RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTC37 (Homo sapiens)

Ensembl gene IDs: ENSG00000198677

Ensembl transcript IDs: ENST00000358746.7, ENST00000502768.1, ENST00000503279.1, ENST00000504421.1, ENST00000505578.5, ENST00000506007.1, ENST00000507805.5, ENST00000508181.5, ENST00000512026.5, ENST00000513232.1, ENST00000514952.5, ENST00000515176.5, ENST00000515207.1, ENST00000649566.1

Found 413 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTCGCCTAAGCCAGGCCCATTTTGCCGTTCCAGCACTTGCCTTTTaGGTTACTGTTGTTAGGATAGCTAAAGCCATTTCCATATCTTCA +
Preference number: 1 (lower is better)
Translates to: PRLSQAHFAVPALAF*VTVVRIAKAISISS
Trigger: TGAAGATATGGAAATGGCTTTAGCTATCCTAACAACAGTAACTCAAAAGGCAAGTGCTGGAACGGCAAAATGGGCCTGGCTTAGGCGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513232.1
3UTR CCA 90 bp GGGCTATGCAGGCAGCCTTTTGAAGTGCATCTGTGGCTAAGTCTGTaGACCAGGTTGTTAAAATCACTGAATCAGTTTGACAGTTATGAA +
Preference number: 1 (lower is better)
Translates to: GLCRQPFEVHLWLSL*TRLLKSLNQFDSYE
Trigger: TTCATAACTGTCAAACTGATTCAGTGATTTTAACAACCTGGTCCACAGACTTAGCCACAGATGCACTTCAAAAGGCTGCCTGCATAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649566.1
3UTR CCA 90 bp GATTTGCTGTATTGCTGCAACCTTAAACACACTGTATATGGATTCTaGGTTCAGCTCACTGGCTTTTGTGAAGGACTTCAAGGCTGTTGT +
Preference number: 1 (lower is better)
Translates to: DLLYCCNLKHTVYGF*VQLTGFCEGLQGCC
Trigger: ACAACAGCCTTGAAGTCCTTCACAAAAGCCAGTGAGCTGAACCCAGAATCCATATACAGTGTGTTTAAGGTTGCAGCAATACAGCAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505578.5
ENST00000513232.1
3UTR CCA 90 bp AAAAATTATGTGAGCAGAAATTATCTGAGGCTCACGGTAACTGGGTaGCAATTTGAGAAGAAGGCAACGAAAGTTAAGGGAGAATGTGTG +
Preference number: 1 (lower is better)
Translates to: KNYVSRNYLRLTVTG*QFEKKATKVKGECV
Trigger: CACACATTCTCCCTTAACTTTCGTTGCCTTCTTCTCAAATTGCCACCCAGTTACCGTGAGCCTCAGATAATTTCTGCTCACATAATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649566.1
3UTR TCA 90 bp CTGGCCACTGTTTTAGAGTTTCTGGAATCTGATAACACTGATTCGTaGATTTCCTTTGCTTTAGGCATGTTGTTTAACACCATTCACCTT +
Preference number: 1 (lower is better)
Translates to: LATVLEFLESDNTDS*ISFALGMLFNTIHL
Trigger: AAGGTGAATGGTGTTAAACAACATGCCTAAAGCAAAGGAAATTCACGAATCAGTGTTATCAGATTCCAGAAACTCTAAAACAGTGGCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
3UTR-3UTR GCA 90 bp CTGTATATGGATTCTGGGTTCAGCTCACTGGCTTTTGTGAAGGACTTCAAGGCTATGCTGCTCAGCCACTaGTTGAGAATGCTGACCAGC +
Preference number: 2 (lower is better)
Translates to: LYMDSGFSSLAFVKDFKAMLLSH*LRMLTS
Trigger: GCTGGTCAGCATTCTCAAGCAGTGGCTGAGCAGCAT...AGCCTTGAAGTCCTTCACAAAAGCCAGTGAGCTGAACCCAGAATCCATATACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513232.1
3UTR-3UTR GCA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTCCAGAAGGCGGAGATTaGAGTGAGCTGAGATTGCAC +
Preference number: 2 (lower is better)
Translates to: DKKGSASHIHSYSKIGFIPEGGD*SELRLH
Trigger: GTGCAATCTCAGCTCACTGCAATCTCCGCCTTCTGG...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649566.1
3UTR-3UTR CCA 90 bp TCCATATCTTCAAGCTCCACACTTAGGTCAACTGCTGCAGCTCCAGATTCAGCAACTGTATATGGATTCTaGGTTCAGCTCACTGGCTTT +
Preference number: 2 (lower is better)
Translates to: SISSSSTLRSTAAAPDSATVYGF*VQLTGF
Trigger: AAAGCCAGTGAGCTGAACCCAGAATCCATATACAGT...TGCTGAATCTGGAGCTGCAGCAGTTGACCTAAGTGTGGAGCTTGAAGATATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513232.1
3UTR-3UTR TCA 90 bp ATGGATTCTGGGTTCAGCTCACTGGCTTTTGTGAAGGACTTCAAGGCTGTTGTGTTGTCTCTTCACCCATaGACCAGTATGTTAATCCAA +
Preference number: 2 (lower is better)
Translates to: MDSGFSSLAFVKDFKAVVLSLHP*TSMLIQ
Trigger: TTGGATTAACATACTGGTTCATGGGTGAAGAGACAA...CACAACAGCCTTGAAGTCCTTCACAAAAGCCAGTGAGCTGAACCCAGAATCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513232.1
3UTR-3UTR TCA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTAGAAAAACCTGGGTTTaGGGTCCCTGGAAGGCAGAA +
Preference number: 2 (lower is better)
Translates to: DKKGSASHIHSYSKIGFIRKTWV*GPWKAE
Trigger: TTCTGCCTTCCAGGGACCTCAAACCCAGGTTTTTCT...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000649566.1
3UTR-3UTR GCA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTGGCATACCTTTAAAATaGAGAGTCCTAGGCCTGTCC +
Preference number: 2 (lower is better)
Translates to: DKKGSASHIHSYSKIGFIGIPLK*RVLGLS
Trigger: GGACAGGCCTAGGACTCTGCATTTTAAAGGTATGCC...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649566.1
3UTR-3UTR CCA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTTTTGAAGTGCATCTGTaGCTAAGTCTGTGGACCAGG +
Preference number: 2 (lower is better)
Translates to: DKKGSASHIHSYSKIGFIFEVHL*LSLWTR
Trigger: CCTGGTCCACAGACTTAGCCACAGATGCACTTCAAA...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000649566.1
3UTR-3UTR TCA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCAGCAGGAGAATCACTTaGACCCAGAAGGCGGAGATT +
Preference number: 2 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFSRRIT*TQKAEI
Trigger: AATCTCCGCCTTCTGGGTTCAAGTGATTCTCCTGCT...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649566.1
3UTR-3UTR GCA 90 bp AAACACACTGTATATGGATTCTGGGTTCAGCTCACTGGCTTTTGTGAAGGACTTTTGTGTAGCCTCCTCTaGTTAAGTATGCTTCTCCTA +
Preference number: 2 (lower is better)
Translates to: KHTVYGFWVQLTGFCEGLLCSLL*LSMLLL
Trigger: TAGGAGAAGCATACTTAAGCAGAGGAGGCTACACAA...AAGTCCTTCACAAAAGCCAGTGAGCTGAACCCAGAATCCATATACAGTGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505578.5
ENST00000513232.1
3UTR CAA 90 bp AGGCAGCCTTTTGAAGTGCATCTGTGGCTAAGTCTGTGGACCAGGTaGTTAAAATCACTGAATCAGTTTGACAGTTATGAAGATAAGGAA +
Preference number: 2 (lower is better)
Translates to: RQPFEVHLWLSLWTR*LKSLNQFDSYEDKE
Trigger: TTCCTTATCTTCATAACTGTCAAACTGATTCAGTGATTTTAACAACCTGGTCCACAGACTTAGCCACAGATGCACTTCAAAAGGCTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649566.1
3UTR-3UTR TCA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTCAAAAGGTTACCCTTTaGTTATGGTCCCGAAGCAAA +
Preference number: 2 (lower is better)
Translates to: DKKGSASHIHSYSKIGFIQKVTL*LWSRSK
Trigger: TTTGCTTCGGGACCATAATCAAAGGGTAACCTTTTG...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649566.1
3UTR-3UTR GCA 90 bp GCTTCTCCTAACGATTCCCAACAATTGAAGTCCTTTGGGTCTGCTCTTAATGCTGATTTGCTGTATTGCTaGAACCTTAAACACACTGTA +
Preference number: 2 (lower is better)
Translates to: ASPNDSQQLKSFGSALNADLLYC*NLKHTV
Trigger: TACAGTGTGTTTAAGGTTGCAGCAATACAGCAAATC...AGCATTAAGAGCAGACCCAAAGGACTTCAATTGTTGGGAATCGTTAGGAGAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505578.5
ENST00000513232.1
3UTR-3UTR CCA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCCTCACGGTAACTGGGTaGCAATTTGAGAAGAAGGCA +
Preference number: 2 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFLTVTG*QFEKKA
Trigger: TGCCTTCTTCTCAAATTGCCACCCAGTTACCGTGAG...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649566.1
3UTR-3UTR TCA 90 bp GGTATTGAGCTACAGCCTCCTTATATTTGCCTAGGATTTGCTGTATTGCTGCAATTCTCAAGAGCTCTCTaGAAACATTTTTCTGCTTGT +
Preference number: 2 (lower is better)
Translates to: GIELQPPYICLGFAVLLQFSRAL*KHFSAC
Trigger: ACAAGCAGAAAAATGTTTTCAGAGAGCTCTTGAGAA...TTGCAGCAATACAGCAAATCCTAGGCAAATATAAGGAGGCTGTAGCTCAATACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513232.1
3UTR-3UTR TCA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCCTGATTGCATGGGTATaGATGATTATAATGTTCAGC +
Preference number: 2 (lower is better)
Translates to: MSREWHVLNLAEEIKGRILIAWV*MIIMFS
Trigger: GCTGAACATTATAATCATTCATACCCATGCAATCAG...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649566.1
3UTR-3UTR TCA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCAACTGGGTGGCAATTTaGGAAGAAGGCAACGAAAGT +
Preference number: 2 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFNWVAI*EEGNES
Trigger: ACTTTCGTTGCCTTCTTCTCAAATTGCCACCCAGTT...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649566.1
3UTR-3UTR GCA 90 bp AATAGCAGAAAACTTTGCCCATATATGTATCCAGTCTTGCAGCCTTCAGAAAGTTTGTGTAGCCTCCTCTaGTTAAGTATGCTTCTCCTA +
Preference number: 2 (lower is better)
Translates to: NSRKLCPYMYPVLQPSESLCSLL*LSMLLL
Trigger: TAGGAGAAGCATACTTAAGCAGAGGAGGCTACACAA...ACTTTCTGAAGGCTGCAAGACTGGATACATATATGGGCAAAGTTTTCTGCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513232.1
3UTR-3UTR TCA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCAAAAGGGACACTTCATaGAAAATGACAAGTGACCCC +
Preference number: 2 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFKRDTS*KMTSDP
Trigger: GGGGTCACTTGTCATTTTTCATGAAGTGTCCCTTTT...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649566.1
3UTR-3UTR GCA 90 bp AGGATAGCTAAAGCCATTTCCATATCTTCAAGCTCCACACTTAGGTCAACTGCTTTGGTAATGATATTCTaGAACTTCGGTATCTTTCTC +
Preference number: 2 (lower is better)
Translates to: RIAKAISISSSSTLRSTALVMIF*NFGIFL
Trigger: GAGAAAGATACCGAAGTTGCAGAATATCATTACCAA...AGCAGTTGACCTAAGTGTGGAGCTTGAAGATATGGAAATGGCTTTAGCTATCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513232.1
3UTR-3UTR CCA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCCTGTGGCTAAGTCTGTaGACCAGGTTGTTAAAATCA +
Preference number: 2 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFLWLSL*TRLLKS
Trigger: TGATTTTAACAACCTGGTCCACAGACTTAGCCACAG...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649566.1
3UTR-3UTR TCA 90 bp TTATATTTGCCTAGGATTTGCTGTATTGCTGCAACCTTAAACACACTGTATATGATGATCATCTGGTATTaGGCTACAGCCTCCTTATAT +
Preference number: 2 (lower is better)
Translates to: LYLPRICCIAATLNTLYMMIIWY*ATASLY
Trigger: ATATAAGGAGGCTGTAGCTCAATACCAGATGATCAT...CATATACAGTGTGTTTAAGGTTGCAGCAATACAGCAAATCCTAGGCAAATATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505578.5
ENST00000513232.1
3UTR-3UTR GCA 90 bp TTATATTTGCCTAGGATTTGCTGTATTGCTGCAACCTTAAACACACTGTATATGGATTTGCTGTATTGCTaGAACCTTAAACACACTGTA +
Preference number: 2 (lower is better)
Translates to: LYLPRICCIAATLNTLYMDLLYC*NLKHTV
Trigger: TACAGTGTGTTTAAGGTTGCAGCAATACAGCAAATC...CATATACAGTGTGTTTAAGGTTGCAGCAATACAGCAAATCCTAGGCAAATATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505578.5
ENST00000513232.1
3UTR-3UTR CAA 90 bp AGGATAGCTAAAGCCATTTCCATATCTTCAAGCTCCACACTTAGGTCAACTGCTAGGACTTCAAGGCTGTaGTGTAGCCTCCTCTGCTTA +
Preference number: 3 (lower is better)
Translates to: RIAKAISISSSSTLRSTARTSRL*CSLLCL
Trigger: TAAGCAGAGGAGGCTACACAACAGCCTTGAAGTCCT...AGCAGTTGACCTAAGTGTGGAGCTTGAAGATATGGAAATGGCTTTAGCTATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513232.1
3UTR CCA 72 bp GGAGGGCAAGAACTGAATACAAAGCATTTAGGTAGATaGAGCCAACCCGTTCTGGAAGAAAAAGCTGAAGTG +
Preference number: 3 (lower is better)
Translates to: GGQELNTKHLGR*SQPVLEEKAEV
Trigger: CACTTCAGCTTTTTCTTCCAGAACGGGTTGGCTCCATCTACCTAAATGCTTTGTATTCAGTTCTTGCCCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649566.1
3UTR CCA 72 bp GTGAGCAGAAATTATCTGAGGCTCACGGTAACTGGGTaGCAATTTGAGAAGAAGGCAACGAAAGTTAAGGGA +
Preference number: 3 (lower is better)
Translates to: VSRNYLRLTVTG*QFEKKATKVKG
Trigger: TCCCTTAACTTTCGTTGCCTTCTTCTCAAATTGCCACCCAGTTACCGTGAGCCTCAGATAATTTCTGCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649566.1
3UTR-3UTR CAA 90 bp TCATCTGGTATTGAGCTACAGCCTCCTTATATTTGCCTAGGATTTGCTGTATTGAGGACTTCAAGGCTGTaGTGTAGCCTCCTCTGCTTA +
Preference number: 3 (lower is better)
Translates to: SSGIELQPPYICLGFAVLRTSRL*CSLLCL
Trigger: TAAGCAGAGGAGGCTACACAACAGCCTTGAAGTCCT...CAATACAGCAAATCCTAGGCAAATATAAGGAGGCTGTAGCTCAATACCAGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505578.5
ENST00000513232.1
3UTR CCA 72 bp AGGCAGCCTTTTGAAGTGCATCTGTGGCTAAGTCTGTaGACCAGGTTGTTAAAATCACTGAATCAGTTTGAC +
Preference number: 3 (lower is better)
Translates to: RQPFEVHLWLSL*TRLLKSLNQFD
Trigger: GTCAAACTGATTCAGTGATTTTAACAACCTGGTCCACAGACTTAGCCACAGATGCACTTCAAAAGGCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649566.1
3UTR-3UTR CAA 90 bp GGTATTGAGCTACAGCCTCCTTATATTTGCCTAGGATTTGCTGTATTGCTGCAAAACGATTCCCAACAATaGAAGTCCTTTGGGTCTGCT +
Preference number: 3 (lower is better)
Translates to: GIELQPPYICLGFAVLLQNDSQQ*KSFGSA
Trigger: AGCAGACCCAAAGGACTTCAATTGTTGGGAATCGTT...TTGCAGCAATACAGCAAATCCTAGGCAAATATAAGGAGGCTGTAGCTCAATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505578.5
ENST00000513232.1
3UTR CCA 72 bp TATTGCTGCAACCTTAAACACACTGTATATGGATTCTaGGTTCAGCTCACTGGCTTTTGTGAAGGACTTCAA +
Preference number: 3 (lower is better)
Translates to: YCCNLKHTVYGF*VQLTGFCEGLQ
Trigger: TTGAAGTCCTTCACAAAAGCCAGTGAGCTGAACCCAGAATCCATATACAGTGTGTTTAAGGTTGCAGCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505578.5
ENST00000513232.1
3UTR-3UTR CAA 90 bp AAACACACTGTATATGGATTCTGGGTTCAGCTCACTGGCTTTTGTGAAGGACTTAATGATCATCTGGTATaGAGCTACAGCCTCCTTATA +
Preference number: 3 (lower is better)
Translates to: KHTVYGFWVQLTGFCEGLNDHLV*SYSLLI
Trigger: TATAAGGAGGCTGTAGCTCAATACCAGATGATCATT...AAGTCCTTCACAAAAGCCAGTGAGCTGAACCCAGAATCCATATACAGTGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505578.5
ENST00000513232.1
3UTR-3UTR CAA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTAGTCTGTGGACCAGGTaGTTAAAATCACTGAATCAG +
Preference number: 3 (lower is better)
Translates to: DKKGSASHIHSYSKIGFISLWTR*LKSLNQ
Trigger: CTGATTCAGTGATTTTAACAACCTGGTCCACAGACT...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649566.1
3UTR-3UTR CAA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCGTAAAAGATATTCTATaGTGCACCATGCAAGATGCA +
Preference number: 3 (lower is better)
Translates to: MSREWHVLNLAEEIKGRIVKDIL*CTMQDA
Trigger: TGCATCTTGCATGGTGCACAATAGAATATCTTTTAC...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
3UTR-3UTR CAA 90 bp TTATATTTGCCTAGGATTTGCTGTATTGCTGCAACCTTAAACACACTGTATATGAACGATTCCCAACAATaGAAGTCCTTTGGGTCTGCT +
Preference number: 3 (lower is better)
Translates to: LYLPRICCIAATLNTLYMNDSQQ*KSFGSA
Trigger: AGCAGACCCAAAGGACTTCAATTGTTGGGAATCGTT...CATATACAGTGTGTTTAAGGTTGCAGCAATACAGCAAATCCTAGGCAAATATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505578.5
ENST00000513232.1
3UTR-3UTR CAA 90 bp TTATATTTGCCTAGGATTTGCTGTATTGCTGCAACCTTAAACACACTGTATATGTATATGTATCCAGTCTaGCAGCCTTCAGAAAGTGGG +
Preference number: 3 (lower is better)
Translates to: LYLPRICCIAATLNTLYMYMYPV*QPSESG
Trigger: CCCACTTTCTGAAGGCTGCAAGACTGGATACATATA...CATATACAGTGTGTTTAAGGTTGCAGCAATACAGCAAATCCTAGGCAAATATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513232.1
3UTR TCA 72 bp AGAAATGAGCAGAGAATGGCACGTGTTGAACCTTGCTaGAGAAATAAAGGGAAGAATCATCATTGGAGTAAT +
Preference number: 3 (lower is better)
Translates to: RNEQRMARVEPC*RNKGKNHHWSN
Trigger: ATTACTCCAATGATGATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCATTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp CTGCTCTTAATGCTGCCTGTAAATCAGCCACTGCTTGAGAATGCTGACCAGCTTAAGCCAGGCCCATTTTaGCGTTCCAGCACTTGCCTT +
Preference number: 4 (lower is better)
Translates to: LLLMLPVNQPLLENADQLKPGPF*RSSTCL
Trigger: AAGGCAAGTGCTGGAACGGCAAAATGGGCCTGGCTT...AAGCTGGTCAGCATTCTCAAGCAGTGGCTGATTTACAGGCAGCATTAAGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505578.5
CDS-3UTR TCA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCTGGGCTTCTGCCAGATaGTACCATCCACTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: MSREWHVLNLAEEIKGRIWASAR*YHPLVQ
Trigger: CTGCACAAGTGGATGGTATCATCTGGCAGAAGCCCA...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp GGTCAACTGCTGCAGCTCCAGATTCAGCATCAGTGTCATCTAATTCAAAGGCTTAAAGCCTCAAGGGCATaGACTTCAGCTTTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: GQLLQLQIQHQCHLIQRLKASRA*TSALQL
Trigger: AAGCTGCAAAGCTGAAGTTCATGCCCTTGAGGCTTT...AAGCCTTTGAATTAGATGACACTGATGCTGAATCTGGAGCTGCAGCAGTTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513232.1
CDS-3UTR GCA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCAAGCCAGGCCCATTTTaGCGTTCCAGCACTTGCCTT +
Preference number: 4 (lower is better)
Translates to: MSREWHVLNLAEEIKGRIKPGPF*RSSTCL
Trigger: AAGGCAAGTGCTGGAACGGCAAAATGGGCCTGGCTT...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCACATGTGCCAGCCACTaGCAAGCTGGAACAGAGGTT +
Preference number: 4 (lower is better)
Translates to: MSREWHVLNLAEEIKGRITCASH*QAGTEV
Trigger: AACCTCTGTTCCAGCTTGGCAGTGGCTGGCACATGT...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CCA 90 bp TTCTGGGTTCAGCTCACTGGCTTTTGTGAAGGACTTCAAGGCTGTTGTGTAGCCACTGTATATGGATTCTaGGTTCAGCTCACTGGCTTT +
Preference number: 4 (lower is better)
Translates to: FWVQLTGFCEGLQGCCVATVYGF*VQLTGF
Trigger: AAAGCCAGTGAGCTGAACCCAGAATCCATATACAGT...GGCTACACAACAGCCTTGAAGTCCTTCACAAAAGCCAGTGAGCTGAACCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505578.5
ENST00000513232.1
CDS-3UTR TCA 90 bp TCCATATCTTCAAGCTCCACACTTAGGTCAACTGCTGCAGCTCCAGATTCAGCACCAGCACTTGCCTTTTaGGTTACTGTTGTTAGGATA +
Preference number: 4 (lower is better)
Translates to: SISSSSTLRSTAAAPDSAPALAF*VTVVRI
Trigger: TATCCTAACAACAGTAACTCAAAAGGCAAGTGCTGG...TGCTGAATCTGGAGCTGCAGCAGTTGACCTAAGTGTGGAGCTTGAAGATATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513232.1
CDS-3UTR GCA 90 bp TCCATATCTTCAAGCTCCACACTTAGGTCAACTGCTGCAGCTCCAGATTCAGCAATATGTATCCAGTCTTaGAGCCTTCAGAAAGTGGGT +
Preference number: 4 (lower is better)
Translates to: SISSSSTLRSTAAAPDSAICIQS*SLQKVG
Trigger: ACCCACTTTCTGAAGGCTGCAAGACTGGATACATAT...TGCTGAATCTGGAGCTGCAGCAGTTGACCTAAGTGTGGAGCTTGAAGATATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513232.1
CDS-3UTR GCA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTGGATTGATACACATGTaGCAGCCACTGCCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: DKKGSASHIHSYSKIGFIGLIHM*QPLPSW
Trigger: CCAGCTTGGCAGTGGCTGGCACATGTGTATCAATCC...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp TCATCTGGTATTGAGCTACAGCCTCCTTATATTTGCCTAGGATTTGCTGTATTGATGCTGCTCAGCCACTaGTTGAGAATGCTGACCAGC +
Preference number: 4 (lower is better)
Translates to: SSGIELQPPYICLGFAVLMLLSH*LRMLTS
Trigger: GCTGGTCAGCATTCTCAAGCAGTGGCTGAGCAGCAT...CAATACAGCAAATCCTAGGCAAATATAAGGAGGCTGTAGCTCAATACCAGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513232.1
CDS-3UTR CCA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTCTCCAACTGCCCCGTTaGGATGCCAATTGTAGACTC +
Preference number: 4 (lower is better)
Translates to: DKKGSASHIHSYSKIGFILQLPR*DANCRL
Trigger: GAGTCTACAATTGGCATCCCAACGGGGCAGTTGGAG...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp AGTCCTTTGGGTCTGCTCTTAATGCTGCCTGTAAATCAGCCACTGCTTGAGAATCTTTCAGCCAGGAACTaGGTCAATTTTCTCCATAGT +
Preference number: 4 (lower is better)
Translates to: SPLGLLLMLPVNQPLLENLSARN*VNFLHS
Trigger: ACTATGGAGAAAATTGACTCAGTTCCTGGCTGAAAG...ATTCTCAAGCAGTGGCTGATTTACAGGCAGCATTAAGAGCAGACCCAAAGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505578.5
CDS-3UTR TCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAGAAACGGCATGGAGATaGGGGCTATGCAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKETAWR*GLCRQP
Trigger: AGGCTGCCTGCATAGCCCTCATCTCCATGCCGTTTC...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649566.1
3UTR CAA 72 bp CTGCTTAAGTATGCTTCTCCTAACGATTCCCAACAATaGAAGTCCTTTGGGTCTGCTCTTAATGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: LLKYASPNDSQQ*KSFGSALNAAC
Trigger: ACAGGCAGCATTAAGAGCAGACCCAAAGGACTTCAATTGTTGGGAATCGTTAGGAGAAGCATACTTAAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505578.5
3UTR CAA 72 bp CTGCTTAAGTATGCTTCTCCTAACGATTCCCAACAATaGAAGTCCTTTGGGTCTGCTCTTAATGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: LLKYASPNDSQQ*KSFGSALNAAQ
Trigger: CTGAGCAGCATTAAGAGCAGACCCAAAGGACTTCAATTGTTGGGAATCGTTAGGAGAAGCATACTTAAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513232.1
CDS-3UTR TCA 90 bp AAACACACTGTATATGGATTCTGGGTTCAGCTCACTGGCTTTTGTGAAGGACTTTGCAGCTTCATCAAATaGACCTTTGTTCCGATAGGC +
Preference number: 4 (lower is better)
Translates to: KHTVYGFWVQLTGFCEGLCSFIK*TFVPIG
Trigger: GCCTATCGGAACAAAGGTTCATTTGATGAAGCTGCA...AAGTCCTTCACAAAAGCCAGTGAGCTGAACCCAGAATCCATATACAGTGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513232.1
CDS-3UTR TCA 90 bp AGTCCTTTGGGTCTGCTCTTAATGCTGCCTGTAAATCAGCCACTGCTTGAGAATATGATCATCTGGTATTaGGCTACAGCCTCCTTATAT +
Preference number: 4 (lower is better)
Translates to: SPLGLLLMLPVNQPLLENMIIWY*ATASLY
Trigger: ATATAAGGAGGCTGTAGCTCAATACCAGATGATCAT...ATTCTCAAGCAGTGGCTGATTTACAGGCAGCATTAAGAGCAGACCCAAAGGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505578.5
CDS-3UTR TCA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTGGGATTGAGCCATTTTaGAAGCCTCATGAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: DKKGSASHIHSYSKIGFIGIEPF*KPHELA
Trigger: AGCAAGCTCATGAGGCTTTCAAAATGGCTCAATCCC...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTTCTATCCTCTTTGGCTaGGTGTTGTTCACTAAGGCC +
Preference number: 4 (lower is better)
Translates to: DKKGSASHIHSYSKIGFISILFG*VLFTKA
Trigger: GGCCTTAGTGAACAACACTCAGCCAAAGAGGATAGA...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTACCAGTGACAGCTTGTaGGAGAGACCACTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: DKKGSASHIHSYSKIGFITSDSL*ERPLFK
Trigger: CTTGAAAAGTGGTCTCTCTCACAAGCTGTCACTGGT...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAGCACCTGCTCCTATTaGCACTGGAGCAGATGCTCC +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRSTCSY*HWSRCS
Trigger: GGAGCATCTGCTCCAGTGTCAATAGGAGCAGGTGCT...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp AAACACACTGTATATGGATTCTGGGTTCAGCTCACTGGCTTTTGTGAAGGACTTAAGCTCTTCATTTTCTaGACCTTGTTCCTGCCGTGT +
Preference number: 4 (lower is better)
Translates to: KHTVYGFWVQLTGFCEGLKLFIF*TLFLPC
Trigger: ACACGGCAGGAACAAGGTGCAGAAAATGAAGAGCTT...AAGTCCTTCACAAAAGCCAGTGAGCTGAACCCAGAATCCATATACAGTGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505578.5
CDS-3UTR GCA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCAAGCTCTTCATTTTCTaGACCTTGTTCCTGCCGTGT +
Preference number: 4 (lower is better)
Translates to: MSREWHVLNLAEEIKGRIKLFIF*TLFLPC
Trigger: ACACGGCAGGAACAAGGTGCAGAAAATGAAGAGCTT...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCGATACCATCCACTTGTaGAGACAGGGCTTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: MSREWHVLNLAEEIKGRIDTIHL*RQGFPL
Trigger: TAAAGGAAAGCCCTGTCTGCACAAGTGGATGGTATC...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCTTTGACTTGGGCTTCTaGCAGATGATACCATCCACT +
Preference number: 4 (lower is better)
Translates to: MSREWHVLNLAEEIKGRIFDLGF*QMIPST
Trigger: AGTGGATGGTATCATCTGGCAGAAGCCCAAGTCAAA...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp CACTTAGGTCAACTGCTGCAGCTCCAGATTCAGCATCAGTGTCATCTAATTCAATTGTGTAGCCTCCTCTaGTTAAGTATGCTTCTCCTA +
Preference number: 4 (lower is better)
Translates to: HLGQLLQLQIQHQCHLIQLCSLL*LSMLLL
Trigger: TAGGAGAAGCATACTTAAGCAGAGGAGGCTACACAA...TTGAATTAGATGACACTGATGCTGAATCTGGAGCTGCAGCAGTTGACCTAAGTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513232.1
CDS-3UTR GCA 90 bp ATGGATTCTGGGTTCAGCTCACTGGCTTTTGTGAAGGACTTCAAGGCTGTTGTGGATTTGCTGTATTGCTaGAACCTTAAACACACTGTA +
Preference number: 4 (lower is better)
Translates to: MDSGFSSLAFVKDFKAVVDLLYC*NLKHTV
Trigger: TACAGTGTGTTTAAGGTTGCAGCAATACAGCAAATC...CACAACAGCCTTGAAGTCCTTCACAAAAGCCAGTGAGCTGAACCCAGAATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505578.5
ENST00000513232.1
CDS-3UTR GCA 90 bp TCCATATCTTCAAGCTCCACACTTAGGTCAACTGCTGCAGCTCCAGATTCAGCATATTTGCCTAGGATTTaGTGTATTGCTGCAACCTTA +
Preference number: 4 (lower is better)
Translates to: SISSSSTLRSTAAAPDSAYLPRI*CIAATL
Trigger: TAAGGTTGCAGCAATACAGCAAATCCTAGGCAAATA...TGCTGAATCTGGAGCTGCAGCAGTTGACCTAAGTGTGGAGCTTGAAGATATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513232.1
CDS-3UTR GCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAGCTTCCCACTCCAACTaGCCCGTTGGGATGCCAATT +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKASHSN*PVGMPI
Trigger: AATTGGCATCCCAACGGGGCAGTTGGAGTGGGAAGC...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAGCTTCCCACTCCAACTaGCCCGTTGGGATGCCAATT +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRASHSN*PVGMPI
Trigger: AATTGGCATCCCAACGGGGCAGTTGGAGTGGGAAGC...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATGGGCTTCTGCCAGATaGTACCATCCACTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRWASAR*YHPLVQ
Trigger: CTGCACAAGTGGATGGTATCATCTGGCAGAAGCCCA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTCAGAGCTTGACTGCATaGAAGAACAGCTTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: DKKGSASHIHSYSKIGFIQSLTA*KNSFFR
Trigger: CCTAAAGAAGCTGTTCTTTCATGCAGTCAAGCTCTG...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp AATAGCAGAAAACTTTGCCCATATATGTATCCAGTCTTGCAGCCTTCAGAAAGTGATAGGCCAAGCTTTTaGGAACCAAAAGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: NSRKLCPYMYPVLQPSESDRPSF*EPKVLG
Trigger: TCCCAGGACTTTTGGTTCTCAAAAGCTTGGCCTATC...ACTTTCTGAAGGCTGCAAGACTGGATACATATATGGGCAAAGTTTTCTGCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513232.1
CDS-3UTR TCA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTTGCAGCTTCATCAAATaGACCTTTGTTCCGATAGGC +
Preference number: 4 (lower is better)
Translates to: DKKGSASHIHSYSKIGFICSFIK*TFVPIG
Trigger: GCCTATCGGAACAAAGGTTCATTTGATGAAGCTGCA...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAAAAGCCTCAAGGGCATaGACTTCAGCTAGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKKASRA*TSARSG
Trigger: CCCTGACCTAGCTGAAGTTCATGCCCTTGAGGCTTT...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAGCCTCAAGGGCATaGACTTCAGCTAGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRKASRA*TSARSG
Trigger: CCCTGACCTAGCTGAAGTTCATGCCCTTGAGGCTTT...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp TTAGGTCAACTGCTGCAGCTCCAGATTCAGCATCAGTGTCATCTAATTCAAAGGTTGTCTCTTCACCCATaGACCAGTATGTTAATCCAA +
Preference number: 4 (lower is better)
Translates to: LGQLLQLQIQHQCHLIQRLSLHP*TSMLIQ
Trigger: TTGGATTAACATACTGGTTCATGGGTGAAGAGACAA...CCTTTGAATTAGATGACACTGATGCTGAATCTGGAGCTGCAGCAGTTGACCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513232.1
CDS-3UTR TCA 90 bp AAACACACTGTATATGGATTCTGGGTTCAGCTCACTGGCTTTTGTGAAGGACTTCCAGCACTTGCCTTTTaGGTTACTGTTGTTAGGATA +
Preference number: 4 (lower is better)
Translates to: KHTVYGFWVQLTGFCEGLPALAF*VTVVRI
Trigger: TATCCTAACAACAGTAACTCAAAAGGCAAGTGCTGG...AAGTCCTTCACAAAAGCCAGTGAGCTGAACCCAGAATCCATATACAGTGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505578.5
ENST00000513232.1
CDS-3UTR TCA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCCCAGCACTTGCCTTTTaGGTTACTGTTGTTAGGATA +
Preference number: 4 (lower is better)
Translates to: MSREWHVLNLAEEIKGRIPALAF*VTVVRI
Trigger: TATCCTAACAACAGTAACTCAAAAGGCAAGTGCTGG...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp TCTCCTAACGATTCCCAACAATTGAAGTCCTTTGGGTCTGCTCTTAATGCTGCTATGATCATCTGGTATTaGGCTACAGCCTCCTTATAT +
Preference number: 4 (lower is better)
Translates to: SPNDSQQLKSFGSALNAAMIIWY*ATASLY
Trigger: ATATAAGGAGGCTGTAGCTCAATACCAGATGATCAT...AGCAGCATTAAGAGCAGACCCAAAGGACTTCAATTGTTGGGAATCGTTAGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513232.1
CDS-3UTR TCA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCTCACCAGGGTTGCTGTaGACAGCTTTAGATATTTGT +
Preference number: 4 (lower is better)
Translates to: MSREWHVLNLAEEIKGRISPGLL*TALDIC
Trigger: ACAAATATCTAAAGCTGTTCACAGCAACCCTGGTGA...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTCCCTTTGCATTTCGTTaGGCATACTGTGCAACAACT +
Preference number: 4 (lower is better)
Translates to: DKKGSASHIHSYSKIGFIPFAFR*AYCATT
Trigger: AGTTGTTGCACAGTATGCTCAACGAAATGCAAAGGG...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCAGTTTATCATCAGCGTaGCAGGCTGCCATTAGCCCA +
Preference number: 4 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFSLSSA*QAAISP
Trigger: TGGGCTAATGGCAGCCTGTCACGCTGATGATAAACT...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCTGTGAGGACAATCTCTaGTTCAGTTCCAATGCTCTT +
Preference number: 4 (lower is better)
Translates to: MSREWHVLNLAEEIKGRICEDNL*FSSNAL
Trigger: AAGAGCATTGGAACTGAATCAGAGATTGTCCTCACA...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTAACTGGGTGGCAATTTaGGAAGAAGGCAACGAAAGT +
Preference number: 4 (lower is better)
Translates to: DKKGSASHIHSYSKIGFINWVAI*EEGNES
Trigger: ACTTTCGTTGCCTTCTTCTCAAATTGCCACCCAGTT...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAAAGCCAGGCCCATTTTaGCGTTCCAGCACTTGCCTT +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKKPGPF*RSSTCL
Trigger: AAGGCAAGTGCTGGAACGGCAAAATGGGCCTGGCTT...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp TTATATTTGCCTAGGATTTGCTGTATTGCTGCAACCTTAAACACACTGTATATGAAGCCAGGCCCATTTTaGCGTTCCAGCACTTGCCTT +
Preference number: 4 (lower is better)
Translates to: LYLPRICCIAATLNTLYMKPGPF*RSSTCL
Trigger: AAGGCAAGTGCTGGAACGGCAAAATGGGCCTGGCTT...CATATACAGTGTGTTTAAGGTTGCAGCAATACAGCAAATCCTAGGCAAATATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505578.5
ENST00000513232.1
CDS-3UTR GCA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCTTGTGTAGCCTCCTCTaGTTAAGTATGCTTCTCCTA +
Preference number: 4 (lower is better)
Translates to: MSREWHVLNLAEEIKGRILCSLL*LSMLLL
Trigger: TAGGAGAAGCATACTTAAGCAGAGGAGGCTACACAA...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp AGTCCTTTGGGTCTGCTCTTAATGCTGCCTGTAAATCAGCCACTGCTTGAGAATTATTTGCCTAGGATTTaGTGTATTGCTGCAACCTTA +
Preference number: 4 (lower is better)
Translates to: SPLGLLLMLPVNQPLLENYLPRI*CIAATL
Trigger: TAAGGTTGCAGCAATACAGCAAATCCTAGGCAAATA...ATTCTCAAGCAGTGGCTGATTTACAGGCAGCATTAAGAGCAGACCCAAAGGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505578.5
CDS-3UTR GCA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCGACACATCAGCTCGATaGTGTAGAGCACAAGTAAAA +
Preference number: 4 (lower is better)
Translates to: MSREWHVLNLAEEIKGRIDTSAR*CRAQVK
Trigger: TTTTACTTGTGCTCTACAGCATCGAGCTGATGTGTC...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCATTCACTTTAGATGGTaGGACAGCATACAGACAGGT +
Preference number: 4 (lower is better)
Translates to: MSREWHVLNLAEEIKGRIIHFRW*DSIQTG
Trigger: ACCTGTCTGTATGCTGTCGCACCATCTAAAGTGAAT...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAACATGTGCCAGCCACTaGCAAGCTGGAACAGAGGTT +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRTCASH*QAGTEV
Trigger: AACCTCTGTTCCAGCTTGGCAGTGGCTGGCACATGT...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAGGATTGATACACATGTaGCAGCCACTGCCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRGLIHM*QPLPSW
Trigger: CCAGCTTGGCAGTGGCTGGCACATGTGTATCAATCC...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCTCTGTAACACATCTCTaGAGCTCTCATCATTCCTTG +
Preference number: 4 (lower is better)
Translates to: MSREWHVLNLAEEIKGRISVTHL*SSHHSL
Trigger: CAAGGAATGATGAGAGCTGCAGAGATGTGTTACAGA...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGACTCCAACTGCCCCGTTaGGATGCCAATTGTAGACTC +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRLQLPR*DANCRL
Trigger: GAGTCTACAATTGGCATCCCAACGGGGCAGTTGGAG...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTCTTTCAGCCAGGAACTaGGTCAATTTTCTCCATAGT +
Preference number: 4 (lower is better)
Translates to: DKKGSASHIHSYSKIGFILSARN*VNFLHS
Trigger: ACTATGGAGAAAATTGACTCAGTTCCTGGCTGAAAG...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTTCCTTTTTGGTGAAATaGATCAAAGCCTCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: DKKGSASHIHSYSKIGFISFLVK*IKASRA
Trigger: TGCCCTTGAGGCTTTGATTCATTTCACCAAAAAGGA...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCTGTTTTCCTTCTTTCTaGCCTAGAAGGACTCCTAAA +
Preference number: 4 (lower is better)
Translates to: MSREWHVLNLAEEIKGRICFPSF*PRRTPK
Trigger: TTTAGGAGTCCTTCTAGGTCAGAAAGAAGGAAAACA...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTAGTAACCCAACATTGTaGAAGCTGGGGCATAATTCT +
Preference number: 4 (lower is better)
Translates to: DKKGSASHIHSYSKIGFISNPTL*KLGHNS
Trigger: AGAATTATGCCCCAGCTTTCACAATGTTGGGTTACT...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCCTTCCCATAGCCAACTaGTTTACCGCAGTGTACAGT +
Preference number: 4 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFLPIAN*FTAVYS
Trigger: ACTGTACACTGCGGTAAATCAGTTGGCTATGGGAAG...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTTTTTTCATCTTCTGCTaGACTGCTTCCCATAGCCAA +
Preference number: 4 (lower is better)
Translates to: DKKGSASHIHSYSKIGFIFFIFC*TASHSQ
Trigger: TTGGCTATGGGAAGCAGTTCAGCAGAAGATGAAAAA...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
41% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAAGTTTATCATCAGCGTaGCAGGCTGCCATTAGCCCA +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKSLSSA*QAAISP
Trigger: TGGGCTAATGGCAGCCTGTCACGCTGATGATAAACT...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATGGGAGTGGCTTTTGTaGCTCCAGGAGTGGTTTACA +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRWEWLL*LQEWFT
Trigger: TGTAAACCACTCCTGGAGTCACAAAAGCCACTCCCA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATCCCATCACTGGAGATaGAAAAGCACAGGCTGGACA +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRSHHWR*KSTGWT
Trigger: TGTCCAGCCTGTGCTTTTTCATCTCCAGTGATGGGA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAGCTGAAGTGTTTTCCTaGGGAAACGGCATGGAGATG +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKAEVFS*GNGMEM
Trigger: CATCTCCATGCCGTTTCCTCAGGAAAACACTTCAGC...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAAGAAAAACCTGGGTTTaGGGTCCCTGGAAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKRKTWV*GPWKAE
Trigger: TTCTGCCTTCCAGGGACCTCAAACCCAGGTTTTTCT...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAGCAGGAGAATCACTTaGACCCAGAAGGCGGAGATT +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRSRRIT*TQKAEI
Trigger: AATCTCCGCCTTCTGGGTTCAAGTGATTCTCCTGCT...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCACACTTCATGAAAAATaGCAAGTGACCCCAAACAGA +
Preference number: 4 (lower is better)
Translates to: MSREWHVLNLAEEIKGRITLHEK*QVTPNR
Trigger: TCTGTTTGGGGTCACTTGTCATTTTTCATGAAGTGT...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTAAAAGGGACACTTCATaGAAAATGACAAGTGACCCC +
Preference number: 4 (lower is better)
Translates to: DKKGSASHIHSYSKIGFIKRDTS*KMTSDP
Trigger: GGGGTCACTTGTCATTTTTCATGAAGTGTCCCTTTT...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATCCATCTGGAGCAGATaGTCCTCTTCTACAAACGCC +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRSIWSR*SSSTNA
Trigger: GGCGTTTGTAGAAGAGGAGCATCTGCTCCAGATGGA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358746.7
CDS-3UTR GCA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCAATACCACTGTAACATaGAACCACACCAAGAGCATT +
Preference number: 4 (lower is better)
Translates to: MSREWHVLNLAEEIKGRINTTVT*NHTKSI
Trigger: AATGCTCTTGGTGTGGTTGCATGTTACAGTGGTATT...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAGACAGTGTAGCATCCTaGATTGCCAACCCTAGAGCA +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKDSVAS*IANPRA
Trigger: TGCTCTAGGGTTGGCAATGCAGGATGCTACACTGTC...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTGACAGTGTAGCATCCTaGATTGCCAACCCTAGAGCA +
Preference number: 4 (lower is better)
Translates to: FSQIWETPDENSVQLLTSDSVAS*IANPRA
Trigger: TGCTCTAGGGTTGGCAATGCAGGATGCTACACTGTC...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATTTGCACAGCCACACTaGGGCCTTGGAGTGCATAAA +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRFAQPH*GLGVHK
Trigger: TTTATGCACTCCAAGGCCGCAGTGTGGCTGTGCAAA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTTTTGCACAGCCACACTaGGGCCTTGGAGTGCATAAA +
Preference number: 4 (lower is better)
Translates to: FSQIWETPDENSVQLLTSFAQPH*GLGVHK
Trigger: TTTATGCACTCCAAGGCCGCAGTGTGGCTGTGCAAA...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CCA 90 bp TCATCTGGTATTGAGCTACAGCCTCCTTATATTTGCCTAGGATTTGCTGTATTGACTGTATATGGATTCTaGGTTCAGCTCACTGGCTTT +
Preference number: 4 (lower is better)
Translates to: SSGIELQPPYICLGFAVLTVYGF*VQLTGF
Trigger: AAAGCCAGTGAGCTGAACCCAGAATCCATATACAGT...CAATACAGCAAATCCTAGGCAAATATAAGGAGGCTGTAGCTCAATACCAGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505578.5
ENST00000513232.1
CDS-3UTR CCA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCGAGCTGCCTTCTGAATaGTCTTTAGTGCAGTATTTT +
Preference number: 4 (lower is better)
Translates to: MSREWHVLNLAEEIKGRIELPSE*SLVQYF
Trigger: AAAATACTGCACTAAAGACCATTCAGAAGGCAGCTC...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAGATAGCAGGATCACCTaGAGAAAGGAGAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKDSRIT*RKESCL
Trigger: AAGGCAGCTCTCCTTTCTCCAGGTGATCCTGCTATC...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CCA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTGATAGCAGGATCACCTaGAGAAAGGAGAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: FSQIWETPDENSVQLLTSDSRIT*RKESCL
Trigger: AAGGCAGCTCTCCTTTCTCCAGGTGATCCTGCTATC...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CCA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCGGAGCCAACCCGTTCTaGAAGAAAAAGCTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFGANPF*KKKLKC
Trigger: ACACTTCAGCTTTTTCTTCCAGAACGGGTTGGCTCC...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAGATAGGCCAAGCTTTTaGGAACCAAAAGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKDRPSF*EPKVLG
Trigger: TCCCAGGACTTTTGGTTCTCAAAAGCTTGGCCTATC...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAGGGATTGAGCCATTTTaGAAGCCTCATGAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKGIEPF*KPHELA
Trigger: AGCAAGCTCATGAGGCTTTCAAAATGGCTCAATCCC...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGACACTTCAAGGGGTGTTaGCTTAAAAGCCTGGATAGC +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRHFKGC*LKSLDS
Trigger: GCTATCCAGGCTTTTAAGTCAACACCCCTTGAAGTG...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAACACTTCAAGGGGTGTTaGCTTAAAAGCCTGGATAGC +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKHFKGC*LKSLDS
Trigger: GCTATCCAGGCTTTTAAGTCAACACCCCTTGAAGTG...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAGAGTGCATAAATCGCTaGTGTAAGAAGGCACCTCTG +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRECINR*CKKAPL
Trigger: CAGAGGTGCCTTCTTACATCAGCGATTTATGCACTC...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAGAGTGCATAAATCGCTaGTGTAAGAAGGCACCTCTG +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKECINR*CKKAPL
Trigger: CAGAGGTGCCTTCTTACATCAGCGATTTATGCACTC...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGACTTCCCATAGCCAACTaGTTTACCGCAGTGTACAGT +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRLPIAN*FTAVYS
Trigger: ACTGTACACTGCGGTAAATCAGTTGGCTATGGGAAG...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAGGAGAGCTGCCTTCTaGATGGTCTTTAGTGCAGTA +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRRRAAF*MVFSAV
Trigger: TACTGCACTAAAGACCATTCAGAAGGCAGCTCTCCT...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTAGGAGAGCTGCCTTCTaGATGGTCTTTAGTGCAGTA +
Preference number: 4 (lower is better)
Translates to: FSQIWETPDENSVQLLTSRRAAF*MVFSAV
Trigger: TACTGCACTAAAGACCATTCAGAAGGCAGCTCTCCT...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATCTATCCTCTTTGGCTaGGTGTTGTTCACTAAGGCC +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRSILFG*VLFTKA
Trigger: GGCCTTAGTGAACAACACTCAGCCAAAGAGGATAGA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAACCAGTGACAGCTTGTaGGAGAGACCACTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRTSDSL*ERPLFK
Trigger: CTTGAAAAGTGGTCTCTCTCACAAGCTGTCACTGGT...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAATCATTCCTTGGGATTaGTACACATGTGCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKIIPWD*YTCASH
Trigger: GTGGCTGGCACATGTGTATCAATCCCAAGGAATGAT...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAATCATTCCTTGGGATTaGTACACATGTGCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRIIPWD*YTCASH
Trigger: GTGGCTGGCACATGTGTATCAATCCCAAGGAATGAT...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTCCCCCATTTTGCGTTTaGATTGTAACAAAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: DKKGSASHIHSYSKIGFIPPFCV*IVTKLV
Trigger: TACAAGCTTTGTTACAATTCAAACGCAAAATGGGGG...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAATGAGCCACATTTCCTaGTACAACACCTCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRMSHIS*YNTSLC
Trigger: GCAAAGGGAGGTGTTGTAGCAGGAAATGTGGCTCAT...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTATGAGCCACATTTCCTaGTACAACACCTCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: FSQIWETPDENSVQLLTSMSHIS*YNTSLC
Trigger: GCAAAGGGAGGTGTTGTAGCAGGAAATGTGGCTCAT...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAGGCATACCTTTAAAATaGAGAGTCCTAGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRGIPLK*RVLGLS
Trigger: GGACAGGCCTAGGACTCTGCATTTTAAAGGTATGCC...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CCA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTAACATTCACTTTAGATaGTGCGACAGCATACAGACA +
Preference number: 4 (lower is better)
Translates to: DKKGSASHIHSYSKIGFINIHFR*CDSIQT
Trigger: TGTCTGTATGCTGTCGCACCATCTAAAGTGAATGTT...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CCA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCTGGAGGATGTTGTACTaGTACAGCTCTGTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFWRMLY*YSSVSL
Trigger: CAGAGAAACAGAGCTGTACCAGTACAACATCCTCCA...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CCA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCTATCATATTCACCAGTaGAACATAACAATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: MSREWHVLNLAEEIKGRIYHIHQ*NITICR
Trigger: ACGGCAGATTGTTATGTTCCACTGGTGAATATGATA...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CCA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTCTCTTGAACCAAAGATaGCCAGTGATCATTGGAAAT +
Preference number: 4 (lower is better)
Translates to: DKKGSASHIHSYSKIGFILLNQR*PVIIGN
Trigger: ATTTCCAATGATCACTGGCCATCTTTGGTTCAAGAG...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CCA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCGAAATGAGCAGAGAATaGCACGTGTTGAACCTTGCT +
Preference number: 4 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFEMSRE*HVLNLA
Trigger: AGCAAGGTTCAACACGTGCCATTCTCTGCTCATTTC...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAATTTGAAGTGCATCTGTaGCTAAGTCTGTGGACCAGG +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKFEVHL*LSLWTR
Trigger: CCTGGTCCACAGACTTAGCCACAGATGCACTTCAAA...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CCA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTCTCACGGTAACTGGGTaGCAATTTGAGAAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: FSQIWETPDENSVQLLTSLTVTG*QFEKKA
Trigger: TGCCTTCTTCTCAAATTGCCACCCAGTTACCGTGAG...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGACAGAGCTTGACTGCATaGAAGAACAGCTTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRQSLTA*KNSFFR
Trigger: CCTAAAGAAGCTGTTCTTTCATGCAGTCAAGCTCTG...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAACGATCTTCAGAGCTTaGCTGCATGAAAGAACAGCT +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRTIFRA*LHERTA
Trigger: AGCTGTTCTTTCATGCAGTCAAGCTCTGAAGATCGT...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTACGATCTTCAGAGCTTaGCTGCATGAAAGAACAGCT +
Preference number: 4 (lower is better)
Translates to: FSQIWETPDENSVQLLTSTIFRA*LHERTA
Trigger: AGCTGTTCTTTCATGCAGTCAAGCTCTGAAGATCGT...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATGCAGCTTCATCAAATaGACCTTTGTTCCGATAGGC +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRCSFIK*TFVPIG
Trigger: GCCTATCGGAACAAAGGTTCATTTGATGAAGCTGCA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAGATGGATCAAGGGATTaGGCCATTTTGAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRDGSRD*AILKAS
Trigger: TGAGGCTTTCAAAATGGCTCAATCCCTTGATCCATC...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAACCCTTTGCATTTCGTTaGGCATACTGTGCAACAACT +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKPFAFR*AYCATT
Trigger: AGTTGTTGCACAGTATGCTCAACGAAATGCAAAGGG...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAAGCTGGAACAGAGGTTaGGTTGGACATGACTGTTTT +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKSWNRG*VGHDCF
Trigger: AAAACAGTCATGTCCAACTCAACCTCTGTTCCAGCT...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAGCTGGAACAGAGGTTaGGTTGGACATGACTGTTTT +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRSWNRG*VGHDCF
Trigger: AAAACAGTCATGTCCAACTCAACCTCTGTTCCAGCT...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAACCAAAGATGGCCAGTaGTCATTGGAAATGTTAGCC +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRTKDGQ*SLEMLA
Trigger: GGCTAACATTTCCAATGATCACTGGCCATCTTTGGT...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAACCAAAGATGGCCAGTaGTCATTGGAAATGTTAGCC +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKTKDGQ*SLEMLA
Trigger: GGCTAACATTTCCAATGATCACTGGCCATCTTTGGT...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATTGGGATACCCAGGCTaGTATACCACTCTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRLGYPG*YTTLSK
Trigger: TTTGGAAAGAGTGGTATATCAGCCTGGGTATCCCAA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCGATCCACAAGTTTCTTaGAGACATCACACCACTTCT +
Preference number: 4 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFDPQVS*RHHTTS
Trigger: AGAAGTGGTGTGATGTCTGCAAGAAACTTGTGGATC...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCTCTGCACCTTGTTCCTaGCGTGTTTTTATCAACTTG +
Preference number: 4 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFSAPCS*RVFINL
Trigger: CAAGTTGATAAAAACACGGCAGGAACAAGGTGCAGA...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAAAGCTCTTCATTTTCTaGACCTTGTTCCTGCCGTGT +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKKLFIF*TLFLPC
Trigger: ACACGGCAGGAACAAGGTGCAGAAAATGAAGAGCTT...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAGATACCATCCACTTGTaGAGACAGGGCTTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKDTIHL*RQGFPL
Trigger: TAAAGGAAAGCCCTGTCTGCACAAGTGGATGGTATC...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATTTGACTTGGGCTTCTaGCAGATGATACCATCCACT +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRFDLGF*QMIPST
Trigger: AGTGGATGGTATCATCTGGCAGAAGCCCAAGTCAAA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCAATAGCAGAAAACTTTaGCCATATATGTATCCAGTC +
Preference number: 4 (lower is better)
Translates to: MSREWHVLNLAEEIKGRINSRKL*PYMYPV
Trigger: GACTGGATACATATATGGGCAAAGTTTTCTGCTATT...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCAATGCTCCTTCAGTATaGATATTTAGTTCTGTAGTG +
Preference number: 4 (lower is better)
Translates to: MSREWHVLNLAEEIKGRINAPSV*IFSSVV
Trigger: CACTACAGAACTAAATATGCATACTGAAGGAGCATT...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCCTCTCTCATAGGCTTTaGTGCTCTCTTTATAAAGCC +
Preference number: 4 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFLSHRL*CSLYKA
Trigger: GGCTTTATAAAGAGAGCAGCAAAGCCTATGAGAGAG...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAATCGTTGAGCATACTGTaGAACAACTCGAGACAACAG +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKSLSIL*NNSRQQ
Trigger: CTGTTGTCTCGAGTTGTTGCACAGTATGCTCAACGA...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCTACAACACCTCCCTTTaGATTTCGTTGAGCATACTG +
Preference number: 4 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFYNTSL*ISLSIL
Trigger: CAGTATGCTCAACGAAATGCAAAGGGAGGTGTTGTA...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATACCCATTTTCCATCTaGAGCAGATGCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRYPFSI*SRCSSS
Trigger: AGAAGAGGAGCATCTGCTCCAGATGGAAAATGGGTA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358746.7
CDS-3UTR CCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATGGAGGATGTTGTACTaGTACAGCTCTGTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRWRMLY*YSSVSL
Trigger: CAGAGAAACAGAGCTGTACCAGTACAACATCCTCCA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CCA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTCAACATTGTGAAAGCTaGGGCATAATTCTGAATTCT +
Preference number: 4 (lower is better)
Translates to: DKKGSASHIHSYSKIGFIQHCES*GIILNS
Trigger: AGAATTCAGAATTATGCCCCAGCTTTCACAATGTTG...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAAGAGCTGTCAAGATATaGGCTTTGTCTTGCTCCGAT +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKRAVKI*ALSCSD
Trigger: ATCGGAGCAAGACAAAGCCCATATCTTGACAGCTCT...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAGAGCTGTCAAGATATaGGCTTTGTCTTGCTCCGAT +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRRAVKI*ALSCSD
Trigger: ATCGGAGCAAGACAAAGCCCATATCTTGACAGCTCT...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CCA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTAAGCATTTAGGTAGATaGAGCCAACCCGTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: FSQIWETPDENSVQLLTSKHLGR*SQPVLE
Trigger: TTCCAGAACGGGTTGGCTCCATCTACCTAAATGCTT...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
3UTR CAA 72 bp TTTGAAGTGCATCTGTGGCTAAGTCTGTGGACCAGGTaGTTAAAATCACTGAATCAGTTTGACAGTTATGAA +
Preference number: 4 (lower is better)
Translates to: FEVHLWLSLWTR*LKSLNQFDSYE
Trigger: TTCATAACTGTCAAACTGATTCAGTGATTTTAACAACCTGGTCCACAGACTTAGCCACAGATGCACTTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAACTTTCAGCCAGGAACTaGGTCAATTTTCTCCATAGT +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKLSARN*VNFLHS
Trigger: ACTATGGAGAAAATTGACTCAGTTCCTGGCTGAAAG...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAATCCTTTTTGGTGAAATaGATCAAAGCCTCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKSFLVK*IKASRA
Trigger: TGCCCTTGAGGCTTTGATTCATTTCACCAAAAAGGA...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp TTATATTTGCCTAGGATTTGCTGTATTGCTGCAACCTTAAACACACTGTATATGTCCTTTTTGGTGAAATaGATCAAAGCCTCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: LYLPRICCIAATLNTLYMSFLVK*IKASRA
Trigger: TGCCCTTGAGGCTTTGATTCATTTCACCAAAAAGGA...CATATACAGTGTGTTTAAGGTTGCAGCAATACAGCAAATCCTAGGCAAATATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513232.1
CDS-3UTR TCA 90 bp AATAGCAGAAAACTTTGCCCATATATGTATCCAGTCTTGCAGCCTTCAGAAAGTTTCTCAAGAGCTCTCTaGAAACATTTTTCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: NSRKLCPYMYPVLQPSESFSRAL*KHFSAC
Trigger: ACAAGCAGAAAAATGTTTTCAGAGAGCTCTTGAGAA...ACTTTCTGAAGGCTGCAAGACTGGATACATATATGGGCAAAGTTTTCTGCTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513232.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGACCAGCACTTGCCTTTTaGGTTACTGTTGTTAGGATA +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRPALAF*VTVVRI
Trigger: TATCCTAACAACAGTAACTCAAAAGGCAAGTGCTGG...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAGTAACCCAACATTGTaGAAGCTGGGGCATAATTCT +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRSNPTL*KLGHNS
Trigger: AGAATTATGCCCCAGCTTTCACAATGTTGGGTTACT...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAATTAAGTGCTGCTTTTaGCAGTGTAGCATCCTGCAT +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRIKCCF*QCSILH
Trigger: ATGCAGGATGCTACACTGTCAAAAGCAGCACTTAAT...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAATCACCAGGGTTGCTGTaGACAGCTTTAGATATTTGT +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKSPGLL*TALDIC
Trigger: ACAAATATCTAAAGCTGTTCACAGCAACCCTGGTGA...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATTTTTCATCTTCTGCTaGACTGCTTCCCATAGCCAA +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRFFIFC*TASHSQ
Trigger: TTGGCTATGGGAAGCAGTTCAGCAGAAGATGAAAAA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAGCTCTTGTATCTCCATaGGTTTTGGCATTGTTTACC +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRALVSP*VLALFT
Trigger: GGTAAACAATGCCAAAACTCATGGAGATACAAGAGC...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAGCTCTTGTATCTCCATaGGTTTTGGCATTGTTTACC +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKALVSP*VLALFT
Trigger: GGTAAACAATGCCAAAACTCATGGAGATACAAGAGC...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATGTGAGGACAATCTCTaGTTCAGTTCCAATGCTCTT +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRCEDNL*FSSNAL
Trigger: AAGAGCATTGGAACTGAATCAGAGATTGTCCTCACA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTCAAAAGGTTACCCTTTaGTTATGGTCCCGAAGCAAA +
Preference number: 4 (lower is better)
Translates to: FSQIWETPDENSVQLLTSQKVTL*LWSRSK
Trigger: TTTGCTTCGGGACCATAATCAAAGGGTAACCTTTTG...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAGATCCACAAGTTTCTTaGAGACATCACACCACTTCT +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKDPQVS*RHHTTS
Trigger: AGAAGTGGTGTGATGTCTGCAAGAAACTTGTGGATC...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAGTTTTTATCAACTTGTaGCATGTTCGAGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRVFINL*HVRATS
Trigger: AGAGGTGGCTCGAACATGGCACAAGTTGATAAAAAC...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATCTGCACCTTGTTCCTaGCGTGTTTTTATCAACTTG +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRSAPCS*RVFINL
Trigger: CAAGTTGATAAAAACACGGCAGGAACAAGGTGCAGA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCCTACAACAATACTGCTaGCCCTCATCAGTAAGATTT +
Preference number: 4 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFLQQYC*PSSVRF
Trigger: AAATCTTACTGATGAGGGGCAGCAGTATTGTTGTAG...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCTCTTCAGAGCTTGACTaGATGAAAGAACAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFSSELD*MKEQLL
Trigger: AAGAAGCTGTTCTTTCATGCAGTCAAGCTCTGAAGA...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAATATGTATCCAGTCTTaGAGCCTTCAGAAAGTGGGT +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRICIQS*SLQKVG
Trigger: ACCCACTTTCTGAAGGCTGCAAGACTGGATACATAT...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTATATGTATCCAGTCTTaGAGCCTTCAGAAAGTGGGT +
Preference number: 4 (lower is better)
Translates to: FSQIWETPDENSVQLLTSICIQS*SLQKVG
Trigger: ACCCACTTTCTGAAGGCTGCAAGACTGGATACATAT...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp TCATCTGGTATTGAGCTACAGCCTCCTTATATTTGCCTAGGATTTGCTGTATTGAATAGCAGAAAACTTTaGCCATATATGTATCCAGTC +
Preference number: 4 (lower is better)
Translates to: SSGIELQPPYICLGFAVLNSRKL*PYMYPV
Trigger: GACTGGATACATATATGGGCAAAGTTTTCTGCTATT...CAATACAGCAAATCCTAGGCAAATATAAGGAGGCTGTAGCTCAATACCAGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513232.1
CDS-3UTR GCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAATTGTGTAGCCTCCTCTaGTTAAGTATGCTTCTCCTA +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKLCSLL*LSMLLL
Trigger: TAGGAGAAGCATACTTAAGCAGAGGAGGCTACACAA...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp TTATATTTGCCTAGGATTTGCTGTATTGCTGCAACCTTAAACACACTGTATATGTTGTGTAGCCTCCTCTaGTTAAGTATGCTTCTCCTA +
Preference number: 4 (lower is better)
Translates to: LYLPRICCIAATLNTLYMLCSLL*LSMLLL
Trigger: TAGGAGAAGCATACTTAAGCAGAGGAGGCTACACAA...CATATACAGTGTGTTTAAGGTTGCAGCAATACAGCAAATCCTAGGCAAATATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505578.5
ENST00000513232.1
CDS-3UTR GCA 90 bp AATAGCAGAAAACTTTGCCCATATATGTATCCAGTCTTGCAGCCTTCAGAAAGTGATTTGCTGTATTGCTaGAACCTTAAACACACTGTA +
Preference number: 4 (lower is better)
Translates to: NSRKLCPYMYPVLQPSESDLLYC*NLKHTV
Trigger: TACAGTGTGTTTAAGGTTGCAGCAATACAGCAAATC...ACTTTCTGAAGGCTGCAAGACTGGATACATATATGGGCAAAGTTTTCTGCTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513232.1
CDS-3UTR GCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAGACACATCAGCTCGATaGTGTAGAGCACAAGTAAAA +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKDTSAR*CRAQVK
Trigger: TTTTACTTGTGCTCTACAGCATCGAGCTGATGTGTC...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAATTCACTTTAGATGGTaGGACAGCATACAGACAGGT +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRIHFRW*DSIQTG
Trigger: ACCTGTCTGTATGCTGTCGCACCATCTAAAGTGAAT...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCCTGTTGCTTTTATCTTaGAATGTTGTGCAGACCCAA +
Preference number: 4 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFLLLLS*NVVQTQ
Trigger: TTGGGTCTGCACAACATTGCAAGATAAAAGCAACAG...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCCCTTTGGTATGCATTTaGTGCTTCCTTTTTCAGTTG +
Preference number: 4 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFPLVCI*CFLFQL
Trigger: CAACTGAAAAAGGAAGCAGCAAATGCATACCAAAGG...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATCTCATAGGCTTTGCTaGTCTCTTTATAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRSHRLC*SLYKAP
Trigger: AGGGGCTTTATAAAGAGAGCAGCAAAGCCTATGAGA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAATCTCATAGGCTTTGCTaGTCTCTTTATAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKSHRLC*SLYKAP
Trigger: AGGGGCTTTATAAAGAGAGCAGCAAAGCCTATGAGA...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAACTCTCTCATAGGCTTTaGTGCTCTCTTTATAAAGCC +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKLSHRL*CSLYKA
Trigger: GGCTTTATAAAGAGAGCAGCAAAGCCTATGAGAGAG...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCATATGGGCTTTGTCTTaGTCCGATTCAACAATAGAC +
Preference number: 4 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFIWALS*SDSTID
Trigger: GTCTATTGTTGAATCGGAGCAAGACAAAGCCCATAT...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAATTAGATATTTGTTTTTaGACAGCCACACTGCGGCCT +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKLDICF*TATLRP
Trigger: AGGCCGCAGTGTGGCTGTGCAAAAACAAATATCTAA...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAATACAACACCTCCCTTTaGATTTCGTTGAGCATACTG +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKYNTSL*ISLSIL
Trigger: CAGTATGCTCAACGAAATGCAAAGGGAGGTGTTGTA...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAATCTGTAACACATCTCTaGAGCTCTCATCATTCCTTG +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKSVTHL*SSHHSL
Trigger: CAAGGAATGATGAGAGCTGCAGAGATGTGTTACAGA...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCCTAAAATATCTGTCTTaGTCCAAATCACTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFLKYLS*SKSLQH
Trigger: GTGCTGCAGTGATTTGGAGCAAGACAGATATTTTAG...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CCA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTTCTTCACTTCCTTGCTaGACATTCTTATCTGAAATT +
Preference number: 4 (lower is better)
Translates to: DKKGSASHIHSYSKIGFISSLPC*TFLSEI
Trigger: AATTTCAGATAAGAATGTCCAGCAAGGAAGTGAAGA...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATGCCAAGCTAGTAATTaGTCTGGCTCTAATTCAGCA +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRCQASN*SGSNSA
Trigger: TGCTGAATTAGAGCCAGACCAATTACTAGCTTGGCA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CCA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTTGCCAAGCTAGTAATTaGTCTGGCTCTAATTCAGCA +
Preference number: 4 (lower is better)
Translates to: FSQIWETPDENSVQLLTSCQASN*SGSNSA
Trigger: TGCTGAATTAGAGCCAGACCAATTACTAGCTTGGCA...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAACTGTATATGGATTCTaGGTTCAGCTCACTGGCTTT +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRTVYGF*VQLTGF
Trigger: AAAGCCAGTGAGCTGAACCCAGAATCCATATACAGT...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAGGAATAGCATTCATCTaGAGGATGTTGTACTGGTAC +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKGIAFI*RMLYWY
Trigger: GTACCAGTACAACATCCTCCAGATGAATGCTATTCC...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CCA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCAACAAAATTGCCCTTTaGTATGCATTTGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFNKIAL*YAFAAS
Trigger: GGAAGCAGCAAATGCATACCAAAGGGCAATTTTGTT...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp TCCTTATATTTGCCTAGGATTTGCTGTATTGCTGCAACCTTAAACACACTGTATAATCTAGCAGACTCATaGGGAAATTTGGATAAACTC +
Preference number: 4 (lower is better)
Translates to: SLYLPRICCIAATLNTLYNLADS*GNLDKL
Trigger: GAGTTTATCCAAATTTCCTCATGAGTCTGCTAGATT...ATACAGTGTGTTTAAGGTTGCAGCAATACAGCAAATCCTAGGCAAATATAAGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505578.5
CDS-3UTR TCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAATTGTCTCTTCACCCATaGACCAGTATGTTAATCCAA +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKLSLHP*TSMLIQ
Trigger: TTGGATTAACATACTGGTTCATGGGTGAAGAGACAA...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTTTGTCTCTTCACCCATaGACCAGTATGTTAATCCAA +
Preference number: 4 (lower is better)
Translates to: FSQIWETPDENSVQLLTSLSLHP*TSMLIQ
Trigger: TTGGATTAACATACTGGTTCATGGGTGAAGAGACAA...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAATGATCATCTGGTATTaGGCTACAGCCTCCTTATAT +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRMIIWY*ATASLY
Trigger: ATATAAGGAGGCTGTAGCTCAATACCAGATGATCAT...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTATGATCATCTGGTATTaGGCTACAGCCTCCTTATAT +
Preference number: 4 (lower is better)
Translates to: FSQIWETPDENSVQLLTSMIIWY*ATASLY
Trigger: ATATAAGGAGGCTGTAGCTCAATACCAGATGATCAT...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATGTTTTCCTTCTTTCTaGCCTAGAAGGACTCCTAAA +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRCFPSF*PRRTPK
Trigger: TTTAGGAGTCCTTCTAGGTCAGAAAGAAGGAAAACA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAGCATTCCAGTATAAGTaGTTATTACTGTCGAGTCTC +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRAFQYK*LLLSSL
Trigger: GAGACTCGACAGTAATAATCACTTATACTGGAATGC...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTGCATTCCAGTATAAGTaGTTATTACTGTCGAGTCTC +
Preference number: 4 (lower is better)
Translates to: FSQIWETPDENSVQLLTSAFQYK*LLLSSL
Trigger: GAGACTCGACAGTAATAATCACTTATACTGGAATGC...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCCCAATGCAAAACCTATaGTGTCTTCTAACACTTCAA +
Preference number: 4 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFPMQNL*CLLTLQ
Trigger: TTGAAGTGTTAGAAGACATCATAGGTTTTGCATTGG...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCTATAAAGCCCCTTCATaGATAAAGCCAATGCAAAAC +
Preference number: 4 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFYKAPS*IKPMQN
Trigger: GTTTTGCATTGGCTTTATTCATGAAGGGGCTTTATA...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAGATAACGGCTGGCTaGTCAGGGTTACTTTTTAAA +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRKITAG*SGLLFK
Trigger: TTTAAAAAGTAACCCTGATCAGCCAGCCGTTATCTT...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTAAGATAACGGCTGGCTaGTCAGGGTTACTTTTTAAA +
Preference number: 4 (lower is better)
Translates to: FSQIWETPDENSVQLLTSKITAG*SGLLFK
Trigger: TTTAAAAAGTAACCCTGATCAGCCAGCCGTTATCTT...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAGGAGTGGTTTACACTaGACTTGTCTCAAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRRSGLH*TCLKSK
Trigger: CTTACTTTTGAGACAAGTTCAGTGTAAACCACTCCT...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTAGGAGTGGTTTACACTaGACTTGTCTCAAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: FSQIWETPDENSVQLLTSRSGLH*TCLKSK
Trigger: CTTACTTTTGAGACAAGTTCAGTGTAAACCACTCCT...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGACCCCCATTTTGCGTTTaGATTGTAACAAAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRPPFCV*IVTKLV
Trigger: TACAAGCTTTGTTACAATTCAAACGCAAAATGGGGG...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGACAGTCTTCACTTCCTTaGTGGACATTCTTATCTGAA +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRQSSLP*WTFLSE
Trigger: TTCAGATAAGAATGTCCAGCAAGGAAGTGAAGACTG...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGACTACAACAATACTGCTaGCCCTCATCAGTAAGATTT +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRLQQYC*PSSVRF
Trigger: AAATCTTACTGATGAGGGGCAGCAGTATTGTTGTAG...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAATCTACAACAATACTaGTGCCCCTCATCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRNLQQY*CPSSVR
Trigger: TCTTACTGATGAGGGGCAGCAGTATTGTTGTAGATT...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTAATCTACAACAATACTaGTGCCCCTCATCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: FSQIWETPDENSVQLLTSNLQQY*CPSSVR
Trigger: TCTTACTGATGAGGGGCAGCAGTATTGTTGTAGATT...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAGCTTCTTTAGGTCTATaGATTTTGACTTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKASLGL*ILTWAS
Trigger: AGAAGCCCAAGTCAAAATGCATAGACCTAAAGAAGC...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTGCTTCTTTAGGTCTATaGATTTTGACTTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: FSQIWETPDENSVQLLTSASLGL*ILTWAS
Trigger: AGAAGCCCAAGTCAAAATGCATAGACCTAAAGAAGC...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAATCTTCAGAGCTTGACTaGATGAAAGAACAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKSSELD*MKEQLL
Trigger: AAGAAGCTGTTCTTTCATGCAGTCAAGCTCTGAAGA...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAATACCACTGTAACATaGAACCACACCAAGAGCATT +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRNTTVT*NHTKSI
Trigger: AATGCTCTTGGTGTGGTTGCATGTTACAGTGGTATT...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATCCCAAGTTGGTCCATaGAACAGCATTAATTTGTTC +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRSQVGP*NSINLF
Trigger: GAACAAATTAATGCTGTTGCATGGACCAACTTGGGA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTTCCCAAGTTGGTCCATaGAACAGCATTAATTTGTTC +
Preference number: 4 (lower is better)
Translates to: FSQIWETPDENSVQLLTSSQVGP*NSINLF
Trigger: GAACAAATTAATGCTGTTGCATGGACCAACTTGGGA...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAATATCTTGCAATGTTGTaGAGACCCAATACGCATAAC +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKYLAML*RPNTHN
Trigger: GTTATGCGTATTGGGTCTGCACAACATTGCAAGATA...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATATCTTGCAATGTTGTaGAGACCCAATACGCATAAC +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRYLAML*RPNTHN
Trigger: GTTATGCGTATTGGGTCTGCACAACATTGCAAGATA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGACTGTTGCTTTTATCTTaGAATGTTGTGCAGACCCAA +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRLLLLS*NVVQTQ
Trigger: TTGGGTCTGCACAACATTGCAAGATAAAAGCAACAG...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGACCTTTGGTATGCATTTaGTGCTTCCTTTTTCAGTTG +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRPLVCI*CFLFQL
Trigger: CAACTGAAAAAGGAAGCAGCAAATGCATACCAAAGG...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCAATTGCCCTTTGGTATaGATTTGCTGCTTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFNCPLV*ICCFLF
Trigger: AAAAAGGAAGCAGCAAATGCATACCAAAGGGCAATT...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAATATGGGCTTTGTCTTaGTCCGATTCAACAATAGAC +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKIWALS*SDSTID
Trigger: GTCTATTGTTGAATCGGAGCAAGACAAAGCCCATAT...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAACTGATTCAGTTCCAATaGTCTTGTATCTCCATGAGT +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKLIQFQ*SCISMS
Trigger: ACTCATGGAGATACAAGAGCATTGGAACTGAATCAG...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTCTGATTCAGTTCCAATaGTCTTGTATCTCCATGAGT +
Preference number: 4 (lower is better)
Translates to: FSQIWETPDENSVQLLTSLIQFQ*SCISMS
Trigger: ACTCATGGAGATACAAGAGCATTGGAACTGAATCAG...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAGAGAACCAAAAGTCCTaGGATATTATCTGCATCAGA +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRENQKS*DIICIR
Trigger: TCTGATGCAGATAATATCCCAGGACTTTTGGTTCTC...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAAACATTCACTTTAGATaGTGCGACAGCATACAGACA +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKNIHFR*CDSIQT
Trigger: TGTCTGTATGCTGTCGCACCATCTAAAGTGAATGTT...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAATAACTTGTGCTGCTaGAATAGCATTCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRNNLCC*NSIHLE
Trigger: CTCCAGATGAATGCTATTCCAGCAGCACAAGTTATT...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CCA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTAATAACTTGTGCTGCTaGAATAGCATTCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: FSQIWETPDENSVQLLTSNNLCC*NSIHLE
Trigger: CTCCAGATGAATGCTATTCCAGCAGCACAAGTTATT...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAAACAAAATTGCCCTTTaGTATGCATTTGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKNKIAL*YAFAAS
Trigger: GGAAGCAGCAAATGCATACCAAAGGGCAATTTTGTT...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAGAGCTGCCTTCTGAATaGTCTTTAGTGCAGTATTTT +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKELPSE*SLVQYF
Trigger: AAAATACTGCACTAAAGACCATTCAGAAGGCAGCTC...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGACTCTTGAACCAAAGATaGCCAGTGATCATTGGAAAT +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRLLNQR*PVIIGN
Trigger: ATTTCCAATGATCACTGGCCATCTTTGGTTCAAGAG...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAATCTAGCAGACTCATaGGGAAATTTGGATAAACTC +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRNLADS*GNLDKL
Trigger: GAGTTTATCCAAATTTCCTCATGAGTCTGCTAGATT...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATTCTCAAGAGCTCTCTaGAAACATTTTTCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRFSRAL*KHFSAC
Trigger: ACAAGCAGAAAAATGTTTTCAGAGAGCTCTTGAGAA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAAGGACTCCTAAAACATaGACATTCACTTTAGATGGT +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKRTPKT*TFTLDG
Trigger: ACCATCTAAAGTGAATGTTCATGTTTTAGGAGTCCT...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTAGGACTCCTAAAACATaGACATTCACTTTAGATGGT +
Preference number: 4 (lower is better)
Translates to: FSQIWETPDENSVQLLTSRTPKT*TFTLDG
Trigger: ACCATCTAAAGTGAATGTTCATGTTTTAGGAGTCCT...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR TCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAATTTTGAAAGCCTCATaGGCTTGCTCAATGTTTTCA +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKILKAS*ACSMFS
Trigger: TGAAAACATTGAGCAAGCTCATGAGGCTTTCAAAAT...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAATTTTGAAAGCCTCATaGGCTTGCTCAATGTTTTCA +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRILKAS*ACSMFS
Trigger: TGAAAACATTGAGCAAGCTCATGAGGCTTTCAAAAT...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGACCAATGCAAAACCTATaGTGTCTTCTAACACTTCAA +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRPMQNL*CLLTLQ
Trigger: TTGAAGTGTTAGAAGACATCATAGGTTTTGCATTGG...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAATATAAAGCCCCTTCATaGATAAAGCCAATGCAAAAC +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKYKAPS*IKPMQN
Trigger: GTTTTGCATTGGCTTTATTCATGAAGGGGCTTTATA...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATACTGTCTTTGTGTTTaGTGTGCTTCAGTAACTCAT +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRYCLCV*CASVTH
Trigger: ATGAGTTACTGAAGCACATCAAACACAAAGACAGTA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR TCA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTCTGATTGCATGGGTATaGATGATTATAATGTTCAGC +
Preference number: 4 (lower is better)
Translates to: FSQIWETPDENSVQLLTSLIAWV*MIIMFS
Trigger: GCTGAACATTATAATCATTCATACCCATGCAATCAG...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCTTGGTAATGATATTCTaGAACTTCGGTATCTTTCTC +
Preference number: 4 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFLVMIF*NFGIFL
Trigger: GAGAAAGATACCGAAGTTGCAGAATATCATTACCAA...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR GCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAGATTTGCTGTATTGCTaGAACCTTAAACACACTGTA +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKDLLYC*NLKHTV
Trigger: TACAGTGTGTTTAAGGTTGCAGCAATACAGCAAATC...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATATTTGCCTAGGATTTaGTGTATTGCTGCAACCTTA +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRYLPRI*CIAATL
Trigger: TAAGGTTGCAGCAATACAGCAAATCCTAGGCAAATA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAACAAAATAACTTGTGCTaGTGGAATAGCATTCATCTG +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKQNNLC*WNSIHL
Trigger: CAGATGAATGCTATTCCAGCAGCACAAGTTATTTTG...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGACAAAATAACTTGTGCTaGTGGAATAGCATTCATCTG +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRQNNLC*WNSIHL
Trigger: CAGATGAATGCTATTCCAGCAGCACAAGTTATTTTG...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAATTGCCCTTTGGTATaGATTTGCTGCTTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRNCPLV*ICCFLF
Trigger: AAAAAGGAAGCAGCAAATGCATACCAAAGGGCAATT...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCTTCTATTGTGCACCATaGAAGATGCAGAAAATAATG +
Preference number: 4 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFFYCAP*KMQKIM
Trigger: CATTATTTTCTGCATCTTGCATGGTGCACAATAGAA...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAATTTGCCATCATAAGATaGCATTCACCCAAACCTTTT +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKFAIIR*HSPKPF
Trigger: AAAAGGTTTGGGTGAATGCCATCTTATGATGGCAAA...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CCA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTTTTGCCATCATAAGATaGCATTCACCCAAACCTTTT +
Preference number: 4 (lower is better)
Translates to: FSQIWETPDENSVQLLTSFAIIR*HSPKPF
Trigger: AAAAGGTTTGGGTGAATGCCATCTTATGATGGCAAA...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGACAACATTGTGAAAGCTaGGGCATAATTCTGAATTCT +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRQHCES*GIILNS
Trigger: AGAATTCAGAATTATGCCCCAGCTTTCACAATGTTG...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATATCATATTCACCAGTaGAACATAACAATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRYHIHQ*NITICR
Trigger: ACGGCAGATTGTTATGTTCCACTGGTGAATATGATA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAGCTCATAGTCATCTTTaGCATATAAGTGTCTCAGTA +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRAHSHL*HISVSV
Trigger: TACTGAGACACTTATATGCCAAAGATGACTATGAGC...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAGCTCATAGTCATCTTTaGCATATAAGTGTCTCAGTA +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKAHSHL*HISVSV
Trigger: TACTGAGACACTTATATGCCAAAGATGACTATGAGC...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATTGGTAATGATATTCTaGAACTTCGGTATCTTTCTC +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRLVMIF*NFGIFL
Trigger: GAGAAAGATACCGAAGTTGCAGAATATCATTACCAA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAAATAGCAGAAAACTTTaGCCATATATGTATCCAGTC +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKNSRKL*PYMYPV
Trigger: GACTGGATACATATATGGGCAAAGTTTTCTGCTATT...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
34% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAAATGCTCCTTCAGTATaGATATTTAGTTCTGTAGTG +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKNAPSV*IFSSVV
Trigger: CACTACAGAACTAAATATGCATACTGAAGGAGCATT...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
34% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR GCA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATTCTATTGTGCACCATaGAAGATGCAGAAAATAATG +
Preference number: 4 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRFYCAP*KMQKIM
Trigger: CATTATTTTCTGCATCTTGCATGGTGCACAATAGAA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CCA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAATCTTCACTTCCTTGCTaGACATTCTTATCTGAAATT +
Preference number: 4 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKSSLPC*TFLSEI
Trigger: AATTTCAGATAAGAATGTCCAGCAAGGAAGTGAAGA...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS TCA 90 bp AGGTACCAACGTGCAGTTGATGCAATAGATTTGGGATACCCAGGCTaGTATACCACTCTTTCCAAAAGACGCCGTGTCTCTCTTGCCCCC +
Preference number: 5 (lower is better)
Translates to: RYQRAVDAIDLGYPG*YTTLSKRRRVSLAP
Trigger: GGGGGCAAGAGAGACACGGCGTCTTTTGGAAAGAGTGGTATATCAGCCTGGGTATCCCAAATCTATTGCATCAACTGCACGTTGGTACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS TCA 90 bp CGAGAAGAATCAAACGGGATAAAATGCAGAAAACAGAGCCTTGCCTaGTGGGCTGGCTTTCCCTTCCTCAGCACCATTGCCAAAGGTCAG +
Preference number: 5 (lower is better)
Translates to: REESNGIKCRKQSLA*WAGFPFLSTIAKGQ
Trigger: CTGACCTTTGGCAATGGTGCTGAGGAAGGGAAAGCCAGCCCATCAGGCAAGGCTCTGTTTTCTGCATTTTATCCCGTTTGATTCTTCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512026.5
CDS GCA 90 bp CTAACGAGAAGAATCAAACGGGATAAAATGCAGAAAACAGAGCCTTaGCTGATGGGCTGGCTTTCCCTTCCTCAGCACCATTGCCAAAGG +
Preference number: 5 (lower is better)
Translates to: LTRRIKRDKMQKTEP*LMGWLSLPQHHCQR
Trigger: CCTTTGGCAATGGTGCTGAGGAAGGGAAAGCCAGCCCATCAGGCAAGGCTCTGTTTTCTGCATTTTATCCCGTTTGATTCTTCTCGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512026.5
CDS GCA 90 bp CAAGTAGTGCTAGTCTCAACAGACTTGAGAGCTTCCCACTCCAACTaGCCCGTTGGGATGCCAATTGTAGACTCTTTCTGTAACACATCT +
Preference number: 5 (lower is better)
Translates to: QVVLVSTDLRASHSN*PVGMPIVDSFCNTS
Trigger: AGATGTGTTACAGAAAGAGTCTACAATTGGCATCCCAACGGGGCAGTTGGAGTGGGAAGCTCTCAAGTCTGTTGAGACTAGCACTACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS GCA 90 bp AGATTCTTCCAGCACAACGTCTCTAAGGCTCTAAAATATCTGTCTTaGTCCAAATCACTGCAGCACCTGCTCCTATTGACACTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: RFFQHNVSKALKYLS*SKSLQHLLLLTLEQ
Trigger: CTGCTCCAGTGTCAATAGGAGCAGGTGCTGCAGTGATTTGGAGCAAGACAGATATTTTAGAGCCTTAGAGACGTTGTGCTGGAAGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CAA 90 bp TATATGGATTCTGGGTTCAGCTCACTGGCTTTTGTGAAGGACTTCAAGGCTGTTAGGACTTCAAGGCTGTaGTGTAGCCTCCTCTGCTTA +
Preference number: 5 (lower is better)
Translates to: YMDSGFSSLAFVKDFKAVRTSRL*CSLLCL
Trigger: TAAGCAGAGGAGGCTACACAACAGCCTTGAAGTCCT...AACAGCCTTGAAGTCCTTCACAAAAGCCAGTGAGCTGAACCCAGAATCCATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505578.5
ENST00000513232.1
CDS TCA 90 bp ACAGCTTCTTTAGGTCTATGCATTTTGACTTGGGCTTCTGCCAGATaGTACCATCCACTTGTGCAGACAGGGCTTTCCTTTAACCCTTCT +
Preference number: 5 (lower is better)
Translates to: TASLGLCILTWASAR*YHPLVQTGLSFNPS
Trigger: AGAAGGGTTAAAGGAAAGCCCTGTCTGCACAAGTGGATGGTATCATCTGGCAGAAGCCCAAGTCAAAATGCATAGACCTAAAGAAGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358746.7
ENST00000503279.1
ENST00000514952.5
ENST00000649566.1
CDS TCA 90 bp GACAGTGTAGCATCCTGCATTGCCAACCCTAGAGCACACAGGGCTTaGAGGCTTTCTGTGGTTGGTTCCTTTAAGATAGAGCATTTAAAT +
Preference number: 5 (lower is better)
Translates to: DSVASCIANPRAHRA*RLSVVGSFKIEHLN
Trigger: ATTTAAATGCTCTATCTTAAAGGAACCAACCACAGAAAGCCTTCAAGCCCTGTGTGCTCTAGGGTTGGCAATGCAGGATGCTACACTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp GATTCCCAACAATTGAAGTCCTTTGGGTCTGCTCTTAATGCTGCCTGTAAATCAAGGACTTCAAGGCTGTaGTGTAGCCTCCTCTGCTTA +
Preference number: 5 (lower is better)
Translates to: DSQQLKSFGSALNAACKSRTSRL*CSLLCL
Trigger: TAAGCAGAGGAGGCTACACAACAGCCTTGAAGTCCT...TGATTTACAGGCAGCATTAAGAGCAGACCCAAAGGACTTCAATTGTTGGGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505578.5
CDS-3UTR CAA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCAAGCAGGAGAATCACTaGAACCCAGAAGGCGGAGAT +
Preference number: 5 (lower is better)
Translates to: MSREWHVLNLAEEIKGRIKQENH*NPEGGD
Trigger: ATCTCCGCCTTCTGGGTTCAAGTGATTCTCCTGCTT...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CAA 90 bp CTGCTCTTAATGCTGCCTGTAAATCAGCCACTGCTTGAGAATGCTGACCAGCTTAATGATCATCTGGTATaGAGCTACAGCCTCCTTATA +
Preference number: 5 (lower is better)
Translates to: LLLMLPVNQPLLENADQLNDHLV*SYSLLI
Trigger: TATAAGGAGGCTGTAGCTCAATACCAGATGATCATT...AAGCTGGTCAGCATTCTCAAGCAGTGGCTGATTTACAGGCAGCATTAAGAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505578.5
CDS TCA 90 bp TTGTTTTTGCACAGCCACACTGCGGCCTTGGAGTGCATAAATCGCTaGTGTAAGAAGGCACCTCTGATAATTACTGTCTTTGTGTTTGAT +
Preference number: 5 (lower is better)
Translates to: LFLHSHTAALECINR*CKKAPLIITVFVFD
Trigger: ATCAAACACAAAGACAGTAATTATCAGAGGTGCCTTCTTACATCAGCGATTTATGCACTCCAAGGCCGCAGTGTGGCTGTGCAAAAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS TCA 90 bp ACAGCTTCTTTAGGTCTATGCATTTTGACTTGGGCTTCTGCCAGATaGTACCATCCACTTGTGCAGACAGGGCTTTCCTTTAACCATTTT +
Preference number: 5 (lower is better)
Translates to: TASLGLCILTWASAR*YHPLVQTGLSFNHF
Trigger: AAAATGGTTAAAGGAAAGCCCTGTCTGCACAAGTGGATGGTATCATCTGGCAGAAGCCCAAGTCAAAATGCATAGACCTAAAGAAGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504421.1
CDS-3UTR CAA 90 bp AAACACACTGTATATGGATTCTGGGTTCAGCTCACTGGCTTTTGTGAAGGACTTAACGATTCCCAACAATaGAAGTCCTTTGGGTCTGCT +
Preference number: 5 (lower is better)
Translates to: KHTVYGFWVQLTGFCEGLNDSQQ*KSFGSA
Trigger: AGCAGACCCAAAGGACTTCAATTGTTGGGAATCGTT...AAGTCCTTCACAAAAGCCAGTGAGCTGAACCCAGAATCCATATACAGTGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505578.5
ENST00000513232.1
CDS-3UTR CAA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCTTTAGATATTTGTTTTaGCACAGCCACACTGCGGCC +
Preference number: 5 (lower is better)
Translates to: MSREWHVLNLAEEIKGRIFRYLF*HSHTAA
Trigger: GGCCGCAGTGTGGCTGTGCAAAAACAAATATCTAAA...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CAA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGACAGCACCTGCTCCTATaGACACTGGAGCAGATGCTC +
Preference number: 5 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRQHLLL*TLEQML
Trigger: GAGCATCTGCTCCAGTGTCAATAGGAGCAGGTGCTG...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS TCA 90 bp AGAGAGTTTCAGCTTCAGATATTCTTCCTGTGTCTATTAGACCAGTaGCAGCTTGTGAGAGAGACCACTTTTCAAGGGACTGGTTGTAAT +
Preference number: 5 (lower is better)
Translates to: REFQLQIFFLCLLDQ*QLVRETTFQGTGCN
Trigger: ATTACAACCAGTCCCTTGAAAAGTGGTCTCTCTCACAAGCTGTCACTGGTCTAATAGACACAGGAAGAATATCTGAAGCTGAAACTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358746.7
ENST00000502768.1
ENST00000649566.1
CDS-3UTR CAA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTTTAGGTCTATGCATTTaGACTTGGGCTTCTGCCAGA +
Preference number: 5 (lower is better)
Translates to: DKKGSASHIHSYSKIGFILGLCI*TWASAR
Trigger: TCTGGCAGAAGCCCAAGTCAAAATGCATAGACCTAA...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CAA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTGATCAAGCGTACGAATaGCTTCCTCTGAAGAGTCAT +
Preference number: 5 (lower is better)
Translates to: DKKGSASHIHSYSKIGFIDQAYE*LPLKSH
Trigger: ATGACTCTTCAGAGGAAGCAATTCGTACGCTTGATC...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CAA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCTCTGTTGCTTTTATCTaGCAATGTTGTGCAGACCCA +
Preference number: 5 (lower is better)
Translates to: MSREWHVLNLAEEIKGRISVAFI*QCCADP
Trigger: TGGGTCTGCACAACATTGCAAGATAAAAGCAACAGA...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CAA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCGATATGGGCTTTGTCTaGCTCCGATTCAACAATAGA +
Preference number: 5 (lower is better)
Translates to: MSREWHVLNLAEEIKGRIDMGFV*LRFNNR
Trigger: TCTATTGTTGAATCGGAGCAAGACAAAGCCCATATC...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CAA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTTCCCTTTGCATTTCGTaGAGCATACTGTGCAACAAC +
Preference number: 5 (lower is better)
Translates to: DKKGSASHIHSYSKIGFISLCIS*SILCNN
Trigger: GTTGTTGCACAGTATGCTCAACGAAATGCAAAGGGA...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CAA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCAGTCTGTGGACCAGGTaGTTAAAATCACTGAATCAG +
Preference number: 5 (lower is better)
Translates to: MSREWHVLNLAEEIKGRISLWTR*LKSLNQ
Trigger: CTGATTCAGTGATTTTAACAACCTGGTCCACAGACT...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CAA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCTCAAAAGGTTACCCTTaGATTATGGTCCCGAAGCAA +
Preference number: 5 (lower is better)
Translates to: MSREWHVLNLAEEIKGRISKGYP*IMVPKQ
Trigger: TTGCTTCGGGACCATAATCAAAGGGTAACCTTTTGA...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CAA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAGATGATACCATCCACTaGTGCAGACAGGGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKDDTIH*CRQGFP
Trigger: AGGAAAGCCCTGTCTGCACAAGTGGATGGTATCATC...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAGATGATACCATCCACTaGTGCAGACAGGGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRDDTIH*CRQGFP
Trigger: AGGAAAGCCCTGTCTGCACAAGTGGATGGTATCATC...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAGGACTTCAAGGCTGTaGTGTAGCCTCCTCTGCTTA +
Preference number: 5 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRRTSRL*CSLLCL
Trigger: TAAGCAGAGGAGGCTACACAACAGCCTTGAAGTCCT...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAAGGACTTCAAGGCTGTaGTGTAGCCTCCTCTGCTTA +
Preference number: 5 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKRTSRL*CSLLCL
Trigger: TAAGCAGAGGAGGCTACACAACAGCCTTGAAGTCCT...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp GGTATTGAGCTACAGCCTCCTTATATTTGCCTAGGATTTGCTGTATTGCTGCAAAATGATCATCTGGTATaGAGCTACAGCCTCCTTATA +
Preference number: 5 (lower is better)
Translates to: GIELQPPYICLGFAVLLQNDHLV*SYSLLI
Trigger: TATAAGGAGGCTGTAGCTCAATACCAGATGATCATT...TTGCAGCAATACAGCAAATCCTAGGCAAATATAAGGAGGCTGTAGCTCAATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505578.5
ENST00000513232.1
CDS-3UTR CAA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCTTAAGATCATTCATGTaGCTGCCTGTTTCTGCTAGA +
Preference number: 5 (lower is better)
Translates to: MSREWHVLNLAEEIKGRILRSFM*LPVSAR
Trigger: TCTAGCAGAAACAGGCAGCAACATGAATGATCTTAA...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CAA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCGAAAGCCTCATGAGCTaGCTCAATGTTTTCATTTGT +
Preference number: 5 (lower is better)
Translates to: MSREWHVLNLAEEIKGRIESLMS*LNVFIC
Trigger: ACAAATGAAAACATTGAGCAAGCTCATGAGGCTTTC...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CAA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAACTAGTCTCAACAGACTaGAGAGCTTCCCACTCCAAC +
Preference number: 5 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKLVSTD*RASHSN
Trigger: GTTGGAGTGGGAAGCTCTCAAGTCTGTTGAGACTAG...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAACTCAGTTGTAGCCTCTaGAACCAAAGATGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKLSCSL*NQRWPV
Trigger: CACTGGCCATCTTTGGTTCAAGAGGCTACAACTGAG...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTTCAGTTCCAATGCTCTaGTATCTCCATGAGTTTTGG +
Preference number: 5 (lower is better)
Translates to: DKKGSASHIHSYSKIGFISVPML*YLHEFW
Trigger: CCAAAACTCATGGAGATACAAGAGCATTGGAACTGA...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS TCA 90 bp TTGCAGCTTCATCAAATGAACCTTTGTTCCGATAGGCCAAGCTTTTaGGAACCAAAAGTCCTGGGATATTATCTGCATCAGAAATCTGAT +
Preference number: 5 (lower is better)
Translates to: LQLHQMNLCSDRPSF*EPKVLGYYLHQKSD
Trigger: ATCAGATTTCTGATGCAGATAATATCCCAGGACTTTTGGTTCTCAAAAGCTTGGCCTATCGGAACAAAGGTTCATTTGATGAAGCTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358746.7
ENST00000514952.5
ENST00000649566.1
CDS-3UTR CAA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAACGTGTTTTTATCAACTaGTGCCATGTTCGAGCCACC +
Preference number: 5 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKRVFIN*CHVRAT
Trigger: GGTGGCTCGAACATGGCACAAGTTGATAAAAACACG...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTTTCATTTTCTGCACCTaGTTCCTGCCGTGTTTTTAT +
Preference number: 5 (lower is better)
Translates to: DKKGSASHIHSYSKIGFIFIFCT*FLPCFY
Trigger: ATAAAAACACGGCAGGAACAAGGTGCAGAAAATGAA...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CAA 90 bp TATCTCCCACTACGTCTCTATAATAATGACCTAAATAGCAGAAAACTTTGCCCAAACGATTCCCAACAATaGAAGTCCTTTGGGTCTGCT +
Preference number: 5 (lower is better)
Translates to: YLPLRLYNNDLNSRKLCPNDSQQ*KSFGSA
Trigger: AGCAGACCCAAAGGACTTCAATTGTTGGGAATCGTT...TGGGCAAAGTTTTCTGCTATTTAGGTCATTATTATAGAGACGTAGTGGGAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513232.1
CDS-3UTR CAA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCAACGATTCCCAACAATaGAAGTCCTTTGGGTCTGCT +
Preference number: 5 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFNDSQQ*KSFGSA
Trigger: AGCAGACCCAAAGGACTTCAATTGTTGGGAATCGTT...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CAA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCTTCATCTGGAGGATGTaGTACTGGTACAGCTCTGTT +
Preference number: 5 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFFIWRM*YWYSSV
Trigger: AACAGAGCTGTACCAGTACAACATCCTCCAGATGAA...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CAA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCGTCAAGATATGGGCTTaGTCTTGCTCCGATTCAACA +
Preference number: 5 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFVKIWA*SCSDST
Trigger: TGTTGAATCGGAGCAAGACAAAGCCCATATCTTGAC...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CAA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCTTACTGTCTTTGTGTTaGATGTGCTTCAGTAACTCA +
Preference number: 5 (lower is better)
Translates to: MSREWHVLNLAEEIKGRILLSLC*MCFSNS
Trigger: TGAGTTACTGAAGCACATCAAACACAAAGACAGTAA...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CAA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGACATCATTCCTTGGGATaGATACACATGTGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRHHSLG*IHMCQP
Trigger: TGGCTGGCACATGTGTATCAATCCCAAGGAATGATG...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAACATCATTCCTTGGGATaGATACACATGTGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKHHSLG*IHMCQP
Trigger: TGGCTGGCACATGTGTATCAATCCCAAGGAATGATG...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCAGCTCTCATCATTCCTaGGGATTGATACACATGTGC +
Preference number: 5 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFSSHHS*GLIHMC
Trigger: GCACATGTGTATCAATCCCAAGGAATGATGAGAGCT...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CAA 90 bp ATGAGCAGAGAATGGCACGTGTTGAACCTTGCTGAAGAAATAAAGGGAAGAATCTTTGCTTTAGGCATGTaGTTTAACACCATTCACCTT +
Preference number: 5 (lower is better)
Translates to: MSREWHVLNLAEEIKGRIFALGM*FNTIHL
Trigger: AAGGTGAATGGTGTTAAACAACATGCCTAAAGCAAA...GATTCTTCCCTTTATTTCTTCAGCAAGGTTCAACACGTGCCATTCTCTGCTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS GCA 90 bp CCTCTAGGTGTTTCTTTTCTTGGTAATATAGATCCACAAGTTTCTTaGAGACATCACACCACTTCTGCTTGTCAACACTCTCATAAAGAT +
Preference number: 5 (lower is better)
Translates to: PLGVSFLGNIDPQVS*RHHTTSACQHSHKD
Trigger: ATCTTTATGAGAGTGTTGACAAGCAGAAGTGGTGTGATGTCTGCAAGAAACTTGTGGATCTATATTACCAAGAAAAGAAACACCTAGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358746.7
ENST00000514952.5
ENST00000515207.1
ENST00000649566.1
CDS-3UTR CAA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCATTTCTCATACAAGTTaGCTAACCCCTGCCAAGCTA +
Preference number: 5 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFISHTS*LTPAKL
Trigger: TAGCTTGGCAGGGGTTAGCAAACTTGTATGAGAAAT...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CAA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAAGATCCACAAGTTTCTaGCAGACATCACACCACTTC +
Preference number: 5 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKRSTSF*QTSHHF
Trigger: GAAGTGGTGTGATGTCTGCAAGAAACTTGTGGATCT...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTAGATCCACAAGTTTCTaGCAGACATCACACCACTTC +
Preference number: 5 (lower is better)
Translates to: FSQIWETPDENSVQLLTSRSTSF*QTSHHF
Trigger: GAAGTGGTGTGATGTCTGCAAGAAACTTGTGGATCT...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CAA 90 bp GACAAAAAGGGATCTGCAAGCCACATTCACTCATACTCCAAAATAGGCTTCATTATGCCTATAAAGTACTaGGTGATCTTCACTAGGAAT +
Preference number: 5 (lower is better)
Translates to: DKKGSASHIHSYSKIGFIMPIKY*VIFTRN
Trigger: ATTCCTAGTGAAGATCACCAAGTACTTTATAGGCAT...AATGAAGCCTATTTTGGAGTATGAGTGAATGTGGCTTGCAGATCCCTTTTTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CAA 90 bp TTTCCCAAAGGAGGTATCAAACTTTTTATGCAGCAACCAAGTATGTATACCTTCTCTATGCATTTTGACTaGGGCTTCTGCCAGATGATA +
Preference number: 5 (lower is better)
Translates to: FPKGGIKLFMQQPSMYTFSMHFD*GFCQMI
Trigger: TATCATCTGGCAGAAGCCCAAGTCAAAATGCATAGA...GAAGGTATACATACTTGGTTGCTGCATAAAAAGTTTGATACCTCCTTTGGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CAA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATTAGGTCTATGCATTTaGACTTGGGCTTCTGCCAGA +
Preference number: 5 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRLGLCI*TWASAR
Trigger: TCTGGCAGAAGCCCAAGTCAAAATGCATAGACCTAA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAGATCAAGCGTACGAATaGCTTCCTCTGAAGAGTCAT +
Preference number: 5 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRDQAYE*LPLKSH
Trigger: ATGACTCTTCAGAGGAAGCAATTCGTACGCTTGATC...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATATATGTATCCAGTCTaGCAGCCTTCAGAAAGTGGG +
Preference number: 5 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRYMYPV*QPSESG
Trigger: CCCACTTTCTGAAGGCTGCAAGACTGGATACATATA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAATATATGTATCCAGTCTaGCAGCCTTCAGAAAGTGGG +
Preference number: 5 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKYMYPV*QPSESG
Trigger: CCCACTTTCTGAAGGCTGCAAGACTGGATACATATA...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAAACGATTCCCAACAATaGAAGTCCTTTGGGTCTGCT +
Preference number: 5 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKNDSQQ*KSFGSA
Trigger: AGCAGACCCAAAGGACTTCAATTGTTGGGAATCGTT...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAATTCATCTGGAGGATGTaGTACTGGTACAGCTCTGTT +
Preference number: 5 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKFIWRM*YWYSSV
Trigger: AACAGAGCTGTACCAGTACAACATCCTCCAGATGAA...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAGTCAAGATATGGGCTTaGTCTTGCTCCGATTCAACA +
Preference number: 5 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKVKIWA*SCSDST
Trigger: TGTTGAATCGGAGCAAGACAAAGCCCATATCTTGAC...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAATTTAGATATTTGTTTTaGCACAGCCACACTGCGGCC +
Preference number: 5 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKFRYLF*HSHTAA
Trigger: GGCCGCAGTGTGGCTGTGCAAAAACAAATATCTAAA...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATCCCTTTGCATTTCGTaGAGCATACTGTGCAACAAC +
Preference number: 5 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRSLCIS*SILCNN
Trigger: GTTGTTGCACAGTATGCTCAACGAAATGCAAAGGGA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGACTACAACACCTCCCTTaGCATTTCGTTGAGCATACT +
Preference number: 5 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRLQHLP*HFVEHT
Trigger: AGTATGCTCAACGAAATGCAAAGGGAGGTGTTGTAG...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTCTACAACACCTCCCTTaGCATTTCGTTGAGCATACT +
Preference number: 5 (lower is better)
Translates to: FSQIWETPDENSVQLLTSLQHLP*HFVEHT
Trigger: AGTATGCTCAACGAAATGCAAAGGGAGGTGTTGTAG...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CAA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAAGCTCTCATCATTCCTaGGGATTGATACACATGTGC +
Preference number: 5 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKSSHHS*GLIHMC
Trigger: GCACATGTGTATCAATCCCAAGGAATGATGAGAGCT...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAATTTCTCATACAAGTTaGCTAACCCCTGCCAAGCTA +
Preference number: 5 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKISHTS*LTPAKL
Trigger: TAGCTTGGCAGGGGTTAGCAAACTTGTATGAGAAAT...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAATCTATGCATTTTGACTaGGGCTTCTGCCAGATGATA +
Preference number: 5 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKSMHFD*GFCQMI
Trigger: TATCATCTGGCAGAAGCCCAAGTCAAAATGCATAGA...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATATAACACTCCCAAGTaGGTCCATGCAACAGCATTA +
Preference number: 5 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRYNTPK*VHATAL
Trigger: TAATGCTGTTGCATGGACCAACTTGGGAGTGTTATA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATCTGTTGCTTTTATCTaGCAATGTTGTGCAGACCCA +
Preference number: 5 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRSVAFI*QCCADP
Trigger: TGGGTCTGCACAACATTGCAAGATAAAAGCAACAGA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAACCCTTTGGTATGCATTaGCTGCTTCCTTTTTCAGTT +
Preference number: 5 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKPFGMH*LLPFSV
Trigger: AACTGAAAAAGGAAGCAGCAAATGCATACCAAAGGG...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTCCCTTTGGTATGCATTaGCTGCTTCCTTTTTCAGTT +
Preference number: 5 (lower is better)
Translates to: FSQIWETPDENSVQLLTSPFGMH*LLPFSV
Trigger: AACTGAAAAAGGAAGCAGCAAATGCATACCAAAGGG...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CAA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGACAACAAAATTGCCCTTaGGTATGCATTTGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRQQNCP*VCICCF
Trigger: GAAGCAGCAAATGCATACCAAAGGGCAATTTTGTTG...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAGATATGGGCTTTGTCTaGCTCCGATTCAACAATAGA +
Preference number: 5 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKDMGFV*LRFNNR
Trigger: TCTATTGTTGAATCGGAGCAAGACAAAGCCCATATC...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGACCTTCTTTCCATGATTaGAGTCCAGAATATGAGCCA +
Preference number: 5 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRPSFHD*SPEYEP
Trigger: TGGCTCATATTCTGGACTCAAATCATGGAAAGAAGG...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTCCTTCTTTCCATGATTaGAGTCCAGAATATGAGCCA +
Preference number: 5 (lower is better)
Translates to: FSQIWETPDENSVQLLTSPSFHD*SPEYEP
Trigger: TGGCTCATATTCTGGACTCAAATCATGGAAAGAAGG...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CAA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAATCAGTTCCAATGCTCTaGTATCTCCATGAGTTTTGG +
Preference number: 5 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKSVPML*YLHEFW
Trigger: CCAAAACTCATGGAGATACAAGAGCATTGGAACTGA...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATTCATTTTCTGCACCTaGTTCCTGCCGTGTTTTTAT +
Preference number: 5 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRFIFCT*FLPCFY
Trigger: ATAAAAACACGGCAGGAACAAGGTGCAGAAAATGAA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp TCCTTATATTTGCCTAGGATTTGCTGTATTGCTGCAACCTTAAACACACTGTATATGCCTATAAAGTACTaGGTGATCTTCACTAGGAAT +
Preference number: 5 (lower is better)
Translates to: SLYLPRICCIAATLNTLYMPIKY*VIFTRN
Trigger: ATTCCTAGTGAAGATCACCAAGTACTTTATAGGCAT...ATACAGTGTGTTTAAGGTTGCAGCAATACAGCAAATCCTAGGCAAATATAAGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505578.5
CDS-3UTR CAA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAATGATCATCTGGTATaGAGCTACAGCCTCCTTATA +
Preference number: 5 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRNDHLV*SYSLLI
Trigger: TATAAGGAGGCTGTAGCTCAATACCAGATGATCATT...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTAATGATCATCTGGTATaGAGCTACAGCCTCCTTATA +
Preference number: 5 (lower is better)
Translates to: FSQIWETPDENSVQLLTSNDHLV*SYSLLI
Trigger: TATAAGGAGGCTGTAGCTCAATACCAGATGATCATT...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CAA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAATTAAGATCATTCATGTaGCTGCCTGTTTCTGCTAGA +
Preference number: 5 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKLRSFM*LPVSAR
Trigger: TCTAGCAGAAACAGGCAGCAACATGAATGATCTTAA...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAGAAAGCCTCATGAGCTaGCTCAATGTTTTCATTTGT +
Preference number: 5 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRESLMS*LNVFIC
Trigger: ACAAATGAAAACATTGAGCAAGCTCATGAGGCTTTC...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATTTTATCTTGCAATGTaGTGCAGACCCAATACGCAT +
Preference number: 5 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRFYLAM*CRPNTH
Trigger: ATGCGTATTGGGTCTGCACAACATTGCAAGATAAAA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAATTTTATCTTGCAATGTaGTGCAGACCCAATACGCAT +
Preference number: 5 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKFYLAM*CRPNTH
Trigger: ATGCGTATTGGGTCTGCACAACATTGCAAGATAAAA...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAATCTCTTGCCCCCATTTaGCGTTTGAATTGTAACAAA +
Preference number: 5 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKSLAPI*RLNCNK
Trigger: TTTGTTACAATTCAAACGCAAAATGGGGGCAAGAGA...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATCTCTTGCCCCCATTTaGCGTTTGAATTGTAACAAA +
Preference number: 5 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRSLAPI*RLNCNK
Trigger: TTTGTTACAATTCAAACGCAAAATGGGGGCAAGAGA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTTCTAAAATATCTGTCTaGCTCCAAATCACTGCAGCA +
Preference number: 5 (lower is better)
Translates to: FSQIWETPDENSVQLLTSSKISV*LQITAA
Trigger: TGCTGCAGTGATTTGGAGCAAGACAGATATTTTAGA...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS TCA 90 bp AATTTGATTGTTCCTTACCCATTTTCCATCTATATAAATGTGGAATaGGGTACTCAATGGAAGTGTTTCCCATCACTGGAGATGAAAAAG +
Preference number: 5 (lower is better)
Translates to: NLIVPYPFSIYINVE*GTQWKCFPSLEMKK
Trigger: CTTTTTCATCTCCAGTGATGGGAAACACTTCCATTGAGTACCTCATTCCACATTTATATAGATGGAAAATGGGTAAGGAACAATCAAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CAA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAATGCCTATAAAGTACTaGGTGATCTTCACTAGGAAT +
Preference number: 5 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRMPIKY*VIFTRN
Trigger: ATTCCTAGTGAAGATCACCAAGTACTTTATAGGCAT...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAATCTGTAACAACAAAATaGCCCTTTGGTATGCATTTG +
Preference number: 5 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKSVTTK*PFGMHL
Trigger: CAAATGCATACCAAAGGGCAATTTTGTTGTTACAGA...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATCTGTAACAACAAAATaGCCCTTTGGTATGCATTTG +
Preference number: 5 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRSVTTK*PFGMHL
Trigger: CAAATGCATACCAAAGGGCAATTTTGTTGTTACAGA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAATTAAATAGCAATGTCTaGGCTACATCCGTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKLNSNV*ATSVFP
Trigger: AGGAAAAACGGATGTAGCCAAGACATTGCTATTTAA...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGATTACTGTCTTTGTGTTaGATGTGCTTCAGTAACTCA +
Preference number: 5 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRLLSLC*MCFSNS
Trigger: TGAGTTACTGAAGCACATCAAACACAAAGACAGTAA...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp ATTGTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAACAGCTTTAGATATTaGTTTTTGCACAGCCACACT +
Preference number: 5 (lower is better)
Translates to: IVRDYSKRYSIVHHARCRNSFRY*FLHSHT
Trigger: AGTGTGGCTGTGCAAAAACAAATATCTAAAGCTGTT...TCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTACAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS-3UTR CAA 90 bp TTCAGCCAGATTTGGGAAACACCAGATGAAAATTCAGTTCAATTATTAACCTCTAACAGCTTTAGATATTaGTTTTTGCACAGCCACACT +
Preference number: 5 (lower is better)
Translates to: FSQIWETPDENSVQLLTSNSFRY*FLHSHT
Trigger: AGTGTGGCTGTGCAAAAACAAATATCTAAAGCTGTT...AGAGGTTAATAATTGAACTGAATTTTCATCTGGTGTTTCCCAAATCTGGCTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS-3UTR CAA 90 bp GTAAGGGATTACAGTAAAAGATATTCTATTGTGCACCATGCAAGATGCAGAAAAGTAAAAGATATTCTATaGTGCACCATGCAAGATGCA +
Preference number: 5 (lower is better)
Translates to: VRDYSKRYSIVHHARCRKVKDIL*CTMQDA
Trigger: TGCATCTTGCATGGTGCACAATAGAATATCTTTTAC...TTTTCTGCATCTTGCATGGTGCACAATAGAATATCTTTTACTGTAATCCCTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS TCA 72 bp GCATCCTGCATTGCCAACCCTAGAGCACACAGGGCTTaGAGGCTTTCTGTGGTTGGTTCCTTTAAGATAGAG +
Preference number: 6 (lower is better)
Translates to: ASCIANPRAHRA*RLSVVGSFKIE
Trigger: CTCTATCTTAAAGGAACCAACCACAGAAAGCCTTCAAGCCCTGTGTGCTCTAGGGTTGGCAATGCAGGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS CAA 72 bp GTAACACATCTCTGCAGCTCTCATCATTCCTTGGGATaGATACACATGTGCCAGCCACTGCCAAGCTGGAAC +
Preference number: 6 (lower is better)
Translates to: VTHLCSSHHSLG*IHMCQPLPSWN
Trigger: GTTCCAGCTTGGCAGTGGCTGGCACATGTGTATCAATCCCAAGGAATGATGAGAGCTGCAGAGATGTGTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS GCA 72 bp AGAATCAAACGGGATAAAATGCAGAAAACAGAGCCTTaGCTGATGGGCTGGCTTTCCCTTCCTCAGCACCAT +
Preference number: 6 (lower is better)
Translates to: RIKRDKMQKTEP*LMGWLSLPQHH
Trigger: ATGGTGCTGAGGAAGGGAAAGCCAGCCCATCAGGCAAGGCTCTGTTTTCTGCATTTTATCCCGTTTGATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512026.5
CDS CAA 72 bp AGACTTTTAATGCAAGTAGTGCTAGTCTCAACAGACTaGAGAGCTTCCCACTCCAACTGCCCCGTTGGGATG +
Preference number: 6 (lower is better)
Translates to: RLLMQVVLVSTD*RASHSNCPVGM
Trigger: CATCCCAACGGGGCAGTTGGAGTGGGAAGCTCTCAAGTCTGTTGAGACTAGCACTACTTGCATTAAAAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS TCA 72 bp CACAGCCACACTGCGGCCTTGGAGTGCATAAATCGCTaGTGTAAGAAGGCACCTCTGATAATTACTGTCTTT +
Preference number: 6 (lower is better)
Translates to: HSHTAALECINR*CKKAPLIITVF
Trigger: AAAGACAGTAATTATCAGAGGTGCCTTCTTACATCAGCGATTTATGCACTCCAAGGCCGCAGTGTGGCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS TCA 72 bp CGTGCAGTTGATGCAATAGATTTGGGATACCCAGGCTaGTATACCACTCTTTCCAAAAGACGCCGTGTCTCT +
Preference number: 6 (lower is better)
Translates to: RAVDAIDLGYPG*YTTLSKRRRVS
Trigger: AGAGACACGGCGTCTTTTGGAAAGAGTGGTATATCAGCCTGGGTATCCCAAATCTATTGCATCAACTGCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS GCA 72 bp AGCTTCTTTAGGTCTATGCATTTTGACTTGGGCTTCTaGCAGATGATACCATCCACTTGTGCAGACAGGGCT +
Preference number: 6 (lower is better)
Translates to: SFFRSMHFDLGF*QMIPSTCADRA
Trigger: AGCCCTGTCTGCACAAGTGGATGGTATCATCTGGCAGAAGCCCAAGTCAAAATGCATAGACCTAAAGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358746.7
ENST00000503279.1
ENST00000504421.1
ENST00000514952.5
ENST00000649566.1
CDS GCA 72 bp CCAGCTAGCTTCCAGAGGCAGGACACATCAGCTCGATaGTGTAGAGCACAAGTAAAATATTCCAGTGCTTTT +
Preference number: 6 (lower is better)
Translates to: PASFQRQDTSAR*CRAQVKYSSAF
Trigger: AAAAGCACTGGAATATTTTACTTGTGCTCTACAGCATCGAGCTGATGTGTCCTGCCTCTGGAAGCTAGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358746.7
ENST00000507805.5
ENST00000649566.1
CDS GCA 72 bp TACAACACCTCCCTTTGCATTTCGTTGAGCATACTGTaGAACAACTCGAGACAACAGAGACCAAAGAGCAGG +
Preference number: 6 (lower is better)
Translates to: YNTSLCISLSIL*NNSRQQRPKSR
Trigger: CCTGCTCTTTGGTCTCTGTTGTCTCGAGTTGTTGCACAGTATGCTCAACGAAATGCAAAGGGAGGTGTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS CAA 90 bp AGCCAGTGGACAAAAGCAAAGCTTCAAGGCCTCAGTTGTAGCCTCTaGAACCAAAGATGGCCAGTGATCATTGGAAATGTTAGCCATACA +
Preference number: 6 (lower is better)
Translates to: SQWTKAKLQGLSCSL*NQRWPVIIGNVSHT
Trigger: TGTATGGCTAACATTTCCAATGATCACTGGCCATCTTTGGTTCAAGAGGCTACAACTGAGGCCTTGAAGCTTTGCTTTTGTCCACTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS GCA 72 bp TCTGCACCTTGTTCCTGCCGTGTTTTTATCAACTTGTaGCATGTTCGAGCCACCTCTAGGTGTTTCTTTTCT +
Preference number: 6 (lower is better)
Translates to: SAPCSCRVFINL*HVRATSRCFFS
Trigger: AGAAAAGAAACACCTAGAGGTGGCTCGAACATGGCACAAGTTGATAAAAACACGGCAGGAACAAGGTGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358746.7
ENST00000514952.5
ENST00000515207.1
ENST00000649566.1
CDS GCA 72 bp CAGCACAACGTCTCTAAGGCTCTAAAATATCTGTCTTaGTCCAAATCACTGCAGCACCTGCTCCTATTGACA +
Preference number: 6 (lower is better)
Translates to: QHNVSKALKYLS*SKSLQHLLLLT
Trigger: TGTCAATAGGAGCAGGTGCTGCAGTGATTTGGAGCAAGACAGATATTTTAGAGCCTTAGAGACGTTGTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS CCA 72 bp CTTCAAGGCCTCAGTTGTAGCCTCTTGAACCAAAGATaGCCAGTGATCATTGGAAATGTTAGCCATACAGAC +
Preference number: 6 (lower is better)
Translates to: LQGLSCSLLNQR*PVIIGNVSHTD
Trigger: GTCTGTATGGCTAACATTTCCAATGATCACTGGCCATCTTTGGTTCAAGAGGCTACAACTGAGGCCTTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS CAA 72 bp ACCAGGGTTGCTGTGAACAGCTTTAGATATTTGTTTTaGCACAGCCACACTGCGGCCTTGGAGTGCATAAAT +
Preference number: 6 (lower is better)
Translates to: TRVAVNSFRYLF*HSHTAALECIN
Trigger: ATTTATGCACTCCAAGGCCGCAGTGTGGCTGTGCAAAAACAAATATCTAAAGCTGTTCACAGCAACCCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS TCA 72 bp CAAGGGCATGAACTTCAGCTTTGCAGCTTCATCAAATaGACCTTTGTTCCGATAGGCCAAGCTTTTGAGAAC +
Preference number: 6 (lower is better)
Translates to: QGHELQLCSFIK*TFVPIGQAFEN
Trigger: GTTCTCAAAAGCTTGGCCTATCGGAACAAAGGTTCATTTGATGAAGCTGCAAAGCTGAAGTTCATGCCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513232.1
CDS CAA 72 bp TTTTCTGCACCTTGTTCCTGCCGTGTTTTTATCAACTaGTGCCATGTTCGAGCCACCTCTAGGTGTTTCTTT +
Preference number: 6 (lower is better)
Translates to: FSAPCSCRVFIN*CHVRATSRCFF
Trigger: AAAGAAACACCTAGAGGTGGCTCGAACATGGCACAAGTTGATAAAAACACGGCAGGAACAAGGTGCAGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358746.7
ENST00000514952.5
ENST00000515207.1
ENST00000649566.1
CDS TCA 72 bp TTTTCATCTTCTGCTGAACTGCTTCCCATAGCCAACTaGTTTACCGCAGTGTACAGTAATGCCTTCTTTCCA +
Preference number: 6 (lower is better)
Translates to: FSSSAELLPIAN*FTAVYSNAFFP
Trigger: TGGAAAGAAGGCATTACTGTACACTGCGGTAAATCAGTTGGCTATGGGAAGCAGTTCAGCAGAAGATGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358746.7
ENST00000502768.1
ENST00000649566.1
CDS CCA 72 bp GTTCCGATAGGCCAAGCTTTTGAGAACCAAAAGTCCTaGGATATTATCTGCATCAGAAATCTGATCAAGCGT +
Preference number: 6 (lower is better)
Translates to: VPIGQAFENQKS*DIICIRNLIKR
Trigger: ACGCTTGATCAGATTTCTGATGCAGATAATATCCCAGGACTTTTGGTTCTCAAAAGCTTGGCCTATCGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358746.7
ENST00000514952.5
ENST00000649566.1
CDS CAA 72 bp AGTTATTGCCAGAGCTGTCAAGATATGGGCTTTGTCTaGCTCCGATTCAACAATAGACAAGGCTCTCTCATA +
Preference number: 6 (lower is better)
Translates to: SYCQSCQDMGFV*LRFNNRQGSLI
Trigger: TATGAGAGAGCCTTGTCTATTGTTGAATCGGAGCAAGACAAAGCCCATATCTTGACAGCTCTGGCAATAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358746.7
ENST00000508181.5
ENST00000649566.1
CDS CAA 72 bp TATTCAGTTATTGCCAGAGCTGTCAAGATATGGGCTTaGTCTTGCTCCGATTCAACAATAGACAAGGCTCTC +
Preference number: 6 (lower is better)
Translates to: YSVIARAVKIWA*SCSDSTIDKAL
Trigger: GAGAGCCTTGTCTATTGTTGAATCGGAGCAAGACAAAGCCCATATCTTGACAGCTCTGGCAATAACTGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358746.7
ENST00000508181.5
ENST00000649566.1
CDS CAA 72 bp ACAAAAGCAAAGCTTCAAGGCCTCAGTTGTAGCCTCTaGAACCAAAGATGGCCAGTGATCATTGGAAATGTT +
Preference number: 6 (lower is better)
Translates to: TKAKLQGLSCSL*NQRWPVIIGNV
Trigger: AACATTTCCAATGATCACTGGCCATCTTTGGTTCAAGAGGCTACAACTGAGGCCTTGAAGCTTTGCTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS TCA 72 bp GAGAAGGTCTTCCATAATCTTTGCAGCTTCATCAAATaGACCTTTGTTCCGATAGGCCAAGCTTTTGAGAAC +
Preference number: 6 (lower is better)
Translates to: EKVFHNLCSFIK*TFVPIGQAFEN
Trigger: GTTCTCAAAAGCTTGGCCTATCGGAACAAAGGTTCATTTGATGAAGCTGCAAAGATTATGGAAGACCTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358746.7
ENST00000514952.5
ENST00000649566.1
CDS TCA 72 bp GATAACAGTGCCAAGTATAAATCTATCCTCTTTGGCTaGGTGTTGTTCACTAAGGCCAGTTTATCATCAGCG +
Preference number: 6 (lower is better)
Translates to: DNSAKYKSILFG*VLFTKASLSSA
Trigger: CGCTGATGATAAACTGGCCTTAGTGAACAACACTCAGCCAAAGAGGATAGATTTATACTTGGCACTGTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358746.7
ENST00000502768.1
ENST00000649566.1
CDS CAA 90 bp TTTATATTCAGTTATTGCCAGAGCTGTCAAGATATGGGCTTTGTCTaGCTCCGATTCAACAATAGACAAGGCTCTCTCATAGGCTTTGCT +
Preference number: 6 (lower is better)
Translates to: FIFSYCQSCQDMGFV*LRFNNRQGSLIGFA
Trigger: AGCAAAGCCTATGAGAGAGCCTTGTCTATTGTTGAATCGGAGCAAGACAAAGCCCATATCTTGACAGCTCTGGCAATAACTGAATATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358746.7
ENST00000508181.5
ENST00000649566.1
CDS CAA 90 bp GCAATGTCTTGGCTACATCCGTTTTTCCTTGTTTATATTCAGTTATaGCCAGAGCTGTCAAGATATGGGCTTTGTCTTGCTCCGATTCAA +
Preference number: 6 (lower is better)
Translates to: AMSWLHPFFLVYIQL*PELSRYGLCLAPIQ
Trigger: TTGAATCGGAGCAAGACAAAGCCCATATCTTGACAGCTCTGGCAATAACTGAATATAAACAAGGAAAAACGGATGTAGCCAAGACATTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS CAA 90 bp ACACCACTTCTGCTTGTCAACACTCTCATAAAGATCCAGGAGCTTTaGGTAAACACCAGGCAAGTCATCCTTAGCATTTATGTGATTATA +
Preference number: 6 (lower is better)
Translates to: TPLLLVNTLIKIQEL*VNTRQVILSIYVII
Trigger: TATAATCACATAAATGCTAAGGATGACTTGCCTGGTGTTTACCAAAAGCTCCTGGATCTTTATGAGAGTGTTGACAAGCAGAAGTGGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358746.7
ENST00000514952.5
ENST00000515207.1
ENST00000649566.1
CDS TCA 72 bp GTTCCTTACCCATTTTCCATCTATATAAATGTGGAATaGGGTACTCAATGGAAGTGTTTCCCATCACTGGAG +
Preference number: 6 (lower is better)
Translates to: VPYPFSIYINVE*GTQWKCFPSLE
Trigger: CTCCAGTGATGGGAAACACTTCCATTGAGTACCTCATTCCACATTTATATAGATGGAAAATGGGTAAGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649566.1
CDS CAA 72 bp TGGCTACATCCGTTTTTCCTTGTTTATATTCAGTTATaGCCAGAGCTGTCAAGATATGGGCTTTGTCTTGCT +
Preference number: 6 (lower is better)
Translates to: WLHPFFLVYIQL*PELSRYGLCLA
Trigger: AGCAAGACAAAGCCCATATCTTGACAGCTCTGGCAATAACTGAATATAAACAAGGAAAAACGGATGTAGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000649566.1
CDS CCA 72 bp TCTTCTAACACTTCAAGGGGTGTTGACTTAAAAGCCTaGATAGCTTTATCATATTCACCAGTGGAACATAAC +
Preference number: 6 (lower is better)
Translates to: SSNTSRGVDLKA*IALSYSPVEHN
Trigger: GTTATGTTCCACTGGTGAATATGATAAAGCTATCCAGGCTTTTAAGTCAACACCCCTTGAAGTGTTAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358746.7
ENST00000508181.5
ENST00000512026.5
ENST00000649566.1
CDS CAA 72 bp TCAATGTTTTCATTTGTGAGGTATAACACTCCCAAGTaGGTCCATGCAACAGCATTAATTTGTTCTGACTGG +
Preference number: 6 (lower is better)
Translates to: SMFSFVRYNTPK*VHATALICSDW
Trigger: CCAGTCAGAACAAATTAATGCTGTTGCATGGACCAACTTGGGAGTGTTATACCTCACAAATGAAAACATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358746.7
ENST00000506007.1
ENST00000507805.5
ENST00000508181.5
ENST00000649566.1
CDS CAA 90 bp ACTTTTACCAATTATTACCACCTCTATATTCTTCCCGAATTGAATTaGATTGTTCCTTACCCATTTTCCATCTGGAGCAGATGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: TFTNYYHLYILPELN*IVPYPFSIWSRCSS
Trigger: AGAGGAGCATCTGCTCCAGATGGAAAATGGGTAAGGAACAATCAAATTCAATTCGGGAAGAATATAGAGGTGGTAATAATTGGTAAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000514952.5
CDS CAA 90 bp TATCATATTCACCAGTGGAACATAACAATCTGCCGTAATTTCTTATaGCAACATTGTAAGTATCTTGGTCTTCTGCAGTCTTTGGTATGC +
Preference number: 6 (lower is better)
Translates to: YHIHQWNITICRNFL*QHCKYLGLLQSLVC
Trigger: GCATACCAAAGACTGCAGAAGACCAAGATACTTACAATGTTGCAATAAGAAATTACGGCAGATTGTTATGTTCCACTGGTGAATATGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508181.5
CDS CAA 90 bp TATCATATTCACCAGTGGAACATAACAATCTGCCGTAATTTCTTATaGCAACATTGTAAGTATCTTGGTCTTCTGCAGTCTGTAACAACA +
Preference number: 6 (lower is better)
Translates to: YHIHQWNITICRNFL*QHCKYLGLLQSVTT
Trigger: TGTTGTTACAGACTGCAGAAGACCAAGATACTTACAATGTTGCAATAAGAAATTACGGCAGATTGTTATGTTCCACTGGTGAATATGATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358746.7
ENST00000512026.5
ENST00000649566.1
CDS TCA 72 bp CCTTATATGTCAACCCAAAAAGTATCAAAAATACCTTaGCTGCATGAAAGAACAGCTTCTTTAGGTCTATGC +
Preference number: 6 (lower is better)
Translates to: PYMSTQKVSKIP*LHERTASLGLC
Trigger: GCATAGACCTAAAGAAGCTGTTCTTTCATGCAGTCAAGGTATTTTTGATACTTTTTGGGTTGACATATAAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000503279.1
CDS TCA 72 bp ACATTAAATAAGATGGATCAAGGGATTGAGCCATTTTaGAAGCCTCATGAGCTTGCTCTCATCATAAATATG +
Preference number: 6 (lower is better)
Translates to: TLNKMDQGIEPF*KPHELALIINM
Trigger: CATATTTATGATGAGAGCAAGCTCATGAGGCTTTCAAAATGGCTCAATCCCTTGATCCATCTTATTTAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515176.5
CDS CAA 72 bp AATTATTACCACCTCTATATTCTTCCCGAATTGAATTaGATTGTTCCTTACCCATTTTCCATCTGGAGCAGA +
Preference number: 6 (lower is better)
Translates to: NYYHLYILPELN*IVPYPFSIWSR
Trigger: TCTGCTCCAGATGGAAAATGGGTAAGGAACAATCAAATTCAATTCGGGAAGAATATAGAGGTGGTAATAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358746.7
ENST00000514952.5