RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTC34 (Homo sapiens)

Ensembl gene IDs: ENSG00000215912, ENSG00000275571

Ensembl transcript IDs: ENST00000401095.8, ENST00000611612.2, ENST00000629910.1, ENST00000637179.1

Found 522 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCCGCAGGAGGTGGCCCACCCACTCAGCCTGCCTGGGCCACACCTaGCTGTTCACCAGCTCAGCCTGTGGCTGGGCTGGGCATGTTCCA +
Preference number: 1 (lower is better)
Translates to: CRRRWPTHSACLGHT*LFTSSACGWAGHVP
Trigger: TGGAACATGCCCAGCCCAGCCACAGGCTGAGCTGGTGAACAGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR GCA 90 bp TCCCAGCAGCTTCGGGAGACAGGTCTGGTGGGAGCCTGGGGACTGTaGTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGGGAGGG +
Preference number: 1 (lower is better)
Translates to: SQQLRETGLVGAWGL*SSGPLGGPSAWKGG
Trigger: CCCTCCCTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCCCACCAGACCTGTCTCCCGAAGCTGCTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR GCA 90 bp CTCCCCACTGCCTCCACCTGGCCCCGACATTGGAGCAGGCCCTTCTaGTGTGACCAGGCTCTCTGGACCAGCCCTTGCCTCCTCTGCCTC +
Preference number: 1 (lower is better)
Translates to: LPTASTWPRHWSRPF*CDQALWTSPCLLCL
Trigger: GAGGCAGAGGAGGCAAGGGCTGGTCCAGAGAGCCTGGTCACAGCAGAAGGGCCTGCTCCAATGTCGGGGCCAGGTGGAGGCAGTGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR GCA 90 bp GCCCCTCCAGGCGGGACACCCAGGCCTCAGGGACGAGTGCGTCCATaGCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGA +
Preference number: 1 (lower is better)
Translates to: APPGGTPRPQGRVRP*LKGCWLWVSAWSWR
Trigger: TCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATGGACGCACTCGTCCCTGAGGCCTGGGTGTCCCGCCTGGAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 90 bp GGGCCCTCTCCCACTGTGGGCTGCCCATCCCCGAGGTACTCAAGGTaGGAGGCACTGACCCTTTACCCAGACCCCTGTGGCCAGAGACAC +
Preference number: 1 (lower is better)
Translates to: GPSPTVGCPSPRYSR*EALTLYPDPCGQRH
Trigger: GTGTCTCTGGCCACAGGGGTCTGGGTAAAGGGTCAGTGCCTCCCACCTTGAGTACCTCGGGGATGGGCAGCCCACAGTGGGAGAGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 90 bp GAGGAGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTGCACGGATaGATGGGGCAGGACATCCCAGGCGAGGAGGACGGTAGGAGCAGG +
Preference number: 1 (lower is better)
Translates to: EEPQRGWHLHSALHG*MGQDIPGEEDGRSR
Trigger: CCTGCTCCTACCGTCCTCCTCGCCTGGGATGTCCTGCCCCATCCATCCGTGCAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR GCA 90 bp AGGTCCAGGAGGAGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTaGACGGATGGATGGGGCAGGACATCCCAGGCGAGGAGGACGGTA +
Preference number: 1 (lower is better)
Translates to: RSRRSLSGAGIYTQP*TDGWGRTSQARRTV
Trigger: TACCGTCCTCCTCGCCTGGGATGTCCTGCCCCATCCATCCGTGCAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTCCTGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR GCA 90 bp GACCCCAGCAGGGATGGGATAAGGGGAACCGAGACTCACCCACTGTaGTCAGGGCAGAGGTGGTGGGCCGCGGGAACGGGCATGTCTTTG +
Preference number: 1 (lower is better)
Translates to: DPSRDGIRGTETHPL*SGQRWWAAGTGMSL
Trigger: CAAAGACATGCCCGTTCCCGCGGCCCACCACCTCTGCCCTGAGCACAGTGGGTGAGTCTCGGTTCCCCTTATCCCATCCCTGCTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR GCA 90 bp GTGGACATGCCCCTCCAGGCGGGACACCCAGGCCTCAGGGACGAGTaGGTCCATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGT +
Preference number: 1 (lower is better)
Translates to: VDMPLQAGHPGLRDE*VHALRAAGCGCLLG
Trigger: ACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATGGACGCACTCGTCCCTGAGGCCTGGGTGTCCCGCCTGGAGGGGCATGTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 90 bp ACTGATACCTCCCAGCAGCTTCGGGAGACAGGTCTGGTGGGAGCCTaGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGG +
Preference number: 1 (lower is better)
Translates to: TDTSQQLRETGLVGA*GLCSSGPLGGPSAW
Trigger: CCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCCCACCAGACCTGTCTCCCGAAGCTGCTGGGAGGTATCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 90 bp AGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTGCACGGATGGATaGGGCAGGACATCCCAGGCGAGGAGGACGGTAGGAGCAGGGAAC +
Preference number: 1 (lower is better)
Translates to: SLSGAGIYTQPCTDG*GRTSQARRTVGAGN
Trigger: GTTCCCTGCTCCTACCGTCCTCCTCGCCTGGGATGTCCTGCCCCATCCATCCGTGCAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 90 bp TCTGTGGAAGCACTGATACCTCCCAGCAGCTTCGGGAGACAGGTCTaGTGGGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTC +
Preference number: 1 (lower is better)
Translates to: SVEALIPPSSFGRQV*WEPGDCAHQGPSVV
Trigger: GACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCCCACCAGACCTGTCTCCCGAAGCTGCTGGGAGGTATCAGTGCTTCCACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 90 bp GGGATAAGGGGAACCGAGACTCACCCACTGTGCTCAGGGCAGAGGTaGTGGGCCGCGGGAACGGGCATGTCTTTGTCTATCTGGACTGCC +
Preference number: 1 (lower is better)
Translates to: GIRGTETHPLCSGQR*WAAGTGMSLSIWTA
Trigger: GGCAGTCCAGATAGACAAAGACATGCCCGTTCCCGCGGCCCACCACCTCTGCCCTGAGCACAGTGGGTGAGTCTCGGTTCCCCTTATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR GCA 90 bp GGGACACCCAGGCCTCAGGGACGAGTGCGTCCATGCCTTAAGGGCTaGTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCTCAGG +
Preference number: 1 (lower is better)
Translates to: GTPRPQGRVRPCLKG*WLWVSAWSWRNYLR
Trigger: CCTGAGGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATGGACGCACTCGTCCCTGAGGCCTGGGTGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 90 bp GAGAAACACAGCGATCCTGAGGTCCAGGAGGAGCCTCAGCGGGGCTaGCATCTACACTCAGCCTTGCACGGATGGATGGGGCAGGACATC +
Preference number: 1 (lower is better)
Translates to: EKHSDPEVQEEPQRG*HLHSALHGWMGQDI
Trigger: GATGTCCTGCCCCATCCATCCGTGCAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTCCTGGACCTCAGGATCGCTGTGTTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 90 bp ATAAGGGGAACCGAGACTCACCCACTGTGCTCAGGGCAGAGGTGGTaGGCCGCGGGAACGGGCATGTCTTTGTCTATCTGGACTGCCCCA +
Preference number: 1 (lower is better)
Translates to: IRGTETHPLCSGQRW*AAGTGMSLSIWTAP
Trigger: TGGGGCAGTCCAGATAGACAAAGACATGCCCGTTCCCGCGGCCCACCACCTCTGCCCTGAGCACAGTGGGTGAGTCTCGGTTCCCCTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR GCA 90 bp CCTCCTCTGCCTCAGTGCCGACTGGCCCACCTGACCCGAGGAACTTaGGTGTCCCTGAACTTAGCTCTTGGGCTGCTGACAGGTGTTTGT +
Preference number: 1 (lower is better)
Translates to: PPLPQCRLAHLTRGT*VSLNLALGLLTGVC
Trigger: ACAAACACCTGTCAGCAGCCCAAGAGCTAAGTTCAGGGACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGCACTGAGGCAGAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 90 bp TTTGGGAGCTCTGTCTCTGGAGAGGGCTCAGGCTCTACTGGAGGCTaGCCCAAGGCTCAGGGTCCAAGCAAAACGCAGCTTCACACCCAG +
Preference number: 1 (lower is better)
Translates to: FGSSVSGEGSGSTGG*PKAQGPSKTQLHTQ
Trigger: CTGGGTGTGAAGCTGCGTTTTGCTTGGACCCTGAGCCTTGGGCCAGCCTCCAGTAGAGCCTGAGCCCTCTCCAGAGACAGAGCTCCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 90 bp GAGGTACTCAAGGTGGGAGGCACTGACCCTTTACCCAGACCCCTGTaGCCAGAGACACATAGGCGGTGCCAGCTGATGAAGGTGCATGGG +
Preference number: 1 (lower is better)
Translates to: EVLKVGGTDPLPRPL*PETHRRCQLMKVHG
Trigger: CCCATGCACCTTCATCAGCTGGCACCGCCTATGTGTCTCTGGCCACAGGGGTCTGGGTAAAGGGTCAGTGCCTCCCACCTTGAGTACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 90 bp CCCAAGATGAAGGTGCCAGCTCGCTCTCTAGTGAGGATCCCTTCCTaGTTCACAGACAGCTTCTCACTGGGTCTCCACATGGTGGAGGGG +
Preference number: 1 (lower is better)
Translates to: PKMKVPARSLVRIPS*FTDSFSLGLHMVEG
Trigger: CCCCTCCACCATGTGGAGACCCAGTGAGAAGCTGTCTGTGAACCAGGAAGGGATCCTCACTAGAGAGCGAGCTGGCACCTTCATCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 90 bp ACACCCAGGCCTCAGGGACGAGTGCGTCCATGCCTTAAGGGCTGCTaGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCTCAGGAAA +
Preference number: 1 (lower is better)
Translates to: TPRPQGRVRPCLKGC*LWVSAWSWRNYLRK
Trigger: TTTCCTGAGGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATGGACGCACTCGTCCCTGAGGCCTGGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 90 bp TTTGTTGAGTCCTTGAGCACACGGGTGAAGACAGGGAGGGAAGGGTaGATGGGGAGCTGGCAGGCGGAAGATGGATCAAATTGGTGCCTG +
Preference number: 1 (lower is better)
Translates to: FVESLSTRVKTGREG*MGSWQAEDGSNWCL
Trigger: CAGGCACCAATTTGATCCATCTTCCGCCTGCCAGCTCCCCATCCACCCTTCCCTCCCTGTCTTCACCCGTGTGCTCAAGGACTCAACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR TCA 90 bp ACAGAGAATCAGGACTGCCATGGCCATGGAAGAGTCCCTTGTTCCTaGGAGCCTCGGGGCTGCTGCTGCTACAACTCGGATGCACAGTTT +
Preference number: 1 (lower is better)
Translates to: TENQDCHGHGRVPCS*EPRGCCCYNSDAQF
Trigger: AAACTGTGCATCCGAGTTGTAGCAGCAGCAGCCCCGAGGCTCTCAGGAACAAGGGACTCTTCCATGGCCATGGCAGTCCTGATTCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 90 bp TGCTGGCGGTCTACAGTTAATGAAGGGGAGATGCTGGAATGTCCCTaGTGTAACGTCGAGGCAGGAATCGTGCAAAGCAAGGGCCACCCT +
Preference number: 1 (lower is better)
Translates to: CWRSTVNEGEMLECP*CNVEAGIVQSKGHP
Trigger: AGGGTGGCCCTTGCTTTGCACGATTCCTGCCTCGACGTTACACCAGGGACATTCCAGCATCTCCCCTTCATTAACTGTAGACCGCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR GCA 90 bp GAGGTGGTGGGCCGCGGGAACGGGCATGTCTTTGTCTATCTGGACTaGCCCAACAGAATAGCAGAGACAGGTGGTTCATCAACAGATACT +
Preference number: 1 (lower is better)
Translates to: EVVGRGNGHVFVYLD*PNRIAETGGSSTDT
Trigger: AGTATCTGTTGATGAACCACCTGTCTCTGCTATTCTGTTGGGGCAGTCCAGATAGACAAAGACATGCCCGTTCCCGCGGCCCACCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR GCA 90 bp CTGTTCACCAGCTCAGCCTGTGGCTGGGCTGGGCATGTTCCAGCCTaGTTGTGTTATAGCTTGTACCCATGTATGGCAGTTCCCAAGTTC +
Preference number: 1 (lower is better)
Translates to: LFTSSACGWAGHVPA*LCYSLYPCMAVPKF
Trigger: GAACTTGGGAACTGCCATACATGGGTACAAGCTATAACACAAGCAGGCTGGAACATGCCCAGCCCAGCCACAGGCTGAGCTGGTGAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 90 bp GCTTCTCACTGGGTCTCCACATGGTGGAGGGGCTTGGGAGAACTCTaGGGTCTCTTTTATAAGGACACTAATCCCACTCATGAGGTTCCA +
Preference number: 1 (lower is better)
Translates to: ASHWVSTWWRGLGEL*GLFYKDTNPTHEVP
Trigger: TGGAACCTCATGAGTGGGATTAGTGTCCTTATAAAAGAGACCCCAGAGTTCTCCCAAGCCCCTCCACCATGTGGAGACCCAGTGAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 90 bp CTGGGCATGTTCCAGCCTGCTTGTGTTATAGCTTGTACCCATGTATaGCAGTTCCCAAGTTCTTGTCCCGTGTCCAAGAAGAATGAGGAG +
Preference number: 1 (lower is better)
Translates to: LGMFQPACVIACTHV*QFPSSCPVSKKNEE
Trigger: CTCCTCATTCTTCTTGGACACGGGACAAGAACTTGGGAACTGCCATACATGGGTACAAGCTATAACACAAGCAGGCTGGAACATGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR GCA 90 bp TATCACCAGTGTCGCCAGCCAGGTCACCTCTCTGAATTTTGTGGTTaGAACCTCCATGATTCCCTAGAGCTGTTTTTACCCAGAACTAAT +
Preference number: 1 (lower is better)
Translates to: YHQCRQPGHLSEFCG*NLHDSLELFLPRTN
Trigger: ATTAGTTCTGGGTAAAAACAGCTCTAGGGAATCATGGAGGTTGCAACCACAAAATTCAGAGAGGTGACCTGGCTGGCGACACTGGTGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR GCA 90 bp TCTTTTGAGTTTCTGATGAGCCTTTCCAAAGAAGGCAATCAGATATaGATCTATCTCAGCGAGCGGGGGAATGACTTTGAATGGAATTGG +
Preference number: 1 (lower is better)
Translates to: SFEFLMSLSKEGNQI*IYLSERGNDFEWNW
Trigger: CCAATTCCATTCAAAGTCATTCCCCCGCTCGCTGAGATAGATGCATATCTGATTGCCTTCTTTGGAAAGGCTCATCAGAAACTCAAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR TCA 90 bp AGAGATTCTGAATTTAATGCGCTAGCTCACATTAGCTGCTGGAAATaGCTCTACCAGTTTACTTGGTTGAATGAAATCTGGATTTGCTGG +
Preference number: 1 (lower is better)
Translates to: RDSEFNALAHISCWK*LYQFTWLNEIWICW
Trigger: CCAGCAAATCCAGATTTCATTCAACCAAGTAAACTGGTAGAGTCATTTCCAGCAGCTAATGTGAGCTAGCGCATTAAATTCAGAATCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR GCA 90 bp TACCTGCCGCAGGAGGTGGCCCACCCACTCAGCCTGCCTGGGCCACACCTGGCTACCCAGCCCTGCACCTaGCGCCTGGGGGCCCCACTT +
Preference number: 2 (lower is better)
Translates to: YLPQEVAHPLSLPGPHLATQPCT*RLGAPL
Trigger: AAGTGGGGCCCCCAGGCGGCAGGTGCAGGGCTGGGT...AGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCAGGTA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR TCA 90 bp TACCTGCCGCAGGAGGTGGCCCACCCACTCAGCCTGCCTGGGCCACACCTGGCTCCTCCAGCTGAGCACTaGGGAAGACGCAGGCCGGGG +
Preference number: 2 (lower is better)
Translates to: YLPQEVAHPLSLPGPHLAPPAEH*GRRRPG
Trigger: CCCCGGCCTGCGTCTTCCTCAGTGCTCAGCTGGAGG...AGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCAGGTA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR TCA 90 bp TACCTGCCGCAGGAGGTGGCCCACCCACTCAGCCTGCCTGGGCCACACCTGGCTTCACGGCCACGAGGATaGCCACAACCACGAGGGCTG +
Preference number: 2 (lower is better)
Translates to: YLPQEVAHPLSLPGPHLASRPRG*PQPRGL
Trigger: CAGCCCTCGTGGTTGTGGTCATCCTCGTGGCCGTGA...AGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCAGGTA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CCA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGCCAGGGAGGGGCTTCTaGGGCTGGTACCATCTCCCC +
Preference number: 2 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKPGRGF*GWYHLP
Trigger: GGGGAGATGGTACCAGCCCCAGAAGCCCCTCCCTGG...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CCA 90 bp TACCTGCCGCAGGAGGTGGCCCACCCACTCAGCCTGCCTGGGCCACACCTGGCTGAGCCTCAGCGGGGCTaGCATCTACACTCAGCCTTG +
Preference number: 2 (lower is better)
Translates to: YLPQEVAHPLSLPGPHLAEPQRG*HLHSAL
Trigger: CAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTC...AGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCAGGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR TCA 90 bp CAGCCTTGCACGGATGGATGGGGCAGGACATCCCAGGCGAGGAGGACGGTAGGAGCCGACTGGCCCACCTaGCCCGAGGAACTTGCGTGT +
Preference number: 2 (lower is better)
Translates to: QPCTDGWGRTSQARRTVGADWPT*PEELAC
Trigger: ACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGC...TCCTACCGTCCTCCTCGCCTGGGATGTCCTGCCCCATCCATCCGTGCAAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR GCA 90 bp CAGCCTTGCACGGATGGATGGGGCAGGACATCCCAGGCGAGGAGGACGGTAGGAAATAGGGCCCCTCCCTaGCTGACCCCCTGGACTGGG +
Preference number: 2 (lower is better)
Translates to: QPCTDGWGRTSQARRTVGNRAPP*LTPWTG
Trigger: CCCAGTCCAGGGGGTCAGGCAGGGAGGGGCCCTATT...TCCTACCGTCCTCCTCGCCTGGGATGTCCTGCCCCATCCATCCGTGCAAGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR GCA 90 bp TACCTGCCGCAGGAGGTGGCCCACCCACTCAGCCTGCCTGGGCCACACCTGGCTGGACGAGTGCGTCCATaGCTTAAGGGCTGCTGGTTG +
Preference number: 2 (lower is better)
Translates to: YLPQEVAHPLSLPGPHLAGRVRP*LKGCWL
Trigger: CAACCAGCAGCCCTTAAGGCATGGACGCACTCGTCC...AGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCAGGTA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CCA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGCCCGATTTAGGGAGCTaGGTACACCCCTGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKPDLGS*VHPWAW
Trigger: CCAGGCCCAGGGGTGTACCCAGCTCCCTAAATCGGG...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CCA 90 bp TACCTGCCGCAGGAGGTGGCCCACCCACTCAGCCTGCCTGGGCCACACCTGGCTCAGAAGCGAAGTGGGTaGAGAGGCAGGGGGTCTATC +
Preference number: 2 (lower is better)
Translates to: YLPQEVAHPLSLPGPHLAQKRSG*RGRGSI
Trigger: GATAGACCCCCTGCCTCTCCACCCACTTCGCTTCTG...AGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCAGGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CCA 90 bp TACCTGCCGCAGGAGGTGGCCCACCCACTCAGCCTGCCTGGGCCACACCTGGCTTTACCCAGACCCCTGTaGCCAGAGACACATAGGCGG +
Preference number: 2 (lower is better)
Translates to: YLPQEVAHPLSLPGPHLALPRPL*PETHRR
Trigger: CCGCCTATGTGTCTCTGGCCACAGGGGTCTGGGTAA...AGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCAGGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CCA 90 bp TACCTGCCGCAGGAGGTGGCCCACCCACTCAGCCTGCCTGGGCCACACCTGGCTTCAGCCTTGCACGGATaGATGGGGCAGGACATCCCA +
Preference number: 2 (lower is better)
Translates to: YLPQEVAHPLSLPGPHLASALHG*MGQDIP
Trigger: TGGGATGTCCTGCCCCATCCATCCGTGCAAGGCTGA...AGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCAGGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CCA 90 bp TACCTGCCGCAGGAGGTGGCCCACCCACTCAGCCTGCCTGGGCCACACCTGGCTTGGGTCTCCACATGGTaGAGGGGCTTGGGAGAACTC +
Preference number: 2 (lower is better)
Translates to: YLPQEVAHPLSLPGPHLAWVSTW*RGLGEL
Trigger: GAGTTCTCCCAAGCCCCTCCACCATGTGGAGACCCA...AGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCAGGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CCA 90 bp TACCTGCCGCAGGAGGTGGCCCACCCACTCAGCCTGCCTGGGCCACACCTGGCTTGCCCAGGGAAGTGGTaGATCTGCAGACAGCGTGAG +
Preference number: 2 (lower is better)
Translates to: YLPQEVAHPLSLPGPHLACPGKW*ICRQRE
Trigger: CTCACGCTGTCTGCAGATCCACCACTTCCCTGGGCA...AGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCAGGTA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR TCA 90 bp GATCCTGAGGTCCAGGAGGAGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTGGCTAGGGTGGCCCCGTaGTTAGGGCTGGGAGAGGGT +
Preference number: 2 (lower is better)
Translates to: DPEVQEEPQRGWHLHSALARVAP*LGLGEG
Trigger: ACCCTCTCCCAGCCCTAATCACGGGGCCACCCTAGC...CAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTCCTGGACCTCAGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR GCA 90 bp GATCCTGAGGTCCAGGAGGAGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTGCCTCGGTGGTCCCTCTaGTTGGAAGGGAGGGGCCTG +
Preference number: 2 (lower is better)
Translates to: DPEVQEEPQRGWHLHSALPRWSL*LEGRGL
Trigger: CAGGCCCCTCCCTTCCAAGCAGAGGGACCACCGAGG...CAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTCCTGGACCTCAGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR GCA 90 bp CAGCCTTGCACGGATGGATGGGGCAGGACATCCCAGGCGAGGAGGACGGTAGGACCGGAAGAGGGGGACTaGGTGAAGATTCCGAGCGGG +
Preference number: 2 (lower is better)
Translates to: QPCTDGWGRTSQARRTVGPEEGD*VKIPSG
Trigger: CCCGCTCGGAATCTTCACGCAGTCCCCCTCTTCCGG...TCCTACCGTCCTCCTCGCCTGGGATGTCCTGCCCCATCCATCCGTGCAAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CCA 90 bp GATCCTGAGGTCCAGGAGGAGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTGCCCACTGCCTCCACCTaGCCCCGACATTGGAGCAGG +
Preference number: 2 (lower is better)
Translates to: DPEVQEEPQRGWHLHSALPTAST*PRHWSR
Trigger: CCTGCTCCAATGTCGGGGCCAGGTGGAGGCAGTGGG...CAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTCCTGGACCTCAGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR GCA 90 bp TACCTGCCGCAGGAGGTGGCCCACCCACTCAGCCTGCCTGGGCCACACCTGGCTAAGCTCACTGGCAGCTaGAAGGCCTGGGGACATTTA +
Preference number: 2 (lower is better)
Translates to: YLPQEVAHPLSLPGPHLAKLTGS*KAWGHL
Trigger: TAAATGTCCCCAGGCCTTGCAGCTGCCAGTGAGCTT...AGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCAGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CCA 90 bp TCTGCCTCAGTGCCGACTGGCCCACCTGACCCGAGGAACTTGCGTGTCCCTGAATCTGAGCCCCAGGTGTaGGCCAAGAGGGCCCCAACT +
Preference number: 2 (lower is better)
Translates to: SASVPTGPPDPRNLRVPESEPQV*AKRAPT
Trigger: AGTTGGGGCCCTCTTGGCCCACACCTGGGGCTCAGA...TTCAGGGACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGCACTGAGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CCA 90 bp GATCCTGAGGTCCAGGAGGAGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTGGGGCTCAGGCTCTACTaGAGGCTGGCCCAAGGCTCA +
Preference number: 2 (lower is better)
Translates to: DPEVQEEPQRGWHLHSALGLRLY*RLAQGS
Trigger: TGAGCCTTGGGCCAGCCTCCAGTAGAGCCTGAGCCC...CAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTCCTGGACCTCAGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CCA 90 bp GATCCTGAGGTCCAGGAGGAGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTGAATTGGTGCCTGCGCTaGGGAACCCCGGAAGAGGGG +
Preference number: 2 (lower is better)
Translates to: DPEVQEEPQRGWHLHSALNWCLR*GTPEEG
Trigger: CCCCTCTTCCGGGGTTCCCCAGCGCAGGCACCAATT...CAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTCCTGGACCTCAGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR TCA 90 bp GATCCTGAGGTCCAGGAGGAGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTGCCCAAGGCAGAGGTGTaGGGCTGGCTGTCCAACACT +
Preference number: 2 (lower is better)
Translates to: DPEVQEEPQRGWHLHSALPKAEV*GWLSNT
Trigger: AGTGTTGGACAGCCAGCCTCACACCTCTGCCTTGGG...CAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTCCTGGACCTCAGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR TCA 90 bp CAGCCTTGCACGGATGGATGGGGCAGGACATCCCAGGCGAGGAGGACGGTAGGAGCTCTGTGGAAGCACTaGTACCTCCCAGCAGCTTCG +
Preference number: 2 (lower is better)
Translates to: QPCTDGWGRTSQARRTVGALWKH*YLPAAS
Trigger: CGAAGCTGCTGGGAGGTATCAGTGCTTCCACAGAGC...TCCTACCGTCCTCCTCGCCTGGGATGTCCTGCCCCATCCATCCGTGCAAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR GCA 90 bp TGGCCCAAGGCTCAGGGTCCAAGCAAAACGCAGCTTCACACCCAGGGAGGGGCTTCCAACACTGACTCATaGTGGGGCAGGGAAGCGGGG +
Preference number: 2 (lower is better)
Translates to: WPKAQGPSKTQLHTQGGASNTDS*WGREAG
Trigger: CCCCGCTTCCCTGCCCCAGCATGAGTCAGTGTTGGA...AGCCCCTCCCTGGGTGTGAAGCTGCGTTTTGCTTGGACCCTGAGCCTTGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CCA 90 bp TGGCCCAAGGCTCAGGGTCCAAGCAAAACGCAGCTTCACACCCAGGGAGGGGCTGCCAGGGACGAGACCTaGGGCTGCTTCTTCAAGGTC +
Preference number: 2 (lower is better)
Translates to: WPKAQGPSKTQLHTQGGAARDET*GCFFKV
Trigger: GACCTTGAAGAAGCAGCCCCAGGTCTCGTCCCTGGC...AGCCCCTCCCTGGGTGTGAAGCTGCGTTTTGCTTGGACCCTGAGCCTTGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CAA 90 bp GAGCCCCAGGTGTGGGCCAAGAGGGCCCCAACTGCAGGGACCAGGTaGCTGGTGGTAGAAGGGACTGTGAAGCTTCTAGGATGGTCCCTT +
Preference number: 2 (lower is better)
Translates to: EPQVWAKRAPTAGTR*LVVEGTVKLLGWSL
Trigger: AAGGGACCATCCTAGAAGCTTCACAGTCCCTTCTACCACCAGCAACCTGGTCCCTGCAGTTGGGGCCCTCTTGGCCCACACCTGGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CAA 90 bp GCCTCCTCTGCCTCAGTGCCGACTGGCCCACCTGACCCGAGGAACTaGCGTGTCCCTGAACTTAGCTCTTGGGCTGCTGACAGGTGTTTG +
Preference number: 2 (lower is better)
Translates to: ASSASVPTGPPDPRN*RVPELSSWAADRCL
Trigger: CAAACACCTGTCAGCAGCCCAAGAGCTAAGTTCAGGGACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGCACTGAGGCAGAGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR GCA 90 bp TCTGCCTCAGTGCCGACTGGCCCACCTGACCCGAGGAACTTGCGTGTCCCTGAACTTGGGGGCACGTTTTaGACCGAGTCAGCTCACCCA +
Preference number: 2 (lower is better)
Translates to: SASVPTGPPDPRNLRVPELGGTF*TESAHP
Trigger: TGGGTGAGCTGACTCGGTGCAAAACGTGCCCCCAAG...TTCAGGGACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGCACTGAGGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CCA 90 bp AGCTGTCCCCTGTCCTTCCCAAGGCAGAGGTGTGAGGCTGGCTGTCCAACACTGAGCTGGGTACACCCCTaGGCCTGGACATCAGGTGCA +
Preference number: 2 (lower is better)
Translates to: SCPLSFPRQRCEAGCPTLSWVHP*AWTSGA
Trigger: TGCACCTGATGTCCAGGCCCAGGGGTGTACCCAGCT...CAGTGTTGGACAGCCAGCCTCACACCTCTGCCTTGGGAAGGACAGGGGACAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CCA 90 bp TCTGCCTCAGTGCCGACTGGCCCACCTGACCCGAGGAACTTGCGTGTCCCTGAAAACACTGACTCATGCTaGGGCAGGGAAGCGGGGTGT +
Preference number: 2 (lower is better)
Translates to: SASVPTGPPDPRNLRVPENTDSC*GREAGC
Trigger: ACACCCCGCTTCCCTGCCCCAGCATGAGTCAGTGTT...TTCAGGGACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGCACTGAGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CCA 90 bp GATCCTGAGGTCCAGGAGGAGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTGTGGGAGCTCTGTCTCTaGAGAGGGCTCAGGCTCTAC +
Preference number: 2 (lower is better)
Translates to: DPEVQEEPQRGWHLHSALWELCL*RGLRLY
Trigger: GTAGAGCCTGAGCCCTCTCCAGAGACAGAGCTCCCA...CAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTCCTGGACCTCAGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CCA 90 bp TCCCCGAGGTACTCAAGGTGGGAGGCACTGACCCTTTACCCAGACCCCTGTGGCAAGTCAGGCAGGGCTTaGGGGCACGTTTTGCACCGA +
Preference number: 2 (lower is better)
Translates to: SPRYSRWEALTLYPDPCGKSGRA*GHVLHR
Trigger: TCGGTGCAAAACGTGCCCCCAAGCCCTGCCTGACTT...GCCACAGGGGTCTGGGTAAAGGGTCAGTGCCTCCCACCTTGAGTACCTCGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR GCA 90 bp CATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCAGCCCTTGCCTCCTCTaGCTCAGTGCCGACTGGCCC +
Preference number: 2 (lower is better)
Translates to: HALRAAGCGCLLGPGETTSPCLL*LSADWP
Trigger: GGGCCAGTCGGCACTGAGGCAGAGGAGGCAAGGGCT...GGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CCA 90 bp GATCCTGAGGTCCAGGAGGAGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTGGGCAGCTGCAAGGCCTaGGGACATTTAACGCACGTA +
Preference number: 2 (lower is better)
Translates to: DPEVQEEPQRGWHLHSALGSCKA*GHLTHV
Trigger: TACGTGCGTTAAATGTCCCCAGGCCTTGCAGCTGCC...CAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTCCTGGACCTCAGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CCA 90 bp TCTGCCTCAGTGCCGACTGGCCCACCTGACCCGAGGAACTTGCGTGTCCCTGAACTGGCAGGCGGAAGATaGATCAAATTGGTGCCTGCG +
Preference number: 2 (lower is better)
Translates to: SASVPTGPPDPRNLRVPELAGGR*IKLVPA
Trigger: CGCAGGCACCAATTTGATCCATCTTCCGCCTGCCAG...TTCAGGGACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGCACTGAGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CAA 90 bp CCCAGGCCTCAGGGACGAGTGCGTCCATGCCTTAAGGGCTGCTGGTaGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCTCAGGAAAAGC +
Preference number: 2 (lower is better)
Translates to: PRPQGRVRPCLKGCW*WVSAWSWRNYLRKS
Trigger: GCTTTTCCTGAGGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATGGACGCACTCGTCCCTGAGGCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR TCA 90 bp TACCTGCCGCAGGAGGTGGCCCACCCACTCAGCCTGCCTGGGCCACACCTGGCTATTAGCTGCTGGAAATaGCTCTACCAGTTTACTTGG +
Preference number: 2 (lower is better)
Translates to: YLPQEVAHPLSLPGPHLAISCWK*LYQFTW
Trigger: CCAAGTAAACTGGTAGAGTCATTTCCAGCAGCTAAT...AGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCAGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR GCA 90 bp TCCCCGAGGTACTCAAGGTGGGAGGCACTGACCCTTTACCCAGACCCCTGTGGCGAGACACATAGGCGGTaGCAGCTGATGAAGGTGCAT +
Preference number: 2 (lower is better)
Translates to: SPRYSRWEALTLYPDPCGETHRR*QLMKVH
Trigger: ATGCACCTTCATCAGCTGGCACCGCCTATGTGTCTC...GCCACAGGGGTCTGGGTAAAGGGTCAGTGCCTCCCACCTTGAGTACCTCGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR GCA 90 bp GATCCTGAGGTCCAGGAGGAGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTGCTGACCCGAGGAACTTaGGTGTCCCTGAACTTAGCT +
Preference number: 2 (lower is better)
Translates to: DPEVQEEPQRGWHLHSALLTRGT*VSLNLA
Trigger: AGCTAAGTTCAGGGACACGCAAGTTCCTCGGGTCAG...CAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTCCTGGACCTCAGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CCA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGGTGAAGCTTCTAGGATaGTCCCTTCATGCAAGTAGG +
Preference number: 2 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKVKLLG*SLHASR
Trigger: CCTACTTGCATGAAGGGACCATCCTAGAAGCTTCAC...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CCA 90 bp CATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCGTGATGGGCAAAGGCTaGCTGCCTCTGCCCCACCCA +
Preference number: 2 (lower is better)
Translates to: HALRAAGCGCLLGPGETTVMGKG*LPLPHP
Trigger: TGGGTGGGGCAGAGGCAGCCAGCCTTTGCCCATCAC...GGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CCA 90 bp CCATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCCTTGCACGGATGGATaGGGCAGGACATCCCAGGCG +
Preference number: 2 (lower is better)
Translates to: PCLKGCWLWVSAWSWRNYPCTDG*GRTSQA
Trigger: CGCCTGGGATGTCCTGCCCCATCCATCCGTGCAAGG...GTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR TCA 90 bp CATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCAAGAGGGGGACTGCGTaGAGATTCCGAGCGGGGAAG +
Preference number: 2 (lower is better)
Translates to: HALRAAGCGCLLGPGETTKRGTA*RFRAGK
Trigger: CTTCCCCGCTCGGAATCTTCACGCAGTCCCCCTCTT...GGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR GCA 90 bp CCATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCAAGAGGGCCCCAACTaGAGGGACCAGGTTGCTGGT +
Preference number: 2 (lower is better)
Translates to: PCLKGCWLWVSAWSWRNYQEGPN*RDQVAG
Trigger: ACCAGCAACCTGGTCCCTGCAGTTGGGGCCCTCTTG...GTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CCA 90 bp CATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCCCTGACCCCCTGGACTaGGGTTCGTCAGATGATCCC +
Preference number: 2 (lower is better)
Translates to: HALRAAGCGCLLGPGETTPDPLD*GSSDDP
Trigger: GGGATCATCTGACGAACCCCAGTCCAGGGGGTCAGG...GGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CAA 90 bp GTCATAGACAGAGAATCAGGACTGCCATGGCCATGGAAGAGTCCCTaGTTCCTGAGAGCCTCGGGGCTGCTGCTGCTACAACTCGGATGC +
Preference number: 2 (lower is better)
Translates to: VIDRESGLPWPWKSP*FLRASGLLLLQLGC
Trigger: GCATCCGAGTTGTAGCAGCAGCAGCCCCGAGGCTCTCAGGAACAAGGGACTCTTCCATGGCCATGGCAGTCCTGATTCTCTGTCTATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR GCA 90 bp CATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCGATCAAATTGGTGCCTaGGCTGGGGAACCCCGGAAG +
Preference number: 2 (lower is better)
Translates to: HALRAAGCGCLLGPGETTDQIGA*AGEPRK
Trigger: CTTCCGGGGTTCCCCAGCGCAGGCACCAATTTGATC...GGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR GCA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTATCTCCCACTGTGGGCTaGCCATCCCCGAGGTACTCA +
Preference number: 2 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLSPTVG*PSPRYS
Trigger: TGAGTACCTCGGGGATGGGCAGCCCACAGTGGGAGA...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR GCA 90 bp CCATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACATCTACACTCAGCCTTaGACGGATGGATGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: PCLKGCWLWVSAWSWRNYIYTQP*TDGWGR
Trigger: CCTGCCCCATCCATCCGTGCAAGGCTGAGTGTAGAT...GTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR GCA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTAGGCCTCAGGGACGAGTaGGTCCATGCCTTAAGGGCT +
Preference number: 2 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLGLRDE*VHALRA
Trigger: AGCCCTTAAGGCATGGACGCACTCGTCCCTGAGGCC...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CAA 90 bp GCCTGTGGCTGGGCTGGGCATGTTCCAGCCTGCTTGTGTTATAGCTaGTACCCATGTATGGCAGTTCCCAAGTTCTTGTCCCGTGTCCAA +
Preference number: 2 (lower is better)
Translates to: ACGWAGHVPACLCYS*YPCMAVPKFLSRVQ
Trigger: TTGGACACGGGACAAGAACTTGGGAACTGCCATACATGGGTACAAGCTATAACACAAGCAGGCTGGAACATGCCCAGCCCAGCCACAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CAA 90 bp TTCACCAGCTCAGCCTGTGGCTGGGCTGGGCATGTTCCAGCCTGCTaGTGTTATAGCTTGTACCCATGTATGGCAGTTCCCAAGTTCTTG +
Preference number: 2 (lower is better)
Translates to: FTSSACGWAGHVPAC*CYSLYPCMAVPKFL
Trigger: CAAGAACTTGGGAACTGCCATACATGGGTACAAGCTATAACACAAGCAGGCTGGAACATGCCCAGCCCAGCCACAGGCTGAGCTGGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CCA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTATTACCCCCAGCACACTaGATTCTCGATGAAGGGCCC +
Preference number: 2 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLLPPAH*ILDEGP
Trigger: GGGCCCTTCATCGAGAATCCAGTGTGCTGGGGGTAA...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR TCA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTAGAAGGAACTGGATGCTaGAGCTTGGCATGGGGATGT +
Preference number: 2 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLEGTGC*SLAWGC
Trigger: ACATCCCCATGCCAAGCTTCAGCATCCAGTTCCTTC...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CCA 90 bp AGCTGGACCGGCTTGGCTTTATTGATGCAGGTACACTTACTAGAGATTCTGAATGGTGGTCCCTCTGCTTaGAAGGGAGGGGCCTGTGGA +
Preference number: 2 (lower is better)
Translates to: SWTGLALLMQVHLLEILNGGPSA*KGGACG
Trigger: TCCACAGGCCCCTCCCTTCCAAGCAGAGGGACCACC...ATTCAGAATCTCTAGTAAGTGTACCTGCATCAATAAAGCCAAGCCGGTCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR GCA 90 bp CATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCTTTGTCTATCTGGACTaGCCCAACAGAATAGCAGAG +
Preference number: 2 (lower is better)
Translates to: HALRAAGCGCLLGPGETTFVYLD*PNRIAE
Trigger: CTCTGCTATTCTGTTGGGGCAGTCCAGATAGACAAA...GGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CCA 90 bp AGCTGGACCGGCTTGGCTTTATTGATGCAGGTACACTTACTAGAGATTCTGAATTGCCTTAAGGGCTGCTaGTTGTGGGTGTCTGCTTGG +
Preference number: 2 (lower is better)
Translates to: SWTGLALLMQVHLLEILNCLKGC*LWVSAW
Trigger: CCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCA...ATTCAGAATCTCTAGTAAGTGTACCTGCATCAATAAAGCCAAGCCGGTCCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CAA 90 bp GCCTCAGGAGGTCCTGACATGTGCCCAAGGTGGTCAGAGGACAGCTaGGTTTTATACATTTTAGGGAGATATGAGACATCAATCAACACA +
Preference number: 2 (lower is better)
Translates to: ASGGPDMCPRWSEDS*VLYILGRYETSINT
Trigger: TGTGTTGATTGATGTCTCATATCTCCCTAAAATGTATAAAACCAAGCTGTCCTCTGACCACCTTGGGCACATGTCAGGACCTCCTGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR TCA 90 bp CAACAGAATAGCAGAGACAGGTGGTTCATCAACAGATACTTATTTCTCACAGTTTGCTTCTTCAAGGTCTaGGCCCCAGGTGTGGGCCAA +
Preference number: 2 (lower is better)
Translates to: QQNSRDRWFINRYLFLTVCFFKV*APGVGQ
Trigger: TTGGCCCACACCTGGGGCTCAGACCTTGAAGAAGCA...AACTGTGAGAAATAAGTATCTGTTGATGAACCACCTGTCTCTGCTATTCTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CAA 90 bp TACCTGCCGCAGGAGGTGGCCCACCCACTCAGCCTGCCTGGGCCACACCTGGCTCCATGGAAGAGTCCCTaGTTCCTGAGAGCCTCGGGG +
Preference number: 3 (lower is better)
Translates to: YLPQEVAHPLSLPGPHLAPWKSP*FLRASG
Trigger: CCCCGAGGCTCTCAGGAACAAGGGACTCTTCCATGG...AGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCAGGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR GCA 72 bp GGCTCTCTGGACCAGCCCTTGCCTCCTCTGCCTCAGTaGCGACTGGCCCACCTGACCCGAGGAACTTGCGTG +
Preference number: 3 (lower is better)
Translates to: GSLDQPLPPLPQ*RLAHLTRGTCV
Trigger: CACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGCACTGAGGCAGAGGAGGCAAGGGCTGGTCCAGAGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR GCA 72 bp GCCTCCACCTGGCCCCGACATTGGAGCAGGCCCTTCTaGTGTGACCAGGCTCTCTGGACCAGCCCTTGCCTC +
Preference number: 3 (lower is better)
Translates to: ASTWPRHWSRPF*CDQALWTSPCL
Trigger: GAGGCAAGGGCTGGTCCAGAGAGCCTGGTCACAGCAGAAGGGCCTGCTCCAATGTCGGGGCCAGGTGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR GCA 72 bp AGGGATGGGATAAGGGGAACCGAGACTCACCCACTGTaGTCAGGGCAGAGGTGGTGGGCCGCGGGAACGGGC +
Preference number: 3 (lower is better)
Translates to: RDGIRGTETHPL*SGQRWWAAGTG
Trigger: GCCCGTTCCCGCGGCCCACCACCTCTGCCCTGAGCACAGTGGGTGAGTCTCGGTTCCCCTTATCCCATCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR GCA 72 bp CCCCTCCAGGCGGGACACCCAGGCCTCAGGGACGAGTaGGTCCATGCCTTAAGGGCTGCTGGTTGTGGGTGT +
Preference number: 3 (lower is better)
Translates to: PLQAGHPGLRDE*VHALRAAGCGC
Trigger: ACACCCACAACCAGCAGCCCTTAAGGCATGGACGCACTCGTCCCTGAGGCCTGGGTGTCCCGCCTGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR GCA 72 bp AGGAGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTaGACGGATGGATGGGGCAGGACATCCCAGGCGAGG +
Preference number: 3 (lower is better)
Translates to: RSLSGAGIYTQP*TDGWGRTSQAR
Trigger: CCTCGCCTGGGATGTCCTGCCCCATCCATCCGTGCAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR GCA 72 bp GGCGGGACACCCAGGCCTCAGGGACGAGTGCGTCCATaGCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGG +
Preference number: 3 (lower is better)
Translates to: GGTPRPQGRVRP*LKGCWLWVSAW
Trigger: CCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATGGACGCACTCGTCCCTGAGGCCTGGGTGTCCCGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CAA 90 bp TACCTGCCGCAGGAGGTGGCCCACCCACTCAGCCTGCCTGGGCCACACCTGGCTGGAAGATGGATCAAATaGGTGCCTGCGCTGGGGAAC +
Preference number: 3 (lower is better)
Translates to: YLPQEVAHPLSLPGPHLAGRWIK*VPALGN
Trigger: GTTCCCCAGCGCAGGCACCAATTTGATCCATCTTCC...AGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCAGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 72 bp GGGGCTGGCATCTACACTCAGCCTTGCACGGATGGATaGGGCAGGACATCCCAGGCGAGGAGGACGGTAGGA +
Preference number: 3 (lower is better)
Translates to: GAGIYTQPCTDG*GRTSQARRTVG
Trigger: TCCTACCGTCCTCCTCGCCTGGGATGTCCTGCCCCATCCATCCGTGCAAGGCTGAGTGTAGATGCCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 72 bp AGCGATCCTGAGGTCCAGGAGGAGCCTCAGCGGGGCTaGCATCTACACTCAGCCTTGCACGGATGGATGGGG +
Preference number: 3 (lower is better)
Translates to: SDPEVQEEPQRG*HLHSALHGWMG
Trigger: CCCCATCCATCCGTGCAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTCCTGGACCTCAGGATCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CAA 90 bp CAGCCTTGCACGGATGGATGGGGCAGGACATCCCAGGCGAGGAGGACGGTAGGACCTGACCCGAGGAACTaGCGTGTCCCTGAACTTAGC +
Preference number: 3 (lower is better)
Translates to: QPCTDGWGRTSQARRTVGPDPRN*RVPELS
Trigger: GCTAAGTTCAGGGACACGCAAGTTCCTCGGGTCAGG...TCCTACCGTCCTCCTCGCCTGGGATGTCCTGCCCCATCCATCCGTGCAAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR TCA 72 bp GCTGCCCATCCCCGAGGTACTCAAGGTGGGAGGCACTaGCCCTTTACCCAGACCCCTGTGGCCAGAGACACA +
Preference number: 3 (lower is better)
Translates to: AAHPRGTQGGRH*PFTQTPVARDT
Trigger: TGTGTCTCTGGCCACAGGGGTCTGGGTAAAGGGTCAGTGCCTCCCACCTTGAGTACCTCGGGGATGGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 72 bp AGGTACCTCCCCGATTTAGGGAGCTGGGTACACCCCTaGGCCTGGACATCAGGTGCAGATGCTAGGGTGGCC +
Preference number: 3 (lower is better)
Translates to: RYLPDLGSWVHP*AWTSGADARVA
Trigger: GGCCACCCTAGCATCTGCACCTGATGTCCAGGCCCAGGGGTGTACCCAGCTCCCTAAATCGGGGAGGTACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 72 bp AGAGGGCAGGGCAGGTACCTCCCCGATTTAGGGAGCTaGGTACACCCCTGGGCCTGGACATCAGGTGCAGAT +
Preference number: 3 (lower is better)
Translates to: RGQGRYLPDLGS*VHPWAWTSGAD
Trigger: ATCTGCACCTGATGTCCAGGCCCAGGGGTGTACCCAGCTCCCTAAATCGGGGAGGTACCTGCCCTGCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 72 bp GGAACCGAGACTCACCCACTGTGCTCAGGGCAGAGGTaGTGGGCCGCGGGAACGGGCATGTCTTTGTCTATC +
Preference number: 3 (lower is better)
Translates to: GTETHPLCSGQR*WAAGTGMSLSI
Trigger: GATAGACAAAGACATGCCCGTTCCCGCGGCCCACCACCTCTGCCCTGAGCACAGTGGGTGAGTCTCGGTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 72 bp CCTGGGCCACACCTGGCTGTTCACCAGCTCAGCCTGTaGCTGGGCTGGGCATGTTCCAGCCTGCTTGTGTTA +
Preference number: 3 (lower is better)
Translates to: PGPHLAVHQLSL*LGWACSSLLVL
Trigger: TAACACAAGCAGGCTGGAACATGCCCAGCCCAGCCACAGGCTGAGCTGGTGAACAGCCAGGTGTGGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR GCA 72 bp CCTCAGTGCCGACTGGCCCACCTGACCCGAGGAACTTaGGTGTCCCTGAACTTAGCTCTTGGGCTGCTGACA +
Preference number: 3 (lower is better)
Translates to: PQCRLAHLTRGT*VSLNLALGLLT
Trigger: TGTCAGCAGCCCAAGAGCTAAGTTCAGGGACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGCACTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 72 bp TGGGAGCTCTGTCTCTGGAGAGGGCTCAGGCTCTACTaGAGGCTGGCCCAAGGCTCAGGGTCCAAGCAAAAC +
Preference number: 3 (lower is better)
Translates to: WELCLWRGLRLY*RLAQGSGSKQN
Trigger: GTTTTGCTTGGACCCTGAGCCTTGGGCCAGCCTCCAGTAGAGCCTGAGCCCTCTCCAGAGACAGAGCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR TCA 72 bp CAGGACTGCCATGGCCATGGAAGAGTCCCTTGTTCCTaGGAGCCTCGGGGCTGCTGCTGCTACAACTCGGAT +
Preference number: 3 (lower is better)
Translates to: QDCHGHGRVPCS*EPRGCCCYNSD
Trigger: ATCCGAGTTGTAGCAGCAGCAGCCCCGAGGCTCTCAGGAACAAGGGACTCTTCCATGGCCATGGCAGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR GCA 72 bp AGGCCTCAGGGACGAGTGCGTCCATGCCTTAAGGGCTaGTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAAC +
Preference number: 3 (lower is better)
Translates to: RPQGRVRPCLKG*WLWVSAWSWRN
Trigger: GTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATGGACGCACTCGTCCCTGAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR GCA 72 bp AGGGGCAGAGGAGTGTGCCCACCTGAGCTGAAAGGCTaGATGGCAGGTGACCATTATCACCAGTGTCGCCAG +
Preference number: 3 (lower is better)
Translates to: RGRGVCPPELKG*MAGDHYHQCRQ
Trigger: CTGGCGACACTGGTGATAATGGTCACCTGCCATGCAGCCTTTCAGCTCAGGTGGGCACACTCCTCTGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 72 bp TCTGTCTCTGGAGAGGGCTCAGGCTCTACTGGAGGCTaGCCCAAGGCTCAGGGTCCAAGCAAAACGCAGCTT +
Preference number: 3 (lower is better)
Translates to: SVSGEGSGSTGG*PKAQGPSKTQL
Trigger: AAGCTGCGTTTTGCTTGGACCCTGAGCCTTGGGCCAGCCTCCAGTAGAGCCTGAGCCCTCTCCAGAGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 72 bp TGGCAGGCGGAAGATGGATCAAATTGGTGCCTGCGCTaGGGAACCCCGGAAGAGGGGGACTGCGTGAAGATT +
Preference number: 3 (lower is better)
Translates to: WQAEDGSNWCLR*GTPEEGDCVKI
Trigger: AATCTTCACGCAGTCCCCCTCTTCCGGGGTTCCCCAGCGCAGGCACCAATTTGATCCATCTTCCGCCTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CAA 90 bp CCATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACGAAGTCAGGCAGGGCTaGGGGGCACGTTTTGCACCG +
Preference number: 3 (lower is better)
Translates to: PCLKGCWLWVSAWSWRNYEVRQG*GARFAP
Trigger: CGGTGCAAAACGTGCCCCCAAGCCCTGCCTGACTTC...GTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CAA 90 bp TCTGCCTCAGTGCCGACTGGCCCACCTGACCCGAGGAACTTGCGTGTCCCTGAAGTGTTTGTTGAGTCCTaGAGCACACGGGTGAAGACA +
Preference number: 3 (lower is better)
Translates to: SASVPTGPPDPRNLRVPEVFVES*STRVKT
Trigger: TGTCTTCACCCGTGTGCTCAAGGACTCAACAAACAC...TTCAGGGACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGCACTGAGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR GCA 72 bp TGGAATGTCCCTGGTGTAACGTCGAGGCAGGAATCGTaGAAAGCAAGGGCCACCCTCCGTCCCAGCCTGATT +
Preference number: 3 (lower is better)
Translates to: WNVPGVTSRQES*KARATLRPSLI
Trigger: AATCAGGCTGGGACGGAGGGTGGCCCTTGCTTTGCACGATTCCTGCCTCGACGTTACACCAGGGACATTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 72 bp CCTCAGGGACGAGTGCGTCCATGCCTTAAGGGCTGCTaGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTAC +
Preference number: 3 (lower is better)
Translates to: PQGRVRPCLKGC*LWVSAWSWRNY
Trigger: GTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATGGACGCACTCGTCCCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 72 bp CCATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTaGTCCTGGAGAAACTACCTCAGGAAAAGCCAGGGC +
Preference number: 3 (lower is better)
Translates to: PCLKGCWLWVSA*SWRNYLRKSQG
Trigger: GCCCTGGCTTTTCCTGAGGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 72 bp TGGGCACTGAGTGGGAAGGAACTGGATGCTGAAGCTTaGCATGGGGATGTCTGGTTGGGCTCAGATGAAGCT +
Preference number: 3 (lower is better)
Translates to: WALSGKELDAEA*HGDVWLGSDEA
Trigger: AGCTTCATCTGAGCCCAACCAGACATCCCCATGCCAAGCTTCAGCATCCAGTTCCTTCCCACTCAGTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 72 bp GTTTCTCTCCTAGTGTGGCTGGGTCCGGGGCATTTATaGGCTCAGAATGGGGGAGTGCATGCTGATTGGCTT +
Preference number: 3 (lower is better)
Translates to: VSLLVWLGPGHL*AQNGGVHADWL
Trigger: AAGCCAATCAGCATGCACTCCCCCATTCTGAGCCCATAAATGCCCCGGACCCAGCCACACTAGGAGAGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR TCA 72 bp CTCACACTCACAGCCTCACTACTGAAACGTGGGCACTaGGTGGGAAGGAACTGGATGCTGAAGCTTGGCATG +
Preference number: 3 (lower is better)
Translates to: LTLTASLLKRGH*VGRNWMLKLGM
Trigger: CATGCCAAGCTTCAGCATCCAGTTCCTTCCCACTCAGTGCCCACGTTTCAGTAGTGAGGCTGTGAGTGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR GCA 72 bp AGCTCAGCCTGTGGCTGGGCTGGGCATGTTCCAGCCTaGTTGTGTTATAGCTTGTACCCATGTATGGCAGTT +
Preference number: 3 (lower is better)
Translates to: SSACGWAGHVPA*LCYSLYPCMAV
Trigger: AACTGCCATACATGGGTACAAGCTATAACACAAGCAGGCTGGAACATGCCCAGCCCAGCCACAGGCTGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 72 bp TGTGTGGCTCACACTCACAGCCTCACTACTGAAACGTaGGCACTGAGTGGGAAGGAACTGGATGCTGAAGCT +
Preference number: 3 (lower is better)
Translates to: CVAHTHSLTTET*ALSGKELDAEA
Trigger: AGCTTCAGCATCCAGTTCCTTCCCACTCAGTGCCCACGTTTCAGTAGTGAGGCTGTGAGTGTGAGCCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 72 bp TTGCTGGTGGTAGAAGGGACTGTGAAGCTTCTAGGATaGTCCCTTCATGCAAGTAGGAAGCTGTCCCCTGTC +
Preference number: 3 (lower is better)
Translates to: LLVVEGTVKLLG*SLHASRKLSPV
Trigger: GACAGGGGACAGCTTCCTACTTGCATGAAGGGACCATCCTAGAAGCTTCACAGTCCCTTCTACCACCAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 72 bp TGCATCTATCTCAGCGAGCGGGGGAATGACTTTGAATaGAATTGGAGGCAGGCTTGCCCTAAGCAGTTCCCA +
Preference number: 3 (lower is better)
Translates to: CIYLSERGNDFE*NWRQACPKQFP
Trigger: TGGGAACTGCTTAGGGCAAGCCTGCCTCCAATTCCATTCAAAGTCATTCCCCCGCTCGCTGAGATAGATGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR GCA 72 bp TGTCGCCAGCCAGGTCACCTCTCTGAATTTTGTGGTTaGAACCTCCATGATTCCCTAGAGCTGTTTTTACCC +
Preference number: 3 (lower is better)
Translates to: CRQPGHLSEFCG*NLHDSLELFLP
Trigger: GGGTAAAAACAGCTCTAGGGAATCATGGAGGTTGCAACCACAAAATTCAGAGAGGTGACCTGGCTGGCGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 72 bp ATAACCTTGGGGGTTAGGATCGCAACACATAAAGTTTaGGGGAATGCAGACATTCAGAGCCCAGCAAGGAGC +
Preference number: 3 (lower is better)
Translates to: ITLGVRIATHKV*GNADIQSPARS
Trigger: GCTCCTTGCTGGGCTCTGAATGTCTGCATTCCCCCAAACTTTATGTGTTGCGATCCTAACCCCCAAGGTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 72 bp GGTGGTTCATCAACAGATACTTATTTCTCACAGTTCTaGAGGCTGGAAGCCCAAGATGAAGGTGCCAGCTCG +
Preference number: 3 (lower is better)
Translates to: GGSSTDTYFSQF*RLEAQDEGASS
Trigger: CGAGCTGGCACCTTCATCTTGGGCTTCCAGCCTCCAGAACTGTGAGAAATAAGTATCTGTTGATGAACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 72 bp ATGCACAGTTTAACTCTGAGTTGTGTGACTGCTGTGTaGCTCACACTCACAGCCTCACTACTGAAACGTGGG +
Preference number: 3 (lower is better)
Translates to: MHSLTLSCVTAV*LTLTASLLKRG
Trigger: CCCACGTTTCAGTAGTGAGGCTGTGAGTGTGAGCCACACAGCAGTCACACAACTCAGAGTTAAACTGTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR TCA 72 bp CAATCGAAGTGTGAGAAGGGCAGAGAAGAATTTTATTaGGAGACGGAACAGCTCTCAGCAGAGAGGGGATGC +
Preference number: 3 (lower is better)
Translates to: QSKCEKGREEFY*ETEQLSAERGC
Trigger: GCATCCCCTCTCTGCTGAGAGCTGTTCCGTCTCTCAATAAAATTCTTCTCTGCCCTTCTCACACTTCGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR GCA 72 bp CAAGTTCTTGTCCCGTGTCCAAGAAGAATGAGGAGATaGTGCCAATCGAAGTGTGAGAAGGGCAGAGAAGAA +
Preference number: 3 (lower is better)
Translates to: QVLVPCPRRMRR*CQSKCEKGREE
Trigger: TTCTTCTCTGCCCTTCTCACACTTCGATTGGCAGCATCTCCTCATTCTTCTTGGACACGGGACAAGAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR-3UTR CAA 90 bp CAACAGAATAGCAGAGACAGGTGGTTCATCAACAGATACTTATTTCTCACAGTTACTGCAGGGACCAGGTaGCTGGTGGTAGAAGGGACT +
Preference number: 3 (lower is better)
Translates to: QQNSRDRWFINRYLFLTVTAGTR*LVVEGT
Trigger: AGTCCCTTCTACCACCAGCAACCTGGTCCCTGCAGT...AACTGTGAGAAATAAGTATCTGTTGATGAACCACCTGTCTCTGCTATTCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR GCA 72 bp GTTCTTGTCCCGTGTCCAAGAAGAATGAGGAGATGCTaGCAATCGAAGTGTGAGAAGGGCAGAGAAGAATTT +
Preference number: 3 (lower is better)
Translates to: VLVPCPRRMRRC*QSKCEKGREEF
Trigger: AAATTCTTCTCTGCCCTTCTCACACTTCGATTGGCAGCATCTCCTCATTCTTCTTGGACACGGGACAAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR GCA 72 bp TTTCTGATGAGCCTTTCCAAAGAAGGCAATCAGATATaGATCTATCTCAGCGAGCGGGGGAATGACTTTGAA +
Preference number: 3 (lower is better)
Translates to: FLMSLSKEGNQI*IYLSERGNDFE
Trigger: TTCAAAGTCATTCCCCCGCTCGCTGAGATAGATGCATATCTGATTGCCTTCTTTGGAAAGGCTCATCAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CCA 72 bp CTATCTGGACTGCCCCAACAGAATAGCAGAGACAGGTaGTTCATCAACAGATACTTATTTCTCACAGTTCTG +
Preference number: 3 (lower is better)
Translates to: LSGLPQQNSRDR*FINRYLFLTVL
Trigger: CAGAACTGTGAGAAATAAGTATCTGTTGATGAACCACCTGTCTCTGCTATTCTGTTGGGGCAGTCCAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR TCA 72 bp TTAGCTGCTGGAAATGACTCTACCAGTTTACTTGGTTaGATGAAATCTGGATTTGCTGGCGGTCTACAGTTA +
Preference number: 3 (lower is better)
Translates to: LAAGNDSTSLLG*MKSGFAGGLQL
Trigger: TAACTGTAGACCGCCAGCAAATCCAGATTTCATTCAACCAAGTAAACTGGTAGAGTCATTTCCAGCAGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR TCA 72 bp GAATTTAATGCGCTAGCTCACATTAGCTGCTGGAAATaGCTCTACCAGTTTACTTGGTTGAATGAAATCTGG +
Preference number: 3 (lower is better)
Translates to: EFNALAHISCWK*LYQFTWLNEIW
Trigger: CCAGATTTCATTCAACCAAGTAAACTGGTAGAGTCATTTCCAGCAGCTAATGTGAGCTAGCGCATTAAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TACCTGCCGCAGGAGGTGGCCCACCCACTCAGCCTGCCTGGGCCACACCTGGCTTGCTGGCCGGCACTGTaGCCAGCCTCCGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: YLPQEVAHPLSLPGPHLACWPAL*PASGCP
Trigger: GGGGCACCCGGAGGCTGGGCACAGTGCCGGCCAGCA...AGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCAGGTA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TACCTGCCGCAGGAGGTGGCCCACCCACTCAGCCTGCCTGGGCCACACCTGGCTCCAGCAGGTGCAGGATaGCGGCGGGGTGGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: YLPQEVAHPLSLPGPHLAPAGAG*RRGGPG
Trigger: GCCCGGACCACCCCGCCGCCATCCTGCACCTGCTGG...AGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCAGGTA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TACCTGCCGCAGGAGGTGGCCCACCCACTCAGCCTGCCTGGGCCACACCTGGCTCCCAGCGCCAGATGCTaGTCCCCCTCCCGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: YLPQEVAHPLSLPGPHLAPSARC*SPSRQR
Trigger: CCTCTGCCGGGAGGGGGAGCAGCATCTGGCGCTGGG...AGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCAGGTA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TACCTGCCGCAGGAGGTGGCCCACCCACTCAGCCTGCCTGGGCCACACCTGGCTGCCGCCAGGAGTCGCTaGCCACCGGTCTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: YLPQEVAHPLSLPGPHLAAARSR*PPVSCW
Trigger: CCAGCAGGAGACCGGTGGCCAGCGACTCCTGGCGGC...AGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCAGGTA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp GAGAGGGCAGGGCAGGTACCTCCCCGATTTAGGGAGCTGGGTACACCCCTGGGCCGACCCCCTCCTGCGTaGTGGGGCCGCCCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: ERAGQVPPRFRELGTPLGRPPPA*WGRPSL
Trigger: CAGAGACGGGCGGCCCCACCACGCAGGAGGGGGTCG...GCCCAGGGGTGTACCCAGCTCCCTAAATCGGGGAGGTACCTGCCCTGCCCTCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGAGTCCTGGAGGGCACTaGGCAGCGCGGGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKSPGGH*AARGGG
Trigger: CCCACCTCCCCGCGCTGCTCAGTGCCCTCCAGGACT...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp TACCTGCCGCAGGAGGTGGCCCACCCACTCAGCCTGCCTGGGCCACACCTGGCTGCTAGGGTGGCCCCGTaGTTAGGGCTGGGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: YLPQEVAHPLSLPGPHLAARVAP*LGLGEG
Trigger: ACCCTCTCCCAGCCCTAATCACGGGGCCACCCTAGC...AGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCAGGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGTCCCCCAGCGCCAGATaGTGCTCCCCCTCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKSPSAR*CSPSRQ
Trigger: CTGCCGGGAGGGGGAGCAGCATCTGGCGCTGGGGGA...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp GAGAGGGCAGGGCAGGTACCTCCCCGATTTAGGGAGCTGGGTACACCCCTGGGCGCGTGGCAGTGGCCTTaGAGCAGCTGCCGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: ERAGQVPPRFRELGTPLGAWQWP*SSCRSS
Trigger: CGAGGACCGGCAGCTGCTTCAAGGCCACTGCCACGC...GCCCAGGGGTGTACCCAGCTCCCTAAATCGGGGAGGTACCTGCCCTGCCCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp GAGAGGGCAGGGCAGGTACCTCCCCGATTTAGGGAGCTGGGTACACCCCTGGGCAGACCTGCCAGCAGGTaGAGGATGGCGGCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: ERAGQVPPRFRELGTPLGRPASR*RMAAGW
Trigger: CCACCCCGCCGCCATCCTGCACCTGCTGGCAGGTCT...GCCCAGGGGTGTACCCAGCTCCCTAAATCGGGGAGGTACCTGCCCTGCCCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp GAGAGGGCAGGGCAGGTACCTCCCCGATTTAGGGAGCTGGGTACACCCCTGGGCGCGGGCCAGCAGACCTaGCAGCAGGTGCAGGATGGC +
Preference number: 4 (lower is better)
Translates to: ERAGQVPPRFRELGTPLGAGQQT*QQVQDG
Trigger: GCCATCCTGCACCTGCTGGCAGGTCTGCTGGCCCGC...GCCCAGGGGTGTACCCAGCTCCCTAAATCGGGGAGGTACCTGCCCTGCCCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGGGCCACACCATCCGCTaGCTGCACCCCGGACAGGAC +
Preference number: 4 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKGHTIR*LHPGQD
Trigger: GTCCTGTCCGGGGTGCAGGCAGCGGATGGTGTGGCC...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGTGGCCACCGGTCTCCTaGTGGCCGGCACTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKWPPVS*WPALCP
Trigger: TGGGCACAGTGCCGGCCAGCAGGAGACCGGTGGCCA...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TCTGCCTCAGTGCCGACTGGCCCACCTGACCCGAGGAACTTGCGTGTCCCTGAAAGGTGCGCGGTCCCCTaGACGGTCCCCCGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: SASVPTGPPDPRNLRVPERCAVP*TVPRRV
Trigger: GACCCTGCGGGGGACCGTGCAGGGGACCGCGCACCT...TTCAGGGACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGCACTGAGGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp GAGAGGGCAGGGCAGGTACCTCCCCGATTTAGGGAGCTGGGTACACCCCTGGGCGCGCGTGGAGATCGCTaGAGCATCCCACGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: ERAGQVPPRFRELGTPLGARGDR*SIPRAS
Trigger: GGAGGCCCGTGGGATGCTGCAGCGATCTCCACGCGC...GCCCAGGGGTGTACCCAGCTCCCTAAATCGGGGAGGTACCTGCCCTGCCCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGAGCGCCTGCCTGGGTTaGCCTGCGTCCAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKSACLG*PASRRV
Trigger: CACCCTCCTGGACGCAGGGCAACCCAGGCAGGCGCT...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGCGCCGTCCAGGCCTCTaGGTGACGCTGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKRRPGL*VTLLLQ
Trigger: CTGGAGGAGCAGCGTCACGCAGAGGCCTGGACGGCG...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TACCTGCCGCAGGAGGTGGCCCACCCACTCAGCCTGCCTGGGCCACACCTGGCTCCGGAAGAGGGGGACTaGGTGAAGATTCCGAGCGGG +
Preference number: 4 (lower is better)
Translates to: YLPQEVAHPLSLPGPHLAPEEGD*VKIPSG
Trigger: CCCGCTCGGAATCTTCACGCAGTCCCCCTCTTCCGG...AGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCAGGTA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGCCCACCCACTCAGCCTaGCTGGGCCACACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKPTHSA*LGHTWL
Trigger: CAGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGG...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TGGCCCAAGGCTCAGGGTCCAAGCAAAACGCAGCTTCACACCCAGGGAGGGGCTGGGCCCAGGCCTGGGTaGGGCTCCTATGACCGCCCC +
Preference number: 4 (lower is better)
Translates to: WPKAQGPSKTQLHTQGGAGPRPG*GSYDRP
Trigger: GGGGCGGTCATAGGAGCCCCACCCAGGCCTGGGCCC...AGCCCCTCCCTGGGTGTGAAGCTGCGTTTTGCTTGGACCCTGAGCCTTGGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TCTGCCTCAGTGCCGACTGGCCCACCTGACCCGAGGAACTTGCGTGTCCCTGAAAGGGTGCCGGCTTCCTaGGCCGCCGCCTGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: SASVPTGPPDPRNLRVPERVPAS*AAAWAR
Trigger: CCTTGCCCAGGCGGCGGCCCAGGAAGCCGGCACCCT...TTCAGGGACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGCACTGAGGCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGTGCACCACTTCTTCGTaGCGCCCGCGGGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKCTTSS*RPRASR
Trigger: TCTGCTGGCCCGCGGGCGTCACGAAGAAGTGGTGCA...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp TACCTGCCGCAGGAGGTGGCCCACCCACTCAGCCTGCCTGGGCCACACCTGGCTAAGAGGGGGACTGCGTaGAGATTCCGAGCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: YLPQEVAHPLSLPGPHLAKRGTA*RFRAGK
Trigger: CTTCCCCGCTCGGAATCTTCACGCAGTCCCCCTCTT...AGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCAGGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp GAGAGGGCAGGGCAGGTACCTCCCCGATTTAGGGAGCTGGGTACACCCCTGGGCCACCTTGGGGTTCGCTaGCGGTGGGATGGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: ERAGQVPPRFRELGTPLGHLGVR*RWDGPR
Trigger: TCGAGGCCCATCCCACCGGCAGCGAACCCCAAGGTG...GCCCAGGGGTGTACCCAGCTCCCTAAATCGGGGAGGTACCTGCCCTGCCCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TGGCCCAAGGCTCAGGGTCCAAGCAAAACGCAGCTTCACACCCAGGGAGGGGCTAGTGTGGCCAGCTGGTaGACGCCGCAGGCGACCCCC +
Preference number: 4 (lower is better)
Translates to: WPKAQGPSKTQLHTQGGASVASW*TPQATP
Trigger: GGGGGTCGCCTGCGGCGTGCACCAGCTGGCCACACT...AGCCCCTCCCTGGGTGTGAAGCTGCGTTTTGCTTGGACCCTGAGCCTTGGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp GATCCTGAGGTCCAGGAGGAGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTGGGGACGCCTCCCCACTaGCTCCACCTGGCCCCGACA +
Preference number: 4 (lower is better)
Translates to: DPEVQEEPQRGWHLHSALGTPPH*LHLAPT
Trigger: TGTCGGGGCCAGGTGGAGGCAGTGGGGAGGCGTCCC...CAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTCCTGGACCTCAGGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CAGCCTTGCACGGATGGATGGGGCAGGACATCCCAGGCGAGGAGGACGGTAGGACCGTCCGGTCGGCGCTaGAGGCGAAGGCCTGGAGAT +
Preference number: 4 (lower is better)
Translates to: QPCTDGWGRTSQARRTVGPSGRR*RRRPGD
Trigger: ATCTCCAGGCCTTCGCCTCCAGCGCCGACCGGACGG...TCCTACCGTCCTCCTCGCCTGGGATGTCCTGCCCCATCCATCCGTGCAAGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp GATCCTGAGGTCCAGGAGGAGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTGCCACCGGTCTCCTGCTaGCCGGCACTGTGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: DPEVQEEPQRGWHLHSALPPVSC*PALCPA
Trigger: GGCTGGGCACAGTGCCGGCCAGCAGGAGACCGGTGG...CAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTCCTGGACCTCAGGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TACCTGCCGCAGGAGGTGGCCCACCCACTCAGCCTGCCTGGGCCACACCTGGCTTTCCAAAACACGTCCTaGGCCCGGCCGTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: YLPQEVAHPLSLPGPHLAFQNTS*ARPSRK
Trigger: CTTCCTGGACGGCCGGGCCCAGGACGTGTTTTGGAA...AGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCAGGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGGCCCGGACGCGCTCCTaGTCCTGGACAGAGAACACG +
Preference number: 4 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKARTRS*SWTENT
Trigger: CGTGTTCTCTGTCCAGGACCAGGAGCGCGTCCGGGC...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp GAGAGGGCAGGGCAGGTACCTCCCCGATTTAGGGAGCTGGGTACACCCCTGGGCTCCCCCAGCGCCTCCTaGAGCACATGGTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: ERAGQVPPRFRELGTPLGSPSAS*STWSRS
Trigger: GGACCTGGACCATGTGCTCCAGGAGGCGCTGGGGGA...GCCCAGGGGTGTACCCAGCTCCCTAAATCGGGGAGGTACCTGCCCTGCCCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp GAGAGGGCAGGGCAGGTACCTCCCCGATTTAGGGAGCTGGGTACACCCCTGGGCGTCCTCTGCCCGCCTTaGGAGGTCACCATCCCCCAG +
Preference number: 4 (lower is better)
Translates to: ERAGQVPPRFRELGTPLGVLCPP*EVTIPQ
Trigger: CTGGGGGATGGTGACCTCCCAAGGCGGGCAGAGGAC...GCCCAGGGGTGTACCCAGCTCCCTAAATCGGGGAGGTACCTGCCCTGCCCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TCCCCGAGGTACTCAAGGTGGGAGGCACTGACCCTTTACCCAGACCCCTGTGGCGCCAGCTTCAGGGCCTaGGCAAAGGCCCCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: SPRYSRWEALTLYPDPCGASFRA*AKAPAA
Trigger: GGCCGCAGGGGCCTTTGCCCAGGCCCTGAAGCTGGC...GCCACAGGGGTCTGGGTAAAGGGTCAGTGCCTCCCACCTTGAGTACCTCGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TACCTGCCGCAGGAGGTGGCCCACCCACTCAGCCTGCCTGGGCCACACCTGGCTAGCTGGGTACACCCCTaGGCCTGGACATCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: YLPQEVAHPLSLPGPHLASWVHP*AWTSGA
Trigger: TGCACCTGATGTCCAGGCCCAGGGGTGTACCCAGCT...AGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCAGGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGGCTGGTGGGTGCGAATaGAAGCTACCGTCCGGTCGG +
Preference number: 4 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKAGGCE*KLPSGR
Trigger: CCGACCGGACGGTAGCTTTCATTCGCACCCACCAGC...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGCAGGCCCTTCTGCTGTaGCCAGGCTCTCTGGACCAG +
Preference number: 4 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKQALLL*PGSLDQ
Trigger: CTGGTCCAGAGAGCCTGGTCACAGCAGAAGGGCCTG...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp TCTGCCTCAGTGCCGACTGGCCCACCTGACCCGAGGAACTTGCGTGTCCCTGAACCTCCAGCTGAGCACTaGGGAAGACGCAGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: SASVPTGPPDPRNLRVPEPPAEH*GRRRPG
Trigger: CCCCGGCCTGCGTCTTCCTCAGTGCTCAGCTGGAGG...TTCAGGGACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGCACTGAGGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TACCTGCCGCAGGAGGTGGCCCACCCACTCAGCCTGCCTGGGCCACACCTGGCTCAGAGTACACTCGTCTaGAGCTTGGAGGCTGAGCCG +
Preference number: 4 (lower is better)
Translates to: YLPQEVAHPLSLPGPHLAQSTLV*SLEAEP
Trigger: CGGCTCAGCCTCCAAGCTGCAGACGAGTGTACTCTG...AGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCAGGTA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp GAGAGGGCAGGGCAGGTACCTCCCCGATTTAGGGAGCTGGGTACACCCCTGGGCGAGGGCCCGGCTGCATaGTGCCAGGCAGTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: ERAGQVPPRFRELGTPLGEGPAA*CQAVLK
Trigger: TTTGAGGACTGCCTGGCAGCATGCAGCCGGGCCCTC...GCCCAGGGGTGTACCCAGCTCCCTAAATCGGGGAGGTACCTGCCCTGCCCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp GATCCTGAGGTCCAGGAGGAGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTGCAGAGCCAGGAGAGGTaGGCGGTCCCCTGCACGGTC +
Preference number: 4 (lower is better)
Translates to: DPEVQEEPQRGWHLHSALQSQER*AVPCTV
Trigger: GACCGTGCAGGGGACCGCGCACCTCTCCTGGCTCTG...CAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTCCTGGACCTCAGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp GATCCTGAGGTCCAGGAGGAGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTGCGCGGAGAAGGAACATaGGTGCAGTGGGGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: DPEVQEEPQRGWHLHSALRGEGT*VQWGPG
Trigger: GCCGGGCCCCCACTGCACGCATGTTCCTTCTCCGCG...CAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTCCTGGACCTCAGGATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp GAGAGGGCAGGGCAGGTACCTCCCCGATTTAGGGAGCTGGGTACACCCCTGGGCGGCCTCTCTTGGCCATaGTACCTGCCGCAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: ERAGQVPPRFRELGTPLGGLSWP*YLPQEV
Trigger: CACCTCCTGCGGCAGGTAGCATGGCCAAGAGAGGCC...GCCCAGGGGTGTACCCAGCTCCCTAAATCGGGGAGGTACCTGCCCTGCCCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TCTGCCTCAGTGCCGACTGGCCCACCTGACCCGAGGAACTTGCGTGTCCCTGAAGCTCGGCGCTCACCTTaGGGTTCGCTGCCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: SASVPTGPPDPRNLRVPEARRSP*GSLPVG
Trigger: TCCCACCGGCAGCGAACCCCAAGGTGAGCGCCGAGC...TTCAGGGACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGCACTGAGGCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp GATCCTGAGGTCCAGGAGGAGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTGTCTGGAAGTCCTCCATaGCGCGCCGCGAGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: DPEVQEEPQRGWHLHSALSGSPP*RAASPR
Trigger: CCGGGGACTCGCGGCGCGCCATGGAGGACTTCCAGA...CAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTCCTGGACCTCAGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CAGCCTTGCACGGATGGATGGGGCAGGACATCCCAGGCGAGGAGGACGGTAGGAACGTCCAGGGTGGGCTaGAGGCAGGCGGTGTCACCA +
Preference number: 4 (lower is better)
Translates to: QPCTDGWGRTSQARRTVGTSRVG*RQAVSP
Trigger: TGGTGACACCGCCTGCCTCCAGCCCACCCTGGACGT...TCCTACCGTCCTCCTCGCCTGGGATGTCCTGCCCCATCCATCCGTGCAAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TACCTGCCGCAGGAGGTGGCCCACCCACTCAGCCTGCCTGGGCCACACCTGGCTGTACACCCCTGGGCCTaGACATCAGGTGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: YLPQEVAHPLSLPGPHLAVHPWA*TSGADA
Trigger: AGCATCTGCACCTGATGTCCAGGCCCAGGGGTGTAC...AGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCAGGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp GAGAGGGCAGGGCAGGTACCTCCCCGATTTAGGGAGCTGGGTACACCCCTGGGCGGCTCTACTGGAGGCTaGCCCAAGGCTCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: ERAGQVPPRFRELGTPLGGSTGG*PKAQGP
Trigger: TGGACCCTGAGCCTTGGGCCAGCCTCCAGTAGAGCC...GCCCAGGGGTGTACCCAGCTCCCTAAATCGGGGAGGTACCTGCCCTGCCCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGGTGATGGGCAAAGGCTaGCTGCCTCTGCCCCACCCA +
Preference number: 4 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKVMGKG*LPLPHP
Trigger: TGGGTGGGGCAGAGGCAGCCAGCCTTTGCCCATCAC...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TGGCCCAAGGCTCAGGGTCCAAGCAAAACGCAGCTTCACACCCAGGGAGGGGCTGGCCCTCTCCCACTGTaGGCTGCCCATCCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: WPKAQGPSKTQLHTQGGAGPLPL*AAHPRG
Trigger: ACCTCGGGGATGGGCAGCCCACAGTGGGAGAGGGCC...AGCCCCTCCCTGGGTGTGAAGCTGCGTTTTGCTTGGACCCTGAGCCTTGGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp GATCCTGAGGTCCAGGAGGAGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTGACCTGCCGCAGGAGGTaGCCCACCCACTCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: DPEVQEEPQRGWHLHSALTCRRR*PTHSAC
Trigger: GCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCAGGT...CAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTCCTGGACCTCAGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp CAGCCTTGCACGGATGGATGGGGCAGGACATCCCAGGCGAGGAGGACGGTAGGACACGAGCTCCTGGGCTaGCATCATGTCTGGGACCCC +
Preference number: 4 (lower is better)
Translates to: QPCTDGWGRTSQARRTVGHELLG*HHVWDP
Trigger: GGGGTCCCAGACATGATGTCAGCCCAGGAGCTCGTG...TCCTACCGTCCTCCTCGCCTGGGATGTCCTGCCCCATCCATCCGTGCAAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp TCCCCGAGGTACTCAAGGTGGGAGGCACTGACCCTTTACCCAGACCCCTGTGGCGCACGTCTCCCTTCTTaGGCTGGAGCAGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SPRYSRWEALTLYPDPCGARLPS*AGAGPA
Trigger: GGCTGGGCCTGCTCCAGCTCAAGAAGGGAGACGTGC...GCCACAGGGGTCTGGGTAAAGGGTCAGTGCCTCCCACCTTGAGTACCTCGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp TCCCCGAGGTACTCAAGGTGGGAGGCACTGACCCTTTACCCAGACCCCTGTGGCAGCAGCAGGCGACCCTaGCGGCAGAAGTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: SPRYSRWEALTLYPDPCGSSRRP*RQKSSA
Trigger: GGCAGAGGACTTCTGCCGTCAGGGTCGCCTGCTGCT...GCCACAGGGGTCTGGGTAAAGGGTCAGTGCCTCCCACCTTGAGTACCTCGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp TCTGCCTCAGTGCCGACTGGCCCACCTGACCCGAGGAACTTGCGTGTCCCTGAAGCCGACTGGCCCACCTaGCCCGAGGAACTTGCGTGT +
Preference number: 4 (lower is better)
Translates to: SASVPTGPPDPRNLRVPEADWPT*PEELAC
Trigger: ACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGC...TTCAGGGACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGCACTGAGGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TCCCCGAGGTACTCAAGGTGGGAGGCACTGACCCTTTACCCAGACCCCTGTGGCGGGAGACCACTGCCATaGCGTCCCAGTGGATGGCGG +
Preference number: 4 (lower is better)
Translates to: SPRYSRWEALTLYPDPCGGRPLP*RPSGWR
Trigger: CCGCCATCCACTGGGACGGCATGGCAGTGGTCTCCC...GCCACAGGGGTCTGGGTAAAGGGTCAGTGCCTCCCACCTTGAGTACCTCGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TCTGCCTCAGTGCCGACTGGCCCACCTGACCCGAGGAACTTGCGTGTCCCTGAAACACCATCCGCTGCCTaGACCCCGGACAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: SASVPTGPPDPRNLRVPETPSAA*TPDRTQ
Trigger: CTGGGTCCTGTCCGGGGTGCAGGCAGCGGATGGTGT...TTCAGGGACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGCACTGAGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TCTGCCTCAGTGCCGACTGGCCCACCTGACCCGAGGAACTTGCGTGTCCCTGAAAAGCCCCTCCTCAGCTaGAGCAGGGCCAGTCGTGCC +
Preference number: 4 (lower is better)
Translates to: SASVPTGPPDPRNLRVPEKPLLS*SRASRA
Trigger: GGCACGACTGGCCCTGCTGCAGCTGAGGAGGGGCTT...TTCAGGGACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGCACTGAGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TACCTGCCGCAGGAGGTGGCCCACCCACTCAGCCTGCCTGGGCCACACCTGGCTAAGGAGGGACTCACTTaGCTGGCTTCCTGCGGCAAA +
Preference number: 4 (lower is better)
Translates to: YLPQEVAHPLSLPGPHLAKEGLT*LASCGK
Trigger: TTTGCCGCAGGAAGCCAGGCAAGTGAGTCCCTCCTT...AGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCAGGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TCTGCCTCAGTGCCGACTGGCCCACCTGACCCGAGGAACTTGCGTGTCCCTGAACGTCCACACAGTGCCTaGACGTTCCCCGGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SASVPTGPPDPRNLRVPERPHSA*TFPGSA
Trigger: GGCTGAGCCGGGGAACGTGCAGGCACTGTGTGGACG...TTCAGGGACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGCACTGAGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TACCTGCCGCAGGAGGTGGCCCACCCACTCAGCCTGCCTGGGCCACACCTGGCTCTTTTTCCAGGTGGGTaGCAGCTTCCTCGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: YLPQEVAHPLSLPGPHLALFPGG*QLPRSC
Trigger: GCAGCTACGAGGAAGCTGGCACCCACCTGGAAAAAG...AGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCAGGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TCCCCGAGGTACTCAAGGTGGGAGGCACTGACCCTTTACCCAGACCCCTGTGGCCCTCGGTGGTCCCTCTaGTTGGAAGGGAGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: SPRYSRWEALTLYPDPCGPRWSL*LEGRGL
Trigger: CAGGCCCCTCCCTTCCAAGCAGAGGGACCACCGAGG...GCCACAGGGGTCTGGGTAAAGGGTCAGTGCCTCCCACCTTGAGTACCTCGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TCCCCGAGGTACTCAAGGTGGGAGGCACTGACCCTTTACCCAGACCCCTGTGGCAATAGGGCCCCTCCCTaGCTGACCCCCTGGACTGGG +
Preference number: 4 (lower is better)
Translates to: SPRYSRWEALTLYPDPCGNRAPP*LTPWTG
Trigger: CCCAGTCCAGGGGGTCAGGCAGGGAGGGGCCCTATT...GCCACAGGGGTCTGGGTAAAGGGTCAGTGCCTCCCACCTTGAGTACCTCGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp GATCCTGAGGTCCAGGAGGAGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTGGGGGCCCCACTTCCATaGAGGGCGAGGAATAGGGCC +
Preference number: 4 (lower is better)
Translates to: DPEVQEEPQRGWHLHSALGAPLP*RARNRA
Trigger: GGCCCTATTCCTCGCCCTGCATGGAAGTGGGGCCCC...CAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTCCTGGACCTCAGGATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TCCCCGAGGTACTCAAGGTGGGAGGCACTGACCCTTTACCCAGACCCCTGTGGCACAGAGGGATGTGGCTaGCTGGAGGGCCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SPRYSRWEALTLYPDPCGTEGCG*LEGPGL
Trigger: CAGGCCTGGGCCCTCCAGCCAGCCACATCCCTCTGT...GCCACAGGGGTCTGGGTAAAGGGTCAGTGCCTCCCACCTTGAGTACCTCGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TCTGCCTCAGTGCCGACTGGCCCACCTGACCCGAGGAACTTGCGTGTCCCTGAAGCCATGCCGTCCCAGTaGATGGCGGGGATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SASVPTGPPDPRNLRVPEAMPSQ*MAGIWL
Trigger: CAGCCAGATCCCCGCCATCCACTGGGACGGCATGGC...TTCAGGGACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGCACTGAGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CAGCCTTGCACGGATGGATGGGGCAGGACATCCCAGGCGAGGAGGACGGTAGGAAGAAGACGTCCAGGGTaGGCTGGAGGCAGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: QPCTDGWGRTSQARRTVGRRRPG*AGGRRC
Trigger: ACACCGCCTGCCTCCAGCCCACCCTGGACGTCTTCT...TCCTACCGTCCTCCTCGCCTGGGATGTCCTGCCCCATCCATCCGTGCAAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TGGCCCAAGGCTCAGGGTCCAAGCAAAACGCAGCTTCACACCCAGGGAGGGGCTAGGGGCCCCAGTGTCTaGCAGCTGGCTCAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: WPKAQGPSKTQLHTQGGARGPSV*QLAQKG
Trigger: GCCCTTCTGAGCCAGCTGCCAGACACTGGGGCCCCT...AGCCCCTCCCTGGGTGTGAAGCTGCGTTTTGCTTGGACCCTGAGCCTTGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGGCCAGGGACGAGACCTaGGGCTGCTTCTTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKARDET*GCFFKV
Trigger: GACCTTGAAGAAGCAGCCCCAGGTCTCGTCCCTGGC...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGGGGTGGATGGGGAGCTaGCAGGCGGAAGATGGATCA +
Preference number: 4 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKGWMGS*QAEDGS
Trigger: TGATCCATCTTCCGCCTGCCAGCTCCCCATCCACCC...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TGGCCCAAGGCTCAGGGTCCAAGCAAAACGCAGCTTCACACCCAGGGAGGGGCTGAGCAGGGAACGTGGTaGGGAAGGGCACCCCTAGGG +
Preference number: 4 (lower is better)
Translates to: WPKAQGPSKTQLHTQGGAEQGTW*GRAPLG
Trigger: CCCTAGGGGTGCCCTTCCCCACCACGTTCCCTGCTC...AGCCCCTCCCTGGGTGTGAAGCTGCGTTTTGCTTGGACCCTGAGCCTTGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp GAGAGGGCAGGGCAGGTACCTCCCCGATTTAGGGAGCTGGGTACACCCCTGGGCGAGCCTCAGCGGGGCTaGCATCTACACTCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: ERAGQVPPRFRELGTPLGEPQRG*HLHSAL
Trigger: CAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTC...GCCCAGGGGTGTACCCAGCTCCCTAAATCGGGGAGGTACCTGCCCTGCCCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp TGGCCCAAGGCTCAGGGTCCAAGCAAAACGCAGCTTCACACCCAGGGAGGGGCTGATGCAGCAGGCAGCTaGGATCCGGGGCATCCACCT +
Preference number: 4 (lower is better)
Translates to: WPKAQGPSKTQLHTQGGADAAGS*DPGHPP
Trigger: AGGTGGATGCCCCGGATCTCAGCTGCCTGCTGCATC...AGCCCCTCCCTGGGTGTGAAGCTGCGTTTTGCTTGGACCCTGAGCCTTGGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp GAGAGGGCAGGGCAGGTACCTCCCCGATTTAGGGAGCTGGGTACACCCCTGGGCTGCTTCTTCAAGGTCTaGGCCCCAGGTGTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: ERAGQVPPRFRELGTPLGCFFKV*APGVGQ
Trigger: TTGGCCCACACCTGGGGCTCAGACCTTGAAGAAGCA...GCCCAGGGGTGTACCCAGCTCCCTAAATCGGGGAGGTACCTGCCCTGCCCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGGCTCTGTGGAAGCACTaGTACCTCCCAGCAGCTTCG +
Preference number: 4 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKALWKH*YLPAAS
Trigger: CGAAGCTGCTGGGAGGTATCAGTGCTTCCACAGAGC...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp TCCCCGAGGTACTCAAGGTGGGAGGCACTGACCCTTTACCCAGACCCCTGTGGCGAGATACCTGCTGGGTaGGCTGGTGGTAGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SPRYSRWEALTLYPDPCGEIPAG*AGGRGG
Trigger: GCCCCCTCTACCACCAGCTCACCCAGCAGGTATCTC...GCCACAGGGGTCTGGGTAAAGGGTCAGTGCCTCCCACCTTGAGTACCTCGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp CAGCCTTGCACGGATGGATGGGGCAGGACATCCCAGGCGAGGAGGACGGTAGGAGATCTGCAGACAGCGTaGGCTCCTGGAGCGTCAGGA +
Preference number: 4 (lower is better)
Translates to: QPCTDGWGRTSQARRTVGDLQTA*APGASG
Trigger: TCCTGACGCTCCAGGAGCTCACGCTGTCTGCAGATC...TCCTACCGTCCTCCTCGCCTGGGATGTCCTGCCCCATCCATCCGTGCAAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TCTGCCTCAGTGCCGACTGGCCCACCTGACCCGAGGAACTTGCGTGTCCCTGAATGGTCTAGGGCCAGGTaGACCAACGCCCGTCCACAC +
Preference number: 4 (lower is better)
Translates to: SASVPTGPPDPRNLRVPEWSRAR*TNARPH
Trigger: GTGTGGACGGGCGTTGGTGCACCTGGCCCTAGACCA...TTCAGGGACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGCACTGAGGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TCTGCCTCAGTGCCGACTGGCCCACCTGACCCGAGGAACTTGCGTGTCCCTGAAACGGCAGAAGTCCTCTaGCCGCCTTGGGAGGTCACC +
Preference number: 4 (lower is better)
Translates to: SASVPTGPPDPRNLRVPETAEVL*PPWEVT
Trigger: GGTGACCTCCCAAGGCGGGCAGAGGACTTCTGCCGT...TTCAGGGACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGCACTGAGGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp AGCTGTCCCCTGTCCTTCCCAAGGCAGAGGTGTGAGGCTGGCTGTCCAACACTGCCTCCTCTGCCTCAGTaGCGACTGGCCCACCTGACC +
Preference number: 4 (lower is better)
Translates to: SCPLSFPRQRCEAGCPTLPPLPQ*RLAHLT
Trigger: GGTCAGGTGGGCCAGTCGGCACTGAGGCAGAGGAGG...CAGTGTTGGACAGCCAGCCTCACACCTCTGCCTTGGGAAGGACAGGGGACAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp CAGCCTTGCACGGATGGATGGGGCAGGACATCCCAGGCGAGGAGGACGGTAGGAGAGACTCACCCACTGTaGTCAGGGCAGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: QPCTDGWGRTSQARRTVGETHPL*SGQRWW
Trigger: CCACCACCTCTGCCCTGAGCACAGTGGGTGAGTCTC...TCCTACCGTCCTCCTCGCCTGGGATGTCCTGCCCCATCCATCCGTGCAAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp AGCTGTCCCCTGTCCTTCCCAAGGCAGAGGTGTGAGGCTGGCTGTCCAACACTGGAGCCGGCTGTGCCCTaGGGACCCAGATTCCCTCGT +
Preference number: 4 (lower is better)
Translates to: SCPLSFPRQRCEAGCPTLEPAVP*GPRFPR
Trigger: ACGAGGGAATCTGGGTCCCCAGGGCACAGCCGGCTC...CAGTGTTGGACAGCCAGCCTCACACCTCTGCCTTGGGAAGGACAGGGGACAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp AGCTGTCCCCTGTCCTTCCCAAGGCAGAGGTGTGAGGCTGGCTGTCCAACACTGTGCCGTCCCAGTGGATaGCGGGGATCTGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: SCPLSFPRQRCEAGCPTLCRPSG*RGSGCP
Trigger: GGGACAGCCAGATCCCCGCCATCCACTGGGACGGCA...CAGTGTTGGACAGCCAGCCTCACACCTCTGCCTTGGGAAGGACAGGGGACAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp GATCCTGAGGTCCAGGAGGAGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTGGGGAGGTGGGGCCGCTaGTGGGTGCGAATGAAAGCT +
Preference number: 4 (lower is better)
Translates to: DPEVQEEPQRGWHLHSALGRWGR*WVRMKA
Trigger: AGCTTTCATTCGCACCCACCAGCGGCCCCACCTCCC...CAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTCCTGGACCTCAGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TCTGCCTCAGTGCCGACTGGCCCACCTGACCCGAGGAACTTGCGTGTCCCTGAAACAGAGAACACGGCCTaGAACTGCCTCCGCGCCCCA +
Preference number: 4 (lower is better)
Translates to: SASVPTGPPDPRNLRVPETENTA*NCLRAP
Trigger: TGGGGCGCGGAGGCAGTTCCAGGCCGTGTTCTCTGT...TTCAGGGACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGCACTGAGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TCCCCGAGGTACTCAAGGTGGGAGGCACTGACCCTTTACCCAGACCCCTGTGGCAGCTGCCGGTCCTCGTaGCAGAAGACGTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SPRYSRWEALTLYPDPCGSCRSS*QKTSRV
Trigger: CACCCTGGACGTCTTCTGCCACGAGGACCGGCAGCT...GCCACAGGGGTCTGGGTAAAGGGTCAGTGCCTCCCACCTTGAGTACCTCGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TGGCCCAAGGCTCAGGGTCCAAGCAAAACGCAGCTTCACACCCAGGGAGGGGCTAGGCGATGGCCTCCTTaGTGTGAACCCTGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: WPKAQGPSKTQLHTQGGARRWPP*CEPCRR
Trigger: CCGACGGCAGGGTTCACACCAAGGAGGCCATCGCCT...AGCCCCTCCCTGGGTGTGAAGCTGCGTTTTGCTTGGACCCTGAGCCTTGGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCTCCTGGGCCGCCGCCTaGGCAAGGCTCTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: HALRAAGCGCLLGPGETTSWAAA*ARLCRS
Trigger: GGAGCGGCAGAGCCTTGCCCAGGCGGCGGCCCAGGA...GGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TGGCCCAAGGCTCAGGGTCCAAGCAAAACGCAGCTTCACACCCAGGGAGGGGCTCCCGATTTAGGGAGCTaGGTACACCCCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: WPKAQGPSKTQLHTQGGAPDLGS*VHPWAW
Trigger: CCAGGCCCAGGGGTGTACCCAGCTCCCTAAATCGGG...AGCCCCTCCCTGGGTGTGAAGCTGCGTTTTGCTTGGACCCTGAGCCTTGGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TGGCCCAAGGCTCAGGGTCCAAGCAAAACGCAGCTTCACACCCAGGGAGGGGCTGGGCTCAGGCTCTACTaGAGGCTGGCCCAAGGCTCA +
Preference number: 4 (lower is better)
Translates to: WPKAQGPSKTQLHTQGGAGLRLY*RLAQGS
Trigger: TGAGCCTTGGGCCAGCCTCCAGTAGAGCCTGAGCCC...AGCCCCTCCCTGGGTGTGAAGCTGCGTTTTGCTTGGACCCTGAGCCTTGGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGTGGGAGCTCTGTCTCTaGAGAGGGCTCAGGCTCTAC +
Preference number: 4 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKWELCL*RGLRLY
Trigger: GTAGAGCCTGAGCCCTCTCCAGAGACAGAGCTCCCA...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TCTGCCTCAGTGCCGACTGGCCCACCTGACCCGAGGAACTTGCGTGTCCCTGAAAGTCCCCAAGCTCACTaGCAGCTGCAAGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SASVPTGPPDPRNLRVPESPQAH*QLQGLG
Trigger: CCCCAGGCCTTGCAGCTGCCAGTGAGCTTGGGGACT...TTCAGGGACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGCACTGAGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGAAGTCAGGCAGGGCTTaGGGGCACGTTTTGCACCGA +
Preference number: 4 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKKSGRA*GHVLHR
Trigger: TCGGTGCAAAACGTGCCCCCAAGCCCTGCCTGACTT...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp GAGAGGGCAGGGCAGGTACCTCCCCGATTTAGGGAGCTGGGTACACCCCTGGGCTTACCCAGACCCCTGTaGCCAGAGACACATAGGCGG +
Preference number: 4 (lower is better)
Translates to: ERAGQVPPRFRELGTPLGLPRPL*PETHRR
Trigger: CCGCCTATGTGTCTCTGGCCACAGGGGTCTGGGTAA...GCCCAGGGGTGTACCCAGCTCCCTAAATCGGGGAGGTACCTGCCCTGCCCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp GAGAGGGCAGGGCAGGTACCTCCCCGATTTAGGGAGCTGGGTACACCCCTGGGCTGGGTCTCCACATGGTaGAGGGGCTTGGGAGAACTC +
Preference number: 4 (lower is better)
Translates to: ERAGQVPPRFRELGTPLGWVSTW*RGLGEL
Trigger: GAGTTCTCCCAAGCCCCTCCACCATGTGGAGACCCA...GCCCAGGGGTGTACCCAGCTCCCTAAATCGGGGAGGTACCTGCCCTGCCCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp TCCCCGAGGTACTCAAGGTGGGAGGCACTGACCCTTTACCCAGACCCCTGTGGCGCCCTGAGTCGATTTTaGTCAGCGCCTCCCCCACAG +
Preference number: 4 (lower is better)
Translates to: SPRYSRWEALTLYPDPCGALSRF*SAPPPQ
Trigger: CTGTGGGGGAGGCGCTGATCAAAATCGACTCAGGGC...GCCACAGGGGTCTGGGTAAAGGGTCAGTGCCTCCCACCTTGAGTACCTCGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp TCTGCCTCAGTGCCGACTGGCCCACCTGACCCGAGGAACTTGCGTGTCCCTGAACCCAAGGCAGAGGTGTaGGGCTGGCTGTCCAACACT +
Preference number: 4 (lower is better)
Translates to: SASVPTGPPDPRNLRVPEPKAEV*GWLSNT
Trigger: AGTGTTGGACAGCCAGCCTCACACCTCTGCCTTGGG...TTCAGGGACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGCACTGAGGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp AGCTGTCCCCTGTCCTTCCCAAGGCAGAGGTGTGAGGCTGGCTGTCCAACACTGAGGCACCAGCAGAATTaGGGGCCTCGGGAACCCACG +
Preference number: 4 (lower is better)
Translates to: SCPLSFPRQRCEAGCPTLRHQQN*GPREPT
Trigger: CGTGGGTTCCCGAGGCCCTCAATTCTGCTGGTGCCT...CAGTGTTGGACAGCCAGCCTCACACCTCTGCCTTGGGAAGGACAGGGGACAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp CAGCCTTGCACGGATGGATGGGGCAGGACATCCCAGGCGAGGAGGACGGTAGGAAGTCCAGCAGGGCGCTaGAGCGTTGCACCACTTCTT +
Preference number: 4 (lower is better)
Translates to: QPCTDGWGRTSQARRTVGSPAGR*SVAPLL
Trigger: AAGAAGTGGTGCAACGCTGCAGCGCCCTGCTGGACT...TCCTACCGTCCTCCTCGCCTGGGATGTCCTGCCCCATCCATCCGTGCAAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp CAGCCTTGCACGGATGGATGGGGCAGGACATCCCAGGCGAGGAGGACGGTAGGATCGCGGAAGGCCTCCTaGAGGTTCCAAAACACGTCC +
Preference number: 4 (lower is better)
Translates to: QPCTDGWGRTSQARRTVGSRKAS*RFQNTS
Trigger: GGACGTGTTTTGGAACCTGCAGGAGGCCTTCCGCGA...TCCTACCGTCCTCCTCGCCTGGGATGTCCTGCCCCATCCATCCGTGCAAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp CCATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCCTTGGTGTGAACCCTaGCGTCGGCCCCGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PCLKGCWLWVSAWSWRNYPWCEP*RRPRLA
Trigger: GGCCAGGCGGGGCCGACGGCAGGGTTCACACCAAGG...GTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp CATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCCTGCCTGGGTTGCCCTaGGTCCAGGAGGGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: HALRAAGCGCLLGPGETTLPGLP*VQEGAG
Trigger: GCCGGCACCCTCCTGGACGCAGGGCAACCCAGGCAG...GGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp CATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCACCCAGCCCTGCACCTaGCGCCTGGGGGCCCCACTT +
Preference number: 4 (lower is better)
Translates to: HALRAAGCGCLLGPGETTTQPCT*RLGAPL
Trigger: AAGTGGGGCCCCCAGGCGGCAGGTGCAGGGCTGGGT...GGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp GATCCTGAGGTCCAGGAGGAGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTGAGGTGGGGCCGCTGGTaGGTGCGAATGAAAGCTACC +
Preference number: 4 (lower is better)
Translates to: DPEVQEEPQRGWHLHSALRWGRW*VRMKAT
Trigger: GGTAGCTTTCATTCGCACCCACCAGCGGCCCCACCT...CAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTCCTGGACCTCAGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TCTGCCTCAGTGCCGACTGGCCCACCTGACCCGAGGAACTTGCGTGTCCCTGAATGCTCCACTACCGTCTaGAAGTCCTCCATGGCGCGC +
Preference number: 4 (lower is better)
Translates to: SASVPTGPPDPRNLRVPECSTTV*KSSMAR
Trigger: GCGCGCCATGGAGGACTTCCAGACGGTAGTGGAGCA...TTCAGGGACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGCACTGAGGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCAGCACAGGGGCTGCCTaGGGCCTCCGGGATAGGGCC +
Preference number: 4 (lower is better)
Translates to: HALRAAGCGCLLGPGETTSTGAA*GLRDRA
Trigger: GGCCCTATCCCGGAGGCCCCAGGCAGCCCCTGTGCT...GGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CAGCCTTGCACGGATGGATGGGGCAGGACATCCCAGGCGAGGAGGACGGTAGGATGTGTGATGAGGGCCTaGGCTTCCGGCTTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: QPCTDGWGRTSQARRTVGCVMRA*ASGFRE
Trigger: CTCTCTGAAGCCGGAAGCCCAGGCCCTCATCACACA...TCCTACCGTCCTCCTCGCCTGGGATGTCCTGCCCCATCCATCCGTGCAAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp AGCTGTCCCCTGTCCTTCCCAAGGCAGAGGTGTGAGGCTGGCTGTCCAACACTGGCCTCCTGGAGCACATaGTCCAGGTCCCTAAGGGCC +
Preference number: 4 (lower is better)
Translates to: SCPLSFPRQRCEAGCPTLASWST*SRSLRA
Trigger: GGCCCTTAGGGACCTGGACCATGTGCTCCAGGAGGC...CAGTGTTGGACAGCCAGCCTCACACCTCTGCCTTGGGAAGGACAGGGGACAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CAGCCTTGCACGGATGGATGGGGCAGGACATCCCAGGCGAGGAGGACGGTAGGAAACACTGACTCATGCTaGGGCAGGGAAGCGGGGTGT +
Preference number: 4 (lower is better)
Translates to: QPCTDGWGRTSQARRTVGNTDSC*GREAGC
Trigger: ACACCCCGCTTCCCTGCCCCAGCATGAGTCAGTGTT...TCCTACCGTCCTCCTCGCCTGGGATGTCCTGCCCCATCCATCCGTGCAAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CAA 72 bp GCCTCAGTGCCGACTGGCCCACCTGACCCGAGGAACTaGCGTGTCCCTGAACTTAGCTCTTGGGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: ASVPTGPPDPRN*RVPELSSWAAD
Trigger: GTCAGCAGCCCAAGAGCTAAGTTCAGGGACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGCACTGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp AGCTGTCCCCTGTCCTTCCCAAGGCAGAGGTGTGAGGCTGGCTGTCCAACACTGGAGCAGAGCTTCAGGTaGCAGGGTGTCACTCCGGGT +
Preference number: 4 (lower is better)
Translates to: SCPLSFPRQRCEAGCPTLEQSFR*QGVTPG
Trigger: ACCCGGAGTGACACCCTGTCACCTGAAGCTCTGCTC...CAGTGTTGGACAGCCAGCCTCACACCTCTGCCTTGGGAAGGACAGGGGACAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTAGGCCCGGGCTGCCTCTaGCGTTGGGGCACGGTGCAG +
Preference number: 4 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLGPGCL*RWGTVQ
Trigger: CTGCACCGTGCCCCAACGTCAGAGGCAGCCCGGGCC...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp AGCTGTCCCCTGTCCTTCCCAAGGCAGAGGTGTGAGGCTGGCTGTCCAACACTGGCTGGAAGCCCAAGATaGAGGTGCCAGCTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: SCPLSFPRQRCEAGCPTLAGSPR*RCQLAL
Trigger: GAGAGCGAGCTGGCACCTTCATCTTGGGCTTCCAGC...CAGTGTTGGACAGCCAGCCTCACACCTCTGCCTTGGGAAGGACAGGGGACAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp AGCTGTCCCCTGTCCTTCCCAAGGCAGAGGTGTGAGGCTGGCTGTCCAACACTGAACCCCCTGGTTCTCTaGGCCTCTCCTTCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: SCPLSFPRQRCEAGCPTLNPLVL*ASPSRG
Trigger: TCCCCTGGAAGGAGAGGCTCAGAGAACCAGGGGGTT...CAGTGTTGGACAGCCAGCCTCACACCTCTGCCTTGGGAAGGACAGGGGACAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp CCATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACGCAGTGCGCACACTCTaGAGGGCTGAGGGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: PCLKGCWLWVSAWSWRNYAVRTL*RAEGAW
Trigger: CCACGCCCCCTCAGCCCTGCAGAGTGTGCGCACTGC...GTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TGGCCCAAGGCTCAGGGTCCAAGCAAAACGCAGCTTCACACCCAGGGAGGGGCTTGTCAGGGAGACCACTaGCATGCCGTCCCAGTGGAT +
Preference number: 4 (lower is better)
Translates to: WPKAQGPSKTQLHTQGGACQGDH*HAVPVD
Trigger: ATCCACTGGGACGGCATGGCAGTGGTCTCCCTGACA...AGCCCCTCCCTGGGTGTGAAGCTGCGTTTTGCTTGGACCCTGAGCCTTGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp CATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCAACACGGCCTGGAACTaGCTCCGCGCCCCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: HALRAAGCGCLLGPGETTNTAWN*LRAPEG
Trigger: CCCCTCTGGGGCGCGGAGGCAGTTCCAGGCCGTGTT...GGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTAAGGGTCCTCAGGGCGTaGGGGCCGCAGCAGGCGCTC +
Preference number: 4 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLRVLRA*GPQQAL
Trigger: GAGCGCCTGCTGCGGCCCGCACGCCCTGAGGACCCT...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp CATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCCAGCAGGGCCAGTCGTaGCAGCACAGGGGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: HALRAAGCGCLLGPGETTQQGQS*QHRGCL
Trigger: CAGGCAGCCCCTGTGCTGGCACGACTGGCCCTGCTG...GGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGAGGTGCCAGTGCGGTTaGCCTGAGTCGATTTTGATC +
Preference number: 4 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKRCQCG*PESILI
Trigger: GATCAAAATCGACTCAGGGCAACCGCACTGGCACCT...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp AGCTGTCCCCTGTCCTTCCCAAGGCAGAGGTGTGAGGCTGGCTGTCCAACACTGGACGTTGGGGCACGGTaGAGGGCTTTTTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SCPLSFPRQRCEAGCPTLDVGAR*RAFSRW
Trigger: CCACCTGGAAAAAGCCCTGCACCGTGCCCCAACGTC...CAGTGTTGGACAGCCAGCCTCACACCTCTGCCTTGGGAAGGACAGGGGACAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TCCCCGAGGTACTCAAGGTGGGAGGCACTGACCCTTTACCCAGACCCCTGTGGCGGGAAGTGGTGGATCTaGAGACAGCGTGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SPRYSRWEALTLYPDPCGGKWWI*RQRELL
Trigger: CAGGAGCTCACGCTGTCTGCAGATCCACCACTTCCC...GCCACAGGGGTCTGGGTAAAGGGTCAGTGCCTCCCACCTTGAGTACCTCGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGGAACCTGTCCCTGTCTaGCTAGGATTTGTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKEPVPV*LGFVCL
Trigger: GAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTC...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGAATTGGAGGCAGGCTTaGCCTAAGCAGTTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKNWRQA*PKQFPA
Trigger: AGCTGGGAACTGCTTAGGGCAAGCCTGCCTCCAATT...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TGGCCCAAGGCTCAGGGTCCAAGCAAAACGCAGCTTCACACCCAGGGAGGGGCTAGATTCCCTCGTGGGTaGTGGGGGACAGAGGGATGT +
Preference number: 4 (lower is better)
Translates to: WPKAQGPSKTQLHTQGGARFPRG*WGTEGC
Trigger: ACATCCCTCTGTCCCCCACCACCCACGAGGGAATCT...AGCCCCTCCCTGGGTGTGAAGCTGCGTTTTGCTTGGACCCTGAGCCTTGGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTAGGGGTTCGCTGCCGGTaGGATGGGCCTCGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLGVRCR*DGPRGP
Trigger: GGGCCCTCGAGGCCCATCCCACCGGCAGCGAACCCC...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TCTGCCTCAGTGCCGACTGGCCCACCTGACCCGAGGAACTTGCGTGTCCCTGAACATGGTGGAGGGGCTTaGGAGAACTCTGGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: SASVPTGPPDPRNLRVPEHGGGA*ENSGVS
Trigger: AGAGACCCCAGAGTTCTCCCAAGCCCCTCCACCATG...TTCAGGGACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGCACTGAGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CCATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACTCAGGGCAGAGGTGGTaGGCCGCGGGAACGGGCATG +
Preference number: 4 (lower is better)
Translates to: PCLKGCWLWVSAWSWRNYSGQRW*AAGTGM
Trigger: CATGCCCGTTCCCGCGGCCCACCACCTCTGCCCTGA...GTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TCTGCCTCAGTGCCGACTGGCCCACCTGACCCGAGGAACTTGCGTGTCCCTGAAGAGGTGGGGTTTCACTaGGAACCTGTCCCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: SASVPTGPPDPRNLRVPEEVGFH*EPVPVC
Trigger: GCAGACAGGGACAGGTTCCCAGTGAAACCCCACCTC...TTCAGGGACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGCACTGAGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TCCCCGAGGTACTCAAGGTGGGAGGCACTGACCCTTTACCCAGACCCCTGTGGCGGTCCGGGGCATTTATaGGCTCAGAATGGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: SPRYSRWEALTLYPDPCGGPGHL*AQNGGV
Trigger: CACTCCCCCATTCTGAGCCCATAAATGCCCCGGACC...GCCACAGGGGTCTGGGTAAAGGGTCAGTGCCTCCCACCTTGAGTACCTCGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp TGGCCCAAGGCTCAGGGTCCAAGCAAAACGCAGCTTCACACCCAGGGAGGGGCTCTGAAACGTGGGCACTaGGTGGGAAGGAACTGGATG +
Preference number: 4 (lower is better)
Translates to: WPKAQGPSKTQLHTQGGALKRGH*VGRNWM
Trigger: CATCCAGTTCCTTCCCACTCAGTGCCCACGTTTCAG...AGCCCCTCCCTGGGTGTGAAGCTGCGTTTTGCTTGGACCCTGAGCCTTGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGCTGGTTGTGGGTGTCTaGTTGGTCCTGGAGAAACTA +
Preference number: 4 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKLVVGV*LVLEKL
Trigger: TAGTTTCTCCAGGACCAAGCAGACACCCACAACCAG...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp AGCTGTCCCCTGTCCTTCCCAAGGCAGAGGTGTGAGGCTGGCTGTCCAACACTGGGACGAGTGCGTCCATaGCTTAAGGGCTGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: SCPLSFPRQRCEAGCPTLGRVRP*LKGCWL
Trigger: CAACCAGCAGCCCTTAAGGCATGGACGCACTCGTCC...CAGTGTTGGACAGCCAGCCTCACACCTCTGCCTTGGGAAGGACAGGGGACAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TCTGCCTCAGTGCCGACTGGCCCACCTGACCCGAGGAACTTGCGTGTCCCTGAACCTCTTTGGTCACTTTaGCAGCCAGGTACCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SASVPTGPPDPRNLRVPEPLWSL*QPGTSG
Trigger: GCCAGAGGTACCTGGCTGGCAAAGTGACCAAAGAGG...TTCAGGGACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGCACTGAGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp GAGAGGGCAGGGCAGGTACCTCCCCGATTTAGGGAGCTGGGTACACCCCTGGGCACAACAGAGAATGTGTaGACAGTGCCAGGCACAGGT +
Preference number: 4 (lower is better)
Translates to: ERAGQVPPRFRELGTPLGTTENV*TVPGTG
Trigger: ACCTGTGCCTGGCACTGTGCACACATTCTCTGTTGT...GCCCAGGGGTGTACCCAGCTCCCTAAATCGGGGAGGTACCTGCCCTGCCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp GATCCTGAGGTCCAGGAGGAGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTGGCGGTGTCACCAGACTaGACCAGCTTCTTCACCAAC +
Preference number: 4 (lower is better)
Translates to: DPEVQEEPQRGWHLHSALAVSPD*TSFFTN
Trigger: GTTGGTGAAGAAGCTGGTCCAGTCTGGTGACACCGC...CAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTCCTGGACCTCAGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CCATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCCAGTGTCTGGCAGCTaGCTCAGAAGGGCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: PCLKGCWLWVSAWSWRNYPVSGS*LRRARQ
Trigger: CTGCCGGGCCCTTCTGAGCCAGCTGCCAGACACTGG...GTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTAGGAACATGCGTGCAGTaGGGGCCCGGCCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLGTCVQ*GPGLAA
Trigger: GGCAGCCAGGCCGGGCCCCCACTGCACGCATGTTCC...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TGGCCCAAGGCTCAGGGTCCAAGCAAAACGCAGCTTCACACCCAGGGAGGGGCTCTGGCAGGCGGAAGATaGATCAAATTGGTGCCTGCG +
Preference number: 4 (lower is better)
Translates to: WPKAQGPSKTQLHTQGGALAGGR*IKLVPA
Trigger: CGCAGGCACCAATTTGATCCATCTTCCGCCTGCCAG...AGCCCCTCCCTGGGTGTGAAGCTGCGTTTTGCTTGGACCCTGAGCCTTGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CCATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCCCACTGCCTCCACCTaGCCCCGACATTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PCLKGCWLWVSAWSWRNYPTAST*PRHWSR
Trigger: CCTGCTCCAATGTCGGGGCCAGGTGGAGGCAGTGGG...GTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TGGCCCAAGGCTCAGGGTCCAAGCAAAACGCAGCTTCACACCCAGGGAGGGGCTGGACTGCCATGGCCATaGAAGAGTCCCTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: WPKAQGPSKTQLHTQGGAGLPWP*KSPLFL
Trigger: CAGGAACAAGGGACTCTTCCATGGCCATGGCAGTCC...AGCCCCTCCCTGGGTGTGAAGCTGCGTTTTGCTTGGACCCTGAGCCTTGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TGGCCCAAGGCTCAGGGTCCAAGCAAAACGCAGCTTCACACCCAGGGAGGGGCTTGGTCAAGATTCACCTaGGAGAGGAAGTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: WPKAQGPSKTQLHTQGGAWSRFT*ERKWAG
Trigger: CCCTGCCCACTTCCTCTCCCAGGTGAATCTTGACCA...AGCCCCTCCCTGGGTGTGAAGCTGCGTTTTGCTTGGACCCTGAGCCTTGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTATGGGTGGGGCTCCTATaGCCGCCCCGTGTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLWVGLL*PPRVGW
Trigger: CCAACCCACACGGGGCGGTCATAGGAGCCCCACCCA...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp TCCCCGAGGTACTCAAGGTGGGAGGCACTGACCCTTTACCCAGACCCCTGTGGCCTGACAGGTGTTTGTTaGGTCCTTGAGCACACGGGT +
Preference number: 4 (lower is better)
Translates to: SPRYSRWEALTLYPDPCGLTGVC*VLEHTG
Trigger: ACCCGTGTGCTCAAGGACTCAACAAACACCTGTCAG...GCCACAGGGGTCTGGGTAAAGGGTCAGTGCCTCCCACCTTGAGTACCTCGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp TCCCCGAGGTACTCAAGGTGGGAGGCACTGACCCTTTACCCAGACCCCTGTGGCGAAGGAACTGGATGCTaGAGCTTGGCATGGGGATGT +
Preference number: 4 (lower is better)
Translates to: SPRYSRWEALTLYPDPCGEGTGC*SLAWGC
Trigger: ACATCCCCATGCCAAGCTTCAGCATCCAGTTCCTTC...GCCACAGGGGTCTGGGTAAAGGGTCAGTGCCTCCCACCTTGAGTACCTCGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp GAGAGGGCAGGGCAGGTACCTCCCCGATTTAGGGAGCTGGGTACACCCCTGGGCCTGCCAATCGAAGTGTaGGAAGGGCAGAGAAGAATT +
Preference number: 4 (lower is better)
Translates to: ERAGQVPPRFRELGTPLGLPIEV*EGQRRI
Trigger: AATTCTTCTCTGCCCTTCTCACACTTCGATTGGCAG...GCCCAGGGGTGTACCCAGCTCCCTAAATCGGGGAGGTACCTGCCCTGCCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp TGGCCCAAGGCTCAGGGTCCAAGCAAAACGCAGCTTCACACCCAGGGAGGGGCTGACAGGCCCTCAAAGTaGCACAGTCAGGTACCTCTT +
Preference number: 4 (lower is better)
Translates to: WPKAQGPSKTQLHTQGGADRPSK*HSQVPL
Trigger: AAGAGGTACCTGACTGTGTCACTTTGAGGGCCTGTC...AGCCCCTCCCTGGGTGTGAAGCTGCGTTTTGCTTGGACCCTGAGCCTTGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp CCATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACTCTGCCAGGAGGAGGTaGCAGTGCGGTTGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: PCLKGCWLWVSAWSWRNYSARRR*QCGCPE
Trigger: CTCAGGGCAACCGCACTGGCACCTCCTCCTGGCAGA...GTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp AGCTGTCCCCTGTCCTTCCCAAGGCAGAGGTGTGAGGCTGGCTGTCCAACACTGTGCCATGAGAATGTCTaGCAGGAGGAGGTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SCPLSFPRQRCEAGCPTLCHENV*QEEVPV
Trigger: CACTGGCACCTCCTCCTGGCAGACATTCTCATGGCA...CAGTGTTGGACAGCCAGCCTCACACCTCTGCCTTGGGAAGGACAGGGGACAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTACCCGGCCTGGCTGCCTaGACAGGCTGTTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLPGLAA*TGCSGP
Trigger: TGGCCCAGAACAGCCTGTGCAGGCAGCCAGGCCGGG...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TCCCCGAGGTACTCAAGGTGGGAGGCACTGACCCTTTACCCAGACCCCTGTGGCAAGCTCACTGGCAGCTaGAAGGCCTGGGGACATTTA +
Preference number: 4 (lower is better)
Translates to: SPRYSRWEALTLYPDPCGKLTGS*KAWGHL
Trigger: TAAATGTCCCCAGGCCTTGCAGCTGCCAGTGAGCTT...GCCACAGGGGTCTGGGTAAAGGGTCAGTGCCTCCCACCTTGAGTACCTCGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp CATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCAAGGCTGGCTGCCTCTaGCCCACCCAGAAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: HALRAAGCGCLLGPGETTKAGCL*PTQKSP
Trigger: TGGGGACTTCTGGGTGGGGCAGAGGCAGCCAGCCTT...GGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TGGCCCAAGGCTCAGGGTCCAAGCAAAACGCAGCTTCACACCCAGGGAGGGGCTGAGACACATAGGCGGTaGCAGCTGATGAAGGTGCAT +
Preference number: 4 (lower is better)
Translates to: WPKAQGPSKTQLHTQGGAETHRR*QLMKVH
Trigger: ATGCACCTTCATCAGCTGGCACCGCCTATGTGTCTC...AGCCCCTCCCTGGGTGTGAAGCTGCGTTTTGCTTGGACCCTGAGCCTTGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TCCCCGAGGTACTCAAGGTGGGAGGCACTGACCCTTTACCCAGACCCCTGTGGCCTGACCCGAGGAACTTaGGTGTCCCTGAACTTAGCT +
Preference number: 4 (lower is better)
Translates to: SPRYSRWEALTLYPDPCGLTRGT*VSLNLA
Trigger: AGCTAAGTTCAGGGACACGCAAGTTCCTCGGGTCAG...GCCACAGGGGTCTGGGTAAAGGGTCAGTGCCTCCCACCTTGAGTACCTCGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGGCTTACCTGGCCAGGTaGCTAGAAATGATGCTCATT +
Preference number: 4 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKAYLAR*LEMMLI
Trigger: AATGAGCATCATTTCTAGGCACCTGGCCAGGTAAGC...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp GAGAGGGCAGGGCAGGTACCTCCCCGATTTAGGGAGCTGGGTACACCCCTGGGCGGGCATGTTCCAGCCTaGTTGTGTTATAGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: ERAGQVPPRFRELGTPLGGHVPA*LCYSLY
Trigger: GTACAAGCTATAACACAAGCAGGCTGGAACATGCCC...GCCCAGGGGTGTACCCAGCTCCCTAAATCGGGGAGGTACCTGCCCTGCCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TCCCCGAGGTACTCAAGGTGGGAGGCACTGACCCTTTACCCAGACCCCTGTGGCAGAATGTGTGCACAGTaGCAGGCACAGGTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: SPRYSRWEALTLYPDPCGRMCAQ*QAQVWS
Trigger: TGACCACACCTGTGCCTGGCACTGTGCACACATTCT...GCCACAGGGGTCTGGGTAAAGGGTCAGTGCCTCCCACCTTGAGTACCTCGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCACGCGCTCCTGGTCCTaGACAGAGAACACGGCCTGG +
Preference number: 4 (lower is better)
Translates to: HALRAAGCGCLLGPGETTTRSWS*TENTAW
Trigger: CCAGGCCGTGTTCTCTGTCCAGGACCAGGAGCGCGT...GGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTAAGTGGGGGCCCGGCCTaGCTGCCTGCACAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLSGGPA*LPAQAV
Trigger: AACAGCCTGTGCAGGCAGCCAGGCCGGGCCCCCACT...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCCCCTGCCTGACCCCCTaGACTGGGGTTCGTCAGATG +
Preference number: 4 (lower is better)
Translates to: HALRAAGCGCLLGPGETTPCLTP*TGVRQM
Trigger: CATCTGACGAACCCCAGTCCAGGGGGTCAGGCAGGG...GGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp AGCTGTCCCCTGTCCTTCCCAAGGCAGAGGTGTGAGGCTGGCTGTCCAACACTGCCGAGGTACTCAAGGTaGGAGGCACTGACCCTTTAC +
Preference number: 4 (lower is better)
Translates to: SCPLSFPRQRCEAGCPTLPRYSR*EALTLY
Trigger: GTAAAGGGTCAGTGCCTCCCACCTTGAGTACCTCGG...CAGTGTTGGACAGCCAGCCTCACACCTCTGCCTTGGGAAGGACAGGGGACAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TCCCCGAGGTACTCAAGGTGGGAGGCACTGACCCTTTACCCAGACCCCTGTGGCGAAGATGGATCAAATTaGTGCCTGCGCTGGGGAACC +
Preference number: 4 (lower is better)
Translates to: SPRYSRWEALTLYPDPCGEDGSN*CLRWGT
Trigger: GGTTCCCCAGCGCAGGCACCAATTTGATCCATCTTC...GCCACAGGGGTCTGGGTAAAGGGTCAGTGCCTCCCACCTTGAGTACCTCGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCCCTTGCACGGATGGATaGGGCAGGACATCCCAGGCG +
Preference number: 4 (lower is better)
Translates to: HALRAAGCGCLLGPGETTPCTDG*GRTSQA
Trigger: CGCCTGGGATGTCCTGCCCCATCCATCCGTGCAAGG...GGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGGGCTTGGGAGAACTCTaGGGTCTCTTTTATAAGGAC +
Preference number: 4 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKGLGEL*GLFYKD
Trigger: GTCCTTATAAAAGAGACCCCAGAGTTCTCCCAAGCC...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCCCCACTCAGCCTGCCTaGGCCACACCTGGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: HALRAAGCGCLLGPGETTPTQPA*ATPGCS
Trigger: TGAACAGCCAGGTGTGGCCCAGGCAGGCTGAGTGGG...GGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGGGGAATGACTTTGAATaGAATTGGAGGCAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKGNDFE*NWRQAC
Trigger: GCAAGCCTGCCTCCAATTCCATTCAAAGTCATTCCC...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp CATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCAGGACTTGCTGTGCATaGGAGTCCAGCAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: HALRAAGCGCLLGPGETTRTCCA*ESSRAL
Trigger: CAGCGCCCTGCTGGACTCTCATGCACAGCAAGTCCT...GGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp CCATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCAAGGTGGGAGGCACTaGCCCTTTACCCAGACCCCT +
Preference number: 4 (lower is better)
Translates to: PCLKGCWLWVSAWSWRNYQGGRH*PFTQTP
Trigger: AGGGGTCTGGGTAAAGGGTCAGTGCCTCCCACCTTG...GTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp GATCCTGAGGTCCAGGAGGAGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTGTGGGGGAGTGCATGCTaGTTGGCTTCTGATTATGCA +
Preference number: 4 (lower is better)
Translates to: DPEVQEEPQRGWHLHSALWGSAC*LASDYA
Trigger: TGCATAATCAGAAGCCAATCAGCATGCACTCCCCCA...CAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTCCTGGACCTCAGGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp TACCTGCCGCAGGAGGTGGCCCACCCACTCAGCCTGCCTGGGCCACACCTGGCTAGAGAAGAATTTTATTaGGAGACGGAACAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: YLPQEVAHPLSLPGPHLAREEFY*ETEQLS
Trigger: TGAGAGCTGTTCCGTCTCTCAATAAAATTCTTCTCT...AGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp CATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCAGGAGTGTGCCCACCTaGGCTGAAAGGCTGCATGGC +
Preference number: 4 (lower is better)
Translates to: HALRAAGCGCLLGPGETTRSVPT*AERLHG
Trigger: GCCATGCAGCCTTTCAGCTCAGGTGGGCACACTCCT...GGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTAACCTCGGCCAGGCTCTaGAGGTCCCTTGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLTSARL*RSLAAP
Trigger: AGGGGCTGCAAGGGACCTGCAGAGCCTGGCCGAGGT...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp CCATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACGGTGACAGGCACTGCTaGCACTGGCCAGGACAGACA +
Preference number: 4 (lower is better)
Translates to: PCLKGCWLWVSAWSWRNYGDRHC*HWPGQT
Trigger: TGTCTGTCCTGGCCAGTGGCAGCAGTGCCTGTCACC...GTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTAGAGAAGGAACATGCGTaGAGTGGGGGCCCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLEKEHA*SGGPAW
Trigger: CCAGGCCGGGCCCCCACTGCACGCATGTTCCTTCTC...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTAAGCCCTTGCCTCCTCTaGCTCAGTGCCGACTGGCCC +
Preference number: 4 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLSPCLL*LSADWP
Trigger: GGGCCAGTCGGCACTGAGGCAGAGGAGGCAAGGGCT...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTATCGCGGAGCTCAGGGTaGTTCCGCACGGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLSRSSG*FRTASW
Trigger: CCAGGAAGCCGTGCGGAACCACCCTGAGCTCCGCGA...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp GATCCTGAGGTCCAGGAGGAGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTGTCTTCACCAACTGGTTaGCGTCATAGAAGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: DPEVQEEPQRGWHLHSALSSPTG*RHRRSP
Trigger: GGGGCTTCTTCTATGACGCCAACCAGTTGGTGAAGA...CAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTCCTGGACCTCAGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCAGGCACTGCTGCCACTaGCCAGGACAGACAGCGAAC +
Preference number: 4 (lower is better)
Translates to: HALRAAGCGCLLGPGETTRHCCH*PGQTAN
Trigger: GTTCGCTGTCTGTCCTGGCCAGTGGCAGCAGTGCCT...GGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCACCTGGCCCCGACATTaGAGCAGGCCCTTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: HALRAAGCGCLLGPGETTTWPRH*SRPFCC
Trigger: ACAGCAGAAGGGCCTGCTCCAATGTCGGGGCCAGGT...GGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp GATCCTGAGGTCCAGGAGGAGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTGATGAAGGGGAGATGCTaGAATGTCCCTGGTGTAACG +
Preference number: 4 (lower is better)
Translates to: DPEVQEEPQRGWHLHSALMKGRC*NVPGVT
Trigger: CGTTACACCAGGGACATTCCAGCATCTCCCCTTCAT...CAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTCCTGGACCTCAGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp AGCTGTCCCCTGTCCTTCCCAAGGCAGAGGTGTGAGGCTGGCTGTCCAACACTGTGTGTGACTGCTGTGTaGCTCACACTCACAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SCPLSFPRQRCEAGCPTLCVTAV*LTLTAS
Trigger: TGAGGCTGTGAGTGTGAGCCACACAGCAGTCACACA...CAGTGTTGGACAGCCAGCCTCACACCTCTGCCTTGGGAAGGACAGGGGACAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp AGCTGTCCCCTGTCCTTCCCAAGGCAGAGGTGTGAGGCTGGCTGTCCAACACTGGGGATTAGGTTAGTGTaGTTGTTGCTTGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SCPLSFPRQRCEAGCPTLGIRLV*LLLGLG
Trigger: GCCCAGCCCAAGCAACAACCACACTAACCTAATCCC...CAGTGTTGGACAGCCAGCCTCACACCTCTGCCTTGGGAAGGACAGGGGACAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGAGGAAAGCAGCCAAATaGGAAGATGGGTTCTCAATC +
Preference number: 4 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKRKAAK*EDGFSI
Trigger: GATTGAGAACCCATCTTCCCATTTGGCTGCTTTCCT...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CAA 72 bp CAGGGACGAGTGCGTCCATGCCTTAAGGGCTGCTGGTaGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCTC +
Preference number: 4 (lower is better)
Translates to: QGRVRPCLKGCW*WVSAWSWRNYL
Trigger: GAGGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATGGACGCACTCGTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp CATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCAAGGATGCACACCTGTaGCACAGCCTCAGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: HALRAAGCGCLLGPGETTKDAHL*HSLRRS
Trigger: GGACCTCCTGAGGCTGTGTCACAGGTGTGCATCCTT...GGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp CCATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACGGCAGTCCTCAAACCTaGCGCTGTGGAGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: PCLKGCWLWVSAWSWRNYGSPQT*RCGAEL
Trigger: AAGCTCTGCTCCACAGCGGCAGGTTTGAGGACTGCC...GTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp CCATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACAGGAGGAGGTGCCAGTaGGGTTGCCCTGAGTCGATT +
Preference number: 4 (lower is better)
Translates to: PCLKGCWLWVSAWSWRNYRRRCQ*GCPESI
Trigger: AATCGACTCAGGGCAACCGCACTGGCACCTCCTCCT...GTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp CATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCGATGGATCAAATTGGTaGCTGCGCTGGGGAACCCCG +
Preference number: 4 (lower is better)
Translates to: HALRAAGCGCLLGPGETTDGSNW*LRWGTP
Trigger: CGGGGTTCCCCAGCGCAGGCACCAATTTGATCCATC...GGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp AGCTGGACCGGCTTGGCTTTATTGATGCAGGTACACTTACTAGAGATTCTGAATTCGCTGCCGGTGGGATaGGCCTCGAGGGCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: SWTGLALLMQVHLLEILNSLPVG*ASRARL
Trigger: CAGCCGGGCCCTCGAGGCCCATCCCACCGGCAGCGA...ATTCAGAATCTCTAGTAAGTGTACCTGCATCAATAAAGCCAAGCCGGTCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCGAGACAGGTAGGCGATaGCCTCCTTGGTGTGAACCC +
Preference number: 4 (lower is better)
Translates to: HALRAAGCGCLLGPGETTETGRR*PPWCEP
Trigger: GGGTTCACACCAAGGAGGCCATCGCCTACCTGTCTC...GGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TCCCCGAGGTACTCAAGGTGGGAGGCACTGACCCTTTACCCAGACCCCTGTGGCGTGAAGCTTCTAGGATaGTCCCTTCATGCAAGTAGG +
Preference number: 4 (lower is better)
Translates to: SPRYSRWEALTLYPDPCGVKLLG*SLHASR
Trigger: CCTACTTGCATGAAGGGACCATCCTAGAAGCTTCAC...GCCACAGGGGTCTGGGTAAAGGGTCAGTGCCTCCCACCTTGAGTACCTCGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CCATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCACTGGGTCTCCACATaGTGGAGGGGCTTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: PCLKGCWLWVSAWSWRNYHWVST*WRGLGE
Trigger: TTCTCCCAAGCCCCTCCACCATGTGGAGACCCAGTG...GTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp GATCCTGAGGTCCAGGAGGAGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTGGTGTCTGCTTGGTCCTaGAGAAACTACCTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: DPEVQEEPQRGWHLHSALVSAWS*RNYLRK
Trigger: TTTCCTGAGGTAGTTTCTCCAGGACCAAGCAGACAC...CAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTCCTGGACCTCAGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTAGACAGCGTGAGCTCCTaGAGCGTCAGGACCCAGAGC +
Preference number: 4 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLDSVSS*SVRTQS
Trigger: GCTCTGGGTCCTGACGCTCCAGGAGCTCACGCTGTC...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTAAGCTCAGCCTGTGGCTaGGCTGGGCATGTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLSSACG*AGHVPA
Trigger: GGCTGGAACATGCCCAGCCCAGCCACAGGCTGAGCT...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CAA 72 bp AGAGAATCAGGACTGCCATGGCCATGGAAGAGTCCCTaGTTCCTGAGAGCCTCGGGGCTGCTGCTGCTACAA +
Preference number: 4 (lower is better)
Translates to: RESGLPWPWKSP*FLRASGLLLLQ
Trigger: TTGTAGCAGCAGCAGCCCCGAGGCTCTCAGGAACAAGGGACTCTTCCATGGCCATGGCAGTCCTGATTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTACTCTCCACCTCCAGCTaGGCACTGAGGAAGACGCAG +
Preference number: 4 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLLSTSS*ALRKTQ
Trigger: CTGCGTCTTCCTCAGTGCTCAGCTGGAGGTGGAGAG...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp CAGCCTTGCACGGATGGATGGGGCAGGACATCCCAGGCGAGGAGGACGGTAGGAATTAGCTGCTGGAAATaGCTCTACCAGTTTACTTGG +
Preference number: 4 (lower is better)
Translates to: QPCTDGWGRTSQARRTVGISCWK*LYQFTW
Trigger: CCAAGTAAACTGGTAGAGTCATTTCCAGCAGCTAAT...TCCTACCGTCCTCCTCGCCTGGGATGTCCTGCCCCATCCATCCGTGCAAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp AGCTGGACCGGCTTGGCTTTATTGATGCAGGTACACTTACTAGAGATTCTGAATGGGTGTCACTCCGGGTaGCCCTGGGGTCCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: SWTGLALLMQVHLLEILNGCHSG*PWGPEP
Trigger: CGGCTCTGGACCCCAGGGGCACCCGGAGTGACACCC...ATTCAGAATCTCTAGTAAGTGTACCTGCATCAATAAAGCCAAGCCGGTCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp AGCTGGACCGGCTTGGCTTTATTGATGCAGGTACACTTACTAGAGATTCTGAATGGGGCCCGGCCTGGCTaGCTGCACAGGCTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SWTGLALLMQVHLLEILNGARPG*LHRLFW
Trigger: CCAGAACAGCCTGTGCAGGCAGCCAGGCCGGGCCCC...ATTCAGAATCTCTAGTAAGTGTACCTGCATCAATAAAGCCAAGCCGGTCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTATCCAACACTGACTCATaGTGGGGCAGGGAAGCGGGG +
Preference number: 4 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLSNTDS*WGREAG
Trigger: CCCCGCTTCCCTGCCCCAGCATGAGTCAGTGTTGGA...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTACAAGAGGGCCCCAACTaGAGGGACCAGGTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLQEGPN*RDQVAG
Trigger: ACCAGCAACCTGGTCCCTGCAGTTGGGGCCCTCTTG...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TCCCCGAGGTACTCAAGGTGGGAGGCACTGACCCTTTACCCAGACCCCTGTGGCTTTGTCTATCTGGACTaGCCCAACAGAATAGCAGAG +
Preference number: 4 (lower is better)
Translates to: SPRYSRWEALTLYPDPCGFVYLD*PNRIAE
Trigger: CTCTGCTATTCTGTTGGGGCAGTCCAGATAGACAAA...GCCACAGGGGTCTGGGTAAAGGGTCAGTGCCTCCCACCTTGAGTACCTCGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp AGCTGGACCGGCTTGGCTTTATTGATGCAGGTACACTTACTAGAGATTCTGAATGGACGGCCCGGCGCGTaGAGATCGCTGCAGCATCCC +
Preference number: 4 (lower is better)
Translates to: SWTGLALLMQVHLLEILNGRPGA*RSLQHP
Trigger: GGGATGCTGCAGCGATCTCCACGCGCCGGGCCGTCC...ATTCAGAATCTCTAGTAAGTGTACCTGCATCAATAAAGCCAAGCCGGTCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCTTCCTGCGGCAAAGATaGCCAGAGACAGGTAGGCGA +
Preference number: 4 (lower is better)
Translates to: HALRAAGCGCLLGPGETTFLRQR*PETGRR
Trigger: TCGCCTACCTGTCTCTGGCCATCTTTGCCGCAGGAA...GGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp AGCTGGACCGGCTTGGCTTTATTGATGCAGGTACACTTACTAGAGATTCTGAATTGCTCAGGGCAGAGGTaGTGGGCCGCGGGAACGGGC +
Preference number: 4 (lower is better)
Translates to: SWTGLALLMQVHLLEILNCSGQR*WAAGTG
Trigger: GCCCGTTCCCGCGGCCCACCACCTCTGCCCTGAGCA...ATTCAGAATCTCTAGTAAGTGTACCTGCATCAATAAAGCCAAGCCGGTCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTAAGGAAAAGCCAGGGCTaGACCCCAGCAGGGATGGGA +
Preference number: 4 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLRKSQG*TPAGMG
Trigger: TCCCATCCCTGCTGGGGTCCAGCCCTGGCTTTTCCT...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCTCTTTGGCTCGGAGGTaGGGTTTCACTGGGAACCTG +
Preference number: 4 (lower is better)
Translates to: HALRAAGCGCLLGPGETTSLARR*GFTGNL
Trigger: CAGGTTCCCAGTGAAACCCCACCTCCGAGCCAAAGA...GGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp GAGAGGGCAGGGCAGGTACCTCCCCGATTTAGGGAGCTGGGTACACCCCTGGGCGGAGTGCATGCTGATTaGCTTCTGATTATGCAAAAA +
Preference number: 4 (lower is better)
Translates to: ERAGQVPPRFRELGTPLGGVHAD*LLIMQK
Trigger: TTTTTGCATAATCAGAAGCCAATCAGCATGCACTCC...GCCCAGGGGTGTACCCAGCTCCCTAAATCGGGGAGGTACCTGCCCTGCCCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CAA 72 bp TCAGCCTGTGGCTGGGCTGGGCATGTTCCAGCCTGCTaGTGTTATAGCTTGTACCCATGTATGGCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: SACGWAGHVPAC*CYSLYPCMAVP
Trigger: GGGAACTGCCATACATGGGTACAAGCTATAACACAAGCAGGCTGGAACATGCCCAGCCCAGCCACAGGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CAA 72 bp AGACAGGCCCTCAAAGTGACACAGTCAGGTACCTCTTaGGTCACTTTGCCAGCCAGGTACCTCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RQALKVTQSGTS*VTLPARYLWLL
Trigger: CAGCAGCCAGAGGTACCTGGCTGGCAAAGTGACCAAAGAGGTACCTGACTGTGTCACTTTGAGGGCCTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTACCAGTGCGGTTGCCCTaGGTCGATTTTGATCAGCGC +
Preference number: 4 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLPVRLP*VDFDQR
Trigger: GCGCTGATCAAAATCGACTCAGGGCAACCGCACTGG...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTAGAAACACAGCGATCCTaGGGTCCAGGAGGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLETQRS*GPGGAS
Trigger: TGAGGCTCCTCCTGGACCTCAGGATCGCTGTGTTTC...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp AGCTGGACCGGCTTGGCTTTATTGATGCAGGTACACTTACTAGAGATTCTGAATCGCCCGTCCACACAGTaGCTGCACGTTCCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: SWTGLALLMQVHLLEILNRPSTQ*LHVPRL
Trigger: GAGCCGGGGAACGTGCAGGCACTGTGTGGACGGGCG...ATTCAGAATCTCTAGTAAGTGTACCTGCATCAATAAAGCCAAGCCGGTCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTACTTGGGGGCACGTTTTaGACCGAGTCAGCTCACCCA +
Preference number: 4 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLLGGTF*TESAHP
Trigger: TGGGTGAGCTGACTCGGTGCAAAACGTGCCCCCAAG...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTACAGAAGCGAAGTGGGTaGAGAGGCAGGGGGTCTATC +
Preference number: 4 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLQKRSG*RGRGSI
Trigger: GATAGACCCCCTGCCTCTCCACCCACTTCGCTTCTG...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTATGCCCAGGGAAGTGGTaGATCTGCAGACAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLCPGKW*ICRQRE
Trigger: CTCACGCTGTCTGCAGATCCACCACTTCCCTGGGCA...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CCATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACGGCCCACAGTGTTGTTaGGGGAGCTTCACAGTTAAC +
Preference number: 4 (lower is better)
Translates to: PCLKGCWLWVSAWSWRNYGPQCC*GSFTVN
Trigger: GTTAACTGTGAAGCTCCCCCAACAACACTGTGGGCC...GTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp AGCTGGACCGGCTTGGCTTTATTGATGCAGGTACACTTACTAGAGATTCTGAATGCAGCCTGCAGGCGGTaGCATAGTCCAGCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SWTGLALLMQVHLLEILNAACRR*HSPACP
Trigger: TGGGCACGCTGGACTATGTCACCGCCTGCAGGCTGC...ATTCAGAATCTCTAGTAAGTGTACCTGCATCAATAAAGCCAAGCCGGTCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTACTCGTAGCTGCCCTGTaGCATGAGAATGTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLLVAAL*HENVCQ
Trigger: CTGGCAGACATTCTCATGGCACAGGGCAGCTACGAG...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp CAACAGAATAGCAGAGACAGGTGGTTCATCAACAGATACTTATTTCTCACAGTTCTGCGTCCAGGAGGGTaGCGGCTTCCTGGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: QQNSRDRWFINRYLFLTVLRPGG*RLPGPP
Trigger: CGGCGGCCCAGGAAGCCGGCACCCTCCTGGACGCAG...AACTGTGAGAAATAAGTATCTGTTGATGAACCACCTGTCTCTGCTATTCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp CCATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCAGAAATGGGACAAATaGAAGTGCCCAGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: PCLKGCWLWVSAWSWRNYQKWDK*KCPGGE
Trigger: CTCTCCTCCTGGGCACTTGCATTTGTCCCATTTCTG...GTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTAATCTACACTCAGCCTTaGACGGATGGATGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLIYTQP*TDGWGR
Trigger: CCTGCCCCATCCATCCGTGCAAGGCTGAGTGTAGAT...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp CAGCCTTGCACGGATGGATGGGGCAGGACATCCCAGGCGAGGAGGACGGTAGGAAATGAAATCTGGATTTaGTGGCGGTCTACAGTTAAT +
Preference number: 4 (lower is better)
Translates to: QPCTDGWGRTSQARRTVGNEIWI*WRSTVN
Trigger: ATTAACTGTAGACCGCCAGCAAATCCAGATTTCATT...TCCTACCGTCCTCCTCGCCTGGGATGTCCTGCCCCATCCATCCGTGCAAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp CATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCACAGAGAATCAGGACTaGCATGGCCATGGAAGAGTC +
Preference number: 4 (lower is better)
Translates to: HALRAAGCGCLLGPGETTTENQD*HGHGRV
Trigger: GACTCTTCCATGGCCATGGCAGTCCTGATTCTCTGT...GGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp AGCTGGACCGGCTTGGCTTTATTGATGCAGGTACACTTACTAGAGATTCTGAATTTCCGCACGGCTTCCTaGAAGCGGGCGAAGCCCACG +
Preference number: 4 (lower is better)
Translates to: SWTGLALLMQVHLLEILNFRTAS*KRAKPT
Trigger: CGTGGGCTTCGCCCGCTTCCAGGAAGCCGTGCGGAA...ATTCAGAATCTCTAGTAAGTGTACCTGCATCAATAAAGCCAAGCCGGTCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp AGCTGGACCGGCTTGGCTTTATTGATGCAGGTACACTTACTAGAGATTCTGAATCCAGGGAGGGGCTTCTaGGGCTGGTACCATCTCCCC +
Preference number: 4 (lower is better)
Translates to: SWTGLALLMQVHLLEILNPGRGF*GWYHLP
Trigger: GGGGAGATGGTACCAGCCCCAGAAGCCCCTCCCTGG...ATTCAGAATCTCTAGTAAGTGTACCTGCATCAATAAAGCCAAGCCGGTCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CCATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACTTGTGGGTGTCTGCTTaGTCCTGGAGAAACTACCTC +
Preference number: 4 (lower is better)
Translates to: PCLKGCWLWVSAWSWRNYLWVSA*SWRNYL
Trigger: GAGGTAGTTTCTCCAGGACCAAGCAGACACCCACAA...GTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp CAACAGAATAGCAGAGACAGGTGGTTCATCAACAGATACTTATTTCTCACAGTTCTGCAGCTTGGAGGCTaGGCCGGCTGTGCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: QQNSRDRWFINRYLFLTVLQLGG*AGCALG
Trigger: CCCCAGGGCACAGCCGGCTCAGCCTCCAAGCTGCAG...AACTGTGAGAAATAAGTATCTGTTGATGAACCACCTGTCTCTGCTATTCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp GATCCTGAGGTCCAGGAGGAGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTGCATTTTAGGGAGATATaGGACATCAATCAACACATG +
Preference number: 4 (lower is better)
Translates to: DPEVQEEPQRGWHLHSALHFREI*DINQHM
Trigger: CATGTGTTGATTGATGTCTCATATCTCCCTAAAATG...CAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTCCTGGACCTCAGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp AGCTGGACCGGCTTGGCTTTATTGATGCAGGTACACTTACTAGAGATTCTGAATGGCCCGGCTGCATGCTaGCAGGCAGTCCTCAAACCT +
Preference number: 4 (lower is better)
Translates to: SWTGLALLMQVHLLEILNGPAAC*QAVLKP
Trigger: AGGTTTGAGGACTGCCTGGCAGCATGCAGCCGGGCC...ATTCAGAATCTCTAGTAAGTGTACCTGCATCAATAAAGCCAAGCCGGTCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CCATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACGACTTTGAATGGAATTaGAGGCAGGCTTGCCCTAAG +
Preference number: 4 (lower is better)
Translates to: PCLKGCWLWVSAWSWRNYDFEWN*RQACPK
Trigger: CTTAGGGCAAGCCTGCCTCCAATTCCATTCAAAGTC...GTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp AGCTGTCCCCTGTCCTTCCCAAGGCAGAGGTGTGAGGCTGGCTGTCCAACACTGACCAGTTTACTTGGTTaGATGAAATCTGGATTTGCT +
Preference number: 4 (lower is better)
Translates to: SCPLSFPRQRCEAGCPTLTSLLG*MKSGFA
Trigger: AGCAAATCCAGATTTCATTCAACCAAGTAAACTGGT...CAGTGTTGGACAGCCAGCCTCACACCTCTGCCTTGGGAAGGACAGGGGACAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp CAACAGAATAGCAGAGACAGGTGGTTCATCAACAGATACTTATTTCTCACAGTTGGGTGCGGCGCCCCCTaGTCCACTACCGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: QQNSRDRWFINRYLFLTVGCGAP*STTVWK
Trigger: CTTCCAGACGGTAGTGGAGCAGGGGGCGCCGCACCC...AACTGTGAGAAATAAGTATCTGTTGATGAACCACCTGTCTCTGCTATTCTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp AGCTGGACCGGCTTGGCTTTATTGATGCAGGTACACTTACTAGAGATTCTGAATTCTCCCACTGTGGGCTaGCCATCCCCGAGGTACTCA +
Preference number: 4 (lower is better)
Translates to: SWTGLALLMQVHLLEILNSPTVG*PSPRYS
Trigger: TGAGTACCTCGGGGATGGGCAGCCCACAGTGGGAGA...ATTCAGAATCTCTAGTAAGTGTACCTGCATCAATAAAGCCAAGCCGGTCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp AGCTGGACCGGCTTGGCTTTATTGATGCAGGTACACTTACTAGAGATTCTGAATTCAGCAGAGAGGGGATaGACGGGTGGTTCCCGACCT +
Preference number: 4 (lower is better)
Translates to: SWTGLALLMQVHLLEILNSAERG*TGGSRP
Trigger: AGGTCGGGAACCACCCGTGCATCCCCTCTCTGCTGA...ATTCAGAATCTCTAGTAAGTGTACCTGCATCAATAAAGCCAAGCCGGTCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CAACAGAATAGCAGAGACAGGTGGTTCATCAACAGATACTTATTTCTCACAGTTACCAGCAGGGCCTTGTaGGTCTCCTCCAGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: QQNSRDRWFINRYLFLTVTSRAL*VSSRRP
Trigger: GGGCCGCCTGGAGGAGACCCACAAGGCCCTGCTGGT...AACTGTGAGAAATAAGTATCTGTTGATGAACCACCTGTCTCTGCTATTCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp AGCTGGACCGGCTTGGCTTTATTGATGCAGGTACACTTACTAGAGATTCTGAATCCTGACCCCCTGGACTaGGGTTCGTCAGATGATCCC +
Preference number: 4 (lower is better)
Translates to: SWTGLALLMQVHLLEILNPDPLD*GSSDDP
Trigger: GGGATCATCTGACGAACCCCAGTCCAGGGGGTCAGG...ATTCAGAATCTCTAGTAAGTGTACCTGCATCAATAAAGCCAAGCCGGTCCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CAA 72 bp TGGGCTGGGCATGTTCCAGCCTGCTTGTGTTATAGCTaGTACCCATGTATGGCAGTTCCCAAGTTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: WAGHVPACLCYS*YPCMAVPKFLS
Trigger: GGACAAGAACTTGGGAACTGCCATACATGGGTACAAGCTATAACACAAGCAGGCTGGAACATGCCCAGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp AGCTGGACCGGCTTGGCTTTATTGATGCAGGTACACTTACTAGAGATTCTGAATAGAGGCCTCGTCCTCTaGATCCAGCTCCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: SWTGLALLMQVHLLEILNRGLVL*IQLHQQ
Trigger: CTGCTGATGGAGCTGGATTCAGAGGACGAGGCCTCT...ATTCAGAATCTCTAGTAAGTGTACCTGCATCAATAAAGCCAAGCCGGTCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp AGCTGGACCGGCTTGGCTTTATTGATGCAGGTACACTTACTAGAGATTCTGAATAGCTGCCCTGTGCCATaGGAATGTCTGCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: SWTGLALLMQVHLLEILNSCPVP*ECLPGG
Trigger: TCCTCCTGGCAGACATTCTCATGGCACAGGGCAGCT...ATTCAGAATCTCTAGTAAGTGTACCTGCATCAATAAAGCCAAGCCGGTCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp AGCTGGACCGGCTTGGCTTTATTGATGCAGGTACACTTACTAGAGATTCTGAATCTGGGGTTCGTCAGATaGTCCCAGAAGCGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: SWTGLALLMQVHLLEILNLGFVR*SQKRSG
Trigger: CCCACTTCGCTTCTGGGATCATCTGACGAACCCCAG...ATTCAGAATCTCTAGTAAGTGTACCTGCATCAATAAAGCCAAGCCGGTCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp CAACAGAATAGCAGAGACAGGTGGTTCATCAACAGATACTTATTTCTCACAGTTAGGCTGAGCCGGCTGTaGCCTGGGGACCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: QQNSRDRWFINRYLFLTVRLSRL*PGDPDS
Trigger: GGAATCTGGGTCCCCAGGGCACAGCCGGCTCAGCCT...AACTGTGAGAAATAAGTATCTGTTGATGAACCACCTGTCTCTGCTATTCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp AGCTGGACCGGCTTGGCTTTATTGATGCAGGTACACTTACTAGAGATTCTGAATGATCAAATTGGTGCCTaGGCTGGGGAACCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: SWTGLALLMQVHLLEILNDQIGA*AGEPRK
Trigger: CTTCCGGGGTTCCCCAGCGCAGGCACCAATTTGATC...ATTCAGAATCTCTAGTAAGTGTACCTGCATCAATAAAGCCAAGCCGGTCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CAACAGAATAGCAGAGACAGGTGGTTCATCAACAGATACTTATTTCTCACAGTTGGATGGCCAGGGCCCTaGCGTGGCAGTGGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: QQNSRDRWFINRYLFLTVGWPGP*RGSGLE
Trigger: TTCAAGGCCACTGCCACGCCAGGGCCCTGGCCATCC...AACTGTGAGAAATAAGTATCTGTTGATGAACCACCTGTCTCTGCTATTCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp AGCTGGACCGGCTTGGCTTTATTGATGCAGGTACACTTACTAGAGATTCTGAATTCAGCCTTGCACGGATaGATGGGGCAGGACATCCCA +
Preference number: 4 (lower is better)
Translates to: SWTGLALLMQVHLLEILNSALHG*MGQDIP
Trigger: TGGGATGTCCTGCCCCATCCATCCGTGCAAGGCTGA...ATTCAGAATCTCTAGTAAGTGTACCTGCATCAATAAAGCCAAGCCGGTCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
3UTR CAA 72 bp AGATATGCATCTATCTCAGCGAGCGGGGGAATGACTTaGAATGGAATTGGAGGCAGGCTTGCCCTAAGCAGT +
Preference number: 4 (lower is better)
Translates to: RYASISASGGMT*NGIGGRLALSS
Trigger: ACTGCTTAGGGCAAGCCTGCCTCCAATTCCATTCAAAGTCATTCCCCCGCTCGCTGAGATAGATGCATATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp CAACAGAATAGCAGAGACAGGTGGTTCATCAACAGATACTTATTTCTCACAGTTTCACGGCCACGAGGATaGCCACAACCACGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: QQNSRDRWFINRYLFLTVSRPRG*PQPRGL
Trigger: CAGCCCTCGTGGTTGTGGTCATCCTCGTGGCCGTGA...AACTGTGAGAAATAAGTATCTGTTGATGAACCACCTGTCTCTGCTATTCTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp CAACAGAATAGCAGAGACAGGTGGTTCATCAACAGATACTTATTTCTCACAGTTGGCCTCAGGGACGAGTaGGTCCATGCCTTAAGGGCT +
Preference number: 4 (lower is better)
Translates to: QQNSRDRWFINRYLFLTVGLRDE*VHALRA
Trigger: AGCCCTTAAGGCATGGACGCACTCGTCCCTGAGGCC...AACTGTGAGAAATAAGTATCTGTTGATGAACCACCTGTCTCTGCTATTCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp AGCTGGACCGGCTTGGCTTTATTGATGCAGGTACACTTACTAGAGATTCTGAATCACAGTTCTGGAGGCTaGAAGCCCAAGATGAAGGTG +
Preference number: 4 (lower is better)
Translates to: SWTGLALLMQVHLLEILNHSSGG*KPKMKV
Trigger: CACCTTCATCTTGGGCTTCCAGCCTCCAGAACTGTG...ATTCAGAATCTCTAGTAAGTGTACCTGCATCAATAAAGCCAAGCCGGTCCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCAATAGCAGAGACAGGTaGTTCATCAACAGATACTTA +
Preference number: 4 (lower is better)
Translates to: HALRAAGCGCLLGPGETTNSRDR*FINRYL
Trigger: TAAGTATCTGTTGATGAACCACCTGTCTCTGCTATT...GGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CAACAGAATAGCAGAGACAGGTGGTTCATCAACAGATACTTATTTCTCACAGTTGGACCCCAGCAGGGATaGGATAAGGGGAACCGAGAC +
Preference number: 4 (lower is better)
Translates to: QQNSRDRWFINRYLFLTVGPQQG*DKGNRD
Trigger: GTCTCGGTTCCCCTTATCCCATCCCTGCTGGGGTCC...AACTGTGAGAAATAAGTATCTGTTGATGAACCACCTGTCTCTGCTATTCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp AGCTGGACCGGCTTGGCTTTATTGATGCAGGTACACTTACTAGAGATTCTGAATGAATCAGGACTGCCATaGCCATGGAAGAGTCCCTTG +
Preference number: 4 (lower is better)
Translates to: SWTGLALLMQVHLLEILNESGLP*PWKSPL
Trigger: CAAGGGACTCTTCCATGGCCATGGCAGTCCTGATTC...ATTCAGAATCTCTAGTAAGTGTACCTGCATCAATAAAGCCAAGCCGGTCCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp CAACAGAATAGCAGAGACAGGTGGTTCATCAACAGATACTTATTTCTCACAGTTCCCGCAGCACTGTGTTaGAGTCGAACATGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: QQNSRDRWFINRYLFLTVPAALC*SRTWPS
Trigger: AGACGGCCATGTTCGACTTCAACACAGTGCTGCGGG...AACTGTGAGAAATAAGTATCTGTTGATGAACCACCTGTCTCTGCTATTCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp AGCTGGACCGGCTTGGCTTTATTGATGCAGGTACACTTACTAGAGATTCTGAATAGTCAGGTACCTCTTTaGTCACTTTGCCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SWTGLALLMQVHLLEILNSQVPL*SLCQPG
Trigger: ACCTGGCTGGCAAAGTGACCAAAGAGGTACCTGACT...ATTCAGAATCTCTAGTAAGTGTACCTGCATCAATAAAGCCAAGCCGGTCCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp CAACAGAATAGCAGAGACAGGTGGTTCATCAACAGATACTTATTTCTCACAGTTCCATGCCTTAAGGGCTaGTGGTTGTGGGTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: QQNSRDRWFINRYLFLTVPCLKG*WLWVSA
Trigger: AGCAGACACCCACAACCAGCAGCCCTTAAGGCATGG...AACTGTGAGAAATAAGTATCTGTTGATGAACCACCTGTCTCTGCTATTCTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CAACAGAATAGCAGAGACAGGTGGTTCATCAACAGATACTTATTTCTCACAGTTTCAAACCTGCCGCTGTaGAGCAGAGCTTCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: QQNSRDRWFINRYLFLTVSNLPL*SRASGD
Trigger: GTCACCTGAAGCTCTGCTCCACAGCGGCAGGTTTGA...AACTGTGAGAAATAAGTATCTGTTGATGAACCACCTGTCTCTGCTATTCTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CAACAGAATAGCAGAGACAGGTGGTTCATCAACAGATACTTATTTCTCACAGTTAGGGACTCACTTGCCTaGCTTCCTGCGGCAAAGATG +
Preference number: 4 (lower is better)
Translates to: QQNSRDRWFINRYLFLTVRDSLA*LPAAKM
Trigger: CATCTTTGCCGCAGGAAGCCAGGCAAGTGAGTCCCT...AACTGTGAGAAATAAGTATCTGTTGATGAACCACCTGTCTCTGCTATTCTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CAACAGAATAGCAGAGACAGGTGGTTCATCAACAGATACTTATTTCTCACAGTTGGCAGCTGCAAGGCCTaGGGACATTTAACGCACGTA +
Preference number: 4 (lower is better)
Translates to: QQNSRDRWFINRYLFLTVGSCKA*GHLTHV
Trigger: TACGTGCGTTAAATGTCCCCAGGCCTTGCAGCTGCC...AACTGTGAGAAATAAGTATCTGTTGATGAACCACCTGTCTCTGCTATTCTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CAACAGAATAGCAGAGACAGGTGGTTCATCAACAGATACTTATTTCTCACAGTTTGCCTTAAGGGCTGCTaGTTGTGGGTGTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: QQNSRDRWFINRYLFLTVCLKGC*LWVSAW
Trigger: CCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCA...AACTGTGAGAAATAAGTATCTGTTGATGAACCACCTGTCTCTGCTATTCTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp AGCTGGACCGGCTTGGCTTTATTGATGCAGGTACACTTACTAGAGATTCTGAATGTCACTATCAAAAGGTaGGGTCCGGGGATTAGGTTA +
Preference number: 4 (lower is better)
Translates to: SWTGLALLMQVHLLEILNVTIKR*GPGIRL
Trigger: TAACCTAATCCCCGGACCCCACCTTTTGATAGTGAC...ATTCAGAATCTCTAGTAAGTGTACCTGCATCAATAAAGCCAAGCCGGTCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp AGCTGGACCGGCTTGGCTTTATTGATGCAGGTACACTTACTAGAGATTCTGAATTGGTTGCAACCTCCATaGTTCCCTAGAGCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: SWTGLALLMQVHLLEILNWLQPP*FPRAVF
Trigger: AAAAACAGCTCTAGGGAATCATGGAGGTTGCAACCA...ATTCAGAATCTCTAGTAAGTGTACCTGCATCAATAAAGCCAAGCCGGTCCAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp CAACAGAATAGCAGAGACAGGTGGTTCATCAACAGATACTTATTTCTCACAGTTGCCAGGTCACCTCTCTaGATTTTGTGGTTGCAACCT +
Preference number: 4 (lower is better)
Translates to: QQNSRDRWFINRYLFLTVARSPL*ILWLQP
Trigger: AGGTTGCAACCACAAAATTCAGAGAGGTGACCTGGC...AACTGTGAGAAATAAGTATCTGTTGATGAACCACCTGTCTCTGCTATTCTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp AGCTGGACCGGCTTGGCTTTATTGATGCAGGTACACTTACTAGAGATTCTGAATTGCCTAGGATTTGTCTaGCTCCTGTCACTATCAAAA +
Preference number: 4 (lower is better)
Translates to: SWTGLALLMQVHLLEILNCLGFV*LLSLSK
Trigger: TTTTGATAGTGACAGGAGGCAGACAAATCCTAGGCA...ATTCAGAATCTCTAGTAAGTGTACCTGCATCAATAAAGCCAAGCCGGTCCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR GCA 90 bp CAACAGAATAGCAGAGACAGGTGGTTCATCAACAGATACTTATTTCTCACAGTTCCTGAGCTGAAAGGCTaGATGGCAGGTGACCATTAT +
Preference number: 4 (lower is better)
Translates to: QQNSRDRWFINRYLFLTVPELKG*MAGDHY
Trigger: ATAATGGTCACCTGCCATGCAGCCTTTCAGCTCAGG...AACTGTGAGAAATAAGTATCTGTTGATGAACCACCTGTCTCTGCTATTCTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR TCA 90 bp CAACAGAATAGCAGAGACAGGTGGTTCATCAACAGATACTTATTTCTCACAGTTGTCAAGTACAAAGCCTaGCTCAGGAAGGAACCACTT +
Preference number: 4 (lower is better)
Translates to: QQNSRDRWFINRYLFLTVVKYKA*LRKEPL
Trigger: AAGTGGTTCCTTCCTGAGTCAGGCTTTGTACTTGAC...AACTGTGAGAAATAAGTATCTGTTGATGAACCACCTGTCTCTGCTATTCTGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CAACAGAATAGCAGAGACAGGTGGTTCATCAACAGATACTTATTTCTCACAGTTGCAACACATAAAGTTTaGGGGAATGCAGACATTCAG +
Preference number: 4 (lower is better)
Translates to: QQNSRDRWFINRYLFLTVATHKV*GNADIQ
Trigger: CTGAATGTCTGCATTCCCCCAAACTTTATGTGTTGC...AACTGTGAGAAATAAGTATCTGTTGATGAACCACCTGTCTCTGCTATTCTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CCA 90 bp CAACAGAATAGCAGAGACAGGTGGTTCATCAACAGATACTTATTTCTCACAGTTCTCTACCAGTTTACTTaGTTGAATGAAATCTGGATT +
Preference number: 4 (lower is better)
Translates to: QQNSRDRWFINRYLFLTVLYQFT*LNEIWI
Trigger: AATCCAGATTTCATTCAACCAAGTAAACTGGTAGAG...AACTGTGAGAAATAAGTATCTGTTGATGAACCACCTGTCTCTGCTATTCTGTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS TCA 90 bp CGTCCTGGGCCCGGCCGTCCAGGAAGAAGGCCGAGGCCGCGCGGGTaGCCAGCAGGGCGGCTCGGCGCTCACCTTGGGGTTCGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: RPGPGRPGRRPRPRG*PAGRLGAHLGVRCR
Trigger: CCGGCAGCGAACCCCAAGGTGAGCGCCGAGCCGCCCTGCTGGTCACCCGCGCGGCCTCGGCCTTCTTCCTGGACGGCCGGGCCCAGGACG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS GCA 90 bp CAGCGCGCAGAAGCCGCGCAGAGCCAGGAGAGGTGCGCGGTCCCCTaGACGGTCCCCCGCAGGGTCCTCAGGGCGTGCGGGCCGCAGCAG +
Preference number: 5 (lower is better)
Translates to: QRAEAAQSQERCAVP*TVPRRVLRACGPQQ
Trigger: CTGCTGCGGCCCGCACGCCCTGAGGACCCTGCGGGGGACCGTGCAGGGGACCGCGCACCTCTCCTGGCTCTGCGCGGCTTCTGCGCGCTG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS CCA 90 bp CTCTGCGGCCTCCCTCCGGCCCTGCGCTCTGGACGGCCCGGCGCGTaGAGATCGCTGCAGCATCCCACGGGCCTCCTCCCGCAGCACCAC +
Preference number: 5 (lower is better)
Translates to: LCGLPPALRSGRPGA*RSLQHPTGLLPQHH
Trigger: GTGGTGCTGCGGGAGGAGGCCCGTGGGATGCTGCAGCGATCTCCACGCGCCGGGCCGTCCAGAGCGCAGGGCCGGAGGGAGGCCGCAGAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000637179.1
CDS CCA 90 bp CTTCGTGACGCCCGCGGGCCAGCAGACCTGCCAGCAGGTGCAGGATaGCGGCGGGGTGGTCCGGGCAGAGGGCGCCGAGGAAGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: LRDARGPADLPAGAG*RRGGPGRGRRGRQR
Trigger: CCTCTGCCTTCCTCGGCGCCCTCTGCCCGGACCACCCCGCCGCCATCCTGCACCTGCTGGCAGGTCTGCTGGCCCGCGGGCGTCACGAAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS CCA 90 bp GGGGCTGCCTGGGGCCTCCGGGATAGGGCCACCAGCAGGGCCTTGTaGGTCTCCTCCAGGCGGCCCAGGCGGTACAGGGCATCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: GAAWGLRDRATSRAL*VSSRRPRRYRASAA
Trigger: GGCGGCTGATGCCCTGTACCGCCTGGGCCGCCTGGAGGAGACCCACAAGGCCCTGCTGGTGGCCCTATCCCGGAGGCCCCAGGCAGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000637179.1
CDS CCA 90 bp GTAGGCGATGGCCTCCTTGGTGTGAACCCTGCCGTCGGCCCCGCCTaGCCGTGCCCGCAGGATGGCCAGGGCCCTGGCGTGGCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: VGDGLLGVNPAVGPA*PCPQDGQGPGVAVA
Trigger: GGCCACTGCCACGCCAGGGCCCTGGCCATCCTGCGGGCACGGCCAGGCGGGGCCGACGGCAGGGTTCACACCAAGGAGGCCATCGCCTAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000637179.1
CDS GCA 90 bp GCCCGGACGCGCTCCTGGTCCTGGACAGAGAACACGGCCTGGAACTaGCTCCGCGCCCCAGAGGGGCTCTCGCGGAAGGCCTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: ARTRSWSWTENTAWN*LRAPEGLSRKASCR
Trigger: CCTGCAGGAGGCCTTCCGCGAGAGCCCCTCTGGGGCGCGGAGGCAGTTCCAGGCCGTGTTCTCTGTCCAGGACCAGGAGCGCGTCCGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS GCA 90 bp ACTACCGTCTGGAAGTCCTCCATGGCGCGCCGCGAGTCCCCGGCGTaGAGCGCGCAGAAGCCGCGCAGAGCCAGGAGAGGTGCGCGGTCC +
Preference number: 5 (lower is better)
Translates to: TTVWKSSMARRESPA*SAQKPRRARRGARS
Trigger: GGACCGCGCACCTCTCCTGGCTCTGCGCGGCTTCTGCGCGCTGCACGCCGGGGACTCGCGGCGCGCCATGGAGGACTTCCAGACGGTAGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS GCA 90 bp GCCGCCGCCTGGGCAAGGCTCTGCCGCTCCGAGGCCTCCAGGAGATaGAGCAGGCAGCTGAGATCCGGGGCATCCACCTCGGCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: AAAWARLCRSEASRR*SRQLRSGASTSARL
Trigger: GAGCCTGGCCGAGGTGGATGCCCCGGATCTCAGCTGCCTGCTGCATCTCCTGGAGGCCTCGGAGCGGCAGAGCCTTGCCCAGGCGGCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000629910.1
ENST00000637179.1
CDS CCA 90 bp CTGCACAGGCTGTTCTGGGCCAAGGAGGGCGCCAGCTTCAGGGCCTaGGCAAAGGCCCCTGCGGCCGCCGCCTCATCCCCCAGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: LHRLFWAKEGASFRA*AKAPAAAASSPRLS
Trigger: GCTGAGCCTGGGGGATGAGGCGGCGGCCGCAGGGGCCTTTGCCCAGGCCCTGAAGCTGGCGCCCTCCTTGGCCCAGAACAGCCTGTGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000629910.1
ENST00000637179.1
CDS GCA 90 bp GGCGCCGAGGAAGGCAGAGGCCAGCGACCCTGTCAGGGAGACCACTaGCATGCCGTCCCAGTGGATGGCGGGGATCTGGCTGTCCCCGCG +
Preference number: 5 (lower is better)
Translates to: GAEEGRGQRPCQGDH*HAVPVDGGDLAVPA
Trigger: CGCGGGGACAGCCAGATCCCCGCCATCCACTGGGACGGCATGGCAGTGGTCTCCCTGACAGGGTCGCTGGCCTCTGCCTTCCTCGGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS CCA 90 bp GTCAGGGAGACCACTGCCATGCCGTCCCAGTGGATGGCGGGGATCTaGCTGTCCCCGCGGCACCAGGACTCCAGGGTGGCCACCACCGCC +
Preference number: 5 (lower is better)
Translates to: VRETTAMPSQWMAGI*LSPRHQDSRVATTA
Trigger: GGCGGTGGTGGCCACCCTGGAGTCCTGGTGCCGCGGGGACAGCCAGATCCCCGCCATCCACTGGGACGGCATGGCAGTGGTCTCCCTGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS CCA 90 bp AGCAGGGCGGCTCGGCGCTCACCTTGGGGTTCGCTGCCGGTGGGATaGGCCTCGAGGGCCCGGCTGCATGCTGCCAGGCAGTCCTCAAAC +
Preference number: 5 (lower is better)
Translates to: SRAARRSPWGSLPVG*ASRARLHAARQSSN
Trigger: GTTTGAGGACTGCCTGGCAGCATGCAGCCGGGCCCTCGAGGCCCATCCCACCGGCAGCGAACCCCAAGGTGAGCGCCGAGCCGCCCTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS CCA 90 bp GAGGGGCTCTCGCGGAAGGCCTCCTGCAGGTTCCAAAACACGTCCTaGGCCCGGCCGTCCAGGAAGAAGGCCGAGGCCGCGCGGGTGACC +
Preference number: 5 (lower is better)
Translates to: EGLSRKASCRFQNTS*ARPSRKKAEAARVT
Trigger: GGTCACCCGCGCGGCCTCGGCCTTCTTCCTGGACGGCCGGGCCCAGGACGTGTTTTGGAACCTGCAGGAGGCCTTCCGCGAGAGCCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS CCA 90 bp CTCCTCAGCTGCAGCAGGGCCAGTCGTGCCAGCACAGGGGCTGCCTaGGGCCTCCGGGATAGGGCCACCAGCAGGGCCTTGTGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: LLSCSRASRASTGAA*GLRDRATSRALWVS
Trigger: GGAGACCCACAAGGCCCTGCTGGTGGCCCTATCCCGGAGGCCCCAGGCAGCCCCTGTGCTGGCACGACTGGCCCTGCTGCAGCTGAGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000637179.1
CDS GCA 90 bp CGAGGAAGGCAGAGGCCAGCGACCCTGTCAGGGAGACCACTGCCATaGCGTCCCAGTGGATGGCGGGGATCTGGCTGTCCCCGCGGCACC +
Preference number: 5 (lower is better)
Translates to: RGRQRPATLSGRPLP*RPSGWRGSGCPRGT
Trigger: GGTGCCGCGGGGACAGCCAGATCCCCGCCATCCACTGGGACGGCATGGCAGTGGTCTCCCTGACAGGGTCGCTGGCCTCTGCCTTCCTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS GCA 90 bp TGCCCGCGGAGAAGGAACATGCGTGCAGTGGGGGCCCGGCCTGGCTaGCTGCACAGGCTGTTCTGGGCCAAGGAGGGCGCCAGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: CPRRRNMRAVGARPG*LHRLFWAKEGASFR
Trigger: CCTGAAGCTGGCGCCCTCCTTGGCCCAGAACAGCCTGTGCAGGCAGCCAGGCCGGGCCCCCACTGCACGCATGTTCCTTCTCCGCGGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000629910.1
ENST00000637179.1
CDS CCA 90 bp CCAGCGACCCTGTCAGGGAGACCACTGCCATGCCGTCCCAGTGGATaGCGGGGATCTGGCTGTCCCCGCGGCACCAGGACTCCAGGGTGG +
Preference number: 5 (lower is better)
Translates to: PATLSGRPLPCRPSG*RGSGCPRGTRTPGW
Trigger: CCACCCTGGAGTCCTGGTGCCGCGGGGACAGCCAGATCCCCGCCATCCACTGGGACGGCATGGCAGTGGTCTCCCTGACAGGGTCGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS CCA 90 bp GAGGCCAGCGACCCTGTCAGGGAGACCACTGCCATGCCGTCCCAGTaGATGGCGGGGATCTGGCTGTCCCCGCGGCACCAGGACTCCAGG +
Preference number: 5 (lower is better)
Translates to: EASDPVRETTAMPSQ*MAGIWLSPRHQDSR
Trigger: CCTGGAGTCCTGGTGCCGCGGGGACAGCCAGATCCCCGCCATCCACTGGGACGGCATGGCAGTGGTCTCCCTGACAGGGTCGCTGGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS CCA 90 bp GCACTGCCCGCGGAGAAGGAACATGCGTGCAGTGGGGGCCCGGCCTaGCTGCCTGCACAGGCTGTTCTGGGCCAAGGAGGGCGCCAGCTT +
Preference number: 5 (lower is better)
Translates to: ALPAEKEHACSGGPA*LPAQAVLGQGGRQL
Trigger: AAGCTGGCGCCCTCCTTGGCCCAGAACAGCCTGTGCAGGCAGCCAGGCCGGGCCCCCACTGCACGCATGTTCCTTCTCCGCGGGCAGTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000629910.1
ENST00000637179.1
CDS CCA 90 bp GCTCCTCCAGGCAGCACTGCCCGCGGAGAAGGAACATGCGTGCAGTaGGGGCCCGGCCTGGCTGCCTGCACAGGCTGTTCTGGGCCAAGG +
Preference number: 5 (lower is better)
Translates to: APPGSTARGEGTCVQ*GPGLAACTGCSGPR
Trigger: CCTTGGCCCAGAACAGCCTGTGCAGGCAGCCAGGCCGGGCCCCCACTGCACGCATGTTCCTTCTCCGCGGGCAGTGCTGCCTGGAGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000629910.1
ENST00000637179.1
CDS-3UTR CAA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGGGCTCGGCGCTCACCTaGGGGTTCGCTGCCGGTGGG +
Preference number: 5 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKGSALT*GFAAGG
Trigger: CCCACCGGCAGCGAACCCCAAGGTGAGCGCCGAGCC...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS TCA 90 bp TCCCTTCTTGAGCTGGAGCAGGCCCAGCCGGGCCCGGGCTGCCTCTaGCGTTGGGGCACGGTGCAGGGCTTTTTCCAGGTGGGTGCCAGC +
Preference number: 5 (lower is better)
Translates to: SLLELEQAQPGPGCL*RWGTVQGFFQVGAS
Trigger: GCTGGCACCCACCTGGAAAAAGCCCTGCACCGTGCCCCAACGTCAGAGGCAGCCCGGGCCCGGCTGGGCCTGCTCCAGCTCAAGAAGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000629910.1
ENST00000637179.1
CDS GCA 90 bp TGCCGCTGTGGAGCAGAGCTTCAGGTGACAGGGTGTCACTCCGGGTaGCCCTGGGGTCCAGAGCCGCCAGGAGTCGCTGGCCACCGGTCT +
Preference number: 5 (lower is better)
Translates to: CRCGAELQVTGCHSG*PWGPEPPGVAGHRS
Trigger: AGACCGGTGGCCAGCGACTCCTGGCGGCTCTGGACCCCAGGGGCACCCGGAGTGACACCCTGTCACCTGAAGCTCTGCTCCACAGCGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS GCA 90 bp GGGTTCGCTGCCGGTGGGATGGGCCTCGAGGGCCCGGCTGCATGCTaGCAGGCAGTCCTCAAACCTGCCGCTGTGGAGCAGAGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: GFAAGGMGLEGPAAC*QAVLKPAAVEQSFR
Trigger: CCTGAAGCTCTGCTCCACAGCGGCAGGTTTGAGGACTGCCTGGCAGCATGCAGCCGGGCCCTCGAGGCCCATCCCACCGGCAGCGAACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS GCA 90 bp CACCTTGGGGTTCGCTGCCGGTGGGATGGGCCTCGAGGGCCCGGCTaGATGCTGCCAGGCAGTCCTCAAACCTGCCGCTGTGGAGCAGAG +
Preference number: 5 (lower is better)
Translates to: HLGVRCRWDGPRGPG*MLPGSPQTCRCGAE
Trigger: CTCTGCTCCACAGCGGCAGGTTTGAGGACTGCCTGGCAGCATGCAGCCGGGCCCTCGAGGCCCATCCCACCGGCAGCGAACCCCAAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CAA 90 bp GAGAGGGCAGGGCAGGTACCTCCCCGATTTAGGGAGCTGGGTACACCCCTGGGCGCCACCAGCAGGGCCTaGTGGGTCTCCTCCAGGCGG +
Preference number: 5 (lower is better)
Translates to: ERAGQVPPRFRELGTPLGATSRA*WVSSRR
Trigger: CCGCCTGGAGGAGACCCACAAGGCCCTGCTGGTGGC...GCCCAGGGGTGTACCCAGCTCCCTAAATCGGGGAGGTACCTGCCCTGCCCTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS GCA 90 bp GGGCCTCGAGGGCCCGGCTGCATGCTGCCAGGCAGTCCTCAAACCTaGCGCTGTGGAGCAGAGCTTCAGGTGACAGGGTGTCACTCCGGG +
Preference number: 5 (lower is better)
Translates to: GPRGPGCMLPGSPQT*RCGAELQVTGCHSG
Trigger: CCCGGAGTGACACCCTGTCACCTGAAGCTCTGCTCCACAGCGGCAGGTTTGAGGACTGCCTGGCAGCATGCAGCCGGGCCCTCGAGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS GCA 90 bp TTGGGGTTCGCTGCCGGTGGGATGGGCCTCGAGGGCCCGGCTGCATaGTGCCAGGCAGTCCTCAAACCTGCCGCTGTGGAGCAGAGCTTC +
Preference number: 5 (lower is better)
Translates to: LGFAAGGMGLEGPAA*CQAVLKPAAVEQSF
Trigger: GAAGCTCTGCTCCACAGCGGCAGGTTTGAGGACTGCCTGGCAGCATGCAGCCGGGCCCTCGAGGCCCATCCCACCGGCAGCGAACCCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CAA 90 bp GAGAGGGCAGGGCAGGTACCTCCCCGATTTAGGGAGCTGGGTACACCCCTGGGCGGCGTGGCAGTGGCCTaGAAGCAGCTGCCGGTCCTC +
Preference number: 5 (lower is better)
Translates to: ERAGQVPPRFRELGTPLGGVAVA*KQLPVL
Trigger: GAGGACCGGCAGCTGCTTCAAGGCCACTGCCACGCC...GCCCAGGGGTGTACCCAGCTCCCTAAATCGGGGAGGTACCTGCCCTGCCCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS GCA 90 bp GCCGCAGCTCCAGGACTTGCTGTGCATGAGAGTCCAGCAGGGCGCTaGAGCGTTGCACCACTTCTTCGTGACGCCCGCGGGCCAGCAGAC +
Preference number: 5 (lower is better)
Translates to: AAAPGLAVHESPAGR*SVAPLLRDARGPAD
Trigger: GTCTGCTGGCCCGCGGGCGTCACGAAGAAGTGGTGCAACGCTGCAGCGCCCTGCTGGACTCTCATGCACAGCAAGTCCTGGAGCTGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS GCA 90 bp TGCAGCAGGCAGCTGAGATCCGGGGCATCCACCTCGGCCAGGCTCTaGAGGTCCCTTGCAGCCCCTGGCACGTCTCCCTTCTTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: CSRQLRSGASTSARL*RSLAAPGTSPFLSW
Trigger: CCAGCTCAAGAAGGGAGACGTGCCAGGGGCTGCAAGGGACCTGCAGAGCCTGGCCGAGGTGGATGCCCCGGATCTCAGCTGCCTGCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000629910.1
ENST00000637179.1
CDS CCA 90 bp AGGGCCCGGCTGCATGCTGCCAGGCAGTCCTCAAACCTGCCGCTGTaGAGCAGAGCTTCAGGTGACAGGGTGTCACTCCGGGTGCCCCTG +
Preference number: 5 (lower is better)
Translates to: RARLHAARQSSNLPL*SRASGDRVSLRVPL
Trigger: CAGGGGCACCCGGAGTGACACCCTGTCACCTGAAGCTCTGCTCCACAGCGGCAGGTTTGAGGACTGCCTGGCAGCATGCAGCCGGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS CCA 90 bp TTGCCTGGCTTCCTGCGGCAAAGATGGCCAGAGACAGGTAGGCGATaGCCTCCTTGGTGTGAACCCTGCCGTCGGCCCCGCCTGGCCGTG +
Preference number: 5 (lower is better)
Translates to: LPGFLRQRWPETGRR*PPWCEPCRRPRLAV
Trigger: CACGGCCAGGCGGGGCCGACGGCAGGGTTCACACCAAGGAGGCCATCGCCTACCTGTCTCTGGCCATCTTTGCCGCAGGAAGCCAGGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000629910.1
ENST00000637179.1
CDS-3UTR CAA 90 bp AGCTGTCCCCTGTCCTTCCCAAGGCAGAGGTGTGAGGCTGGCTGTCCAACACTGCAGCGCCTGCCTGGGTaGCCCTGCGTCCAGGAGGGT +
Preference number: 5 (lower is better)
Translates to: SCPLSFPRQRCEAGCPTLQRLPG*PCVQEG
Trigger: ACCCTCCTGGACGCAGGGCAACCCAGGCAGGCGCTG...CAGTGTTGGACAGCCAGCCTCACACCTCTGCCTTGGGAAGGACAGGGGACAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS GCA 90 bp AGCTGGTCTAGGGCCAGGTGCACCAACGCCCGTCCACACAGTGCCTaGACGTTCCCCGGCTCAGCCCGCAGCACTGTGTTGAAGTCGAAC +
Preference number: 5 (lower is better)
Translates to: SWSRARCTNARPHSA*TFPGSARSTVLKSN
Trigger: GTTCGACTTCAACACAGTGCTGCGGGCTGAGCCGGGGAACGTGCAGGCACTGTGTGGACGGGCGTTGGTGCACCTGGCCCTAGACCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000629910.1
ENST00000637179.1
CDS CCA 90 bp GGCCTTGAAGCAGCTGCCGGTCCTCGTGGCAGAAGACGTCCAGGGTaGGCTGGAGGCAGGCGGTGTCACCAGACTGGACCAGCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: GLEAAAGPRGRRRPG*AGGRRCHQTGPASS
Trigger: TGAAGAAGCTGGTCCAGTCTGGTGACACCGCCTGCCTCCAGCCCACCCTGGACGTCTTCTGCCACGAGGACCGGCAGCTGCTTCAAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000637179.1
CDS-3UTR CAA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGGCCCGCAGCACTGTGTaGAAGTCGAACATGGCCGTC +
Preference number: 5 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKARSTV*KSNMAV
Trigger: GACGGCCATGTTCGACTTCAACACAGTGCTGCGGGC...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CAA 90 bp GATCCTGAGGTCCAGGAGGAGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTGAGTCCTCTGCCCGCCTaGGGAGGTCACCATCCCCCA +
Preference number: 5 (lower is better)
Translates to: DPEVQEEPQRGWHLHSALSPLPA*GGHHPP
Trigger: TGGGGGATGGTGACCTCCCAAGGCGGGCAGAGGACT...CAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTCCTGGACCTCAGGATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CAA 90 bp CAGCCTTGCACGGATGGATGGGGCAGGACATCCCAGGCGAGGAGGACGGTAGGACCGCAGCTCCAGGACTaGCTGTGCATGAGAGTCCAG +
Preference number: 5 (lower is better)
Translates to: QPCTDGWGRTSQARRTVGPQLQD*LCMRVQ
Trigger: CTGGACTCTCATGCACAGCAAGTCCTGGAGCTGCGG...TCCTACCGTCCTCCTCGCCTGGGATGTCCTGCCCCATCCATCCGTGCAAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CAA 90 bp GATCCTGAGGTCCAGGAGGAGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTGGAAGTCAGGCAGGGCTaGGGGGCACGTTTTGCACCG +
Preference number: 5 (lower is better)
Translates to: DPEVQEEPQRGWHLHSALEVRQG*GARFAP
Trigger: CGGTGCAAAACGTGCCCCCAAGCCCTGCCTGACTTC...CAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTCCTGGACCTCAGGATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS TCA 90 bp TGTCTGCCAGGAGGAGGTGCCAGTGCGGTTGCCCTGAGTCGATTTTaGTCAGCGCCTCCCCCACAGCAAGGAGGCCCTGGGTGTCCTTGT +
Preference number: 5 (lower is better)
Translates to: CLPGGGASAVALSRF*SAPPPQQGGPGCPC
Trigger: ACAAGGACACCCAGGGCCTCCTTGCTGTGGGGGAGGCGCTGATCAAAATCGACTCAGGGCAACCGCACTGGCACCTCCTCCTGGCAGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000629910.1
ENST00000637179.1
CDS-3UTR CAA 90 bp AGCTGTCCCCTGTCCTTCCCAAGGCAGAGGTGTGAGGCTGGCTGTCCAACACTGCAGGGCGCTGCAGCGTaGCACCACTTCTTCGTGACG +
Preference number: 5 (lower is better)
Translates to: SCPLSFPRQRCEAGCPTLQGAAA*HHFFVT
Trigger: CGTCACGAAGAAGTGGTGCAACGCTGCAGCGCCCTG...CAGTGTTGGACAGCCAGCCTCACACCTCTGCCTTGGGAAGGACAGGGGACAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CAA 90 bp TACCTGCCGCAGGAGGTGGCCCACCCACTCAGCCTGCCTGGGCCACACCTGGCTGTGTTTGTTGAGTCCTaGAGCACACGGGTGAAGACA +
Preference number: 5 (lower is better)
Translates to: YLPQEVAHPLSLPGPHLAVFVES*STRVKT
Trigger: TGTCTTCACCCGTGTGCTCAAGGACTCAACAAACAC...AGCCAGGTGTGGCCCAGGCAGGCTGAGTGGGTGGGCCACCTCCTGCGGCAGGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CAA 90 bp GGAGCCTGGGGACTGTGCTCATCAGGGCCCCTCGGTGGTCCCTCTGCTTGGAAGTGTTGGCCCACAGTGTaGTTGGGGGAGCTTCACAGT +
Preference number: 5 (lower is better)
Translates to: GAWGLCSSGPLGGPSAWKCWPTV*LGELHS
Trigger: ACTGTGAAGCTCCCCCAACAACACTGTGGGCCAACA...CTTCCAAGCAGAGGGACCACCGAGGGGCCCTGATGAGCACAGTCCCCAGGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS TCA 90 bp TGCCATGAGAATGTCTGCCAGGAGGAGGTGCCAGTGCGGTTGCCCTaGGTCGATTTTGATCAGCGCCTCCCCCACAGCAAGGAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: CHENVCQEEVPVRLP*VDFDQRLPHSKEAL
Trigger: CAGGGCCTCCTTGCTGTGGGGGAGGCGCTGATCAAAATCGACTCAGGGCAACCGCACTGGCACCTCCTCCTGGCAGACATTCTCATGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000629910.1
ENST00000637179.1
CDS GCA 90 bp CCCTGTGCCATGAGAATGTCTGCCAGGAGGAGGTGCCAGTGCGGTTaGCCTGAGTCGATTTTGATCAGCGCCTCCCCCACAGCAAGGAGG +
Preference number: 5 (lower is better)
Translates to: PCAMRMSARRRCQCG*PESILISASPTARR
Trigger: CCTCCTTGCTGTGGGGGAGGCGCTGATCAAAATCGACTCAGGGCAACCGCACTGGCACCTCCTCCTGGCAGACATTCTCATGGCACAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000629910.1
ENST00000637179.1
CDS-3UTR CAA 90 bp TGGCCCAAGGCTCAGGGTCCAAGCAAAACGCAGCTTCACACCCAGGGAGGGGCTTGCCCTGAGTCGATTTaGATCAGCGCCTCCCCCACA +
Preference number: 5 (lower is better)
Translates to: WPKAQGPSKTQLHTQGGACPESI*ISASPT
Trigger: TGTGGGGGAGGCGCTGATCAAAATCGACTCAGGGCA...AGCCCCTCCCTGGGTGTGAAGCTGCGTTTTGCTTGGACCCTGAGCCTTGGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CAA 90 bp TGGCCCAAGGCTCAGGGTCCAAGCAAAACGCAGCTTCACACCCAGGGAGGGGCTCCTGACCCGAGGAACTaGCGTGTCCCTGAACTTAGC +
Preference number: 5 (lower is better)
Translates to: WPKAQGPSKTQLHTQGGAPDPRN*RVPELS
Trigger: GCTAAGTTCAGGGACACGCAAGTTCCTCGGGTCAGG...AGCCCCTCCCTGGGTGTGAAGCTGCGTTTTGCTTGGACCCTGAGCCTTGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CAA 90 bp GAGAGGGCAGGGCAGGTACCTCCCCGATTTAGGGAGCTGGGTACACCCCTGGGCGTTGTGGGTGTCTGCTaGGTCCTGGAGAAACTACCT +
Preference number: 5 (lower is better)
Translates to: ERAGQVPPRFRELGTPLGVVGVC*VLEKLP
Trigger: AGGTAGTTTCTCCAGGACCAAGCAGACACCCACAAC...GCCCAGGGGTGTACCCAGCTCCCTAAATCGGGGAGGTACCTGCCCTGCCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CAA 90 bp TCCCCGAGGTACTCAAGGTGGGAGGCACTGACCCTTTACCCAGACCCCTGTGGCCTTAAGGGCTGCTGGTaGTGGGTGTCTGCTTGGTCC +
Preference number: 5 (lower is better)
Translates to: SPRYSRWEALTLYPDPCGLKGCW*WVSAWS
Trigger: GGACCAAGCAGACACCCACAACCAGCAGCCCTTAAG...GCCACAGGGGTCTGGGTAAAGGGTCAGTGCCTCCCACCTTGAGTACCTCGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CAA 90 bp TGGCCCAAGGCTCAGGGTCCAAGCAAAACGCAGCTTCACACCCAGGGAGGGGCTGGCTTTAAACTGTCTTaGGCTCGGAGGTGGGGTTTC +
Preference number: 5 (lower is better)
Translates to: WPKAQGPSKTQLHTQGGAGFKLS*ARRWGF
Trigger: GAAACCCCACCTCCGAGCCAAAGACAGTTTAAAGCC...AGCCCCTCCCTGGGTGTGAAGCTGCGTTTTGCTTGGACCCTGAGCCTTGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CAA 90 bp TGGCCCAAGGCTCAGGGTCCAAGCAAAACGCAGCTTCACACCCAGGGAGGGGCTAGCGGGGGAATGACTTaGAATGGAATTGGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: WPKAQGPSKTQLHTQGGASGGMT*NGIGGR
Trigger: CCTGCCTCCAATTCCATTCAAAGTCATTCCCCCGCT...AGCCCCTCCCTGGGTGTGAAGCTGCGTTTTGCTTGGACCCTGAGCCTTGGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CAA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTAGGCACGTCTCCCTTCTaGAGCTGGAGCAGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLGTSPF*SWSRPS
Trigger: GCTGGGCCTGCTCCAGCTCAAGAAGGGAGACGTGCC...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CAA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTAACACTCGTCTGCAGCTaGGAGGCTGAGCCGGCTGTG +
Preference number: 5 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLTLVCS*EAEPAV
Trigger: CACAGCCGGCTCAGCCTCCAAGCTGCAGACGAGTGT...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CAA 90 bp GATCCTGAGGTCCAGGAGGAGCCTCAGCGGGGCTGGCATCTACACTCAGCCTTGCAGTTTAACTCTGAGTaGTGTGACTGCTGTGTGGCT +
Preference number: 5 (lower is better)
Translates to: DPEVQEEPQRGWHLHSALQFNSE*CDCCVA
Trigger: AGCCACACAGCAGTCACACAACTCAGAGTTAAACTG...CAAGGCTGAGTGTAGATGCCAGCCCCGCTGAGGCTCCTCCTGGACCTCAGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CAA 90 bp CATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCGGAAGATGGATCAAATaGGTGCCTGCGCTGGGGAAC +
Preference number: 5 (lower is better)
Translates to: HALRAAGCGCLLGPGETTGRWIK*VPALGN
Trigger: GTTCCCCAGCGCAGGCACCAATTTGATCCATCTTCC...GGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CAA 90 bp CAGCCTTGCACGGATGGATGGGGCAGGACATCCCAGGCGAGGAGGACGGTAGGATGCTTGTGTTATAGCTaGTACCCATGTATGGCAGTT +
Preference number: 5 (lower is better)
Translates to: QPCTDGWGRTSQARRTVGCLCYS*YPCMAV
Trigger: AACTGCCATACATGGGTACAAGCTATAACACAAGCA...TCCTACCGTCCTCCTCGCCTGGGATGTCCTGCCCCATCCATCCGTGCAAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CAA 90 bp AGCTGGACCGGCTTGGCTTTATTGATGCAGGTACACTTACTAGAGATTCTGAATGGGCTGCCTCTGACGTaGGGGCACGGTGCAGGGCTT +
Preference number: 5 (lower is better)
Translates to: SWTGLALLMQVHLLEILNGLPLT*GHGAGL
Trigger: AAGCCCTGCACCGTGCCCCAACGTCAGAGGCAGCCC...ATTCAGAATCTCTAGTAAGTGTACCTGCATCAATAAAGCCAAGCCGGTCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CAA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTACATCTACACTCAGCCTaGCACGGATGGATGGGGCAG +
Preference number: 5 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLHLHSA*HGWMGQ
Trigger: CTGCCCCATCCATCCGTGCAAGGCTGAGTGTAGATG...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CAA 90 bp TCTGCCTCAGTGCCGACTGGCCCACCTGACCCGAGGAACTTGCGTGTCCCTGAAAGATTGATCGCAGAGTaGAACAACAGAGAATGTGTG +
Preference number: 5 (lower is better)
Translates to: SASVPTGPPDPRNLRVPERLIAE*NNRECV
Trigger: CACACATTCTCTGTTGTTCAACTCTGCGATCAATCT...TTCAGGGACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGCACTGAGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CAA 90 bp TCTGCCTCAGTGCCGACTGGCCCACCTGACCCGAGGAACTTGCGTGTCCCTGAATGGTCAGAGGACAGCTaGGTTTTATACATTTTAGGG +
Preference number: 5 (lower is better)
Translates to: SASVPTGPPDPRNLRVPEWSEDS*VLYILG
Trigger: CCCTAAAATGTATAAAACCAAGCTGTCCTCTGACCA...TTCAGGGACACGCAAGTTCCTCGGGTCAGGTGGGCCAGTCGGCACTGAGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CAA 90 bp AGCTGGACCGGCTTGGCTTTATTGATGCAGGTACACTTACTAGAGATTCTGAATCACCTGGCCCCGACATaGGAGCAGGCCCTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: SWTGLALLMQVHLLEILNHLAPT*EQALLL
Trigger: CAGCAGAAGGGCCTGCTCCAATGTCGGGGCCAGGTG...ATTCAGAATCTCTAGTAAGTGTACCTGCATCAATAAAGCCAAGCCGGTCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CAA 90 bp AGCTGGACCGGCTTGGCTTTATTGATGCAGGTACACTTACTAGAGATTCTGAATGCTTGGGGGCACGTTTaGCACCGAGTCAGCTCACCC +
Preference number: 5 (lower is better)
Translates to: SWTGLALLMQVHLLEILNAWGHV*HRVSSP
Trigger: GGGTGAGCTGACTCGGTGCAAAACGTGCCCCCAAGC...ATTCAGAATCTCTAGTAAGTGTACCTGCATCAATAAAGCCAAGCCGGTCCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CAA 90 bp CAACAGAATAGCAGAGACAGGTGGTTCATCAACAGATACTTATTTCTCACAGTTGGCTCTGCAGGTCCCTaGCAGCCCCTGGCACGTCTC +
Preference number: 5 (lower is better)
Translates to: QQNSRDRWFINRYLFLTVGSAGP*QPLARL
Trigger: GAGACGTGCCAGGGGCTGCAAGGGACCTGCAGAGCC...AACTGTGAGAAATAAGTATCTGTTGATGAACCACCTGTCTCTGCTATTCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS GCA 90 bp TATCACCAGTGTCGCCAGCCAGGTCACCTCTCTGAATTTTGTGGTTaGAACCTCCATGATTCCCTAGAGAGAAATGGGACAAATGCAAGT +
Preference number: 5 (lower is better)
Translates to: YHQCRQPGHLSEFCG*NLHDSLERNGTNAS
Trigger: ACTTGCATTTGTCCCATTTCTCTCTAGGGAATCATGGAGGTTGCAACCACAAAATTCAGAGAGGTGACCTGGCTGGCGACACTGGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629910.1
CDS-3UTR CAA 90 bp CATGCCTTAAGGGCTGCTGGTTGTGGGTGTCTGCTTGGTCCTGGAGAAACTACCTACCAGTTTACTTGGTaGAATGAAATCTGGATTTGC +
Preference number: 5 (lower is better)
Translates to: HALRAAGCGCLLGPGETTYQFTW*NEIWIC
Trigger: GCAAATCCAGATTTCATTCAACCAAGTAAACTGGTA...GGTAGTTTCTCCAGGACCAAGCAGACACCCACAACCAGCAGCCCTTAAGGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CAA 90 bp TTTCACTGGGAACCTGTCCCTGTCTGCCTAGGATTTGTCTGCCTCCTGTCACTACAGAGAAGAATTTTATaGAGAGACGGAACAGCTCTC +
Preference number: 5 (lower is better)
Translates to: FHWEPVPVCLGFVCLLSLQRRIL*RDGTAL
Trigger: GAGAGCTGTTCCGTCTCTCAATAAAATTCTTCTCTG...TAGTGACAGGAGGCAGACAAATCCTAGGCAGACAGGGACAGGTTCCCAGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS-3UTR CAA 90 bp AGCTGGACCGGCTTGGCTTTATTGATGCAGGTACACTTACTAGAGATTCTGAATTTTGGCTTAGTGATTTaGGGGCCCCAAGATTTATTT +
Preference number: 5 (lower is better)
Translates to: SWTGLALLMQVHLLEILNFGLVI*GPQDLF
Trigger: AAATAAATCTTGGGGCCCCAAAATCACTAAGCCAAA...ATTCAGAATCTCTAGTAAGTGTACCTGCATCAATAAAGCCAAGCCGGTCCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS GCA 72 bp GAAGCCGCGCAGAGCCAGGAGAGGTGCGCGGTCCCCTaGACGGTCCCCCGCAGGGTCCTCAGGGCGTGCGGG +
Preference number: 6 (lower is better)
Translates to: EAAQSQERCAVP*TVPRRVLRACG
Trigger: CCCGCACGCCCTGAGGACCCTGCGGGGGACCGTGCAGGGGACCGCGCACCTCTCCTGGCTCTGCGCGGCTTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS CCA 72 bp GGCCTCCTTGGTGTGAACCCTGCCGTCGGCCCCGCCTaGCCGTGCCCGCAGGATGGCCAGGGCCCTGGCGTG +
Preference number: 6 (lower is better)
Translates to: GLLGVNPAVGPA*PCPQDGQGPGV
Trigger: CACGCCAGGGCCCTGGCCATCCTGCGGGCACGGCCAGGCGGGGCCGACGGCAGGGTTCACACCAAGGAGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000629910.1
ENST00000637179.1
CDS TCA 72 bp CCCGGCCGTCCAGGAAGAAGGCCGAGGCCGCGCGGGTaGCCAGCAGGGCGGCTCGGCGCTCACCTTGGGGTT +
Preference number: 6 (lower is better)
Translates to: PGRPGRRPRPRG*PAGRLGAHLGV
Trigger: AACCCCAAGGTGAGCGCCGAGCCGCCCTGCTGGTCACCCGCGCGGCCTCGGCCTTCTTCCTGGACGGCCGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS GCA 72 bp CCCTGCGCTCTGGACGGCCCGGCGCGTGGAGATCGCTaGAGCATCCCACGGGCCTCCTCCCGCAGCACCACC +
Preference number: 6 (lower is better)
Translates to: PCALDGPARGDR*SIPRASSRSTT
Trigger: GGTGGTGCTGCGGGAGGAGGCCCGTGGGATGCTGCAGCGATCTCCACGCGCCGGGCCGTCCAGAGCGCAGGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000637179.1
CDS GCA 72 bp CTTGGTGTGAACCCTGCCGTCGGCCCCGCCTGGCCGTaGCCGCAGGATGGCCAGGGCCCTGGCGTGGCAGTG +
Preference number: 6 (lower is better)
Translates to: LGVNPAVGPAWP*PQDGQGPGVAV
Trigger: CACTGCCACGCCAGGGCCCTGGCCATCCTGCGGGCACGGCCAGGCGGGGCCGACGGCAGGGTTCACACCAAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000629910.1
ENST00000637179.1
CDS CCA 72 bp GGGCGGCTCGGCGCTCACCTTGGGGTTCGCTGCCGGTaGGATGGGCCTCGAGGGCCCGGCTGCATGCTGCCA +
Preference number: 6 (lower is better)
Translates to: GRLGAHLGVRCR*DGPRGPGCMLP
Trigger: TGGCAGCATGCAGCCGGGCCCTCGAGGCCCATCCCACCGGCAGCGAACCCCAAGGTGAGCGCCGAGCCGCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS GCA 72 bp GGCGAAGGCCTGGAGATAGGCGGCCACACCATCCGCTaGCTGCACCCCGGACAGGACCCAGGCGAGGGCGCG +
Preference number: 6 (lower is better)
Translates to: GEGLEIGGHTIR*LHPGQDPGEGA
Trigger: CGCGCCCTCGCCTGGGTCCTGTCCGGGGTGCAGGCAGCGGATGGTGTGGCCGCCTATCTCCAGGCCTTCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS CCA 72 bp GCTCGGCGCTCACCTTGGGGTTCGCTGCCGGTGGGATaGGCCTCGAGGGCCCGGCTGCATGCTGCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: ARRSPWGSLPVG*ASRARLHAARQ
Trigger: CTGCCTGGCAGCATGCAGCCGGGCCCTCGAGGCCCATCCCACCGGCAGCGAACCCCAAGGTGAGCGCCGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS CAA 72 bp GCCTGGGGCCTCCGGGATAGGGCCACCAGCAGGGCCTaGTGGGTCTCCTCCAGGCGGCCCAGGCGGTACAGG +
Preference number: 6 (lower is better)
Translates to: AWGLRDRATSRA*WVSSRRPRRYR
Trigger: CCTGTACCGCCTGGGCCGCCTGGAGGAGACCCACAAGGCCCTGCTGGTGGCCCTATCCCGGAGGCCCCAGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000637179.1
CDS CCA 72 bp CGGACGCGCTCCTGGTCCTGGACAGAGAACACGGCCTaGAACTGCCTCCGCGCCCCAGAGGGGCTCTCGCGG +
Preference number: 6 (lower is better)
Translates to: RTRSWSWTENTA*NCLRAPEGLSR
Trigger: CCGCGAGAGCCCCTCTGGGGCGCGGAGGCAGTTCCAGGCCGTGTTCTCTGTCCAGGACCAGGAGCGCGTCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS CCA 72 bp TCCTCGCGGAGCTCAGGGTGGTTCCGCACGGCTTCCTaGAAGCGGGCGAAGCCCACGTCCGCGGCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: SSRSSGWFRTAS*KRAKPTSAASC
Trigger: GCAGGAGGCCGCGGACGTGGGCTTCGCCCGCTTCCAGGAAGCCGTGCGGAACCACCCTGAGCTCCGCGAGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS CCA 72 bp AGCAGCTCGCGGCCCGCATCCTCGCGGAGCTCAGGGTaGTTCCGCACGGCTTCCTGGAAGCGGGCGAAGCCC +
Preference number: 6 (lower is better)
Translates to: SSSRPASSRSSG*FRTASWKRAKP
Trigger: GGGCTTCGCCCGCTTCCAGGAAGCCGTGCGGAACCACCCTGAGCTCCGCGAGGATGCGGGCCGCGAGCTGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS CCA 72 bp TGGGGCCTCCGGGATAGGGCCACCAGCAGGGCCTTGTaGGTCTCCTCCAGGCGGCCCAGGCGGTACAGGGCA +
Preference number: 6 (lower is better)
Translates to: WGLRDRATSRAL*VSSRRPRRYRA
Trigger: TGCCCTGTACCGCCTGGGCCGCCTGGAGGAGACCCACAAGGCCCTGCTGGTGGCCCTATCCCGGAGGCCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000637179.1
CDS CCA 72 bp TGCAGCAGGGCCAGTCGTGCCAGCACAGGGGCTGCCTaGGGCCTCCGGGATAGGGCCACCAGCAGGGCCTTG +
Preference number: 6 (lower is better)
Translates to: CSRASRASTGAA*GLRDRATSRAL
Trigger: CAAGGCCCTGCTGGTGGCCCTATCCCGGAGGCCCCAGGCAGCCCCTGTGCTGGCACGACTGGCCCTGCTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000637179.1
CDS GCA 72 bp GCCGGTGGGATGGGCCTCGAGGGCCCGGCTGCATGCTaGCAGGCAGTCCTCAAACCTGCCGCTGTGGAGCAG +
Preference number: 6 (lower is better)
Translates to: AGGMGLEGPAAC*QAVLKPAAVEQ
Trigger: CTGCTCCACAGCGGCAGGTTTGAGGACTGCCTGGCAGCATGCAGCCGGGCCCTCGAGGCCCATCCCACCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS GCA 72 bp GCTGCCGGTGGGATGGGCCTCGAGGGCCCGGCTGCATaGTGCCAGGCAGTCCTCAAACCTGCCGCTGTGGAG +
Preference number: 6 (lower is better)
Translates to: AAGGMGLEGPAA*CQAVLKPAAVE
Trigger: CTCCACAGCGGCAGGTTTGAGGACTGCCTGGCAGCATGCAGCCGGGCCCTCGAGGCCCATCCCACCGGCAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS GCA 72 bp CGCTCCTGGTCCTGGACAGAGAACACGGCCTGGAACTaGCTCCGCGCCCCAGAGGGGCTCTCGCGGAAGGCC +
Preference number: 6 (lower is better)
Translates to: RSWSWTENTAWN*LRAPEGLSRKA
Trigger: GGCCTTCCGCGAGAGCCCCTCTGGGGCGCGGAGGCAGTTCCAGGCCGTGTTCTCTGTCCAGGACCAGGAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS GCA 72 bp CTCCAGGCAGCACTGCCCGCGGAGAAGGAACATGCGTaGAGTGGGGGCCCGGCCTGGCTGCCTGCACAGGCT +
Preference number: 6 (lower is better)
Translates to: LQAALPAEKEHA*SGGPAWLPAQA
Trigger: AGCCTGTGCAGGCAGCCAGGCCGGGCCCCCACTGCACGCATGTTCCTTCTCCGCGGGCAGTGCTGCCTGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000629910.1
ENST00000637179.1
CDS CCA 72 bp AGGGCACTGAGCAGCGCGGGGAGGTGGGGCCGCTGGTaGGTGCGAATGAAAGCTACCGTCCGGTCGGCGCTG +
Preference number: 6 (lower is better)
Translates to: RALSSAGRWGRW*VRMKATVRSAL
Trigger: CAGCGCCGACCGGACGGTAGCTTTCATTCGCACCCACCAGCGGCCCCACCTCCCCGCGCTGCTCAGTGCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS CAA 72 bp CCAGGCGAGGGCGCGGGTCAGCCGCAGCTCCAGGACTaGCTGTGCATGAGAGTCCAGCAGGGCGCTGCAGCG +
Preference number: 6 (lower is better)
Translates to: PGEGAGQPQLQD*LCMRVQQGAAA
Trigger: CGCTGCAGCGCCCTGCTGGACTCTCATGCACAGCAAGTCCTGGAGCTGCGGCTGACCCGCGCCCTCGCCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS CAA 90 bp GCCAGGCTCTGCAGGTCCCTTGCAGCCCCTGGCACGTCTCCCTTCTaGAGCTGGAGCAGGCCCAGCCGGGCCCGGGCTGCCTCTGACGTT +
Preference number: 6 (lower is better)
Translates to: ARLCRSLAAPGTSPF*SWSRPSRARAASDV
Trigger: AACGTCAGAGGCAGCCCGGGCCCGGCTGGGCCTGCTCCAGCTCAAGAAGGGAGACGTGCCAGGGGCTGCAAGGGACCTGCAGAGCCTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000629910.1
ENST00000637179.1
CDS GCA 72 bp GGAGCAGAGCTTCAGGTGACAGGGTGTCACTCCGGGTaGCCCTGGGGTCCAGAGCCGCCAGGAGTCGCTGGC +
Preference number: 6 (lower is better)
Translates to: GAELQVTGCHSG*PWGPEPPGVAG
Trigger: GCCAGCGACTCCTGGCGGCTCTGGACCCCAGGGGCACCCGGAGTGACACCCTGTCACCTGAAGCTCTGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS CCA 72 bp GACCCTGTCAGGGAGACCACTGCCATGCCGTCCCAGTaGATGGCGGGGATCTGGCTGTCCCCGCGGCACCAG +
Preference number: 6 (lower is better)
Translates to: DPVRETTAMPSQ*MAGIWLSPRHQ
Trigger: CTGGTGCCGCGGGGACAGCCAGATCCCCGCCATCCACTGGGACGGCATGGCAGTGGTCTCCCTGACAGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS CCA 72 bp TCGCGGAAGGCCTCCTGCAGGTTCCAAAACACGTCCTaGGCCCGGCCGTCCAGGAAGAAGGCCGAGGCCGCG +
Preference number: 6 (lower is better)
Translates to: SRKASCRFQNTS*ARPSRKKAEAA
Trigger: CGCGGCCTCGGCCTTCTTCCTGGACGGCCGGGCCCAGGACGTGTTTTGGAACCTGCAGGAGGCCTTCCGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS CAA 72 bp GCAGGCGACCCTGACGGCAGAAGTCCTCTGCCCGCCTaGGGAGGTCACCATCCCCCAGCGCCTCCTGGAGCA +
Preference number: 6 (lower is better)
Translates to: AGDPDGRSPLPA*GGHHPPAPPGA
Trigger: TGCTCCAGGAGGCGCTGGGGGATGGTGACCTCCCAAGGCGGGCAGAGGACTTCTGCCGTCAGGGTCGCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000629910.1
ENST00000637179.1
CDS GCA 72 bp CAGAGGCCAGCGACCCTGTCAGGGAGACCACTGCCATaGCGTCCCAGTGGATGGCGGGGATCTGGCTGTCCC +
Preference number: 6 (lower is better)
Translates to: QRPATLSGRPLP*RPSGWRGSGCP
Trigger: GGGACAGCCAGATCCCCGCCATCCACTGGGACGGCATGGCAGTGGTCTCCCTGACAGGGTCGCTGGCCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS GCA 72 bp AGGGCCAGGTGCACCAACGCCCGTCCACACAGTGCCTaGACGTTCCCCGGCTCAGCCCGCAGCACTGTGTTG +
Preference number: 6 (lower is better)
Translates to: RARCTNARPHSA*TFPGSARSTVL
Trigger: CAACACAGTGCTGCGGGCTGAGCCGGGGAACGTGCAGGCACTGTGTGGACGGGCGTTGGTGCACCTGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000629910.1
ENST00000637179.1
CDS GCA 72 bp CAGCTGAGATCCGGGGCATCCACCTCGGCCAGGCTCTaGAGGTCCCTTGCAGCCCCTGGCACGTCTCCCTTC +
Preference number: 6 (lower is better)
Translates to: QLRSGASTSARL*RSLAAPGTSPF
Trigger: GAAGGGAGACGTGCCAGGGGCTGCAAGGGACCTGCAGAGCCTGGCCGAGGTGGATGCCCCGGATCTCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000629910.1
ENST00000637179.1
CDS CCA 72 bp CTGTCAGGGAGACCACTGCCATGCCGTCCCAGTGGATaGCGGGGATCTGGCTGTCCCCGCGGCACCAGGACT +
Preference number: 6 (lower is better)
Translates to: LSGRPLPCRPSG*RGSGCPRGTRT
Trigger: AGTCCTGGTGCCGCGGGGACAGCCAGATCCCCGCCATCCACTGGGACGGCATGGCAGTGGTCTCCCTGACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS CCA 72 bp GCAGCTGCCGGTCCTCGTGGCAGAAGACGTCCAGGGTaGGCTGGAGGCAGGCGGTGTCACCAGACTGGACCA +
Preference number: 6 (lower is better)
Translates to: AAAGPRGRRRPG*AGGRRCHQTGP
Trigger: TGGTCCAGTCTGGTGACACCGCCTGCCTCCAGCCCACCCTGGACGTCTTCTGCCACGAGGACCGGCAGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000637179.1
CDS TCA 72 bp GCGCGGGTCAGCCGCAGCTCCAGGACTTGCTGTGCATaGGAGTCCAGCAGGGCGCTGCAGCGTTGCACCACT +
Preference number: 6 (lower is better)
Translates to: ARVSRSSRTCCA*ESSRALQRCTT
Trigger: AGTGGTGCAACGCTGCAGCGCCCTGCTGGACTCTCATGCACAGCAAGTCCTGGAGCTGCGGCTGACCCGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS GCA 72 bp GAAGGCAGAGGCCAGCGACCCTGTCAGGGAGACCACTaGCATGCCGTCCCAGTGGATGGCGGGGATCTGGCT +
Preference number: 6 (lower is better)
Translates to: EGRGQRPCQGDH*HAVPVDGGDLA
Trigger: AGCCAGATCCCCGCCATCCACTGGGACGGCATGGCAGTGGTCTCCCTGACAGGGTCGCTGGCCTCTGCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS CCA 72 bp TGCCGGTCCTCGTGGCAGAAGACGTCCAGGGTGGGCTaGAGGCAGGCGGTGTCACCAGACTGGACCAGCTTC +
Preference number: 6 (lower is better)
Translates to: CRSSWQKTSRVG*RQAVSPDWTSF
Trigger: GAAGCTGGTCCAGTCTGGTGACACCGCCTGCCTCCAGCCCACCCTGGACGTCTTCTGCCACGAGGACCGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000637179.1
CDS CCA 72 bp CAAAGATGGCCAGAGACAGGTAGGCGATGGCCTCCTTaGTGTGAACCCTGCCGTCGGCCCCGCCTGGCCGTG +
Preference number: 6 (lower is better)
Translates to: QRWPETGRRWPP*CEPCRRPRLAV
Trigger: CACGGCCAGGCGGGGCCGACGGCAGGGTTCACACCAAGGAGGCCATCGCCTACCTGTCTCTGGCCATCTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000629910.1
ENST00000637179.1
CDS CCA 72 bp CTGGGTGTCCTTGTCCTCGAGAGGGGCCCCAGTGTCTaGCAGCTGGCTCAGAAGGGCCCGGCAGTGGGAGTA +
Preference number: 6 (lower is better)
Translates to: LGVLVLERGPSV*QLAQKGPAVGV
Trigger: TACTCCCACTGCCGGGCCCTTCTGAGCCAGCTGCCAGACACTGGGGCCCCTCTCGAGGACAAGGACACCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000629910.1
ENST00000637179.1
CDS CAA 90 bp CTCCAGGACTTGCTGTGCATGAGAGTCCAGCAGGGCGCTGCAGCGTaGCACCACTTCTTCGTGACGCCCGCGGGCCAGCAGACCTGCCAG +
Preference number: 6 (lower is better)
Translates to: LQDLLCMRVQQGAAA*HHFFVTPAGQQTCQ
Trigger: CTGGCAGGTCTGCTGGCCCGCGGGCGTCACGAAGAAGTGGTGCAACGCTGCAGCGCCCTGCTGGACTCTCATGCACAGCAAGTCCTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS TCA 72 bp GGAGGAGGTGCCAGTGCGGTTGCCCTGAGTCGATTTTaGTCAGCGCCTCCCCCACAGCAAGGAGGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: GGGASAVALSRF*SAPPPQQGGPG
Trigger: CCCAGGGCCTCCTTGCTGTGGGGGAGGCGCTGATCAAAATCGACTCAGGGCAACCGCACTGGCACCTCCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000629910.1
ENST00000637179.1
CDS GCA 72 bp CCAGGACTTGCTGTGCATGAGAGTCCAGCAGGGCGCTaGAGCGTTGCACCACTTCTTCGTGACGCCCGCGGG +
Preference number: 6 (lower is better)
Translates to: PGLAVHESPAGR*SVAPLLRDARG
Trigger: CCCGCGGGCGTCACGAAGAAGTGGTGCAACGCTGCAGCGCCCTGCTGGACTCTCATGCACAGCAAGTCCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS GCA 72 bp GGGCCCGGCTGCATGCTGCCAGGCAGTCCTCAAACCTaGCGCTGTGGAGCAGAGCTTCAGGTGACAGGGTGT +
Preference number: 6 (lower is better)
Translates to: GPGCMLPGSPQT*RCGAELQVTGC
Trigger: ACACCCTGTCACCTGAAGCTCTGCTCCACAGCGGCAGGTTTGAGGACTGCCTGGCAGCATGCAGCCGGGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS GCA 72 bp TCGTCCACGGCTTCCTGCAGCTGGTCTAGGGCCAGGTaGACCAACGCCCGTCCACACAGTGCCTGCACGTTC +
Preference number: 6 (lower is better)
Translates to: SSTASCSWSRAR*TNARPHSACTF
Trigger: GAACGTGCAGGCACTGTGTGGACGGGCGTTGGTGCACCTGGCCCTAGACCAGCTGCAGGAAGCCGTGGACGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000629910.1
ENST00000637179.1
CDS CCA 72 bp TTCCTGCGGCAAAGATGGCCAGAGACAGGTAGGCGATaGCCTCCTTGGTGTGAACCCTGCCGTCGGCCCCGC +
Preference number: 6 (lower is better)
Translates to: FLRQRWPETGRR*PPWCEPCRRPR
Trigger: GCGGGGCCGACGGCAGGGTTCACACCAAGGAGGCCATCGCCTACCTGTCTCTGGCCATCTTTGCCGCAGGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000629910.1
ENST00000637179.1
CDS CAA 72 bp TTGCTGTGCATGAGAGTCCAGCAGGGCGCTGCAGCGTaGCACCACTTCTTCGTGACGCCCGCGGGCCAGCAG +
Preference number: 6 (lower is better)
Translates to: LLCMRVQQGAAA*HHFFVTPAGQQ
Trigger: CTGCTGGCCCGCGGGCGTCACGAAGAAGTGGTGCAACGCTGCAGCGCCCTGCTGGACTCTCATGCACAGCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS TCA 72 bp TGGTCCTCAGAGTACACTCGTCTGCAGCTTGGAGGCTaGGCCGGCTGTGCCCTGGGGACCCAGATTCCCTCG +
Preference number: 6 (lower is better)
Translates to: WSSEYTRLQLGG*AGCALGTQIPS
Trigger: CGAGGGAATCTGGGTCCCCAGGGCACAGCCGGCTCAGCCTCCAAGCTGCAGACGAGTGTACTCTGAGGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS CAA 72 bp AGGAGGAGGTGCCAGTGCGGTTGCCCTGAGTCGATTTaGATCAGCGCCTCCCCCACAGCAAGGAGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: RRRCQCGCPESI*ISASPTARRPW
Trigger: CCAGGGCCTCCTTGCTGTGGGGGAGGCGCTGATCAAAATCGACTCAGGGCAACCGCACTGGCACCTCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000629910.1
ENST00000637179.1
CDS CAA 90 bp ATGTCTGCCAGGAGGAGGTGCCAGTGCGGTTGCCCTGAGTCGATTTaGATCAGCGCCTCCCCCACAGCAAGGAGGCCCTGGGTGTCCTTG +
Preference number: 6 (lower is better)
Translates to: MSARRRCQCGCPESI*ISASPTARRPWVSL
Trigger: CAAGGACACCCAGGGCCTCCTTGCTGTGGGGGAGGCGCTGATCAAAATCGACTCAGGGCAACCGCACTGGCACCTCCTCCTGGCAGACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000629910.1
ENST00000637179.1
CDS CCA 72 bp CTGCATGCTGCCAGGCAGTCCTCAAACCTGCCGCTGTaGAGCAGAGCTTCAGGTGACAGGGTGTCACTCCGG +
Preference number: 6 (lower is better)
Translates to: LHAARQSSNLPL*SRASGDRVSLR
Trigger: CCGGAGTGACACCCTGTCACCTGAAGCTCTGCTCCACAGCGGCAGGTTTGAGGACTGCCTGGCAGCATGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401095.8
CDS TCA 72 bp AATGTCTGCCAGGAGGAGGTGCCAGTGCGGTTGCCCTaGGTCGATTTTGATCAGCGCCTCCCCCACAGCAAG +
Preference number: 6 (lower is better)
Translates to: NVCQEEVPVRLP*VDFDQRLPHSK
Trigger: CTTGCTGTGGGGGAGGCGCTGATCAAAATCGACTCAGGGCAACCGCACTGGCACCTCCTCCTGGCAGACATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000629910.1
ENST00000637179.1
CDS GCA 72 bp ATGAGAATGTCTGCCAGGAGGAGGTGCCAGTGCGGTTaGCCTGAGTCGATTTTGATCAGCGCCTCCCCCACA +
Preference number: 6 (lower is better)
Translates to: MRMSARRRCQCG*PESILISASPT
Trigger: TGTGGGGGAGGCGCTGATCAAAATCGACTCAGGGCAACCGCACTGGCACCTCCTCCTGGCAGACATTCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000401095.8
ENST00000611612.2
ENST00000629910.1
ENST00000637179.1