTTCTGTTTCTGCATTAGTTaGCTGAGGATAATGGCTTCCAGCTCCATCCACGTCCCTTGGTTC +
Preference number: 6 (lower is better)
Translates to: PIYNMQGLVFCFCIS*LRIMASSSIHVPWF
Trigger: GAACCAAGGGACGTGGATGGAGCTGGAAGCCATTATCCTCAGCAAACTAATGCAGAAACAGAAAACCAAGCCCTGCATGTTATAAATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554555.1
CDS CAA 72 bp CTTTCATCTACAGCCGGCTTGGAGGCCAACTTCTGCTaGAATCGGAGAAAATCCTTTTTAGTTTCCTGCCGA +
Preference number: 6 (lower is better)
Translates to: LSSTAGLEANFC*NRRKSFLVSCR
Trigger: TCGGCAGGAAACTAAAAAGGATTTTCTCCGATTCAAGCAGAAGTTGGCCTCCAAGCCGGCTGTAGATGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000533625.5
ENST00000553443.5
ENST00000556845.1
CDS TCA 72 bp CTCCATCCACGTCCCTTGGTTCTCTTGGCCTTCATTTaGACTTTTGCTAATAGAGCACACATGGTCATCTCA +
Preference number: 6 (lower is better)
Translates to: LHPRPLVLLAFI*TFANRAHMVIS
Trigger: TGAGATGACCATGTGTGCTCTATTAGCAAAAGTTCAAATGAAGGCCAAGAGAACCAAGGGACGTGGATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554555.1
CDS CAA 72 bp GAAGAGTTTGAAGAGGATTCACTCCTGAAGAGAAGGTaGCACCCCCAGTTCTCAGAAATGAGTCAAGGGAAA +
Preference number: 6 (lower is better)
Translates to: EEFEEDSLLKRR*HPQFSEMSQGK
Trigger: TTTCCCTTGACTCATTTCTGAGAACTGGGGGTGCAACCTTCTCTTCAGGAGTGAATCCTCTTCAAACTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000478811.6
ENST00000555921.1
CDS CAA 72 bp CACGTCCCTTGGTTCTCTTGGCCTTCATTTGAACTTTaGCTAATAGAGCACACATGGTCATCTCAGCTCTAT +
Preference number: 6 (lower is better)
Translates to: HVPWFSWPSFEL*LIEHTWSSQLY
Trigger: ATAGAGCTGAGATGACCATGTGTGCTCTATTAGCAAAAGTTCAAATGAAGGCCAAGAGAACCAAGGGACGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554555.1
CDS CAA 72 bp GTGATTTTGCCGTTAAAGACACCCACTTGGCTTCTTTaGAATCACTTGTGGGCTGTCCATCTTCCAAAGGTT +
Preference number: 6 (lower is better)
Translates to: VILPLKTPTWLL*NHLWAVHLPKV
Trigger: AACCTTTGGAAGATGGACAGCCCACAAGTGATTCAAAAGAAGCCAAGTGGGTGTCTTTAACGGCAAAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS CAA 90 bp CCTCCATGTAACAAAGACCCAAGTTATACAGACAGTCTGCTGAAATaGCTGTGGCATCTGGTCCTTTATCAGAATGAGAAATGGCATCCA +
Preference number: 6 (lower is better)
Translates to: PPCNKDPSYTDSLLK*LWHLVLYQNEKWHP
Trigger: TGGATGCCATTTCTCATTCTGATAAAGGACCAGATGCCACAGCAATTTCAGCAGACTGTCTGTATAACTTGGGTCTTTGTTACATGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS CAA 90 bp GTGATTTTGCCGTTAAAGACACCCACTTGGCTTCTTTTGAATCACTaGTGGGCTGTCCATCTTCCAAAGGTTTACTTAATTCCTCTGCTG +
Preference number: 6 (lower is better)
Translates to: VILPLKTPTWLLLNH*WAVHLPKVYLIPLL
Trigger: CAGCAGAGGAATTAAGTAAACCTTTGGAAGATGGACAGCCCACAAGTGATTCAAAAGAAGCCAAGTGGGTGTCTTTAACGGCAAAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS TCA 72 bp ACTTCCACAGCTTCCTTGGTTCTCTTGGCCTTCATTTaGACTTTTGCTAATAGAGCACACATGGTCATCTCA +
Preference number: 6 (lower is better)
Translates to: TSTASLVLLAFI*TFANRAHMVIS
Trigger: TGAGATGACCATGTGTGCTCTATTAGCAAAAGTTCAAATGAAGGCCAAGAGAACCAAGGAAGCTGTGGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS TCA 72 bp TCTCTTTTACAGGTATGCTCGCATCTTTGTACTCAATaGGCCTATCAAGAGCCCATGTCCGAGGATCAATAT +
Preference number: 6 (lower is better)
Translates to: SLLQVCSHLCTQ*AYQEPMSEDQY
Trigger: ATATTGATCCTCGGACATGGGCTCTTGATAGGCTCATTGAGTACAAAGATGCGAGCATACCTGTAAAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS CCA 72 bp TTATGCACGCTCATTTGCGATTCCTCAGCACCCATCTaGAATTTATACTCTGCTTGTATCTCAGGTGTTTCT +
Preference number: 6 (lower is better)
Translates to: LCTLICDSSAPI*NLYSACISGVS
Trigger: AGAAACACCTGAGATACAAGCAGAGTATAAATTCCAGATGGGTGCTGAGGAATCGCAAATGAGCGTGCATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS CCA 72 bp AGAATTCTGGTGATTTTGCCGTTAAAGACACCCACTTaGCTTCTTTTGAATCACTTGTGGGCTGTCCATCTT +
Preference number: 6 (lower is better)
Translates to: RILVILPLKTPT*LLLNHLWAVHL
Trigger: AAGATGGACAGCCCACAAGTGATTCAAAAGAAGCCAAGTGGGTGTCTTTAACGGCAAAATCACCAGAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS CAA 72 bp CAGCTTCCTTGGTTCTCTTGGCCTTCATTTGAACTTTaGCTAATAGAGCACACATGGTCATCTCAGCTCTAT +
Preference number: 6 (lower is better)
Translates to: QLPWFSWPSFEL*LIEHTWSSQLY
Trigger: ATAGAGCTGAGATGACCATGTGTGCTCTATTAGCAAAAGTTCAAATGAAGGCCAAGAGAACCAAGGAAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS CAA 72 bp ATAAAGTGTGCGTTAAAGACACCCACTTGGCTTCTTTaGAATCACTTGTGGGCTGTCCATCTTCCAAAGGTT +
Preference number: 6 (lower is better)
Translates to: IKCALKTPTWLL*NHLWAVHLPKV
Trigger: AACCTTTGGAAGATGGACAGCCCACAAGTGATTCAAAAGAAGCCAAGTGGGTGTCTTTAACGCACACTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS CAA 90 bp TCCTGCCGAACTTTCTCAAGCTCTTTAAACATATACGATTCCTCTTaGTATTTCAGGCCAAAGTGTCTCGGGATTGTGGACATCTTGACA +
Preference number: 6 (lower is better)
Translates to: SCRTFSSSLNIYDSS*YFRPKCLGIVDILT
Trigger: TGTCAAGATGTCCACAATCCCGAGACACTTTGGCCTGAAATACAAAGAGGAATCGTATATGTTTAAAGAGCTTGAGAAAGTTCGGCAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000556845.1
CDS CAA 90 bp CTGAGGGTCCCCATTCTATATCCTCTTGTTCAATCTGGAGAATACTaGACATGGTTTCAGAAAGTTCCTTATGCACGCTCATTTGCGATT +
Preference number: 6 (lower is better)
Translates to: LRVPILYPLVQSGEY*TWFQKVPYARSFAI
Trigger: AATCGCAAATGAGCGTGCATAAGGAACTTTCTGAAACCATGTCAAGTATTCTCCAGATTGAACAAGAGGATATAGAATGGGGACCCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS CAA 90 bp ATAAAGTGTGCGTTAAAGACACCCACTTGGCTTCTTTTGAATCACTaGTGGGCTGTCCATCTTCCAAAGGTTTACTTAATTCCTCTGCTG +
Preference number: 6 (lower is better)
Translates to: IKCALKTPTWLLLNH*WAVHLPKVYLIPLL
Trigger: CAGCAGAGGAATTAAGTAAACCTTTGGAAGATGGACAGCCCACAAGTGATTCAAAAGAAGCCAAGTGGGTGTCTTTAACGCACACTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS TCA 72 bp CATGTAACAAAGACCCAAGTTATACAGACAGTCTGCTaGAATTGCTGTGGCATCTGGTCCTTTATCAGAATG +
Preference number: 6 (lower is better)
Translates to: HVTKTQVIQTVC*NCCGIWSFIRM
Trigger: CATTCTGATAAAGGACCAGATGCCACAGCAATTTCAGCAGACTGTCTGTATAACTTGGGTCTTTGTTACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS TCA 72 bp TGTCCTCTTCTTATGTATAATTGGATTCCATCTGGCTaGAGGTGGATAGCACGAGACAATTCATTTACTGCC +
Preference number: 6 (lower is better)
Translates to: CPLLMYNWIPSG*RWIARDNSFTA
Trigger: GGCAGTAAATGAATTGTCTCGTGCTATCCACCTTCAGCCAGATGGAATCCAATTATACATAAGAAGAGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476979.5
ENST00000553443.5
CDS TCA 72 bp GCAGCAATTCTGAGGTTCTCATCTCATGCCAAAAATTaGCTAGTGTTCCTTGCACTGGGAGTAGATTCATAT +
Preference number: 6 (lower is better)
Translates to: AAILRFSSHAKN*LVFLALGVDSY
Trigger: ATATGAATCTACTCCCAGTGCAAGGAACACTAGTCAATTTTTGGCATGAGATGAGAACCTCAGAATTGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553887.1
CDS CCA 72 bp CCTATCAAGAGCCCATGTCCGAGGATCAATATTTTCTaGAATTCCTCCCTTAGCTTGGACGAATTTTTCAAA +
Preference number: 6 (lower is better)
Translates to: PIKSPCPRINIF*NSSLSLDEFFK
Trigger: TTTGAAAAATTCGTCCAAGCTAAGGGAGGAATTCCAGAAAATATTGATCCTCGGACATGGGCTCTTGATAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS CAA 72 bp GCGTTAAAGACACCCACTTGGCTTCTTTTGAATCACTaGTGGGCTGTCCATCTTCCAAAGGTTTACTTAATT +
Preference number: 6 (lower is better)
Translates to: ALKTPTWLLLNH*WAVHLPKVYLI
Trigger: AATTAAGTAAACCTTTGGAAGATGGACAGCCCACAAGTGATTCAAAAGAAGCCAAGTGGGTGTCTTTAACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533625.5
CDS CAA 72 bp CCGTTAAAGACACCCACTTGGCTTCTTTTGAATCACTaGTGGGCTGTCCATCTTCCAAAGGTTTACTTAATT +
Preference number: 6 (lower is better)
Translates to: PLKTPTWLLLNH*WAVHLPKVYLI
Trigger: AATTAAGTAAACCTTTGGAAGATGGACAGCCCACAAGTGATTCAAAAGAAGCCAAGTGGGTGTCTTTAACGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS CAA 90 bp AGAATTCTGGTGATTTTGCCGTTAAAGACACCCACTTGGCTTCTTTaGAATCACTTGTGGGCTGTCCATCTTCCAAAGGTTTACTTAATT +
Preference number: 6 (lower is better)
Translates to: RILVILPLKTPTWLL*NHLWAVHLPKVYLI
Trigger: AATTAAGTAAACCTTTGGAAGATGGACAGCCCACAAGTGATTCAAAAGAAGCCAAGTGGGTGTCTTTAACGGCAAAATCACCAGAATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553443.5
CDS CAA 72 bp AACAAAGACCCAAGTTATACAGACAGTCTGCTGAAATaGCTGTGGCATCTGGTCCTTTATCAGAATGAGAAA +
Preference number: 6 (lower is better)
Translates to: NKDPSYTDSLLK*LWHLVLYQNEK
Trigger: TTTCTCATTCTGATAAAGGACCAGATGCCACAGCAATTTCAGCAGACTGTCTGTATAACTTGGGTCTTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS TCA 72 bp TCTTTCATTGCATTCTGTTTGTGGCCCATAAACTCATaGATCACCCCACGATTTGTTAAGAATTCTGCTGTA +
Preference number: 6 (lower is better)
Translates to: SFIAFCLWPINS*ITPRFVKNSAV
Trigger: TACAGCAGAATTCTTAACAAATCGTGGGGTGATTCATGAGTTTATGGGCCACAAACAGAATGCAATGAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267368.11
ENST00000382320.4
ENST00000476979.5
ENST00000478811.6
ENST00000553443.5
CDS TCA 72 bp CCATTCTATATCCTCTTGTTCAATCTGGAGAATACTTaGCATGGTTTCAGAAAGTTCCTTATGCACGCTCAT +
Preference number: 6 (lower is better)
Translates to: PFYILLFNLENT*HGFRKFLMHAH
Trigger: ATGAGCGTGCATAAGGAACTTTCTGAAACCATGTCAAGTATTCTCCAGATTGAACAAGAGGATATAGAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533625.5
ENST00000553443.5
CDS GCA 72 bp TTCTGCTTGAATCGGAGAAAATCCTTTTTAGTTTCCTaGCGAACTTTCTCAAGCTCTTTAAACATATACGAT +
Preference number: 6 (lower is better)
Translates to: FCLNRRKSFLVS*RTFSSSLNIYD
Trigger: ATCGTATATGTTTAAAGAGCTTGAGAAAGTTCGGCAGGAAACTAAAAAGGATTTTCTCCGATTCAAGCAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000533625.5
ENST00000553443.5
ENST00000556845.1