RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTC5 (Homo sapiens)

Ensembl gene IDs: ENSG00000136319

Ensembl transcript IDs: ENST00000258821.8, ENST00000383029.7, ENST00000553828.1, ENST00000554157.5, ENST00000554992.1, ENST00000556592.1, ENST00000557379.1

Found 266 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTCATTCACACTGTGGTCGCGATGCCACTGTGGCAACAGCCTGGCTaGTGGATCCCTGAGGCTTCCCATTCACCACTAGCAGGAGGGGCG +
Preference number: 1 (lower is better)
Translates to: VIHTVVAMPLWQQPG*WIPEASHSPLAGGA
Trigger: CGCCCCTCCTGCTAGTGGTGAATGGGAAGCCTCAGGGATCCAGCAGCCAGGCTGTTGCCACAGTGGCATCGCGACCACAGTGTGAATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR CCA 90 bp CCTCCACTCCCTGTTGAGCATGCAAGTCAAAGGTCATTCACACTGTaGTCGCGATGCCACTGTGGCAACAGCCTGGCTGCTGGATCCCTG +
Preference number: 1 (lower is better)
Translates to: PPLPVEHASQRSFTL*SRCHCGNSLAAGSL
Trigger: CAGGGATCCAGCAGCCAGGCTGTTGCCACAGTGGCATCGCGACCACAGTGTGAATGACCTTTGACTTGCATGCTCAACAGGGAGTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR CCA 90 bp GCATGCAAGTCAAAGGTCATTCACACTGTGGTCGCGATGCCACTGTaGCAACAGCCTGGCTGCTGGATCCCTGAGGCTTCCCATTCACCA +
Preference number: 1 (lower is better)
Translates to: ACKSKVIHTVVAMPL*QQPGCWIPEASHSP
Trigger: TGGTGAATGGGAAGCCTCAGGGATCCAGCAGCCAGGCTGTTGCCACAGTGGCATCGCGACCACAGTGTGAATGACCTTTGACTTGCATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR TCA 90 bp GGTGAAGCCGCAGGTTGGGCTCAGGAATGGCTACAGAGTCTCCAATaGGCACTCCCCAGCTCTGCACTATATTGTACACCATCACTGCAT +
Preference number: 1 (lower is better)
Translates to: GEAAGWAQEWLQSLQ*ALPSSALYCTPSLH
Trigger: ATGCAGTGATGGTGTACAATATAGTGCAGAGCTGGGGAGTGCTCATTGGAGACTCTGTAGCCATTCCTGAGCCCAACCTGCGGCTTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR CCA 90 bp AGAAAGTCTTCATTTAAAACATTCCTCCCATCCCTGCTGAATCACTaGATGTGGCTGGACCGGCTGTCCAGAGCCTTGTCTCCTCTCCTC +
Preference number: 1 (lower is better)
Translates to: RKSSFKTFLPSLLNH*MWLDRLSRALSPLL
Trigger: GAGGAGAGGAGACAAGGCTCTGGACAGCCGGTCCAGCCACATCCAGTGATTCAGCAGGGATGGGAGGAATGTTTTAAATGAAGACTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
3UTR TCA 90 bp GCTCTGCACTATATTGTACACCATCACTGCATAGCAAGGTCCATCTaGATCTACCAGGCCAAATGTAAAGGGGACTTTCTCCTCTGTGGT +
Preference number: 1 (lower is better)
Translates to: ALHYIVHHHCIARSI*IYQAKCKGDFLLCG
Trigger: ACCACAGAGGAGAAAGTCCCCTTTACATTTGGCCTGGTAGATTCAGATGGACCTTGCTATGCAGTGATGGTGTACAATATAGTGCAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR CCA 90 bp TACTTACTTGTTTGTACGCACTGCTTCTCTGTGGCTACCACCTACTaGCCATTTTTCTACTCTCTAGCCCTACACAGAACATGTCAACTC +
Preference number: 1 (lower is better)
Translates to: YLLVCTHCFSVATTY*PFFYSLALHRTCQL
Trigger: GAGTTGACATGTTCTGTGTAGGGCTAGAGAGTAGAAAAATGGCCAGTAGGTGGTAGCCACAGAGAAGCAGTGCGTACAAACAAGTAAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR TCA 90 bp CTACTCTCTAGCCCTACACAGAACATGTCAACTCATCTCAGAATTTaGGTAAAAGGGGAACAGTATTTGGGTCCCACATCTCTACTGCCT +
Preference number: 1 (lower is better)
Translates to: LLSSPTQNMSTHLRI*VKGEQYLGPTSLLP
Trigger: AGGCAGTAGAGATGTGGGACCCAAATACTGTTCCCCTTTTACTCAAATTCTGAGATGAGTTGACATGTTCTGTGTAGGGCTAGAGAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR GCA 90 bp GGGATGCTGATGCTGCTGGTCTGGGAACCACTCTTCAAGAGCCATTaGTGTAAAAGAAACTTTTGCACTTACATATCAGGACATATACAA +
Preference number: 1 (lower is better)
Translates to: GMLMLLVWEPLFKSH*CKRNFCTYISGHIQ
Trigger: TTGTATATGTCCTGATATGTAAGTGCAAAAGTTTCTTTTACAGCAATGGCTCTTGAAGAGTGGTTCCCAGACCAGCAGCATCAGCATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR CCA 90 bp ATTTGCATTTCAAAGAAGTTCCAAGGGATGCTGATGCTGCTGGTCTaGGAACCACTCTTCAAGAGCCATTGCTGTAAAAGAAACTTTTGC +
Preference number: 1 (lower is better)
Translates to: ICISKKFQGMLMLLV*EPLFKSHCCKRNFC
Trigger: GCAAAAGTTTCTTTTACAGCAATGGCTCTTGAAGAGTGGTTCCCAGACCAGCAGCATCAGCATCCCTTGGAACTTCTTTGAAATGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR TCA 90 bp GGCACTGATCAAAAACTGAACAGGACTGGACCAAGAACAAAGATCTaGGCCATTTCACTAGAAGACTTCTCAATTCATCTGTATACATTA +
Preference number: 1 (lower is better)
Translates to: GTDQKLNRTGPRTKI*AISLEDFSIHLYTL
Trigger: TAATGTATACAGATGAATTGAGAAGTCTTCTAGTGAAATGGCTCAGATCTTTGTTCTTGGTCCAGTCCTGTTCAGTTTTTGATCAGTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR CCA 90 bp ATGTCACTAGACTCTAAAGAAACTGAGGATTTATCTAACTCTCTCTaGTCCTTCAGCCTAGTAACACTATTAGAACAGTATTGCTCTGTC +
Preference number: 1 (lower is better)
Translates to: MSLDSKETEDLSNSL*SFSLVTLLEQYCSV
Trigger: GACAGAGCAATACTGTTCTAATAGTGTTACTAGGCTGAAGGACCAGAGAGAGTTAGATAAATCCTCAGTTTCTTTAGAGTCTAGTGACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR TCA 90 bp ATAGATAAAACTTCTCTCATCAATGCATTTCTACCATCCATTCTCTaGGGAGGCCTCTGCACTCTTTATAAATTTAATGAGTCATCAATG +
Preference number: 1 (lower is better)
Translates to: IDKTSLINAFLPSIL*GGLCTLYKFNESSM
Trigger: CATTGATGACTCATTAAATTTATAAAGAGTGCAGAGGCCTCCTCAGAGAATGGATGGTAGAAATGCATTGATGAGAGAAGTTTTATCTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR-3UTR GCA 90 bp CTGAATCACTGGATGTGGCTGGACCGGCTGTCCAGAGCCTTGTCTCCTCTCCTCGGCAGGGTCCAGGGCTaGAGCCCGAGAGAAGCCCTC +
Preference number: 2 (lower is better)
Translates to: LNHWMWLDRLSRALSPLLGRVQG*SPREAL
Trigger: GAGGGCTTCTCTCGGGCTGCAGCCCTGGACCCTGCC...GAGGAGAGGAGACAAGGCTCTGGACAGCCGGTCCAGCCACATCCAGTGATTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR-3UTR GCA 90 bp CTGAATCACTGGATGTGGCTGGACCGGCTGTCCAGAGCCTTGTCTCCTCTCCTCGCAACTTTGTGGAGTTaGCATTCCTGCCTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: LNHWMWLDRLSRALSPLLATLWS*HSCLGL
Trigger: CAGCCCCAGGCAGGAATGGCAACTCCACAAAGTTGC...GAGGAGAGGAGACAAGGCTCTGGACAGCCGGTCCAGCCACATCCAGTGATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR-3UTR CCA 90 bp CTGAATCACTGGATGTGGCTGGACCGGCTGTCCAGAGCCTTGTCTCCTCTCCTCAGGTCATTCACACTGTaGTCGCGATGCCACTGTGGC +
Preference number: 2 (lower is better)
Translates to: LNHWMWLDRLSRALSPLLRSFTL*SRCHCG
Trigger: GCCACAGTGGCATCGCGACCACAGTGTGAATGACCT...GAGGAGAGGAGACAAGGCTCTGGACAGCCGGTCCAGCCACATCCAGTGATTCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR CAA 90 bp TCCCTGCTGAATCACTGGATGTGGCTGGACCGGCTGTCCAGAGCCTaGTCTCCTCTCCTCCACTCCCTGTTGAGCATGCAAGTCAAAGGT +
Preference number: 2 (lower is better)
Translates to: SLLNHWMWLDRLSRA*SPLLHSLLSMQVKG
Trigger: ACCTTTGACTTGCATGCTCAACAGGGAGTGGAGGAGAGGAGACAAGGCTCTGGACAGCCGGTCCAGCCACATCCAGTGATTCAGCAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR-3UTR TCA 90 bp CTGAATCACTGGATGTGGCTGGACCGGCTGTCCAGAGCCTTGTCTCCTCTCCTCTTTCTGCCCAGAGGCTaGCTGATAGTGCCCATCACT +
Preference number: 2 (lower is better)
Translates to: LNHWMWLDRLSRALSPLLFLPRG*LIVPIT
Trigger: AGTGATGGGCACTATCAGTCAGCCTCTGGGCAGAAA...GAGGAGAGGAGACAAGGCTCTGGACAGCCGGTCCAGCCACATCCAGTGATTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR-3UTR TCA 90 bp CAGGAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCCACCTTTCCCAGGATaGCGGCACCGCTGTTCACCC +
Preference number: 2 (lower is better)
Translates to: QEPWGLCPMARSQDFYQFPPFPG*RHRCSP
Trigger: GGGTGAACAGCGGTGCCGTCATCCTGGGAAAGGTGG...GAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR-3UTR CCA 90 bp CTGAATCACTGGATGTGGCTGGACCGGCTGTCCAGAGCCTTGTCTCCTCTCCTCGGGGACTCTGTCCCATaGCAAGATCCCAAGACTTCT +
Preference number: 2 (lower is better)
Translates to: LNHWMWLDRLSRALSPLLGDSVP*QDPKTS
Trigger: AGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCC...GAGGAGAGGAGACAAGGCTCTGGACAGCCGGTCCAGCCACATCCAGTGATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
3UTR-3UTR GCA 90 bp GTCATTCACACTGTGGTCGCGATGCCACTGTGGCAACAGCCTGGCTGCTGGATCAATTCCAGAAGTTGTTaGTCTCGTTGCCGGGGCTCT +
Preference number: 2 (lower is better)
Translates to: VIHTVVAMPLWQQPGCWINSRSC*SRCRGS
Trigger: AGAGCCCCGGCAACGAGAGCAACAACTTCTGGAATT...GATCCAGCAGCCAGGCTGTTGCCACAGTGGCATCGCGACCACAGTGTGAATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR-3UTR GCA 90 bp GTCATTCACACTGTGGTCGCGATGCCACTGTGGCAACAGCCTGGCTGCTGGATCGCAAGCTTCCCAGCATaGTCTGCAGCTTTTTGGTCT +
Preference number: 2 (lower is better)
Translates to: VIHTVVAMPLWQQPGCWIASFPA*SAAFWS
Trigger: AGACCAAAAAGCTGCAGAGCATGCTGGGAAGCTTGC...GATCCAGCAGCCAGGCTGTTGCCACAGTGGCATCGCGACCACAGTGTGAATGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR-3UTR CCA 90 bp CTGAATCACTGGATGTGGCTGGACCGGCTGTCCAGAGCCTTGTCTCCTCTCCTCTGCCAGAAGAGTATGTaGCCCTGTAGAGAGCTGGAA +
Preference number: 2 (lower is better)
Translates to: LNHWMWLDRLSRALSPLLCQKSM*PCRELE
Trigger: TTCCAGCTCTCTACAGGGCCACATACTCTTCTGGCA...GAGGAGAGGAGACAAGGCTCTGGACAGCCGGTCCAGCCACATCCAGTGATTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
3UTR-3UTR TCA 90 bp CAGGAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCTCCTCCCATCCCTGCTaGATCACTGGATGTGGCTGG +
Preference number: 2 (lower is better)
Translates to: QEPWGLCPMARSQDFYQFSSHPC*ITGCGW
Trigger: CCAGCCACATCCAGTGATTCAGCAGGGATGGGAGGA...GAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
3UTR-3UTR TCA 90 bp CCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATGCTTCCTCCCATCCCTGCTaGATCACTGGATGTGGCTGG +
Preference number: 2 (lower is better)
Translates to: PWGLCPMARSQDFYQFHASSHPC*ITGCGW
Trigger: CCAGCCACATCCAGTGATTCAGCAGGGATGGGAGGA...AGCATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
3UTR-3UTR TCA 90 bp ACAGGAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTGAACTCCTGACCTCGTaGTCCACCCGCCTTGGACTC +
Preference number: 2 (lower is better)
Translates to: TGTLGTLSHGKIPRLLPIELLTS*STRLGL
Trigger: GAGTCCAAGGCGGGTGGATCACGAGGTCAGGAGTTC...AATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR-3UTR CCA 90 bp CCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATGCTATCACTGGATGTGGCTaGACCGGCTGTCCAGAGCCT +
Preference number: 2 (lower is better)
Translates to: PWGLCPMARSQDFYQFHAITGCG*TGCPEP
Trigger: AGGCTCTGGACAGCCGGTCCAGCCACATCCAGTGAT...AGCATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
3UTR-3UTR CCA 90 bp CAGGAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCGGTGAAGCCGCAGGTTaGGCTCAGGAATGGCTACAG +
Preference number: 2 (lower is better)
Translates to: QEPWGLCPMARSQDFYQFGEAAG*AQEWLQ
Trigger: CTGTAGCCATTCCTGAGCCCAACCTGCGGCTTCACC...GAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR-3UTR TCA 90 bp GGCTACAGAGTCTCCAATGAGCACTCCCCAGCTCTGCACTATATTGTACACCATCTGTTCACCCCAGGCTaGAGCGTACTCAGTGGCTTG +
Preference number: 2 (lower is better)
Translates to: GYRVSNEHSPALHYIVHHLFTPG*SVLSGL
Trigger: CAAGCCACTGAGTACGCTTCAGCCTGGGGTGAACAG...ATGGTGTACAATATAGTGCAGAGCTGGGGAGTGCTCATTGGAGACTCTGTAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR-3UTR CCA 90 bp AGCATGCAAGTCAAAGGTCATTCACACTGTGGTCGCGATGCCACTGTGGCAACACTGAAGCGTACTCAGTaGCTTGAGCTCCAGGGTCAC +
Preference number: 2 (lower is better)
Translates to: SMQVKGHSHCGRDATVATLKRTQ*LELQGH
Trigger: GTGACCCTGGAGCTCAAGCCACTGAGTACGCTTCAG...TGTTGCCACAGTGGCATCGCGACCACAGTGTGAATGACCTTTGACTTGCATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR-3UTR TCA 90 bp ACAGGAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTGCGTACTCAGTGGCTTaGGCTCCAGGGTCACTTTCT +
Preference number: 2 (lower is better)
Translates to: TGTLGTLSHGKIPRLLPIAYSVA*APGSLS
Trigger: AGAAAGTGACCCTGGAGCTCAAGCCACTGAGTACGC...AATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR-3UTR CCA 90 bp CAGGCCAAATGTAAAGGGGACTTTCTCCTCTGTGGTGAGGCTAAATACCACCTTATCACTGGATGTGGCTaGACCGGCTGTCCAGAGCCT +
Preference number: 2 (lower is better)
Translates to: QAKCKGDFLLCGEAKYHLITGCG*TGCPEP
Trigger: AGGCTCTGGACAGCCGGTCCAGCCACATCCAGTGAT...AAGGTGGTATTTAGCCTCACCACAGAGGAGAAAGTCCCCTTTACATTTGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR-3UTR CCA 90 bp ACCAGGCCAAATGTAAAGGGGACTTTCTCCTCTGTGGTGAGGCTAAATACCACCCTGAATCACTGGATGTaGCTGGACCGGCTGTCCAGA +
Preference number: 2 (lower is better)
Translates to: TRPNVKGTFSSVVRLNTTLNHWM*LDRLSR
Trigger: TCTGGACAGCCGGTCCAGCCACATCCAGTGATTCAG...GGTGGTATTTAGCCTCACCACAGAGGAGAAAGTCCCCTTTACATTTGGCCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR-3UTR CCA 90 bp CCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATGCTCTTGGACTCCCAAAGTaGTGGGATTACAGGCTGAGC +
Preference number: 2 (lower is better)
Translates to: PWGLCPMARSQDFYQFHALGLPK*WDYRLS
Trigger: GCTCAGCCTGTAATCCCACCACTTTGGGAGTCCAAG...AGCATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR-3UTR CCA 90 bp AGGGGGCTTGAGAATTTGCATTTCAAAGAAGTTCCAAGGGATGCTGATGCTGCTTCCCTGCTGAATCACTaGATGTGGCTGGACCGGCTG +
Preference number: 2 (lower is better)
Translates to: RGLENLHFKEVPRDADAASLLNH*MWLDRL
Trigger: CAGCCGGTCCAGCCACATCCAGTGATTCAGCAGGGA...AGCAGCATCAGCATCCCTTGGAACTTCTTTGAAATGCAAATTCTCAAGCCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR-3UTR GCA 90 bp ACAGGAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTGAGACAGGAGAGATATaGCAGAAGAGTATGTGGCCC +
Preference number: 2 (lower is better)
Translates to: TGTLGTLSHGKIPRLLPIETGEI*QKSMWP
Trigger: GGGCCACATACTCTTCTGGCATATCTCTCCTGTCTC...AATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
3UTR-3UTR GCA 90 bp TGTGCTGAATTCGGTGAAGCCGCAGGTTGGGCTCAGGAATGGCTACAGAGTCTCCTCTCTTCATATTTATaGAACGTCGCCCTGTTCAGA +
Preference number: 2 (lower is better)
Translates to: CAEFGEAAGWAQEWLQSLLSSYL*NVALFR
Trigger: TCTGAACAGGGCGACGTTGCATAAATATGAAGAGAG...GAGACTCTGTAGCCATTCCTGAGCCCAACCTGCGGCTTCACCGAATTCAGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR-3UTR GCA 90 bp AGCATGCAAGTCAAAGGTCATTCACACTGTGGTCGCGATGCCACTGTGGCAACAAGCACTCCCCAGCTCTaGACTATATTGTACACCATC +
Preference number: 2 (lower is better)
Translates to: SMQVKGHSHCGRDATVATSTPQL*TILYTI
Trigger: GATGGTGTACAATATAGTGCAGAGCTGGGGAGTGCT...TGTTGCCACAGTGGCATCGCGACCACAGTGTGAATGACCTTTGACTTGCATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR-3UTR CCA 90 bp CAGGAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCTCTCTAGCAACTTTGTaGAGTTGCCATTCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: QEPWGLCPMARSQDFYQFSLATL*SCHSCL
Trigger: CAGGCAGGAATGGCAACTCCACAAAGTTGCTAGAGA...GAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR-3UTR TCA 90 bp ACAGGAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTGTCGGACACTGTCCATaGCATGGTGAGAATGTTCAT +
Preference number: 2 (lower is better)
Translates to: TGTLGTLSHGKIPRLLPIVGHCP*HGENVH
Trigger: ATGAACATTCTCACCATGTCATGGACAGTGTCCGAC...AATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR-3UTR TCA 90 bp ACAGGAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTTCATGGACATCCATCTaGACAGCCAACTTAGCCTGT +
Preference number: 2 (lower is better)
Translates to: TGTLGTLSHGKIPRLLPISWTSI*TANLAC
Trigger: ACAGGCTAAGTTGGCTGTTCAGATGGATGTCCATGA...AATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR-3UTR TCA 90 bp TACCAGGCCAAATGTAAAGGGGACTTTCTCCTCTGTGGTGAGGCTAAATACCACGTCGCCCTGTTCAGATaGAGGTCAGGATTGCTAGAA +
Preference number: 2 (lower is better)
Translates to: YQAKCKGDFLLCGEAKYHVALFR*RSGLLE
Trigger: TTCTAGCAATCCTGACCTTCATCTGAACAGGGCGAC...GTGGTATTTAGCCTCACCACAGAGGAGAAAGTCCCCTTTACATTTGGCCTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR-3UTR CCA 90 bp CAGGCCAAATGTAAAGGGGACTTTCTCCTCTGTGGTGAGGCTAAATACCACCTTTGCCAGAAGAGTATGTaGCCCTGTAGAGAGCTGGAA +
Preference number: 2 (lower is better)
Translates to: QAKCKGDFLLCGEAKYHLCQKSM*PCRELE
Trigger: TTCCAGCTCTCTACAGGGCCACATACTCTTCTGGCA...AAGGTGGTATTTAGCCTCACCACAGAGGAGAAAGTCCCCTTTACATTTGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR-3UTR GCA 90 bp TGTGCTGAATTCGGTGAAGCCGCAGGTTGGGCTCAGGAATGGCTACAGAGTCTCCAATTCCATGCTCTTTaGTTAAAACATAGAGAGCAG +
Preference number: 2 (lower is better)
Translates to: CAEFGEAAGWAQEWLQSLQFHAL*LKHREQ
Trigger: CTGCTCTCTATGTTTTAAGCAAAGAGCATGGAATTG...GAGACTCTGTAGCCATTCCTGAGCCCAACCTGCGGCTTCACCGAATTCAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR CAA 90 bp TTTTACTGTGCATCAGAGTCACCTGGAGGGTTTGCGAAACACAGATaGCTGGGCTCCTCCCACATAGTTTTGAATTCAGTAAGTCTGGGT +
Preference number: 2 (lower is better)
Translates to: FYCASESPGGFAKHR*LGSSHIVLNSVSLG
Trigger: ACCCAGACTTACTGAATTCAAAACTATGTGGGAGGAGCCCAGCAATCTGTGTTTCGCAAACCCTCCAGGTGACTCTGATGCACAGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR-3UTR TCA 90 bp CCACTCTTCAAGAGCCATTGCTGTAAAAGAAACTTTTGCACTTACATATCAGGACTGATCTTGAACTCCTaGCCTCGTGATCCACCCGCC +
Preference number: 2 (lower is better)
Translates to: PLFKSHCCKRNFCTYISGLILNS*PRDPPA
Trigger: GGCGGGTGGATCACGAGGTCAGGAGTTCAAGATCAG...TCCTGATATGTAAGTGCAAAAGTTTCTTTTACAGCAATGGCTCTTGAAGAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR-3UTR TCA 90 bp GAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATACTGATATATACATATaGGGCTTAGGAAGGAGGCAA +
Preference number: 2 (lower is better)
Translates to: EPWGLCPMARSQDFYQFHTDIYI*GLGRRQ
Trigger: TTGCCTCCTTCCTAAGCCTCATATGTATATATCAGT...ATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
3UTR-3UTR GCA 90 bp CAGGAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCTATTAGAACAGTATTaGTCTGTCATCTTGGACCAT +
Preference number: 2 (lower is better)
Translates to: QEPWGLCPMARSQDFYQFLLEQY*SVILDH
Trigger: ATGGTCCAAGATGACAGAGCAATACTGTTCTAATAG...GAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR-3UTR CCA 90 bp CCACTCTTCAAGAGCCATTGCTGTAAAAGAAACTTTTGCACTTACATATCAGGACTGAATCACTGGATGTaGCTGGACCGGCTGTCCAGA +
Preference number: 2 (lower is better)
Translates to: PLFKSHCCKRNFCTYISGLNHWM*LDRLSR
Trigger: TCTGGACAGCCGGTCCAGCCACATCCAGTGATTCAG...TCCTGATATGTAAGTGCAAAAGTTTCTTTTACAGCAATGGCTCTTGAAGAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR-3UTR CCA 90 bp GAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATAAAATGGAAGAAAGCTaGTCTCTAGCAACTTTGTGG +
Preference number: 2 (lower is better)
Translates to: EPWGLCPMARSQDFYQFHKMEES*SLATLW
Trigger: CCACAAAGTTGCTAGAGACCAGCTTTCTTCCATTTT...ATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR-3UTR CCA 90 bp GAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATCCAGGCCAATTCAATTaGTTATTAATCCTCACTCAC +
Preference number: 2 (lower is better)
Translates to: EPWGLCPMARSQDFYQFHPGQFN*LLILTH
Trigger: GTGAGTGAGGATTAATAACCAATTGAATTGGCCTGG...ATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR-3UTR TCA 90 bp TACCAGGCCAAATGTAAAGGGGACTTTCTCCTCTGTGGTGAGGCTAAATACCACACTGATATATACATATaGGGCTTAGGAAGGAGGCAA +
Preference number: 2 (lower is better)
Translates to: YQAKCKGDFLLCGEAKYHTDIYI*GLGRRQ
Trigger: TTGCCTCCTTCCTAAGCCTCATATGTATATATCAGT...GTGGTATTTAGCCTCACCACAGAGGAGAAAGTCCCCTTTACATTTGGCCTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR-3UTR GCA 90 bp AAAGAAACTGAGGATTTATCTAACTCTCTCTGGTCCTTCAGCCTAGTAACACTAGAGACAGGAGAGATATaGCAGAAGAGTATGTGGCCC +
Preference number: 2 (lower is better)
Translates to: KETEDLSNSLWSFSLVTLETGEI*QKSMWP
Trigger: GGGCCACATACTCTTCTGGCATATCTCTCCTGTCTC...TAGTGTTACTAGGCTGAAGGACCAGAGAGAGTTAGATAAATCCTCAGTTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR-3UTR CCA 90 bp CTACTGCCTCAAATGTTTACACATACTACTACCCCCATCTTCCCTAGTTGCTTTATTGCTCTGTCATCTTaGACCATAGTGAAGACCACC +
Preference number: 2 (lower is better)
Translates to: LLPQMFTHTTTPIFPSCFIALSS*TIVKTT
Trigger: GGTGGTCTTCACTATGGTCCAAGATGACAGAGCAAT...AAAGCAACTAGGGAAGATGGGGGTAGTAGTATGTGTAAACATTTGAGGCAGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR-3UTR TCA 90 bp CCACTCTTCAAGAGCCATTGCTGTAAAAGAAACTTTTGCACTTACATATCAGGAACCACCCCTAGGGAATaGCAGAATGGGAAAATGGAA +
Preference number: 2 (lower is better)
Translates to: PLFKSHCCKRNFCTYISGTTPRE*QNGKME
Trigger: TTCCATTTTCCCATTCTGTCATTCCCTAGGGGTGGT...TCCTGATATGTAAGTGCAAAAGTTTCTTTTACAGCAATGGCTCTTGAAGAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR-3UTR GCA 90 bp AGGGGGCTTGAGAATTTGCATTTCAAAGAAGTTCCAAGGGATGCTGATGCTGCTCAATTCCATGCTCTTTaGTTAAAACATAGAGAGCAG +
Preference number: 2 (lower is better)
Translates to: RGLENLHFKEVPRDADAAQFHAL*LKHREQ
Trigger: CTGCTCTCTATGTTTTAAGCAAAGAGCATGGAATTG...AGCAGCATCAGCATCCCTTGGAACTTCTTTGAAATGCAAATTCTCAAGCCCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR-3UTR CCA 90 bp ACAAATGAGATCATGGAGAGGTATGCAAGGGCTTCCAAGTTATCAATGATGTTCGTGGCTACCACCTACTaGCCATTTTTCTACTCTCTA +
Preference number: 2 (lower is better)
Translates to: TNEIMERYARASKLSMMFVATTY*PFFYSL
Trigger: TAGAGAGTAGAAAAATGGCCAGTAGGTGGTAGCCAC...GAACATCATTGATAACTTGGAAGCCCTTGCATACCTCTCCATGATCTCATTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR-3UTR CCA 90 bp CTACTGCCTCAAATGTTTACACATACTACTACCCCCATCTTCCCTAGTTGCTTTTTATCTAACTCTCTCTaGTCCTTCAGCCTAGTAACA +
Preference number: 2 (lower is better)
Translates to: LLPQMFTHTTTPIFPSCFLSNSL*SFSLVT
Trigger: TGTTACTAGGCTGAAGGACCAGAGAGAGTTAGATAA...AAAGCAACTAGGGAAGATGGGGGTAGTAGTATGTGTAAACATTTGAGGCAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR-3UTR CCA 90 bp ACAAATGAGATCATGGAGAGGTATGCAAGGGCTTCCAAGTTATCAATGATGTTCCGGAATTCTTTTAACTaGGAGAGAAATAAACTGCTT +
Preference number: 2 (lower is better)
Translates to: TNEIMERYARASKLSMMFRNSFN*ERNKLL
Trigger: AAGCAGTTTATTTCTCTCCCAGTTAAAAGAATTCCG...GAACATCATTGATAACTTGGAAGCCCTTGCATACCTCTCCATGATCTCATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR TCA 72 bp GATGCCACTGTGGCAACAGCCTGGCTGCTGGATCCCTaGGGCTTCCCATTCACCACTAGCAGGAGGGGCGTC +
Preference number: 3 (lower is better)
Translates to: DATVATAWLLDP*GFPFTTSRRGV
Trigger: GACGCCCCTCCTGCTAGTGGTGAATGGGAAGCCTCAGGGATCCAGCAGCCAGGCTGTTGCCACAGTGGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR GCA 72 bp ACTGTGGTCGCGATGCCACTGTGGCAACAGCCTGGCTaGTGGATCCCTGAGGCTTCCCATTCACCACTAGCA +
Preference number: 3 (lower is better)
Translates to: TVVAMPLWQQPG*WIPEASHSPLA
Trigger: TGCTAGTGGTGAATGGGAAGCCTCAGGGATCCAGCAGCCAGGCTGTTGCCACAGTGGCATCGCGACCACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR CCA 72 bp AAAACATTCCTCCCATCCCTGCTGAATCACTGGATGTaGCTGGACCGGCTGTCCAGAGCCTTGTCTCCTCTC +
Preference number: 3 (lower is better)
Translates to: KTFLPSLLNHWM*LDRLSRALSPL
Trigger: GAGAGGAGACAAGGCTCTGGACAGCCGGTCCAGCCACATCCAGTGATTCAGCAGGGATGGGAGGAATGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
3UTR CCA 72 bp CCTGTTGAGCATGCAAGTCAAAGGTCATTCACACTGTaGTCGCGATGCCACTGTGGCAACAGCCTGGCTGCT +
Preference number: 3 (lower is better)
Translates to: PVEHASQRSFTL*SRCHCGNSLAA
Trigger: AGCAGCCAGGCTGTTGCCACAGTGGCATCGCGACCACAGTGTGAATGACCTTTGACTTGCATGCTCAACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR-3UTR CAA 90 bp CAGGAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCGAATTCCAGAAGTTGTaGCTCTCGTTGCCGGGGCTC +
Preference number: 3 (lower is better)
Translates to: QEPWGLCPMARSQDFYQFEFQKL*LSLPGL
Trigger: GAGCCCCGGCAACGAGAGCAACAACTTCTGGAATTC...GAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR-3UTR CAA 90 bp CAGGAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCAGGAATTCCAGAAGTaGTTGCTCTCGTTGCCGGGG +
Preference number: 3 (lower is better)
Translates to: QEPWGLCPMARSQDFYQFQEFQK*LLSLPG
Trigger: CCCCGGCAACGAGAGCAACAACTTCTGGAATTCCTG...GAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR-3UTR CAA 90 bp AGCATGCAAGTCAAAGGTCATTCACACTGTGGTCGCGATGCCACTGTGGCAACAAGCGTACTCAGTGGCTaGAGCTCCAGGGTCACTTTC +
Preference number: 3 (lower is better)
Translates to: SMQVKGHSHCGRDATVATSVLSG*SSRVTF
Trigger: GAAAGTGACCCTGGAGCTCAAGCCACTGAGTACGCT...TGTTGCCACAGTGGCATCGCGACCACAGTGTGAATGACCTTTGACTTGCATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR TCA 72 bp GCAGGTTGGGCTCAGGAATGGCTACAGAGTCTCCAATaGGCACTCCCCAGCTCTGCACTATATTGTACACCA +
Preference number: 3 (lower is better)
Translates to: AGWAQEWLQSLQ*ALPSSALYCTP
Trigger: TGGTGTACAATATAGTGCAGAGCTGGGGAGTGCTCATTGGAGACTCTGTAGCCATTCCTGAGCCCAACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR CCA 72 bp GGAGGCAACAACAGGAACCTTGGGGACTCTGTCCCATaGCAAGATCCCAAGACTTCTACCAATTCCATGCTC +
Preference number: 3 (lower is better)
Translates to: GGNNRNLGDSVP*QDPKTSTNSML
Trigger: GAGCATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTCCTGTTGTTGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
3UTR-3UTR CAA 90 bp TACCAGGCCAAATGTAAAGGGGACTTTCTCCTCTGTGGTGAGGCTAAATACCACGTCAACTTTCTCTGCTaGGGCATAGGCACTGAGGGC +
Preference number: 3 (lower is better)
Translates to: YQAKCKGDFLLCGEAKYHVNFLC*GIGTEG
Trigger: GCCCTCAGTGCCTATGCCCAAGCAGAGAAAGTTGAC...GTGGTATTTAGCCTCACCACAGAGGAGAAAGTCCCCTTTACATTTGGCCTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR CCA 72 bp TCATTTAAAACATTCCTCCCATCCCTGCTGAATCACTaGATGTGGCTGGACCGGCTGTCCAGAGCCTTGTCT +
Preference number: 3 (lower is better)
Translates to: SFKTFLPSLLNH*MWLDRLSRALS
Trigger: AGACAAGGCTCTGGACAGCCGGTCCAGCCACATCCAGTGATTCAGCAGGGATGGGAGGAATGTTTTAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
3UTR CCA 72 bp GTGGAAGAGACAGGAGAGATATGCCAGAAGAGTATGTaGCCCTGTAGAGAGCTGGAACATGATGAGGACAGA +
Preference number: 3 (lower is better)
Translates to: VEETGEICQKSM*PCRELEHDEDR
Trigger: TCTGTCCTCATCATGTTCCAGCTCTCTACAGGGCCACATACTCTTCTGGCATATCTCTCCTGTCTCTTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
3UTR CCA 72 bp TCACCACTAGCAGGAGGGGCGTCTCCACTCGAACACTaGAAAAGGAATAGTCCTTTCCTTTGTGCTGAATTC +
Preference number: 3 (lower is better)
Translates to: SPLAGGASPLEH*KRNSPFLCAEF
Trigger: GAATTCAGCACAAAGGAAAGGACTATTCCTTTTCCAGTGTTCGAGTGGAGACGCCCCTCCTGCTAGTGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR-3UTR CAA 90 bp AGGGGGCTTGAGAATTTGCATTTCAAAGAAGTTCCAAGGGATGCTGATGCTGCTCGGAGTTTCACCATCTaGGCCAGGCTGATCTTGAAC +
Preference number: 3 (lower is better)
Translates to: RGLENLHFKEVPRDADAARSFTI*ARLILN
Trigger: GTTCAAGATCAGCCTGGCCAAGATGGTGAAACTCCG...AGCAGCATCAGCATCCCTTGGAACTTCTTTGAAATGCAAATTCTCAAGCCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR GCA 72 bp CAAATTTTACTGTGCATCAGAGTCACCTGGAGGGTTTaGGAAACACAGATTGCTGGGCTCCTCCCACATAGT +
Preference number: 3 (lower is better)
Translates to: QILLCIRVTWRV*ETQIAGLLPHS
Trigger: ACTATGTGGGAGGAGCCCAGCAATCTGTGTTTCGCAAACCCTCCAGGTGACTCTGATGCACAGTAAAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR CCA 72 bp TCAAAGAAGTTCCAAGGGATGCTGATGCTGCTGGTCTaGGAACCACTCTTCAAGAGCCATTGCTGTAAAAGA +
Preference number: 3 (lower is better)
Translates to: SKKFQGMLMLLV*EPLFKSHCCKR
Trigger: TCTTTTACAGCAATGGCTCTTGAAGAGTGGTTCCCAGACCAGCAGCATCAGCATCCCTTGGAACTTCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR GCA 72 bp TGGTCCTTCAGCCTAGTAACACTATTAGAACAGTATTaGTCTGTCATCTTGGACCATAGTGAAGACCACCCC +
Preference number: 3 (lower is better)
Translates to: WSFSLVTLLEQY*SVILDHSEDHP
Trigger: GGGGTGGTCTTCACTATGGTCCAAGATGACAGAGCAATACTGTTCTAATAGTGTTACTAGGCTGAAGGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR-3UTR CAA 90 bp CTACTGCCTCAAATGTTTACACATACTACTACCCCCATCTTCCCTAGTTGCTTTACAGCCATTCAGTTGTaGTTGCTGTTTGAGACGGAG +
Preference number: 3 (lower is better)
Translates to: LLPQMFTHTTTPIFPSCFTAIQL*LLFETE
Trigger: CTCCGTCTCAAACAGCAACAACAACTGAATGGCTGT...AAAGCAACTAGGGAAGATGGGGGTAGTAGTATGTGTAAACATTTGAGGCAGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR GCA 72 bp GCAAGATCCCAAGACTTCTACCAATTCCATGCTCTTTaGTTAAAACATAGAGAGCAGTGGAAGAGACAGGAG +
Preference number: 3 (lower is better)
Translates to: ARSQDFYQFHAL*LKHREQWKRQE
Trigger: CTCCTGTCTCTTCCACTGCTCTCTATGTTTTAAGCAAAGAGCATGGAATTGGTAGAAGTCTTGGGATCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
3UTR TCA 72 bp AGCCCTACACAGAACATGTCAACTCATCTCAGAATTTaGGTAAAAGGGGAACAGTATTTGGGTCCCACATCT +
Preference number: 3 (lower is better)
Translates to: SPTQNMSTHLRI*VKGEQYLGPTS
Trigger: AGATGTGGGACCCAAATACTGTTCCCCTTTTACTCAAATTCTGAGATGAGTTGACATGTTCTGTGTAGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR TCA 72 bp CTCTCTTCATATTTATGCAACGTCGCCCTGTTCAGATaGAGGTCAGGATTGCTAGAAGCTTTTCTGTCAACT +
Preference number: 3 (lower is better)
Translates to: LSSYLCNVALFR*RSGLLEAFLST
Trigger: AGTTGACAGAAAAGCTTCTAGCAATCCTGACCTTCATCTGAACAGGGCGACGTTGCATAAATATGAAGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
3UTR GCA 72 bp ATGCTGCTGGTCTGGGAACCACTCTTCAAGAGCCATTaGTGTAAAAGAAACTTTTGCACTTACATATCAGGA +
Preference number: 3 (lower is better)
Translates to: MLLVWEPLFKSH*CKRNFCTYISG
Trigger: TCCTGATATGTAAGTGCAAAAGTTTCTTTTACAGCAATGGCTCTTGAAGAGTGGTTCCCAGACCAGCAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR TCA 72 bp GAGTCATCAATGATATTCAAGGCACTGATCAAAAACTaGACAGGACTGGACCAAGAACAAAGATCTGAGCCA +
Preference number: 3 (lower is better)
Translates to: ESSMIFKALIKN*TGLDQEQRSEP
Trigger: TGGCTCAGATCTTTGTTCTTGGTCCAGTCCTGTTCAGTTTTTGATCAGTGCCTTGAATATCATTGATGACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR TCA 72 bp ACTTCTCTCATCAATGCATTTCTACCATCCATTCTCTaGGGAGGCCTCTGCACTCTTTATAAATTTAATGAG +
Preference number: 3 (lower is better)
Translates to: TSLINAFLPSIL*GGLCTLYKFNE
Trigger: CTCATTAAATTTATAAAGAGTGCAGAGGCCTCCTCAGAGAATGGATGGTAGAAATGCATTGATGAGAGAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR GCA 72 bp ATGTTTACACATACTACTACCCCCATCTTCCCTAGTTaGTTTCAGCCAATTCTCAAGTTATTTTTATACCCC +
Preference number: 3 (lower is better)
Translates to: MFTHTTTPIFPS*FQPILKLFLYP
Trigger: GGGGTATAAAAATAACTTGAGAATTGGCTGAAAGCAACTAGGGAAGATGGGGGTAGTAGTATGTGTAAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR CCA 72 bp GACTCTAAAGAAACTGAGGATTTATCTAACTCTCTCTaGTCCTTCAGCCTAGTAACACTATTAGAACAGTAT +
Preference number: 3 (lower is better)
Translates to: DSKETEDLSNSL*SFSLVTLLEQY
Trigger: ATACTGTTCTAATAGTGTTACTAGGCTGAAGGACCAGAGAGAGTTAGATAAATCCTCAGTTTCTTTAGAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR TCA 72 bp GACAAACGATTAGTACAGGGAATATATAAATCAATTTaGCATCCAATACAGCAGTGTGCAAAGACTCGAATA +
Preference number: 3 (lower is better)
Translates to: DKRLVQGIYKSI*HPIQQCAKTRI
Trigger: TATTCGAGTCTTTGCACACTGCTGTATTGGATGTCAAATTGATTTATATATTCCCTGTACTAATCGTTTGTC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR GCA 90 bp TCCCAGGATGACGGCACCGCTGTTCACCCCAGGCTGAAGCGTACTCAGTGGCTTGGCAGGGTCCAGGGCTaGAGCCCGAGAGAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: SQDDGTAVHPRLKRTQWLGRVQG*SPREAL
Trigger: GAGGGCTTCTCTCGGGCTGCAGCCCTGGACCCTGCC...AAGCCACTGAGTACGCTTCAGCCTGGGGTGAACAGCGGTGCCGTCATCCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
CDS-3UTR TCA 90 bp CTGAATCACTGGATGTGGCTGGACCGGCTGTCCAGAGCCTTGTCTCCTCTCCTCTCCTCCCATCCCTGCTaGATCACTGGATGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LNHWMWLDRLSRALSPLLSSHPC*ITGCGW
Trigger: CCAGCCACATCCAGTGATTCAGCAGGGATGGGAGGA...GAGGAGAGGAGACAAGGCTCTGGACAGCCGGTCCAGCCACATCCAGTGATTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
CDS-3UTR CCA 90 bp CCACTGTGGCAACAGCCTGGCTGCTGGATCCCTGAGGCTTCCCATTCACCACTATGTTCCTGCACCAGCTaGTTCCAGGCTTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: PLWQQPGCWIPEASHSPLCSCTS*FQASTS
Trigger: GCTGGTGGAAGCCTGGAACCAGCTGGTGCAGGAACA...TAGTGGTGAATGGGAAGCCTCAGGGATCCAGCAGCCAGGCTGTTGCCACAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383029.7
CDS-3UTR GCA 90 bp GAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATGGCAGGGTCCAGGGCTaGAGCCCGAGAGAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: EPWGLCPMARSQDFYQFHGRVQG*SPREAL
Trigger: GAGGGCTTCTCTCGGGCTGCAGCCCTGGACCCTGCC...ATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
CDS-3UTR TCA 90 bp TCCCAGGATGACGGCACCGCTGTTCACCCCAGGCTGAAGCGTACTCAGTGGCTTGTCGCCCTGTTCAGATaGAGGTCAGGATTGCTAGAA +
Preference number: 4 (lower is better)
Translates to: SQDDGTAVHPRLKRTQWLVALFR*RSGLLE
Trigger: TTCTAGCAATCCTGACCTTCATCTGAACAGGGCGAC...AAGCCACTGAGTACGCTTCAGCCTGGGGTGAACAGCGGTGCCGTCATCCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
CDS-3UTR TCA 90 bp AAATACCACCTTTCCCAGGATGACGGCACCGCTGTTCACCCCAGGCTGAAGCGTCTACAGAGTCTCCAATaGGCACTCCCCAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: KYHLSQDDGTAVHPRLKRLQSLQ*ALPSSA
Trigger: TGCAGAGCTGGGGAGTGCTCATTGGAGACTCTGTAG...ACGCTTCAGCCTGGGGTGAACAGCGGTGCCGTCATCCTGGGAAAGGTGGTATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383029.7
CDS-3UTR CCA 90 bp AAATACCACCTTTCCCAGGATGACGGCACCGCTGTTCACCCCAGGCTGAAGCGTAGGTCATTCACACTGTaGTCGCGATGCCACTGTGGC +
Preference number: 4 (lower is better)
Translates to: KYHLSQDDGTAVHPRLKRRSFTL*SRCHCG
Trigger: GCCACAGTGGCATCGCGACCACAGTGTGAATGACCT...ACGCTTCAGCCTGGGGTGAACAGCGGTGCCGTCATCCTGGGAAAGGTGGTATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
CDS-3UTR TCA 90 bp GAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATCCACCTTTCCCAGGATaGCGGCACCGCTGTTCACCC +
Preference number: 4 (lower is better)
Translates to: EPWGLCPMARSQDFYQFHPPFPG*RHRCSP
Trigger: GGGTGAACAGCGGTGCCGTCATCCTGGGAAAGGTGG...ATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
CDS-3UTR GCA 90 bp CCACTGTGGCAACAGCCTGGCTGCTGGATCCCTGAGGCTTCCCATTCACCACTAAATTCCAGAAGTTGTTaGTCTCGTTGCCGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PLWQQPGCWIPEASHSPLNSRSC*SRCRGS
Trigger: AGAGCCCCGGCAACGAGAGCAACAACTTCTGGAATT...TAGTGGTGAATGGGAAGCCTCAGGGATCCAGCAGCCAGGCTGTTGCCACAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
CDS-3UTR GCA 90 bp CTGAATCACTGGATGTGGCTGGACCGGCTGTCCAGAGCCTTGTCTCCTCTCCTCCTTCCCAGCATGCTCTaGAGCTTTTTGGTCTTCACC +
Preference number: 4 (lower is better)
Translates to: LNHWMWLDRLSRALSPLLLPSML*SFLVFT
Trigger: GGTGAAGACCAAAAAGCTGCAGAGCATGCTGGGAAG...GAGGAGAGGAGACAAGGCTCTGGACAGCCGGTCCAGCCACATCCAGTGATTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
CDS-3UTR GCA 90 bp GTCATTCACACTGTGGTCGCGATGCCACTGTGGCAACAGCCTGGCTGCTGGATCCTTCCCAGCATGCTCTaGAGCTTTTTGGTCTTCACC +
Preference number: 4 (lower is better)
Translates to: VIHTVVAMPLWQQPGCWILPSML*SFLVFT
Trigger: GGTGAAGACCAAAAAGCTGCAGAGCATGCTGGGAAG...GATCCAGCAGCCAGGCTGTTGCCACAGTGGCATCGCGACCACAGTGTGAATGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383029.7
CDS-3UTR GCA 90 bp GTCATTCACACTGTGGTCGCGATGCCACTGTGGCAACAGCCTGGCTGCTGGATCGAGACAGGAGAGATATaGCAGAAGAGTATGTGGCCC +
Preference number: 4 (lower is better)
Translates to: VIHTVVAMPLWQQPGCWIETGEI*QKSMWP
Trigger: GGGCCACATACTCTTCTGGCATATCTCTCCTGTCTC...GATCCAGCAGCCAGGCTGTTGCCACAGTGGCATCGCGACCACAGTGTGAATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383029.7
CDS-3UTR TCA 90 bp CTGAATCACTGGATGTGGCTGGACCGGCTGTCCAGAGCCTTGTCTCCTCTCCTCTCTGCAAGATCGGCTTaGCTTCTTCCTCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: LNHWMWLDRLSRALSPLLSARSA*LLPLHQ
Trigger: CTGATGAAGAGGAAGAAGTCAAGCCGATCTTGCAGA...GAGGAGAGGAGACAAGGCTCTGGACAGCCGGTCCAGCCACATCCAGTGATTCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
CDS-3UTR TCA 90 bp CAGGAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCGTGTCAGTCCGCAGCTaGCGAAGCACCATTGACAGG +
Preference number: 4 (lower is better)
Translates to: QEPWGLCPMARSQDFYQFVSVRS*RSTIDR
Trigger: CCTGTCAATGGTGCTTCGTCAGCTGCGGACTGACAC...GAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
CDS-3UTR TCA 90 bp CTGAATCACTGGATGTGGCTGGACCGGCTGTCCAGAGCCTTGTCTCCTCTCCTCTCATGGACATCCATCTaGACAGCCAACTTAGCCTGT +
Preference number: 4 (lower is better)
Translates to: LNHWMWLDRLSRALSPLLSWTSI*TANLAC
Trigger: ACAGGCTAAGTTGGCTGTTCAGATGGATGTCCATGA...GAGGAGAGGAGACAAGGCTCTGGACAGCCGGTCCAGCCACATCCAGTGATTCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
CDS-3UTR TCA 90 bp ACAGGAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTTGTTCCTGCAATGGGTaGGGGCTCCTGAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: TGTLGTLSHGKIPRLLPICSCNG*GLLRSR
Trigger: CCTGCTTCTCAGGAGCCCTCACCCATTGCAGGAACA...AATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR TCA 90 bp CCACTGTGGCAACAGCCTGGCTGCTGGATCCCTGAGGCTTCCCATTCACCACTAATAGCAAGGTCCATCTaGATCTACCAGGCCAAATGT +
Preference number: 4 (lower is better)
Translates to: PLWQQPGCWIPEASHSPLIARSI*IYQAKC
Trigger: ACATTTGGCCTGGTAGATTCAGATGGACCTTGCTAT...TAGTGGTGAATGGGAAGCCTCAGGGATCCAGCAGCCAGGCTGTTGCCACAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383029.7
CDS-3UTR TCA 90 bp AATGGAAGAAAGCTGGTCTCTAGCAACTTTGTGGAGTTGCCATTCCTGCCTGGGTGGCTGCTGGATCCCTaGGGCTTCCCATTCACCACT +
Preference number: 4 (lower is better)
Translates to: NGRKLVSSNFVELPFLPGWLLDP*GFPFTT
Trigger: AGTGGTGAATGGGAAGCCTCAGGGATCCAGCAGCCA...CCCAGGCAGGAATGGCAACTCCACAAAGTTGCTAGAGACCAGCTTTCTTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR TCA 90 bp CATCTGAACAGCCAACTTAGCCTGTCGGACACTGTCCATGACATGGTGAGAATGTGGCTGCTGGATCCCTaGGGCTTCCCATTCACCACT +
Preference number: 4 (lower is better)
Translates to: HLNSQLSLSDTVHDMVRMWLLDP*GFPFTT
Trigger: AGTGGTGAATGGGAAGCCTCAGGGATCCAGCAGCCA...CATTCTCACCATGTCATGGACAGTGTCCGACAGGCTAAGTTGGCTGTTCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383029.7
CDS-3UTR TCA 90 bp AATGGAAGAAAGCTGGTCTCTAGCAACTTTGTGGAGTTGCCATTCCTGCCTGGGCTGATCTTGAACTCCTaGCCTCGTGATCCACCCGCC +
Preference number: 4 (lower is better)
Translates to: NGRKLVSSNFVELPFLPGLILNS*PRDPPA
Trigger: GGCGGGTGGATCACGAGGTCAGGAGTTCAAGATCAG...CCCAGGCAGGAATGGCAACTCCACAAAGTTGCTAGAGACCAGCTTTCTTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR GCA 90 bp AAATACCACCTTTCCCAGGATGACGGCACCGCTGTTCACCCCAGGCTGAAGCGTAGCACTCCCCAGCTCTaGACTATATTGTACACCATC +
Preference number: 4 (lower is better)
Translates to: KYHLSQDDGTAVHPRLKRSTPQL*TILYTI
Trigger: GATGGTGTACAATATAGTGCAGAGCTGGGGAGTGCT...ACGCTTCAGCCTGGGGTGAACAGCGGTGCCGTCATCCTGGGAAAGGTGGTATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383029.7
CDS-3UTR GCA 90 bp ACCAGGCCAAATGTAAAGGGGACTTTCTCCTCTGTGGTGAGGCTAAATACCACCACACTGTGGTCGCGATaGCACTGTGGCAACAGCCTG +
Preference number: 4 (lower is better)
Translates to: TRPNVKGTFSSVVRLNTTTLWSR*HCGNSL
Trigger: CAGGCTGTTGCCACAGTGGCATCGCGACCACAGTGT...GGTGGTATTTAGCCTCACCACAGAGGAGAAAGTCCCCTTTACATTTGGCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
CDS-3UTR CCA 90 bp ACCAGGCCAAATGTAAAGGGGACTTTCTCCTCTGTGGTGAGGCTAAATACCACCGGTGAAGCCGCAGGTTaGGCTCAGGAATGGCTACAG +
Preference number: 4 (lower is better)
Translates to: TRPNVKGTFSSVVRLNTTGEAAG*AQEWLQ
Trigger: CTGTAGCCATTCCTGAGCCCAACCTGCGGCTTCACC...GGTGGTATTTAGCCTCACCACAGAGGAGAAAGTCCCCTTTACATTTGGCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
CDS-3UTR CCA 90 bp ACAGGAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTTCCCTGCTGAATCACTaGATGTGGCTGGACCGGCTG +
Preference number: 4 (lower is better)
Translates to: TGTLGTLSHGKIPRLLPISLLNH*MWLDRL
Trigger: CAGCCGGTCCAGCCACATCCAGTGATTCAGCAGGGA...AATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
CDS-3UTR TCA 90 bp CAGGCCAAATGTAAAGGGGACTTTCTCCTCTGTGGTGAGGCTAAATACCACCTTGTGTCAGTCCGCAGCTaGCGAAGCACCATTGACAGG +
Preference number: 4 (lower is better)
Translates to: QAKCKGDFLLCGEAKYHLVSVRS*RSTIDR
Trigger: CCTGTCAATGGTGCTTCGTCAGCTGCGGACTGACAC...AAGGTGGTATTTAGCCTCACCACAGAGGAGAAAGTCCCCTTTACATTTGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
CDS-3UTR TCA 90 bp CCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATGCTTCCTCCACTCCCTGTTaGGCATGCAAGTCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: PWGLCPMARSQDFYQFHASSTPC*ACKSKV
Trigger: GACCTTTGACTTGCATGCTCAACAGGGAGTGGAGGA...AGCATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
CDS-3UTR TCA 90 bp CCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATGCTCTACCATCCATTCTCTaGGGAGGCCTCTGCACTCTT +
Preference number: 4 (lower is better)
Translates to: PWGLCPMARSQDFYQFHALPSIL*GGLCTL
Trigger: AAGAGTGCAGAGGCCTCCTCAGAGAATGGATGGTAG...AGCATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR TCA 90 bp GAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATAGTTCCAAGGGATGCTaGTGCTGCTGGTCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: EPWGLCPMARSQDFYQFHSSKGC*CCWSGN
Trigger: GTTCCCAGACCAGCAGCATCAGCATCCCTTGGAACT...ATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR GCA 90 bp CCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATGCTGTTCAAGCAATTCTCTaGCTCAGCCTCCCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: PWGLCPMARSQDFYQFHAVQAIL*LSLPSS
Trigger: GCTACTGGGGAGGCTGAGGCAGAGAATTGCTTGAAC...AGCATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CCA 90 bp CATCTGAACAGCCAACTTAGCCTGTCGGACACTGTCCATGACATGGTGAGAATGCTGAATCACTGGATGTaGCTGGACCGGCTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: HLNSQLSLSDTVHDMVRMLNHWM*LDRLSR
Trigger: TCTGGACAGCCGGTCCAGCCACATCCAGTGATTCAG...CATTCTCACCATGTCATGGACAGTGTCCGACAGGCTAAGTTGGCTGTTCAGATG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383029.7
CDS-3UTR CCA 90 bp AGCCCGAGAGAAGCCCTCCAGGGCCTCCCCATAACTCTCTTCATATTTATGCAAGGGGACTCTGTCCCATaGCAAGATCCCAAGACTTCT +
Preference number: 4 (lower is better)
Translates to: SPREALQGLPITLFIFMQGDSVP*QDPKTS
Trigger: AGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCC...TTGCATAAATATGAAGAGAGTTATGGGGAGGCCCTGGAGGGCTTCTCTCGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383029.7
CDS-3UTR CCA 90 bp CAGGAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATGCTGGAGTGCAGTaGCATGATATCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: QEPWGLCPMARSQDFYQFHAGVQ*HDIGSL
Trigger: CAGTGAGCCGATATCATGCCACTGCACTCCAGCATG...GAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR TCA 90 bp CCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATGCTCTGACGAAGCACCATTaGCAGGTTTTGCAAGGAGAC +
Preference number: 4 (lower is better)
Translates to: PWGLCPMARSQDFYQFHALTKHH*QVLQGD
Trigger: GTCTCCTTGCAAAACCTGTCAATGGTGCTTCGTCAG...AGCATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
CDS-3UTR TCA 90 bp GAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATTCCTCCACTCCCTGTTaGGCATGCAAGTCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: EPWGLCPMARSQDFYQFHSSTPC*ACKSKV
Trigger: GACCTTTGACTTGCATGCTCAACAGGGAGTGGAGGA...ATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
CDS-3UTR TCA 90 bp CTGAATCACTGGATGTGGCTGGACCGGCTGTCCAGAGCCTTGTCTCCTCTCCTCACTGATATATACATATaGGGCTTAGGAAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: LNHWMWLDRLSRALSPLLTDIYI*GLGRRQ
Trigger: TTGCCTCCTTCCTAAGCCTCATATGTATATATCAGT...GAGGAGAGGAGACAAGGCTCTGGACAGCCGGTCCAGCCACATCCAGTGATTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
CDS-3UTR GCA 90 bp AGGGGGCTTGAGAATTTGCATTTCAAAGAAGTTCCAAGGGATGCTGATGCTGCTACACTGTGGTCGCGATaGCACTGTGGCAACAGCCTG +
Preference number: 4 (lower is better)
Translates to: RGLENLHFKEVPRDADAATLWSR*HCGNSL
Trigger: CAGGCTGTTGCCACAGTGGCATCGCGACCACAGTGT...AGCAGCATCAGCATCCCTTGGAACTTCTTTGAAATGCAAATTCTCAAGCCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CCA 90 bp CCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATGCTACTTGTGCCTTGCCCTaGACAGAACCCACTACTTCT +
Preference number: 4 (lower is better)
Translates to: PWGLCPMARSQDFYQFHATCALP*TEPTTS
Trigger: AGAAGTAGTGGGTTCTGTCCAGGGCAAGGCACAAGT...AGCATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
CDS-3UTR CCA 90 bp CAGGCCAAATGTAAAGGGGACTTTCTCCTCTGTGGTGAGGCTAAATACCACCTTCTGAAGCGTACTCAGTaGCTTGAGCTCCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: QAKCKGDFLLCGEAKYHLLKRTQ*LELQGH
Trigger: GTGACCCTGGAGCTCAAGCCACTGAGTACGCTTCAG...AAGGTGGTATTTAGCCTCACCACAGAGGAGAAAGTCCCCTTTACATTTGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
CDS-3UTR CCA 90 bp AAATACCACCTTTCCCAGGATGACGGCACCGCTGTTCACCCCAGGCTGAAGCGTTCTCCACTCGAACACTaGAAAAGGAATAGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: KYHLSQDDGTAVHPRLKRSPLEH*KRNSPF
Trigger: GAAAGGACTATTCCTTTTCCAGTGTTCGAGTGGAGA...ACGCTTCAGCCTGGGGTGAACAGCGGTGCCGTCATCCTGGGAAAGGTGGTATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383029.7
CDS-3UTR CCA 90 bp CAGGAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCTGCCAGAAGAGTATGTaGCCCTGTAGAGAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: QEPWGLCPMARSQDFYQFCQKSM*PCRELE
Trigger: TTCCAGCTCTCTACAGGGCCACATACTCTTCTGGCA...GAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
3UTR CAA 72 bp CATATGAGGCTTAGGAAGGAGGCAACAACAGGAACCTaGGGGACTCTGTCCCATGGCAAGATCCCAAGACTT +
Preference number: 4 (lower is better)
Translates to: HMRLRKEATTGT*GTLSHGKIPRL
Trigger: AAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTCCTGTTGTTGCCTCCTTCCTAAGCCTCATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
CDS-3UTR TCA 90 bp GAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATCTGACGAAGCACCATTaGCAGGTTTTGCAAGGAGAC +
Preference number: 4 (lower is better)
Translates to: EPWGLCPMARSQDFYQFHLTKHH*QVLQGD
Trigger: GTCTCCTTGCAAAACCTGTCAATGGTGCTTCGTCAG...ATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
CDS-3UTR TCA 90 bp CCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATGCTGTCGGACACTGTCCATaGCATGGTGAGAATGTTCAT +
Preference number: 4 (lower is better)
Translates to: PWGLCPMARSQDFYQFHAVGHCP*HGENVH
Trigger: ATGAACATTCTCACCATGTCATGGACAGTGTCCGAC...AGCATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
CDS-3UTR TCA 90 bp GAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATGTCGCCCTGTTCAGATaGAGGTCAGGATTGCTAGAA +
Preference number: 4 (lower is better)
Translates to: EPWGLCPMARSQDFYQFHVALFR*RSGLLE
Trigger: TTCTAGCAATCCTGACCTTCATCTGAACAGGGCGAC...ATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
CDS-3UTR TCA 90 bp TACCAGGCCAAATGTAAAGGGGACTTTCTCCTCTGTGGTGAGGCTAAATACCACTTTCTGCCCAGAGGCTaGCTGATAGTGCCCATCACT +
Preference number: 4 (lower is better)
Translates to: YQAKCKGDFLLCGEAKYHFLPRG*LIVPIT
Trigger: AGTGATGGGCACTATCAGTCAGCCTCTGGGCAGAAA...GTGGTATTTAGCCTCACCACAGAGGAGAAAGTCCCCTTTACATTTGGCCTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
CDS-3UTR TCA 90 bp ACAAATGAGATCATGGAGAGGTATGCAAGGGCTTCCAAGTTATCAATGATGTTCCCACCTTTCCCAGGATaGCGGCACCGCTGTTCACCC +
Preference number: 4 (lower is better)
Translates to: TNEIMERYARASKLSMMFPPFPG*RHRCSP
Trigger: GGGTGAACAGCGGTGCCGTCATCCTGGGAAAGGTGG...GAACATCATTGATAACTTGGAAGCCCTTGCATACCTCTCCATGATCTCATTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR GCA 90 bp CTGAATCACTGGATGTGGCTGGACCGGCTGTCCAGAGCCTTGTCTCCTCTCCTCCAATTCCATGCTCTTTaGTTAAAACATAGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: LNHWMWLDRLSRALSPLLQFHAL*LKHREQ
Trigger: CTGCTCTCTATGTTTTAAGCAAAGAGCATGGAATTG...GAGGAGAGGAGACAAGGCTCTGGACAGCCGGTCCAGCCACATCCAGTGATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
CDS-3UTR GCA 90 bp CTGAATCACTGGATGTGGCTGGACCGGCTGTCCAGAGCCTTGTCTCCTCTCCTCCTATTAGAACAGTATTaGTCTGTCATCTTGGACCAT +
Preference number: 4 (lower is better)
Translates to: LNHWMWLDRLSRALSPLLLLEQY*SVILDH
Trigger: ATGGTCCAAGATGACAGAGCAATACTGTTCTAATAG...GAGGAGAGGAGACAAGGCTCTGGACAGCCGGTCCAGCCACATCCAGTGATTCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CCA 90 bp GAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATACTTGTGCCTTGCCCTaGACAGAACCCACTACTTCT +
Preference number: 4 (lower is better)
Translates to: EPWGLCPMARSQDFYQFHTCALP*TEPTTS
Trigger: AGAAGTAGTGGGTTCTGTCCAGGGCAAGGCACAAGT...ATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
CDS-3UTR CCA 90 bp CTGGCCATTTTTCTACTCTCTAGCCCTACACAGAACATGTCAACTCATCTCAGAATCACTGGATGTGGCTaGACCGGCTGTCCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: LAIFLLSSPTQNMSTHLRITGCG*TGCPEP
Trigger: AGGCTCTGGACAGCCGGTCCAGCCACATCCAGTGAT...TCTGAGATGAGTTGACATGTTCTGTGTAGGGCTAGAGAGTAGAAAAATGGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR GCA 90 bp ACAGGAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTTTAGAACTTGTGCCTTaGCCTGGACAGAACCCACTA +
Preference number: 4 (lower is better)
Translates to: TGTLGTLSHGKIPRLLPILELVP*PGQNPL
Trigger: TAGTGGGTTCTGTCCAGGGCAAGGCACAAGTTCTAA...AATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
CDS-3UTR GCA 90 bp TACCAGGCCAAATGTAAAGGGGACTTTCTCCTCTGTGGTGAGGCTAAATACCACGCAAGCTTCCCAGCATaGTCTGCAGCTTTTTGGTCT +
Preference number: 4 (lower is better)
Translates to: YQAKCKGDFLLCGEAKYHASFPA*SAAFWS
Trigger: AGACCAAAAAGCTGCAGAGCATGCTGGGAAGCTTGC...GTGGTATTTAGCCTCACCACAGAGGAGAAAGTCCCCTTTACATTTGGCCTGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383029.7
CDS-3UTR GCA 90 bp CCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATGCTCCCATCTTCCCTAGTTaGTTTCAGCCAATTCTCAAG +
Preference number: 4 (lower is better)
Translates to: PWGLCPMARSQDFYQFHAPIFPS*FQPILK
Trigger: CTTGAGAATTGGCTGAAAGCAACTAGGGAAGATGGG...AGCATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CCA 90 bp ACAGGAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTAAGGGGAACAGTATTTaGGTCCCACATCTCTACTGC +
Preference number: 4 (lower is better)
Translates to: TGTLGTLSHGKIPRLLPIKGNSI*VPHLYC
Trigger: GCAGTAGAGATGTGGGACCCAAATACTGTTCCCCTT...AATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CCA 90 bp AGGGGGCTTGAGAATTTGCATTTCAAAGAAGTTCCAAGGGATGCTGATGCTGCTCTGATGCTGCTGGTCTaGGAACCACTCTTCAAGAGC +
Preference number: 4 (lower is better)
Translates to: RGLENLHFKEVPRDADAALMLLV*EPLFKS
Trigger: GCTCTTGAAGAGTGGTTCCCAGACCAGCAGCATCAG...AGCAGCATCAGCATCCCTTGGAACTTCTTTGAAATGCAAATTCTCAAGCCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR CAA 72 bp GCGAAACACAGATTGCTGGGCTCCTCCCACATAGTTTaGAATTCAGTAAGTCTGGGTAGGGGGCTTGAGAAT +
Preference number: 4 (lower is better)
Translates to: AKHRLLGSSHIV*NSVSLGRGLEN
Trigger: ATTCTCAAGCCCCCTACCCAGACTTACTGAATTCAAAACTATGTGGGAGGAGCCCAGCAATCTGTGTTTCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR TCA 90 bp TCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATGCTCTTTGCTTAAAACAGCGTACTCAGTGGCTTaGGCTCCAGGGTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: SHGKIPRLLPIPCSLLKTAYSVA*APGSLS
Trigger: AGAAAGTGACCCTGGAGCTCAAGCCACTGAGTACGC...TGTTTTAAGCAAAGAGCATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
CDS-3UTR GCA 90 bp CTACTGCCTCAAATGTTTACACATACTACTACCCCCATCTTCCCTAGTTGCTTTGCAACTTTGTGGAGTTaGCATTCCTGCCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LLPQMFTHTTTPIFPSCFATLWS*HSCLGL
Trigger: CAGCCCCAGGCAGGAATGGCAACTCCACAAAGTTGC...AAAGCAACTAGGGAAGATGGGGGTAGTAGTATGTGTAAACATTTGAGGCAGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CCA 90 bp ACAAATGAGATCATGGAGAGGTATGCAAGGGCTTCCAAGTTATCAATGATGTTCGGTGAAGCCGCAGGTTaGGCTCAGGAATGGCTACAG +
Preference number: 4 (lower is better)
Translates to: TNEIMERYARASKLSMMFGEAAG*AQEWLQ
Trigger: CTGTAGCCATTCCTGAGCCCAACCTGCGGCTTCACC...GAACATCATTGATAACTTGGAAGCCCTTGCATACCTCTCCATGATCTCATTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CCA 90 bp CTACTGCCTCAAATGTTTACACATACTACTACCCCCATCTTCCCTAGTTGCTTTCTGAATCACTGGATGTaGCTGGACCGGCTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: LLPQMFTHTTTPIFPSCFLNHWM*LDRLSR
Trigger: TCTGGACAGCCGGTCCAGCCACATCCAGTGATTCAG...AAAGCAACTAGGGAAGATGGGGGTAGTAGTATGTGTAAACATTTGAGGCAGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CCA 90 bp TGCCTGGGGCTGTCTATTGTCGGAATTCTTTTAACTGGGAGAGAAATAAACTGCGGGGACTCTGTCCCATaGCAAGATCCCAAGACTTCT +
Preference number: 4 (lower is better)
Translates to: CLGLSIVGILLTGREINCGDSVP*QDPKTS
Trigger: AGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCC...GCAGTTTATTTCTCTCCCAGTTAAAAGAATTCCGACAATAGACAGCCCCAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CCA 90 bp CTGGCCATTTTTCTACTCTCTAGCCCTACACAGAACATGTCAACTCATCTCAGAGTTGCCATTCCTGCCTaGGGCTGTCTATTGTCGGAA +
Preference number: 4 (lower is better)
Translates to: LAIFLLSSPTQNMSTHLRVAIPA*GCLLSE
Trigger: TTCCGACAATAGACAGCCCCAGGCAGGAATGGCAAC...TCTGAGATGAGTTGACATGTTCTGTGTAGGGCTAGAGAGTAGAAAAATGGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR TCA 90 bp TCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATGCTCTTTGCTTAAAACATTTCTGCCCAGAGGCTaGCTGATAGTGCCCATCACT +
Preference number: 4 (lower is better)
Translates to: SHGKIPRLLPIPCSLLKTFLPRG*LIVPIT
Trigger: AGTGATGGGCACTATCAGTCAGCCTCTGGGCAGAAA...TGTTTTAAGCAAAGAGCATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
CDS-3UTR TCA 90 bp CCACTCTTCAAGAGCCATTGCTGTAAAAGAAACTTTTGCACTTACATATCAGGACTGTTCACCCCAGGCTaGAGCGTACTCAGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: PLFKSHCCKRNFCTYISGLFTPG*SVLSGL
Trigger: CAAGCCACTGAGTACGCTTCAGCCTGGGGTGAACAG...TCCTGATATGTAAGTGCAAAAGTTTCTTTTACAGCAATGGCTCTTGAAGAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR TCA 90 bp GACTCTAAAGAAACTGAGGATTTATCTAACTCTCTCTGGTCCTTCAGCCTAGTACTACAGAGTCTCCAATaGGCACTCCCCAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: DSKETEDLSNSLWSFSLVLQSLQ*ALPSSA
Trigger: TGCAGAGCTGGGGAGTGCTCATTGGAGACTCTGTAG...TACTAGGCTGAAGGACCAGAGAGAGTTAGATAAATCCTCAGTTTCTTTAGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR TCA 90 bp AGGGGGCTTGAGAATTTGCATTTCAAAGAAGTTCCAAGGGATGCTGATGCTGCTACCACCCCTAGGGAATaGCAGAATGGGAAAATGGAA +
Preference number: 4 (lower is better)
Translates to: RGLENLHFKEVPRDADAATTPRE*QNGKME
Trigger: TTCCATTTTCCCATTCTGTCATTCCCTAGGGGTGGT...AGCAGCATCAGCATCCCTTGGAACTTCTTTGAAATGCAAATTCTCAAGCCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR GCA 90 bp ACAGGAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTAGTTCCTGCAATTTCTaGAAGATCGGCTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: TGTLGTLSHGKIPRLLPISSCNF*KIGLTS
Trigger: AGAAGTCAAGCCGATCTTGCAGAAATTGCAGGAACT...AATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
CDS-3UTR GCA 90 bp ACAGGAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCTCTCTTCATATTTATaGAACGTCGCCCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: TGTLGTLSHGKIPRLLPILSSYL*NVALFR
Trigger: TCTGAACAGGGCGACGTTGCATAAATATGAAGAGAG...AATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
CDS-3UTR GCA 90 bp CTGGCCATTTTTCTACTCTCTAGCCCTACACAGAACATGTCAACTCATCTCAGAAATTCCAGAAGTTGTTaGTCTCGTTGCCGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: LAIFLLSSPTQNMSTHLRNSRSC*SRCRGS
Trigger: AGAGCCCCGGCAACGAGAGCAACAACTTCTGGAATT...TCTGAGATGAGTTGACATGTTCTGTGTAGGGCTAGAGAGTAGAAAAATGGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CCA 90 bp ACAAATGAGATCATGGAGAGGTATGCAAGGGCTTCCAAGTTATCAATGATGTTCCTGAAGCGTACTCAGTaGCTTGAGCTCCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: TNEIMERYARASKLSMMFLKRTQ*LELQGH
Trigger: GTGACCCTGGAGCTCAAGCCACTGAGTACGCTTCAG...GAACATCATTGATAACTTGGAAGCCCTTGCATACCTCTCCATGATCTCATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CCA 90 bp AGGGGGCTTGAGAATTTGCATTTCAAAGAAGTTCCAAGGGATGCTGATGCTGCTTCTCTAGCAACTTTGTaGAGTTGCCATTCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RGLENLHFKEVPRDADAASLATL*SCHSCL
Trigger: CAGGCAGGAATGGCAACTCCACAAAGTTGCTAGAGA...AGCAGCATCAGCATCCCTTGGAACTTCTTTGAAATGCAAATTCTCAAGCCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CCA 90 bp ACAAATGAGATCATGGAGAGGTATGCAAGGGCTTCCAAGTTATCAATGATGTTCCGCACTGCTTCTCTGTaGCTACCACCTACTGGCCAT +
Preference number: 4 (lower is better)
Translates to: TNEIMERYARASKLSMMFRTASL*LPPTGH
Trigger: ATGGCCAGTAGGTGGTAGCCACAGAGAAGCAGTGCG...GAACATCATTGATAACTTGGAAGCCCTTGCATACCTCTCCATGATCTCATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR CAA 72 bp AATGGGAAAATGGAAGAAAGCTGGTCTCTAGCAACTTaGTGGAGTTGCCATTCCTGCCTGGGGCTGTCTATT +
Preference number: 4 (lower is better)
Translates to: NGKMEESWSLAT*WSCHSCLGLSI
Trigger: AATAGACAGCCCCAGGCAGGAATGGCAACTCCACAAAGTTGCTAGAGACCAGCTTTCTTCCATTTTCCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR TCA 90 bp TGCCTGGGGCTGTCTATTGTCGGAATTCTTTTAACTGGGAGAGAAATAAACTGCTCTGCAAGATCGGCTTaGCTTCTTCCTCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: CLGLSIVGILLTGREINCSARSA*LLPLHQ
Trigger: CTGATGAAGAGGAAGAAGTCAAGCCGATCTTGCAGA...GCAGTTTATTTCTCTCCCAGTTAAAAGAATTCCGACAATAGACAGCCCCAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR TCA 90 bp TGCCTGGGGCTGTCTATTGTCGGAATTCTTTTAACTGGGAGAGAAATAAACTGCTCATGGACATCCATCTaGACAGCCAACTTAGCCTGT +
Preference number: 4 (lower is better)
Translates to: CLGLSIVGILLTGREINCSWTSI*TANLAC
Trigger: ACAGGCTAAGTTGGCTGTTCAGATGGATGTCCATGA...GCAGTTTATTTCTCTCCCAGTTAAAAGAATTCCGACAATAGACAGCCCCAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR GCA 90 bp CTACTGCCTCAAATGTTTACACATACTACTACCCCCATCTTCCCTAGTTGCTTTGCAAGCTTCCCAGCATaGTCTGCAGCTTTTTGGTCT +
Preference number: 4 (lower is better)
Translates to: LLPQMFTHTTTPIFPSCFASFPA*SAAFWS
Trigger: AGACCAAAAAGCTGCAGAGCATGCTGGGAAGCTTGC...AAAGCAACTAGGGAAGATGGGGGTAGTAGTATGTGTAAACATTTGAGGCAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR GCA 90 bp CCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATGCTCAATTCCATGCTCTTTaGTTAAAACATAGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: PWGLCPMARSQDFYQFHAQFHAL*LKHREQ
Trigger: CTGCTCTCTATGTTTTAAGCAAAGAGCATGGAATTG...AGCATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
CDS-3UTR CCA 90 bp ACAAATTTTGCATACTTACTTGTTTGTACGCACTGCTTCTCTGTGGCTACCACCACTTTGTTCCTGCAATaGGTGAGGGCTCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: TNFAYLLVCTHCFSVATTTLFLQ*VRAPEK
Trigger: CTTCTCAGGAGCCCTCACCCATTGCAGGAACAAAGT...GGTGGTAGCCACAGAGAAGCAGTGCGTACAAACAAGTAAGTATGCAAAATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CCA 90 bp AATGGAAGAAAGCTGGTCTCTAGCAACTTTGTGGAGTTGCCATTCCTGCCTGGGAAAATGGAAGAAAGCTaGTCTCTAGCAACTTTGTGG +
Preference number: 4 (lower is better)
Translates to: NGRKLVSSNFVELPFLPGKMEES*SLATLW
Trigger: CCACAAAGTTGCTAGAGACCAGCTTTCTTCCATTTT...CCCAGGCAGGAATGGCAACTCCACAAAGTTGCTAGAGACCAGCTTTCTTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CCA 90 bp ACAGGAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCAGGCCAATTCAATTaGTTATTAATCCTCACTCAC +
Preference number: 4 (lower is better)
Translates to: TGTLGTLSHGKIPRLLPIPGQFN*LLILTH
Trigger: GTGAGTGAGGATTAATAACCAATTGAATTGGCCTGG...AATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CCA 90 bp GACTCTAAAGAAACTGAGGATTTATCTAACTCTCTCTGGTCCTTCAGCCTAGTACTTGGACTCCCAAAGTaGTGGGATTACAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: DSKETEDLSNSLWSFSLVLGLPK*WDYRLS
Trigger: GCTCAGCCTGTAATCCCACCACTTTGGGAGTCCAAG...TACTAGGCTGAAGGACCAGAGAGAGTTAGATAAATCCTCAGTTTCTTTAGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR TCA 90 bp CTGGCCATTTTTCTACTCTCTAGCCCTACACAGAACATGTCAACTCATCTCAGAATAGCAAGGTCCATCTaGATCTACCAGGCCAAATGT +
Preference number: 4 (lower is better)
Translates to: LAIFLLSSPTQNMSTHLRIARSI*IYQAKC
Trigger: ACATTTGGCCTGGTAGATTCAGATGGACCTTGCTAT...TCTGAGATGAGTTGACATGTTCTGTGTAGGGCTAGAGAGTAGAAAAATGGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR TCA 90 bp CAGGCCAAATGTAAAGGGGACTTTCTCCTCTGTGGTGAGGCTAAATACCACCTTACTGATATATACATATaGGGCTTAGGAAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: QAKCKGDFLLCGEAKYHLTDIYI*GLGRRQ
Trigger: TTGCCTCCTTCCTAAGCCTCATATGTATATATCAGT...AAGGTGGTATTTAGCCTCACCACAGAGGAGAAAGTCCCCTTTACATTTGGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
CDS-3UTR TCA 90 bp AATGGAAGAAAGCTGGTCTCTAGCAACTTTGTGGAGTTGCCATTCCTGCCTGGGACTCATCTCAGAATTTaGGTAAAAGGGGAACAGTAT +
Preference number: 4 (lower is better)
Translates to: NGRKLVSSNFVELPFLPGTHLRI*VKGEQY
Trigger: ATACTGTTCCCCTTTTACTCAAATTCTGAGATGAGT...CCCAGGCAGGAATGGCAACTCCACAAAGTTGCTAGAGACCAGCTTTCTTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR GCA 90 bp ACAAATTTTGCATACTTACTTGTTTGTACGCACTGCTTCTCTGTGGCTACCACCTTAGAACTTGTGCCTTaGCCTGGACAGAACCCACTA +
Preference number: 4 (lower is better)
Translates to: TNFAYLLVCTHCFSVATTLELVP*PGQNPL
Trigger: TAGTGGGTTCTGTCCAGGGCAAGGCACAAGTTCTAA...GGTGGTAGCCACAGAGAAGCAGTGCGTACAAACAAGTAAGTATGCAAAATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR GCA 90 bp TCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATGCTCTTTGCTTAAAACAAGCACTCCCCAGCTCTaGACTATATTGTACACCATC +
Preference number: 4 (lower is better)
Translates to: SHGKIPRLLPIPCSLLKTSTPQL*TILYTI
Trigger: GATGGTGTACAATATAGTGCAGAGCTGGGGAGTGCT...TGTTTTAAGCAAAGAGCATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
CDS-3UTR GCA 90 bp GACTCTAAAGAAACTGAGGATTTATCTAACTCTCTCTGGTCCTTCAGCCTAGTAGAGACAGGAGAGATATaGCAGAAGAGTATGTGGCCC +
Preference number: 4 (lower is better)
Translates to: DSKETEDLSNSLWSFSLVETGEI*QKSMWP
Trigger: GGGCCACATACTCTTCTGGCATATCTCTCCTGTCTC...TACTAGGCTGAAGGACCAGAGAGAGTTAGATAAATCCTCAGTTTCTTTAGAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CCA 90 bp ACAAATGAGATCATGGAGAGGTATGCAAGGGCTTCCAAGTTATCAATGATGTTCTGCATCAGAGTCACCTaGAGGGTTTGCGAAACACAG +
Preference number: 4 (lower is better)
Translates to: TNEIMERYARASKLSMMFCIRVT*RVCETQ
Trigger: CTGTGTTTCGCAAACCCTCCAGGTGACTCTGATGCA...GAACATCATTGATAACTTGGAAGCCCTTGCATACCTCTCCATGATCTCATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR TCA 90 bp TCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATGCTCTTTGCTTAAAACAAGCTGTGAAGACAAATaGGATCATGGAGAGGTATGC +
Preference number: 4 (lower is better)
Translates to: SHGKIPRLLPIPCSLLKTSCEDK*DHGEVC
Trigger: GCATACCTCTCCATGATCTCATTTGTCTTCACAGCT...TGTTTTAAGCAAAGAGCATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR GCA 90 bp TGCCTGGGGCTGTCTATTGTCGGAATTCTTTTAACTGGGAGAGAAATAAACTGCACCATTGACAGGTTTTaGAAGGAGACTTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: CLGLSIVGILLTGREINCTIDRF*KETLFL
Trigger: CAGGAACAAAGTCTCCTTGCAAAACCTGTCAATGGT...GCAGTTTATTTCTCTCCCAGTTAAAAGAATTCCGACAATAGACAGCCCCAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR GCA 90 bp AGGGGGCTTGAGAATTTGCATTTCAAAGAAGTTCCAAGGGATGCTGATGCTGCTGTCCCACATCTCTACTaGCTCAAATGTTTACACATA +
Preference number: 4 (lower is better)
Translates to: RGLENLHFKEVPRDADAAVPHLY*LKCLHI
Trigger: TATGTGTAAACATTTGAGGCAGTAGAGATGTGGGAC...AGCAGCATCAGCATCCCTTGGAACTTCTTTGAAATGCAAATTCTCAAGCCCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR GCA 90 bp CCACTCTTCAAGAGCCATTGCTGTAAAAGAAACTTTTGCACTTACATATCAGGACTTGTTTGTACGCACTaGTTCTCTGTGGCTACCACC +
Preference number: 4 (lower is better)
Translates to: PLFKSHCCKRNFCTYISGLVCTH*FSVATT
Trigger: GGTGGTAGCCACAGAGAAGCAGTGCGTACAAACAAG...TCCTGATATGTAAGTGCAAAAGTTTCTTTTACAGCAATGGCTCTTGAAGAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CCA 90 bp TCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATGCTCTTTGCTTAAAACAGTGGCTACCACCTACTaGCCATTTTTCTACTCTCTA +
Preference number: 4 (lower is better)
Translates to: SHGKIPRLLPIPCSLLKTVATTY*PFFYSL
Trigger: TAGAGAGTAGAAAAATGGCCAGTAGGTGGTAGCCAC...TGTTTTAAGCAAAGAGCATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258821.8
3UTR CAA 72 bp TTGAATTCAGTAAGTCTGGGTAGGGGGCTTGAGAATTaGCATTTCAAAGAAGTTCCAAGGGATGCTGATGCT +
Preference number: 4 (lower is better)
Translates to: LNSVSLGRGLEN*HFKEVPRDADA
Trigger: AGCATCAGCATCCCTTGGAACTTCTTTGAAATGCAAATTCTCAAGCCCCCTACCCAGACTTACTGAATTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR TCA 90 bp CCACTCTTCAAGAGCCATTGCTGTAAAAGAAACTTTTGCACTTACATATCAGGAGTCGGACACTGTCCATaGCATGGTGAGAATGTTCAT +
Preference number: 4 (lower is better)
Translates to: PLFKSHCCKRNFCTYISGVGHCP*HGENVH
Trigger: ATGAACATTCTCACCATGTCATGGACAGTGTCCGAC...TCCTGATATGTAAGTGCAAAAGTTTCTTTTACAGCAATGGCTCTTGAAGAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR TCA 90 bp GACTCTAAAGAAACTGAGGATTTATCTAACTCTCTCTGGTCCTTCAGCCTAGTAGCACTGATCAAAAACTaGACAGGACTGGACCAAGAA +
Preference number: 4 (lower is better)
Translates to: DSKETEDLSNSLWSFSLVALIKN*TGLDQE
Trigger: TTCTTGGTCCAGTCCTGTTCAGTTTTTGATCAGTGC...TACTAGGCTGAAGGACCAGAGAGAGTTAGATAAATCCTCAGTTTCTTTAGAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR GCA 90 bp GACTCTAAAGAAACTGAGGATTTATCTAACTCTCTCTGGTCCTTCAGCCTAGTACTCTCTTCATATTTATaGAACGTCGCCCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: DSKETEDLSNSLWSFSLVLSSYL*NVALFR
Trigger: TCTGAACAGGGCGACGTTGCATAAATATGAAGAGAG...TACTAGGCTGAAGGACCAGAGAGAGTTAGATAAATCCTCAGTTTCTTTAGAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR GCA 90 bp CTGGCCATTTTTCTACTCTCTAGCCCTACACAGAACATGTCAACTCATCTCAGACTCTTCAAGAGCCATTaGTGTAAAAGAAACTTTTGC +
Preference number: 4 (lower is better)
Translates to: LAIFLLSSPTQNMSTHLRLFKSH*CKRNFC
Trigger: GCAAAAGTTTCTTTTACAGCAATGGCTCTTGAAGAG...TCTGAGATGAGTTGACATGTTCTGTGTAGGGCTAGAGAGTAGAAAAATGGCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR GCA 90 bp GACTCTAAAGAAACTGAGGATTTATCTAACTCTCTCTGGTCCTTCAGCCTAGTATCTCAAATTTTACTGTaGATCAGAGTCACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: DSKETEDLSNSLWSFSLVSQILL*IRVTWR
Trigger: CCTCCAGGTGACTCTGATGCACAGTAAAATTTGAGA...TACTAGGCTGAAGGACCAGAGAGAGTTAGATAAATCCTCAGTTTCTTTAGAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CCA 90 bp GACTCTAAAGAAACTGAGGATTTATCTAACTCTCTCTGGTCCTTCAGCCTAGTAAGACAAATGAGATCATaGAGAGGTATGCAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: DSKETEDLSNSLWSFSLVRQMRS*RGMQGL
Trigger: AAGCCCTTGCATACCTCTCCATGATCTCATTTGTCT...TACTAGGCTGAAGGACCAGAGAGAGTTAGATAAATCCTCAGTTTCTTTAGAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR GCA 90 bp CCACTCTTCAAGAGCCATTGCTGTAAAAGAAACTTTTGCACTTACATATCAGGAAGTTCCTGCAATTTCTaGAAGATCGGCTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: PLFKSHCCKRNFCTYISGSSCNF*KIGLTS
Trigger: AGAAGTCAAGCCGATCTTGCAGAAATTGCAGGAACT...TCCTGATATGTAAGTGCAAAAGTTTCTTTTACAGCAATGGCTCTTGAAGAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CCA 90 bp CCACTCTTCAAGAGCCATTGCTGTAAAAGAAACTTTTGCACTTACATATCAGGATCTCCACTCGAACACTaGAAAAGGAATAGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: PLFKSHCCKRNFCTYISGSPLEH*KRNSPF
Trigger: GAAAGGACTATTCCTTTTCCAGTGTTCGAGTGGAGA...TCCTGATATGTAAGTGCAAAAGTTTCTTTTACAGCAATGGCTCTTGAAGAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CCA 90 bp GACTCTAAAGAAACTGAGGATTTATCTAACTCTCTCTGGTCCTTCAGCCTAGTAAAAACTGAACAGGACTaGACCAAGAACAAAGATCTG +
Preference number: 4 (lower is better)
Translates to: DSKETEDLSNSLWSFSLVKTEQD*TKNKDL
Trigger: CAGATCTTTGTTCTTGGTCCAGTCCTGTTCAGTTTT...TACTAGGCTGAAGGACCAGAGAGAGTTAGATAAATCCTCAGTTTCTTTAGAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CCA 90 bp TCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATGCTCTTTGCTTAAAACACGGAATTCTTTTAACTaGGAGAGAAATAAACTGCTT +
Preference number: 4 (lower is better)
Translates to: SHGKIPRLLPIPCSLLKTRNSFN*ERNKLL
Trigger: AAGCAGTTTATTTCTCTCCCAGTTAAAAGAATTCCG...TGTTTTAAGCAAAGAGCATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS GCA 90 bp GTCGGCAGCAGGAGGTTCCAACGAGGCTCCCTGGCTGGCTGCGGCTaGACCCTCGAGGGTTGTTATAGTAACCACACAGACGCACGCAGC +
Preference number: 5 (lower is better)
Translates to: VGSRRFQRGSLAGCG*TLEGCYSNHTDARS
Trigger: GCTGCGTGCGTCTGTGTGGTTACTATAACAACCCTCGAGGGTGCAGCCGCAGCCAGCCAGGGAGCCTCGTTGGAACCTCCTGCTGCCGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553828.1
CDS CCA 90 bp TTAACCGCAGTCAGGTCGGCAGCAGGAGGTTCCAACGAGGCTCCCTaGCTGGCTGCGGCTGCACCCTCGAGGGTTGTTATAGTAACCACA +
Preference number: 5 (lower is better)
Translates to: LTAVRSAAGGSNEAP*LAAAAPSRVVIVTT
Trigger: TGTGGTTACTATAACAACCCTCGAGGGTGCAGCCGCAGCCAGCCAGGGAGCCTCGTTGGAACCTCCTGCTGCCGACCTGACTGCGGTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553828.1
CDS-3UTR CAA 90 bp TCCCAGGATGACGGCACCGCTGTTCACCCCAGGCTGAAGCGTACTCAGTGGCTTCAGGAATTCCAGAAGTaGTTGCTCTCGTTGCCGGGG +
Preference number: 5 (lower is better)
Translates to: SQDDGTAVHPRLKRTQWLQEFQK*LLSLPG
Trigger: CCCCGGCAACGAGAGCAACAACTTCTGGAATTCCTG...AAGCCACTGAGTACGCTTCAGCCTGGGGTGAACAGCGGTGCCGTCATCCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
CDS-3UTR CAA 90 bp TCCCAGGATGACGGCACCGCTGTTCACCCCAGGCTGAAGCGTACTCAGTGGCTTAGCGTACTCAGTGGCTaGAGCTCCAGGGTCACTTTC +
Preference number: 5 (lower is better)
Translates to: SQDDGTAVHPRLKRTQWLSVLSG*SSRVTF
Trigger: GAAAGTGACCCTGGAGCTCAAGCCACTGAGTACGCT...AAGCCACTGAGTACGCTTCAGCCTGGGGTGAACAGCGGTGCCGTCATCCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
CDS CCA 90 bp ATCCTTCCCATCTCTGCTTTCCAAAGGGATAGGGGGCAGCTCACATaGGTGAGGGCTCCTGAGAAGCAGGTGTGGGCAGCTGCAACATCC +
Preference number: 5 (lower is better)
Translates to: ILPISAFQRDRGQLT*VRAPEKQVWAAATS
Trigger: GGATGTTGCAGCTGCCCACACCTGCTTCTCAGGAGCCCTCACCCATGTGAGCTGCCCCCTATCCCTTTGGAAAGCAGAGATGGGAAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557379.1
CDS-3UTR CAA 90 bp CCACTGTGGCAACAGCCTGGCTGCTGGATCCCTGAGGCTTCCCATTCACCACTACTCCTCCACTCCCTGTaGAGCATGCAAGTCAAAGGT +
Preference number: 5 (lower is better)
Translates to: PLWQQPGCWIPEASHSPLLLHSL*SMQVKG
Trigger: ACCTTTGACTTGCATGCTCAACAGGGAGTGGAGGAG...TAGTGGTGAATGGGAAGCCTCAGGGATCCAGCAGCCAGGCTGTTGCCACAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383029.7
CDS GCA 90 bp AGGGTTGTTATAGTAACCACACAGACGCACGCAGCTTCGCGTGTGTaGCGAGGAATTCACGGGCAGTACATAAACTGGACTCCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: RVVIVTTQTHAASRV*RGIHGQYINWTPCF
Trigger: GAAGCAGGGAGTCCAGTTTATGTACTGCCCGTGAATTCCTCGGCACACACGCGAAGCTGCGTGCGTCTGTGTGGTTACTATAACAACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553828.1
CDS-3UTR CAA 90 bp CCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATGCTGTCAACTTTCTCTGCTaGGGCATAGGCACTGAGGGC +
Preference number: 5 (lower is better)
Translates to: PWGLCPMARSQDFYQFHAVNFLC*GIGTEG
Trigger: GCCCTCAGTGCCTATGCCCAAGCAGAGAAAGTTGAC...AGCATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
CDS-3UTR CAA 90 bp CTGAATCACTGGATGTGGCTGGACCGGCTGTCCAGAGCCTTGTCTCCTCTCCTCTCCTCCCACATAGTTTaGAATTCAGTAAGTCTGGGT +
Preference number: 5 (lower is better)
Translates to: LNHWMWLDRLSRALSPLLSSHIV*NSVSLG
Trigger: ACCCAGACTTACTGAATTCAAAACTATGTGGGAGGA...GAGGAGAGGAGACAAGGCTCTGGACAGCCGGTCCAGCCACATCCAGTGATTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CAA 90 bp GAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATCGGAGTTTCACCATCTaGGCCAGGCTGATCTTGAAC +
Preference number: 5 (lower is better)
Translates to: EPWGLCPMARSQDFYQFHRSFTI*ARLILN
Trigger: GTTCAAGATCAGCCTGGCCAAGATGGTGAAACTCCG...ATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CAA 90 bp CCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATGCTTTTGCGAAACACAGATaGCTGGGCTCCTCCCACATA +
Preference number: 5 (lower is better)
Translates to: PWGLCPMARSQDFYQFHAFAKHR*LGSSHI
Trigger: TATGTGGGAGGAGCCCAGCAATCTGTGTTTCGCAAA...AGCATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CAA 90 bp CCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATGCTGCCATTCAGTTGTTGTaGCTGTTTGAGACGGAGTCT +
Preference number: 5 (lower is better)
Translates to: PWGLCPMARSQDFYQFHAAIQLL*LFETES
Trigger: AGACTCCGTCTCAAACAGCAACAACAACTGAATGGC...AGCATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CAA 90 bp CAGGAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCTTTTGCAAGGAGACTTaGTTCCTGCACCAGCTGGTT +
Preference number: 5 (lower is better)
Translates to: QEPWGLCPMARSQDFYQFFCKET*FLHQLV
Trigger: AACCAGCTGGTGCAGGAACAAAGTCTCCTTGCAAAA...GAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383029.7
CDS GCA 90 bp GCTGATCCACGAGTTCCTGTGGACTATGTGGAGTCTGGACCCCTCTaGATCAGACCCCAAAGTGGAATTACACAGGTTGAAAGAAATCAA +
Preference number: 5 (lower is better)
Translates to: ADPRVPVDYVESGPL*IRPQSGITQVERNQ
Trigger: TTGATTTCTTTCAACCTGTGTAATTCCACTTTGGGGTCTGATGCAGAGGGGTCCAGACTCCACATAGTCCACAGGAACTCGTGGATCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553828.1
CDS-3UTR CAA 90 bp AGCATGCAAGTCAAAGGTCATTCACACTGTGGTCGCGATGCCACTGTGGCAACAATGCTCTGCAGCTTTTaGGTCTTCACCTTTCCCTTA +
Preference number: 5 (lower is better)
Translates to: SMQVKGHSHCGRDATVATMLCSF*VFTFPL
Trigger: TAAGGGAAAGGTGAAGACCAAAAAGCTGCAGAGCAT...TGTTGCCACAGTGGCATCGCGACCACAGTGTGAATGACCTTTGACTTGCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
CDS TCA 90 bp TGCCCACGGGATAGTCACAGAAGGAAATCAGAAGTCACAAATCTGTaGCCACTGACAATCTCCTCAACTGCCAGGGAAAGAACAGGAAGT +
Preference number: 5 (lower is better)
Translates to: CPRDSHRRKSEVTNL*PLTISSTARERTGS
Trigger: ACTTCCTGTTCTTTCCCTGGCAGTTGAGGAGATTGTCAGTGGTCACAGATTTGTGACTTCTGATTTCCTTCTGTGACTATCCCGTGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554157.5
CDS CCA 90 bp GCAGCTTCGCGTGTGTGCCGAGGAATTCACGGGCAGTACATAAACTaGACTCCCTGCTTCATTCGGAGTAACAAAAACACATACAGAATT +
Preference number: 5 (lower is better)
Translates to: AASRVCRGIHGQYIN*TPCFIRSNKNTYRI
Trigger: AATTCTGTATGTGTTTTTGTTACTCCGAATGAAGCAGGGAGTCCAGTTTATGTACTGCCCGTGAATTCCTCGGCACACACGCGAAGCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553828.1
CDS-3UTR CAA 90 bp TCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATGCTCTTTGCTTAAAACAGAATTCCAGAAGTTGTaGCTCTCGTTGCCGGGGCTC +
Preference number: 5 (lower is better)
Translates to: SHGKIPRLLPIPCSLLKTEFQKL*LSLPGL
Trigger: GAGCCCCGGCAACGAGAGCAACAACTTCTGGAATTC...TGTTTTAAGCAAAGAGCATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
CDS-3UTR CAA 90 bp CTACTGCCTCAAATGTTTACACATACTACTACCCCCATCTTCCCTAGTTGCTTTCAGGAATTCCAGAAGTaGTTGCTCTCGTTGCCGGGG +
Preference number: 5 (lower is better)
Translates to: LLPQMFTHTTTPIFPSCFQEFQK*LLSLPG
Trigger: CCCCGGCAACGAGAGCAACAACTTCTGGAATTCCTG...AAAGCAACTAGGGAAGATGGGGGTAGTAGTATGTGTAAACATTTGAGGCAGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CAA 90 bp ACAGGAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTATGCTCTGCAGCTTTTaGGTCTTCACCTTTCCCTTA +
Preference number: 5 (lower is better)
Translates to: TGTLGTLSHGKIPRLLPIMLCSF*VFTFPL
Trigger: TAAGGGAAAGGTGAAGACCAAAAAGCTGCAGAGCAT...AATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
CDS TCA 90 bp GGGATAGTCACAGAAGGAAATCAGAAGTCACAAATCTGTGACCACTaGCAATCTCCTCAACTGCCAGGGAAAGAACAGGAAGTGAGAGCA +
Preference number: 5 (lower is better)
Translates to: GIVTEGNQKSQICDH*QSPQLPGKEQEVRA
Trigger: TGCTCTCACTTCCTGTTCTTTCCCTGGCAGTTGAGGAGATTGTCAGTGGTCACAGATTTGTGACTTCTGATTTCCTTCTGTGACTATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554157.5
CDS-3UTR CAA 90 bp GACTCTAAAGAAACTGAGGATTTATCTAACTCTCTCTGGTCCTTCAGCCTAGTAAGCGTACTCAGTGGCTaGAGCTCCAGGGTCACTTTC +
Preference number: 5 (lower is better)
Translates to: DSKETEDLSNSLWSFSLVSVLSG*SSRVTF
Trigger: GAAAGTGACCCTGGAGCTCAAGCCACTGAGTACGCT...TACTAGGCTGAAGGACCAGAGAGAGTTAGATAAATCCTCAGTTTCTTTAGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CAA 90 bp ACAGGAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTATTACAGCCATTCAGTaGTTGTTGCTGTTTGAGACG +
Preference number: 5 (lower is better)
Translates to: TGTLGTLSHGKIPRLLPIITAIQ*LLLFET
Trigger: CGTCTCAAACAGCAACAACAACTGAATGGCTGTAAT...AATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CAA 90 bp GAACCTTGGGGACTCTGTCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATAGGGGGCTTGAGAATTaGCATTTCAAAGAAGTTCCA +
Preference number: 5 (lower is better)
Translates to: EPWGLCPMARSQDFYQFHRGLEN*HFKEVP
Trigger: TGGAACTTCTTTGAAATGCAAATTCTCAAGCCCCCT...ATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGACAGAGTCCCCAAGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CAA 90 bp CTACTGCCTCAAATGTTTACACATACTACTACCCCCATCTTCCCTAGTTGCTTTGCTGACGAAGCACCATaGACAGGTTTTGCAAGGAGA +
Preference number: 5 (lower is better)
Translates to: LLPQMFTHTTTPIFPSCFADEAP*TGFARR
Trigger: TCTCCTTGCAAAACCTGTCAATGGTGCTTCGTCAGC...AAAGCAACTAGGGAAGATGGGGGTAGTAGTATGTGTAAACATTTGAGGCAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CAA 90 bp TCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATGCTCTTTGCTTAAAACAGCTGACGAAGCACCATaGACAGGTTTTGCAAGGAGA +
Preference number: 5 (lower is better)
Translates to: SHGKIPRLLPIPCSLLKTADEAP*TGFARR
Trigger: TCTCCTTGCAAAACCTGTCAATGGTGCTTCGTCAGC...TGTTTTAAGCAAAGAGCATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000383029.7
CDS-3UTR CAA 90 bp AAAGAAACTGAGGATTTATCTAACTCTCTCTGGTCCTTCAGCCTAGTAACACTAGTCAACTTTCTCTGCTaGGGCATAGGCACTGAGGGC +
Preference number: 5 (lower is better)
Translates to: KETEDLSNSLWSFSLVTLVNFLC*GIGTEG
Trigger: GCCCTCAGTGCCTATGCCCAAGCAGAGAAAGTTGAC...TAGTGTTACTAGGCTGAAGGACCAGAGAGAGTTAGATAAATCCTCAGTTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CAA 90 bp ACAAATGAGATCATGGAGAGGTATGCAAGGGCTTCCAAGTTATCAATGATGTTCCTCCTCCACTCCCTGTaGAGCATGCAAGTCAAAGGT +
Preference number: 5 (lower is better)
Translates to: TNEIMERYARASKLSMMFLLHSL*SMQVKG
Trigger: ACCTTTGACTTGCATGCTCAACAGGGAGTGGAGGAG...GAACATCATTGATAACTTGGAAGCCCTTGCATACCTCTCCATGATCTCATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS CCA 90 bp AGATTTCCATCTAAGAAACATTTCTCTGGCAGCACTGTGGAACACTaGAGGAAACCAGAGAATCAGGGAGACCTATCTGGAGAAGTGATA +
Preference number: 5 (lower is better)
Translates to: RFPSKKHFSGSTVEH*RKPENQGDLSGEVI
Trigger: TATCACTTCTCCAGATAGGTCTCCCTGATTCTCTGGTTTCCTCCAGTGTTCCACAGTGCTGCCAGAGAAATGTTTCTTAGATGGAAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554157.5
CDS-3UTR CAA 90 bp ACAAATTTTGCATACTTACTTGTTTGTACGCACTGCTTCTCTGTGGCTACCACCTTTTGCAAGGAGACTTaGTTCCTGCAATGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: TNFAYLLVCTHCFSVATTFCKET*FLQWVR
Trigger: CCTCACCCATTGCAGGAACAAAGTCTCCTTGCAAAA...GGTGGTAGCCACAGAGAAGCAGTGCGTACAAACAAGTAAGTATGCAAAATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CAA 90 bp TCCCATGGCAAGATCCCAAGACTTCTACCAATTCCATGCTCTTTGCTTAAAACAACAGCCATTCAGTTGTaGTTGCTGTTTGAGACGGAG +
Preference number: 5 (lower is better)
Translates to: SHGKIPRLLPIPCSLLKTTAIQL*LLFETE
Trigger: CTCCGTCTCAAACAGCAACAACAACTGAATGGCTGT...TGTTTTAAGCAAAGAGCATGGAATTGGTAGAAGTCTTGGGATCTTGCCATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS TCA 90 bp GGAGAAGCCTATTCTTCCAAAAGTCTTAATCAAGTGACTGAGAGGTaGTACCATTCATTCACAAGGAATCCAGGGAGGAGAAGCAGGTTT +
Preference number: 5 (lower is better)
Translates to: GEAYSSKSLNQVTER*YHSFTRNPGRRSRF
Trigger: AAACCTGCTTCTCCTCCCTGGATTCCTTGTGAATGAATGGTATCACCTCTCAGTCACTTGATTAAGACTTTTGGAAGAATAGGCTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554157.5
CDS GCA 90 bp TATAGACAGGATGGAGAAGAATCACACTCATGCCATCACGTGACATaGCTGAATTCACAGGAAATATTGCAATCAAGCAAAGCACTCTCC +
Preference number: 5 (lower is better)
Translates to: YRQDGEESHSCHHVT*LNSQEILQSSKALS
Trigger: GGAGAGTGCTTTGCTTGATTGCAATATTTCCTGTGAATTCAGGCATGTCACGTGATGGCATGAGTGTGATTCTTCTCCATCCTGTCTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554157.5
CDS-3UTR CAA 90 bp GACTCTAAAGAAACTGAGGATTTATCTAACTCTCTCTGGTCCTTCAGCCTAGTAGTCTGGGTAGGGGGCTaGAGAATTTGCATTTCAAAG +
Preference number: 5 (lower is better)
Translates to: DSKETEDLSNSLWSFSLVVWVGG*RICISK
Trigger: CTTTGAAATGCAAATTCTCAAGCCCCCTACCCAGAC...TACTAGGCTGAAGGACCAGAGAGAGTTAGATAAATCCTCAGTTTCTTTAGAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS TCA 90 bp GACAGAAACTTTCACAGACTCGGATGGAGAGACATGACATCTAAATaGAATGTTGTACACTGGATCAGATCCTTCTACCACTTGCTACCA +
Preference number: 5 (lower is better)
Translates to: DRNFHRLGWRDMTSK*NVVHWIRSFYHLLP
Trigger: TGGTAGCAAGTGGTAGAAGGATCTGATCCAGTGTACAACATTTCATTTAGATGTCATGTCTCTCCATCCGAGTCTGTGAAAGTTTCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556592.1
CDS TCA 90 bp GCCTCAGAATCCTTCTACACAGTATGTCAGGCAACCACTGACAAGTaGTCAAAGTTGGCAACTATAGGCCATCCTGATATAAAGAGAAAA +
Preference number: 5 (lower is better)
Translates to: ASESFYTVCQATTDK*SKLATIGHPDIKRK
Trigger: TTTTCTCTTTATATCAGGATGGCCTATAGTTGCCAACTTTGATCACTTGTCAGTGGTTGCCTGACATACTGTGTAGAAGGATTCTGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554157.5
CDS GCA 90 bp AAAGCCTCTGATCAAAAGATGGTTAAACATCACCCAGACAATATCTaGCCACGGGATAGTCACAGAAGGAAATCAGAAGTCACAAATCTG +
Preference number: 5 (lower is better)
Translates to: KASDQKMVKHHPDNI*PRDSHRRKSEVTNL
Trigger: CAGATTTGTGACTTCTGATTTCCTTCTGTGACTATCCCGTGGGCAGATATTGTCTGGGTGATGTTTAACCATCTTTTGATCAGAGGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554157.5
CDS CCA 90 bp TTCAAACCTCAACAAGTGTTTTCCAACCGGACCTTAACTGTGGCCTaGCCAGAAAGTGTTAGTAATAAAGCACTCAAAGTCAAACCTACT +
Preference number: 5 (lower is better)
Translates to: FKPQQVFSNRTLTVA*PESVSNKALKVKPT
Trigger: AGTAGGTTTGACTTTGAGTGCTTTATTACTAACACTTTCTGGCCAGGCCACAGTTAAGGTCCGGTTGGAAAACACTTGTTGAGGTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554992.1
CDS-3UTR CAA 90 bp TGCCTGGGGCTGTCTATTGTCGGAATTCTTTTAACTGGGAGAGAAATAAACTGCACTATTAGAACAGTATaGCTCTGTCATCTTGGACCA +
Preference number: 5 (lower is better)
Translates to: CLGLSIVGILLTGREINCTIRTV*LCHLGP
Trigger: TGGTCCAAGATGACAGAGCAATACTGTTCTAATAGT...GCAGTTTATTTCTCTCCCAGTTAAAAGAATTCCGACAATAGACAGCCCCAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS-3UTR CAA 90 bp CTACTGCCTCAAATGTTTACACATACTACTACCCCCATCTTCCCTAGTTGCTTTTGCATACTTACTTGTTaGTACGCACTGCTTCTCTGT +
Preference number: 5 (lower is better)
Translates to: LLPQMFTHTTTPIFPSCFCILTC*YALLLC
Trigger: ACAGAGAAGCAGTGCGTACAAACAAGTAAGTATGCA...AAAGCAACTAGGGAAGATGGGGGTAGTAGTATGTGTAAACATTTGAGGCAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258821.8
CDS GCA 90 bp AAAGGTACATACTCTGATTCCAATTTTATGACATTCTGGAGGGTTTaGGAAACACAGATTGCTGGGCTCCTCCCACATAGTTTTGAATTC +
Preference number: 5 (lower is better)
Translates to: KGTYSDSNFMTFWRV*ETQIAGLLPHSFEF
Trigger: GAATTCAAAACTATGTGGGAGGAGCCCAGCAATCTGTGTTTCGCAAACCCTCCAGAATGTCATAAAATTGGAATCAGAGTATGTACCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556592.1
CDS GCA 90 bp CAACATGTGACAGTAGTTCATGCAGATCTGCCACACACATGTATATaGTATTCGCTATGGATGAATCGAGAAAACAACGTCCTCTCTAAA +
Preference number: 5 (lower is better)
Translates to: QHVTVVHADLPHTCI*YSLWMNRENNVLSK
Trigger: TTTAGAGAGGACGTTGTTTTCTCGATTCATCCATAGCGAATAGCATATACATGTGTGTGGCAGATCTGCATGAACTACTGTCACATGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553828.1
CDS GCA 90 bp CAGAAAGTGTTAGTAATAAAGCACTCAAAGTCAAACCTACTGCATTaGTTGTCCAAGAACAGACTAAACTGCGTATCAAGAAAATTTCCT +
Preference number: 5 (lower is better)
Translates to: QKVLVIKHSKSNLLH*LSKNRLNCVSRKFP
Trigger: AGGAAATTTTCTTGATACGCAGTTTAGTCTGTTCTTGGACAAGCAATGCAGTAGGTTTGACTTTGAGTGCTTTATTACTAACACTTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554992.1
CDS CCA 72 bp GTCAGGTCGGCAGCAGGAGGTTCCAACGAGGCTCCCTaGCTGGCTGCGGCTGCACCCTCGAGGGTTGTTATA +
Preference number: 6 (lower is better)
Translates to: VRSAAGGSNEAP*LAAAAPSRVVI
Trigger: TATAACAACCCTCGAGGGTGCAGCCGCAGCCAGCCAGGGAGCCTCGTTGGAACCTCCTGCTGCCGACCTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553828.1
CDS TCA 72 bp TCTACGGCCCCACCTGCAATTTCTGCAAGATCGGCTTaGCTTCTTCCTCTTCATCAGCCATCATCTCCCGGC +
Preference number: 6 (lower is better)
Translates to: STAPPAISARSA*LLPLHQPSSPG
Trigger: GCCGGGAGATGATGGCTGATGAAGAGGAAGAAGTCAAGCCGATCTTGCAGAAATTGCAGGTGGGGCCGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553828.1
CDS GCA 72 bp ATAGTAACCACACAGACGCACGCAGCTTCGCGTGTGTaGCGAGGAATTCACGGGCAGTACATAAACTGGACT +
Preference number: 6 (lower is better)
Translates to: IVTTQTHAASRV*RGIHGQYINWT
Trigger: AGTCCAGTTTATGTACTGCCCGTGAATTCCTCGGCACACACGCGAAGCTGCGTGCGTCTGTGTGGTTACTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553828.1
CDS TCA 72 bp GATCCACGAGTTCCTGCAATTTCTGCAAGATCGGCTTaGCTTCTTCCTCTTCATCAGCCATCATCTCCCGGC +
Preference number: 6 (lower is better)
Translates to: DPRVPAISARSA*LLPLHQPSSPG
Trigger: GCCGGGAGATGATGGCTGATGAAGAGGAAGAAGTCAAGCCGATCTTGCAGAAATTGCAGGAACTCGTGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258821.8
ENST00000554157.5
ENST00000557379.1
CDS CAA 72 bp CATCTTCAGTGTCAGTCCGCAGCTGACGAAGCACCATaGACAGGTTTTGCAAGGAGACTTTGTTCCTGCACC +
Preference number: 6 (lower is better)
Translates to: HLQCQSAADEAP*TGFARRLCSCT
Trigger: GGTGCAGGAACAAAGTCTCCTTGCAAAACCTGTCAATGGTGCTTCGTCAGCTGCGGACTGACACTGAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
CDS TCA 72 bp ATCTTCAGTGTCAGTCCGCAGCTGACGAAGCACCATTaGCAGGTTTTGCAAGGAGACTTTGTTCCTGCACCA +
Preference number: 6 (lower is better)
Translates to: IFSVSPQLTKHH*QVLQGDFVPAP
Trigger: TGGTGCAGGAACAAAGTCTCCTTGCAAAACCTGTCAATGGTGCTTCGTCAGCTGCGGACTGACACTGAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383029.7
CDS TCA 72 bp ATCTTCAGTGTCAGTCCGCAGCTGACGAAGCACCATTaGCAGGTTTTGCAAGGAGACTTTGTTCCTGCAATG +
Preference number: 6 (lower is better)
Translates to: IFSVSPQLTKHH*QVLQGDFVPAM
Trigger: CATTGCAGGAACAAAGTCTCCTTGCAAAACCTGTCAATGGTGCTTCGTCAGCTGCGGACTGACACTGAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000554157.5
CDS CAA 72 bp CATCTTCAGTGTCAGTCCGCAGCTGACGAAGCACCATaGACAGGTTTTGCAAGGAGACTTTGTTCCTGCAAT +
Preference number: 6 (lower is better)
Translates to: HLQCQSAADEAP*TGFARRLCSCN
Trigger: ATTGCAGGAACAAAGTCTCCTTGCAAAACCTGTCAATGGTGCTTCGTCAGCTGCGGACTGACACTGAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258821.8
ENST00000554157.5
CDS CCA 72 bp TCTAAGAAACATTTCTCTGGCAGCACTGTGGAACACTaGAGGAAACCAGAGAATCAGGGAGACCTATCTGGA +
Preference number: 6 (lower is better)
Translates to: SKKHFSGSTVEH*RKPENQGDLSG
Trigger: TCCAGATAGGTCTCCCTGATTCTCTGGTTTCCTCCAGTGTTCCACAGTGCTGCCAGAGAAATGTTTCTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554157.5
CDS CCA 72 bp GATTTCCATCTAAGAAACATTTCTCTGGCAGCACTGTaGAACACTGGAGGAAACCAGAGAATCAGGGAGACC +
Preference number: 6 (lower is better)
Translates to: DFHLRNISLAAL*NTGGNQRIRET
Trigger: GGTCTCCCTGATTCTCTGGTTTCCTCCAGTGTTCCACAGTGCTGCCAGAGAAATGTTTCTTAGATGGAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554157.5
CDS TCA 72 bp ACAGAAGGAAATCAGAAGTCACAAATCTGTGACCACTaGCAATCTCCTCAACTGCCAGGGAAAGAACAGGAA +
Preference number: 6 (lower is better)
Translates to: TEGNQKSQICDH*QSPQLPGKEQE
Trigger: TTCCTGTTCTTTCCCTGGCAGTTGAGGAGATTGTCAGTGGTCACAGATTTGTGACTTCTGATTTCCTTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554157.5
CDS TCA 72 bp GATAGTCACAGAAGGAAATCAGAAGTCACAAATCTGTaGCCACTGACAATCTCCTCAACTGCCAGGGAAAGA +
Preference number: 6 (lower is better)
Translates to: DSHRRKSEVTNL*PLTISSTARER
Trigger: TCTTTCCCTGGCAGTTGAGGAGATTGTCAGTGGTCACAGATTTGTGACTTCTGATTTCCTTCTGTGACTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554157.5
CDS GCA 72 bp TACTCTGATTCCAATTTTATGACATTCTGGAGGGTTTaGGAAACACAGATTGCTGGGCTCCTCCCACATAGT +
Preference number: 6 (lower is better)
Translates to: YSDSNFMTFWRV*ETQIAGLLPHS
Trigger: ACTATGTGGGAGGAGCCCAGCAATCTGTGTTTCGCAAACCCTCCAGAATGTCATAAAATTGGAATCAGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556592.1
CDS TCA 72 bp TCCTTCTACACAGTATGTCAGGCAACCACTGACAAGTaGTCAAAGTTGGCAACTATAGGCCATCCTGATATA +
Preference number: 6 (lower is better)
Translates to: SFYTVCQATTDK*SKLATIGHPDI
Trigger: TATATCAGGATGGCCTATAGTTGCCAACTTTGATCACTTGTCAGTGGTTGCCTGACATACTGTGTAGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554157.5
CDS TCA 72 bp AATCAGGGAGACCTATCTGGAGAAGTGATAAGGGGGTaGATTAAGGTGGTAAACACAGAGAAGTCAAGTCTA +
Preference number: 6 (lower is better)
Translates to: NQGDLSGEVIRG*IKVVNTEKSSL
Trigger: TAGACTTGACTTCTCTGTGTTTACCACCTTAATTCACCCCCTTATCACTTCTCCAGATAGGTCTCCCTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554157.5
CDS CCA 72 bp AAAGGTACATACTCTGATTCCAATTTTATGACATTCTaGAGGGTTTGCGAAACACAGATTGCTGGGCTCCTC +
Preference number: 6 (lower is better)
Translates to: KGTYSDSNFMTF*RVCETQIAGLL
Trigger: GAGGAGCCCAGCAATCTGTGTTTCGCAAACCCTCCAGAATGTCATAAAATTGGAATCAGAGTATGTACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556592.1
CDS CAA 72 bp ATGTTAAAAACCTCTGAGGGGATAGGAACAGAGATTTaGACTTGGAGGCAACATCAGGGAACTTCCCAGAAT +
Preference number: 6 (lower is better)
Translates to: MLKTSEGIGTEI*TWRQHQGTSQN
Trigger: ATTCTGGGAAGTTCCCTGATGTTGCCTCCAAGTCAAAATCTCTGTTCCTATCCCCTCAGAGGTTTTTAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554157.5
CDS TCA 72 bp TTTCACAGACTCGGATGGAGAGACATGACATCTAAATaGAATGTTGTACACTGGATCAGATCCTTCTACCAC +
Preference number: 6 (lower is better)
Translates to: FHRLGWRDMTSK*NVVHWIRSFYH
Trigger: GTGGTAGAAGGATCTGATCCAGTGTACAACATTTCATTTAGATGTCATGTCTCTCCATCCGAGTCTGTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556592.1
CDS GCA 72 bp ACAGTAGTTCATGCAGATCTGCCACACACATGTATATaGTATTCGCTATGGATGAATCGAGAAAACAACGTC +
Preference number: 6 (lower is better)
Translates to: TVVHADLPHTCI*YSLWMNRENNV
Trigger: GACGTTGTTTTCTCGATTCATCCATAGCGAATAGCATATACATGTGTGTGGCAGATCTGCATGAACTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553828.1
CDS TCA 72 bp CAACCTGAAAAGGTACATACTCTGATTCCAATTTTATaGCATTCTGGAGGGTTTGCGAAACACAGATTGCTG +
Preference number: 6 (lower is better)
Translates to: QPEKVHTLIPIL*HSGGFAKHRLL
Trigger: CAGCAATCTGTGTTTCGCAAACCCTCCAGAATGTCATAAAATTGGAATCAGAGTATGTACCTTTTCAGGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556592.1
CDS TCA 72 bp TATTCTTCCAAAAGTCTTAATCAAGTGACTGAGAGGTaGTACCATTCATTCACAAGGAATCCAGGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: YSSKSLNQVTER*YHSFTRNPGRR
Trigger: TCTCCTCCCTGGATTCCTTGTGAATGAATGGTATCACCTCTCAGTCACTTGATTAAGACTTTTGGAAGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554157.5
CDS GCA 72 bp TTTGTAGGGATCAAAACAACATGTGACAGTAGTTCATaGAGATCTGCCACACACATGTATATGCTATTCGCT +
Preference number: 6 (lower is better)
Translates to: FVGIKTTCDSSS*RSATHMYMLFA
Trigger: AGCGAATAGCATATACATGTGTGTGGCAGATCTGCATGAACTACTGTCACATGTTGTTTTGATCCCTACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553828.1
CDS CCA 72 bp GCAGATCTGCCACACACATGTATATGCTATTCGCTATaGATGAATCGAGAAAACAACGTCCTCTCTAAAAAT +
Preference number: 6 (lower is better)
Translates to: ADLPHTCICYSL*MNRENNVLSKN
Trigger: ATTTTTAGAGAGGACGTTGTTTTCTCGATTCATCCATAGCGAATAGCATATACATGTGTGTGGCAGATCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553828.1
CDS TCA 72 bp AAGACAGAAACTTTCACAGACTCGGATGGAGAGACATaGCATCTAAATGAAATGTTGTACACTGGATCAGAT +
Preference number: 6 (lower is better)
Translates to: KTETFTDSDGET*HLNEMLYTGSD
Trigger: ATCTGATCCAGTGTACAACATTTCATTTAGATGTCATGTCTCTCCATCCGAGTCTGTGAAAGTTTCTGTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556592.1
CDS TCA 72 bp ATCTGCCACACACATGTATATGCTATTCGCTATGGATaGATCGAGAAAACAACGTCCTCTCTAAAAATGTAC +
Preference number: 6 (lower is better)
Translates to: ICHTHVYAIRYG*IEKTTSSLKMY
Trigger: GTACATTTTTAGAGAGGACGTTGTTTTCTCGATTCATCCATAGCGAATAGCATATACATGTGTGTGGCAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553828.1
CDS TCA 72 bp ATGGAGAAGCCTATTCTTCCAAAAGTCTTAATCAAGTaGCTGAGAGGTGATACCATTCATTCACAAGGAATC +
Preference number: 6 (lower is better)
Translates to: MEKPILPKVLIK*LRGDTIHSQGI
Trigger: GATTCCTTGTGAATGAATGGTATCACCTCTCAGTCACTTGATTAAGACTTTTGGAAGAATAGGCTTCTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554157.5
CDS GCA 72 bp GAAATGTTGTACACTGGATCAGATCCTTCTACCACTTaGTACCATGTACATTGCAAAGAAAACTTCTCATCA +
Preference number: 6 (lower is better)
Translates to: EMLYTGSDPSTT*YHVHCKENFSS
Trigger: TGATGAGAAGTTTTCTTTGCAATGTACATGGTAGCAAGTGGTAGAAGGATCTGATCCAGTGTACAACATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556592.1
CDS CAA 72 bp GTTAGTAATAAAGCACTCAAAGTCAAACCTACTGCATaGCTTGTCCAAGAACAGACTAAACTGCGTATCAAG +
Preference number: 6 (lower is better)
Translates to: VSNKALKVKPTA*LVQEQTKLRIK
Trigger: CTTGATACGCAGTTTAGTCTGTTCTTGGACAAGCAATGCAGTAGGTTTGACTTTGAGTGCTTTATTACTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554992.1
CDS CAA 72 bp TGGATCAGATCCTTCTACCACTTGCTACCATGTACATaGCAAAGAAAACTTCTCATCACTGGTGATTATATA +
Preference number: 6 (lower is better)
Translates to: WIRSFYHLLPCT*QRKLLITGDYI
Trigger: TATATAATCACCAGTGATGAGAAGTTTTCTTTGCAATGTACATGGTAGCAAGTGGTAGAAGGATCTGATCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556592.1
CDS CAA 90 bp GTTGTACACTGGATCAGATCCTTCTACCACTTGCTACCATGTACATaGCAAAGAAAACTTCTCATCACTGGTGATTATATATATATAAAC +
Preference number: 6 (lower is better)
Translates to: VVHWIRSFYHLLPCT*QRKLLITGDYIYIN
Trigger: GTTTATATATATATAATCACCAGTGATGAGAAGTTTTCTTTGCAATGTACATGGTAGCAAGTGGTAGAAGGATCTGATCCAGTGTACAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556592.1
CDS CAA 90 bp AGGCAACATCAGGGAACTTCCCAGAATGGTGGTAATGATCTCTATTaGGGTTATACAGATATTTTCCATTTGTTAAAAGCTATGAAATGT +
Preference number: 6 (lower is better)
Translates to: RQHQGTSQNGGNDLY*GYTDIFHLLKAMKC
Trigger: ACATTTCATAGCTTTTAACAAATGGAAAATATCTGTATAACCCAAATAGAGATCATTACCACCATTCTGGGAAGTTCCCTGATGTTGCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554157.5
CDS GCA 72 bp TGCTCTAGTAAACTAAACTGTTCTCAACTATCTTTTTaGCCTTCAACTCGTCAAATATACAAACCCCTAGAA +
Preference number: 6 (lower is better)
Translates to: CSSKLNCSQLSF*PSTRQIYKPLE
Trigger: TTCTAGGGGTTTGTATATTTGACGAGTTGAAGGGCAAAAAGATAGTTGAGAACAGTTTAGTTTACTAGAGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554157.5
CDS CAA 72 bp CAGGGAACTTCCCAGAATGGTGGTAATGATCTCTATTaGGGTTATACAGATATTTTCCATTTGTTAAAAGCT +
Preference number: 6 (lower is better)
Translates to: QGTSQNGGNDLY*GYTDIFHLLKA
Trigger: AGCTTTTAACAAATGGAAAATATCTGTATAACCCAAATAGAGATCATTACCACCATTCTGGGAAGTTCCCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554157.5