RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTC38 (Homo sapiens)

Ensembl gene IDs: ENSG00000075234

Ensembl transcript IDs: ENST00000381031.8, ENST00000417709.5, ENST00000421359.5, ENST00000422713.1, ENST00000451998.1, ENST00000475467.1, ENST00000629918.1

Found 370 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGTTCTGCAGGGTGGAGGCGGCCAGGCTGGCTCACTGCATGAGGTaGACGGTAGCTGCCTTGCGGATGAGCCGCTCGGTCAGGGGCGAG +
Preference number: 1 (lower is better)
Translates to: RFCRVEAARLAHCMR*TVAALRMSRSVRGE
Trigger: CTCGCCCCTGACCGAGCGGCTCATCCGCAAGGCAGCTACCGTCCACCTCATGCAGTGAGCCAGCCTGGCCGCCTCCACCCTGCAGAACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451998.1
3UTR GCA 90 bp GGTGGAGGCGGCCAGGCTGGCTCACTGCATGAGGTGGACGGTAGCTaGCTTGCGGATGAGCCGCTCGGTCAGGGGCGAGTTGGGCTTCAA +
Preference number: 1 (lower is better)
Translates to: GGGGQAGSLHEVDGS*LADEPLGQGRVGLQ
Trigger: TTGAAGCCCAACTCGCCCCTGACCGAGCGGCTCATCCGCAAGGCAGCTACCGTCCACCTCATGCAGTGAGCCAGCCTGGCCGCCTCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451998.1
3UTR GCA 90 bp CCACCACTGAGGTTCTGCAGGGTGGAGGCGGCCAGGCTGGCTCACTaGATGAGGTGGACGGTAGCTGCCTTGCGGATGAGCCGCTCGGTC +
Preference number: 1 (lower is better)
Translates to: PPLRFCRVEAARLAH*MRWTVAALRMSRSV
Trigger: GACCGAGCGGCTCATCCGCAAGGCAGCTACCGTCCACCTCATGCAGTGAGCCAGCCTGGCCGCCTCCACCCTGCAGAACCTCAGTGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451998.1
3UTR TCA 90 bp CAAACAGGCTCTGGCCGTCTCCTGACCCTAACCCGGTGGAGCAGCTaGCTGGACGCAGTGACGCCACCACTGAGGTTCTGCAGGGTGGAG +
Preference number: 1 (lower is better)
Translates to: QTGSGRLLTLTRWSS*LDAVTPPLRFCRVE
Trigger: CTCCACCCTGCAGAACCTCAGTGGTGGCGTCACTGCGTCCAGTCAGCTGCTCCACCGGGTTAGGGTCAGGAGACGGCCAGAGCCTGTTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR CCA 90 bp GAAAGCAGCACAGCTGAGTCAGCGGCACATTCAGCAGGCGTTCAGTaGGGAAGCAGGAGACAGAGGCGGCGCTCACAGGACCCGCTCCAG +
Preference number: 1 (lower is better)
Translates to: ESSTAESAAHSAGVQ*GSRRQRRRSQDPLQ
Trigger: CTGGAGCGGGTCCTGTGAGCGCCGCCTCTGTCTCCTGCTTCCCCACTGAACGCCTGCTGAATGTGCCGCTGACTCAGCTGTGCTGCTTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR CCA 90 bp GTCTCTACTGCAGACACGTGCAGCTGCTCCCGCCTTGTCAGCGGCTaGGTTCTTGAAATCTCCACCATTGTCTTCACAGCCAGGTCCAGC +
Preference number: 1 (lower is better)
Translates to: VSTADTCSCSRLVSG*VLEISTIVFTARSS
Trigger: GCTGGACCTGGCTGTGAAGACAATGGTGGAGATTTCAAGAACCCAGCCGCTGACAAGGCGGGAGCAGCTGCACGTGTCTGCAGTAGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
3UTR TCA 90 bp TGCAGACACGTGCAGCTGCTCCCGCCTTGTCAGCGGCTGGGTTCTTaGAATCTCCACCATTGTCTTCACAGCCAGGTCCAGCTCTTTGTC +
Preference number: 1 (lower is better)
Translates to: CRHVQLLPPCQRLGS*NLHHCLHSQVQLFV
Trigger: GACAAAGAGCTGGACCTGGCTGTGAAGACAATGGTGGAGATTTCAAGAACCCAGCCGCTGACAAGGCGGGAGCAGCTGCACGTGTCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
3UTR TCA 90 bp CATGGCGTGGCCCATCACAAAGGTTGGATCTGCTGCTTTGAGCTTTaGCAGGCAGCCCTCGATGCCACCGAGACTCTTGTCATTGGTCCA +
Preference number: 1 (lower is better)
Translates to: HGVAHHKGWICCFEL*QAALDATETLVIGP
Trigger: TGGACCAATGACAAGAGTCTCGGTGGCATCGAGGGCTGCCTGTCAAAGCTCAAAGCAGCAGATCCAACCTTTGTGATGGGCCACGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
3UTR CCA 90 bp TGTAAAACTGAAGATCACCCTCTAACAGCCCTAACAAACAGGCTCTaGCCGTCTCCTGACCCTAACCCGGTGGAGCAGCTGACTGGACGC +
Preference number: 1 (lower is better)
Translates to: CKTEDHPLTALTNRL*PSPDPNPVEQLTGR
Trigger: GCGTCCAGTCAGCTGCTCCACCGGGTTAGGGTCAGGAGACGGCCAGAGCCTGTTTGTTAGGGCTGTTAGAGGGTGATCTTCAGTTTTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR CCA 90 bp ACAGGACCCGCTCCAGGCTTGTCACAGCCACACATCACAGCACTTTaGGTTTTGCCACAACAGAGCAGCTCTGAGCTCAATCCTTGCACC +
Preference number: 1 (lower is better)
Translates to: TGPAPGLSQPHITAL*VLPQQSSSELNPCT
Trigger: GGTGCAAGGATTGAGCTCAGAGCTGCTCTGTTGTGGCAAAACCCAAAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGGGTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR GCA 90 bp CCGCTCCAGGCTTGTCACAGCCACACATCACAGCACTTTGGGTTTTaGCACAACAGAGCAGCTCTGAGCTCAATCCTTGCACCTCAGAAG +
Preference number: 1 (lower is better)
Translates to: PLQACHSHTSQHFGF*HNRAALSSILAPQK
Trigger: CTTCTGAGGTGCAAGGATTGAGCTCAGAGCTGCTCTGTTGTGGCAAAACCCAAAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR GCA 90 bp GCTTTCGGAAAGTTCCCATTGGCAAATGTCTCTACTGCAGACACGTaGAGCTGCTCCCGCCTTGTCAGCGGCTGGGTTCTTGAAATCTCC +
Preference number: 1 (lower is better)
Translates to: AFGKFPLANVSTADT*SCSRLVSGWVLEIS
Trigger: GGAGATTTCAAGAACCCAGCCGCTGACAAGGCGGGAGCAGCTGCACGTGTCTGCAGTAGAGACATTTGCCAATGGGAACTTTCCGAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
3UTR GCA 90 bp GGAAAGTTCCCATTGGCAAATGTCTCTACTGCAGACACGTGCAGCTaGTCCCGCCTTGTCAGCGGCTGGGTTCTTGAAATCTCCACCATT +
Preference number: 1 (lower is better)
Translates to: GKFPLANVSTADTCS*SRLVSGWVLEISTI
Trigger: AATGGTGGAGATTTCAAGAACCCAGCCGCTGACAAGGCGGGAGCAGCTGCACGTGTCTGCAGTAGAGACATTTGCCAATGGGAACTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
3UTR TCA 90 bp TGCAAGGCAGGTGGAAAGAGCAGCACTCACACTGGCTGTGACTGCTaGAAAATGCTCATTGGCCCTTCTCGAGGACTGAAAGGAGATTCG +
Preference number: 1 (lower is better)
Translates to: CKAGGKSSTHTGCDC*KMLIGPSRGLKGDS
Trigger: CGAATCTCCTTTCAGTCCTCGAGAAGGGCCAATGAGCATTTTTCAGCAGTCACAGCCAGTGTGAGTGCTGCTCTTTCCACCTGCCTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR GCA 90 bp GAATCCCTAATTTCAGTACAAACTGAGGAACTTGAAAAACATCTGTaGACTGGGACCGCCCCTCACAGGAGGGCTGAAAGCAGCACAGCT +
Preference number: 1 (lower is better)
Translates to: ESLISVQTEELEKHL*TGTAPHRRAESSTA
Trigger: AGCTGTGCTGCTTTCAGCCCTCCTGTGAGGGGCGGTCCCAGTGCACAGATGTTTTTCAAGTTCCTCAGTTTGTACTGAAATTAGGGATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR CCA 90 bp GAATTCATTTTAATCACAGAAATTTGCCTGGGCTTGAGCAAACTGTaGGGACTCAATAGATTTGGAGGCCTCCTCTCCCTTCTGAGAGGC +
Preference number: 1 (lower is better)
Translates to: EFILITEICLGLSKL*GLNRFGGLLSLLRG
Trigger: GCCTCTCAGAAGGGAGAGGAGGCCTCCAAATCTATTGAGTCCCCACAGTTTGCTCAAGCCCAGGCAAATTTCTGTGATTAAAATGAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR TCA 90 bp GCCACACATCACAGCACTTTGGGTTTTGCCACAACAGAGCAGCTCTaGGCTCAATCCTTGCACCTCAGAAGTGCATTTATGATTAAAATC +
Preference number: 1 (lower is better)
Translates to: ATHHSTLGFATTEQL*AQSLHLRSAFMIKI
Trigger: GATTTTAATCATAAATGCACTTCTGAGGTGCAAGGATTGAGCTCAGAGCTGCTCTGTTGTGGCAAAACCCAAAGTGCTGTGATGTGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR CAA 90 bp GAGGCGGCCAGGCTGGCTCACTGCATGAGGTGGACGGTAGCTGCCTaGCGGATGAGCCGCTCGGTCAGGGGCGAGTTGGGCTTCAAGGCA +
Preference number: 2 (lower is better)
Translates to: EAARLAHCMRWTVAA*RMSRSVRGELGFKA
Trigger: TGCCTTGAAGCCCAACTCGCCCCTGACCGAGCGGCTCATCCGCAAGGCAGCTACCGTCCACCTCATGCAGTGAGCCAGCCTGGCCGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451998.1
3UTR-3UTR CCA 90 bp GTCCAAAGGCAGCAGGTGGGGGCCTCTCATAGTGTGACCCTGGGCAGGCCACTCATCCCAAGGGCAGCCTaGTGGGGACGGGGACAGGCA +
Preference number: 2 (lower is better)
Translates to: VQRQQVGASHSVTLGRPLIPRAA*WGRGQA
Trigger: TGCCTGTCCCCGTCCCCACCAGGCTGCCCTTGGGAT...GAGTGGCCTGCCCAGGGTCACACTATGAGAGGCCCCCACCTGCTGCCTTTGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR-3UTR GCA 90 bp GATGAGCCGCTCGGTCAGGGGCGAGTTGGGCTTCAAGGCATCACGCTCCATCAGCCACCACTGAGGTTCTaGAGGGTGGAGGCGGCCAGG +
Preference number: 2 (lower is better)
Translates to: DEPLGQGRVGLQGITLHQPPLRF*RVEAAR
Trigger: CCTGGCCGCCTCCACCCTGCAGAACCTCAGTGGTGG...CTGATGGAGCGTGATGCCTTGAAGCCCAACTCGCCCCTGACCGAGCGGCTCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451998.1
3UTR CAA 90 bp TGGACGGTAGCTGCCTTGCGGATGAGCCGCTCGGTCAGGGGCGAGTaGGGCTTCAAGGCATCACGCTCCATCAGAAGGCTCCCCTGTAAT +
Preference number: 2 (lower is better)
Translates to: WTVAALRMSRSVRGE*GFKASRSIRRLPCN
Trigger: ATTACAGGGGAGCCTTCTGATGGAGCGTGATGCCTTGAAGCCCAACTCGCCCCTGACCGAGCGGCTCATCCGCAAGGCAGCTACCGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451998.1
3UTR CAA 90 bp GGGAAGCAGGAGACAGAGGCGGCGCTCACAGGACCCGCTCCAGGCTaGTCACAGCCACACATCACAGCACTTTGGGTTTTGCCACAACAG +
Preference number: 2 (lower is better)
Translates to: GKQETEAALTGPAPG*SQPHITALWVLPQQ
Trigger: CTGTTGTGGCAAAACCCAAAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGGGTCCTGTGAGCGCCGCCTCTGTCTCCTGCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR-3UTR CCA 90 bp GCCAGGCTGGCTCACTGCATGAGGTGGACGGTAGCTGCCTTGCGGATGAGCCGCGTAATCCCTGCACGATaGAAGGATGAGGCAGGAAGA +
Preference number: 2 (lower is better)
Translates to: ARLAHCMRWTVAALRMSRVIPAR*KDEAGR
Trigger: TCTTCCTGCCTCATCCTTCCATCGTGCAGGGATTAC...GCGGCTCATCCGCAAGGCAGCTACCGTCCACCTCATGCAGTGAGCCAGCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451998.1
3UTR-3UTR TCA 90 bp GCGGCGCTCACAGGACCCGCTCCAGGCTTGTCACAGCCACACATCACAGCACTTACAACAGAGCAGCTCTaGGCTCAATCCTTGCACCTC +
Preference number: 2 (lower is better)
Translates to: AALTGPAPGLSQPHITALTTEQL*AQSLHL
Trigger: GAGGTGCAAGGATTGAGCTCAGAGCTGCTCTGTTGT...AAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGGGTCCTGTGAGCGCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR CAA 90 bp GCTGCTCCCGCCTTGTCAGCGGCTGGGTTCTTGAAATCTCCACCATaGTCTTCACAGCCAGGTCCAGCTCTTTGTCCAGCTTCACGGAGC +
Preference number: 2 (lower is better)
Translates to: AAPALSAAGFLKSPP*SSQPGPALCPASRS
Trigger: GCTCCGTGAAGCTGGACAAAGAGCTGGACCTGGCTGTGAAGACAATGGTGGAGATTTCAAGAACCCAGCCGCTGACAAGGCGGGAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
3UTR-3UTR TCA 90 bp GCGGCGCTCACAGGACCCGCTCCAGGCTTGTCACAGCCACACATCACAGCACTTACTGGCTGTGACTGCTaGAAAATGCTCATTGGCCCT +
Preference number: 2 (lower is better)
Translates to: AALTGPAPGLSQPHITALTGCDC*KMLIGP
Trigger: AGGGCCAATGAGCATTTTTCAGCAGTCACAGCCAGT...AAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGGGTCCTGTGAGCGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR-3UTR CCA 90 bp TGGCAAATGTCTCTACTGCAGACACGTGCAGCTGCTCCCGCCTTGTCAGCGGCTCCAGTAGCCATGGCGTaGCCCATCACAAAGGTTGGA +
Preference number: 2 (lower is better)
Translates to: WQMSLLQTRAAAPALSAAPVAMA*PITKVG
Trigger: TCCAACCTTTGTGATGGGCCACGCCATGGCTACTGG...AGCCGCTGACAAGGCGGGAGCAGCTGCACGTGTCTGCAGTAGAGACATTTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
3UTR-3UTR TCA 90 bp GCAGTAGACACATTCCCCTGGGAAACAGAATTTGCAAGGCAGGTGGAAAGAGCAACCCGGTGGAGCAGCTaGCTGGACGCAGTGACGCCA +
Preference number: 2 (lower is better)
Translates to: AVDTFPWETEFARQVERATRWSS*LDAVTP
Trigger: TGGCGTCACTGCGTCCAGTCAGCTGCTCCACCGGGT...TGCTCTTTCCACCTGCCTTGCAAATTCTGTTTCCCAGGGGAATGTGTCTACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR-3UTR GCA 90 bp CTTCCAGTGCCAATCAGCACAAGGCCAGTAGCCATGGCGTGGCCCATCACAAAGACAGGCAGCCCTCGATaGCACCGAGACTCTTGTCAT +
Preference number: 2 (lower is better)
Translates to: LPVPISTRPVAMAWPITKTGSPR*HRDSCH
Trigger: ATGACAAGAGTCTCGGTGGCATCGAGGGCTGCCTGT...CTTTGTGATGGGCCACGCCATGGCTACTGGCCTTGTGCTGATTGGCACTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
3UTR-3UTR TCA 90 bp ACCCGCTCCAGGCTTGTCACAGCCACACATCACAGCACTTTGGGTTTTGCCACACCCGGTACCCTCACCTaGAAAATGGGACAGCAACAC +
Preference number: 2 (lower is better)
Translates to: TRSRLVTATHHSTLGFATPGTLT*KMGQQH
Trigger: GTGTTGCTGTCCCATTTTTCAGGTGAGGGTACCGGG...TGTGGCAAAACCCAAAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR-3UTR GCA 90 bp CTTGTCACAGCCACACATCACAGCACTTTGGGTTTTGCCACAACAGAGCAGCTCAAGAAGGGTGGTGGATaGAGCAGCAGGGGGCTGCGT +
Preference number: 2 (lower is better)
Translates to: LVTATHHSTLGFATTEQLKKGGG*SSRGLR
Trigger: ACGCAGCCCCCTGCTGCTGCATCCACCACCCTTCTT...GAGCTGCTCTGTTGTGGCAAAACCCAAAGTGCTGTGATGTGTGGCTGTGACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR-3UTR CCA 90 bp TACAAACTGAGGAACTTGAAAAACATCTGTGCACTGGGACCGCCCCTCACAGGAGGGGGAGGCTGCCTCTaGAAGACCTGTCCCAGCAGA +
Preference number: 2 (lower is better)
Translates to: YKLRNLKNICALGPPLTGGGGCL*KTCPSR
Trigger: TCTGCTGGGACAGGTCTTCCAGAGGCAGCCTCCCCC...TCCTGTGAGGGGCGGTCCCAGTGCACAGATGTTTTTCAAGTTCCTCAGTTTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR-3UTR CCA 90 bp GCGGCGCTCACAGGACCCGCTCCAGGCTTGTCACAGCCACACATCACAGCACTTCCCTCACCTGAAAAATaGGACAGCAACACAATGAGA +
Preference number: 2 (lower is better)
Translates to: AALTGPAPGLSQPHITALPSPEK*DSNTMR
Trigger: TCTCATTGTGTTGCTGTCCCATTTTTCAGGTGAGGG...AAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGGGTCCTGTGAGCGCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR CAA 90 bp CCCGCTCCAGGCTTGTCACAGCCACACATCACAGCACTTTGGGTTTaGCCACAACAGAGCAGCTCTGAGCTCAATCCTTGCACCTCAGAA +
Preference number: 2 (lower is better)
Translates to: PAPGLSQPHITALWV*PQQSSSELNPCTSE
Trigger: TTCTGAGGTGCAAGGATTGAGCTCAGAGCTGCTCTGTTGTGGCAAAACCCAAAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR-3UTR TCA 90 bp CTTCACAGCCAGGTCCAGCTCTTTGTCCAGCTTCACGGAGCTTCCAGTGCCAATTTGGATCTGCTGCTTTaGGCTTTGACAGGCAGCCCT +
Preference number: 2 (lower is better)
Translates to: LHSQVQLFVQLHGASSANLDLLL*ALTGSP
Trigger: AGGGCTGCCTGTCAAAGCTCAAAGCAGCAGATCCAA...ATTGGCACTGGAAGCTCCGTGAAGCTGGACAAAGAGCTGGACCTGGCTGTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
3UTR-3UTR CCA 90 bp ACCCGCTCCAGGCTTGTCACAGCCACACATCACAGCACTTTGGGTTTTGCCACACTAACAAACAGGCTCTaGCCGTCTCCTGACCCTAAC +
Preference number: 2 (lower is better)
Translates to: TRSRLVTATHHSTLGFATLTNRL*PSPDPN
Trigger: GTTAGGGTCAGGAGACGGCCAGAGCCTGTTTGTTAG...TGTGGCAAAACCCAAAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR-3UTR CCA 90 bp GTCCAGCTTCACGGAGCTTCCAGTGCCAATCAGCACAAGGCCAGTAGCCATGGCGCCCATCACAAAGGTTaGATCTGCTGCTTTGAGCTT +
Preference number: 2 (lower is better)
Translates to: VQLHGASSANQHKASSHGAHHKG*ICCFEL
Trigger: AAGCTCAAAGCAGCAGATCCAACCTTTGTGATGGGC...GCCATGGCTACTGGCCTTGTGCTGATTGGCACTGGAAGCTCCGTGAAGCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
3UTR CAA 90 bp CATTGGCAAATGTCTCTACTGCAGACACGTGCAGCTGCTCCCGCCTaGTCAGCGGCTGGGTTCTTGAAATCTCCACCATTGTCTTCACAG +
Preference number: 2 (lower is better)
Translates to: HWQMSLLQTRAAAPA*SAAGFLKSPPLSSQ
Trigger: CTGTGAAGACAATGGTGGAGATTTCAAGAACCCAGCCGCTGACAAGGCGGGAGCAGCTGCACGTGTCTGCAGTAGAGACATTTGCCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
3UTR-3UTR TCA 90 bp AGGCATCACGCTCCATCAGAAGGCTCCCCTGTAATCCCTGCACGATGGAAGGATGGCAGGAAGATTCCTTaGGCCCAGGAGTTTGAGTTT +
Preference number: 2 (lower is better)
Translates to: RHHAPSEGSPVIPARWKDGRKIP*AQEFEF
Trigger: AAACTCAAACTCCTGGGCTCAAGGAATCTTCCTGCC...ATCCTTCCATCGTGCAGGGATTACAGGGGAGCCTTCTGATGGAGCGTGATGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451998.1
3UTR-3UTR CCA 90 bp TACAAACTGAGGAACTTGAAAAACATCTGTGCACTGGGACCGCCCCTCACAGGATCAGCAGGCGTTCAGTaGGGAAGCAGGAGACAGAGG +
Preference number: 2 (lower is better)
Translates to: YKLRNLKNICALGPPLTGSAGVQ*GSRRQR
Trigger: CCTCTGTCTCCTGCTTCCCCACTGAACGCCTGCTGA...TCCTGTGAGGGGCGGTCCCAGTGCACAGATGTTTTTCAAGTTCCTCAGTTTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR CAA 90 bp GTTCTTGAAATCTCCACCATTGTCTTCACAGCCAGGTCCAGCTCTTaGTCCAGCTTCACGGAGCTTCCAGTGCCAATCAGCACAAGGCCA +
Preference number: 2 (lower is better)
Translates to: VLEISTIVFTARSSS*SSFTELPVPISTRP
Trigger: TGGCCTTGTGCTGATTGGCACTGGAAGCTCCGTGAAGCTGGACAAAGAGCTGGACCTGGCTGTGAAGACAATGGTGGAGATTTCAAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
3UTR-3UTR TCA 90 bp GCGGCGCTCACAGGACCCGCTCCAGGCTTGTCACAGCCACACATCACAGCACTTTTTAAAATTAACCCGTaGCCCACTTCCTGTAAAACT +
Preference number: 2 (lower is better)
Translates to: AALTGPAPGLSQPHITALFKINP*PTSCKT
Trigger: AGTTTTACAGGAAGTGGGTCACGGGTTAATTTTAAA...AAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGGGTCCTGTGAGCGCCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR-3UTR CCA 90 bp TCCTGCCCTGATGAATCCCTAATTTCAGTACAAACTGAGGAACTTGAAAAACATGACGGGGACAGGCAGTaGGGGGAGGCTGCCTCTGGA +
Preference number: 2 (lower is better)
Translates to: SCPDESLISVQTEELEKHDGDRQ*GEAASG
Trigger: TCCAGAGGCAGCCTCCCCCCACTGCCTGTCCCCGTC...ATGTTTTTCAAGTTCCTCAGTTTGTACTGAAATTAGGGATTCATCAGGGCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR-3UTR TCA 90 bp AAACTGTGGGGACTCAATAGATTTGGAGGCCTCCTCTCCCTTCTGAGAGGCCTGAAATCATGCTCGACATaGAGCCCTGTTATGATGTGC +
Preference number: 2 (lower is better)
Translates to: KLWGLNRFGGLLSLLRGLKSCST*SPVMMC
Trigger: GCACATCATAACAGGGCTTCATGTCGAGCATGATTT...CAGGCCTCTCAGAAGGGAGAGGAGGCCTCCAAATCTATTGAGTCCCCACAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR-3UTR GCA 90 bp CTTGTCACAGCCACACATCACAGCACTTTGGGTTTTGCCACAACAGAGCAGCTCGTGACTGCTGAAAAATaGTCATTGGCCCTTCTCGAG +
Preference number: 2 (lower is better)
Translates to: LVTATHHSTLGFATTEQLVTAEK*SLALLE
Trigger: CTCGAGAAGGGCCAATGAGCATTTTTCAGCAGTCAC...GAGCTGCTCTGTTGTGGCAAAACCCAAAGTGCTGTGATGTGTGGCTGTGACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR-3UTR CCA 90 bp AAAATCATGCTCGACATGAAGCCCTGTTATGATGTGCAGTTTAAAAAGAGAAACCCAAGGGCAGCCTGGTaGGGACGGGGACAGGCAGTG +
Preference number: 2 (lower is better)
Translates to: KIMLDMKPCYDVQFKKRNPRAAW*GRGQAV
Trigger: CACTGCCTGTCCCCGTCCCCACCAGGCTGCCCTTGG...GTTTCTCTTTTTAAACTGCACATCATAACAGGGCTTCATGTCGAGCATGATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR-3UTR GCA 90 bp AAAATCATGCTCGACATGAAGCCCTGTTATGATGTGCAGTTTAAAAAGAGAAACCCACCACTGAGGTTCTaGAGGGTGGAGGCGGCCAGG +
Preference number: 2 (lower is better)
Translates to: KIMLDMKPCYDVQFKKRNPPLRF*RVEAAR
Trigger: CCTGGCCGCCTCCACCCTGCAGAACCTCAGTGGTGG...GTTTCTCTTTTTAAACTGCACATCATAACAGGGCTTCATGTCGAGCATGATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR-3UTR GCA 90 bp ATCACAGAAATTTGCCTGGGCTTGAGCAAACTGTGGGGACTCAATAGATTTGGACAGAAGGACCCCATGTaGGCGCTGATCTGTAAGAAG +
Preference number: 2 (lower is better)
Translates to: ITEICLGLSKLWGLNRFGQKDPM*ALICKK
Trigger: CTTCTTACAGATCAGCGCGCACATGGGGTCCTTCTG...TCCAAATCTATTGAGTCCCCACAGTTTGCTCAAGCCCAGGCAAATTTCTGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR-3UTR CCA 90 bp TACAAACTGAGGAACTTGAAAAACATCTGTGCACTGGGACCGCCCCTCACAGGACTGAAAAATGCTCATTaGCCCTTCTCGAGGACTGAA +
Preference number: 2 (lower is better)
Translates to: YKLRNLKNICALGPPLTGLKNAH*PFSRTE
Trigger: TTCAGTCCTCGAGAAGGGCCAATGAGCATTTTTCAG...TCCTGTGAGGGGCGGTCCCAGTGCACAGATGTTTTTCAAGTTCCTCAGTTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR CAA 90 bp GGAGGAACTGATGAATTCATTTTAATCACAGAAATTTGCCTGGGCTaGAGCAAACTGTGGGGACTCAATAGATTTGGAGGCCTCCTCTCC +
Preference number: 2 (lower is better)
Translates to: GGTDEFILITEICLG*SKLWGLNRFGGLLS
Trigger: GGAGAGGAGGCCTCCAAATCTATTGAGTCCCCACAGTTTGCTCAAGCCCAGGCAAATTTCTGTGATTAAAATGAATTCATCAGTTCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR-3UTR GCA 90 bp ATCACAGAAATTTGCCTGGGCTTGAGCAAACTGTGGGGACTCAATAGATTTGGACTGGGAAACAGAATTTaGAAGGCAGGTGGAAAGAGC +
Preference number: 2 (lower is better)
Translates to: ITEICLGLSKLWGLNRFGLGNRI*KAGGKS
Trigger: GCTCTTTCCACCTGCCTTGCAAATTCTGTTTCCCAG...TCCAAATCTATTGAGTCCCCACAGTTTGCTCAAGCCCAGGCAAATTTCTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR CCA 72 bp AGGGTGGAGGCGGCCAGGCTGGCTCACTGCATGAGGTaGACGGTAGCTGCCTTGCGGATGAGCCGCTCGGTC +
Preference number: 3 (lower is better)
Translates to: RVEAARLAHCMR*TVAALRMSRSV
Trigger: GACCGAGCGGCTCATCCGCAAGGCAGCTACCGTCCACCTCATGCAGTGAGCCAGCCTGGCCGCCTCCACCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451998.1
3UTR GCA 72 bp GGCCAGGCTGGCTCACTGCATGAGGTGGACGGTAGCTaGCTTGCGGATGAGCCGCTCGGTCAGGGGCGAGTT +
Preference number: 3 (lower is better)
Translates to: GQAGSLHEVDGS*LADEPLGQGRV
Trigger: AACTCGCCCCTGACCGAGCGGCTCATCCGCAAGGCAGCTACCGTCCACCTCATGCAGTGAGCCAGCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451998.1
3UTR TCA 72 bp TCTGGCCGTCTCCTGACCCTAACCCGGTGGAGCAGCTaGCTGGACGCAGTGACGCCACCACTGAGGTTCTGC +
Preference number: 3 (lower is better)
Translates to: SGRLLTLTRWSS*LDAVTPPLRFC
Trigger: GCAGAACCTCAGTGGTGGCGTCACTGCGTCCAGTCAGCTGCTCCACCGGGTTAGGGTCAGGAGACGGCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR TCA 72 bp CGCCCCAGAGACAGCAGAAGGACCCCATGTGCGCGCTaGTCTGTAAGAAGGGTGGTGGATGCAGCAGCAGGG +
Preference number: 3 (lower is better)
Translates to: RPRDSRRTPCAR*SVRRVVDAAAG
Trigger: CCCTGCTGCTGCATCCACCACCCTTCTTACAGATCAGCGCGCACATGGGGTCCTTCTGCTGTCTCTGGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR GCA 72 bp CCCATGTGCGCGCTGATCTGTAAGAAGGGTGGTGGATaGAGCAGCAGGGGGCTGCGTCCAAAGGCAGCAGGT +
Preference number: 3 (lower is better)
Translates to: PMCALICKKGGG*SSRGLRPKAAG
Trigger: ACCTGCTGCCTTTGGACGCAGCCCCCTGCTGCTGCATCCACCACCCTTCTTACAGATCAGCGCGCACATGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR CCA 72 bp ACAGCTGAGTCAGCGGCACATTCAGCAGGCGTTCAGTaGGGAAGCAGGAGACAGAGGCGGCGCTCACAGGAC +
Preference number: 3 (lower is better)
Translates to: TAESAAHSAGVQ*GSRRQRRRSQD
Trigger: GTCCTGTGAGCGCCGCCTCTGTCTCCTGCTTCCCCACTGAACGCCTGCTGAATGTGCCGCTGACTCAGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR GCA 72 bp CAAGACTCGCCCCAGAGACAGCAGAAGGACCCCATGTaGGCGCTGATCTGTAAGAAGGGTGGTGGATGCAGC +
Preference number: 3 (lower is better)
Translates to: QDSPQRQQKDPM*ALICKKGGGCS
Trigger: GCTGCATCCACCACCCTTCTTACAGATCAGCGCGCACATGGGGTCCTTCTGCTGTCTCTGGGGCGAGTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR GCA 72 bp GAGTCCTGCTCATCCTTCAGTAGCCAACTCAGAGGTTaGCCCCTCCAGGATGCCTTCCCTAGCCACTGTCCC +
Preference number: 3 (lower is better)
Translates to: ESCSSFSSQLRG*PLQDAFPSHCP
Trigger: GGGACAGTGGCTAGGGAAGGCATCCTGGAGGGGGCAACCTCTGAGTTGGCTACTGAAGGATGAGCAGGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422713.1
3UTR TCA 72 bp TGGCGTGGCCCATCACAAAGGTTGGATCTGCTGCTTTaGGCTTTGACAGGCAGCCCTCGATGCCACCGAGAC +
Preference number: 3 (lower is better)
Translates to: WRGPSQRLDLLL*ALTGSPRCHRD
Trigger: GTCTCGGTGGCATCGAGGGCTGCCTGTCAAAGCTCAAAGCAGCAGATCCAACCTTTGTGATGGGCCACGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
3UTR CCA 72 bp GAAGATCACCCTCTAACAGCCCTAACAAACAGGCTCTaGCCGTCTCCTGACCCTAACCCGGTGGAGCAGCTG +
Preference number: 3 (lower is better)
Translates to: EDHPLTALTNRL*PSPDPNPVEQL
Trigger: CAGCTGCTCCACCGGGTTAGGGTCAGGAGACGGCCAGAGCCTGTTTGTTAGGGCTGTTAGAGGGTGATCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR CCA 72 bp GCAGACACGTGCAGCTGCTCCCGCCTTGTCAGCGGCTaGGTTCTTGAAATCTCCACCATTGTCTTCACAGCC +
Preference number: 3 (lower is better)
Translates to: ADTCSCSRLVSG*VLEISTIVFTA
Trigger: GGCTGTGAAGACAATGGTGGAGATTTCAAGAACCCAGCCGCTGACAAGGCGGGAGCAGCTGCACGTGTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
3UTR GCA 72 bp GGCTTTCGGAAAGTTCCCATTGGCAAATGTCTCTACTaGAGACACGTGCAGCTGCTCCCGCCTTGTCAGCGG +
Preference number: 3 (lower is better)
Translates to: GFRKVPIGKCLY*RHVQLLPPCQR
Trigger: CCGCTGACAAGGCGGGAGCAGCTGCACGTGTCTGCAGTAGAGACATTTGCCAATGGGAACTTTCCGAAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
3UTR-3UTR CAA 90 bp CCCGCCTTGTCAGCGGCTGGGTTCTTGAAATCTCCACCATTGTCTTCACAGCCAGTTGGATCTGCTGCTTaGAGCTTTGACAGGCAGCCC +
Preference number: 3 (lower is better)
Translates to: PALSAAGFLKSPPLSSQPVGSAA*SFDRQP
Trigger: GGGCTGCCTGTCAAAGCTCAAAGCAGCAGATCCAAC...TGGCTGTGAAGACAATGGTGGAGATTTCAAGAACCCAGCCGCTGACAAGGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
3UTR-3UTR CAA 90 bp AAGTTCCCATTGGCAAATGTCTCTACTGCAGACACGTGCAGCTGCTCCCGCCTTGCCAGGTCCAGCTCTTaGTCCAGCTTCACGGAGCTT +
Preference number: 3 (lower is better)
Translates to: KFPLANVSTADTCSCSRLARSSS*SSFTEL
Trigger: AAGCTCCGTGAAGCTGGACAAAGAGCTGGACCTGGC...AAGGCGGGAGCAGCTGCACGTGTCTGCAGTAGAGACATTTGCCAATGGGAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
3UTR TCA 72 bp GCCCATCACAAAGGTTGGATCTGCTGCTTTGAGCTTTaGCAGGCAGCCCTCGATGCCACCGAGACTCTTGTC +
Preference number: 3 (lower is better)
Translates to: AHHKGWICCFEL*QAALDATETLV
Trigger: GACAAGAGTCTCGGTGGCATCGAGGGCTGCCTGTCAAAGCTCAAAGCAGCAGATCCAACCTTTGTGATGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
3UTR GCA 72 bp CCATTGGCAAATGTCTCTACTGCAGACACGTGCAGCTaGTCCCGCCTTGTCAGCGGCTGGGTTCTTGAAATC +
Preference number: 3 (lower is better)
Translates to: PLANVSTADTCS*SRLVSGWVLEI
Trigger: GATTTCAAGAACCCAGCCGCTGACAAGGCGGGAGCAGCTGCACGTGTCTGCAGTAGAGACATTTGCCAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
3UTR-3UTR CAA 90 bp TCCAGCTTCACGGAGCTTCCAGTGCCAATCAGCACAAGGCCAGTAGCCATGGCGATGCCACCGAGACTCTaGTCATTGGTCCATTTTACA +
Preference number: 3 (lower is better)
Translates to: SSFTELPVPISTRPVAMAMPPRL*SLVHFT
Trigger: TGTAAAATGGACCAATGACAAGAGTCTCGGTGGCAT...CGCCATGGCTACTGGCCTTGTGCTGATTGGCACTGGAAGCTCCGTGAAGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417709.5
3UTR CCA 72 bp GCTCCAGGCTTGTCACAGCCACACATCACAGCACTTTaGGTTTTGCCACAACAGAGCAGCTCTGAGCTCAAT +
Preference number: 3 (lower is better)
Translates to: APGLSQPHITAL*VLPQQSSSELN
Trigger: ATTGAGCTCAGAGCTGCTCTGTTGTGGCAAAACCCAAAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR GCA 72 bp ATTTCAGTACAAACTGAGGAACTTGAAAAACATCTGTaGACTGGGACCGCCCCTCACAGGAGGGCTGAAAGC +
Preference number: 3 (lower is better)
Translates to: ISVQTEELEKHL*TGTAPHRRAES
Trigger: GCTTTCAGCCCTCCTGTGAGGGGCGGTCCCAGTGCACAGATGTTTTTCAAGTTCCTCAGTTTGTACTGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR CCA 72 bp CAACCTTTGAACCACCAGGCAGTAGACACATTCCCCTaGGAAACAGAATTTGCAAGGCAGGTGGAAAGAGCA +
Preference number: 3 (lower is better)
Translates to: QPLNHQAVDTFP*ETEFARQVERA
Trigger: TGCTCTTTCCACCTGCCTTGCAAATTCTGTTTCCCAGGGGAATGTGTCTACTGCCTGGTGGTTCAAAGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR CCA 72 bp ACAGGCAGCCCTCGATGCCACCGAGACTCTTGTCATTaGTCCATTTTACATAAGATTCATCCCAGGACAGGA +
Preference number: 3 (lower is better)
Translates to: TGSPRCHRDSCH*SILHKIHPRTG
Trigger: TCCTGTCCTGGGATGAATCTTATGTAAAATGGACCAATGACAAGAGTCTCGGTGGCATCGAGGGCTGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417709.5
3UTR TCA 72 bp CACAGCACTTTGGGTTTTGCCACAACAGAGCAGCTCTaGGCTCAATCCTTGCACCTCAGAAGTGCATTTATG +
Preference number: 3 (lower is better)
Translates to: HSTLGFATTEQL*AQSLHLRSAFM
Trigger: CATAAATGCACTTCTGAGGTGCAAGGATTGAGCTCAGAGCTGCTCTGTTGTGGCAAAACCCAAAGTGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR CCA 72 bp TTAATCACAGAAATTTGCCTGGGCTTGAGCAAACTGTaGGGACTCAATAGATTTGGAGGCCTCCTCTCCCTT +
Preference number: 3 (lower is better)
Translates to: LITEICLGLSKL*GLNRFGGLLSL
Trigger: AAGGGAGAGGAGGCCTCCAAATCTATTGAGTCCCCACAGTTTGCTCAAGCCCAGGCAAATTTCTGTGATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR TCA 72 bp CGGTACCCTCACCTGAAAAATGGGACAGCAACACAATaGGACAACAGAGACTGTCTAGAATATAAAGAAAAG +
Preference number: 3 (lower is better)
Translates to: RYPHLKNGTATQ*DNRDCLEYKEK
Trigger: CTTTTCTTTATATTCTAGACAGTCTCTGTTGTCTCATTGTGTTGCTGTCCCATTTTTCAGGTGAGGGTACCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR TCA 72 bp GAAAGGAGATTCGGAATCACATTTAAAATTAACCCGTaGCCCACTTCCTGTAAAACTGAAGATCACCCTCTA +
Preference number: 3 (lower is better)
Translates to: ERRFGITFKINP*PTSCKTEDHPL
Trigger: TAGAGGGTGATCTTCAGTTTTACAGGAAGTGGGTCACGGGTTAATTTTAAATGTGATTCCGAATCTCCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp GCGGCCAGGCTGGCTCACTGCATGAGGTGGACGGTAGCTGCCTTGCGGATGAGCCGGGCCAGGAGGTGCTaGCAGTTCTCCCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: AARLAHCMRWTVAALRMSRARRC*QFSPGD
Trigger: ATCCCCAGGGGAGAACTGCCAGCACCTCCTGGCCCG...GCTCATCCGCAAGGCAGCTACCGTCCACCTCATGCAGTGAGCCAGCCTGGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451998.1
3UTR CAA 72 bp AGGCTGGCTCACTGCATGAGGTGGACGGTAGCTGCCTaGCGGATGAGCCGCTCGGTCAGGGGCGAGTTGGGC +
Preference number: 4 (lower is better)
Translates to: RLAHCMRWTVAA*RMSRSVRGELG
Trigger: GCCCAACTCGCCCCTGACCGAGCGGCTCATCCGCAAGGCAGCTACCGTCCACCTCATGCAGTGAGCCAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451998.1
CDS-3UTR GCA 90 bp GCAGACACGTGCAGCTGCTCCCGCCTTGTCAGCGGCTGGGTTCTTGAAATCTCCGCGCAGAGGCGAGGCTaGGGCCATGTTGCGCCGGGT +
Preference number: 4 (lower is better)
Translates to: ADTCSCSRLVSGWVLEISAQRRG*GHVAPG
Trigger: ACCCGGCGCAACATGGCCGCAGCCTCGCCTCTGCGC...GGAGATTTCAAGAACCCAGCCGCTGACAAGGCGGGAGCAGCTGCACGTGTCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS-3UTR GCA 90 bp CGGATGAGCCGCTCGGTCAGGGGCGAGTTGGGCTTCAAGGCATCACGCTCCATCCCACCACTGAGGTTCTaGAGGGTGGAGGCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RMSRSVRGELGFKASRSIPPLRF*RVEAAR
Trigger: CCTGGCCGCCTCCACCCTGCAGAACCTCAGTGGTGG...GATGGAGCGTGATGCCTTGAAGCCCAACTCGCCCCTGACCGAGCGGCTCATCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451998.1
CDS-3UTR CCA 90 bp AGCTGCCTTGCGGATGAGCCGCTCGGTCAGGGGCGAGTTGGGCTTCAAGGCATCTGGCGTCCCGCAGGGTaGTCAGCAGCTCCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: SCLADEPLGQGRVGLQGIWRPAG*SAAPVW
Trigger: CCACACAGGAGCTGCTGACCACCCTGCGGGACGCCA...GATGCCTTGAAGCCCAACTCGCCCCTGACCGAGCGGCTCATCCGCAAGGCAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451998.1
CDS-3UTR CCA 90 bp GGAGACAGAGGCGGCGCTCACAGGACCCGCTCCAGGCTTGTCACAGCCACACATCTGGCAGTTCTCCCCTaGGGATTCGCTGGCGTCCCG +
Preference number: 4 (lower is better)
Translates to: GDRGGAHRTRSRLVTATHLAVLP*GFAGVP
Trigger: CGGGACGCCAGCGAATCCCCAGGGGAGAACTGCCAG...ATGTGTGGCTGTGACAAGCCTGGAGCGGGTCCTGTGAGCGCCGCCTCTGTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp GACGGTAGCTGCCTTGCGGATGAGCCGCTCGGTCAGGGGCGAGTTGGGCTTCAACTGGCAGTTCTCCCCTaGGGATTCGCTGGCGTCCCG +
Preference number: 4 (lower is better)
Translates to: DGSCLADEPLGQGRVGLQLAVLP*GFAGVP
Trigger: CGGGACGCCAGCGAATCCCCAGGGGAGAACTGCCAG...TTGAAGCCCAACTCGCCCCTGACCGAGCGGCTCATCCGCAAGGCAGCTACCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451998.1
CDS-3UTR GCA 90 bp GCGGCGCTCACAGGACCCGCTCCAGGCTTGTCACAGCCACACATCACAGCACTTGCAGACACGTGCAGCTaGTCCCGCCTTGTCAGCGGC +
Preference number: 4 (lower is better)
Translates to: AALTGPAPGLSQPHITALADTCS*SRLVSG
Trigger: GCCGCTGACAAGGCGGGAGCAGCTGCACGTGTCTGC...AAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGGGTCCTGTGAGCGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp GGAGACAGAGGCGGCGCTCACAGGACCCGCTCCAGGCTTGTCACAGCCACACATACAGGCAGGACATCCTaGCACCGCTGGCCCACAGAC +
Preference number: 4 (lower is better)
Translates to: GDRGGAHRTRSRLVTATHTGRTS*HRWPTD
Trigger: GTCTGTGGGCCAGCGGTGGCAGGATGTCCTGCCTGT...ATGTGTGGCTGTGACAAGCCTGGAGCGGGTCCTGTGAGCGCCGCCTCTGTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp GTCCAAAGGCAGCAGGTGGGGGCCTCTCATAGTGTGACCCTGGGCAGGCCACTCGGTCTGGGGGTCGTGTaGACCCAGGGATGCCATCAG +
Preference number: 4 (lower is better)
Translates to: VQRQQVGASHSVTLGRPLGLGVV*TQGCHQ
Trigger: CTGATGGCATCCCTGGGTGCACACGACCCCCAGACC...GAGTGGCCTGCCCAGGGTCACACTATGAGAGGCCCCCACCTGCTGCCTTTGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp CGGATGAGCCGCTCGGTCAGGGGCGAGTTGGGCTTCAAGGCATCACGCTCCATCGGTCTGGGGGTCGTGTaGACCCAGGGATGCCATCAG +
Preference number: 4 (lower is better)
Translates to: RMSRSVRGELGFKASRSIGLGVV*TQGCHQ
Trigger: CTGATGGCATCCCTGGGTGCACACGACCCCCAGACC...GATGGAGCGTGATGCCTTGAAGCCCAACTCGCCCCTGACCGAGCGGCTCATCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451998.1
CDS-3UTR GCA 90 bp GACGGTAGCTGCCTTGCGGATGAGCCGCTCGGTCAGGGGCGAGTTGGGCTTCAAGAGGTGGACGGTAGCTaGCTTGCGGATGAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: DGSCLADEPLGQGRVGLQEVDGS*LADEPL
Trigger: GAGCGGCTCATCCGCAAGGCAGCTACCGTCCACCTC...TTGAAGCCCAACTCGCCCCTGACCGAGCGGCTCATCCGCAAGGCAGCTACCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451998.1
CDS-3UTR CCA 90 bp GGAGACAGAGGCGGCGCTCACAGGACCCGCTCCAGGCTTGTCACAGCCACACATAGCTCCTGTGTGGTCTaGGGGTCGTGTGCACCCAGG +
Preference number: 4 (lower is better)
Translates to: GDRGGAHRTRSRLVTATHSSCVV*GSCAPR
Trigger: CCTGGGTGCACACGACCCCCAGACCACACAGGAGCT...ATGTGTGGCTGTGACAAGCCTGGAGCGGGTCCTGTGAGCGCCGCCTCTGTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp CGGCGCTCACAGGACCCGCTCCAGGCTTGTCACAGCCACACATCACAGCACTTTGACGGGGACAGGCAGTaGGGGGAGGCTGCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: RRSQDPLQACHSHTSQHFDGDRQ*GEAASG
Trigger: TCCAGAGGCAGCCTCCCCCCACTGCCTGTCCCCGTC...AAAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGGGTCCTGTGAGCGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp CAGCTTCACGGAGCTTCCAGTGCCAATCAGCACAAGGCCAGTAGCCATGGCGTGGGGCCTTCCTGGGAGTaGGCGGGGCGGTCGCGGAAA +
Preference number: 4 (lower is better)
Translates to: QLHGASSANQHKASSHGVGPSWE*AGRSRK
Trigger: TTTCCGCGACCGCCCCGCCCACTCCCAGGAAGGCCC...CACGCCATGGCTACTGGCCTTGTGCTGATTGGCACTGGAAGCTCCGTGAAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417709.5
3UTR CAA 72 bp GCTGCCTTGCGGATGAGCCGCTCGGTCAGGGGCGAGTaGGGCTTCAAGGCATCACGCTCCATCAGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: AALRMSRSVRGE*GFKASRSIRRL
Trigger: GAGCCTTCTGATGGAGCGTGATGCCTTGAAGCCCAACTCGCCCCTGACCGAGCGGCTCATCCGCAAGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451998.1
CDS-3UTR TCA 90 bp CAGGCTGGCTCACTGCATGAGGTGGACGGTAGCTGCCTTGCGGATGAGCCGCTCACCTGGATGACCGAGTaGGACCTTGCCTCGGGCTAC +
Preference number: 4 (lower is better)
Translates to: QAGSLHEVDGSCLADEPLTWMTE*DLASGY
Trigger: GTAGCCCGAGGCAAGGTCTCACTCGGTCATCCAGGT...GAGCGGCTCATCCGCAAGGCAGCTACCGTCCACCTCATGCAGTGAGCCAGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451998.1
CDS-3UTR GCA 90 bp GTCCAAAGGCAGCAGGTGGGGGCCTCTCATAGTGTGACCCTGGGCAGGCCACTCCGTCTCTCTGGGCATTaGTCCCACCGAGCTGGACGA +
Preference number: 4 (lower is better)
Translates to: VQRQQVGASHSVTLGRPLRLSGH*SHRAGR
Trigger: TCGTCCAGCTCGGTGGGAGCAATGCCCAGAGAGACG...GAGTGGCCTGCCCAGGGTCACACTATGAGAGGCCCCCACCTGCTGCCTTTGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp CGGATGAGCCGCTCGGTCAGGGGCGAGTTGGGCTTCAAGGCATCACGCTCCATCCGTCTCTCTGGGCATTaGTCCCACCGAGCTGGACGA +
Preference number: 4 (lower is better)
Translates to: RMSRSVRGELGFKASRSIRLSGH*SHRAGR
Trigger: TCGTCCAGCTCGGTGGGAGCAATGCCCAGAGAGACG...GATGGAGCGTGATGCCTTGAAGCCCAACTCGCCCCTGACCGAGCGGCTCATCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451998.1
CDS-3UTR CCA 90 bp AGCTGCCTTGCGGATGAGCCGCTCGGTCAGGGGCGAGTTGGGCTTCAAGGCATCTCAGCAGCTCCTGTGTaGTCTGGGGGTCGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: SCLADEPLGQGRVGLQGISAAPV*SGGRVH
Trigger: GTGCACACGACCCCCAGACCACACAGGAGCTGCTGA...GATGCCTTGAAGCCCAACTCGCCCCTGACCGAGCGGCTCATCCGCAAGGCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451998.1
CDS-3UTR CCA 90 bp AACCCGGTGGAGCAGCTGACTGGACGCAGTGACGCCACCACTGAGGTTCTGCAGGGGGGAGGCTGCCTCTaGAAGACCTGTCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: NPVEQLTGRSDATTEVLQGGGCL*KTCPSR
Trigger: TCTGCTGGGACAGGTCTTCCAGAGGCAGCCTCCCCC...CTGCAGAACCTCAGTGGTGGCGTCACTGCGTCCAGTCAGCTGCTCCACCGGGTT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp GCCAATCAGCACAAGGCCAGTAGCCATGGCGTGGCCCATCACAAAGGTTGGATCGTCCACCGCGAGCTCTaGGCACCCGGGCCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: ANQHKASSHGVAHHKGWIVHREL*APGPSW
Trigger: CCAGGAAGGCCCGGGTGCCCAGAGCTCGCGGTGGAC...GATCCAACCTTTGTGATGGGCCACGCCATGGCTACTGGCCTTGTGCTGATTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS-3UTR GCA 90 bp CGGCGCTCACAGGACCCGCTCCAGGCTTGTCACAGCCACACATCACAGCACTTTGAGGTGGACGGTAGCTaGCTTGCGGATGAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: RRSQDPLQACHSHTSQHFEVDGS*LADEPL
Trigger: GAGCGGCTCATCCGCAAGGCAGCTACCGTCCACCTC...AAAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGGGTCCTGTGAGCGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp GTCCAAAGGCAGCAGGTGGGGGCCTCTCATAGTGTGACCCTGGGCAGGCCACTCCGTTGGCCTGCAGGCTaGGAAGGATGTGGGTATCGT +
Preference number: 4 (lower is better)
Translates to: VQRQQVGASHSVTLGRPLRWPAG*EGCGYR
Trigger: ACGATACCCACATCCTTCCCAGCCTGCAGGCCAACG...GAGTGGCCTGCCCAGGGTCACACTATGAGAGGCCCCCACCTGCTGCCTTTGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp CGCTCGGTCAGGGGCGAGTTGGGCTTCAAGGCATCACGCTCCATCAGAAGGCTCCGGTCAGGGGCGAGTTaGGCTTCAAGGCATCACGCT +
Preference number: 4 (lower is better)
Translates to: RSVRGELGFKASRSIRRLRSGAS*ASRHHA
Trigger: AGCGTGATGCCTTGAAGCCCAACTCGCCCCTGACCG...GAGCCTTCTGATGGAGCGTGATGCCTTGAAGCCCAACTCGCCCCTGACCGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451998.1
CDS-3UTR TCA 90 bp GGTAGCTGCCTTGCGGATGAGCCGCTCGGTCAGGGGCGAGTTGGGCTTCAAGGCCAGTTTAAGGCCGCGTaGATCAGCAGCTGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: GSCLADEPLGQGRVGLQGQFKAA*ISSWLK
Trigger: CTTCAACCAGCTGCTGATTCACGCGGCCTTAAACTG...GCCTTGAAGCCCAACTCGCCCCTGACCGAGCGGCTCATCCGCAAGGCAGCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451998.1
CDS-3UTR TCA 90 bp AGTCCTGCTCATCCTTCAGTAGCCAACTCAGAGGTTGCCCCCTCCAGGATGCCTGCTGCTCGCTCCTCCTaGCCAGGCCCTTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: SPAHPSVANSEVAPSRMPAARSS*PGPSRR
Trigger: CCTTCTGGAAGGGCCTGGTCAGGAGGAGCGAGCAGC...AGGCATCCTGGAGGGGGCAACCTCTGAGTTGGCTACTGAAGGATGAGCAGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS-3UTR GCA 90 bp CCCGCCTTGTCAGCGGCTGGGTTCTTGAAATCTCCACCATTGTCTTCACAGCCAAGGCTGCGGCCATGTTaGGCCGGGTCGGAGTCCACC +
Preference number: 4 (lower is better)
Translates to: PALSAAGFLKSPPLSSQPRLRPC*AGSEST
Trigger: GGTGGACTCCGACCCGGCGCAACATGGCCGCAGCCT...TGGCTGTGAAGACAATGGTGGAGATTTCAAGAACCCAGCCGCTGACAAGGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS-3UTR GCA 90 bp GCGGCGCTCACAGGACCCGCTCCAGGCTTGTCACAGCCACACATCACAGCACTTTCTACTGCAGACACGTaGAGCTGCTCCCGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: AALTGPAPGLSQPHITALSTADT*SCSRLV
Trigger: GACAAGGCGGGAGCAGCTGCACGTGTCTGCAGTAGA...AAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGGGTCCTGTGAGCGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp GGCTTCAAGGCATCACGCTCCATCAGAAGGCTCCCCTGTAATCCCTGCACGATGTCTCGGGCCAGGAGGTaGTGGCAGTTCTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GFKASRSIRRLPCNPCTMSRARR*WQFSPG
Trigger: CCCAGGGGAGAACTGCCAGCACCTCCTGGCCCGAGA...CATCGTGCAGGGATTACAGGGGAGCCTTCTGATGGAGCGTGATGCCTTGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451998.1
CDS-3UTR GCA 90 bp GCGGCCAGGCTGGCTCACTGCATGAGGTGGACGGTAGCTGCCTTGCGGATGAGCTATGGACGCTGGAGGTaGAGTTTAAGGCCGCGTGAA +
Preference number: 4 (lower is better)
Translates to: AARLAHCMRWTVAALRMSYGRWR*SLRPRE
Trigger: TTCACGCGGCCTTAAACTGCACCTCCAGCGTCCATA...GCTCATCCGCAAGGCAGCTACCGTCCACCTCATGCAGTGAGCCAGCCTGGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451998.1
CDS-3UTR GCA 90 bp GTCAGGGGCGAGTTGGGCTTCAAGGCATCACGCTCCATCAGAAGGCTCCCCTGTGCCAGGCTGGCTCACTaGATGAGGTGGACGGTAGCT +
Preference number: 4 (lower is better)
Translates to: VRGELGFKASRSIRRLPCARLAH*MRWTVA
Trigger: AGCTACCGTCCACCTCATGCAGTGAGCCAGCCTGGC...ACAGGGGAGCCTTCTGATGGAGCGTGATGCCTTGAAGCCCAACTCGCCCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451998.1
CDS-3UTR CCA 90 bp AACCCGGTGGAGCAGCTGACTGGACGCAGTGACGCCACCACTGAGGTTCTGCAGCCAGCATTGCATCGTTaGCCTGCAGGCTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: NPVEQLTGRSDATTEVLQPALHR*PAGWEG
Trigger: TCCTTCCCAGCCTGCAGGCCAACGATGCAATGCTGG...CTGCAGAACCTCAGTGGTGGCGTCACTGCGTCCAGTCAGCTGCTCCACCGGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp GTCCAAAGGCAGCAGGTGGGGGCCTCTCATAGTGTGACCCTGGGCAGGCCACTCTTGAACAGCAGGATGTaGTCTCGGCTGTGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: VQRQQVGASHSVTLGRPLLNSRM*SRLCFR
Trigger: CCGGAAGCACAGCCGAGACCACATCCTGCTGTTCAA...GAGTGGCCTGCCCAGGGTCACACTATGAGAGGCCCCCACCTGCTGCCTTTGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp CATCACGCTCCATCAGAAGGCTCCCCTGTAATCCCTGCACGATGGAAGGATGAGCCCCTGGGGATTCGCTaGCGTCCCGCAGGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: HHAPSEGSPVIPARWKDEPLGIR*RPAGWS
Trigger: TGACCACCCTGCGGGACGCCAGCGAATCCCCAGGGG...CTCATCCTTCCATCGTGCAGGGATTACAGGGGAGCCTTCTGATGGAGCGTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451998.1
CDS-3UTR CCA 90 bp AGGTGGACGGTAGCTGCCTTGCGGATGAGCCGCTCGGTCAGGGGCGAGTTGGGCGTAATCCCTGCACGATaGAAGGATGAGGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: RWTVAALRMSRSVRGELGVIPAR*KDEAGR
Trigger: TCTTCCTGCCTCATCCTTCCATCGTGCAGGGATTAC...GCCCAACTCGCCCCTGACCGAGCGGCTCATCCGCAAGGCAGCTACCGTCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451998.1
CDS-3UTR TCA 90 bp CGGATGAGCCGCTCGGTCAGGGGCGAGTTGGGCTTCAAGGCATCACGCTCCATCGAATCAGCAGCTGGTTaGAGACGTCTCTCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: RMSRSVRGELGFKASRSIESAAG*RRLSGH
Trigger: ATGCCCAGAGAGACGTCTTCAACCAGCTGCTGATTC...GATGGAGCGTGATGCCTTGAAGCCCAACTCGCCCCTGACCGAGCGGCTCATCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451998.1
CDS-3UTR GCA 90 bp GGAGACAGAGGCGGCGCTCACAGGACCCGCTCCAGGCTTGTCACAGCCACACATTGGCATCGAACAGCTTaGAGGCTTCGTTGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: GDRGGAHRTRSRLVTATHWHRTA*RLRCLW
Trigger: CCACAAGCAACGAAGCCTGCAAGCTGTTCGATGCCA...ATGTGTGGCTGTGACAAGCCTGGAGCGGGTCCTGTGAGCGCCGCCTCTGTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp CCCGCCTTGTCAGCGGCTGGGTTCTTGAAATCTCCACCATTGTCTTCACAGCCAGCATCCTTCCAGGCCTaGCAGTCGCGCAGAGGCGAG +
Preference number: 4 (lower is better)
Translates to: PALSAAGFLKSPPLSSQPASFQA*QSRRGE
Trigger: CTCGCCTCTGCGCGACTGCCAGGCCTGGAAGGATGC...TGGCTGTGAAGACAATGGTGGAGATTTCAAGAACCCAGCCGCTGACAAGGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS-3UTR CCA 90 bp GCTTCAAGGCATCACGCTCCATCAGAAGGCTCCCCTGTAATCCCTGCACGATGGAGCTCCTGTGTGGTCTaGGGGTCGTGTGCACCCAGG +
Preference number: 4 (lower is better)
Translates to: ASRHHAPSEGSPVIPARWSSCVV*GSCAPR
Trigger: CCTGGGTGCACACGACCCCCAGACCACACAGGAGCT...CCATCGTGCAGGGATTACAGGGGAGCCTTCTGATGGAGCGTGATGCCTTGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451998.1
CDS-3UTR CCA 90 bp AAACTGTGGGGACTCAATAGATTTGGAGGCCTCCTCTCCCTTCTGAGAGGCCTGCCCCTGGGGATTCGCTaGCGTCCCGCAGGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: KLWGLNRFGGLLSLLRGLPLGIR*RPAGWS
Trigger: TGACCACCCTGCGGGACGCCAGCGAATCCCCAGGGG...CAGGCCTCTCAGAAGGGAGAGGAGGCCTCCAAATCTATTGAGTCCCCACAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp AGGGGCGAGTTGGGCTTCAAGGCATCACGCTCCATCAGAAGGCTCCCCTGTAATCGATCCGGTAGCGGATaGGCAGGAGCAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RGELGFKASRSIRRLPCNRSGSG*AGAAPG
Trigger: TCCTGGAGCTGCTCCTGCCCATCCGCTACCGGATCG...ATTACAGGGGAGCCTTCTGATGGAGCGTGATGCCTTGAAGCCCAACTCGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451998.1
3UTR CAA 72 bp GAGACAGAGGCGGCGCTCACAGGACCCGCTCCAGGCTaGTCACAGCCACACATCACAGCACTTTGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: ETEAALTGPAPG*SQPHITALWVL
Trigger: CAAAACCCAAAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGGGTCCTGTGAGCGCCGCCTCTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR TCA 90 bp TTGCGGATGAGCCGCTCGGTCAGGGGCGAGTTGGGCTTCAAGGCATCACGCTCCGGCAGGAAGATTCCTTaGGCCCAGGAGTTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: LRMSRSVRGELGFKASRSGRKIP*AQEFEF
Trigger: AAACTCAAACTCCTGGGCTCAAGGAATCTTCCTGCC...GGAGCGTGATGCCTTGAAGCCCAACTCGCCCCTGACCGAGCGGCTCATCCGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451998.1
CDS-3UTR GCA 90 bp GGAGACAGAGGCGGCGCTCACAGGACCCGCTCCAGGCTTGTCACAGCCACACATTGCCTTTCACATAGCTaGTTAGGGGGATGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: GDRGGAHRTRSRLVTATHCLSHS*LGGCQV
Trigger: CACCTGACATCCCCCTAAGCAGCTATGTGAAAGGCA...ATGTGTGGCTGTGACAAGCCTGGAGCGGGTCCTGTGAGCGCCGCCTCTGTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp CGGCGCTCACAGGACCCGCTCCAGGCTTGTCACAGCCACACATCACAGCACTTTCCAGTAGCCATGGCGTaGCCCATCACAAAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: RRSQDPLQACHSHTSQHFPVAMA*PITKVG
Trigger: TCCAACCTTTGTGATGGGCCACGCCATGGCTACTGG...AAAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGGGTCCTGTGAGCGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp GCAGACACGTGCAGCTGCTCCCGCCTTGTCAGCGGCTGGGTTCTTGAAATCTCCCGCCTTGTCAGCGGCTaGGTTCTTGAAATCTCCACC +
Preference number: 4 (lower is better)
Translates to: ADTCSCSRLVSGWVLEISRLVSG*VLEIST
Trigger: GGTGGAGATTTCAAGAACCCAGCCGCTGACAAGGCG...GGAGATTTCAAGAACCCAGCCGCTGACAAGGCGGGAGCAGCTGCACGTGTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS-3UTR CCA 90 bp ACCCGCTCCAGGCTTGTCACAGCCACACATCACAGCACTTTGGGTTTTGCCACACGATCCGGTAGCGGATaGGCAGGAGCAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TRSRLVTATHHSTLGFATRSGSG*AGAAPG
Trigger: TCCTGGAGCTGCTCCTGCCCATCCGCTACCGGATCG...TGTGGCAAAACCCAAAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp GATGAGCCGCTCGGTCAGGGGCGAGTTGGGCTTCAAGGCATCACGCTCCATCAGCGGGCTACGTTCTTATaGACGCTGGAGGTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: DEPLGQGRVGLQGITLHQRATFL*TLEVQF
Trigger: AAACTGCACCTCCAGCGTCCATAAGAACGTAGCCCG...CTGATGGAGCGTGATGCCTTGAAGCCCAACTCGCCCCTGACCGAGCGGCTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451998.1
CDS-3UTR CCA 90 bp ACTGCAGACACGTGCAGCTGCTCCCGCCTTGTCAGCGGCTGGGTTCTTGAAATCAGTCCTGGGTCAGCGTaGCATCGAACAGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: TADTCSCSRLVSGWVLEISPGSA*HRTACR
Trigger: CCTGCAAGCTGTTCGATGCCACGCTGACCCAGGACT...GATTTCAAGAACCCAGCCGCTGACAAGGCGGGAGCAGCTGCACGTGTCTGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS-3UTR TCA 90 bp CGGCGCTCACAGGACCCGCTCCAGGCTTGTCACAGCCACACATCACAGCACTTTTTGGATCTGCTGCTTTaGGCTTTGACAGGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: RRSQDPLQACHSHTSQHFLDLLL*ALTGSP
Trigger: AGGGCTGCCTGTCAAAGCTCAAAGCAGCAGATCCAA...AAAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGGGTCCTGTGAGCGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR TCA 90 bp CGGCGCTCACAGGACCCGCTCCAGGCTTGTCACAGCCACACATCACAGCACTTTCAGTTTAAGGCCGCGTaGATCAGCAGCTGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: RRSQDPLQACHSHTSQHFQFKAA*ISSWLK
Trigger: CTTCAACCAGCTGCTGATTCACGCGGCCTTAAACTG...AAAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGGGTCCTGTGAGCGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR TCA 90 bp GCTCATCCTTCAGTAGCCAACTCAGAGGTTGCCCCCTCCAGGATGCCTTCCCTAGCAGCTCATGTGCTTTaGAGAGGCTGCTCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: AHPSVANSEVAPSRMPSLAAHVL*RGCSLL
Trigger: GAGGAGCGAGCAGCCTCTTCAAAGCACATGAGCTGC...TAGGGAAGGCATCCTGGAGGGGGCAACCTCTGAGTTGGCTACTGAAGGATGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS-3UTR GCA 90 bp GCAGTAGACACATTCCCCTGGGAAACAGAATTTGCAAGGCAGGTGGAAAGAGCAAGGCTGCGGCCATGTTaGGCCGGGTCGGAGTCCACC +
Preference number: 4 (lower is better)
Translates to: AVDTFPWETEFARQVERARLRPC*AGSEST
Trigger: GGTGGACTCCGACCCGGCGCAACATGGCCGCAGCCT...TGCTCTTTCCACCTGCCTTGCAAATTCTGTTTCCCAGGGGAATGTGTCTACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp CAGCTGAGTCAGCGGCACATTCAGCAGGCGTTCAGTGGGGAAGCAGGAGACAGAACAGGCAGCCCTCGATaGCACCGAGACTCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: QLSQRHIQQAFSGEAGDRTGSPR*HRDSCH
Trigger: ATGACAAGAGTCTCGGTGGCATCGAGGGCTGCCTGT...TCTGTCTCCTGCTTCCCCACTGAACGCCTGCTGAATGTGCCGCTGACTCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp GTCCAGCTTCACGGAGCTTCCAGTGCCAATCAGCACAAGGCCAGTAGCCATGGCACAGGCAGCCCTCGATaGCACCGAGACTCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: VQLHGASSANQHKASSHGTGSPR*HRDSCH
Trigger: ATGACAAGAGTCTCGGTGGCATCGAGGGCTGCCTGT...GCCATGGCTACTGGCCTTGTGCTGATTGGCACTGGAAGCTCCGTGAAGCTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS-3UTR GCA 90 bp CCAAGCCCAGTTGAGTTTAATGCTTCCTCTGCGTTTCCACATCCCACAGAGGGTGCAGACACGTGCAGCTaGTCCCGCCTTGTCAGCGGC +
Preference number: 4 (lower is better)
Translates to: PSPVEFNASSAFPHPTEGADTCS*SRLVSG
Trigger: GCCGCTGACAAGGCGGGAGCAGCTGCACGTGTCTGC...ACCCTCTGTGGGATGTGGAAACGCAGAGGAAGCATTAAACTCAACTGGGCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS-3UTR GCA 90 bp GGAGACAGAGGCGGCGCTCACAGGACCCGCTCCAGGCTTGTCACAGCCACACATCAGAAGGTCTCTGAGTaGTGCATGAATTCCAACCCA +
Preference number: 4 (lower is better)
Translates to: GDRGGAHRTRSRLVTATHQKVSE*CMNSNP
Trigger: TGGGTTGGAATTCATGCAGCACTCAGAGACCTTCTG...ATGTGTGGCTGTGACAAGCCTGGAGCGGGTCCTGTGAGCGCCGCCTCTGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp ACCCGCTCCAGGCTTGTCACAGCCACACATCACAGCACTTTGGGTTTTGCCACAAAGAAGGGTGGTGGATaGAGCAGCAGGGGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: TRSRLVTATHHSTLGFATKKGGG*SSRGLR
Trigger: ACGCAGCCCCCTGCTGCTGCATCCACCACCCTTCTT...TGTGGCAAAACCCAAAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp CGGCGCTCACAGGACCCGCTCCAGGCTTGTCACAGCCACACATCACAGCACTTTCGTTCTTATGGACGCTaGAGGTGCAGTTTAAGGCCG +
Preference number: 4 (lower is better)
Translates to: RRSQDPLQACHSHTSQHFRSYGR*RCSLRP
Trigger: CGGCCTTAAACTGCACCTCCAGCGTCCATAAGAACG...AAAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGGGTCCTGTGAGCGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp GTCAGGGGCGAGTTGGGCTTCAAGGCATCACGCTCCATCAGAAGGCTCCCCTGTCGTTCTTATGGACGCTaGAGGTGCAGTTTAAGGCCG +
Preference number: 4 (lower is better)
Translates to: VRGELGFKASRSIRRLPCRSYGR*RCSLRP
Trigger: CGGCCTTAAACTGCACCTCCAGCGTCCATAAGAACG...ACAGGGGAGCCTTCTGATGGAGCGTGATGCCTTGAAGCCCAACTCGCCCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451998.1
CDS-3UTR CCA 90 bp AAGGCATCACGCTCCATCAGAAGGCTCCCCTGTAATCCCTGCACGATGGAAGGAGCTCACTGCATGAGGTaGACGGTAGCTGCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: KASRSIRRLPCNPCTMEGAHCMR*TVAALR
Trigger: CCGCAAGGCAGCTACCGTCCACCTCATGCAGTGAGC...TCCTTCCATCGTGCAGGGATTACAGGGGAGCCTTCTGATGGAGCGTGATGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451998.1
CDS-3UTR CCA 90 bp GCAGTAGACACATTCCCCTGGGAAACAGAATTTGCAAGGCAGGTGGAAAGAGCACCAAGGGCAGCCTGGTaGGGACGGGGACAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: AVDTFPWETEFARQVERAPRAAW*GRGQAV
Trigger: CACTGCCTGTCCCCGTCCCCACCAGGCTGCCCTTGG...TGCTCTTTCCACCTGCCTTGCAAATTCTGTTTCCCAGGGGAATGTGTCTACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp GCCAATCAGCACAAGGCCAGTAGCCATGGCGTGGCCCATCACAAAGGTTGGATCCACCACTCAGAGTCCTaGGTCAGCGTGGCATCGAAC +
Preference number: 4 (lower is better)
Translates to: ANQHKASSHGVAHHKGWIHHSES*VSVASN
Trigger: GTTCGATGCCACGCTGACCCAGGACTCTGAGTGGTG...GATCCAACCTTTGTGATGGGCCACGCCATGGCTACTGGCCTTGTGCTGATTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS-3UTR TCA 90 bp CGGCGCTCACAGGACCCGCTCCAGGCTTGTCACAGCCACACATCACAGCACTTTCAGCGGCTGGGTTCTTaGAATCTCCACCATTGTCTT +
Preference number: 4 (lower is better)
Translates to: RRSQDPLQACHSHTSQHFQRLGS*NLHHCL
Trigger: AAGACAATGGTGGAGATTTCAAGAACCCAGCCGCTG...AAAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGGGTCCTGTGAGCGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR TCA 90 bp GCCCAGTTGAGTTTAATGCTTCCTCTGCGTTTCCACATCCCACAGAGGGTCCCCTTCATCTCGTGGATGTaGGCGACGGTGTGCACCGAC +
Preference number: 4 (lower is better)
Translates to: AQLSLMLPLRFHIPQRVPFISWM*ATVCTD
Trigger: GTCGGTGCACACCGTCGCTCACATCCACGAGATGAA...GGGGACCCTCTGTGGGATGTGGAAACGCAGAGGAAGCATTAAACTCAACTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS-3UTR GCA 90 bp GGAAAGTTCCCATTGGCAAATGTCTCTACTGCAGACACGTGCAGCTGCTCCCGCTCTACTGCAGACACGTaGAGCTGCTCCCGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: GKFPLANVSTADTCSCSRSTADT*SCSRLV
Trigger: GACAAGGCGGGAGCAGCTGCACGTGTCTGCAGTAGA...GCGGGAGCAGCTGCACGTGTCTGCAGTAGAGACATTTGCCAATGGGAACTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS-3UTR GCA 90 bp ACCCGCTCCAGGCTTGTCACAGCCACACATCACAGCACTTTGGGTTTTGCCACAGTGTGCACCCAGGGATaGCATCAGGAAGTGTGCGTC +
Preference number: 4 (lower is better)
Translates to: TRSRLVTATHHSTLGFATVCTQG*HQEVCV
Trigger: GACGCACACTTCCTGATGGCATCCCTGGGTGCACAC...TGTGGCAAAACCCAAAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp GCAGTAGACACATTCCCCTGGGAAACAGAATTTGCAAGGCAGGTGGAAAGAGCATCTCGGGCCAGGAGGTaGTGGCAGTTCTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: AVDTFPWETEFARQVERASRARR*WQFSPG
Trigger: CCCAGGGGAGAACTGCCAGCACCTCCTGGCCCGAGA...TGCTCTTTCCACCTGCCTTGCAAATTCTGTTTCCCAGGGGAATGTGTCTACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp AAACTGTGGGGACTCAATAGATTTGGAGGCCTCCTCTCCCTTCTGAGAGGCCTGAGGCTTCGTTGCTTGTaGTGGAGAGCGGGAGCCTCG +
Preference number: 4 (lower is better)
Translates to: KLWGLNRFGGLLSLLRGLRLRCL*WRAGAS
Trigger: CGAGGCTCCCGCTCTCCACCACAAGCAACGAAGCCT...CAGGCCTCTCAGAAGGGAGAGGAGGCCTCCAAATCTATTGAGTCCCCACAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp GTCTTCACAGCCAGGTCCAGCTCTTTGTCCAGCTTCACGGAGCTTCCAGTGCCACCAGTAGCCATGGCGTaGCCCATCACAAAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: VFTARSSSLSSFTELPVPPVAMA*PITKVG
Trigger: TCCAACCTTTGTGATGGGCCACGCCATGGCTACTGG...TGGCACTGGAAGCTCCGTGAAGCTGGACAAAGAGCTGGACCTGGCTGTGAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS-3UTR CCA 90 bp TCCTGCTCATCCTTCAGTAGCCAACTCAGAGGTTGCCCCCTCCAGGATGCCTTCCGCCTTGTCAGCGGCTaGGTTCTTGAAATCTCCACC +
Preference number: 4 (lower is better)
Translates to: SCSSFSSQLRGCPLQDAFRLVSG*VLEIST
Trigger: GGTGGAGATTTCAAGAACCCAGCCGCTGACAAGGCG...GAAGGCATCCTGGAGGGGGCAACCTCTGAGTTGGCTACTGAAGGATGAGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS-3UTR CCA 90 bp AAACTGTGGGGACTCAATAGATTTGGAGGCCTCCTCTCCCTTCTGAGAGGCCTGTCAGCAGCTCCTGTGTaGTCTGGGGGTCGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: KLWGLNRFGGLLSLLRGLSAAPV*SGGRVH
Trigger: GTGCACACGACCCCCAGACCACACAGGAGCTGCTGA...CAGGCCTCTCAGAAGGGAGAGGAGGCCTCCAAATCTATTGAGTCCCCACAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp GGCTTCAAGGCATCACGCTCCATCAGAAGGCTCCCCTGTAATCCCTGCACGATGTTGAAGACGTCTCTCTaGGCATTGCTCCCACCGAGC +
Preference number: 4 (lower is better)
Translates to: GFKASRSIRRLPCNPCTMLKTSL*ALLPPS
Trigger: GCTCGGTGGGAGCAATGCCCAGAGAGACGTCTTCAA...CATCGTGCAGGGATTACAGGGGAGCCTTCTGATGGAGCGTGATGCCTTGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451998.1
CDS-3UTR CCA 90 bp CAGAGTCCTGCTCATCCTTCAGTAGCCAACTCAGAGGTTGCCCCCTCCAGGATGAGAGGGTCCCCGTCATaGTGCAGCTCATGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: QSPAHPSVANSEVAPSRMRGSPS*CSSCAL
Trigger: CAAAGCACATGAGCTGCACCATGACGGGGACCCTCT...CATCCTGGAGGGGGCAACCTCTGAGTTGGCTACTGAAGGATGAGCAGGACTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422713.1
3UTR CAA 72 bp ATGGCGTGGCCCATCACAAAGGTTGGATCTGCTGCTTaGAGCTTTGACAGGCAGCCCTCGATGCCACCGAGA +
Preference number: 4 (lower is better)
Translates to: MAWPITKVGSAA*SFDRQPSMPPR
Trigger: TCTCGGTGGCATCGAGGGCTGCCTGTCAAAGCTCAAAGCAGCAGATCCAACCTTTGTGATGGGCCACGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS-3UTR TCA 90 bp TACAAACTGAGGAACTTGAAAAACATCTGTGCACTGGGACCGCCCCTCACAGGAGCCTCCTCTCCCTTCTaGGAGGCCTGCCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: YKLRNLKNICALGPPLTGASSPF*EACLLP
Trigger: AGGAAGCAGGCAGGCCTCTCAGAAGGGAGAGGAGGC...TCCTGTGAGGGGCGGTCCCAGTGCACAGATGTTTTTCAAGTTCCTCAGTTTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR TCA 90 bp GATGAGCCGCTCGGTCAGGGGCGAGTTGGGCTTCAAGGCATCACGCTCCATCAGGTTTACAGTGAACTGTaGTCACACCACTGCATTCCA +
Preference number: 4 (lower is better)
Translates to: DEPLGQGRVGLQGITLHQVYSEL*SHHCIP
Trigger: TGGAATGCAGTGGTGTGATCACAGTTCACTGTAAAC...CTGATGGAGCGTGATGCCTTGAAGCCCAACTCGCCCCTGACCGAGCGGCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451998.1
CDS-3UTR GCA 90 bp ATCACAGAAATTTGCCTGGGCTTGAGCAAACTGTGGGGACTCAATAGATTTGGAGCGCAGAGGCGAGGCTaGGGCCATGTTGCGCCGGGT +
Preference number: 4 (lower is better)
Translates to: ITEICLGLSKLWGLNRFGAQRRG*GHVAPG
Trigger: ACCCGGCGCAACATGGCCGCAGCCTCGCCTCTGCGC...TCCAAATCTATTGAGTCCCCACAGTTTGCTCAAGCCCAGGCAAATTTCTGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp ACCCGCTCCAGGCTTGTCACAGCCACACATCACAGCACTTTGGGTTTTGCCACATCACGGAGCTTCCAGTaGCAATCAGCACAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: TRSRLVTATHHSTLGFATSRSFQ*QSAQGQ
Trigger: CTGGCCTTGTGCTGATTGGCACTGGAAGCTCCGTGA...TGTGGCAAAACCCAAAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp TTCACAGGCTTTCGGAAAGTTCCCATTGGCAAATGTCTCTACTGCAGACACGTGGCAGACACGTGCAGCTaGTCCCGCCTTGTCAGCGGC +
Preference number: 4 (lower is better)
Translates to: FTGFRKVPIGKCLYCRHVADTCS*SRLVSG
Trigger: GCCGCTGACAAGGCGGGAGCAGCTGCACGTGTCTGC...CACGTGTCTGCAGTAGAGACATTTGCCAATGGGAACTTTCCGAAAGCCTGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS-3UTR GCA 90 bp GCCAACATATCAGAGTCCTGCTCATCCTTCAGTAGCCAACTCAGAGGTTGCCCCTCTACTGCAGACACGTaGAGCTGCTCCCGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: ANISESCSSFSSQLRGCPSTADT*SCSRLV
Trigger: GACAAGGCGGGAGCAGCTGCACGTGTCTGCAGTAGA...GGGGCAACCTCTGAGTTGGCTACTGAAGGATGAGCAGGACTCTGATATGTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS-3UTR GCA 90 bp TCCTGCTCATCCTTCAGTAGCCAACTCAGAGGTTGCCCCCTCCAGGATGCCTTCGGTGTGCACCGACCATaGGTCTGTCGGGTTAATAGA +
Preference number: 4 (lower is better)
Translates to: SCSSFSSQLRGCPLQDAFGVHRP*VCRVNR
Trigger: TCTATTAACCCGACAGACGCATGGTCGGTGCACACC...GAAGGCATCCTGGAGGGGGCAACCTCTGAGTTGGCTACTGAAGGATGAGCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS-3UTR GCA 90 bp AGTCCTGCTCATCCTTCAGTAGCCAACTCAGAGGTTGCCCCCTCCAGGATGCCTATGGTGCAGCTCATGTaGTTTGAAGAGGCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: SPAHPSVANSEVAPSRMPMVQLM*FEEAAR
Trigger: GCGAGCAGCCTCTTCAAAGCACATGAGCTGCACCAT...AGGCATCCTGGAGGGGGCAACCTCTGAGTTGGCTACTGAAGGATGAGCAGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS-3UTR CCA 90 bp CTTGTCACAGCCACACATCACAGCACTTTGGGTTTTGCCACAACAGAGCAGCTCGCTCACTGCATGAGGTaGACGGTAGCTGCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: LVTATHHSTLGFATTEQLAHCMR*TVAALR
Trigger: CCGCAAGGCAGCTACCGTCCACCTCATGCAGTGAGC...GAGCTGCTCTGTTGTGGCAAAACCCAAAGTGCTGTGATGTGTGGCTGTGACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp AAACTGTGGGGACTCAATAGATTTGGAGGCCTCCTCTCCCTTCTGAGAGGCCTGTCAGCAGGCGTTCAGTaGGGAAGCAGGAGACAGAGG +
Preference number: 4 (lower is better)
Translates to: KLWGLNRFGGLLSLLRGLSAGVQ*GSRRQR
Trigger: CCTCTGTCTCCTGCTTCCCCACTGAACGCCTGCTGA...CAGGCCTCTCAGAAGGGAGAGGAGGCCTCCAAATCTATTGAGTCCCCACAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR CAA 72 bp ATGTCTCTACTGCAGACACGTGCAGCTGCTCCCGCCTaGTCAGCGGCTGGGTTCTTGAAATCTCCACCATTG +
Preference number: 4 (lower is better)
Translates to: MSLLQTRAAAPA*SAAGFLKSPPL
Trigger: CAATGGTGGAGATTTCAAGAACCCAGCCGCTGACAAGGCGGGAGCAGCTGCACGTGTCTGCAGTAGAGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS-3UTR TCA 90 bp ACCCGCTCCAGGCTTGTCACAGCCACACATCACAGCACTTTGGGTTTTGCCACAGAATCAGCAGCTGGTTaGAGACGTCTCTCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: TRSRLVTATHHSTLGFATESAAG*RRLSGH
Trigger: ATGCCCAGAGAGACGTCTTCAACCAGCTGCTGATTC...TGTGGCAAAACCCAAAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp TTGAGCTTTGACAGGCAGCCCTCGATGCCACCGAGACTCTTGTCATTGGTCCATTCACGGAGCTTCCAGTaGCAATCAGCACAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LSFDRQPSMPPRLLSLVHSRSFQ*QSAQGQ
Trigger: CTGGCCTTGTGCTGATTGGCACTGGAAGCTCCGTGA...ATGGACCAATGACAAGAGTCTCGGTGGCATCGAGGGCTGCCTGTCAAAGCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS-3UTR GCA 90 bp GCCAACATATCAGAGTCCTGCTCATCCTTCAGTAGCCAACTCAGAGGTTGCCCCTCACGGAGCTTCCAGTaGCAATCAGCACAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: ANISESCSSFSSQLRGCPSRSFQ*QSAQGQ
Trigger: CTGGCCTTGTGCTGATTGGCACTGGAAGCTCCGTGA...GGGGCAACCTCTGAGTTGGCTACTGAAGGATGAGCAGGACTCTGATATGTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS-3UTR GCA 90 bp ACCCGCTCCAGGCTTGTCACAGCCACACATCACAGCACTTTGGGTTTTGCCACAGGCAAATGTCTCTACTaGAGACACGTGCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: TRSRLVTATHHSTLGFATGKCLY*RHVQLL
Trigger: GAGCAGCTGCACGTGTCTGCAGTAGAGACATTTGCC...TGTGGCAAAACCCAAAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp CTTCACAGCCAGGTCCAGCTCTTTGTCCAGCTTCACGGAGCTTCCAGTGCCAATGGCAAATGTCTCTACTaGAGACACGTGCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LHSQVQLFVQLHGASSANGKCLY*RHVQLL
Trigger: GAGCAGCTGCACGTGTCTGCAGTAGAGACATTTGCC...ATTGGCACTGGAAGCTCCGTGAAGCTGGACAAAGAGCTGGACCTGGCTGTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS-3UTR GCA 90 bp GGAGACAGAGGCGGCGCTCACAGGACCCGCTCCAGGCTTGTCACAGCCACACATAGCCAAAAGAGTAGATaGCTTTCACATAGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: GDRGGAHRTRSRLVTATHSQKSR*LSHSCL
Trigger: TAAGCAGCTATGTGAAAGGCATCTACTCTTTTGGCT...ATGTGTGGCTGTGACAAGCCTGGAGCGGGTCCTGTGAGCGCCGCCTCTGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp AACCCGGTGGAGCAGCTGACTGGACGCAGTGACGCCACCACTGAGGTTCTGCAGTCTGAGCTCAATCCTTaGACCTCAGAAGTGCATTTA +
Preference number: 4 (lower is better)
Translates to: NPVEQLTGRSDATTEVLQSELNP*TSEVHL
Trigger: TAAATGCACTTCTGAGGTGCAAGGATTGAGCTCAGA...CTGCAGAACCTCAGTGGTGGCGTCACTGCGTCCAGTCAGCTGCTCCACCGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp AACCCGGTGGAGCAGCTGACTGGACGCAGTGACGCCACCACTGAGGTTCTGCAGCGAGACTCTTGTCATTaGTCCATTTTACATACTGGG +
Preference number: 4 (lower is better)
Translates to: NPVEQLTGRSDATTEVLQRDSCH*SILHTG
Trigger: CCCAGTATGTAAAATGGACCAATGACAAGAGTCTCG...CTGCAGAACCTCAGTGGTGGCGTCACTGCGTCCAGTCAGCTGCTCCACCGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp TACAAACTGAGGAACTTGAAAAACATCTGTGCACTGGGACCGCCCCTCACAGGAGCAGGCGGTAGAGCATaGAGCAGCTGTCCACCACGT +
Preference number: 4 (lower is better)
Translates to: YKLRNLKNICALGPPLTGAGGRA*SSCPPR
Trigger: ACGTGGTGGACAGCTGCTCCATGCTCTACCGCCTGC...TCCTGTGAGGGGCGGTCCCAGTGCACAGATGTTTTTCAAGTTCCTCAGTTTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR TCA 90 bp TTGAGCTTTGACAGGCAGCCCTCGATGCCACCGAGACTCTTGTCATTGGTCCATTTGGATCTGCTGCTTTaGGCTTTGACAGGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: LSFDRQPSMPPRLLSLVHLDLLL*ALTGSP
Trigger: AGGGCTGCCTGTCAAAGCTCAAAGCAGCAGATCCAA...ATGGACCAATGACAAGAGTCTCGGTGGCATCGAGGGCTGCCTGTCAAAGCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS-3UTR TCA 90 bp GCTGCTCCCGCCTTGTCAGCGGCTGGGTTCTTGAAATCTCCACCATTGTCTTCACAGCGGCTGGGTTCTTaGAATCTCCACCATTGTCTT +
Preference number: 4 (lower is better)
Translates to: AAPALSAAGFLKSPPLSSQRLGS*NLHHCL
Trigger: AAGACAATGGTGGAGATTTCAAGAACCCAGCCGCTG...TGAAGACAATGGTGGAGATTTCAAGAACCCAGCCGCTGACAAGGCGGGAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS-3UTR TCA 90 bp ATCACAGAAATTTGCCTGGGCTTGAGCAAACTGTGGGGACTCAATAGATTTGGAACCCGGTGGAGCAGCTaGCTGGACGCAGTGACGCCA +
Preference number: 4 (lower is better)
Translates to: ITEICLGLSKLWGLNRFGTRWSS*LDAVTP
Trigger: TGGCGTCACTGCGTCCAGTCAGCTGCTCCACCGGGT...TCCAAATCTATTGAGTCCCCACAGTTTGCTCAAGCCCAGGCAAATTTCTGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR TCA 90 bp CAGCTGAGTCAGCGGCACATTCAGCAGGCGTTCAGTGGGGAAGCAGGAGACAGAAAATCATGCTCGACATaGAGCCCTGTTATGATGTGC +
Preference number: 4 (lower is better)
Translates to: QLSQRHIQQAFSGEAGDRKSCST*SPVMMC
Trigger: GCACATCATAACAGGGCTTCATGTCGAGCATGATTT...TCTGTCTCCTGCTTCCCCACTGAACGCCTGCTGAATGTGCCGCTGACTCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp CAGCTGAGTCAGCGGCACATTCAGCAGGCGTTCAGTGGGGAAGCAGGAGACAGATTTGGCGAGTTTTTCTaGCTGGTCGTAGAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: QLSQRHIQQAFSGEAGDRFGEFF*LVVEVG
Trigger: ACCAACTTCTACGACCAGGCAGAAAAACTCGCCAAA...TCTGTCTCCTGCTTCCCCACTGAACGCCTGCTGAATGTGCCGCTGACTCAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp AGTCCTGCTCATCCTTCAGTAGCCAACTCAGAGGTTGCCCCCTCCAGGATGCCTCCCATCCTTGATCTCTaGTTTCATCTCGTGGATGTG +
Preference number: 4 (lower is better)
Translates to: SPAHPSVANSEVAPSRMPPILDL*FHLVDV
Trigger: CACATCCACGAGATGAAAGCAGAGATCAAGGATGGG...AGGCATCCTGGAGGGGGCAACCTCTGAGTTGGCTACTGAAGGATGAGCAGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS-3UTR GCA 90 bp TTTTGCCACAACAGAGCAGCTCTGAGCTCAATCCTTGCACCTCAGAAGTGCATTGCCAGGCTGGCTCACTaGATGAGGTGGACGGTAGCT +
Preference number: 4 (lower is better)
Translates to: FCHNRAALSSILAPQKCIARLAH*MRWTVA
Trigger: AGCTACCGTCCACCTCATGCAGTGAGCCAGCCTGGC...AATGCACTTCTGAGGTGCAAGGATTGAGCTCAGAGCTGCTCTGTTGTGGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp ATCACAGAAATTTGCCTGGGCTTGAGCAAACTGTGGGGACTCAATAGATTTGGACCACCACTGAGGTTCTaGAGGGTGGAGGCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ITEICLGLSKLWGLNRFGPPLRF*RVEAAR
Trigger: CCTGGCCGCCTCCACCCTGCAGAACCTCAGTGGTGG...TCCAAATCTATTGAGTCCCCACAGTTTGCTCAAGCCCAGGCAAATTTCTGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp AAACTGTGGGGACTCAATAGATTTGGAGGCCTCCTCTCCCTTCTGAGAGGCCTGCTTGAAAAACATCTGTaGACTGGGACCGCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: KLWGLNRFGGLLSLLRGLLEKHL*TGTAPH
Trigger: GTGAGGGGCGGTCCCAGTGCACAGATGTTTTTCAAG...CAGGCCTCTCAGAAGGGAGAGGAGGCCTCCAAATCTATTGAGTCCCCACAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp AACATATCAGAGTCCTGCTCATCCTTCAGTAGCCAACTCAGAGGTTGCCCCCTCGGGTCCCCGTCATGGTaGAGCTCATGTGCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: NISESCSSFSSQLRGCPLGSPSW*SSCALK
Trigger: CTTCAAAGCACATGAGCTGCACCATGACGGGGACCC...GAGGGGGCAACCTCTGAGTTGGCTACTGAAGGATGAGCAGGACTCTGATATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS-3UTR CCA 90 bp GCAGTAGACACATTCCCCTGGGAAACAGAATTTGCAAGGCAGGTGGAAAGAGCACTTCGTTGCTTGTGGTaGAGAGCGGGAGCCTCGCAT +
Preference number: 4 (lower is better)
Translates to: AVDTFPWETEFARQVERALRCLW*RAGASH
Trigger: ATGCGAGGCTCCCGCTCTCCACCACAAGCAACGAAG...TGCTCTTTCCACCTGCCTTGCAAATTCTGTTTCCCAGGGGAATGTGTCTACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp ATTTTACATAAGATTCATCCCAGGACAGGATCCCACGTCCTAAGCAGCCGAGCCCTTCGTTGCTTGTGGTaGAGAGCGGGAGCCTCGCAT +
Preference number: 4 (lower is better)
Translates to: ILHKIHPRTGSHVLSSRALRCLW*RAGASH
Trigger: ATGCGAGGCTCCCGCTCTCCACCACAAGCAACGAAG...GGCTCGGCTGCTTAGGACGTGGGATCCTGTCCTGGGATGAATCTTATGTAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS-3UTR CCA 90 bp CTTGTCACAGCCACACATCACAGCACTTTGGGTTTTGCCACAACAGAGCAGCTCCATACTGGGTCAGCGTaGCATCGAACAGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LVTATHHSTLGFATTEQLHTGSA*HRTACR
Trigger: CCTGCAAGCTGTTCGATGCCACGCTGACCCAGTATG...GAGCTGCTCTGTTGTGGCAAAACCCAAAGTGCTGTGATGTGTGGCTGTGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp TCCTGCTCATCCTTCAGTAGCCAACTCAGAGGTTGCCCCCTCCAGGATGCCTTCGCCCATCACAAAGGTTaGATCTGCTGCTTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: SCSSFSSQLRGCPLQDAFAHHKG*ICCFEL
Trigger: AAGCTCAAAGCAGCAGATCCAACCTTTGTGATGGGC...GAAGGCATCCTGGAGGGGGCAACCTCTGAGTTGGCTACTGAAGGATGAGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS-3UTR CCA 90 bp AACATATCAGAGTCCTGCTCATCCTTCAGTAGCCAACTCAGAGGTTGCCCCCTCCCAGTAGCCATGGCGTaGCCCATCACAAAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: NISESCSSFSSQLRGCPLPVAMA*PITKVG
Trigger: TCCAACCTTTGTGATGGGCCACGCCATGGCTACTGG...GAGGGGGCAACCTCTGAGTTGGCTACTGAAGGATGAGCAGGACTCTGATATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS-3UTR CCA 90 bp ATCACAGAAATTTGCCTGGGCTTGAGCAAACTGTGGGGACTCAATAGATTTGGACGGGCCAGGAGGTGCTaGCAGTTCTCCCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: ITEICLGLSKLWGLNRFGRARRC*QFSPGD
Trigger: ATCCCCAGGGGAGAACTGCCAGCACCTCCTGGCCCG...TCCAAATCTATTGAGTCCCCACAGTTTGCTCAAGCCCAGGCAAATTTCTGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp CAGCTGAGTCAGCGGCACATTCAGCAGGCGTTCAGTGGGGAAGCAGGAGACAGAGTAGACACATTCCCCTaGGAAACAGAATTTGCAAGG +
Preference number: 4 (lower is better)
Translates to: QLSQRHIQQAFSGEAGDRVDTFP*ETEFAR
Trigger: CCTTGCAAATTCTGTTTCCCAGGGGAATGTGTCTAC...TCTGTCTCCTGCTTCCCCACTGAACGCCTGCTGAATGTGCCGCTGACTCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp CAGCTGAGTCAGCGGCACATTCAGCAGGCGTTCAGTGGGGAAGCAGGAGACAGACCCTCACCTGAAAAATaGGACAGCAACACAATGAGA +
Preference number: 4 (lower is better)
Translates to: QLSQRHIQQAFSGEAGDRPSPEK*DSNTMR
Trigger: TCTCATTGTGTTGCTGTCCCATTTTTCAGGTGAGGG...TCTGTCTCCTGCTTCCCCACTGAACGCCTGCTGAATGTGCCGCTGACTCAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR CAA 72 bp GGCTTGTCACAGCCACACATCACAGCACTTTGGGTTTaGCCACAACAGAGCAGCTCTGAGCTCAATCCTTGC +
Preference number: 4 (lower is better)
Translates to: GLSQPHITALWV*PQQSSSELNPC
Trigger: GCAAGGATTGAGCTCAGAGCTGCTCTGTTGTGGCAAAACCCAAAGTGCTGTGATGTGTGGCTGTGACAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR TCA 90 bp TTGAGTTTAATGCTTCCTCTGCGTTTCCACATCCCACAGAGGGTCCCCGTCATGTTGGATCTGCTGCTTTaGGCTTTGACAGGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: LSLMLPLRFHIPQRVPVMLDLLL*ALTGSP
Trigger: AGGGCTGCCTGTCAAAGCTCAAAGCAGCAGATCCAA...CATGACGGGGACCCTCTGTGGGATGTGGAAACGCAGAGGAAGCATTAAACTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS-3UTR TCA 90 bp CTTGTCACAGCCACACATCACAGCACTTTGGGTTTTGCCACAACAGAGCAGCTCGGAAGTGTGCGTCATTaGACAGCAGGATGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: LVTATHHSTLGFATTEQLGSVRH*TAGCGL
Trigger: GAGACCACATCCTGCTGTTCAATGACGCACACTTCC...GAGCTGCTCTGTTGTGGCAAAACCCAAAGTGCTGTGATGTGTGGCTGTGACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp AACATATCAGAGTCCTGCTCATCCTTCAGTAGCCAACTCAGAGGTTGCCCCCTCGGCAAATGTCTCTACTaGAGACACGTGCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: NISESCSSFSSQLRGCPLGKCLY*RHVQLL
Trigger: GAGCAGCTGCACGTGTCTGCAGTAGAGACATTTGCC...GAGGGGGCAACCTCTGAGTTGGCTACTGAAGGATGAGCAGGACTCTGATATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS-3UTR GCA 90 bp ACCCGCTCCAGGCTTGTCACAGCCACACATCACAGCACTTTGGGTTTTGCCACACTGGGAAACAGAATTTaGAAGGCAGGTGGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: TRSRLVTATHHSTLGFATLGNRI*KAGGKS
Trigger: GCTCTTTCCACCTGCCTTGCAAATTCTGTTTCCCAG...TGTGGCAAAACCCAAAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp TACAAACTGAGGAACTTGAAAAACATCTGTGCACTGGGACCGCCCCTCACAGGACGCCTTGTCAGCGGCTaGGTTCTTGAAATCTCCACC +
Preference number: 4 (lower is better)
Translates to: YKLRNLKNICALGPPLTGRLVSG*VLEIST
Trigger: GGTGGAGATTTCAAGAACCCAGCCGCTGACAAGGCG...TCCTGTGAGGGGCGGTCCCAGTGCACAGATGTTTTTCAAGTTCCTCAGTTTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp GCCAACATATCAGAGTCCTGCTCATCCTTCAGTAGCCAACTCAGAGGTTGCCCCTCTGTCGGGTGGTCCTaGAGAATCTGTTCCCATAGT +
Preference number: 4 (lower is better)
Translates to: ANISESCSSFSSQLRGCPSVGWS*RICSHS
Trigger: ACTATGGGAACAGATTCTCCAGGACCACCCGACAGA...GGGGCAACCTCTGAGTTGGCTACTGAAGGATGAGCAGGACTCTGATATGTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS-3UTR CCA 90 bp CCCCCAAGCCCAGTTGAGTTTAATGCTTCCTCTGCGTTTCCACATCCCACAGAGAACATGTCTGTCGGGTaGTCCTGGAGAATCTGTTCC +
Preference number: 4 (lower is better)
Translates to: PPSPVEFNASSAFPHPTENMSVG*SWRICS
Trigger: GGAACAGATTCTCCAGGACCACCCGACAGACATGTT...CTCTGTGGGATGTGGAAACGCAGAGGAAGCATTAAACTCAACTGGGCTTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS-3UTR CCA 90 bp TCCTGCTCATCCTTCAGTAGCCAACTCAGAGGTTGCCCCCTCCAGGATGCCTTCCCTGGTCGTAGAAGTTaGTTTCCATCAAGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: SCSSFSSQLRGCPLQDAFPGRRS*FPSSQK
Trigger: CTTTTGGCTTGATGGAAACCAACTTCTACGACCAGG...GAAGGCATCCTGGAGGGGGCAACCTCTGAGTTGGCTACTGAAGGATGAGCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS-3UTR CCA 90 bp GCAGTAGACACATTCCCCTGGGAAACAGAATTTGCAAGGCAGGTGGAAAGAGCATTGAAGACGTCTCTCTaGGCATTGCTCCCACCGAGC +
Preference number: 4 (lower is better)
Translates to: AVDTFPWETEFARQVERALKTSL*ALLPPS
Trigger: GCTCGGTGGGAGCAATGCCCAGAGAGACGTCTTCAA...TGCTCTTTCCACCTGCCTTGCAAATTCTGTTTCCCAGGGGAATGTGTCTACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR TCA 90 bp CTTGTCACAGCCACACATCACAGCACTTTGGGTTTTGCCACAACAGAGCAGCTCACTGGCTGTGACTGCTaGAAAATGCTCATTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LVTATHHSTLGFATTEQLTGCDC*KMLIGP
Trigger: AGGGCCAATGAGCATTTTTCAGCAGTCACAGCCAGT...GAGCTGCTCTGTTGTGGCAAAACCCAAAGTGCTGTGATGTGTGGCTGTGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp AAAATGCTCATTGGCCCTTCTCGAGGACTGAAAGGAGATTCGGAATCACATTTAATGTGGTCTCGGCTGTaGTTCCGGGCCACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: KMLIGPSRGLKGDSESHLMWSRL*FRATGR
Trigger: CCTGCCTGTGGCCCGGAAGCACAGCCGAGACCACAT...TAAATGTGATTCCGAATCTCCTTTCAGTCCTCGAGAAGGGCCAATGAGCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp TACAAACTGAGGAACTTGAAAAACATCTGTGCACTGGGACCGCCCCTCACAGGATATGGACGCTGGAGGTaGAGTTTAAGGCCGCGTGAA +
Preference number: 4 (lower is better)
Translates to: YKLRNLKNICALGPPLTGYGRWR*SLRPRE
Trigger: TTCACGCGGCCTTAAACTGCACCTCCAGCGTCCATA...TCCTGTGAGGGGCGGTCCCAGTGCACAGATGTTTTTCAAGTTCCTCAGTTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp CTGAAAGGAGATTCGGAATCACATTTAAAATTAACCCGTGACCCACTTCCTGTAGCATCCTTCCAGGCCTaGCAGTCGCGCAGAGGCGAG +
Preference number: 4 (lower is better)
Translates to: LKGDSESHLKLTRDPLPVASFQA*QSRRGE
Trigger: CTCGCCTCTGCGCGACTGCCAGGCCTGGAAGGATGC...TACAGGAAGTGGGTCACGGGTTAATTTTAAATGTGATTCCGAATCTCCTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp TACAAACTGAGGAACTTGAAAAACATCTGTGCACTGGGACCGCCCCTCACAGGACTAACAAACAGGCTCTaGCCGTCTCCTGACCCTAAC +
Preference number: 4 (lower is better)
Translates to: YKLRNLKNICALGPPLTGLTNRL*PSPDPN
Trigger: GTTAGGGTCAGGAGACGGCCAGAGCCTGTTTGTTAG...TCCTGTGAGGGGCGGTCCCAGTGCACAGATGTTTTTCAAGTTCCTCAGTTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp ACCCGCTCCAGGCTTGTCACAGCCACACATCACAGCACTTTGGGTTTTGCCACACTGAAAAATGCTCATTaGCCCTTCTCGAGGACTGAA +
Preference number: 4 (lower is better)
Translates to: TRSRLVTATHHSTLGFATLKNAH*PFSRTE
Trigger: TTCAGTCCTCGAGAAGGGCCAATGAGCATTTTTCAG...TGTGGCAAAACCCAAAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp CTGAAAGGAGATTCGGAATCACATTTAAAATTAACCCGTGACCCACTTCCTGTAATCCCAAGGGCAGCCTaGTGGGGACGGGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: LKGDSESHLKLTRDPLPVIPRAA*WGRGQA
Trigger: TGCCTGTCCCCGTCCCCACCAGGCTGCCCTTGGGAT...TACAGGAAGTGGGTCACGGGTTAATTTTAAATGTGATTCCGAATCTCCTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR TCA 90 bp GTTGAGTTTAATGCTTCCTCTGCGTTTCCACATCCCACAGAGGGTCCCCGTCATCTTCCAGAAGGTCTCTaGGTGCTGCATGAATTCCAA +
Preference number: 4 (lower is better)
Translates to: VEFNASSAFPHPTEGPRHLPEGL*VLHEFQ
Trigger: TTGGAATTCATGCAGCACTCAGAGACCTTCTGGAAG...ATGACGGGGACCCTCTGTGGGATGTGGAAACGCAGAGGAAGCATTAAACTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS-3UTR GCA 90 bp CTTGTCACAGCCACACATCACAGCACTTTGGGTTTTGCCACAACAGAGCAGCTCCCCATCCTTGATCTCTaGTTTCATCTCGTGGATGTG +
Preference number: 4 (lower is better)
Translates to: LVTATHHSTLGFATTEQLPILDL*FHLVDV
Trigger: CACATCCACGAGATGAAAGCAGAGATCAAGGATGGG...GAGCTGCTCTGTTGTGGCAAAACCCAAAGTGCTGTGATGTGTGGCTGTGACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp GTTGAGTTTAATGCTTCCTCTGCGTTTCCACATCCCACAGAGGGTCCCCGTCATCAGAAGGTCTCTGAGTaGTGCATGAATTCCAACCCA +
Preference number: 4 (lower is better)
Translates to: VEFNASSAFPHPTEGPRHQKVSE*CMNSNP
Trigger: TGGGTTGGAATTCATGCAGCACTCAGAGACCTTCTG...ATGACGGGGACCCTCTGTGGGATGTGGAAACGCAGAGGAAGCATTAAACTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS-3UTR CCA 90 bp AAACTGTGGGGACTCAATAGATTTGGAGGCCTCCTCTCCCTTCTGAGAGGCCTGTCGGAAAGTTCCCATTaGCAAATGTCTCTACTGCAG +
Preference number: 4 (lower is better)
Translates to: KLWGLNRFGGLLSLLRGLSESSH*QMSLLQ
Trigger: CTGCAGTAGAGACATTTGCCAATGGGAACTTTCCGA...CAGGCCTCTCAGAAGGGAGAGGAGGCCTCCAAATCTATTGAGTCCCCACAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp CAATCCTTGCACCTCAGAAGTGCATTTATGATTAAAATCATGCTCGACATGAAGTGGCGTCCCGCAGGGTaGTCAGCAGCTCCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: QSLHLRSAFMIKIMLDMKWRPAG*SAAPVW
Trigger: CCACACAGGAGCTGCTGACCACCCTGCGGGACGCCA...CTTCATGTCGAGCATGATTTTAATCATAAATGCACTTCTGAGGTGCAAGGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp AAAATGCTCATTGGCCCTTCTCGAGGACTGAAAGGAGATTCGGAATCACATTTACGGTCAGGGGCGAGTTaGGCTTCAAGGCATCACGCT +
Preference number: 4 (lower is better)
Translates to: KMLIGPSRGLKGDSESHLRSGAS*ASRHHA
Trigger: AGCGTGATGCCTTGAAGCCCAACTCGCCCCTGACCG...TAAATGTGATTCCGAATCTCCTTTCAGTCCTCGAGAAGGGCCAATGAGCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR TCA 90 bp TACAAACTGAGGAACTTGAAAAACATCTGTGCACTGGGACCGCCCCTCACAGGAGGGACAGCAACACAATaGGACAACAGAGACTGTCTA +
Preference number: 4 (lower is better)
Translates to: YKLRNLKNICALGPPLTGGTATQ*DNRDCL
Trigger: TAGACAGTCTCTGTTGTCTCATTGTGTTGCTGTCCC...TCCTGTGAGGGGCGGTCCCAGTGCACAGATGTTTTTCAAGTTCCTCAGTTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR TCA 90 bp ATCACAGAAATTTGCCTGGGCTTGAGCAAACTGTGGGGACTCAATAGATTTGGACCCGGTACCCTCACCTaGAAAATGGGACAGCAACAC +
Preference number: 4 (lower is better)
Translates to: ITEICLGLSKLWGLNRFGPGTLT*KMGQQH
Trigger: GTGTTGCTGTCCCATTTTTCAGGTGAGGGTACCGGG...TCCAAATCTATTGAGTCCCCACAGTTTGCTCAAGCCCAGGCAAATTTCTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR TCA 90 bp TTTTGCCACAACAGAGCAGCTCTGAGCTCAATCCTTGCACCTCAGAAGTGCATTAAATTTGCCTGGGCTTaGGCAAACTGTGGGGACTCA +
Preference number: 4 (lower is better)
Translates to: FCHNRAALSSILAPQKCIKFAWA*ANCGDS
Trigger: TGAGTCCCCACAGTTTGCTCAAGCCCAGGCAAATTT...AATGCACTTCTGAGGTGCAAGGATTGAGCTCAGAGCTGCTCTGTTGTGGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp TTGAGTTTAATGCTTCCTCTGCGTTTCCACATCCCACAGAGGGTCCCCGTCATGTTTGGCGAGTTTTTCTaGCTGGTCGTAGAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: LSLMLPLRFHIPQRVPVMFGEFF*LVVEVG
Trigger: ACCAACTTCTACGACCAGGCAGAAAAACTCGCCAAA...CATGACGGGGACCCTCTGTGGGATGTGGAAACGCAGAGGAAGCATTAAACTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS-3UTR GCA 90 bp TACAAACTGAGGAACTTGAAAAACATCTGTGCACTGGGACCGCCCCTCACAGGATGCCATCAGGAAGTGTaGGTCATTGAACAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: YKLRNLKNICALGPPLTGCHQEV*VIEQQD
Trigger: ATCCTGCTGTTCAATGACGCACACTTCCTGATGGCA...TCCTGTGAGGGGCGGTCCCAGTGCACAGATGTTTTTCAAGTTCCTCAGTTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp TACAAACTGAGGAACTTGAAAAACATCTGTGCACTGGGACCGCCCCTCACAGGAGCCCATCACAAAGGTTaGATCTGCTGCTTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: YKLRNLKNICALGPPLTGAHHKG*ICCFEL
Trigger: AAGCTCAAAGCAGCAGATCCAACCTTTGTGATGGGC...TCCTGTGAGGGGCGGTCCCAGTGCACAGATGTTTTTCAAGTTCCTCAGTTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp TTTGACAGGCAGCCCTCGATGCCACCGAGACTCTTGTCATTGGTCCATTTTACAGCCCATCACAAAGGTTaGATCTGCTGCTTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: FDRQPSMPPRLLSLVHFTAHHKG*ICCFEL
Trigger: AAGCTCAAAGCAGCAGATCCAACCTTTGTGATGGGC...TGTAAAATGGACCAATGACAAGAGTCTCGGTGGCATCGAGGGCTGCCTGTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS-3UTR CCA 90 bp CAGGCTTTCGGAAAGTTCCCATTGGCAAATGTCTCTACTGCAGACACGTGCAGCTCGGAAAGTTCCCATTaGCAAATGTCTCTACTGCAG +
Preference number: 4 (lower is better)
Translates to: QAFGKFPLANVSTADTCSSESSH*QMSLLQ
Trigger: CTGCAGTAGAGACATTTGCCAATGGGAACTTTCCGA...GCTGCACGTGTCTGCAGTAGAGACATTTGCCAATGGGAACTTTCCGAAAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS-3UTR CCA 90 bp AACATATCAGAGTCCTGCTCATCCTTCAGTAGCCAACTCAGAGGTTGCCCCCTCTCGGAAAGTTCCCATTaGCAAATGTCTCTACTGCAG +
Preference number: 4 (lower is better)
Translates to: NISESCSSFSSQLRGCPLSESSH*QMSLLQ
Trigger: CTGCAGTAGAGACATTTGCCAATGGGAACTTTCCGA...GAGGGGGCAACCTCTGAGTTGGCTACTGAAGGATGAGCAGGACTCTGATATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS-3UTR CCA 90 bp ATCACAGAAATTTGCCTGGGCTTGAGCAAACTGTGGGGACTCAATAGATTTGGAAAAACATCTGTGCACTaGGACCGCCCCTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: ITEICLGLSKLWGLNRFGKTSVH*DRPSQE
Trigger: CTCCTGTGAGGGGCGGTCCCAGTGCACAGATGTTTT...TCCAAATCTATTGAGTCCCCACAGTTTGCTCAAGCCCAGGCAAATTTCTGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR TCA 90 bp TTTTGCCACAACAGAGCAGCTCTGAGCTCAATCCTTGCACCTCAGAAGTGCATTCTTCCAGAAGGTCTCTaGGTGCTGCATGAATTCCAA +
Preference number: 4 (lower is better)
Translates to: FCHNRAALSSILAPQKCILPEGL*VLHEFQ
Trigger: TTGGAATTCATGCAGCACTCAGAGACCTTCTGGAAG...AATGCACTTCTGAGGTGCAAGGATTGAGCTCAGAGCTGCTCTGTTGTGGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp GCCAACATATCAGAGTCCTGCTCATCCTTCAGTAGCCAACTCAGAGGTTGCCCCAGCCAAAAGAGTAGATaGCTTTCACATAGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: ANISESCSSFSSQLRGCPSQKSR*LSHSCL
Trigger: TAAGCAGCTATGTGAAAGGCATCTACTCTTTTGGCT...GGGGCAACCTCTGAGTTGGCTACTGAAGGATGAGCAGGACTCTGATATGTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS-3UTR GCA 90 bp CCAAGCCCAGTTGAGTTTAATGCTTCCTCTGCGTTTCCACATCCCACAGAGGGTAACATATCAGAGTCCTaGTCATCCTTCAGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: PSPVEFNASSAFPHPTEGNISES*SSFSSQ
Trigger: TTGGCTACTGAAGGATGAGCAGGACTCTGATATGTT...ACCCTCTGTGGGATGTGGAAACGCAGAGGAAGCATTAAACTCAACTGGGCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS-3UTR CCA 90 bp ACGTGCAGCTGCTCCCGCCTTGTCAGCGGCTGGGTTCTTGAAATCTCCACCATTCGAGACTCTTGTCATTaGTCCATTTTACATAAGATT +
Preference number: 4 (lower is better)
Translates to: TCSCSRLVSGWVLEISTIRDSCH*SILHKI
Trigger: AATCTTATGTAAAATGGACCAATGACAAGAGTCTCG...AATGGTGGAGATTTCAAGAACCCAGCCGCTGACAAGGCGGGAGCAGCTGCACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS-3UTR TCA 90 bp TCCTGCCCTGATGAATCCCTAATTTCAGTACAAACTGAGGAACTTGAAAAACATTTCATCTCGTGGATGTaGGCGACGGTGTGCACCGAC +
Preference number: 4 (lower is better)
Translates to: SCPDESLISVQTEELEKHFISWM*ATVCTD
Trigger: GTCGGTGCACACCGTCGCTCACATCCACGAGATGAA...ATGTTTTTCAAGTTCCTCAGTTTGTACTGAAATTAGGGATTCATCAGGGCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR TCA 90 bp CAATCCTTGCACCTCAGAAGTGCATTTATGATTAAAATCATGCTCGACATGAAGACCCCATGTGCGCGCTaGTCTGTAAGAAGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: QSLHLRSAFMIKIMLDMKTPCAR*SVRRVV
Trigger: CACCACCCTTCTTACAGATCAGCGCGCACATGGGGT...CTTCATGTCGAGCATGATTTTAATCATAAATGCACTTCTGAGGTGCAAGGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp CAATCCTTGCACCTCAGAAGTGCATTTATGATTAAAATCATGCTCGACATGAAGCACCACGTCCAGCATTaGATCGTTGGCCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: QSLHLRSAFMIKIMLDMKHHVQH*IVGLQA
Trigger: AGCCTGCAGGCCAACGATGCAATGCTGGACGTGGTG...CTTCATGTCGAGCATGATTTTAATCATAAATGCACTTCTGAGGTGCAAGGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp AAAATGCTCATTGGCCCTTCTCGAGGACTGAAAGGAGATTCGGAATCACATTTACAGAAGGACCCCATGTaGGCGCTGATCTGTAAGAAG +
Preference number: 4 (lower is better)
Translates to: KMLIGPSRGLKGDSESHLQKDPM*ALICKK
Trigger: CTTCTTACAGATCAGCGCGCACATGGGGTCCTTCTG...TAAATGTGATTCCGAATCTCCTTTCAGTCCTCGAGAAGGGCCAATGAGCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp ATCACAGAAATTTGCCTGGGCTTGAGCAAACTGTGGGGACTCAATAGATTTGGACAGCACTTTGGGTTTTaGCACAACAGAGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: ITEICLGLSKLWGLNRFGQHFGF*HNRAAL
Trigger: CAGAGCTGCTCTGTTGTGGCAAAACCCAAAGTGCTG...TCCAAATCTATTGAGTCCCCACAGTTTGCTCAAGCCCAGGCAAATTTCTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp AAAATGCTCATTGGCCCTTCTCGAGGACTGAAAGGAGATTCGGAATCACATTTAGGCCTGCCTGCTTCCTaGCCTGATGAATCCCTAATT +
Preference number: 4 (lower is better)
Translates to: KMLIGPSRGLKGDSESHLGLPAS*PDESLI
Trigger: AATTAGGGATTCATCAGGGCAGGAAGCAGGCAGGCC...TAAATGTGATTCCGAATCTCCTTTCAGTCCTCGAGAAGGGCCAATGAGCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp CTTGTCACAGCCACACATCACAGCACTTTGGGTTTTGCCACAACAGAGCAGCTCTTAATCACAGAAATTTaGCTGGGCTTGAGCAAACTG +
Preference number: 4 (lower is better)
Translates to: LVTATHHSTLGFATTEQLLITEI*LGLSKL
Trigger: CAGTTTGCTCAAGCCCAGGCAAATTTCTGTGATTAA...GAGCTGCTCTGTTGTGGCAAAACCCAAAGTGCTGTGATGTGTGGCTGTGACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp TTTTGCCACAACAGAGCAGCTCTGAGCTCAATCCTTGCACCTCAGAAGTGCATTCCTGGTCGTAGAAGTTaGTTTCCATCAAGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: FCHNRAALSSILAPQKCIPGRRS*FPSSQK
Trigger: CTTTTGGCTTGATGGAAACCAACTTCTACGACCAGG...AATGCACTTCTGAGGTGCAAGGATTGAGCTCAGAGCTGCTCTGTTGTGGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR TCA 90 bp CTTGTCACAGCCACACATCACAGCACTTTGGGTTTTGCCACAACAGAGCAGCTCTTTAAAATTAACCCGTaGCCCACTTCCTGTAAAACT +
Preference number: 4 (lower is better)
Translates to: LVTATHHSTLGFATTEQLFKINP*PTSCKT
Trigger: AGTTTTACAGGAAGTGGGTCACGGGTTAATTTTAAA...GAGCTGCTCTGTTGTGGCAAAACCCAAAGTGCTGTGATGTGTGGCTGTGACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp ATAAAGCCCAGTGCCAATAGTTATGACAAGCCAACATATCAGAGTCCTGCTCATTGCCTTTCACATAGCTaGTTAGGGGGATGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: IKPSANSYDKPTYQSPAHCLSHS*LGGCQV
Trigger: CACCTGACATCCCCCTAAGCAGCTATGTGAAAGGCA...ATGAGCAGGACTCTGATATGTTGGCTTGTCATAACTATTGGCACTGGGCTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS-3UTR GCA 90 bp CAATCCTTGCACCTCAGAAGTGCATTTATGATTAAAATCATGCTCGACATGAAGATTGCATCGTTGGCCTaGAGGCTGGGAAGGATGTGG +
Preference number: 4 (lower is better)
Translates to: QSLHLRSAFMIKIMLDMKIASLA*RLGRMW
Trigger: CCACATCCTTCCCAGCCTGCAGGCCAACGATGCAAT...CTTCATGTCGAGCATGATTTTAATCATAAATGCACTTCTGAGGTGCAAGGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR TCA 90 bp TCCTGCCCTGATGAATCCCTAATTTCAGTACAAACTGAGGAACTTGAAAAACATACAACAGAGCAGCTCTaGGCTCAATCCTTGCACCTC +
Preference number: 4 (lower is better)
Translates to: SCPDESLISVQTEELEKHTTEQL*AQSLHL
Trigger: GAGGTGCAAGGATTGAGCTCAGAGCTGCTCTGTTGT...ATGTTTTTCAAGTTCCTCAGTTTGTACTGAAATTAGGGATTCATCAGGGCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp AAAATGCTCATTGGCCCTTCTCGAGGACTGAAAGGAGATTCGGAATCACATTTAGTCCATTTTACATACTaGGTCAGCGTGGCATCGAAC +
Preference number: 4 (lower is better)
Translates to: KMLIGPSRGLKGDSESHLVHFTY*VSVASN
Trigger: GTTCGATGCCACGCTGACCCAGTATGTAAAATGGAC...TAAATGTGATTCCGAATCTCCTTTCAGTCCTCGAGAAGGGCCAATGAGCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp CTGAAAGGAGATTCGGAATCACATTTAAAATTAACCCGTGACCCACTTCCTGTAAACATGTCTGTCGGGTaGTCCTGGAGAATCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LKGDSESHLKLTRDPLPVNMSVG*SWRICS
Trigger: GGAACAGATTCTCCAGGACCACCCGACAGACATGTT...TACAGGAAGTGGGTCACGGGTTAATTTTAAATGTGATTCCGAATCTCCTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp TCCTGCCCTGATGAATCCCTAATTTCAGTACAAACTGAGGAACTTGAAAAACATCGGGCTACGTTCTTATaGACGCTGGAGGTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: SCPDESLISVQTEELEKHRATFL*TLEVQF
Trigger: AAACTGCACCTCCAGCGTCCATAAGAACGTAGCCCG...ATGTTTTTCAAGTTCCTCAGTTTGTACTGAAATTAGGGATTCATCAGGGCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp AAAATCATGCTCGACATGAAGCCCTGTTATGATGTGCAGTTTAAAAAGAGAAACGGTGTGCACCGACCATaGGTCTGTCGGGTTAATAGA +
Preference number: 4 (lower is better)
Translates to: KIMLDMKPCYDVQFKKRNGVHRP*VCRVNR
Trigger: TCTATTAACCCGACAGACGCATGGTCGGTGCACACC...GTTTCTCTTTTTAAACTGCACATCATAACAGGGCTTCATGTCGAGCATGATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp CTGAAAGGAGATTCGGAATCACATTTAAAATTAACCCGTGACCCACTTCCTGTAGTGACTGCTGAAAAATaGTCATTGGCCCTTCTCGAG +
Preference number: 4 (lower is better)
Translates to: LKGDSESHLKLTRDPLPVVTAEK*SLALLE
Trigger: CTCGAGAAGGGCCAATGAGCATTTTTCAGCAGTCAC...TACAGGAAGTGGGTCACGGGTTAATTTTAAATGTGATTCCGAATCTCCTTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR GCA 90 bp TTTTGCCACAACAGAGCAGCTCTGAGCTCAATCCTTGCACCTCAGAAGTGCATTAGCCCTGTTATGATGTaGAGTTTAAAAAGAGAAACG +
Preference number: 4 (lower is better)
Translates to: FCHNRAALSSILAPQKCISPVMM*SLKRET
Trigger: CGTTTCTCTTTTTAAACTGCACATCATAACAGGGCT...AATGCACTTCTGAGGTGCAAGGATTGAGCTCAGAGCTGCTCTGTTGTGGCAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp CAATCCTTGCACCTCAGAAGTGCATTTATGATTAAAATCATGCTCGACATGAAGTCTGTCGGGTGGTCCTaGAGAATCTGTTCCCATAGT +
Preference number: 4 (lower is better)
Translates to: QSLHLRSAFMIKIMLDMKSVGWS*RICSHS
Trigger: ACTATGGGAACAGATTCTCCAGGACCACCCGACAGA...CTTCATGTCGAGCATGATTTTAATCATAAATGCACTTCTGAGGTGCAAGGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp CAATCCTTGCACCTCAGAAGTGCATTTATGATTAAAATCATGCTCGACATGAAGTGTGGGTATCGTAGATaGTCAGCGCGGCCTCATATT +
Preference number: 4 (lower is better)
Translates to: QSLHLRSAFMIKIMLDMKCGYRR*SARPHI
Trigger: AATATGAGGCCGCGCTGACCATCTACGATACCCACA...CTTCATGTCGAGCATGATTTTAATCATAAATGCACTTCTGAGGTGCAAGGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp CTGAAAGGAGATTCGGAATCACATTTAAAATTAACCCGTGACCCACTTCCTGTACACATCACAGCACTTTaGGTTTTGCCACAACAGAGC +
Preference number: 4 (lower is better)
Translates to: LKGDSESHLKLTRDPLPVHITAL*VLPQQS
Trigger: GCTCTGTTGTGGCAAAACCCAAAGTGCTGTGATGTG...TACAGGAAGTGGGTCACGGGTTAATTTTAAATGTGATTCCGAATCTCCTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381031.8
3UTR CAA 72 bp GATGAATTCATTTTAATCACAGAAATTTGCCTGGGCTaGAGCAAACTGTGGGGACTCAATAGATTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: DEFILITEICLG*SKLWGLNRFGG
Trigger: GCCTCCAAATCTATTGAGTCCCCACAGTTTGCTCAAGCCCAGGCAAATTTCTGTGATTAAAATGAATTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CCA 90 bp AAAATCATGCTCGACATGAAGCCCTGTTATGATGTGCAGTTTAAAAAGAGAAACGGCTTGAGCAAACTGTaGGGACTCAATAGATTTGGA +
Preference number: 4 (lower is better)
Translates to: KIMLDMKPCYDVQFKKRNGLSKL*GLNRFG
Trigger: TCCAAATCTATTGAGTCCCCACAGTTTGCTCAAGCC...GTTTCTCTTTTTAAACTGCACATCATAACAGGGCTTCATGTCGAGCATGATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS GCA 90 bp CCTTCCAGGCCTGGCAGTCGCGCAGAGGCGAGGCTGCGGCCATGTTaGGCCGGGTCGGAGTCCACCGCGAGCTCTGGGCACCCGGGCCTT +
Preference number: 5 (lower is better)
Translates to: PSRPGSRAEARLRPC*AGSESTASSGHPGL
Trigger: AAGGCCCGGGTGCCCAGAGCTCGCGGTGGACTCCGACCCGGCGCAACATGGCCGCAGCCTCGCCTCTGCGCGACTGCCAGGCCTGGAAGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS GCA 90 bp GAGCCTCGCATCCTTCCAGGCCTGGCAGTCGCGCAGAGGCGAGGCTaGGGCCATGTTGCGCCGGGTCGGAGTCCACCGCGAGCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: EPRILPGLAVAQRRG*GHVAPGRSPPRALG
Trigger: GCCCAGAGCTCGCGGTGGACTCCGACCCGGCGCAACATGGCCGCAGCCTCGCCTCTGCGCGACTGCCAGGCCTGGAAGGATGCGAGGCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS CCA 90 bp CTCTCTGGGCATTGCTCCCACCGAGCTGGACGATCCGGTAGCGGATaGGCAGGAGCAGCTCCAGGACGCGGTCAGGGTTCCCGTCCTCAG +
Preference number: 5 (lower is better)
Translates to: LSGHCSHRAGRSGSG*AGAAPGRGQGSRPQ
Trigger: CTGAGGACGGGAACCCTGACCGCGTCCTGGAGCTGCTCCTGCCCATCCGCTACCGGATCGTCCAGCTCGGTGGGAGCAATGCCCAGAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381031.8
ENST00000451998.1
CDS-3UTR CAA 90 bp GACGGTAGCTGCCTTGCGGATGAGCCGCTCGGTCAGGGGCGAGTTGGGCTTCAATGGACGGTAGCTGCCTaGCGGATGAGCCGCTCGGTC +
Preference number: 5 (lower is better)
Translates to: DGSCLADEPLGQGRVGLQWTVAA*RMSRSV
Trigger: GACCGAGCGGCTCATCCGCAAGGCAGCTACCGTCCA...TTGAAGCCCAACTCGCCCCTGACCGAGCGGCTCATCCGCAAGGCAGCTACCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451998.1
CDS CCA 90 bp GGGTCAGCGTGGCATCGAACAGCTTGCAGGCTTCGTTGCTTGTGGTaGAGAGCGGGAGCCTCGCATCCTTCCAGGCCTGGCAGTCGCGCA +
Preference number: 5 (lower is better)
Translates to: GSAWHRTACRLRCLW*RAGASHPSRPGSRA
Trigger: TGCGCGACTGCCAGGCCTGGAAGGATGCGAGGCTCCCGCTCTCCACCACAAGCAACGAAGCCTGCAAGCTGTTCGATGCCACGCTGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381031.8
ENST00000417709.5
ENST00000421359.5
ENST00000475467.1
ENST00000629918.1
CDS CCA 90 bp GATTCGCTGGCGTCCCGCAGGGTGGTCAGCAGCTCCTGTGTGGTCTaGGGGTCGTGTGCACCCAGGGATGCCATCAGGAAGTGTGCGTCA +
Preference number: 5 (lower is better)
Translates to: DSLASRRVVSSSCVV*GSCAPRDAIRKCAS
Trigger: TGACGCACACTTCCTGATGGCATCCCTGGGTGCACACGACCCCCAGACCACACAGGAGCTGCTGACCACCCTGCGGGACGCCAGCGAATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS CCA 90 bp CCTGGGTCAGCGTGGCATCGAACAGCTTGCAGGCTTCGTTGCTTGTaGTGGAGAGCGGGAGCCTCGCATCCTTCCAGGCCTGGCAGTCGC +
Preference number: 5 (lower is better)
Translates to: PGSAWHRTACRLRCL*WRAGASHPSRPGSR
Trigger: GCGACTGCCAGGCCTGGAAGGATGCGAGGCTCCCGCTCTCCACCACAAGCAACGAAGCCTGCAAGCTGTTCGATGCCACGCTGACCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417709.5
ENST00000475467.1
ENST00000629918.1
CDS CCA 90 bp CAGAAGGGGCCGCGGCCTCTCTCGGCAGGCATACCTGGGTCAGCGTaGCATCGAACAGCTTGCAGGCTTCGTTGCTTGTGGTGGAGAGCG +
Preference number: 5 (lower is better)
Translates to: QKGPRPLSAGIPGSA*HRTACRLRCLWWRA
Trigger: CGCTCTCCACCACAAGCAACGAAGCCTGCAAGCTGTTCGATGCCACGCTGACCCAGGTATGCCTGCCGAGAGAGGCCGCGGCCCCTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475467.1
CDS-3UTR CAA 90 bp CGGATGAGCCGCTCGGTCAGGGGCGAGTTGGGCTTCAAGGCATCACGCTCCATCACGTCTCTCTGGGCATaGCTCCCACCGAGCTGGACG +
Preference number: 5 (lower is better)
Translates to: RMSRSVRGELGFKASRSITSLWA*LPPSWT
Trigger: CGTCCAGCTCGGTGGGAGCAATGCCCAGAGAGACGT...GATGGAGCGTGATGCCTTGAAGCCCAACTCGCCCCTGACCGAGCGGCTCATCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451998.1
CDS-3UTR CAA 90 bp CAGGCTGGCTCACTGCATGAGGTGGACGGTAGCTGCCTTGCGGATGAGCCGCTCTCGGTCAGGGGCGAGTaGGGCTTCAAGGCATCACGC +
Preference number: 5 (lower is better)
Translates to: QAGSLHEVDGSCLADEPLSVRGE*GFKASR
Trigger: GCGTGATGCCTTGAAGCCCAACTCGCCCCTGACCGA...GAGCGGCTCATCCGCAAGGCAGCTACCGTCCACCTCATGCAGTGAGCCAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451998.1
CDS GCA 90 bp CAGAGTCCTGGGTCAGCGTGGCATCGAACAGCTTGCAGGCTTCGTTaGTTGTGGTGGAGAGCGGGAGCCTCGCATCCTTCCAGGCCTGGC +
Preference number: 5 (lower is better)
Translates to: QSPGSAWHRTACRLR*LWWRAGASHPSRPG
Trigger: GCCAGGCCTGGAAGGATGCGAGGCTCCCGCTCTCCACCACAAGCAACGAAGCCTGCAAGCTGTTCGATGCCACGCTGACCCAGGACTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417709.5
ENST00000629918.1
CDS GCA 90 bp GGCATACCTGGGTCAGCGTGGCATCGAACAGCTTGCAGGCTTCGTTaGTTGTGGTGGAGAGCGGGAGCCTCGCATCCTTCCAGGCCTGGC +
Preference number: 5 (lower is better)
Translates to: GIPGSAWHRTACRLR*LWWRAGASHPSRPG
Trigger: GCCAGGCCTGGAAGGATGCGAGGCTCCCGCTCTCCACCACAAGCAACGAAGCCTGCAAGCTGTTCGATGCCACGCTGACCCAGGTATGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475467.1
CDS CCA 90 bp ACTGGGTCAGCGTGGCATCGAACAGCTTGCAGGCTTCGTTGCTTGTaGTGGAGAGCGGGAGCCTCGCATCCTTCCAGGCCTGGCAGTCGC +
Preference number: 5 (lower is better)
Translates to: TGSAWHRTACRLRCL*WRAGASHPSRPGSR
Trigger: GCGACTGCCAGGCCTGGAAGGATGCGAGGCTCCCGCTCTCCACCACAAGCAACGAAGCCTGCAAGCTGTTCGATGCCACGCTGACCCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381031.8
ENST00000421359.5
CDS-3UTR CAA 90 bp GACACGTGCAGCTGCTCCCGCCTTGTCAGCGGCTGGGTTCTTGAAATCTCCACCGCAGCTGCTCCCGCCTaGTCAGCGGCTGGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: DTCSCSRLVSGWVLEISTAAAPA*SAAGFL
Trigger: CAAGAACCCAGCCGCTGACAAGGCGGGAGCAGCTGC...GGTGGAGATTTCAAGAACCCAGCCGCTGACAAGGCGGGAGCAGCTGCACGTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS TCA 90 bp GGGGGTCGTGTGCACCCAGGGATGCCATCAGGAAGTGTGCGTCATTaGACAGCAGGATGTGGTCTCGGCTGTGCTTCCGGGCCACAGGCA +
Preference number: 5 (lower is better)
Translates to: GGRVHPGMPSGSVRH*TAGCGLGCASGPQA
Trigger: TGCCTGTGGCCCGGAAGCACAGCCGAGACCACATCCTGCTGTTCAATGACGCACACTTCCTGATGGCATCCCTGGGTGCACACGACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS GCA 90 bp GTCCCGCAGGGTGGTCAGCAGCTCCTGTGTGGTCTGGGGGTCGTGTaGACCCAGGGATGCCATCAGGAAGTGTGCGTCATTGAACAGCAG +
Preference number: 5 (lower is better)
Translates to: VPQGGQQLLCGLGVV*TQGCHQEVCVIEQQ
Trigger: CTGCTGTTCAATGACGCACACTTCCTGATGGCATCCCTGGGTGCACACGACCCCCAGACCACACAGGAGCTGCTGACCACCCTGCGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CAA 90 bp AACCCGGTGGAGCAGCTGACTGGACGCAGTGACGCCACCACTGAGGTTCTGCAGAGCTTGCAGGCTTCGTaGCTTGTGGTGGAGAGCGGG +
Preference number: 5 (lower is better)
Translates to: NPVEQLTGRSDATTEVLQSLQAS*LVVESG
Trigger: CCCGCTCTCCACCACAAGCAACGAAGCCTGCAAGCT...CTGCAGAACCTCAGTGGTGGCGTCACTGCGTCCAGTCAGCTGCTCCACCGGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CAA 90 bp GGAGACAGAGGCGGCGCTCACAGGACCCGCTCCAGGCTTGTCACAGCCACACATGCCAGGTCCAGCTCTTaGTCCAGCTTCACGGAGCTT +
Preference number: 5 (lower is better)
Translates to: GDRGGAHRTRSRLVTATHARSSS*SSFTEL
Trigger: AAGCTCCGTGAAGCTGGACAAAGAGCTGGACCTGGC...ATGTGTGGCTGTGACAAGCCTGGAGCGGGTCCTGTGAGCGCCGCCTCTGTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS TCA 90 bp CCACATCCCACAGAGGGTCCCCGTCATGGTGCAGCTCATGTGCTTTaGAGAGGCTGCTCGCTCCTCCTGACCAGGCCCTTCCAGAAGGTC +
Preference number: 5 (lower is better)
Translates to: PHPTEGPRHGAAHVL*RGCSLLLTRPFQKV
Trigger: GACCTTCTGGAAGGGCCTGGTCAGGAGGAGCGAGCAGCCTCTTCAAAGCACATGAGCTGCACCATGACGGGGACCCTCTGTGGGATGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS GCA 90 bp ATCAGGAAGTGTGCGTCATTGAACAGCAGGATGTGGTCTCGGCTGTaGTTCCGGGCCACAGGCAGGACATCCTGCCACCGCTGGCCCACA +
Preference number: 5 (lower is better)
Translates to: IRKCASLNSRMWSRL*FRATGRTSCHRWPT
Trigger: TGTGGGCCAGCGGTGGCAGGATGTCCTGCCTGTGGCCCGGAAGCACAGCCGAGACCACATCCTGCTGTTCAATGACGCACACTTCCTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS GCA 90 bp TGTGGTCTGGGGGTCGTGTGCACCCAGGGATGCCATCAGGAAGTGTaGGTCATTGAACAGCAGGATGTGGTCTCGGCTGTGCTTCCGGGC +
Preference number: 5 (lower is better)
Translates to: CGLGVVCTQGCHQEV*VIEQQDVVSAVLPG
Trigger: GCCCGGAAGCACAGCCGAGACCACATCCTGCTGTTCAATGACGCACACTTCCTGATGGCATCCCTGGGTGCACACGACCCCCAGACCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS CCA 90 bp CCCAGGGATGCCATCAGGAAGTGTGCGTCATTGAACAGCAGGATGTaGTCTCGGCTGTGCTTCCGGGCCACAGGCAGGACATCCTGCCAC +
Preference number: 5 (lower is better)
Translates to: PRDAIRKCASLNSRM*SRLCFRATGRTSCH
Trigger: GTGGCAGGATGTCCTGCCTGTGGCCCGGAAGCACAGCCGAGACCACATCCTGCTGTTCAATGACGCACACTTCCTGATGGCATCCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CAA 90 bp AAGTTCCCATTGGCAAATGTCTCTACTGCAGACACGTGCAGCTGCTCCCGCCTTGAGGCTGCGGCCATGTaGCGCCGGGTCGGAGTCCAC +
Preference number: 5 (lower is better)
Translates to: KFPLANVSTADTCSCSRLEAAAM*RRVGVH
Trigger: GTGGACTCCGACCCGGCGCAACATGGCCGCAGCCTC...AAGGCGGGAGCAGCTGCACGTGTCTGCAGTAGAGACATTTGCCAATGGGAACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS-3UTR CAA 90 bp GGAGACAGAGGCGGCGCTCACAGGACCCGCTCCAGGCTTGTCACAGCCACACATGGGGACTCAATAGATTaGGAGGCCTCCTCTCCCTTC +
Preference number: 5 (lower is better)
Translates to: GDRGGAHRTRSRLVTATHGDSID*EASSPF
Trigger: GAAGGGAGAGGAGGCCTCCAAATCTATTGAGTCCCC...ATGTGTGGCTGTGACAAGCCTGGAGCGGGTCCTGTGAGCGCCGCCTCTGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS GCA 90 bp TTACATACTGGGTCAGCGTGGCATCGAACAGCTTGCAGGCTTCGTTaGTTGTGGTGGAGAGCGGGAGCCTCGCATCCTTCCAGGCCTGGC +
Preference number: 5 (lower is better)
Translates to: LHTGSAWHRTACRLR*LWWRAGASHPSRPG
Trigger: GCCAGGCCTGGAAGGATGCGAGGCTCCCGCTCTCCACCACAAGCAACGAAGCCTGCAAGCTGTTCGATGCCACGCTGACCCAGTATGTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381031.8
ENST00000421359.5
CDS-3UTR CAA 90 bp AACCCGGTGGAGCAGCTGACTGGACGCAGTGACGCCACCACTGAGGTTCTGCAGGTGGCATCGAACAGCTaGCAGGCTTCGTTGCTTGTG +
Preference number: 5 (lower is better)
Translates to: NPVEQLTGRSDATTEVLQVASNS*QASLLV
Trigger: CACAAGCAACGAAGCCTGCAAGCTGTTCGATGCCAC...CTGCAGAACCTCAGTGGTGGCGTCACTGCGTCCAGTCAGCTGCTCCACCGGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CAA 90 bp ACCCGCTCCAGGCTTGTCACAGCCACACATCACAGCACTTTGGGTTTTGCCACAGCAGCTGCTCCCGCCTaGTCAGCGGCTGGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: TRSRLVTATHHSTLGFATAAAPA*SAAGFL
Trigger: CAAGAACCCAGCCGCTGACAAGGCGGGAGCAGCTGC...TGTGGCAAAACCCAAAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS GCA 90 bp TGCTTCCTCTGCGTTTCCACATCCCACAGAGGGTCCCCGTCATGGTaGAGCTCATGTGCTTTGAAGAGGCTGCTCGCTCCTCCTGACCAG +
Preference number: 5 (lower is better)
Translates to: CFLCVSTSHRGSPSW*SSCALKRLLAPPDQ
Trigger: CTGGTCAGGAGGAGCGAGCAGCCTCTTCAAAGCACATGAGCTGCACCATGACGGGGACCCTCTGTGGGATGTGGAAACGCAGAGGAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS CCA 90 bp GGTAGAGCATGGAGCAGCTGTCCACCACGTCCAGCATTGCATCGTTaGCCTGCAGGCTGGGAAGGATGTGGGTATCGTAGATGGTCAGCG +
Preference number: 5 (lower is better)
Translates to: GRAWSSCPPRPALHR*PAGWEGCGYRRWSA
Trigger: CGCTGACCATCTACGATACCCACATCCTTCCCAGCCTGCAGGCCAACGATGCAATGCTGGACGTGGTGGACAGCTGCTCCATGCTCTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CAA 90 bp TCCAGCTCTTTGTCCAGCTTCACGGAGCTTCCAGTGCCAATCAGCACAAGGCCATGCAGGCTTCGTTGCTaGTGGTGGAGAGCGGGAGCC +
Preference number: 5 (lower is better)
Translates to: SSSLSSFTELPVPISTRPCRLRC*WWRAGA
Trigger: GGCTCCCGCTCTCCACCACAAGCAACGAAGCCTGCA...TGGCCTTGTGCTGATTGGCACTGGAAGCTCCGTGAAGCTGGACAAAGAGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS-3UTR CAA 90 bp GGAGACAGAGGCGGCGCTCACAGGACCCGCTCCAGGCTTGTCACAGCCACACATAGGAAGTGTGCGTCATaGAACAGCAGGATGTGGTCT +
Preference number: 5 (lower is better)
Translates to: GDRGGAHRTRSRLVTATHRKCAS*NSRMWS
Trigger: AGACCACATCCTGCTGTTCAATGACGCACACTTCCT...ATGTGTGGCTGTGACAAGCCTGGAGCGGGTCCTGTGAGCGCCGCCTCTGTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CAA 90 bp AAACTGTGGGGACTCAATAGATTTGGAGGCCTCCTCTCCCTTCTGAGAGGCCTGTGGACGGTAGCTGCCTaGCGGATGAGCCGCTCGGTC +
Preference number: 5 (lower is better)
Translates to: KLWGLNRFGGLLSLLRGLWTVAA*RMSRSV
Trigger: GACCGAGCGGCTCATCCGCAAGGCAGCTACCGTCCA...CAGGCCTCTCAGAAGGGAGAGGAGGCCTCCAAATCTATTGAGTCCCCACAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CAA 90 bp GTCCAAAGGCAGCAGGTGGGGGCCTCTCATAGTGTGACCCTGGGCAGGCCACTCACAGCACTTTGGGTTTaGCCACAACAGAGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: VQRQQVGASHSVTLGRPLTALWV*PQQSSS
Trigger: AGAGCTGCTCTGTTGTGGCAAAACCCAAAGTGCTGT...GAGTGGCCTGCCCAGGGTCACACTATGAGAGGCCCCCACCTGCTGCCTTTGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CAA 90 bp AAACTGTGGGGACTCAATAGATTTGGAGGCCTCCTCTCCCTTCTGAGAGGCCTGTGCAGGCTTCGTTGCTaGTGGTGGAGAGCGGGAGCC +
Preference number: 5 (lower is better)
Translates to: KLWGLNRFGGLLSLLRGLCRLRC*WWRAGA
Trigger: GGCTCCCGCTCTCCACCACAAGCAACGAAGCCTGCA...CAGGCCTCTCAGAAGGGAGAGGAGGCCTCCAAATCTATTGAGTCCCCACAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CAA 90 bp CGTGCAGCTGCTCCCGCCTTGTCAGCGGCTGGGTTCTTGAAATCTCCACCATTGGTGGCATCGAACAGCTaGCAGGCTTCGTTGCTTGTG +
Preference number: 5 (lower is better)
Translates to: RAAAPALSAAGFLKSPPLVASNS*QASLLV
Trigger: CACAAGCAACGAAGCCTGCAAGCTGTTCGATGCCAC...CAATGGTGGAGATTTCAAGAACCCAGCCGCTGACAAGGCGGGAGCAGCTGCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS-3UTR CAA 90 bp GCGGCGCTCACAGGACCCGCTCCAGGCTTGTCACAGCCACACATCACAGCACTTTCAGCGGCTGGGTTCTaGAAATCTCCACCATTGTCT +
Preference number: 5 (lower is better)
Translates to: AALTGPAPGLSQPHITALSAAGF*KSPPLS
Trigger: AGACAATGGTGGAGATTTCAAGAACCCAGCCGCTGA...AAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGGGTCCTGTGAGCGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CAA 90 bp AACATATCAGAGTCCTGCTCATCCTTCAGTAGCCAACTCAGAGGTTGCCCCCTCGCAGCTGCTCCCGCCTaGTCAGCGGCTGGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: NISESCSSFSSQLRGCPLAAAPA*SAAGFL
Trigger: CAAGAACCCAGCCGCTGACAAGGCGGGAGCAGCTGC...GAGGGGGCAACCTCTGAGTTGGCTACTGAAGGATGAGCAGGACTCTGATATGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS TCA 90 bp CGGGCTACGTTCTTATGGACGCTGGAGGTGCAGTTTAAGGCCGCGTaGATCAGCAGCTGGTTGAAGACGTCTCTCTGGGCATTGCTCCCA +
Preference number: 5 (lower is better)
Translates to: RATFLWTLEVQFKAA*ISSWLKTSLWALLP
Trigger: TGGGAGCAATGCCCAGAGAGACGTCTTCAACCAGCTGCTGATTCACGCGGCCTTAAACTGCACCTCCAGCGTCCATAAGAACGTAGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381031.8
ENST00000451998.1
CDS-3UTR CAA 90 bp TCCAGCTCTTTGTCCAGCTTCACGGAGCTTCCAGTGCCAATCAGCACAAGGCCAGCCAGGTCCAGCTCTTaGTCCAGCTTCACGGAGCTT +
Preference number: 5 (lower is better)
Translates to: SSSLSSFTELPVPISTRPARSSS*SSFTEL
Trigger: AAGCTCCGTGAAGCTGGACAAAGAGCTGGACCTGGC...TGGCCTTGTGCTGATTGGCACTGGAAGCTCCGTGAAGCTGGACAAAGAGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS-3UTR CAA 90 bp GTCCAAAGGCAGCAGGTGGGGGCCTCTCATAGTGTGACCCTGGGCAGGCCACTCAATTCCAACCCATCCTaGATCTCTGCTTTCATCTCG +
Preference number: 5 (lower is better)
Translates to: VQRQQVGASHSVTLGRPLNSNPS*ISAFIS
Trigger: CGAGATGAAAGCAGAGATCAAGGATGGGTTGGAATT...GAGTGGCCTGCCCAGGGTCACACTATGAGAGGCCCCCACCTGCTGCCTTTGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CAA 90 bp CTTGTCACAGCCACACATCACAGCACTTTGGGTTTTGCCACAACAGAGCAGCTCCCACCACGTCCAGCATaGCATCGTTGGCCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: LVTATHHSTLGFATTEQLPPRPA*HRWPAG
Trigger: GCCTGCAGGCCAACGATGCAATGCTGGACGTGGTGG...GAGCTGCTCTGTTGTGGCAAAACCCAAAGTGCTGTGATGTGTGGCTGTGACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CAA 90 bp GCGGCGCTCACAGGACCCGCTCCAGGCTTGTCACAGCCACACATCACAGCACTTACACATCACAGCACTTaGGGTTTTGCCACAACAGAG +
Preference number: 5 (lower is better)
Translates to: AALTGPAPGLSQPHITALTHHST*GFATTE
Trigger: CTCTGTTGTGGCAAAACCCAAAGTGCTGTGATGTGT...AAGTGCTGTGATGTGTGGCTGTGACAAGCCTGGAGCGGGTCCTGTGAGCGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CAA 90 bp AGCCCAGTTGAGTTTAATGCTTCCTCTGCGTTTCCACATCCCACAGAGGGTCCCGCCAGGTCCAGCTCTTaGTCCAGCTTCACGGAGCTT +
Preference number: 5 (lower is better)
Translates to: SPVEFNASSAFPHPTEGPARSSS*SSFTEL
Trigger: AAGCTCCGTGAAGCTGGACAAAGAGCTGGACCTGGC...GGGACCCTCTGTGGGATGTGGAAACGCAGAGGAAGCATTAAACTCAACTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS-3UTR CAA 90 bp GCCAGGTCCAGCTCTTTGTCCAGCTTCACGGAGCTTCCAGTGCCAATCAGCACATCAGCGGCTGGGTTCTaGAAATCTCCACCATTGTCT +
Preference number: 5 (lower is better)
Translates to: ARSSSLSSFTELPVPISTSAAGF*KSPPLS
Trigger: AGACAATGGTGGAGATTTCAAGAACCCAGCCGCTGA...TGTGCTGATTGGCACTGGAAGCTCCGTGAAGCTGGACAAAGAGCTGGACCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS-3UTR CAA 90 bp GCAGTAGACACATTCCCCTGGGAAACAGAATTTGCAAGGCAGGTGGAAAGAGCATCCAGCATTGCATCGTaGGCCTGCAGGCTGGGAAGG +
Preference number: 5 (lower is better)
Translates to: AVDTFPWETEFARQVERASSIAS*ACRLGR
Trigger: CCTTCCCAGCCTGCAGGCCAACGATGCAATGCTGGA...TGCTCTTTCCACCTGCCTTGCAAATTCTGTTTCCCAGGGGAATGTGTCTACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CAA 90 bp CAGCTGAGTCAGCGGCACATTCAGCAGGCGTTCAGTGGGGAAGCAGGAGACAGACCGAGACTCTTGTCATaGGTCCATTTTACATACTGG +
Preference number: 5 (lower is better)
Translates to: QLSQRHIQQAFSGEAGDRPRLLS*VHFTYW
Trigger: CCAGTATGTAAAATGGACCAATGACAAGAGTCTCGG...TCTGTCTCCTGCTTCCCCACTGAACGCCTGCTGAATGTGCCGCTGACTCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CAA 90 bp GTTGAGTTTAATGCTTCCTCTGCGTTTCCACATCCCACAGAGGGTCCCCGTCATGTTGGATCTGCTGCTTaGAGCTTTGACAGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: VEFNASSAFPHPTEGPRHVGSAA*SFDRQP
Trigger: GGGCTGCCTGTCAAAGCTCAAAGCAGCAGATCCAAC...ATGACGGGGACCCTCTGTGGGATGTGGAAACGCAGAGGAAGCATTAAACTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS-3UTR CAA 90 bp TCCTGCCCTGATGAATCCCTAATTTCAGTACAAACTGAGGAACTTGAAAAACATGAGGCTGCGGCCATGTaGCGCCGGGTCGGAGTCCAC +
Preference number: 5 (lower is better)
Translates to: SCPDESLISVQTEELEKHEAAAM*RRVGVH
Trigger: GTGGACTCCGACCCGGCGCAACATGGCCGCAGCCTC...ATGTTTTTCAAGTTCCTCAGTTTGTACTGAAATTAGGGATTCATCAGGGCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CAA 90 bp GCCAACATATCAGAGTCCTGCTCATCCTTCAGTAGCCAACTCAGAGGTTGCCCCTCAGCGGCTGGGTTCTaGAAATCTCCACCATTGTCT +
Preference number: 5 (lower is better)
Translates to: ANISESCSSFSSQLRGCPSAAGF*KSPPLS
Trigger: AGACAATGGTGGAGATTTCAAGAACCCAGCCGCTGA...GGGGCAACCTCTGAGTTGGCTACTGAAGGATGAGCAGGACTCTGATATGTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS-3UTR CAA 90 bp TCATCCTTCAGTAGCCAACTCAGAGGTTGCCCCCTCCAGGATGCCTTCCCTAGCTTCGGAAAGTTCCCATaGGCAAATGTCTCTACTGCA +
Preference number: 5 (lower is better)
Translates to: SSFSSQLRGCPLQDAFPSFGKFP*ANVSTA
Trigger: TGCAGTAGAGACATTTGCCAATGGGAACTTTCCGAA...GCTAGGGAAGGCATCCTGGAGGGGGCAACCTCTGAGTTGGCTACTGAAGGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS-3UTR CAA 90 bp ATCACAGAAATTTGCCTGGGCTTGAGCAAACTGTGGGGACTCAATAGATTTGGATCGGTCAGGGGCGAGTaGGGCTTCAAGGCATCACGC +
Preference number: 5 (lower is better)
Translates to: ITEICLGLSKLWGLNRFGSVRGE*GFKASR
Trigger: GCGTGATGCCTTGAAGCCCAACTCGCCCCTGACCGA...TCCAAATCTATTGAGTCCCCACAGTTTGCTCAAGCCCAGGCAAATTTCTGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CAA 90 bp TCACAGCCAGGTCCAGCTCTTTGTCCAGCTTCACGGAGCTTCCAGTGCCAATCAATGCCACCGAGACTCTaGTCATTGGTCCATTTTACA +
Preference number: 5 (lower is better)
Translates to: SQPGPALCPASRSFQCQSMPPRL*SLVHFT
Trigger: TGTAAAATGGACCAATGACAAGAGTCTCGGTGGCAT...TGATTGGCACTGGAAGCTCCGTGAAGCTGGACAAAGAGCTGGACCTGGCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS-3UTR CAA 90 bp TTTTGCCACAACAGAGCAGCTCTGAGCTCAATCCTTGCACCTCAGAAGTGCATTGTTGGATCTGCTGCTTaGAGCTTTGACAGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: FCHNRAALSSILAPQKCIVGSAA*SFDRQP
Trigger: GGGCTGCCTGTCAAAGCTCAAAGCAGCAGATCCAAC...AATGCACTTCTGAGGTGCAAGGATTGAGCTCAGAGCTGCTCTGTTGTGGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CAA 90 bp GCCCAGTTGAGTTTAATGCTTCCTCTGCGTTTCCACATCCCACAGAGGGTCCCCATAGATAAAGCCTCTTaGGCGAGTTTTTCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: AQLSLMLPLRFHIPQRVPIDKAS*ASFSAW
Trigger: CCAGGCAGAAAAACTCGCCAAAGAGGCTTTATCTAT...GGGGACCCTCTGTGGGATGTGGAAACGCAGAGGAAGCATTAAACTCAACTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS TCA 90 bp ATGAATTCCAACCCATCCTTGATCTCTGCTTTCATCTCGTGGATGTaGGCGACGGTGTGCACCGACCATGCGTCTGTCGGGTTAATAGAT +
Preference number: 5 (lower is better)
Translates to: MNSNPSLISAFISWM*ATVCTDHASVGLID
Trigger: ATCTATTAACCCGACAGACGCATGGTCGGTGCACACCGTCGCTCACATCCACGAGATGAAAGCAGAGATCAAGGATGGGTTGGAATTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381031.8
ENST00000422713.1
CDS CCA 90 bp GCATCATGGGAAAATTTCAGGGCCAACATGTCTGTCGGGTGGTCCTaGAGAATCTGTTCCCATAGTTCACAGGCTTTCGGAAAGTTCCCA +
Preference number: 5 (lower is better)
Translates to: ASWENFRANMSVGWS*RICSHSSQAFGKFP
Trigger: TGGGAACTTTCCGAAAGCCTGTGAACTATGGGAACAGATTCTCCAGGACCACCCGACAGACATGTTGGCCCTGAAATTTTCCCATGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381031.8
ENST00000421359.5
ENST00000422713.1
CDS-3UTR CAA 90 bp AGCCCAGTTGAGTTTAATGCTTCCTCTGCGTTTCCACATCCCACAGAGGGTCCCAATTCCAACCCATCCTaGATCTCTGCTTTCATCTCG +
Preference number: 5 (lower is better)
Translates to: SPVEFNASSAFPHPTEGPNSNPS*ISAFIS
Trigger: CGAGATGAAAGCAGAGATCAAGGATGGGTTGGAATT...GGGACCCTCTGTGGGATGTGGAAACGCAGAGGAAGCATTAAACTCAACTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS-3UTR CAA 90 bp AAAATGCTCATTGGCCCTTCTCGAGGACTGAAAGGAGATTCGGAATCACATTTAGGACCCGCTCCAGGCTaGTCACAGCCACACATCACA +
Preference number: 5 (lower is better)
Translates to: KMLIGPSRGLKGDSESHLGPAPG*SQPHIT
Trigger: TGTGATGTGTGGCTGTGACAAGCCTGGAGCGGGTCC...TAAATGTGATTCCGAATCTCCTTTCAGTCCTCGAGAAGGGCCAATGAGCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS CCA 90 bp GAGTTGGTGCCTCTTTGGCGAGTTTTTCTGCCTGGTCGTAGAAGTTaGTTTCCATCAAGCCAAAAGAGTAGATGCCTTTCACATAGCTGC +
Preference number: 5 (lower is better)
Translates to: ELVPLWRVFLPGRRS*FPSSQKSRCLSHSC
Trigger: GCAGCTATGTGAAAGGCATCTACTCTTTTGGCTTGATGGAAACCAACTTCTACGACCAGGCAGAAAAACTCGCCAAAGAGGCACCAACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421359.5
CDS-3UTR CAA 90 bp TACAAACTGAGGAACTTGAAAAACATCTGTGCACTGGGACCGCCCCTCACAGGATTCGGAAAGTTCCCATaGGCAAATGTCTCTACTGCA +
Preference number: 5 (lower is better)
Translates to: YKLRNLKNICALGPPLTGFGKFP*ANVSTA
Trigger: TGCAGTAGAGACATTTGCCAATGGGAACTTTCCGAA...TCCTGTGAGGGGCGGTCCCAGTGCACAGATGTTTTTCAAGTTCCTCAGTTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CAA 90 bp AAAATCATGCTCGACATGAAGCCCTGTTATGATGTGCAGTTTAAAAAGAGAAACACGTCTCTCTGGGCATaGCTCCCACCGAGCTGGACG +
Preference number: 5 (lower is better)
Translates to: KIMLDMKPCYDVQFKKRNTSLWA*LPPSWT
Trigger: CGTCCAGCTCGGTGGGAGCAATGCCCAGAGAGACGT...GTTTCTCTTTTTAAACTGCACATCATAACAGGGCTTCATGTCGAGCATGATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CAA 90 bp TTCACAGGCTTTCGGAAAGTTCCCATTGGCAAATGTCTCTACTGCAGACACGTGTTCGGAAAGTTCCCATaGGCAAATGTCTCTACTGCA +
Preference number: 5 (lower is better)
Translates to: FTGFRKVPIGKCLYCRHVFGKFP*ANVSTA
Trigger: TGCAGTAGAGACATTTGCCAATGGGAACTTTCCGAA...CACGTGTCTGCAGTAGAGACATTTGCCAATGGGAACTTTCCGAAAGCCTGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS-3UTR CAA 90 bp TTTTGCCACAACAGAGCAGCTCTGAGCTCAATCCTTGCACCTCAGAAGTGCATTATAGATAAAGCCTCTTaGGCGAGTTTTTCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: FCHNRAALSSILAPQKCIIDKAS*ASFSAW
Trigger: CCAGGCAGAAAAACTCGCCAAAGAGGCTTTATCTAT...AATGCACTTCTGAGGTGCAAGGATTGAGCTCAGAGCTGCTCTGTTGTGGCAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CAA 90 bp CTGAAAGGAGATTCGGAATCACATTTAAAATTAACCCGTGACCCACTTCCTGTAATGCCACCGAGACTCTaGTCATTGGTCCATTTTACA +
Preference number: 5 (lower is better)
Translates to: LKGDSESHLKLTRDPLPVMPPRL*SLVHFT
Trigger: TGTAAAATGGACCAATGACAAGAGTCTCGGTGGCAT...TACAGGAAGTGGGTCACGGGTTAATTTTAAATGTGATTCCGAATCTCCTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CAA 90 bp AAAATGCTCATTGGCCCTTCTCGAGGACTGAAAGGAGATTCGGAATCACATTTATTTAATCACAGAAATTaGCCTGGGCTTGAGCAAACT +
Preference number: 5 (lower is better)
Translates to: KMLIGPSRGLKGDSESHLFNHRN*PGLEQT
Trigger: AGTTTGCTCAAGCCCAGGCAAATTTCTGTGATTAAA...TAAATGTGATTCCGAATCTCCTTTCAGTCCTCGAGAAGGGCCAATGAGCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS-3UTR CAA 90 bp AAAATCATGCTCGACATGAAGCCCTGTTATGATGTGCAGTTTAAAAAGAGAAACTACAAACTGAGGAACTaGAAAAACATCTGTGCACTG +
Preference number: 5 (lower is better)
Translates to: KIMLDMKPCYDVQFKKRNYKLRN*KNICAL
Trigger: CAGTGCACAGATGTTTTTCAAGTTCCTCAGTTTGTA...GTTTCTCTTTTTAAACTGCACATCATAACAGGGCTTCATGTCGAGCATGATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS GCA 72 bp CCTGGCAGTCGCGCAGAGGCGAGGCTGCGGCCATGTTaGGCCGGGTCGGAGTCCACCGCGAGCTCTGGGCAC +
Preference number: 6 (lower is better)
Translates to: PGSRAEARLRPC*AGSESTASSGH
Trigger: GTGCCCAGAGCTCGCGGTGGACTCCGACCCGGCGCAACATGGCCGCAGCCTCGCCTCTGCGCGACTGCCAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS CAA 72 bp GCCTGGCAGTCGCGCAGAGGCGAGGCTGCGGCCATGTaGCGCCGGGTCGGAGTCCACCGCGAGCTCTGGGCA +
Preference number: 6 (lower is better)
Translates to: AWQSRRGEAAAM*RRVGVHRELWA
Trigger: TGCCCAGAGCTCGCGGTGGACTCCGACCCGGCGCAACATGGCCGCAGCCTCGCCTCTGCGCGACTGCCAGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS CAA 90 bp TCCTTCCAGGCCTGGCAGTCGCGCAGAGGCGAGGCTGCGGCCATGTaGCGCCGGGTCGGAGTCCACCGCGAGCTCTGGGCACCCGGGCCT +
Preference number: 6 (lower is better)
Translates to: SFQAWQSRRGEAAAM*RRVGVHRELWAPGP
Trigger: AGGCCCGGGTGCCCAGAGCTCGCGGTGGACTCCGACCCGGCGCAACATGGCCGCAGCCTCGCCTCTGCGCGACTGCCAGGCCTGGAAGGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417709.5
CDS GCA 72 bp ATCCTTCCAGGCCTGGCAGTCGCGCAGAGGCGAGGCTaGGGCCATGTTGCGCCGGGTCGGAGTCCACCGCGA +
Preference number: 6 (lower is better)
Translates to: ILPGLAVAQRRG*GHVAPGRSPPR
Trigger: TCGCGGTGGACTCCGACCCGGCGCAACATGGCCGCAGCCTCGCCTCTGCGCGACTGCCAGGCCTGGAAGGAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381031.8
ENST00000417709.5
ENST00000421359.5
ENST00000475467.1
CDS CCA 72 bp GCGTCCCGCAGGGTGGTCAGCAGCTCCTGTGTGGTCTaGGGGTCGTGTGCACCCAGGGATGCCATCAGGAAG +
Preference number: 6 (lower is better)
Translates to: ASRRVVSSSCVV*GSCAPRDAIRK
Trigger: CTTCCTGATGGCATCCCTGGGTGCACACGACCCCCAGACCACACAGGAGCTGCTGACCACCCTGCGGGACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381031.8
ENST00000451998.1
CDS CCA 72 bp CATTGCTCCCACCGAGCTGGACGATCCGGTAGCGGATaGGCAGGAGCAGCTCCAGGACGCGGTCAGGGTTCC +
Preference number: 6 (lower is better)
Translates to: HCSHRAGRSGSG*AGAAPGRGQGS
Trigger: GGAACCCTGACCGCGTCCTGGAGCTGCTCCTGCCCATCCGCTACCGGATCGTCCAGCTCGGTGGGAGCAATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381031.8
ENST00000451998.1
CDS CCA 72 bp ACAGAAGGGGCCGCGGCCTCTCTCGGCAGGCATACCTaGGTCAGCGTGGCATCGAACAGCTTGCAGGCTTCG +
Preference number: 6 (lower is better)
Translates to: TEGAAASLGRHT*VSVASNSLQAS
Trigger: CGAAGCCTGCAAGCTGTTCGATGCCACGCTGACCCAGGTATGCCTGCCGAGAGAGGCCGCGGCCCCTTCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475467.1
CDS CAA 90 bp TGGACGGTAGCTGCCTTGCGGATGAGCCGCTCGGTCAGGGGCGAGTaGGGCTTCAAGGCATCACGCTCCATCAGAAGGCTCCGGGCTACG +
Preference number: 6 (lower is better)
Translates to: WTVAALRMSRSVRGE*GFKASRSIRRLRAT
Trigger: CGTAGCCCGGAGCCTTCTGATGGAGCGTGATGCCTTGAAGCCCAACTCGCCCCTGACCGAGCGGCTCATCCGCAAGGCAGCTACCGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS CCA 72 bp CCGCGGCCTCTCTCGGCAGGCATACCTGGGTCAGCGTaGCATCGAACAGCTTGCAGGCTTCGTTGCTTGTGG +
Preference number: 6 (lower is better)
Translates to: PRPLSAGIPGSA*HRTACRLRCLW
Trigger: CCACAAGCAACGAAGCCTGCAAGCTGTTCGATGCCACGCTGACCCAGGTATGCCTGCCGAGAGAGGCCGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475467.1
CDS CAA 90 bp GCCTCTCTCGGCAGGCATACCTGGGTCAGCGTGGCATCGAACAGCTaGCAGGCTTCGTTGCTTGTGGTGGAGAGCGGGAGCCTCGCATCC +
Preference number: 6 (lower is better)
Translates to: ASLGRHTWVSVASNS*QASLLVVESGSLAS
Trigger: GGATGCGAGGCTCCCGCTCTCCACCACAAGCAACGAAGCCTGCAAGCTGTTCGATGCCACGCTGACCCAGGTATGCCTGCCGAGAGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475467.1
CDS CAA 90 bp TGGGGGTCGTGTGCACCCAGGGATGCCATCAGGAAGTGTGCGTCATaGAACAGCAGGATGTGGTCTCGGCTGTGCTTCCGGGCCACAGGC +
Preference number: 6 (lower is better)
Translates to: WGSCAPRDAIRKCAS*NSRMWSRLCFRATG
Trigger: GCCTGTGGCCCGGAAGCACAGCCGAGACCACATCCTGCTGTTCAATGACGCACACTTCCTGATGGCATCCCTGGGTGCACACGACCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS CAA 90 bp AGTCCTGGGTCAGCGTGGCATCGAACAGCTTGCAGGCTTCGTTGCTaGTGGTGGAGAGCGGGAGCCTCGCATCCTTCCAGGCCTGGCAGT +
Preference number: 6 (lower is better)
Translates to: SPGSAWHRTACRLRC*WWRAGASHPSRPGS
Trigger: ACTGCCAGGCCTGGAAGGATGCGAGGCTCCCGCTCTCCACCACAAGCAACGAAGCCTGCAAGCTGTTCGATGCCACGCTGACCCAGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417709.5
ENST00000629918.1
CDS CAA 90 bp TCAGAGTCCTGGGTCAGCGTGGCATCGAACAGCTTGCAGGCTTCGTaGCTTGTGGTGGAGAGCGGGAGCCTCGCATCCTTCCAGGCCTGG +
Preference number: 6 (lower is better)
Translates to: SESWVSVASNSLQAS*LVVESGSLASFQAW
Trigger: CCAGGCCTGGAAGGATGCGAGGCTCCCGCTCTCCACCACAAGCAACGAAGCCTGCAAGCTGTTCGATGCCACGCTGACCCAGGACTCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417709.5
ENST00000629918.1
CDS CAA 90 bp AGGCATACCTGGGTCAGCGTGGCATCGAACAGCTTGCAGGCTTCGTaGCTTGTGGTGGAGAGCGGGAGCCTCGCATCCTTCCAGGCCTGG +
Preference number: 6 (lower is better)
Translates to: RHTWVSVASNSLQAS*LVVESGSLASFQAW
Trigger: CCAGGCCTGGAAGGATGCGAGGCTCCCGCTCTCCACCACAAGCAACGAAGCCTGCAAGCTGTTCGATGCCACGCTGACCCAGGTATGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475467.1
CDS GCA 72 bp GGGTCAGCGTGGCATCGAACAGCTTGCAGGCTTCGTTaGTTGTGGTGGAGAGCGGGAGCCTCGCATCCTTCC +
Preference number: 6 (lower is better)
Translates to: GSAWHRTACRLR*LWWRAGASHPS
Trigger: GGAAGGATGCGAGGCTCCCGCTCTCCACCACAAGCAACGAAGCCTGCAAGCTGTTCGATGCCACGCTGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381031.8
ENST00000417709.5
ENST00000421359.5
ENST00000475467.1
ENST00000629918.1
CDS GCA 72 bp TGTGCGTCATTGAACAGCAGGATGTGGTCTCGGCTGTaGTTCCGGGCCACAGGCAGGACATCCTGCCACCGC +
Preference number: 6 (lower is better)
Translates to: CASLNSRMWSRL*FRATGRTSCHR
Trigger: GCGGTGGCAGGATGTCCTGCCTGTGGCCCGGAAGCACAGCCGAGACCACATCCTGCTGTTCAATGACGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS CCA 72 bp TGGCATCGAACAGCTTGCAGGCTTCGTTGCTTGTGGTaGAGAGCGGGAGCCTCGCATCCTTCCAGGCCTGGC +
Preference number: 6 (lower is better)
Translates to: WHRTACRLRCLW*RAGASHPSRPG
Trigger: GCCAGGCCTGGAAGGATGCGAGGCTCCCGCTCTCCACCACAAGCAACGAAGCCTGCAAGCTGTTCGATGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381031.8
ENST00000417709.5
ENST00000421359.5
ENST00000475467.1
ENST00000629918.1
CDS CCA 72 bp GCGTGGCATCGAACAGCTTGCAGGCTTCGTTGCTTGTaGTGGAGAGCGGGAGCCTCGCATCCTTCCAGGCCT +
Preference number: 6 (lower is better)
Translates to: AWHRTACRLRCL*WRAGASHPSRP
Trigger: AGGCCTGGAAGGATGCGAGGCTCCCGCTCTCCACCACAAGCAACGAAGCCTGCAAGCTGTTCGATGCCACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381031.8
ENST00000417709.5
ENST00000421359.5
ENST00000475467.1
ENST00000629918.1
CDS CAA 72 bp GGCAGGCATACCTGGGTCAGCGTGGCATCGAACAGCTaGCAGGCTTCGTTGCTTGTGGTGGAGAGCGGGAGC +
Preference number: 6 (lower is better)
Translates to: GRHTWVSVASNS*QASLLVVESGS
Trigger: GCTCCCGCTCTCCACCACAAGCAACGAAGCCTGCAAGCTGTTCGATGCCACGCTGACCCAGGTATGCCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475467.1
CDS CAA 90 bp CATACTGGGTCAGCGTGGCATCGAACAGCTTGCAGGCTTCGTTGCTaGTGGTGGAGAGCGGGAGCCTCGCATCCTTCCAGGCCTGGCAGT +
Preference number: 6 (lower is better)
Translates to: HTGSAWHRTACRLRC*WWRAGASHPSRPGS
Trigger: ACTGCCAGGCCTGGAAGGATGCGAGGCTCCCGCTCTCCACCACAAGCAACGAAGCCTGCAAGCTGTTCGATGCCACGCTGACCCAGTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381031.8
ENST00000421359.5
CDS CAA 90 bp ATACCTGGGTCAGCGTGGCATCGAACAGCTTGCAGGCTTCGTTGCTaGTGGTGGAGAGCGGGAGCCTCGCATCCTTCCAGGCCTGGCAGT +
Preference number: 6 (lower is better)
Translates to: IPGSAWHRTACRLRC*WWRAGASHPSRPGS
Trigger: ACTGCCAGGCCTGGAAGGATGCGAGGCTCCCGCTCTCCACCACAAGCAACGAAGCCTGCAAGCTGTTCGATGCCACGCTGACCCAGGTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475467.1
CDS TCA 72 bp ACAGAGGGTCCCCGTCATGGTGCAGCTCATGTGCTTTaGAGAGGCTGCTCGCTCCTCCTGACCAGGCCCTTC +
Preference number: 6 (lower is better)
Translates to: TEGPRHGAAHVL*RGCSLLLTRPF
Trigger: GAAGGGCCTGGTCAGGAGGAGCGAGCAGCCTCTTCAAAGCACATGAGCTGCACCATGACGGGGACCCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS GCA 72 bp GGTGGTCAGCAGCTCCTGTGTGGTCTGGGGGTCGTGTaGACCCAGGGATGCCATCAGGAAGTGTGCGTCATT +
Preference number: 6 (lower is better)
Translates to: GGQQLLCGLGVV*TQGCHQEVCVI
Trigger: AATGACGCACACTTCCTGATGGCATCCCTGGGTGCACACGACCCCCAGACCACACAGGAGCTGCTGACCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS CAA 72 bp TGGGTCAGCGTGGCATCGAACAGCTTGCAGGCTTCGTaGCTTGTGGTGGAGAGCGGGAGCCTCGCATCCTTC +
Preference number: 6 (lower is better)
Translates to: WVSVASNSLQAS*LVVESGSLASF
Trigger: GAAGGATGCGAGGCTCCCGCTCTCCACCACAAGCAACGAAGCCTGCAAGCTGTTCGATGCCACGCTGACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381031.8
ENST00000417709.5
ENST00000421359.5
ENST00000475467.1
ENST00000629918.1
CDS CAA 72 bp GGTAGAGCATGGAGCAGCTGTCCACCACGTCCAGCATaGCATCGTTGGCCTGCAGGCTGGGAAGGATGTGGG +
Preference number: 6 (lower is better)
Translates to: GRAWSSCPPRPA*HRWPAGWEGCG
Trigger: CCCACATCCTTCCCAGCCTGCAGGCCAACGATGCAATGCTGGACGTGGTGGACAGCTGCTCCATGCTCTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS CAA 72 bp CACTCAGAGTCCTGGGTCAGCGTGGCATCGAACAGCTaGCAGGCTTCGTTGCTTGTGGTGGAGAGCGGGAGC +
Preference number: 6 (lower is better)
Translates to: HSESWVSVASNS*QASLLVVESGS
Trigger: GCTCCCGCTCTCCACCACAAGCAACGAAGCCTGCAAGCTGTTCGATGCCACGCTGACCCAGGACTCTGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417709.5
ENST00000629918.1
CDS CAA 90 bp TCCACATCCCACAGAGGGTCCCCGTCATGGTGCAGCTCATGTGCTTaGAAGAGGCTGCTCGCTCCTCCTGACCAGGCCCTTCCAGAAGGT +
Preference number: 6 (lower is better)
Translates to: STSHRGSPSWCSSCA*KRLLAPPDQALPEG
Trigger: ACCTTCTGGAAGGGCCTGGTCAGGAGGAGCGAGCAGCCTCTTCAAAGCACATGAGCTGCACCATGACGGGGACCCTCTGTGGGATGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS GCA 72 bp GGGGTCGTGTGCACCCAGGGATGCCATCAGGAAGTGTaGGTCATTGAACAGCAGGATGTGGTCTCGGCTGTG +
Preference number: 6 (lower is better)
Translates to: GVVCTQGCHQEV*VIEQQDVVSAV
Trigger: CACAGCCGAGACCACATCCTGCTGTTCAATGACGCACACTTCCTGATGGCATCCCTGGGTGCACACGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS CAA 90 bp TTTACATACTGGGTCAGCGTGGCATCGAACAGCTTGCAGGCTTCGTaGCTTGTGGTGGAGAGCGGGAGCCTCGCATCCTTCCAGGCCTGG +
Preference number: 6 (lower is better)
Translates to: FTYWVSVASNSLQAS*LVVESGSLASFQAW
Trigger: CCAGGCCTGGAAGGATGCGAGGCTCCCGCTCTCCACCACAAGCAACGAAGCCTGCAAGCTGTTCGATGCCACGCTGACCCAGTATGTAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381031.8
ENST00000421359.5
CDS CAA 90 bp TCTGCAGGCGGTAGAGCATGGAGCAGCTGTCCACCACGTCCAGCATaGCATCGTTGGCCTGCAGGCTGGGAAGGATGTGGGTATCGTAGA +
Preference number: 6 (lower is better)
Translates to: SAGGRAWSSCPPRPA*HRWPAGWEGCGYRR
Trigger: TCTACGATACCCACATCCTTCCCAGCCTGCAGGCCAACGATGCAATGCTGGACGTGGTGGACAGCTGCTCCATGCTCTACCGCCTGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS GCA 72 bp TGCGTTTCCACATCCCACAGAGGGTCCCCGTCATGGTaGAGCTCATGTGCTTTGAAGAGGCTGCTCGCTCCT +
Preference number: 6 (lower is better)
Translates to: CVSTSHRGSPSW*SSCALKRLLAP
Trigger: AGGAGCGAGCAGCCTCTTCAAAGCACATGAGCTGCACCATGACGGGGACCCTCTGTGGGATGTGGAAACGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS CCA 72 bp TGGAGCAGCTGTCCACCACGTCCAGCATTGCATCGTTaGCCTGCAGGCTGGGAAGGATGTGGGTATCGTAGA +
Preference number: 6 (lower is better)
Translates to: WSSCPPRPALHR*PAGWEGCGYRR
Trigger: TCTACGATACCCACATCCTTCCCAGCCTGCAGGCCAACGATGCAATGCTGGACGTGGTGGACAGCTGCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS CCA 72 bp CCACAGACACTCCTTCCATCTGCAGGCGGTAGAGCATaGAGCAGCTGTCCACCACGTCCAGCATTGCATCGT +
Preference number: 6 (lower is better)
Translates to: PQTLLPSAGGRA*SSCPPRPALHR
Trigger: ACGATGCAATGCTGGACGTGGTGGACAGCTGCTCCATGCTCTACCGCCTGCAGATGGAAGGAGTGTCTGTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS CCA 72 bp CTCTGCGTTTCCACATCCCACAGAGGGTCCCCGTCATaGTGCAGCTCATGTGCTTTGAAGAGGCTGCTCGCT +
Preference number: 6 (lower is better)
Translates to: LCVSTSHRGSPS*CSSCALKRLLA
Trigger: AGCGAGCAGCCTCTTCAAAGCACATGAGCTGCACCATGACGGGGACCCTCTGTGGGATGTGGAAACGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS CAA 72 bp TGTGCACCCAGGGATGCCATCAGGAAGTGTGCGTCATaGAACAGCAGGATGTGGTCTCGGCTGTGCTTCCGG +
Preference number: 6 (lower is better)
Translates to: CAPRDAIRKCAS*NSRMWSRLCFR
Trigger: CCGGAAGCACAGCCGAGACCACATCCTGCTGTTCAATGACGCACACTTCCTGATGGCATCCCTGGGTGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS TCA 72 bp AACCCATCCTTGATCTCTGCTTTCATCTCGTGGATGTaGGCGACGGTGTGCACCGACCATGCGTCTGTCGGG +
Preference number: 6 (lower is better)
Translates to: NPSLISAFISWM*ATVCTDHASVG
Trigger: CCCGACAGACGCATGGTCGGTGCACACCGTCGCTCACATCCACGAGATGAAAGCAGAGATCAAGGATGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381031.8
ENST00000422713.1
CDS TCA 72 bp AGGTGCAGTTTAAGGCCGCGTGAATCAGCAGCTGGTTaGAGACGTCTCTCTGGGCATTGCTCCCACCGAGCT +
Preference number: 6 (lower is better)
Translates to: RCSLRPRESAAG*RRLSGHCSHRA
Trigger: AGCTCGGTGGGAGCAATGCCCAGAGAGACGTCTTCAACCAGCTGCTGATTCACGCGGCCTTAAACTGCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381031.8
ENST00000451998.1
CDS CCA 72 bp CCATCAGAAGGCTCCGGGCTACGTTCTTATGGACGCTaGAGGTGCAGTTTAAGGCCGCGTGAATCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: PSEGSGLRSYGR*RCSLRPRESAA
Trigger: AGCTGCTGATTCACGCGGCCTTAAACTGCACCTCCAGCGTCCATAAGAACGTAGCCCGGAGCCTTCTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS CCA 72 bp GTGAGACCTTGCCTCGGGCTACGTTCTTATGGACGCTaGAGGTGCAGTTTAAGGCCGCGTGAATCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: VRPCLGLRSYGR*RCSLRPRESAA
Trigger: AGCTGCTGATTCACGCGGCCTTAAACTGCACCTCCAGCGTCCATAAGAACGTAGCCCGAGGCAAGGTCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451998.1
CDS CAA 90 bp TCATTGGTCCATTTTACATACTGGGTCAGCGTGGCATCGAACAGCTaGCAGGCTTCGTTGCTTGTGGTGGAGAGCGGGAGCCTCGCATCC +
Preference number: 6 (lower is better)
Translates to: SLVHFTYWVSVASNS*QASLLVVESGSLAS
Trigger: GGATGCGAGGCTCCCGCTCTCCACCACAAGCAACGAAGCCTGCAAGCTGTTCGATGCCACGCTGACCCAGTATGTAAAATGGACCAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381031.8
ENST00000421359.5
CDS TCA 72 bp CTCGCTCCTCCTGACCAGGCCCTTCCAGAAGGTCTCTaGGTGCTGCATGAATTCCAACCCATCCTTGATCTC +
Preference number: 6 (lower is better)
Translates to: LAPPDQALPEGL*VLHEFQPILDL
Trigger: GAGATCAAGGATGGGTTGGAATTCATGCAGCACTCAGAGACCTTCTGGAAGGGCCTGGTCAGGAGGAGCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS CAA 72 bp CATTTTACATACTGGGTCAGCGTGGCATCGAACAGCTaGCAGGCTTCGTTGCTTGTGGTGGAGAGCGGGAGC +
Preference number: 6 (lower is better)
Translates to: HFTYWVSVASNS*QASLLVVESGS
Trigger: GCTCCCGCTCTCCACCACAAGCAACGAAGCCTGCAAGCTGTTCGATGCCACGCTGACCCAGTATGTAAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381031.8
ENST00000421359.5
CDS CAA 72 bp GACAGGCAGCCCTCGATGCCACCGAGACTCTTGTCATaGGTCCATTTTACATACTGGGTCAGCGTGGCATCG +
Preference number: 6 (lower is better)
Translates to: DRQPSMPPRLLS*VHFTYWVSVAS
Trigger: CGATGCCACGCTGACCCAGTATGTAAAATGGACCAATGACAAGAGTCTCGGTGGCATCGAGGGCTGCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381031.8
ENST00000421359.5
CDS TCA 72 bp TTCTTATGGACGCTGGAGGTGCAGTTTAAGGCCGCGTaGATCAGCAGCTGGTTGAAGACGTCTCTCTGGGCA +
Preference number: 6 (lower is better)
Translates to: FLWTLEVQFKAA*ISSWLKTSLWA
Trigger: TGCCCAGAGAGACGTCTTCAACCAGCTGCTGATTCACGCGGCCTTAAACTGCACCTCCAGCGTCCATAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381031.8
ENST00000451998.1
CDS GCA 72 bp CTCCTCCTGACCAGGCCCTTCCAGAAGGTCTCTGAGTaGTGCATGAATTCCAACCCATCCTTGATCTCTGCT +
Preference number: 6 (lower is better)
Translates to: LLLTRPFQKVSE*CMNSNPSLISA
Trigger: AGCAGAGATCAAGGATGGGTTGGAATTCATGCAGCACTCAGAGACCTTCTGGAAGGGCCTGGTCAGGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422713.1
CDS CCA 72 bp ACAGGCAGCCCTCGATGCCACCGAGACTCTTGTCATTaGTCCATTTTACATACTGGGTCAGCGTGGCATCGA +
Preference number: 6 (lower is better)
Translates to: TGSPRCHRDSCH*SILHTGSAWHR
Trigger: TCGATGCCACGCTGACCCAGTATGTAAAATGGACCAATGACAAGAGTCTCGGTGGCATCGAGGGCTGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381031.8
ENST00000421359.5
CDS CCA 72 bp CATCACAGCCTGCTTTTCCTGCCCAGTAGTTGTCTGTaGGGTGCTGGTGTTGAAGACAAAGAGTTGGTGCCT +
Preference number: 6 (lower is better)
Translates to: HHSLLFLPSSCL*GAGVEDKELVP
Trigger: AGGCACCAACTCTTTGTCTTCAACACCAGCACCCCACAGACAACTACTGGGCAGGAAAAGCAGGCTGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421359.5
CDS CAA 72 bp AGCTTTGACAGGCAGCCCTCGATGCCACCGAGACTCTaGTCATTGGTCCATTTTACATACTGGGTCAGCGTG +
Preference number: 6 (lower is better)
Translates to: SFDRQPSMPPRL*SLVHFTYWVSV
Trigger: CACGCTGACCCAGTATGTAAAATGGACCAATGACAAGAGTCTCGGTGGCATCGAGGGCTGCCTGTCAAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381031.8
ENST00000421359.5
CDS CCA 72 bp GAAAATTTCAGGGCCAACATGTCTGTCGGGTGGTCCTaGAGAATCTGTTCCCATAGTTCACAGGCTTTCGGA +
Preference number: 6 (lower is better)
Translates to: ENFRANMSVGWS*RICSHSSQAFG
Trigger: TCCGAAAGCCTGTGAACTATGGGAACAGATTCTCCAGGACCACCCGACAGACATGTTGGCCCTGAAATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381031.8
ENST00000421359.5
ENST00000422713.1
CDS CCA 72 bp TCATGGGAAAATTTCAGGGCCAACATGTCTGTCGGGTaGTCCTGGAGAATCTGTTCCCATAGTTCACAGGCT +
Preference number: 6 (lower is better)
Translates to: SWENFRANMSVG*SWRICSHSSQA
Trigger: AGCCTGTGAACTATGGGAACAGATTCTCCAGGACCACCCGACAGACATGTTGGCCCTGAAATTTTCCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381031.8
ENST00000421359.5
ENST00000422713.1
CDS GCA 72 bp GCCAACATATCAGAGTCCTTCCAGAAGGTCTCTGAGTaGTGCATGAATTCCAACCCATCCTTGATCTCTGCT +
Preference number: 6 (lower is better)
Translates to: ANISESFQKVSE*CMNSNPSLISA
Trigger: AGCAGAGATCAAGGATGGGTTGGAATTCATGCAGCACTCAGAGACCTTCTGGAAGGACTCTGATATGTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS TCA 72 bp ACAAGCCAACATATCAGAGTCCTTCCAGAAGGTCTCTaGGTGCTGCATGAATTCCAACCCATCCTTGATCTC +
Preference number: 6 (lower is better)
Translates to: TSQHIRVLPEGL*VLHEFQPILDL
Trigger: GAGATCAAGGATGGGTTGGAATTCATGCAGCACTCAGAGACCTTCTGGAAGGACTCTGATATGTTGGCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381031.8
CDS GCA 72 bp AAGACAAAGAGTTGGTGCCTCTTTGGCGAGTTTTTCTaGCTGGTCGTAGAAGTTGGTTTCCATCAAGCCAAA +
Preference number: 6 (lower is better)
Translates to: KTKSWCLFGEFF*LVVEVGFHQAK
Trigger: TTTGGCTTGATGGAAACCAACTTCTACGACCAGGCAGAAAAACTCGCCAAAGAGGCACCAACTCTTTGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421359.5
CDS CCA 72 bp CCTCTTTGGCGAGTTTTTCTGCCTGGTCGTAGAAGTTaGTTTCCATCAAGCCAAAAGAGTAGATGCCTTTCA +
Preference number: 6 (lower is better)
Translates to: PLWRVFLPGRRS*FPSSQKSRCLS
Trigger: TGAAAGGCATCTACTCTTTTGGCTTGATGGAAACCAACTTCTACGACCAGGCAGAAAAACTCGCCAAAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381031.8
ENST00000421359.5
ENST00000422713.1