Pregenerated sensors for TTC32-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000271991Ensembl transcript IDs: ENST00000607190.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CGGATAGTGTCTCGCAGCATCAGACAACGGACTTGGAAATCAGTTTaGGACCACGCATCTGCGCCTTTTCTAGGAAAAGAGGAAGGCGGG | + |
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Preference number: 5 (lower is better) Translates to: RIVSRSIRQRTWKSV*DHASAPFLGKEEGG Trigger: CCCGCCTTCCTCTTTTCCTAGAAAAGGCGCAGATGCGTGGTCGCAAACTGATTTCCAAGTCCGTTGTCTGATGCTGCGAGACACTATCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607190.1 |
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| CDS CCA 90 bp | CGCTGTAACAAACGGATAGTGTCTCGCAGCATCAGACAACGGACTTaGAAATCAGTTTGCGACCACGCATCTGCGCCTTTTCTAGGAAAA | + |
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Preference number: 5 (lower is better) Translates to: RCNKRIVSRSIRQRT*KSVCDHASAPFLGK Trigger: TTTTCCTAGAAAAGGCGCAGATGCGTGGTCGCAAACTGATTTCCAAGTCCGTTGTCTGATGCTGCGAGACACTATCCGTTTGTTACAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607190.1 |
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| CDS CAA 90 bp | ACGGATAGTGTCTCGCAGCATCAGACAACGGACTTGGAAATCAGTTaGCGACCACGCATCTGCGCCTTTTCTAGGAAAAGAGGAAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: TDSVSQHQTTDLEIS*RPRICAFSRKRGRR Trigger: CCGCCTTCCTCTTTTCCTAGAAAAGGCGCAGATGCGTGGTCGCAAACTGATTTCCAAGTCCGTTGTCTGATGCTGCGAGACACTATCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607190.1 |
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| CDS GCA 72 bp | ACAACGGACTTGGAAATCAGTTTGCGACCACGCATCTaGGCCTTTTCTAGGAAAAGAGGAAGGCGGGTCCAA | + |
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Preference number: 6 (lower is better) Translates to: TTDLEISLRPRI*AFSRKRGRRVQ Trigger: TTGGACCCGCCTTCCTCTTTTCCTAGAAAAGGCGCAGATGCGTGGTCGCAAACTGATTTCCAAGTCCGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607190.1 |
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| CDS CAA 72 bp | CAAACGGATAGTGTCTCGCAGCATCAGACAACGGACTaGGAAATCAGTTTGCGACCACGCATCTGCGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: QTDSVSQHQTTD*EISLRPRICAF Trigger: AAAGGCGCAGATGCGTGGTCGCAAACTGATTTCCAAGTCCGTTGTCTGATGCTGCGAGACACTATCCGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607190.1 |
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| CDS CAA 90 bp | TTCAGGGTAGACAAAGCCTACTCAGAACACCCTAAACGCGGAGTTTaGCTAAGTTGGGACGCTAAAAGGCAAGGGAATGACAGGACGTCC | + |
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Preference number: 6 (lower is better) Translates to: FRVDKAYSEHPKRGV*LSWDAKRQGNDRTS Trigger: GGACGTCCTGTCATTCCCTTGCCTTTTAGCGTCCCAACTTAGCAAAACTCCGCGTTTAGGGTGTTCTGAGTAGGCTTTGTCTACCCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607190.1 |
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| CDS GCA 72 bp | TCTCGCAGCATCAGACAACGGACTTGGAAATCAGTTTaGGACCACGCATCTGCGCCTTTTCTAGGAAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: SRSIRQRTWKSV*DHASAPFLGKE Trigger: CTCTTTTCCTAGAAAAGGCGCAGATGCGTGGTCGCAAACTGATTTCCAAGTCCGTTGTCTGATGCTGCGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607190.1 |
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| CDS CCA 72 bp | AAACGGATAGTGTCTCGCAGCATCAGACAACGGACTTaGAAATCAGTTTGCGACCACGCATCTGCGCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: KRIVSRSIRQRT*KSVCDHASAPF Trigger: AAAAGGCGCAGATGCGTGGTCGCAAACTGATTTCCAAGTCCGTTGTCTGATGCTGCGAGACACTATCCGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607190.1 |
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| CDS CCA 72 bp | TACTCAGAACACCCTAAACGCGGAGTTTTGCTAAGTTaGGACGCTAAAAGGCAAGGGAATGACAGGACGTCC | + |
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Preference number: 6 (lower is better) Translates to: YSEHPKRGVLLS*DAKRQGNDRTS Trigger: GGACGTCCTGTCATTCCCTTGCCTTTTAGCGTCCCAACTTAGCAAAACTCCGCGTTTAGGGTGTTCTGAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607190.1 |
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| CDS CAA 72 bp | GTCTCGCAGCATCAGACAACGGACTTGGAAATCAGTTaGCGACCACGCATCTGCGCCTTTTCTAGGAAAAGA | + |
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Preference number: 6 (lower is better) Translates to: VSQHQTTDLEIS*RPRICAFSRKR Trigger: TCTTTTCCTAGAAAAGGCGCAGATGCGTGGTCGCAAACTGATTTCCAAGTCCGTTGTCTGATGCTGCGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607190.1 |
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| CDS CAA 72 bp | GACAAAGCCTACTCAGAACACCCTAAACGCGGAGTTTaGCTAAGTTGGGACGCTAAAAGGCAAGGGAATGAC | + |
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Preference number: 6 (lower is better) Translates to: DKAYSEHPKRGV*LSWDAKRQGND Trigger: GTCATTCCCTTGCCTTTTAGCGTCCCAACTTAGCAAAACTCCGCGTTTAGGGTGTTCTGAGTAGGCTTTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607190.1 |
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| CDS CCA 72 bp | AAAGGTAGAGAAGTTTGGACCGTGGAACAGACCTGGTaGAATGTCGACACAAAGCGTTTCAGGGTAGACAAA | + |
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Preference number: 6 (lower is better) Translates to: KGREVWTVEQTW*NVDTKRFRVDK Trigger: TTTGTCTACCCTGAAACGCTTTGTGTCGACATTCCACCAGGTCTGTTCCACGGTCCAAACTTCTCTACCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607190.1 |
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