Pregenerated sensors for TTC32 (Homo sapiens)
Ensembl gene IDs: ENSG00000183891Ensembl transcript IDs: ENST00000333610.4, ENST00000402414.1, ENST00000431392.1, ENST00000495698.1
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGGGTGAGAGGCGGCGGCCCGCGCCCGAGGATCGCGCAGAGGGCTTaGTTCCCGGAAATCTCTCCGCACCGTCGCGGCAGCTGGCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: GVRGGGPRPRIAQRA*FPEISPHRRGSWLL Trigger: GAGGAGCCAGCTGCCGCGACGGTGCGGAGAGATTTCCGGGAACCAAGCCCTCTGCGCGATCCTCGGGCGCGGGCCGCCGCCTCTCACCCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431392.1 |
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| CDS CCA 90 bp | CAGAGGGCTTGGTTCCCGGAAATCTCTCCGCACCGTCGCGGCAGCTaGCTCCTCACGGGTGGGCTTCTCCCCGCGTTCTCCGCCGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: QRAWFPEISPHRRGS*LLTGGLLPAFSAAL Trigger: GAGGGCGGCGGAGAACGCGGGGAGAAGCCCACCCGTGAGGAGCCAGCTGCCGCGACGGTGCGGAGAGATTTCCGGGAACCAAGCCCTCTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431392.1 |
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| CDS TCA 90 bp | AGTCTCTGGGTGCGAATGAGGAACGTGGAAGGAGAGACGGCGGGGTaGGAGGCGGCGGCCCGCGCCCGAGGATCGCGCAGAGGGCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: SLWVRMRNVEGETAG*EAAARARGSRRGLG Trigger: ACCAAGCCCTCTGCGCGATCCTCGGGCGCGGGCCGCCGCCTCTCACCCCGCCGTCTCTCCTTCCACGTTCCTCATTCGCACCCAGAGACT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431392.1 |
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| CDS CCA 90 bp | ACCAAGAGCCTGCGCCGTGACACTGAGATGGGAGTCGCGGTACTGTaGCCCTACGCAGCCGTGACCCCTTCCCTTCCCAGGTCGCGGATT | + |
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Preference number: 5 (lower is better) Translates to: TKSLRRDTEMGVAVL*PYAAVTPSLPRSRI Trigger: AATCCGCGACCTGGGAAGGGAAGGGGTCACGGCTGCGTAGGGCCACAGTACCGCGACTCCCATCTCAGTGTCACGGCGCAGGCTCTTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431392.1 |
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| CDS GCA 90 bp | GCTGGAGGCCGCGCAAGCGCACCGGCGAATGTAAGCGGAGTACAGTaGCTCGGCCTCCGCGTACTCTCCATTGTTGAAATGAGCCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: AGGRASAPANVSGVQ*LGLRVLSIVEMSLG Trigger: GCCCAGGCTCATTTCAACAATGGAGAGTACGCGGAGGCCGAGGCACTGTACTCCGCTTACATTCGCCGGTGCGCTTGCGCGGCCTCCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333610.4 ENST00000402414.1 |
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| CDS TCA 90 bp | GCGGAGTACAGTGCCTCGGCCTCCGCGTACTCTCCATTGTTGAAATaGGCCTGGGCGAGTGTTAGGGTTGCGTGGCTTTCTTGCCGCTGT | + |
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Preference number: 5 (lower is better) Translates to: AEYSASASAYSPLLK*AWASVRVAWLSCRC Trigger: ACAGCGGCAAGAAAGCCACGCAACCCTAACACTCGCCCAGGCTCATTTCAACAATGGAGAGTACGCGGAGGCCGAGGCACTGTACTCCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333610.4 ENST00000402414.1 |
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| CDS CCA 90 bp | CCGCTGTCCTTCCATAGCAGCCAAGGCCTAGTTTTCGGTGTAGAATaGGGGTTGACCTCCGAGCGGTTAGAGGTGGCACCACAAAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: PLSFHSSQGLVFGVE*GLTSERLEVAPQSH Trigger: GTGGCTTTGTGGTGCCACCTCTAACCGCTCGGAGGTCAACCCCCATTCTACACCGAAAACTAGGCCTTGGCTGCTATGGAAGGACAGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000333610.4 ENST00000402414.1 |
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| CDS TCA 90 bp | TGTAAGCGGAGTACAGTGCCTCGGCCTCCGCGTACTCTCCATTGTTaGAATGAGCCTGGGCGAGTGTTAGGGTTGCGTGGCTTTCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: CKRSTVPRPPRTLHC*NEPGRVLGLRGFLA Trigger: GGCAAGAAAGCCACGCAACCCTAACACTCGCCCAGGCTCATTTCAACAATGGAGAGTACGCGGAGGCCGAGGCACTGTACTCCGCTTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333610.4 ENST00000402414.1 |
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| CDS GCA 90 bp | ATAAAAATCAACCCTGAAGTACTTGATTTGCCCCCTGTTGTTATATaGAGTAGCCAAATCCTCAGGGCTGCATTTGCTCCCGGGACTCTC | + |
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Preference number: 5 (lower is better) Translates to: IKINPEVLDLPPVVI*SSQILRAAFAPGTL Trigger: GAGAGTCCCGGGAGCAAATGCAGCCCTGAGGATTTGGCTACTGCATATAACAACAGGGGGCAAATCAAGTACTTCAGGGTTGATTTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000333610.4 |
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| CDS CCA 90 bp | GCCTATACAGTATCAACCCTCTGTTGTAATATGGAACTTCAAAATTaGGTTGGACTTCTATGGCAGATGTGTAGTCATCCATGGCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: AYTVSTLCCNMELQN*VGLLWQMCSHPWLH Trigger: ATGAAGCCATGGATGACTACACATCTGCCATAGAAGTCCAACCCAATTTTGAAGTTCCATATTACAACAGAGGGTTGATACTGTATAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000333610.4 ENST00000431392.1 ENST00000495698.1 |
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| CDS CCA 90 bp | ATCAAAATATCCCAGCCTATACAGTATCAACCCTCTGTTGTAATATaGAACTTCAAAATTGGGTTGGACTTCTATGGCAGATGTGTAGTC | + |
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Preference number: 5 (lower is better) Translates to: IKISQPIQYQPSVVI*NFKIGLDFYGRCVV Trigger: GACTACACATCTGCCATAGAAGTCCAACCCAATTTTGAAGTTCCATATTACAACAGAGGGTTGATACTGTATAGGCTGGGATATTTTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000333610.4 ENST00000495698.1 |
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| CDS CCA 90 bp | AGTAACTATGTGATGATGACATGGTGGTTCCTTCTGAAACATCCATaGATGAATACAATAGGTAAACTGATAATGCTTAAGCCAAGTGAT | + |
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Preference number: 5 (lower is better) Translates to: SNYVMMTWWFLLKHP*MNTIGKLIMLKPSD Trigger: ATCACTTGGCTTAAGCATTATCAGTTTACCTATTGTATTCATCCATGGATGTTTCAGAAGGAACCACCATGTCATCATCACATAGTTACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431392.1 |
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| CDS CCA 90 bp | AACACTGACGACTTGATATTAAGTAACTATGTGATGATGACATGGTaGTTCCTTCTGAAACATCCATGGATGAATACAATAGGTAAACTG | + |
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Preference number: 5 (lower is better) Translates to: NTDDLILSNYVMMTW*FLLKHPWMNTIGKL Trigger: CAGTTTACCTATTGTATTCATCCATGGATGTTTCAGAAGGAACCACCATGTCATCATCACATAGTTACTTAATATCAAGTCGTCAGTGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431392.1 |
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| CDS CCA 90 bp | TCCAACACTGACGACTTGATATTAAGTAACTATGTGATGATGACATaGTGGTTCCTTCTGAAACATCCATGGATGAATACAATAGGTAAA | + |
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Preference number: 5 (lower is better) Translates to: SNTDDLILSNYVMMT*WFLLKHPWMNTIGK Trigger: TTTACCTATTGTATTCATCCATGGATGTTTCAGAAGGAACCACCATGTCATCATCACATAGTTACTTAATATCAAGTCGTCAGTGTTGGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431392.1 |
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| CDS CCA 72 bp | GGCGGCGGCCCGCGCCCGAGGATCGCGCAGAGGGCTTaGTTCCCGGAAATCTCTCCGCACCGTCGCGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: GGGPRPRIAQRA*FPEISPHRRGS Trigger: GCTGCCGCGACGGTGCGGAGAGATTTCCGGGAACCAAGCCCTCTGCGCGATCCTCGGGCGCGGGCCGCCGCC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431392.1 |
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| CDS CAA 72 bp | AGGCGGCGGCCCGCGCCCGAGGATCGCGCAGAGGGCTaGGTTCCCGGAAATCTCTCCGCACCGTCGCGGCAG | + |
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Preference number: 6 (lower is better) Translates to: RRRPAPEDRAEG*VPGNLSAPSRQ Trigger: CTGCCGCGACGGTGCGGAGAGATTTCCGGGAACCAAGCCCTCTGCGCGATCCTCGGGCGCGGGCCGCCGCCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431392.1 |
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| CDS CAA 90 bp | CGGGGTGAGAGGCGGCGGCCCGCGCCCGAGGATCGCGCAGAGGGCTaGGTTCCCGGAAATCTCTCCGCACCGTCGCGGCAGCTGGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: RGERRRPAPEDRAEG*VPGNLSAPSRQLAP Trigger: AGGAGCCAGCTGCCGCGACGGTGCGGAGAGATTTCCGGGAACCAAGCCCTCTGCGCGATCCTCGGGCGCGGGCCGCCGCCTCTCACCCCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431392.1 |
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| CDS CCA 72 bp | CCTCAGGGCTGCATTTGCTCCCGGGACTCTCGTCGCTaGAGGCCGCGCAAGCGCACCGGCGAATGTAAGCGG | + |
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Preference number: 6 (lower is better) Translates to: PQGCICSRDSRR*RPRKRTGECKR Trigger: CCGCTTACATTCGCCGGTGCGCTTGCGCGGCCTCCAGCGACGAGAGTCCCGGGAGCAAATGCAGCCCTGAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333610.4 |
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| CDS CCA 72 bp | TGGTTCCCGGAAATCTCTCCGCACCGTCGCGGCAGCTaGCTCCTCACGGGTGGGCTTCTCCCCGCGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: WFPEISPHRRGS*LLTGGLLPAFS Trigger: GGAGAACGCGGGGAGAAGCCCACCCGTGAGGAGCCAGCTGCCGCGACGGTGCGGAGAGATTTCCGGGAACCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431392.1 |
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| CDS TCA 72 bp | AGATGGGAGTCGCGGTACTGTGGCCCTACGCAGCCGTaGCCCCTTCCCTTCCCAGGTCGCGGATTTCCCGCC | + |
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Preference number: 6 (lower is better) Translates to: RWESRYCGPTQP*PLPFPGRGFPA Trigger: GGCGGGAAATCCGCGACCTGGGAAGGGAAGGGGTCACGGCTGCGTAGGGCCACAGTACCGCGACTCCCATCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431392.1 |
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| CDS CCA 72 bp | CTGCGCCGTGACACTGAGATGGGAGTCGCGGTACTGTaGCCCTACGCAGCCGTGACCCCTTCCCTTCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: LRRDTEMGVAVL*PYAAVTPSLPR Trigger: CCTGGGAAGGGAAGGGGTCACGGCTGCGTAGGGCCACAGTACCGCGACTCCCATCTCAGTGTCACGGCGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431392.1 |
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| CDS CCA 72 bp | AGCATCATCAAAATATCCTCCCGGGACTCTCGTCGCTaGAGGCCGCGCAAGCGCACCGGCGAATGTAAGCGG | + |
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Preference number: 6 (lower is better) Translates to: SIIKISSRDSRR*RPRKRTGECKR Trigger: CCGCTTACATTCGCCGGTGCGCTTGCGCGGCCTCCAGCGACGAGAGTCCCGGGAGGATATTTTGATGATGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000402414.1 |
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| CDS GCA 72 bp | CGCGCAAGCGCACCGGCGAATGTAAGCGGAGTACAGTaGCTCGGCCTCCGCGTACTCTCCATTGTTGAAATG | + |
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Preference number: 6 (lower is better) Translates to: RASAPANVSGVQ*LGLRVLSIVEM Trigger: CATTTCAACAATGGAGAGTACGCGGAGGCCGAGGCACTGTACTCCGCTTACATTCGCCGGTGCGCTTGCGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333610.4 ENST00000402414.1 |
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| CDS TCA 72 bp | AGTACAGTGCCTCGGCCTCCGCGTACTCTCCATTGTTaGAATGAGCCTGGGCGAGTGTTAGGGTTGCGTGGC | + |
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Preference number: 6 (lower is better) Translates to: STVPRPPRTLHC*NEPGRVLGLRG Trigger: GCCACGCAACCCTAACACTCGCCCAGGCTCATTTCAACAATGGAGAGTACGCGGAGGCCGAGGCACTGTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333610.4 ENST00000402414.1 |
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| CDS TCA 72 bp | AGTGCCTCGGCCTCCGCGTACTCTCCATTGTTGAAATaGGCCTGGGCGAGTGTTAGGGTTGCGTGGCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: SASASAYSPLLK*AWASVRVAWLS Trigger: AGAAAGCCACGCAACCCTAACACTCGCCCAGGCTCATTTCAACAATGGAGAGTACGCGGAGGCCGAGGCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333610.4 ENST00000402414.1 |
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| CDS CAA 72 bp | AGCAGCCAAGGCCTAGTTTTCGGTGTAGAATGGGGGTaGACCTCCGAGCGGTTAGAGGTGGCACCACAAAGC | + |
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Preference number: 6 (lower is better) Translates to: SSQGLVFGVEWG*TSERLEVAPQS Trigger: GCTTTGTGGTGCCACCTCTAACCGCTCGGAGGTCAACCCCCATTCTACACCGAAAACTAGGCCTTGGCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000333610.4 ENST00000402414.1 |
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| CDS CAA 90 bp | TCCTTCCATAGCAGCCAAGGCCTAGTTTTCGGTGTAGAATGGGGGTaGACCTCCGAGCGGTTAGAGGTGGCACCACAAAGCCACTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: SFHSSQGLVFGVEWG*TSERLEVAPQSHFH Trigger: GTGGAAGTGGCTTTGTGGTGCCACCTCTAACCGCTCGGAGGTCAACCCCCATTCTACACCGAAAACTAGGCCTTGGCTGCTATGGAAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000333610.4 ENST00000402414.1 |
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| CDS CCA 72 bp | TTCCATAGCAGCCAAGGCCTAGTTTTCGGTGTAGAATaGGGGTTGACCTCCGAGCGGTTAGAGGTGGCACCA | + |
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Preference number: 6 (lower is better) Translates to: FHSSQGLVFGVE*GLTSERLEVAP Trigger: TGGTGCCACCTCTAACCGCTCGGAGGTCAACCCCCATTCTACACCGAAAACTAGGCCTTGGCTGCTATGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000333610.4 ENST00000402414.1 |
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| CDS GCA 72 bp | AACCCTGAAGTACTTGATTTGCCCCCTGTTGTTATATaGAGTAGCCAAATCCTCAGGGCTGCATTTGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: NPEVLDLPPVVI*SSQILRAAFAP Trigger: GGGAGCAAATGCAGCCCTGAGGATTTGGCTACTGCATATAACAACAGGGGGCAAATCAAGTACTTCAGGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333610.4 |
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| CDS CAA 90 bp | GTAGTCATCCATGGCTTCATAAAAATCAACCCTGAAGTACTTGATTaGCCCCCTGTTGTTATATGCAGTAGCCAAATCCTCAGGGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: VVIHGFIKINPEVLD*PPVVICSSQILRAA Trigger: TGCAGCCCTGAGGATTTGGCTACTGCATATAACAACAGGGGGCAAATCAAGTACTTCAGGGTTGATTTTTATGAAGCCATGGATGACTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000333610.4 ENST00000431392.1 ENST00000495698.1 |
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| CDS GCA 72 bp | AACCCTGAAGTACTTGATTTGCCCCCTGTTGTTATATaGAGTAGCCAAATCCTCAGGGCTGCATTTGCTTAT | + |
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Preference number: 6 (lower is better) Translates to: NPEVLDLPPVVI*SSQILRAAFAY Trigger: ATAAGCAAATGCAGCCCTGAGGATTTGGCTACTGCATATAACAACAGGGGGCAAATCAAGTACTTCAGGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000431392.1 |
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| CDS GCA 72 bp | AACCCTGAAGTACTTGATTTGCCCCCTGTTGTTATATaGAGTAGCCAAATCCTCAGGGCTGCATTTGCTTTA | + |
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Preference number: 6 (lower is better) Translates to: NPEVLDLPPVVI*SSQILRAAFAL Trigger: TAAAGCAAATGCAGCCCTGAGGATTTGGCTACTGCATATAACAACAGGGGGCAAATCAAGTACTTCAGGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000495698.1 |
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| CDS CAA 72 bp | CAACCCTCTGTTGTAATATGGAACTTCAAAATTGGGTaGGACTTCTATGGCAGATGTGTAGTCATCCATGGC | + |
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Preference number: 6 (lower is better) Translates to: QPSVVIWNFKIG*DFYGRCVVIHG Trigger: GCCATGGATGACTACACATCTGCCATAGAAGTCCAACCCAATTTTGAAGTTCCATATTACAACAGAGGGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000333610.4 ENST00000431392.1 ENST00000495698.1 |
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| CDS CAA 72 bp | CTAAGCAAAGAGGGAAAGCCAGCCCAAAGCCCGAGTTaGCTATGGATATGTCACAATGTGAATCAATTTCAT | + |
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Preference number: 6 (lower is better) Translates to: LSKEGKPAQSPS*LWICHNVNQFH Trigger: ATGAAATTGATTCACATTGTGACATATCCATAGCAAACTCGGGCTTTGGGCTGGCTTTCCCTCTTTGCTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000495698.1 |
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| CDS CCA 72 bp | TCCCAGCCTATACAGTATCAACCCTCTGTTGTAATATaGAACTTCAAAATTGGGTTGGACTTCTATGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SQPIQYQPSVVI*NFKIGLDFYGR Trigger: TCTGCCATAGAAGTCCAACCCAATTTTGAAGTTCCATATTACAACAGAGGGTTGATACTGTATAGGCTGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000333610.4 ENST00000495698.1 |
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| CDS CAA 72 bp | CATGGCTTCATAAAAATCAACCCTGAAGTACTTGATTaGCCCCCTGTTGTTATATGCAGTAGCCAAATCCTC | + |
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Preference number: 6 (lower is better) Translates to: HGFIKINPEVLD*PPVVICSSQIL Trigger: GAGGATTTGGCTACTGCATATAACAACAGGGGGCAAATCAAGTACTTCAGGGTTGATTTTTATGAAGCCATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000333610.4 ENST00000431392.1 ENST00000495698.1 |
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| CDS CCA 72 bp | GTATCAACCCTCTGTTGTAATATGGAACTTCAAAATTaGGTTGGACTTCTATGGCAGATGTGTAGTCATCCA | + |
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Preference number: 6 (lower is better) Translates to: VSTLCCNMELQN*VGLLWQMCSHP Trigger: TGGATGACTACACATCTGCCATAGAAGTCCAACCCAATTTTGAAGTTCCATATTACAACAGAGGGTTGATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000333610.4 ENST00000431392.1 ENST00000495698.1 |
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| CDS CAA 90 bp | TGCATTTGCTTATTAGTCGATCAGAATGGTTCCAACACTGACGACTaGATATTAAGTAACTATGTGATGATGACATGGTGGTTCCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: CICLLVDQNGSNTDD*ILSNYVMMTWWFLL Trigger: CAGAAGGAACCACCATGTCATCATCACATAGTTACTTAATATCAAGTCGTCAGTGTTGGAACCATTCTGATCGACTAATAAGCAAATGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431392.1 |
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| CDS CAA 90 bp | ATACAGTATCAACCCTCTGTTGTAATATGGAACTTCAAAATTGGGTaGGACTTCTATGGCAGATGTGTAGTCATCCATGGCTTCATAAAA | + |
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Preference number: 6 (lower is better) Translates to: IQYQPSVVIWNFKIG*DFYGRCVVIHGFIK Trigger: TTTTATGAAGCCATGGATGACTACACATCTGCCATAGAAGTCCAACCCAATTTTGAAGTTCCATATTACAACAGAGGGTTGATACTGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000333610.4 ENST00000431392.1 ENST00000495698.1 |
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| CDS TCA 72 bp | CATCTTGAAATCCAGGATTTAAGTCTAAGACCTTCTTaGAATCTTCCAAAGCATCATCAAAATATCCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: HLEIQDLSLRPS*NLPKHHQNIPA Trigger: GGCTGGGATATTTTGATGATGCTTTGGAAGATTTCAAGAAGGTCTTAGACTTAAATCCTGGATTTCAAGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000333610.4 ENST00000495698.1 |
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| CDS TCA 72 bp | CATCTTGAAATCCAGGATTTAAGTCTAAGACCTTCTTaGAATCTTCCAAAGCATCATCAAAATATCCTCCCG | + |
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Preference number: 6 (lower is better) Translates to: HLEIQDLSLRPS*NLPKHHQNILP Trigger: CGGGAGGATATTTTGATGATGCTTTGGAAGATTTCAAGAAGGTCTTAGACTTAAATCCTGGATTTCAAGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000402414.1 |
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| CDS CCA 72 bp | GACGACTTGATATTAAGTAACTATGTGATGATGACATaGTGGTTCCTTCTGAAACATCCATGGATGAATACA | + |
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Preference number: 6 (lower is better) Translates to: DDLILSNYVMMT*WFLLKHPWMNT Trigger: TGTATTCATCCATGGATGTTTCAGAAGGAACCACCATGTCATCATCACATAGTTACTTAATATCAAGTCGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431392.1 |
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| CDS CAA 72 bp | TTATTAGTCGATCAGAATGGTTCCAACACTGACGACTaGATATTAAGTAACTATGTGATGATGACATGGTGG | + |
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Preference number: 6 (lower is better) Translates to: LLVDQNGSNTDD*ILSNYVMMTWW Trigger: CCACCATGTCATCATCACATAGTTACTTAATATCAAGTCGTCAGTGTTGGAACCATTCTGATCGACTAATAA 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431392.1 |
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