Pregenerated sensors for TTC4 (Homo sapiens)
Ensembl gene IDs: ENSG00000243725Ensembl transcript IDs: ENST00000371281.4, ENST00000486091.1
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCAGGCCAGCTGCTGTAGCTCGGCTCCATGGAACGGCTCCTCTGTaGGAAATGTGTTCTCACAGCAGAGGGAAGAGCACAGGCCAACCA | + |
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Preference number: 1 (lower is better) Translates to: CRPAAVARLHGTAPL*EMCSHSRGKSTGQP Trigger: TGGTTGGCCTGTGCTCTTCCCTCTGCTGTGAGAACACATTTCCCACAGAGGAGCCGTTCCATGGAGCCGAGCTACAGCAGCTGGCCTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| 3UTR CCA 90 bp | TGTGACACTCAGTGGCTGCAGGCCAGCTGCTGTAGCTCGGCTCCATaGAACGGCTCCTCTGTGGGAAATGTGTTCTCACAGCAGAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: CDTQWLQASCCSSAP*NGSSVGNVFSQQRE Trigger: TTCCCTCTGCTGTGAGAACACATTTCCCACAGAGGAGCCGTTCCATGGAGCCGAGCTACAGCAGCTGGCCTGCAGCCACTGAGTGTCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| 3UTR GCA 90 bp | CATGACTCTTCAGGCTTCTGTCAGACGCAGGACAGCTCATGCCTGTaGATATCCCTCTGCATTGGGAGCAGGGAAGTACACTCTCCCGGG | + |
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Preference number: 1 (lower is better) Translates to: HDSSGFCQTQDSSCL*ISLCIGSREVHSPG Trigger: CCCGGGAGAGTGTACTTCCCTGCTCCCAATGCAGAGGGATATGCACAGGCATGAGCTGTCCTGCGTCTGACAGAAGCCTGAAGAGTCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| 3UTR GCA 90 bp | TACTACAGCAAACATTGCTCTCTCATTGCTGTGACACTCAGTGGCTaGAGGCCAGCTGCTGTAGCTCGGCTCCATGGAACGGCTCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: YYSKHCSLIAVTLSG*RPAAVARLHGTAPL Trigger: CAGAGGAGCCGTTCCATGGAGCCGAGCTACAGCAGCTGGCCTGCAGCCACTGAGTGTCACAGCAATGAGAGAGCAATGTTTGCTGTAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| 3UTR CCA 90 bp | TGCTTACTACAGCAAACATTGCTCTCTCATTGCTGTGACACTCAGTaGCTGCAGGCCAGCTGCTGTAGCTCGGCTCCATGGAACGGCTCC | + |
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Preference number: 1 (lower is better) Translates to: CLLQQTLLSHCCDTQ*LQASCCSSAPWNGS Trigger: GGAGCCGTTCCATGGAGCCGAGCTACAGCAGCTGGCCTGCAGCCACTGAGTGTCACAGCAATGAGAGAGCAATGTTTGCTGTAGTAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| 3UTR GCA 90 bp | ACCACACATGACTCTTCAGGCTTCTGTCAGACGCAGGACAGCTCATaGCTGTGCATATCCCTCTGCATTGGGAGCAGGGAAGTACACTCT | + |
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Preference number: 1 (lower is better) Translates to: TTHDSSGFCQTQDSS*LCISLCIGSREVHS Trigger: AGAGTGTACTTCCCTGCTCCCAATGCAGAGGGATATGCACAGGCATGAGCTGTCCTGCGTCTGACAGAAGCCTGAAGAGTCATGTGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| 3UTR GCA 90 bp | ACCCCTAAATCTCACTGCTTACTACAGCAAACATTGCTCTCTCATTaGTGTGACACTCAGTGGCTGCAGGCCAGCTGCTGTAGCTCGGCT | + |
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Preference number: 1 (lower is better) Translates to: TPKSHCLLQQTLLSH*CDTQWLQASCCSSA Trigger: AGCCGAGCTACAGCAGCTGGCCTGCAGCCACTGAGTGTCACAGCAATGAGAGAGCAATGTTTGCTGTAGTAAGCAGTGAGATTTAGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| 3UTR-3UTR GCA 90 bp | ACTCAGTGGCTGCAGGCCAGCTGCTGTAGCTCGGCTCCATGGAACGGCTCCTCTACGCAGGACAGCTCATaGCTGTGCATATCCCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: TQWLQASCCSSAPWNGSSTQDSS*LCISLC Trigger: GCAGAGGGATATGCACAGGCATGAGCTGTCCTGCGT...AGAGGAGCCGTTCCATGGAGCCGAGCTACAGCAGCTGGCCTGCAGCCACTGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| 3UTR-3UTR GCA 90 bp | AGCTGCTGTAGCTCGGCTCCATGGAACGGCTCCTCTGTGGGAAATGTGTTCTCAGACAGCTCATGCCTGTaGATATCCCTCTGCATTGGG | + |
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Preference number: 2 (lower is better) Translates to: SCCSSAPWNGSSVGNVFSDSSCL*ISLCIG Trigger: CCCAATGCAGAGGGATATGCACAGGCATGAGCTGTC...TGAGAACACATTTCCCACAGAGGAGCCGTTCCATGGAGCCGAGCTACAGCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| 3UTR-3UTR CCA 90 bp | AGCTCATGCCTGTGCATATCCCTCTGCATTGGGAGCAGGGAAGTACACTCTCCCACGGAAAGAAAGCACTaGACTCCAGCAGTATGTCCA | + |
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Preference number: 2 (lower is better) Translates to: SSCLCISLCIGSREVHSPTERKH*TPAVCP Trigger: TGGACATACTGCTGGAGTCCAGTGCTTTCTTTCCGT...GGGAGAGTGTACTTCCCTGCTCCCAATGCAGAGGGATATGCACAGGCATGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| 3UTR-3UTR TCA 90 bp | ACTGCTTACTACAGCAAACATTGCTCTCTCATTGCTGTGACACTCAGTGGCTGCAGCAGTATGTCCAGCTaGTTCAGGTGTGCTAGGTTC | + |
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Preference number: 2 (lower is better) Translates to: TAYYSKHCSLIAVTLSGCSSMSS*FRCARF Trigger: GAACCTAGCACACCTGAATCAGCTGGACATACTGCT...GCAGCCACTGAGTGTCACAGCAATGAGAGAGCAATGTTTGCTGTAGTAAGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| 3UTR-3UTR GCA 90 bp | CACTGCTTACTACAGCAAACATTGCTCTCTCATTGCTGTGACACTCAGTGGCTGCCTAAATGTCAAAACTaGAGAGGAACTCAAGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: HCLLQQTLLSHCCDTQWLPKCQN*RGTQEA Trigger: GGCCTCTTGAGTTCCTCTGCAGTTTTGACATTTAGG...CAGCCACTGAGTGTCACAGCAATGAGAGAGCAATGTTTGCTGTAGTAAGCAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| 3UTR-3UTR GCA 90 bp | CTAAATCTCACTGCTTACTACAGCAAACATTGCTCTCTCATTGCTGTGACACTCCTGTGCATATCCCTCTaGATTGGGAGCAGGGAAGTA | + |
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Preference number: 2 (lower is better) Translates to: LNLTAYYSKHCSLIAVTLLCISL*IGSREV Trigger: TACTTCCCTGCTCCCAATGCAGAGGGATATGCACAG...GAGTGTCACAGCAATGAGAGAGCAATGTTTGCTGTAGTAAGCAGTGAGATTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| 3UTR GCA 72 bp | TCTCATTGCTGTGACACTCAGTGGCTGCAGGCCAGCTaGTGTAGCTCGGCTCCATGGAACGGCTCCTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: SHCCDTQWLQAS*CSSAPWNGSSV Trigger: CACAGAGGAGCCGTTCCATGGAGCCGAGCTACAGCAGCTGGCCTGCAGCCACTGAGTGTCACAGCAATGAGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| 3UTR CCA 72 bp | CAGTGGCTGCAGGCCAGCTGCTGTAGCTCGGCTCCATaGAACGGCTCCTCTGTGGGAAATGTGTTCTCACAG | + |
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Preference number: 3 (lower is better) Translates to: QWLQASCCSSAP*NGSSVGNVFSQ Trigger: CTGTGAGAACACATTTCCCACAGAGGAGCCGTTCCATGGAGCCGAGCTACAGCAGCTGGCCTGCAGCCACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| 3UTR CCA 72 bp | CAGCAAACATTGCTCTCTCATTGCTGTGACACTCAGTaGCTGCAGGCCAGCTGCTGTAGCTCGGCTCCATGG | + |
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Preference number: 3 (lower is better) Translates to: QQTLLSHCCDTQ*LQASCCSSAPW Trigger: CCATGGAGCCGAGCTACAGCAGCTGGCCTGCAGCCACTGAGTGTCACAGCAATGAGAGAGCAATGTTTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| 3UTR GCA 72 bp | TCAGGCTTCTGTCAGACGCAGGACAGCTCATGCCTGTaGATATCCCTCTGCATTGGGAGCAGGGAAGTACAC | + |
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Preference number: 3 (lower is better) Translates to: SGFCQTQDSSCL*ISLCIGSREVH Trigger: GTGTACTTCCCTGCTCCCAATGCAGAGGGATATGCACAGGCATGAGCTGTCCTGCGTCTGACAGAAGCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| 3UTR GCA 72 bp | GACTCTTCAGGCTTCTGTCAGACGCAGGACAGCTCATaGCTGTGCATATCCCTCTGCATTGGGAGCAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: DSSGFCQTQDSS*LCISLCIGSRE Trigger: TTCCCTGCTCCCAATGCAGAGGGATATGCACAGGCATGAGCTGTCCTGCGTCTGACAGAAGCCTGAAGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| 3UTR GCA 72 bp | AAACATTGCTCTCTCATTGCTGTGACACTCAGTGGCTaGAGGCCAGCTGCTGTAGCTCGGCTCCATGGAACG | + |
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Preference number: 3 (lower is better) Translates to: KHCSLIAVTLSG*RPAAVARLHGT Trigger: CGTTCCATGGAGCCGAGCTACAGCAGCTGGCCTGCAGCCACTGAGTGTCACAGCAATGAGAGAGCAATGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| 3UTR-3UTR CAA 90 bp | AGCTGCTGTAGCTCGGCTCCATGGAACGGCTCCTCTGTGGGAAATGTGTTCTCAGCATATCCCTCTGCATaGGGAGCAGGGAAGTACACT | + |
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Preference number: 3 (lower is better) Translates to: SCCSSAPWNGSSVGNVFSAYPSA*GAGKYT Trigger: AGTGTACTTCCCTGCTCCCAATGCAGAGGGATATGC...TGAGAACACATTTCCCACAGAGGAGCCGTTCCATGGAGCCGAGCTACAGCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| 3UTR GCA 72 bp | TCTCACTGCTTACTACAGCAAACATTGCTCTCTCATTaGTGTGACACTCAGTGGCTGCAGGCCAGCTGCTGT | + |
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Preference number: 3 (lower is better) Translates to: SHCLLQQTLLSH*CDTQWLQASCC Trigger: ACAGCAGCTGGCCTGCAGCCACTGAGTGTCACAGCAATGAGAGAGCAATGTTTGCTGTAGTAAGCAGTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| 3UTR-3UTR CAA 90 bp | ACTGCTTACTACAGCAAACATTGCTCTCTCATTGCTGTGACACTCAGTGGCTGCCTATGCATTGTTTGTTaGTGTGTAGATGTGCAGTTT | + |
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Preference number: 3 (lower is better) Translates to: TAYYSKHCSLIAVTLSGCLCIVC*CVDVQF Trigger: AAACTGCACATCTACACACAAACAAACAATGCATAG...GCAGCCACTGAGTGTCACAGCAATGAGAGAGCAATGTTTGCTGTAGTAAGCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| CDS-3UTR TCA 90 bp | GCTTCTGTCAGACGCAGGACAGCTCATGCCTGTGCATATCCCTCTGCATTGGGAGTCCATGACGTCGTCTaGGGTGGGATCCTGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: ASVRRRTAHACAYPSALGVHDVV*GGILPR Trigger: CCTGGGCAGGATCCCACCTCAGACGACGTCATGGAC...TCCCAATGCAGAGGGATATGCACAGGCATGAGCTGTCCTGCGTCTGACAGAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| CDS-3UTR GCA 90 bp | ACTCAGTGGCTGCAGGCCAGCTGCTGTAGCTCGGCTCCATGGAACGGCTCCTCTTCTGAGGTGGGATCCTaGCCAGGTTGTTCCATAGCT | + |
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Preference number: 4 (lower is better) Translates to: TQWLQASCCSSAPWNGSSSEVGS*PGCSIA Trigger: AGCTATGGAACAACCTGGGCAGGATCCCACCTCAGA...AGAGGAGCCGTTCCATGGAGCCGAGCTACAGCAGCTGGCCTGCAGCCACTGAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| CDS-3UTR GCA 90 bp | GCTTCTGTCAGACGCAGGACAGCTCATGCCTGTGCATATCCCTCTGCATTGGGATGGCTGCAGGCCAGCTaGTGTAGCTCGGCTCCATGG | + |
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Preference number: 4 (lower is better) Translates to: ASVRRRTAHACAYPSALGWLQAS*CSSAPW Trigger: CCATGGAGCCGAGCTACAGCAGCTGGCCTGCAGCCA...TCCCAATGCAGAGGGATATGCACAGGCATGAGCTGTCCTGCGTCTGACAGAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| CDS-3UTR GCA 90 bp | ACTCAGTGGCTGCAGGCCAGCTGCTGTAGCTCGGCTCCATGGAACGGCTCCTCTGAGCAGAACGAAAATTaGCCAGATAGTACTGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: TQWLQASCCSSAPWNGSSEQNEN*PDSTVL Trigger: CAGCACAGTACTATCTGGGCAATTTTCGTTCTGCTC...AGAGGAGCCGTTCCATGGAGCCGAGCTACAGCAGCTGGCCTGCAGCCACTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| CDS-3UTR GCA 90 bp | CCACACATGACTCTTCAGGCTTCTGTCAGACGCAGGACAGCTCATGCCTGTGCAACGCAGGACAGCTCATaGCTGTGCATATCCCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: PHMTLQASVRRRTAHACATQDSS*LCISLC Trigger: GCAGAGGGATATGCACAGGCATGAGCTGTCCTGCGT...TGCACAGGCATGAGCTGTCCTGCGTCTGACAGAAGCCTGAAGAGTCATGTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| CDS-3UTR TCA 90 bp | AGCTCATGCCTGTGCATATCCCTCTGCATTGGGAGCAGGGAAGTACACTCTCCCAGCAGTATGTCCAGCTaGTTCAGGTGTGCTAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: SSCLCISLCIGSREVHSPSSMSS*FRCARF Trigger: GAACCTAGCACACCTGAATCAGCTGGACATACTGCT...GGGAGAGTGTACTTCCCTGCTCCCAATGCAGAGGGATATGCACAGGCATGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| CDS-3UTR GCA 90 bp | CCACACATGACTCTTCAGGCTTCTGTCAGACGCAGGACAGCTCATGCCTGTGCACTGTGCATATCCCTCTaGATTGGGAGCAGGGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: PHMTLQASVRRRTAHACALCISL*IGSREV Trigger: TACTTCCCTGCTCCCAATGCAGAGGGATATGCACAG...TGCACAGGCATGAGCTGTCCTGCGTCTGACAGAAGCCTGAAGAGTCATGTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| CDS-3UTR GCA 90 bp | ACTCAGTGGCTGCAGGCCAGCTGCTGTAGCTCGGCTCCATGGAACGGCTCCTCTTACTACAGCAAACATTaGTCTCTCATTGCTGTGACA | + |
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Preference number: 4 (lower is better) Translates to: TQWLQASCCSSAPWNGSSYYSKH*SLIAVT Trigger: TGTCACAGCAATGAGAGAGCAATGTTTGCTGTAGTA...AGAGGAGCCGTTCCATGGAGCCGAGCTACAGCAGCTGGCCTGCAGCCACTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| CDS-3UTR CCA 90 bp | AGCTGCTGTAGCTCGGCTCCATGGAACGGCTCCTCTGTGGGAAATGTGTTCTCACATATCCCTCTGCATTaGGAGCAGGGAAGTACACTC | + |
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Preference number: 4 (lower is better) Translates to: SCCSSAPWNGSSVGNVFSHIPLH*EQGSTL Trigger: GAGTGTACTTCCCTGCTCCCAATGCAGAGGGATATG...TGAGAACACATTTCCCACAGAGGAGCCGTTCCATGGAGCCGAGCTACAGCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| CDS-3UTR GCA 90 bp | AGCTCATGCCTGTGCATATCCCTCTGCATTGGGAGCAGGGAAGTACACTCTCCCACATTGCTCTCTCATTaGTGTGACACTCAGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SSCLCISLCIGSREVHSPTLLSH*CDTQWL Trigger: CAGCCACTGAGTGTCACAGCAATGAGAGAGCAATGT...GGGAGAGTGTACTTCCCTGCTCCCAATGCAGAGGGATATGCACAGGCATGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| CDS-3UTR CCA 90 bp | CCACACATGACTCTTCAGGCTTCTGTCAGACGCAGGACAGCTCATGCCTGTGCAACGGAAAGAAAGCACTaGACTCCAGCAGTATGTCCA | + |
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Preference number: 4 (lower is better) Translates to: PHMTLQASVRRRTAHACATERKH*TPAVCP Trigger: TGGACATACTGCTGGAGTCCAGTGCTTTCTTTCCGT...TGCACAGGCATGAGCTGTCCTGCGTCTGACAGAAGCCTGAAGAGTCATGTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| CDS-3UTR GCA 90 bp | GCTTCTGTCAGACGCAGGACAGCTCATGCCTGTGCATATCCCTCTGCATTGGGAACAAAGTACCTCTGGTaGTGTAGAACCTGTAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: ASVRRRTAHACAYPSALGTKYLW*CRTCSK Trigger: CTTGCTACAGGTTCTACAGCACCAGAGGTACTTTGT...TCCCAATGCAGAGGGATATGCACAGGCATGAGCTGTCCTGCGTCTGACAGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| CDS-3UTR GCA 90 bp | CCACACATGACTCTTCAGGCTTCTGTCAGACGCAGGACAGCTCATGCCTGTGCACCCGGAGAAAATTCTTaGAAAAAGGAGAGGATCCTA | + |
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Preference number: 4 (lower is better) Translates to: PHMTLQASVRRRTAHACAPGENS*KKERIL Trigger: TAGGATCCTCTCCTTTTTGCAAGAATTTTCTCCGGG...TGCACAGGCATGAGCTGTCCTGCGTCTGACAGAAGCCTGAAGAGTCATGTGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| CDS-3UTR CCA 90 bp | ACTGCTTACTACAGCAAACATTGCTCTCTCATTGCTGTGACACTCAGTGGCTGCGGAACGGCTCCTCTGTaGGAAATGTGTTCTCACAGC | + |
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Preference number: 4 (lower is better) Translates to: TAYYSKHCSLIAVTLSGCGTAPL*EMCSHS Trigger: GCTGTGAGAACACATTTCCCACAGAGGAGCCGTTCC...GCAGCCACTGAGTGTCACAGCAATGAGAGAGCAATGTTTGCTGTAGTAAGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| CDS-3UTR CCA 90 bp | CTGTCAGACGCAGGACAGCTCATGCCTGTGCATATCCCTCTGCATTGGGAGCAGTTTAAGGACAGCAGCTaGCTTCAGTTTACTCATGTA | + |
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Preference number: 4 (lower is better) Translates to: LSDAGQLMPVHIPLHWEQFKDSS*LQFTHV Trigger: TACATGAGTAAACTGAAGCCAGCTGCTGTCCTTAAA...CTGCTCCCAATGCAGAGGGATATGCACAGGCATGAGCTGTCCTGCGTCTGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| CDS-3UTR TCA 90 bp | CTAAATCTCACTGCTTACTACAGCAAACATTGCTCTCTCATTGCTGTGACACTCAGGTTGTTCCATAGCTaGTGCCCTGCCTTCCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: LNLTAYYSKHCSLIAVTLRLFHS*CPAFQP Trigger: GGGCTGGAAGGCAGGGCATCAGCTATGGAACAACCT...GAGTGTCACAGCAATGAGAGAGCAATGTTTGCTGTAGTAAGCAGTGAGATTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| CDS-3UTR CCA 90 bp | CTAAATCTCACTGCTTACTACAGCAAACATTGCTCTCTCATTGCTGTGACACTCTGTAGCTCGGCTCCATaGAACGGCTCCTCTGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: LNLTAYYSKHCSLIAVTLCSSAP*NGSSVG Trigger: TCCCACAGAGGAGCCGTTCCATGGAGCCGAGCTACA...GAGTGTCACAGCAATGAGAGAGCAATGTTTGCTGTAGTAAGCAGTGAGATTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| 3UTR CAA 72 bp | CCAACCCCTAAATCTCACTGCTTACTACAGCAAACATaGCTCTCTCATTGCTGTGACACTCAGTGGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: PTPKSHCLLQQT*LSHCCDTQWLQ Trigger: CTGCAGCCACTGAGTGTCACAGCAATGAGAGAGCAATGTTTGCTGTAGTAAGCAGTGAGATTTAGGGGTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| CDS-3UTR CCA 90 bp | CACTGCTTACTACAGCAAACATTGCTCTCTCATTGCTGTGACACTCAGTGGCTGCTTGGCCTGTTCTTCTaGAGAACGCTCCTCATCAAA | + |
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Preference number: 4 (lower is better) Translates to: HCLLQQTLLSHCCDTQWLLGLFF*RTLLIK Trigger: TTTGATGAGGAGCGTTCTCCAGAAGAACAGGCCAAG...CAGCCACTGAGTGTCACAGCAATGAGAGAGCAATGTTTGCTGTAGTAAGCAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| CDS-3UTR GCA 90 bp | ACTGCTTACTACAGCAAACATTGCTCTCTCATTGCTGTGACACTCAGTGGCTGCCCTAAATGTCAAAACTaGAGAGGAACTCAAGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: TAYYSKHCSLIAVTLSGCPKCQN*RGTQEA Trigger: GGCCTCTTGAGTTCCTCTGCAGTTTTGACATTTAGG...GCAGCCACTGAGTGTCACAGCAATGAGAGAGCAATGTTTGCTGTAGTAAGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| CDS-3UTR GCA 90 bp | CTAAATCTCACTGCTTACTACAGCAAACATTGCTCTCTCATTGCTGTGACACTCGACAGCTCATGCCTGTaGATATCCCTCTGCATTGGG | + |
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Preference number: 4 (lower is better) Translates to: LNLTAYYSKHCSLIAVTLDSSCL*ISLCIG Trigger: CCCAATGCAGAGGGATATGCACAGGCATGAGCTGTC...GAGTGTCACAGCAATGAGAGAGCAATGTTTGCTGTAGTAAGCAGTGAGATTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| CDS-3UTR GCA 90 bp | CACTGCTTACTACAGCAAACATTGCTCTCTCATTGCTGTGACACTCAGTGGCTGACCCCTAAATCTCACTaGTTACTACAGCAAACATTG | + |
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Preference number: 4 (lower is better) Translates to: HCLLQQTLLSHCCDTQWLTPKSH*LLQQTL Trigger: CAATGTTTGCTGTAGTAAGCAGTGAGATTTAGGGGT...CAGCCACTGAGTGTCACAGCAATGAGAGAGCAATGTTTGCTGTAGTAAGCAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| CDS TCA 90 bp | AGACGCCTGCACAGGAAGCTCCCGGGGGTGTCAGAGCAGGACCAGTaGAGAAGAGCATCCATGCTGGGGGCCAGCAGGCCTGAGCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: RRLHRKLPGVSEQDQ*RRASMLGASRPEQG Trigger: CCCCTGCTCAGGCCTGCTGGCCCCCAGCATGGATGCTCTTCTTCACTGGTCCTGCTCTGACACCCCCGGGAGCTTCCTGTGCAGGCGTCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000486091.1 |
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| CDS-3UTR CAA 90 bp | TGCTCTCTCATTGCTGTGACACTCAGTGGCTGCAGGCCAGCTGCTGTAGCTCGGCTATGCATTGTTTGTTaGTGTGTAGATGTGCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: CSLIAVTLSGCRPAAVARLCIVC*CVDVQF Trigger: AAACTGCACATCTACACACAAACAAACAATGCATAG...CCGAGCTACAGCAGCTGGCCTGCAGCCACTGAGTGTCACAGCAATGAGAGAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| CDS-3UTR CAA 90 bp | GCTTCTGTCAGACGCAGGACAGCTCATGCCTGTGCATATCCCTCTGCATTGGGATTACTACAGCAAACATaGCTCTCTCATTGCTGTGAC | + |
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Preference number: 5 (lower is better) Translates to: ASVRRRTAHACAYPSALGLLQQT*LSHCCD Trigger: GTCACAGCAATGAGAGAGCAATGTTTGCTGTAGTAA...TCCCAATGCAGAGGGATATGCACAGGCATGAGCTGTCCTGCGTCTGACAGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| CDS-3UTR CAA 90 bp | ACTGCTTACTACAGCAAACATTGCTCTCTCATTGCTGTGACACTCAGTGGCTGCCTGATATTCCTAGCCTaGATGGCCTGGAGTAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: TAYYSKHCSLIAVTLSGCLIFLA*MAWSKA Trigger: GGCTTTACTCCAGGCCATCAAGGCTAGGAATATCAG...GCAGCCACTGAGTGTCACAGCAATGAGAGAGCAATGTTTGCTGTAGTAAGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371281.4 |
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| CDS GCA 90 bp | CCATCTTCCAAAGACAGAATCAAGGCTCAGAGAAGAACAACAACTTaGCAACATTACCCTGCTGGTAAACAGAAGAATCAAGACTCAAGG | + |
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Preference number: 5 (lower is better) Translates to: PSSKDRIKAQRRTTT*QHYPAGKQKNQDSR Trigger: CCTTGAGTCTTGATTCTTCTGTTTACCAGCAGGGTAATGTTGGCAAGTTGTTGTTCTTCTCTGAGCCTTGATTCTGTCTTTGGAAGATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486091.1 |
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| CDS TCA 90 bp | AGGCTAAGCCCAGGGAAAATTAAAAAGATGGCAACGGTTAGTAGTTaGATGCCTCCTTTATATGGTTGTGTAGCTGGGTGCTTTGCATTT | + |
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Preference number: 5 (lower is better) Translates to: RLSPGKIKKMATVSS*MPPLYGCVAGCFAF Trigger: AAATGCAAAGCACCCAGCTACACAACCATATAAAGGAGGCATTCAACTACTAACCGTTGCCATCTTTTTAATTTTCCCTGGGCTTAGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000486091.1 |
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| CDS CCA 72 bp | TCAGAGGCCATGTGGGGTGAAAAGGGTATCCATGCATaGGGACAAGTAATATGGAGTTTACAGGCCCAACTA | + |
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Preference number: 6 (lower is better) Translates to: SEAMWGEKGIHA*GQVIWSLQAQL Trigger: TAGTTGGGCCTGTAAACTCCATATTACTTGTCCCCATGCATGGATACCCTTTTCACCCCACATGGCCTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486091.1 |
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| CDS TCA 72 bp | CCAGGGAAAATTAAAAAGATGGCAACGGTTAGTAGTTaGATGCCTCCTTTATATGGTTGTGTAGCTGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: PGKIKKMATVSS*MPPLYGCVAGC Trigger: GCACCCAGCTACACAACCATATAAAGGAGGCATTCAACTACTAACCGTTGCCATCTTTTTAATTTTCCCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000486091.1 |
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| CDS GCA 72 bp | AAAGACAGAATCAAGGCTCAGAGAAGAACAACAACTTaGCAACATTACCCTGCTGGTAAACAGAAGAATCAA | + |
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Preference number: 6 (lower is better) Translates to: KDRIKAQRRTTT*QHYPAGKQKNQ Trigger: TTGATTCTTCTGTTTACCAGCAGGGTAATGTTGGCAAGTTGTTGTTCTTCTCTGAGCCTTGATTCTGTCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486091.1 |
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