RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTC31 (Homo sapiens)

Ensembl gene IDs: ENSG00000115282

Ensembl transcript IDs: ENST00000233623.11, ENST00000410003.5, ENST00000414247.1, ENST00000424122.5, ENST00000442235.6, ENST00000449459.5, ENST00000459957.5, ENST00000463189.1, ENST00000463704.5, ENST00000464241.5, ENST00000489152.5, ENST00000491252.5

Found 694 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGAGGGCACCTGAGGGAAGGTAGGCCTGAGGGTGCCAGCTCAGCATaGGGAAGTGGCTGGAGGGCCCCAGGTGACAGAGGTGGTGCACAG +
Preference number: 1 (lower is better)
Translates to: RGHLREGRPEGASSA*GSGWRAPGDRGGAQ
Trigger: CTGTGCACCACCTCTGTCACCTGGGGCCCTCCAGCCACTTCCCCATGCTGAGCTGGCACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000449459.5
3UTR CCA 90 bp CCGCCTCAGCATGACAGTGTGCCTGGCCCCCTTACCAGTGTGAGGTaGAGAAGGCAAGAGCGGAGCTCTCGGGCTGCGTCAGGCTGGGAC +
Preference number: 1 (lower is better)
Translates to: PPQHDSVPGPLTSVR*RRQERSSRAASGWD
Trigger: GTCCCAGCCTGACGCAGCCCGAGAGCTCCGCTCTTGCCTTCTCCACCTCACACTGGTAAGGGGGCCAGGCACACTGTCATGCTGAGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
3UTR CCA 90 bp CCAGTGCTGGGGTGGAGAAACAGAGTGGCCAAGGTTGTAGCAGCTTaGGCACCTGCTGAGGCCCCATTCAGCGGGAGAGCCACCAGTTGG +
Preference number: 1 (lower is better)
Translates to: PVLGWRNRVAKVVAA*APAEAPFSGRATSW
Trigger: CCAACTGGTGGCTCTCCCGCTGAATGGGGCCTCAGCAGGTGCCCAAGCTGCTACAACCTTGGCCACTCTGTTTCTCCACCCCAGCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR TCA 90 bp CGTAGGGTAAGGGCCACCTGGGCATCAGCCAGGGCCCACGCTGGCTaGCCCAACCGCTCATGGCAGAAGGAACGATTTCCAAATAACCGG +
Preference number: 1 (lower is better)
Translates to: RRVRATWASARAHAG*PNRSWQKERFPNNR
Trigger: CCGGTTATTTGGAAATCGTTCCTTCTGCCATGAGCGGTTGGGTCAGCCAGCGTGGGCCCTGGCTGATGCCCAGGTGGCCCTTACCCTACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424122.5
3UTR GCA 90 bp CCCCACCAAGGGATATATACATGGCCCTGCCCTATGAGGGACCGGTaGCCCCTCATCTGGCCTGAGACAGATGCTGGAGCCCAAGTCCCA +
Preference number: 1 (lower is better)
Translates to: PHQGIYTWPCPMRDR*PLIWPETDAGAQVP
Trigger: TGGGACTTGGGCTCCAGCATCTGTCTCAGGCCAGATGAGGGGGCACCGGTCCCTCATAGGGCAGGGCCATGTATATATCCCTTGGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
3UTR GCA 90 bp ACCCTGCAGTGTGAGGTGGAGAAGGCAAGAGCGGAGCTCTCGGGCTaGGTCAGGCTGGGACCCACCTCTCAGAGTTTCCTGAAACACAGC +
Preference number: 1 (lower is better)
Translates to: TLQCEVEKARAELSG*VRLGPTSQSFLKHS
Trigger: GCTGTGTTTCAGGAAACTCTGAGAGGTGGGTCCCAGCCTGACGCAGCCCGAGAGCTCCGCTCTTGCCTTCTCCACCTCACACTGCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424122.5
3UTR TCA 90 bp GTGGAGAAACAGAGTGGCCAAGGTTGTAGCAGCTTGGGCACCTGCTaGGGCCCCATTCAGCGGGAGAGCCACCAGTTGGGAGTGTGGACA +
Preference number: 1 (lower is better)
Translates to: VEKQSGQGCSSLGTC*GPIQRESHQLGVWT
Trigger: TGTCCACACTCCCAACTGGTGGCTCTCCCGCTGAATGGGGCCTCAGCAGGTGCCCAAGCTGCTACAACCTTGGCCACTCTGTTTCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR TCA 90 bp CGTAGGGTAAGGGCCACCTGGGCATCAGCCAGGGCCCACGCTGGCTaGCCCAACCGCTCATGGCAGAAGGAACGATTTCCAAATAACCTG +
Preference number: 1 (lower is better)
Translates to: RRVRATWASARAHAG*PNRSWQKERFPNNL
Trigger: CAGGTTATTTGGAAATCGTTCCTTCTGCCATGAGCGGTTGGGTCAGCCAGCGTGGGCCCTGGCTGATGCCCAGGTGGCCCTTACCCTACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
3UTR GCA 90 bp CCTTACCAGTGTGAGGTGGAGAAGGCAAGAGCGGAGCTCTCGGGCTaGGTCAGGCTGGGACCCACCTCTCAGAGTTTCCTGAAACACAGC +
Preference number: 1 (lower is better)
Translates to: PYQCEVEKARAELSG*VRLGPTSQSFLKHS
Trigger: GCTGTGTTTCAGGAAACTCTGAGAGGTGGGTCCCAGCCTGACGCAGCCCGAGAGCTCCGCTCTTGCCTTCTCCACCTCACACTGGTAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
3UTR TCA 90 bp TGGTATTGCAGTCCCAGCCAATTCTCCCTGATACCCGCCTCAGCATaGCAGTGTGCCTGGCCCCCTTACCAGTGTGAGGTGGAGAAGGCA +
Preference number: 1 (lower is better)
Translates to: WYCSPSQFSLIPASA*QCAWPPYQCEVEKA
Trigger: TGCCTTCTCCACCTCACACTGGTAAGGGGGCCAGGCACACTGTCATGCTGAGGCGGGTATCAGGGAGAATTGGCTGGGACTGCAATACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
3UTR TCA 90 bp CTTAGCCACCTGAGGCTTGGTATTGCAGTCCCAGCCAATTCTCCCTaGTACCCGCCTCAGCATGACAGTGTGCCTGGCCCCCTTACCAGT +
Preference number: 1 (lower is better)
Translates to: LSHLRLGIAVPANSP*YPPQHDSVPGPLTS
Trigger: ACTGGTAAGGGGGCCAGGCACACTGTCATGCTGAGGCGGGTATCAGGGAGAATTGGCTGGGACTGCAATACCAAGCCTCAGGTGGCTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
3UTR CCA 90 bp AGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATaGCCCTGCCCTATGAGGGACCGGTGCCCCCTCATCTGGCCTGAG +
Preference number: 1 (lower is better)
Translates to: SELSPHYVPHQGIYT*PCPMRDRCPLIWPE
Trigger: CTCAGGCCAGATGAGGGGGCACCGGTCCCTCATAGGGCAGGGCCATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
3UTR TCA 90 bp GGCCCCTTGTGTCCTCCTGGCAAGAGAGTCCACTGCAGGCCATCTTaGGCTCTCTCCTGTTCCCACAAAGTTTCCTCTTTCCCTCTCCCA +
Preference number: 1 (lower is better)
Translates to: GPLCPPGKRVHCRPS*ALSCSHKVSSFPLP
Trigger: TGGGAGAGGGAAAGAGGAAACTTTGTGGGAACAGGAGAGAGCTCAAGATGGCCTGCAGTGGACTCTCTTGCCAGGAGGACACAAGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449459.5
3UTR TCA 90 bp TCCCAAATGCAAACCCTTGGTGAATATTCTAGCAGTGAGAGGAGGTaGGCACCAGACCACTGGACAAGAGAGGTCAGAGTCATACATAGC +
Preference number: 1 (lower is better)
Translates to: SQMQTLGEYSSSERR*APDHWTREVRVIHS
Trigger: GCTATGTATGACTCTGACCTCTCTTGTCCAGTGGTCTGGTGCTCACCTCCTCTCACTGCTAGAATATTCACCAAGGGTTTGCATTTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR TCA 90 bp GTCGTGTGCTGGGCTAAGATTTCGCATTCCATCTTTGCAGCTCTATaGGACAGGCATCATTATTATCCTCATTTTGCAGGTGAAAAAGCA +
Preference number: 1 (lower is better)
Translates to: VVCWAKISHSIFAAL*DRHHYYPHFAGEKA
Trigger: TGCTTTTTCACCTGCAAAATGAGGATAATAATGATGCCTGTCTCATAGAGCTGCAAAGATGGAATGCGAAATCTTAGCCCAGCACACGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449459.5
3UTR-3UTR TCA 90 bp GTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCCCCGGGGCCAGCCAGGCCGTAAGCTTGGGCACCTGCTaGGGCCCCATTCAGCGGGAG +
Preference number: 2 (lower is better)
Translates to: VPSRPCPGGRGPGASQAVSLGTC*GPIQRE
Trigger: CTCCCGCTGAATGGGGCCTCAGCAGGTGCCCAAGCT...TACGGCCTGGCTGGCCCCGGGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR GCA 90 bp GTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCCCCGGGGCCAGCCAGGCCGTAGTCCCATCAAGGCCTTaGCCAGGCGGAAGAGGCCCC +
Preference number: 2 (lower is better)
Translates to: VPSRPCPGGRGPGASQAVVPSRP*PGGRGP
Trigger: GGGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGAC...TACGGCCTGGCTGGCCCCGGGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000449459.5
3UTR-3UTR CCA 90 bp TGTAGTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCCCCGGGGCCAGCCAGGCGCCAGACCCCTGCCTTaGGGCTCCTGGTTCAGTCCC +
Preference number: 2 (lower is better)
Translates to: CSPIKALPRRKRPRGQPGARPLP*GSWFSP
Trigger: GGGACTGAACCAGGAGCCCCAAGGCAGGGGTCTGGC...GCCTGGCTGGCCCCGGGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGACTACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
3UTR-3UTR TCA 90 bp GTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCCCCGGGGCCAGCCAGGCCGTACCAGCCAATTCTCCCTaGTACCCGCCTCAGCATGAC +
Preference number: 2 (lower is better)
Translates to: VPSRPCPGGRGPGASQAVPANSP*YPPQHD
Trigger: GTCATGCTGAGGCGGGTATCAGGGAGAATTGGCTGG...TACGGCCTGGCTGGCCCCGGGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
3UTR-3UTR GCA 90 bp TGTAGTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCCCCGGGGCCAGCCAGGCGGCTCCCCACAGTACTaGTCCAAACGCTCCTGTCGC +
Preference number: 2 (lower is better)
Translates to: CSPIKALPRRKRPRGQPGGSPQY*SKRSCR
Trigger: GCGACAGGAGCGTTTGGAGCAGTACTGTGGGGAGCC...GCCTGGCTGGCCCCGGGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGACTACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
3UTR-3UTR GCA 90 bp TGTAGTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCCCCGGGGCCAGCCAGGCTCCCTTTGGCTCCCCTaGACCCTCCAGCCATGCTCT +
Preference number: 2 (lower is better)
Translates to: CSPIKALPRRKRPRGQPGSLWLP*TLQPCS
Trigger: AGAGCATGGCTGGAGGGTGCAGGGGAGCCAAAGGGA...GCCTGGCTGGCCCCGGGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGACTACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449459.5
3UTR-3UTR CCA 90 bp GTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCCCCGGGGCCAGCCAGGCCGTAAAGGTTGTAGCAGCTTaGGCACCTGCTGAGGCCCCA +
Preference number: 2 (lower is better)
Translates to: VPSRPCPGGRGPGASQAVKVVAA*APAEAP
Trigger: TGGGGCCTCAGCAGGTGCCCAAGCTGCTACAACCTT...TACGGCCTGGCTGGCCCCGGGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CCA 90 bp GTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCCCCGGGGCCAGCCAGGCCGTAGTTTCCAGGGCTGGATaGGGGGCTCTCATCTCCATC +
Preference number: 2 (lower is better)
Translates to: VPSRPCPGGRGPGASQAVVSRAG*GALISI
Trigger: GATGGAGATGAGAGCCCCCCATCCAGCCCTGGAAAC...TACGGCCTGGCTGGCCCCGGGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
3UTR-3UTR GCA 90 bp GTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCCCCGGGGCCAGCCAGGCCGTAAAGCAGGAGAGCCCATaGCTCTCATTCCACCCATCC +
Preference number: 2 (lower is better)
Translates to: VPSRPCPGGRGPGASQAVKQESP*LSFHPS
Trigger: GGATGGGTGGAATGAGAGGCATGGGCTCTCCTGCTT...TACGGCCTGGCTGGCCCCGGGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
3UTR-3UTR TCA 90 bp CCCAGACCTATTACCTGTAGTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCCCAGGGCCCACGCTGGCTaGCCCAACCGCTCATGGCAG +
Preference number: 2 (lower is better)
Translates to: PRPITCSPIKALPRRKRPRAHAG*PNRSWQ
Trigger: CTGCCATGAGCGGTTGGGTCAGCCAGCGTGGGCCCT...GGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGACTACAGGTAATAGGTCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
3UTR-3UTR TCA 90 bp CTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGGTGCCAGCTCAGCATGGGGACTGGAGGGCCCCAGGTaGCAGAGGTGGTGCACAGAT +
Preference number: 2 (lower is better)
Translates to: LRGHLREGRPEGASSAWGLEGPR*QRWCTD
Trigger: ATCTGTGCACCACCTCTGTCACCTGGGGCCCTCCAG...TCCCCATGCTGAGCTGGCACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000449459.5
3UTR-3UTR GCA 90 bp GTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCCCCGGGGCCAGCCAGGCCGTAGGATTCCAGAACCACTaGACCAGATGGCCTGTGAGA +
Preference number: 2 (lower is better)
Translates to: VPSRPCPGGRGPGASQAVGFQNH*TRWPVR
Trigger: TCTCACAGGCCATCTGGTGCAGTGGTTCTGGAATCC...TACGGCCTGGCTGGCCCCGGGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449459.5
3UTR-3UTR CCA 90 bp TGTAGTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCCCCGGGGCCAGCCAGGCAATAACCGGTGGTCCTaGGGGTTGAGCTTCAAGGCC +
Preference number: 2 (lower is better)
Translates to: CSPIKALPRRKRPRGQPGNNRWS*GLSFKA
Trigger: GGCCTTGAAGCTCAACCCCCAGGACCACCGGTTATT...GCCTGGCTGGCCCCGGGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGACTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424122.5
3UTR CAA 90 bp GCTCTCTTCCTCTTGACCCATCTTCTGGAGGGCCAGACCCCTGCCTaGGGGCTCCTGGTTCAGTCCCTTCTCTCTGCGGGCACTGAGGGG +
Preference number: 2 (lower is better)
Translates to: ALFLLTHLLEGQTPA*GLLVQSLLSAGTEG
Trigger: CCCCTCAGTGCCCGCAGAGAGAAGGGACTGAACCAGGAGCCCCAAGGCAGGGGTCTGGCCCTCCAGAAGATGGGTCAAGAGGAAGAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
3UTR-3UTR CCA 90 bp TGGTCCTGGGGGTTGAGCTTCAAGGCCTGGGTGAAGAGGACCACGGCCTCATGGCGGGCTGCGTCAGGCTaGGACCCACCTCTCAGAGTT +
Preference number: 2 (lower is better)
Translates to: WSWGLSFKAWVKRTTASWRAASG*DPPLRV
Trigger: AACTCTGAGAGGTGGGTCCCAGCCTGACGCAGCCCG...CCATGAGGCCGTGGTCCTCTTCACCCAGGCCTTGAAGCTCAACCCCCAGGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
3UTR-3UTR TCA 90 bp CTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGGTGCCAGCTCAGCATGGGGAAGCAGTGAGAGGAGGTaGGCACCAGACCACTGGACA +
Preference number: 2 (lower is better)
Translates to: LRGHLREGRPEGASSAWGSSERR*APDHWT
Trigger: TGTCCAGTGGTCTGGTGCTCACCTCCTCTCACTGCT...TCCCCATGCTGAGCTGGCACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR GCA 90 bp CACCAAGGGATATATACATGGCCCTGCCCTATGAGGGACCGGTGCCCCCTCATCGGAGGGCCAGACCCCTaGCTTGGGGCTCCTGGTTCA +
Preference number: 2 (lower is better)
Translates to: HQGIYTWPCPMRDRCPLIGGPDP*LGAPGS
Trigger: TGAACCAGGAGCCCCAAGGCAGGGGTCTGGCCCTCC...GATGAGGGGGCACCGGTCCCTCATAGGGCAGGGCCATGTATATATCCCTTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424122.5
3UTR-3UTR CCA 90 bp CTACCGGTGGTCCTGGGGGTTGAGCTTCAAGGCCTGGGTGAAGAGGACCACGGCCTGCCTTGGGGCTCCTaGTTCAGTCCCTTCTCTCTG +
Preference number: 2 (lower is better)
Translates to: LPVVLGVELQGLGEEDHGLPWGS*FSPFSL
Trigger: CAGAGAGAAGGGACTGAACCAGGAGCCCCAAGGCAG...GCCGTGGTCCTCTTCACCCAGGCCTTGAAGCTCAACCCCCAGGACCACCGGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449459.5
3UTR-3UTR TCA 90 bp GCTGAGGCCCCATTCAGCGGGAGAGCCACCAGTTGGGAGTGTGGACATGTATGGGGCACGAGCTGGGGCTaGGAAGAGGTGAGCATCCAT +
Preference number: 2 (lower is better)
Translates to: AEAPFSGRATSWECGHVWGTSWG*EEVSIH
Trigger: ATGGATGCTCACCTCTTCTCAGCCCCAGCTCGTGCC...CCATACATGTCCACACTCCCAACTGGTGGCTCTCCCGCTGAATGGGGCCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR TCA 90 bp AGGGATATATACATGGCCCTGCCCTATGAGGGACCGGTGCCCCCTCATCTGGCCCAGATTCCTCCTCGCTaGCCCTGCAGTGTGAGGTGG +
Preference number: 2 (lower is better)
Translates to: RDIYMALPYEGPVPPHLAQIPPR*PCSVRW
Trigger: CCACCTCACACTGCAGGGTCAGCGAGGAGGAATCTG...GGCCAGATGAGGGGGCACCGGTCCCTCATAGGGCAGGGCCATGTATATATCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424122.5
3UTR-3UTR CCA 90 bp TCCAGCCCCAGACCTATTACCTGTAGTCCCATCAAGGCCTTGCCCAGGCGGAAGCGGGCTGCGTCAGGCTaGGACCCACCTCTCAGAGTT +
Preference number: 2 (lower is better)
Translates to: SSPRPITCSPIKALPRRKRAASG*DPPLRV
Trigger: AACTCTGAGAGGTGGGTCCCAGCCTGACGCAGCCCG...CTTCCGCCTGGGCAAGGCCTTGATGGGACTACAGGTAATAGGTCTGGGGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
3UTR-3UTR TCA 90 bp AGCCCCAGACCTATTACCTGTAGTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGGCCCCCTTACCAGTGTaGGGTGGAGAAGGCAAGAGC +
Preference number: 2 (lower is better)
Translates to: SPRPITCSPIKALPRRKRAPLPV*GGEGKS
Trigger: GCTCTTGCCTTCTCCACCTCACACTGGTAAGGGGGC...CCTCTTCCGCCTGGGCAAGGCCTTGATGGGACTACAGGTAATAGGTCTGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
3UTR-3UTR TCA 90 bp TGGGGTGGCTTCGGTGACATGAAGGATAATGCAAGAGTGGAGACAGGCCAGGGGTGCTTCGAGGGCACCTaGGGGAAGGTAGGCCTGAGG +
Preference number: 2 (lower is better)
Translates to: WGGFGDMKDNARVETGQGCFEGT*GKVGLR
Trigger: CCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCA...CCCCTGGCCTGTCTCCACTCTTGCATTATCCTTCATGTCACCGAAGCCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CCA 90 bp CCCACAGTACTGCTCCAAACGCTCCTGTCGCTTCCGTTCCTTTTGACGCTGCAAAGCCAGGGCCCACGCTaGCTGACCCAACCGCTCATG +
Preference number: 2 (lower is better)
Translates to: PTVLLQTLLSLPFLLTLQSQGPR*LTQPLM
Trigger: CATGAGCGGTTGGGTCAGCCAGCGTGGGCCCTGGCT...TTGCAGCGTCAAAAGGAACGGAAGCGACAGGAGCGTTTGGAGCAGTACTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449459.5
3UTR-3UTR CCA 90 bp GCTGAGGCCCCATTCAGCGGGAGAGCCACCAGTTGGGAGTGTGGACATGTATGGTTGAGCTTCAAGGCCTaGGTGAAGAGGACCACGGCC +
Preference number: 2 (lower is better)
Translates to: AEAPFSGRATSWECGHVWLSFKA*VKRTTA
Trigger: GGCCGTGGTCCTCTTCACCCAGGCCTTGAAGCTCAA...CCATACATGTCCACACTCCCAACTGGTGGCTCTCCCGCTGAATGGGGCCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424122.5
3UTR-3UTR TCA 90 bp CGGAAGAGGCCCCGGGGCCAGCCAGGCCGTAGGGTAAGGGCCACCTGGGCATCATCTCAAAATATGCAGTaGACTGTCACCACACTATGT +
Preference number: 2 (lower is better)
Translates to: RKRPRGQPGRRVRATWASSQNMQ*TVTTLC
Trigger: ACATAGTGTGGTGACAGTTCACTGCATATTTTGAGA...TGATGCCCAGGTGGCCCTTACCCTACGGCCTGGCTGGCCCCGGGGCCTCTTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR TCA 90 bp AACTTTGCCAGTTCCTGGCTCTGTTGTAAGGCAGCTGCCAGCAGTCCCGGAGATGCCCCCTCAGCACTGTaGCCCCGTTCCTGTACACCA +
Preference number: 2 (lower is better)
Translates to: NFASSWLCCKAAASSPGDAPSAL*PRSCTP
Trigger: TGGTGTACAGGAACGGGGTCACAGTGCTGAGGGGGC...ATCTCCGGGACTGCTGGCAGCTGCCTTACAACAGAGCCAGGAACTGGCAAAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424122.5
3UTR-3UTR CCA 90 bp CCTTTCTCTCATCAGAAGCTTCCCCATGGCAAGAGGAATGACTGCCAGGGCATCAGGGTAAGGGCCACCTaGGCATCAGCCAGGGCCCAC +
Preference number: 2 (lower is better)
Translates to: PFSHQKLPHGKRNDCQGIRVRAT*ASARAH
Trigger: GTGGGCCCTGGCTGATGCCCAGGTGGCCCTTACCCT...GATGCCCTGGCAGTCATTCCTCTTGCCATGGGGAAGCTTCTGATGAGAGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR TCA 90 bp CTGGTACCCAACTTTGCCAGTTCCTGGCTCTGTTGTAAGGCAGCTGCCAGCAGTCAGCAGCTGCCTCTCTaGAGCGCTTTGGTCCCAGAG +
Preference number: 2 (lower is better)
Translates to: LVPNFASSWLCCKAAASSQQLPL*SALVPE
Trigger: CTCTGGGACCAAAGCGCTTCAGAGAGGCAGCTGCTG...ACTGCTGGCAGCTGCCTTACAACAGAGCCAGGAACTGGCAAAGTTGGGTACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449459.5
3UTR-3UTR TCA 90 bp ACTTTGCCAGTTCCTGGCTCTGTTGTAAGGCAGCTGCCAGCAGTCCCGGAGATGCCCTCCTTAGCCACCTaGGGCTTGGTATTGCAGTCC +
Preference number: 2 (lower is better)
Translates to: TLPVPGSVVRQLPAVPEMPSLAT*GLVLQS
Trigger: GGACTGCAATACCAAGCCTCAGGTGGCTAAGGAGGG...CATCTCCGGGACTGCTGGCAGCTGCCTTACAACAGAGCCAGGAACTGGCAAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449459.5
3UTR-3UTR GCA 90 bp GTATTGCAGTCCCAGCCAATTCTCCCTGATACCCGCCTCAGCATGACAGTGTGCCAGCAGTCCCGGAGATaGCTTTGGACTCTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: VLQSQPILPDTRLSMTVCQQSRR*LWTLLG
Trigger: CCCCAGCAGAGTCCAAAGGCATCTCCGGGACTGCTG...GCACACTGTCATGCTGAGGCGGGTATCAGGGAGAATTGGCTGGGACTGCAATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449459.5
3UTR-3UTR CCA 90 bp AGAGGAGGTGAGCACCAGACCACTGGACAAGAGAGGTCAGAGTCATACATAGCAAGGGTAAGGGCCACCTaGGCATCAGCCAGGGCCCAC +
Preference number: 2 (lower is better)
Translates to: RGGEHQTTGQERSESYIARVRAT*ASARAH
Trigger: GTGGGCCCTGGCTGATGCCCAGGTGGCCCTTACCCT...TGCTATGTATGACTCTGACCTCTCTTGTCCAGTGGTCTGGTGCTCACCTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR TCA 90 bp CCCATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATAGCTTGGGCACCTGCTaGGGCCCCATTCAGCGGGAG +
Preference number: 2 (lower is better)
Translates to: PIQGDPAGNGRLHPATQYSLGTC*GPIQRE
Trigger: CTCCCGCTGAATGGGGCCTCAGCAGGTGCCCAAGCT...ATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR TCA 90 bp GTGAATATTCTAGCAGTGAGAGGAGGTGAGCACCAGACCACTGGACAAGAGAGGTGCTTCGAGGGCACCTaGGGGAAGGTAGGCCTGAGG +
Preference number: 2 (lower is better)
Translates to: VNILAVRGGEHQTTGQERCFEGT*GKVGLR
Trigger: CCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCA...CCTCTCTTGTCCAGTGGTCTGGTGCTCACCTCCTCTCACTGCTAGAATATTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR TCA 90 bp ACAGCAGCTGCCTCTCTGAAGCGCTTTGGTCCCAGAGGGATCAGAAAGAAAAGATCTCTCTGCGGGCACTaGGGGGCCAATCCCCAACCT +
Preference number: 2 (lower is better)
Translates to: TAAASLKRFGPRGIRKKRSLCGH*GANPQP
Trigger: AGGTTGGGGATTGGCCCCTCAGTGCCCGCAGAGAGA...TCTTTTCTTTCTGATCCCTCTGGGACCAAAGCGCTTCAGAGAGGCAGCTGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449459.5
3UTR-3UTR GCA 90 bp GTGAATATTCTAGCAGTGAGAGGAGGTGAGCACCAGACCACTGGACAAGAGAGGGAGTCCTCAACACTCTaGCCTGCCCTGGCCAAGCCC +
Preference number: 2 (lower is better)
Translates to: VNILAVRGGEHQTTGQERESSTL*PALAKP
Trigger: GGGCTTGGCCAGGGCAGGGCAGAGTGTTGAGGACTC...CCTCTCTTGTCCAGTGGTCTGGTGCTCACCTCCTCTCACTGCTAGAATATTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410003.5
3UTR-3UTR GCA 90 bp TTAACATGGGGAAAGGCTAATTACCATGCCCAGTGCTGGGGTGGAGAAACAGAGGTCCCATCAAGGCCTTaGCCAGGCGGAAGAGGCCCC +
Preference number: 2 (lower is better)
Translates to: LTWGKANYHAQCWGGETEVPSRP*PGGRGP
Trigger: GGGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGAC...CTCTGTTTCTCCACCCCAGCACTGGGCATGGTAATTAGCCTTTCCCCATGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR GCA 90 bp TGGACAAGAGAGGTCAGAGTCATACATAGCAATCTGGACAGGAAATGGCATGAGGCGGAGCTCTCGGGCTaGGTCAGGCTGGGACCCACC +
Preference number: 2 (lower is better)
Translates to: WTREVRVIHSNLDRKWHEAELSG*VRLGPT
Trigger: GGTGGGTCCCAGCCTGACGCAGCCCGAGAGCTCCGC...CTCATGCCATTTCCTGTCCAGATTGCTATGTATGACTCTGACCTCTCTTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR GCA 90 bp ACTGCTCCAAACGCTCCTGTCGCTTCCGTTCCTTTTGACGCTGCAATAGTAATGGGAGGGCCAGACCCCTaGCTTGGGGCTCCTGGTTCA +
Preference number: 2 (lower is better)
Translates to: TAPNAPVASVPFDAAIVMGGPDP*LGAPGS
Trigger: TGAACCAGGAGCCCCAAGGCAGGGGTCTGGCCCTCC...CATTACTATTGCAGCGTCAAAAGGAACGGAAGCGACAGGAGCGTTTGGAGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449459.5
3UTR-3UTR CCA 90 bp TTCCTGAAACACAGCAGCTGCCTCTCTGAAGCGCTTTGGTCCCAGAGGGATCAGCCCCTTGTGTCCTCCTaGCAAGAGAGTCCACTGCAG +
Preference number: 2 (lower is better)
Translates to: FLKHSSCLSEALWSQRDQPLVSS*QESPLQ
Trigger: CTGCAGTGGACTCTCTTGCCAGGAGGACACAAGGGG...CTGATCCCTCTGGGACCAAAGCGCTTCAGAGAGGCAGCTGCTGTGTTTCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449459.5
3UTR-3UTR TCA 90 bp TTAACATGGGGAAAGGCTAATTACCATGCCCAGTGCTGGGGTGGAGAAACAGAGGCCCCCTCAGCACTGTaGCCCCGTTCCTGTACACCA +
Preference number: 2 (lower is better)
Translates to: LTWGKANYHAQCWGGETEAPSAL*PRSCTP
Trigger: TGGTGTACAGGAACGGGGTCACAGTGCTGAGGGGGC...CTCTGTTTCTCCACCCCAGCACTGGGCATGGTAATTAGCCTTTCCCCATGTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR TCA 90 bp GTGAATATTCTAGCAGTGAGAGGAGGTGAGCACCAGACCACTGGACAAGAGAGGGGCACGAGCTGGGGCTaGGAAGAGGTGAGCATCCAT +
Preference number: 2 (lower is better)
Translates to: VNILAVRGGEHQTTGQERGTSWG*EEVSIH
Trigger: ATGGATGCTCACCTCTTCTCAGCCCCAGCTCGTGCC...CCTCTCTTGTCCAGTGGTCTGGTGCTCACCTCCTCTCACTGCTAGAATATTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR TCA 90 bp CTTCCCCATGGCAAGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGAAGCTTGGGCACCTGCTaGGGCCCCATTCAGCGGGAG +
Preference number: 2 (lower is better)
Translates to: LPHGKRNDCQGIINYGSRSLGTC*GPIQRE
Trigger: CTCCCGCTGAATGGGGCCTCAGCAGGTGCCCAAGCT...TCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCTTGCCATGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR TCA 90 bp TCTCTCCTGTTTCCAGCCCCAGACCTATTACCTGTAGTCCCATCAAGGCCTTGCGCTCTCATCTCCATCTaGGGTAGTGCTGGCCTTGGG +
Preference number: 2 (lower is better)
Translates to: SLLFPAPDLLPVVPSRPCALISI*GSAGLG
Trigger: CCCAAGGCCAGCACTACCTCAGATGGAGATGAGAGC...GCAAGGCCTTGATGGGACTACAGGTAATAGGTCTGGGGCTGGAAACAGGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449459.5
3UTR-3UTR TCA 90 bp GAGGCCTCATGTAAGGAGGCAGATTCCTACCTAGGCAGCACAGTAGGATTCCAGTCACCACACTGTCCCTaGACTGGGTTTCCAGGGCTG +
Preference number: 2 (lower is better)
Translates to: EASCKEADSYLGSTVGFQSPHCP*TGFPGL
Trigger: CAGCCCTGGAAACCCAGTTCAGGGACAGTGTGGTGA...CTGGAATCCTACTGTGCTGCCTAGGTAGGAATCTGCCTCCTTACATGAGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449459.5
3UTR-3UTR CCA 90 bp CAAGAGAGGTCAGAGTCATACATAGCAATCTGGACAGGAAATGGCATGAGGAGCAGCCAGGGCCCACGCTaGCTGACCCAACCGCTCATG +
Preference number: 2 (lower is better)
Translates to: QERSESYIAIWTGNGMRSSQGPR*LTQPLM
Trigger: CATGAGCGGTTGGGTCAGCCAGCGTGGGCCCTGGCT...GCTCCTCATGCCATTTCCTGTCCAGATTGCTATGTATGACTCTGACCTCTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CCA 90 bp AACTTTGCCAGTTCCTGGCTCTGTTGTAAGGCAGCTGCCAGCAGTCCCGGAGATACACTGTCCCTGAACTaGGTTTCCAGGGCTGGATGG +
Preference number: 2 (lower is better)
Translates to: NFASSWLCCKAAASSPGDTLSLN*VSRAGW
Trigger: CCATCCAGCCCTGGAAACCCAGTTCAGGGACAGTGT...ATCTCCGGGACTGCTGGCAGCTGCCTTACAACAGAGCCAGGAACTGGCAAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
3UTR-3UTR TCA 90 bp CCCAGACCTATTACCTGTAGTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCCCGTACCACAACCATTGTaGCACTTTGGTACTAGAAGC +
Preference number: 2 (lower is better)
Translates to: PRPITCSPIKALPRRKRPVPQPL*HFGTRS
Trigger: GCTTCTAGTACCAAAGTGTCACAATGGTTGTGGTAC...GGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGACTACAGGTAATAGGTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
3UTR-3UTR GCA 90 bp GTATTGCAGTCCCAGCCAATTCTCCCTGATACCCGCCTCAGCATGACAGTGTGCATATATACATGGCCCTaGCCTATGAGGGACCGGTGC +
Preference number: 2 (lower is better)
Translates to: VLQSQPILPDTRLSMTVCIYTWP*PMRDRC
Trigger: GCACCGGTCCCTCATAGGGCAGGGCCATGTATATAT...GCACACTGTCATGCTGAGGCGGGTATCAGGGAGAATTGGCTGGGACTGCAATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410003.5
3UTR-3UTR GCA 90 bp GCTGAGGCCCCATTCAGCGGGAGAGCCACCAGTTGGGAGTGTGGACATGTATGGGGCAAGAGGAATGACTaGCAGGGCATCATTAACTAT +
Preference number: 2 (lower is better)
Translates to: AEAPFSGRATSWECGHVWGKRND*QGIINY
Trigger: ATAGTTAATGATGCCCTGGCAGTCATTCCTCTTGCC...CCATACATGTCCACACTCCCAACTGGTGGCTCTCCCGCTGAATGGGGCCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR GCA 90 bp GTATTGCAGTCCCAGCCAATTCTCCCTGATACCCGCCTCAGCATGACAGTGTGCGCCAATCCCCAACCTTaGGCAAAGCCAGAGACACAA +
Preference number: 2 (lower is better)
Translates to: VLQSQPILPDTRLSMTVCANPQP*AKPETQ
Trigger: TTGTGTCTCTGGCTTTGCGCAAGGTTGGGGATTGGC...GCACACTGTCATGCTGAGGCGGGTATCAGGGAGAATTGGCTGGGACTGCAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449459.5
3UTR-3UTR CCA 90 bp GACAGACCCATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACAAAGGTTGTAGCAGCTTaGGCACCTGCTGAGGCCCCA +
Preference number: 2 (lower is better)
Translates to: DRPIQGDPAGNGRLHPATKVVAA*APAEAP
Trigger: TGGGGCCTCAGCAGGTGCCCAAGCTGCTACAACCTT...TGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGATGGGTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR TCA 90 bp GACAGACCCATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACCAAGCTCTAGTTGGTaGATGAGGTCCCCTGGACCA +
Preference number: 2 (lower is better)
Translates to: DRPIQGDPAGNGRLHPATPSSSW*MRSPGP
Trigger: TGGTCCAGGGGACCTCATTCACCAACTAGAGCTTGG...TGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGATGGGTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR TCA 90 bp CCCATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATAGCAGTGAGAGGAGGTaGGCACCAGACCACTGGACA +
Preference number: 2 (lower is better)
Translates to: PIQGDPAGNGRLHPATQYSSERR*APDHWT
Trigger: TGTCCAGTGGTCTGGTGCTCACCTCCTCTCACTGCT...ATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR TCA 90 bp AGGAACCAGCTAGGGGAAGCTGCCAGGATCTTAGACGTGAAATTAAAAGGAGATATACCCGCCTCAGCATaGCAGTGTGCCTGGCCCCCT +
Preference number: 2 (lower is better)
Translates to: RNQLGEAARILDVKLKGDIPASA*QCAWPP
Trigger: AGGGGGCCAGGCACACTGTCATGCTGAGGCGGGTAT...ATCTCCTTTTAATTTCACGTCTAAGATCCTGGCAGCTTCCCCTAGCTGGTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000410003.5
3UTR-3UTR TCA 90 bp ATGGTAGAAACCATTTTGAGCAAAGCTGGTACCCAACTTTGCCAGTTCCTGGCTATACCCGCCTCAGCATaGCAGTGTGCCTGGCCCCCT +
Preference number: 2 (lower is better)
Translates to: MVETILSKAGTQLCQFLAIPASA*QCAWPP
Trigger: AGGGGGCCAGGCACACTGTCATGCTGAGGCGGGTAT...AGCCAGGAACTGGCAAAGTTGGGTACCAGCTTTGCTCAAAATGGTTTCTACCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449459.5
3UTR-3UTR TCA 90 bp AGGAACCAGCTAGGGGAAGCTGCCAGGATCTTAGACGTGAAATTAAAAGGAGATCTGGAGGGCCCCAGGTaGCAGAGGTGGTGCACAGAT +
Preference number: 2 (lower is better)
Translates to: RNQLGEAARILDVKLKGDLEGPR*QRWCTD
Trigger: ATCTGTGCACCACCTCTGTCACCTGGGGCCCTCCAG...ATCTCCTTTTAATTTCACGTCTAAGATCCTGGCAGCTTCCCCTAGCTGGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR TCA 90 bp CAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATTTAAGGCCCCCTCATCTGGCCTaGGACAGATGCTGGAGCCCA +
Preference number: 2 (lower is better)
Translates to: QGDPAGNGRLHPATQYLRPPHLA*DRCWSP
Trigger: TGGGCTCCAGCATCTGTCTCAGGCCAGATGAGGGGG...CCTTAAATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR TCA 90 bp CACCAGACCACTGGACAAGAGAGGTCAGAGTCATACATAGCAATCTGGACAGGAGCTCTCATCTCCATCTaGGGTAGTGCTGGCCTTGGG +
Preference number: 2 (lower is better)
Translates to: HQTTGQERSESYIAIWTGALISI*GSAGLG
Trigger: CCCAAGGCCAGCACTACCTCAGATGGAGATGAGAGC...TCCTGTCCAGATTGCTATGTATGACTCTGACCTCTCTTGTCCAGTGGTCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424122.5
3UTR-3UTR TCA 90 bp ACTTTGCCAGTTCCTGGCTCTGTTGTAAGGCAGCTGCCAGCAGTCCCGGAGATGCGCTTCCGTTCCTTTTaGCGCTGCAATAGTAATGGT +
Preference number: 2 (lower is better)
Translates to: TLPVPGSVVRQLPAVPEMRFRSF*RCNSNG
Trigger: ACCATTACTATTGCAGCGTCAAAAGGAACGGAAGCG...CATCTCCGGGACTGCTGGCAGCTGCCTTACAACAGAGCCAGGAACTGGCAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449459.5
3UTR-3UTR GCA 90 bp ATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATTTAGTCCCATCAAGGCCTTaGCCAGGCGGAAGAGGCCCC +
Preference number: 2 (lower is better)
Translates to: IQGDPAGNGRLHPATQYLVPSRP*PGGRGP
Trigger: GGGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGAC...TAAATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CCA 90 bp GACAGACCCATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACATCAAGCTGAAAGGTaGGACTCAAGCCCCCTCAGC +
Preference number: 2 (lower is better)
Translates to: DRPIQGDPAGNGRLHPATHQAER*DSSPLS
Trigger: GCTGAGGGGGCTTGAGTCCCACCTTTCAGCTTGATG...TGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGATGGGTCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CCA 90 bp ACAGCAGCTGCCTCTCTGAAGCGCTTTGGTCCCAGAGGGATCAGAAAGAAAAGATACCATGCCCAGTGCTaGGGTGGAGAAACAGAGTGG +
Preference number: 2 (lower is better)
Translates to: TAAASLKRFGPRGIRKKRYHAQC*GGETEW
Trigger: CCACTCTGTTTCTCCACCCCAGCACTGGGCATGGTA...TCTTTTCTTTCTGATCCCTCTGGGACCAAAGCGCTTCAGAGAGGCAGCTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410003.5
3UTR-3UTR CCA 90 bp GTGAATATTCTAGCAGTGAGAGGAGGTGAGCACCAGACCACTGGACAAGAGAGGTACCATGCCCAGTGCTaGGGTGGAGAAACAGAGTGG +
Preference number: 2 (lower is better)
Translates to: VNILAVRGGEHQTTGQERYHAQC*GGETEW
Trigger: CCACTCTGTTTCTCCACCCCAGCACTGGGCATGGTA...CCTCTCTTGTCCAGTGGTCTGGTGCTCACCTCCTCTCACTGCTAGAATATTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CCA 90 bp CACCAAGGGATATATACATGGCCCTGCCCTATGAGGGACCGGTGCCCCCTCATCTTCTTACCCAGGAAGTaGGGAATTCAGTTGACCCTT +
Preference number: 2 (lower is better)
Translates to: HQGIYTWPCPMRDRCPLIFLPRK*GIQLTL
Trigger: AAGGGTCAACTGAATTCCCCACTTCCTGGGTAAGAA...GATGAGGGGGCACCGGTCCCTCATAGGGCAGGGCCATGTATATATCCCTTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CCA 90 bp AATATCCCTTATGAGGTAGGGACTACCCTCATTTTTACAGGTGAGGGAACTGAGAGCCAGGGCCCACGCTaGCTGACCCAACCGCTCATG +
Preference number: 2 (lower is better)
Translates to: NIPYEVGTTLIFTGEGTESQGPR*LTQPLM
Trigger: CATGAGCGGTTGGGTCAGCCAGCGTGGGCCCTGGCT...CTCAGTTCCCTCACCTGTAAAAATGAGGGTAGTCCCTACCTCATAAGGGATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CCA 90 bp ACCCACAGGGCAGCAATAATCATTTATCCTGATGAAAGGTTCCTCTGTGAAAGGGCCAGACCCCTGCCTTaGGGCTCCTGGTTCAGTCCC +
Preference number: 2 (lower is better)
Translates to: THRAAIIIYPDERFLCERARPLP*GSWFSP
Trigger: GGGACTGAACCAGGAGCCCCAAGGCAGGGGTCTGGC...CCTTTCACAGAGGAACCTTTCATCAGGATAAATGATTATTGCTGCCCTGTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424122.5
3UTR-3UTR TCA 90 bp CTAGGGGAAGCTGCCAGGATCTTAGACGTGAAATTAAAAGGAGATCATGCTTCTGCCCCCTCAGCACTGTaGCCCCGTTCCTGTACACCA +
Preference number: 2 (lower is better)
Translates to: LGEAARILDVKLKGDHASAPSAL*PRSCTP
Trigger: TGGTGTACAGGAACGGGGTCACAGTGCTGAGGGGGC...AGAAGCATGATCTCCTTTTAATTTCACGTCTAAGATCCTGGCAGCTTCCCCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR TCA 90 bp CTTAGACGTGAAATTAAAAGGAGATCATGCTTCTTACCCAGGAAGTGGGGAATTAGGGCCCACGCTGGCTaGCCCAACCGCTCATGGCAG +
Preference number: 2 (lower is better)
Translates to: LRREIKRRSCFLPRKWGIRAHAG*PNRSWQ
Trigger: CTGCCATGAGCGGTTGGGTCAGCCAGCGTGGGCCCT...AATTCCCCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAATTTCACGTCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR TCA 90 bp CTTCCCCATGGCAAGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGATCACCACACTGTCCCTaGACTGGGTTTCCAGGGCTG +
Preference number: 2 (lower is better)
Translates to: LPHGKRNDCQGIINYGSRSPHCP*TGFPGL
Trigger: CAGCCCTGGAAACCCAGTTCAGGGACAGTGTGGTGA...TCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCTTGCCATGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424122.5
3UTR-3UTR TCA 90 bp ACCCACAGGGCAGCAATAATCATTTATCCTGATGAAAGGTTCCTCTGTGAAAGGTCTCTCTGCGGGCACTaGGGGGCCAATCCCCAACCT +
Preference number: 2 (lower is better)
Translates to: THRAAIIIYPDERFLCERSLCGH*GANPQP
Trigger: AGGTTGGGGATTGGCCCCTCAGTGCCCGCAGAGAGA...CCTTTCACAGAGGAACCTTTCATCAGGATAAATGATTATTGCTGCCCTGTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424122.5
3UTR-3UTR CCA 90 bp CCCATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATGGGAGAGCCACCAGTTaGGAGTGTGGACATGTATGG +
Preference number: 2 (lower is better)
Translates to: PIQGDPAGNGRLHPATQYGRATS*ECGHVW
Trigger: CCATACATGTCCACACTCCCAACTGGTGGCTCTCCC...ATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CCA 90 bp CTAAAGCCTTCTGCAGACCCACATTTAAATGAGCTGACAGTCCCAGCAGGACTAAAGGTTGTAGCAGCTTaGGCACCTGCTGAGGCCCCA +
Preference number: 2 (lower is better)
Translates to: LKPSADPHLNELTVPAGLKVVAA*APAEAP
Trigger: TGGGGCCTCAGCAGGTGCCCAAGCTGCTACAACCTT...TAGTCCTGCTGGGACTGTCAGCTCATTTAAATGTGGGTCTGCAGAAGGCTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CCA 90 bp CTAAAGCCTTCTGCAGACCCACATTTAAATGAGCTGACAGTCCCAGCAGGACTATGCCCAGTGCTGGGGTaGAGAAACAGAGTGGCCAAG +
Preference number: 2 (lower is better)
Translates to: LKPSADPHLNELTVPAGLCPVLG*RNRVAK
Trigger: CTTGGCCACTCTGTTTCTCCACCCCAGCACTGGGCA...TAGTCCTGCTGGGACTGTCAGCTCATTTAAATGTGGGTCTGCAGAAGGCTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CCA 90 bp CAAGAGAGGTCAGAGTCATACATAGCAATCTGGACAGGAAATGGCATGAGGAGCCTGCCTTGGGGCTCCTaGTTCAGTCCCTTCTCTCTG +
Preference number: 2 (lower is better)
Translates to: QERSESYIAIWTGNGMRSLPWGS*FSPFSL
Trigger: CAGAGAGAAGGGACTGAACCAGGAGCCCCAAGGCAG...GCTCCTCATGCCATTTCCTGTCCAGATTGCTATGTATGACTCTGACCTCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424122.5
3UTR-3UTR TCA 90 bp GGACTTCCCAAATGCAAACCCTTGGTGAATATTCTAGCAGTGAGAGGAGGTGAGCCAAGCTCTAGTTGGTaGATGAGGTCCCCTGGACCA +
Preference number: 2 (lower is better)
Translates to: GLPKCKPLVNILAVRGGEPSSSW*MRSPGP
Trigger: TGGTCCAGGGGACCTCATTCACCAACTAGAGCTTGG...CTCACCTCCTCTCACTGCTAGAATATTCACCAAGGGTTTGCATTTGGGAAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR TCA 90 bp CAAGAGAGGTCAGAGTCATACATAGCAATCTGGACAGGAAATGGCATGAGGAGCGAGCATCCATCAAGCTaGAAGGTGGGACTCAAGCCC +
Preference number: 2 (lower is better)
Translates to: QERSESYIAIWTGNGMRSEHPSS*KVGLKP
Trigger: GGGCTTGAGTCCCACCTTTCAGCTTGATGGATGCTC...GCTCCTCATGCCATTTCCTGTCCAGATTGCTATGTATGACTCTGACCTCTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR TCA 90 bp CTAAAGCCTTCTGCAGACCCACATTTAAATGAGCTGACAGTCCCAGCAGGACTATGGCATGAGGAGCTGTaGGTAATCTGGGGGCTATGG +
Preference number: 2 (lower is better)
Translates to: LKPSADPHLNELTVPAGLWHEEL*VIWGLW
Trigger: CCATAGCCCCCAGATTACTCACAGCTCCTCATGCCA...TAGTCCTGCTGGGACTGTCAGCTCATTTAAATGTGGGTCTGCAGAAGGCTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR TCA 90 bp AGAGGAGGTGAGCACCAGACCACTGGACAAGAGAGGTCAGAGTCATACATAGCAGGACAGGAAATGGCATaGGGAGCTGTGAGTAATCTG +
Preference number: 2 (lower is better)
Translates to: RGGEHQTTGQERSESYIAGQEMA*GAVSNL
Trigger: CAGATTACTCACAGCTCCTCATGCCATTTCCTGTCC...TGCTATGTATGACTCTGACCTCTCTTGTCCAGTGGTCTGGTGCTCACCTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR TCA 90 bp AAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATGGGGCCTTCTACTCTaGGTCTGGGAGAGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: KICSELSPHYVPHQGIYTWGLLL*VWERGW
Trigger: CCAGCCCCTCTCCCAGACTCAGAGTAGAAGGCCCCA...TGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR GCA 90 bp CCCATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATATATATACATGGCCCTaGCCTATGAGGGACCGGTGC +
Preference number: 2 (lower is better)
Translates to: PIQGDPAGNGRLHPATQYIYTWP*PMRDRC
Trigger: GCACCGGTCCCTCATAGGGCAGGGCCATGTATATAT...ATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR GCA 90 bp CACCAAGGGATATATACATGGCCCTGCCCTATGAGGGACCGGTGCCCCCTCATCAAGGGACTTCCCAAATaGAAACCCTTGGTGAATATT +
Preference number: 2 (lower is better)
Translates to: HQGIYTWPCPMRDRCPLIKGLPK*KPLVNI
Trigger: AATATTCACCAAGGGTTTGCATTTGGGAAGTCCCTT...GATGAGGGGGCACCGGTCCCTCATAGGGCAGGGCCATGTATATATCCCTTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR GCA 90 bp GTGAATATTCTAGCAGTGAGAGGAGGTGAGCACCAGACCACTGGACAAGAGAGGAATTACCATGCCCAGTaGTGGGGTGGAGAAACAGAG +
Preference number: 2 (lower is better)
Translates to: VNILAVRGGEHQTTGQERNYHAQ*WGGETE
Trigger: CTCTGTTTCTCCACCCCAGCACTGGGCATGGTAATT...CCTCTCTTGTCCAGTGGTCTGGTGCTCACCTCCTCTCACTGCTAGAATATTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR GCA 90 bp ATGTTTCAATACCTTCTCTCTCCAGGTATGAACAGTATTGAGCAAGACCCACAGCCTATGAGGGACCGGTaGCCCCTCATCTGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: MFQYLLSPGMNSIEQDPQPMRDR*PLIWPE
Trigger: CTCAGGCCAGATGAGGGGGCACCGGTCCCTCATAGG...CTGTGGGTCTTGCTCAATACTGTTCATACCTGGAGAGAGAAGGTATTGAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CCA 90 bp GACAGACCCATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAAGGGATATATACATaGCCCTGCCCTATGAGGGAC +
Preference number: 2 (lower is better)
Translates to: DRPIQGDPAGNGRLHPATQGIYT*PCPMRD
Trigger: GTCCCTCATAGGGCAGGGCCATGTATATATCCCTTG...TGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGATGGGTCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CCA 90 bp CCCATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATCACCAGTTGGGAGTGTaGACATGTATGGCCCTACCA +
Preference number: 2 (lower is better)
Translates to: PIQGDPAGNGRLHPATQYHQLGV*TCMALP
Trigger: TGGTAGGGCCATACATGTCCACACTCCCAACTGGTG...ATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CCA 90 bp TGGACAAGAGAGGTCAGAGTCATACATAGCAATCTGGACAGGAAATGGCATGAGTGCCCAGTGCTGGGGTaGAGAAACAGAGTGGCCAAG +
Preference number: 2 (lower is better)
Translates to: WTREVRVIHSNLDRKWHECPVLG*RNRVAK
Trigger: CTTGGCCACTCTGTTTCTCCACCCCAGCACTGGGCA...CTCATGCCATTTCCTGTCCAGATTGCTATGTATGACTCTGACCTCTCTTGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR TCA 90 bp CCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATTTAAGGGGCCTAAACGAGCATCCATCAAGCTaGAAGGTGGGACTCAAGCCC +
Preference number: 2 (lower is better)
Translates to: PAGNGRLHPATQYLRGLNEHPSS*KVGLKP
Trigger: GGGCTTGAGTCCCACCTTTCAGCTTGATGGATGCTC...GTTTAGGCCCCTTAAATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR TCA 90 bp CCCATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATAGGTATGAACAGTATTaGGCAAGACCCACAGGGCAG +
Preference number: 2 (lower is better)
Translates to: PIQGDPAGNGRLHPATQYRYEQY*ARPTGQ
Trigger: CTGCCCTGTGGGTCTTGCTCAATACTGTTCATACCT...ATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR TCA 90 bp CCTTTCTCTCATCAGAAGCTTCCCCATGGCAAGAGGAATGACTGCCAGGGCATCTTCTCTCTCCAGGTATaGACAGTATTGAGCAAGACC +
Preference number: 2 (lower is better)
Translates to: PFSHQKLPHGKRNDCQGIFSLQV*TVLSKT
Trigger: GGTCTTGCTCAATACTGTTCATACCTGGAGAGAGAA...GATGCCCTGGCAGTCATTCCTCTTGCCATGGGGAAGCTTCTGATGAGAGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR TCA 90 bp GCTTTCCATCCTCACAATATCCCTTATGAGGTAGGGACTACCCTCATTTTTACACAGCAGCTGCCTCTCTaGAGCGCTTTGGTCCCAGAG +
Preference number: 2 (lower is better)
Translates to: AFHPHNIPYEVGTTLIFTQQLPL*SALVPE
Trigger: CTCTGGGACCAAAGCGCTTCAGAGAGGCAGCTGCTG...TGTAAAAATGAGGGTAGTCCCTACCTCATAAGGGATATTGTGAGGATGGAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410003.5
3UTR-3UTR CCA 90 bp CCCATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATCAAGGGATATATACATaGCCCTGCCCTATGAGGGAC +
Preference number: 2 (lower is better)
Translates to: PIQGDPAGNGRLHPATQYQGIYT*PCPMRD
Trigger: GTCCCTCATAGGGCAGGGCCATGTATATATCCCTTG...ATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CCA 90 bp CATTGTGACACTTTGGTACTAGAAGCTTATCTAGAAAGTCAACATAGACCCTCTAGGGTAAGGGCCACCTaGGCATCAGCCAGGGCCCAC +
Preference number: 2 (lower is better)
Translates to: HCDTLVLEAYLESQHRPSRVRAT*ASARAH
Trigger: GTGGGCCCTGGCTGATGCCCAGGTGGCCCTTACCCT...AGAGGGTCTATGTTGACTTTCTAGATAAGCTTCTAGTACCAAAGTGTCACAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
3UTR-3UTR CCA 90 bp AGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGAGAATAAGGTCTCATCCCGGAGATGCCTTTaGACTCTGCTGGGGCCTCTC +
Preference number: 2 (lower is better)
Translates to: RGMTARASLTMDLENKVSSRRCL*TLLGPL
Trigger: GAGAGGCCCCAGCAGAGTCCAAAGGCATCTCCGGGA...TGAGACCTTATTCTCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424122.5
3UTR-3UTR CCA 90 bp CATTGTGACACTTTGGTACTAGAAGCTTATCTAGAAAGTCAACATAGACCCTCTGCCCCCACCTACCGGTaGTCCTGGGGGTTGAGCTTC +
Preference number: 2 (lower is better)
Translates to: HCDTLVLEAYLESQHRPSAPTYR*SWGLSF
Trigger: GAAGCTCAACCCCCAGGACCACCGGTAGGTGGGGGC...AGAGGGTCTATGTTGACTTTCTAGATAAGCTTCTAGTACCAAAGTGTCACAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000449459.5
3UTR-3UTR TCA 90 bp CAAGAGAGGTCAGAGTCATACATAGCAATCTGGACAGGAAATGGCATGAGGAGCAGACCCACATTTAAATaGGCTGACAGTCCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: QERSESYIAIWTGNGMRSRPTFK*ADSPSR
Trigger: CCTGCTGGGACTGTCAGCTCATTTAAATGTGGGTCT...GCTCCTCATGCCATTTCCTGTCCAGATTGCTATGTATGACTCTGACCTCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR TCA 90 bp ATTAAAAGGAGATCATGCTTCTTACCCAGGAAGTGGGGAATTCAGTTGACCCTTAGGTGGCCAAAGGTCTaGGTCCTCAACACTCTGCCC +
Preference number: 2 (lower is better)
Translates to: IKRRSCFLPRKWGIQLTLRWPKV*VLNTLP
Trigger: GGGCAGAGTGTTGAGGACTCAGACCTTTGGCCACCT...AAGGGTCAACTGAATTCCCCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410003.5
3UTR-3UTR TCA 90 bp AAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACACCAGCCAATTCTCCCTaGTACCCGCCTCAGCATGAC +
Preference number: 2 (lower is better)
Translates to: KICSELSPHYVPHQGIYTPANSP*YPPQHD
Trigger: GTCATGCTGAGGCGGGTATCAGGGAGAATTGGCTGG...TGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410003.5
3UTR-3UTR TCA 90 bp AAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACACCCTCCTTAGCCACCTaGGGCTTGGTATTGCAGTCC +
Preference number: 2 (lower is better)
Translates to: KICSELSPHYVPHQGIYTPSLAT*GLVLQS
Trigger: GGACTGCAATACCAAGCCTCAGGTGGCTAAGGAGGG...TGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410003.5
3UTR-3UTR GCA 90 bp AGAGGAGGTGAGCACCAGACCACTGGACAAGAGAGGTCAGAGTCATACATAGCAGGCAAGAGGAATGACTaGCAGGGCATCATTAACTAT +
Preference number: 2 (lower is better)
Translates to: RGGEHQTTGQERSESYIAGKRND*QGIINY
Trigger: ATAGTTAATGATGCCCTGGCAGTCATTCCTCTTGCC...TGCTATGTATGACTCTGACCTCTCTTGTCCAGTGGTCTGGTGCTCACCTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CCA 90 bp GGACTTCCCAAATGCAAACCCTTGGTGAATATTCTAGCAGTGAGAGGAGGTGAGGTGAATGAGGTCCCCTaGACCAAGAGGAAGAGAAAG +
Preference number: 2 (lower is better)
Translates to: GLPKCKPLVNILAVRGGEVNEVP*TKRKRK
Trigger: CTTTCTCTTCCTCTTGGTCCAGGGGACCTCATTCAC...CTCACCTCCTCTCACTGCTAGAATATTCACCAAGGGTTTGCATTTGGGAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CCA 90 bp CTAAAGCCTTCTGCAGACCCACATTTAAATGAGCTGACAGTCCCAGCAGGACTAGTAATCTGGGGGCTATaGCTAGAAAAACAGGGCACG +
Preference number: 2 (lower is better)
Translates to: LKPSADPHLNELTVPAGLVIWGL*LEKQGT
Trigger: CGTGCCCTGTTTTTCTAGCCATAGCCCCCAGATTAC...TAGTCCTGCTGGGACTGTCAGCTCATTTAAATGTGGGTCTGCAGAAGGCTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CCA 90 bp TGGACAAGAGAGGTCAGAGTCATACATAGCAATCTGGACAGGAAATGGCATGAGCACCAGTTGGGAGTGTaGACATGTATGGCCCTACCA +
Preference number: 2 (lower is better)
Translates to: WTREVRVIHSNLDRKWHEHQLGV*TCMALP
Trigger: TGGTAGGGCCATACATGTCCACACTCCCAACTGGTG...CTCATGCCATTTCCTGTCCAGATTGCTATGTATGACTCTGACCTCTCTTGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CCA 90 bp ATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATTTACTTACCAGTGTGAGGTaGAGAAGGCAAGAGCGGAGC +
Preference number: 2 (lower is better)
Translates to: IQGDPAGNGRLHPATQYLLTSVR*RRQERS
Trigger: GCTCCGCTCTTGCCTTCTCCACCTCACACTGGTAAG...TAAATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410003.5
3UTR-3UTR CCA 90 bp CATTGTGACACTTTGGTACTAGAAGCTTATCTAGAAAGTCAACATAGACCCTCTGGGAGAGGGGCTGGTTaGGGTGGCTTCGGTGACATG +
Preference number: 2 (lower is better)
Translates to: HCDTLVLEAYLESQHRPSGRGAG*GGFGDM
Trigger: CATGTCACCGAAGCCACCCCAACCAGCCCCTCTCCC...AGAGGGTCTATGTTGACTTTCTAGATAAGCTTCTAGTACCAAAGTGTCACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410003.5
3UTR-3UTR TCA 90 bp AGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGAGAATAAGGTCTCAGCTCTAGTTGGTGAATaGGGTCCCCTGGACCAAGAG +
Preference number: 2 (lower is better)
Translates to: RGMTARASLTMDLENKVSALVGE*GPLDQE
Trigger: CTCTTGGTCCAGGGGACCTCATTCACCAACTAGAGC...TGAGACCTTATTCTCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR TCA 90 bp AAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATGGCATGAGGAGCTGTaGGTAATCTGGGGGCTATGG +
Preference number: 2 (lower is better)
Translates to: KICSELSPHYVPHQGIYTWHEEL*VIWGLW
Trigger: CCATAGCCCCCAGATTACTCACAGCTCCTCATGCCA...TGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR GCA 90 bp ATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATTTAATATATACATGGCCCTaGCCTATGAGGGACCGGTGC +
Preference number: 2 (lower is better)
Translates to: IQGDPAGNGRLHPATQYLIYTWP*PMRDRC
Trigger: GCACCGGTCCCTCATAGGGCAGGGCCATGTATATAT...TAAATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR GCA 90 bp AGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGAGAATAAGGTCTCAGATGCCTTTGGACTCTaGTGGGGCCTCTCCTCTCTT +
Preference number: 2 (lower is better)
Translates to: RGMTARASLTMDLENKVSDAFGL*WGLSSL
Trigger: AAGAGAGGAGAGGCCCCAGCAGAGTCCAAAGGCATC...TGAGACCTTATTCTCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424122.5
3UTR-3UTR CCA 90 bp ATGGTAGAAACCATTTTGAGCAAAGCTGGTACCCAACTTTGCCAGTTCCTGGCTCAAGGGATATATACATaGCCCTGCCCTATGAGGGAC +
Preference number: 2 (lower is better)
Translates to: MVETILSKAGTQLCQFLAQGIYT*PCPMRD
Trigger: GTCCCTCATAGGGCAGGGCCATGTATATATCCCTTG...AGCCAGGAACTGGCAAAGTTGGGTACCAGCTTTGCTCAAAATGGTTTCTACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424122.5
3UTR-3UTR CCA 90 bp AAGGGACTTCCCAAATGCAAACCCTTGGTGAATATTCTAGCAGTGAGAGGAGGTGTGAATGAGGTCCCCTaGACCAAGAGGAAGAGAAAG +
Preference number: 2 (lower is better)
Translates to: KGLPKCKPLVNILAVRGGVNEVP*TKRKRK
Trigger: CTTTCTCTTCCTCTTGGTCCAGGGGACCTCATTCAC...ACCTCCTCTCACTGCTAGAATATTCACCAAGGGTTTGCATTTGGGAAGTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CCA 90 bp AGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGAGAATAAGGTCTCACATCAAGCTGAAAGGTaGGACTCAAGCCCCCTCAGC +
Preference number: 2 (lower is better)
Translates to: RGMTARASLTMDLENKVSHQAER*DSSPLS
Trigger: GCTGAGGGGGCTTGAGTCCCACCTTTCAGCTTGATG...TGAGACCTTATTCTCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CCA 90 bp CATTGTGACACTTTGGTACTAGAAGCTTATCTAGAAAGTCAACATAGACCCTCTTCCCGGAGATGCCTTTaGACTCTGCTGGGGCCTCTC +
Preference number: 2 (lower is better)
Translates to: HCDTLVLEAYLESQHRPSSRRCL*TLLGPL
Trigger: GAGAGGCCCCAGCAGAGTCCAAAGGCATCTCCGGGA...AGAGGGTCTATGTTGACTTTCTAGATAAGCTTCTAGTACCAAAGTGTCACAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449459.5
3UTR CAA 90 bp CCATCTTTGCAGCTCTATGAGACAGGCATCATTATTATCCTCATTTaGCAGGTGAAAAAGCAGACAAGAGAGGCACCAGCAAGAGGCCTC +
Preference number: 2 (lower is better)
Translates to: PSLQLYETGIIIILI*QVKKQTREAPARGL
Trigger: GAGGCCTCTTGCTGGTGCCTCTCTTGTCTGCTTTTTCACCTGCAAAATGAGGATAATAATGATGCCTGTCTCATAGAGCTGCAAAGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449459.5
3UTR-3UTR TCA 90 bp AATATCCCTTATGAGGTAGGGACTACCCTCATTTTTACAGGTGAGGGAACTGAGAGACCCACATTTAAATaGGCTGACAGTCCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: NIPYEVGTTLIFTGEGTERPTFK*ADSPSR
Trigger: CCTGCTGGGACTGTCAGCTCATTTAAATGTGGGTCT...CTCAGTTCCCTCACCTGTAAAAATGAGGGTAGTCCCTACCTCATAAGGGATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR TCA 90 bp CATTGTGACACTTTGGTACTAGAAGCTTATCTAGAAAGTCAACATAGACCCTCTAGGTGGCCAAAGGTCTaGGTCCTCAACACTCTGCCC +
Preference number: 2 (lower is better)
Translates to: HCDTLVLEAYLESQHRPSRWPKV*VLNTLP
Trigger: GGGCAGAGTGTTGAGGACTCAGACCTTTGGCCACCT...AGAGGGTCTATGTTGACTTTCTAGATAAGCTTCTAGTACCAAAGTGTCACAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
3UTR-3UTR GCA 90 bp ATTAAAAGGAGATCATGCTTCTTACCCAGGAAGTGGGGAATTCAGTTGACCCTTCCTGAGGCTTGGTATTaGAGTCCCAGCCAATTCTCC +
Preference number: 2 (lower is better)
Translates to: IKRRSCFLPRKWGIQLTLPEAWY*SPSQFS
Trigger: GGAGAATTGGCTGGGACTGCAATACCAAGCCTCAGG...AAGGGTCAACTGAATTCCCCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410003.5
3UTR-3UTR GCA 90 bp CGTGAAATTAAAAGGAGATCATGCTTCTTACCCAGGAAGTGGGGAATTCAGTTGGCCAATCCCCAACCTTaGGCAAAGCCAGAGACACAA +
Preference number: 2 (lower is better)
Translates to: REIKRRSCFLPRKWGIQLANPQP*AKPETQ
Trigger: TTGTGTCTCTGGCTTTGCGCAAGGTTGGGGATTGGC...CAACTGAATTCCCCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAATTTCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424122.5
3UTR-3UTR CCA 90 bp CTTCCCCATGGCAAGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGATTCTTACCCAGGAAGTaGGGAATTCAGTTGACCCTT +
Preference number: 2 (lower is better)
Translates to: LPHGKRNDCQGIINYGSRFLPRK*GIQLTL
Trigger: AAGGGTCAACTGAATTCCCCACTTCCTGGGTAAGAA...TCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCTTGCCATGGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CCA 90 bp CTAGGGGAAGCTGCCAGGATCTTAGACGTGAAATTAAAAGGAGATCATGCTTCTTTTCCAAATAACCGGTaGTCCTGGGGGTTGAGCTTC +
Preference number: 2 (lower is better)
Translates to: LGEAARILDVKLKGDHASFPNNR*SWGLSF
Trigger: GAAGCTCAACCCCCAGGACCACCGGTTATTTGGAAA...AGAAGCATGATCTCCTTTTAATTTCACGTCTAAGATCCTGGCAGCTTCCCCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000424122.5
3UTR-3UTR GCA 90 bp AAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACAAATTACCATGCCCAGTaGTGGGGTGGAGAAACAGAG +
Preference number: 2 (lower is better)
Translates to: KICSELSPHYVPHQGIYTNYHAQ*WGGETE
Trigger: CTCTGTTTCTCCACCCCAGCACTGGGCATGGTAATT...TGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CCA 90 bp AAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACACAAGGGATATATACATaGCCCTGCCCTATGAGGGAC +
Preference number: 2 (lower is better)
Translates to: KICSELSPHYVPHQGIYTQGIYT*PCPMRD
Trigger: GTCCCTCATAGGGCAGGGCCATGTATATATCCCTTG...TGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
3UTR-3UTR CCA 90 bp CCAGGTATGAACAGTATTGAGCAAGACCCACAGGGCAGCAATAATCATTTATCCCAAAGGATGTTTCAGTaGATGTGGGGCTCCTTTCTC +
Preference number: 2 (lower is better)
Translates to: PGMNSIEQDPQGSNNHLSQRMFQ*MWGSFL
Trigger: GAGAAAGGAGCCCCACATCCACTGAAACATCCTTTG...GGATAAATGATTATTGCTGCCCTGTGGGTCTTGCTCAATACTGTTCATACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CCA 90 bp ACCCACAGGGCAGCAATAATCATTTATCCTGATGAAAGGTTCCTCTGTGAAAGGCAAAGGATGTTTCAGTaGATGTGGGGCTCCTTTCTC +
Preference number: 2 (lower is better)
Translates to: THRAAIIIYPDERFLCERQRMFQ*MWGSFL
Trigger: GAGAAAGGAGCCCCACATCCACTGAAACATCCTTTG...CCTTTCACAGAGGAACCTTTCATCAGGATAAATGATTATTGCTGCCCTGTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CCA 90 bp AATATCCCTTATGAGGTAGGGACTACCCTCATTTTTACAGGTGAGGGAACTGAGCAAAGGATGTTTCAGTaGATGTGGGGCTCCTTTCTC +
Preference number: 2 (lower is better)
Translates to: NIPYEVGTTLIFTGEGTEQRMFQ*MWGSFL
Trigger: GAGAAAGGAGCCCCACATCCACTGAAACATCCTTTG...CTCAGTTCCCTCACCTGTAAAAATGAGGGTAGTCCCTACCTCATAAGGGATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR GCA 90 bp CTAAAGCCTTCTGCAGACCCACATTTAAATGAGCTGACAGTCCCAGCAGGACTAATTAAAAGGAGATCATaGTTCTTACCCAGGAAGTGG +
Preference number: 2 (lower is better)
Translates to: LKPSADPHLNELTVPAGLIKRRS*FLPRKW
Trigger: CCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAAT...TAGTCCTGCTGGGACTGTCAGCTCATTTAAATGTGGGTCTGCAGAAGGCTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CCA 90 bp AGGAACCAGCTAGGGGAAGCTGCCAGGATCTTAGACGTGAAATTAAAAGGAGATTCATACATAGCAATCTaGACAGGAAATGGCATGAGG +
Preference number: 2 (lower is better)
Translates to: RNQLGEAARILDVKLKGDSYIAI*TGNGMR
Trigger: CCTCATGCCATTTCCTGTCCAGATTGCTATGTATGA...ATCTCCTTTTAATTTCACGTCTAAGATCCTGGCAGCTTCCCCTAGCTGGTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR TCA 90 bp AAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACACCTCCAGAAGAAGCTTaGGAACCAAAGGATGTTTCA +
Preference number: 2 (lower is better)
Translates to: KICSELSPHYVPHQGIYTPPEEA*EPKDVS
Trigger: TGAAACATCCTTTGGTTCTCAAGCTTCTTCTGGAGG...TGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR GCA 90 bp CCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATTTAAGGGGCCTAAACATTAAAAGGAGATCATaGTTCTTACCCAGGAAGTGG +
Preference number: 2 (lower is better)
Translates to: PAGNGRLHPATQYLRGLNIKRRS*FLPRKW
Trigger: CCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAAT...GTTTAGGCCCCTTAAATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CCA 90 bp ATTAAAAGGAGATCATGCTTCTTACCCAGGAAGTGGGGAATTCAGTTGACCCTTATGTTTCAGTGGATGTaGGGCTCCTTTCTCTCATCA +
Preference number: 2 (lower is better)
Translates to: IKRRSCFLPRKWGIQLTLMFQWM*GSFLSS
Trigger: TGATGAGAGAAAGGAGCCCCACATCCACTGAAACAT...AAGGGTCAACTGAATTCCCCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CCA 90 bp GCTTTCCATCCTCACAATATCCCTTATGAGGTAGGGACTACCCTCATTTTTACATTCTTACCCAGGAAGTaGGGAATTCAGTTGACCCTT +
Preference number: 2 (lower is better)
Translates to: AFHPHNIPYEVGTTLIFTFLPRK*GIQLTL
Trigger: AAGGGTCAACTGAATTCCCCACTTCCTGGGTAAGAA...TGTAAAAATGAGGGTAGTCCCTACCTCATAAGGGATATTGTGAGGATGGAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR CAA 90 bp ACTTACTGTATGTCGTGTGCTGGGCTAAGATTTCGCATTCCATCTTaGCAGCTCTATGAGACAGGCATCATTATTATCCTCATTTTGCAG +
Preference number: 2 (lower is better)
Translates to: TYCMSCAGLRFRIPS*QLYETGIIIILILQ
Trigger: CTGCAAAATGAGGATAATAATGATGCCTGTCTCATAGAGCTGCAAAGATGGAATGCGAAATCTTAGCCCAGCACACGACATACAGTAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449459.5
3UTR-3UTR TCA 90 bp CTAGGGGAAGCTGCCAGGATCTTAGACGTGAAATTAAAAGGAGATCATGCTTCTTCTCAAAATATGCAGTaGACTGTCACCACACTATGT +
Preference number: 2 (lower is better)
Translates to: LGEAARILDVKLKGDHASSQNMQ*TVTTLC
Trigger: ACATAGTGTGGTGACAGTTCACTGCATATTTTGAGA...AGAAGCATGATCTCCTTTTAATTTCACGTCTAAGATCCTGGCAGCTTCCCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR GCA 90 bp AATATCCCTTATGAGGTAGGGACTACCCTCATTTTTACAGGTGAGGGAACTGAGAAGGGACTTCCCAAATaGAAACCCTTGGTGAATATT +
Preference number: 2 (lower is better)
Translates to: NIPYEVGTTLIFTGEGTEKGLPK*KPLVNI
Trigger: AATATTCACCAAGGGTTTGCATTTGGGAAGTCCCTT...CTCAGTTCCCTCACCTGTAAAAATGAGGGTAGTCCCTACCTCATAAGGGATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR TCA 90 bp GCTTTCCATCCTCACAATATCCCTTATGAGGTAGGGACTACCCTCATTTTTACATCTCAAAATATGCAGTaGACTGTCACCACACTATGT +
Preference number: 2 (lower is better)
Translates to: AFHPHNIPYEVGTTLIFTSQNMQ*TVTTLC
Trigger: ACATAGTGTGGTGACAGTTCACTGCATATTTTGAGA...TGTAAAAATGAGGGTAGTCCCTACCTCATAAGGGATATTGTGAGGATGGAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR TCA 90 bp AAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATCTCAAAATATGCAGTaGACTGTCACCACACTATGT +
Preference number: 2 (lower is better)
Translates to: KICSELSPHYVPHQGIYTSQNMQ*TVTTLC
Trigger: ACATAGTGTGGTGACAGTTCACTGCATATTTTGAGA...TGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
3UTR CCA 72 bp CCCTGCCCTGGCCAAGCCCCCACCTACCGGTGGTCCTaGGGGTTGAGCTTCAAGGCCTGGGTGAAGAGGACC +
Preference number: 3 (lower is better)
Translates to: PCPGQAPTYRWS*GLSFKAWVKRT
Trigger: GGTCCTCTTCACCCAGGCCTTGAAGCTCAACCCCCAGGACCACCGGTAGGTGGGGGCTTGGCCAGGGCAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449459.5
3UTR-3UTR CAA 90 bp CTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGGTGCCAGCTCAGCATGGGGAGAGGTAGTGCTGGCCTaGGGCTCCCCACAGTACTGC +
Preference number: 3 (lower is better)
Translates to: LRGHLREGRPEGASSAWGEVVLA*GSPQYC
Trigger: GCAGTACTGTGGGGAGCCCAAGGCCAGCACTACCTC...TCCCCATGCTGAGCTGGCACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
3UTR TCA 72 bp GGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTaGGGGAAGGTAGGCCTGAGGGTGCCAGCTCAGCAT +
Preference number: 3 (lower is better)
Translates to: GQGTSKQCFEGT*GKVGLRVPAQH
Trigger: ATGCTGAGCTGGCACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000449459.5
3UTR-3UTR CAA 90 bp CCCAGACCTATTACCTGTAGTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCCCAGTCCCATCAAGGCCTaGCCCAGGCGGAAGAGGCCC +
Preference number: 3 (lower is better)
Translates to: PRPITCSPIKALPRRKRPSPIKA*PRRKRP
Trigger: GGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGACT...GGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGACTACAGGTAATAGGTCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
3UTR-3UTR CAA 90 bp GCTGAGGCCCCATTCAGCGGGAGAGCCACCAGTTGGGAGTGTGGACATGTATGGCGGTGGTCCTGGGGGTaGAGCTTCAAGGCCTGGGTG +
Preference number: 3 (lower is better)
Translates to: AEAPFSGRATSWECGHVWRWSWG*SFKAWV
Trigger: CACCCAGGCCTTGAAGCTCAACCCCCAGGACCACCG...CCATACATGTCCACACTCCCAACTGGTGGCTCTCCCGCTGAATGGGGCCTCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424122.5
3UTR TCA 72 bp CAGAGTGGCCAAGGTTGTAGCAGCTTGGGCACCTGCTaGGGCCCCATTCAGCGGGAGAGCCACCAGTTGGGA +
Preference number: 3 (lower is better)
Translates to: QSGQGCSSLGTC*GPIQRESHQLG
Trigger: TCCCAACTGGTGGCTCTCCCGCTGAATGGGGCCTCAGCAGGTGCCCAAGCTGCTACAACCTTGGCCACTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR CCA 72 bp GGGTGGAGAAACAGAGTGGCCAAGGTTGTAGCAGCTTaGGCACCTGCTGAGGCCCCATTCAGCGGGAGAGCC +
Preference number: 3 (lower is better)
Translates to: GWRNRVAKVVAA*APAEAPFSGRA
Trigger: GGCTCTCCCGCTGAATGGGGCCTCAGCAGGTGCCCAAGCTGCTACAACCTTGGCCACTCTGTTTCTCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR CCA 72 bp CATGACAGTGTGCCTGGCCCCCTTACCAGTGTGAGGTaGAGAAGGCAAGAGCGGAGCTCTCGGGCTGCGTCA +
Preference number: 3 (lower is better)
Translates to: HDSVPGPLTSVR*RRQERSSRAAS
Trigger: TGACGCAGCCCGAGAGCTCCGCTCTTGCCTTCTCCACCTCACACTGGTAAGGGGGCCAGGCACACTGTCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
3UTR-3UTR CAA 90 bp TCCAGCCCCAGACCTATTACCTGTAGTCCCATCAAGGCCTTGCCCAGGCGGAAGGAGGTAGTGCTGGCCTaGGGCTCCCCACAGTACTGC +
Preference number: 3 (lower is better)
Translates to: SSPRPITCSPIKALPRRKEVVLA*GSPQYC
Trigger: GCAGTACTGTGGGGAGCCCAAGGCCAGCACTACCTC...CTTCCGCCTGGGCAAGGCCTTGATGGGACTACAGGTAATAGGTCTGGGGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449459.5
3UTR-3UTR CAA 90 bp TCCAGCCCCAGACCTATTACCTGTAGTCCCATCAAGGCCTTGCCCAGGCGGAAGGGGGCCTCTCCTCTCTaGGAGGGCTCTCTTCCTCTT +
Preference number: 3 (lower is better)
Translates to: SSPRPITCSPIKALPRRKGASPL*EGSLPL
Trigger: AAGAGGAAGAGAGCCCTCCAAGAGAGGAGAGGCCCC...CTTCCGCCTGGGCAAGGCCTTGATGGGACTACAGGTAATAGGTCTGGGGCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449459.5
3UTR TCA 72 bp AGTCCCAGCCAATTCTCCCTGATACCCGCCTCAGCATaGCAGTGTGCCTGGCCCCCTTACCAGTGTGAGGTG +
Preference number: 3 (lower is better)
Translates to: SPSQFSLIPASA*QCAWPPYQCEV
Trigger: CACCTCACACTGGTAAGGGGGCCAGGCACACTGTCATGCTGAGGCGGGTATCAGGGAGAATTGGCTGGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
3UTR TCA 72 bp CTGAGGCTTGGTATTGCAGTCCCAGCCAATTCTCCCTaGTACCCGCCTCAGCATGACAGTGTGCCTGGCCCC +
Preference number: 3 (lower is better)
Translates to: LRLGIAVPANSP*YPPQHDSVPGP
Trigger: GGGGCCAGGCACACTGTCATGCTGAGGCGGGTATCAGGGAGAATTGGCTGGGACTGCAATACCAAGCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
3UTR TCA 72 bp GAGCTGGGGCTGAGAAGAGGTGAGCATCCATCAAGCTaGAAGGTGGGACTCAAGCCCCCTCAGCACTGTGAC +
Preference number: 3 (lower is better)
Translates to: ELGLRRGEHPSS*KVGLKPPQHCD
Trigger: GTCACAGTGCTGAGGGGGCTTGAGTCCCACCTTTCAGCTTGATGGATGCTCACCTCTTCTCAGCCCCAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR CCA 72 bp TCACCACACTATGTCCCCCACCAAGGGATATATACATaGCCCTGCCCTATGAGGGACCGGTGCCCCCTCATC +
Preference number: 3 (lower is better)
Translates to: SPHYVPHQGIYT*PCPMRDRCPLI
Trigger: GATGAGGGGGCACCGGTCCCTCATAGGGCAGGGCCATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CAA 90 bp CCTTTCTCTCATCAGAAGCTTCCCCATGGCAAGAGGAATGACTGCCAGGGCATCAGGGCTCTCTTCCTCTaGACCCATCTTCTGGAGGGC +
Preference number: 3 (lower is better)
Translates to: PFSHQKLPHGKRNDCQGIRALFL*THLLEG
Trigger: GCCCTCCAGAAGATGGGTCAAGAGGAAGAGAGCCCT...GATGCCCTGGCAGTCATTCCTCTTGCCATGGGGAAGCTTCTGATGAGAGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424122.5
3UTR TCA 72 bp TGTCCTCCTGGCAAGAGAGTCCACTGCAGGCCATCTTaGGCTCTCTCCTGTTCCCACAAAGTTTCCTCTTTC +
Preference number: 3 (lower is better)
Translates to: CPPGKRVHCRPS*ALSCSHKVSSF
Trigger: GAAAGAGGAAACTTTGTGGGAACAGGAGAGAGCTCAAGATGGCCTGCAGTGGACTCTCTTGCCAGGAGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449459.5
3UTR-3UTR CAA 90 bp GCTTTCCATCCTCACAATATCCCTTATGAGGTAGGGACTACCCTCATTTTTACAAGTCCCATCAAGGCCTaGCCCAGGCGGAAGAGGCCC +
Preference number: 3 (lower is better)
Translates to: AFHPHNIPYEVGTTLIFTSPIKA*PRRKRP
Trigger: GGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGACT...TGTAAAAATGAGGGTAGTCCCTACCTCATAAGGGATATTGTGAGGATGGAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CAA 90 bp ATCCTTCCCCGCCCCCTCCTTAGCCACCTGAGGCTTGGTATTGCAGTCCCAGCCAACCATTGTGACACTTaGGTACTAGAAGCTTATCTA +
Preference number: 3 (lower is better)
Translates to: ILPRPLLSHLRLGIAVPANHCDT*VLEAYL
Trigger: TAGATAAGCTTCTAGTACCAAAGTGTCACAATGGTT...GGCTGGGACTGCAATACCAAGCCTCAGGTGGCTAAGGAGGGGGCGGGGAAGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
3UTR-3UTR CAA 90 bp AACTTTGCCAGTTCCTGGCTCTGTTGTAAGGCAGCTGCCAGCAGTCCCGGAGATCTAGCCACCTTCTTCTaGAGTCGCTTTTTCTCTGCT +
Preference number: 3 (lower is better)
Translates to: NFASSWLCCKAAASSPGDLATFF*SRFFSA
Trigger: AGCAGAGAAAAAGCGACTCAAGAAGAAGGTGGCTAG...ATCTCCGGGACTGCTGGCAGCTGCCTTACAACAGAGCCAGGAACTGGCAAAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449459.5
3UTR-3UTR CAA 90 bp AATATCCCTTATGAGGTAGGGACTACCCTCATTTTTACAGGTGAGGGAACTGAGGAAGGGTCCTGGGGCTaGAGAGGATGGGGCCTTCTA +
Preference number: 3 (lower is better)
Translates to: NIPYEVGTTLIFTGEGTEEGSWG*RGWGLL
Trigger: TAGAAGGCCCCATCCTCTCAAGCCCCAGGACCCTTC...CTCAGTTCCCTCACCTGTAAAAATGAGGGTAGTCCCTACCTCATAAGGGATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CAA 90 bp AAGGGACTTCCCAAATGCAAACCCTTGGTGAATATTCTAGCAGTGAGAGGAGGTGGCCAATCCCCAACCTaGCGCAAAGCCAGAGACACA +
Preference number: 3 (lower is better)
Translates to: KGLPKCKPLVNILAVRGGGQSPT*RKARDT
Trigger: TGTGTCTCTGGCTTTGCGCAAGGTTGGGGATTGGCC...ACCTCCTCTCACTGCTAGAATATTCACCAAGGGTTTGCATTTGGGAAGTCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424122.5
3UTR-3UTR CAA 90 bp ATGGTAGAAACCATTTTGAGCAAAGCTGGTACCCAACTTTGCCAGTTCCTGGCTAGGGCTCTCTTCCTCTaGACCCATCTTCTGGAGGGC +
Preference number: 3 (lower is better)
Translates to: MVETILSKAGTQLCQFLARALFL*THLLEG
Trigger: GCCCTCCAGAAGATGGGTCAAGAGGAAGAGAGCCCT...AGCCAGGAACTGGCAAAGTTGGGTACCAGCTTTGCTCAAAATGGTTTCTACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
3UTR TCA 72 bp CAAACCCTTGGTGAATATTCTAGCAGTGAGAGGAGGTaGGCACCAGACCACTGGACAAGAGAGGTCAGAGTC +
Preference number: 3 (lower is better)
Translates to: QTLGEYSSSERR*APDHWTREVRV
Trigger: GACTCTGACCTCTCTTGTCCAGTGGTCTGGTGCTCACCTCCTCTCACTGCTAGAATATTCACCAAGGGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR TCA 72 bp GGGAGACCTAAAGCCTTCTGCAGACCCACATTTAAATaGGCTGACAGTCCCAGCAGGACTACAGAGGAACCA +
Preference number: 3 (lower is better)
Translates to: GRPKAFCRPTFK*ADSPSRTTEEP
Trigger: TGGTTCCTCTGTAGTCCTGCTGGGACTGTCAGCTCATTTAAATGTGGGTCTGCAGAAGGCTTTAGGTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CAA 90 bp AAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACAGAAGGGTCCTGGGGCTaGAGAGGATGGGGCCTTCTA +
Preference number: 3 (lower is better)
Translates to: KICSELSPHYVPHQGIYTEGSWG*RGWGLL
Trigger: TAGAAGGCCCCATCCTCTCAAGCCCCAGGACCCTTC...TGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CAA 90 bp CCAGGTATGAACAGTATTGAGCAAGACCCACAGGGCAGCAATAATCATTTATCCAGCTGGTACCCAACTTaGCCAGTTCCTGGCTCTGTT +
Preference number: 3 (lower is better)
Translates to: PGMNSIEQDPQGSNNHLSSWYPT*PVPGSV
Trigger: AACAGAGCCAGGAACTGGCAAAGTTGGGTACCAGCT...GGATAAATGATTATTGCTGCCCTGTGGGTCTTGCTCAATACTGTTCATACCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424122.5
3UTR-3UTR CAA 90 bp AAGGGACTTCCCAAATGCAAACCCTTGGTGAATATTCTAGCAGTGAGAGGAGGTTCTATAGTTCCCTTCTaGAGCCTTGGTGGGTTTTAT +
Preference number: 3 (lower is better)
Translates to: KGLPKCKPLVNILAVRGGSIVPF*SLGGFY
Trigger: ATAAAACCCACCAAGGCTCAAGAAGGGAACTATAGA...ACCTCCTCTCACTGCTAGAATATTCACCAAGGGTTTGCATTTGGGAAGTCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CAA 90 bp CAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATTTAAGGTCTATAGTTCCCTTCTaGAGCCTTGGTGGGTTTTAT +
Preference number: 3 (lower is better)
Translates to: QGDPAGNGRLHPATQYLRSIVPF*SLGGFY
Trigger: ATAAAACCCACCAAGGCTCAAGAAGGGAACTATAGA...CCTTAAATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR-3UTR CAA 90 bp AATATCCCTTATGAGGTAGGGACTACCCTCATTTTTACAGGTGAGGGAACTGAGCCCAAATGCAAACCCTaGGTGAATATTCTAGCAGTG +
Preference number: 3 (lower is better)
Translates to: NIPYEVGTTLIFTGEGTEPKCKP*VNILAV
Trigger: CACTGCTAGAATATTCACCAAGGGTTTGCATTTGGG...CTCAGTTCCCTCACCTGTAAAAATGAGGGTAGTCCCTACCTCATAAGGGATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
3UTR TCA 72 bp TACTGCTCCAAACGCTCCTGTCGCTTCCGTTCCTTTTaGCGCTGCAATAGTAATGGTAACAATGATGTATTT +
Preference number: 3 (lower is better)
Translates to: YCSKRSCRFRSF*RCNSNGNNDVF
Trigger: AAATACATCATTGTTACCATTACTATTGCAGCGTCAAAAGGAACGGAAGCGACAGGAGCGTTTGGAGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449459.5
3UTR TCA 72 bp TGGGCTAAGATTTCGCATTCCATCTTTGCAGCTCTATaGGACAGGCATCATTATTATCCTCATTTTGCAGGT +
Preference number: 3 (lower is better)
Translates to: WAKISHSIFAAL*DRHHYYPHFAG
Trigger: ACCTGCAAAATGAGGATAATAATGATGCCTGTCTCATAGAGCTGCAAAGATGGAATGCGAAATCTTAGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449459.5
3UTR CCA 72 bp ATGATGTATTTTGAACACTTACTGTATGTCGTGTGCTaGGCTAAGATTTCGCATTCCATCTTTGCAGCTCTA +
Preference number: 3 (lower is better)
Translates to: MMYFEHLLYVVC*AKISHSIFAAL
Trigger: TAGAGCTGCAAAGATGGAATGCGAAATCTTAGCCCAGCACACGACATACAGTAAGTGTTCAAAATACATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449459.5
CDS-3UTR TCA 90 bp CGGAAGAGGCCCCGGGGCCAGCCAGGCCGTAGGGTAAGGGCCACCTGGGCATCAAGGGCCCACGCTGGCTaGCCCAACCGCTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: RKRPRGQPGRRVRATWASRAHAG*PNRSWQ
Trigger: CTGCCATGAGCGGTTGGGTCAGCCAGCGTGGGCCCT...TGATGCCCAGGTGGCCCTTACCCTACGGCCTGGCTGGCCCCGGGGCCTCTTCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000449459.5
CDS-3UTR CCA 90 bp GTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCCCCGGGGCCAGCCAGGCCGTAAGCCAGGGCCCACGCTaGCTGACCCAACCGCTCATG +
Preference number: 4 (lower is better)
Translates to: VPSRPCPGGRGPGASQAVSQGPR*LTQPLM
Trigger: CATGAGCGGTTGGGTCAGCCAGCGTGGGCCCTGGCT...TACGGCCTGGCTGGCCCCGGGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000449459.5
CDS-3UTR CCA 90 bp GTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCCCCGGGGCCAGCCAGGCCGTAAGGGTAAGGGCCACCTaGGCATCAGCCAGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: VPSRPCPGGRGPGASQAVRVRAT*ASARAH
Trigger: GTGGGCCCTGGCTGATGCCCAGGTGGCCCTTACCCT...TACGGCCTGGCTGGCCCCGGGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000449459.5
CDS-3UTR CCA 90 bp GTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCCCCGGGGCCAGCCAGGCCGTAGGGAGAGGGGCTGGTTaGGGTGGCTTCGGTGACATG +
Preference number: 4 (lower is better)
Translates to: VPSRPCPGGRGPGASQAVGRGAG*GGFGDM
Trigger: CATGTCACCGAAGCCACCCCAACCAGCCCCTCTCCC...TACGGCCTGGCTGGCCCCGGGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp GTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCCCCGGGGCCAGCCAGGCCGTAGCTGACCCTGCAGTGTaGGGTGGAGAAGGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: VPSRPCPGGRGPGASQAVADPAV*GGEGKS
Trigger: GCTCTTGCCTTCTCCACCTCACACTGCAGGGTCAGC...TACGGCCTGGCTGGCCCCGGGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424122.5
CDS-3UTR GCA 90 bp CGGAAGAGGCCCCGGGGCCAGCCAGGCCGTAGGGTAAGGGCCACCTGGGCATCAGGCTCCCCACAGTACTaGTCCAAACGCTCCTGTCGC +
Preference number: 4 (lower is better)
Translates to: RKRPRGQPGRRVRATWASGSPQY*SKRSCR
Trigger: GCGACAGGAGCGTTTGGAGCAGTACTGTGGGGAGCC...TGATGCCCAGGTGGCCCTTACCCTACGGCCTGGCTGGCCCCGGGGCCTCTTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000449459.5
3UTR CAA 72 bp CCTGGCCAAGCCCCCACCTACCGGTGGTCCTGGGGGTaGAGCTTCAAGGCCTGGGTGAAGAGGACCACGGCC +
Preference number: 4 (lower is better)
Translates to: PGQAPTYRWSWG*SFKAWVKRTTA
Trigger: GGCCGTGGTCCTCTTCACCCAGGCCTTGAAGCTCAACCCCCAGGACCACCGGTAGGTGGGGGCTTGGCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000449459.5
CDS-3UTR CCA 90 bp GTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCCCCGGGGCCAGCCAGGCCGTATTGAGCTTCAAGGCCTaGGTGAAGAGGACCACGGCC +
Preference number: 4 (lower is better)
Translates to: VPSRPCPGGRGPGASQAVLSFKA*VKRTTA
Trigger: GGCCGTGGTCCTCTTCACCCAGGCCTTGAAGCTCAA...TACGGCCTGGCTGGCCCCGGGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000449459.5
CDS-3UTR CCA 90 bp CGGAAGAGGCCCCGGGGCCAGCCAGGCCGTAGGGTAAGGGCCACCTGGGCATCATTGAGCTTCAAGGCCTaGGTGAAGAGGACCACGGCC +
Preference number: 4 (lower is better)
Translates to: RKRPRGQPGRRVRATWASLSFKA*VKRTTA
Trigger: GGCCGTGGTCCTCTTCACCCAGGCCTTGAAGCTCAA...TGATGCCCAGGTGGCCCTTACCCTACGGCCTGGCTGGCCCCGGGGCCTCTTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000449459.5
CDS-3UTR CCA 90 bp GTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCCCCGGGGCCAGCCAGGCCGTACAGGGCTCAGACTCTTaGGGAGGATACAGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: VPSRPCPGGRGPGASQAVQGSDS*GGYRKD
Trigger: GTCCTTCCTGTATCCTCCCCAAGAGTCTGAGCCCTG...TACGGCCTGGCTGGCCCCGGGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000449459.5
CDS-3UTR TCA 90 bp AGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTAGCTTGGGCACCTGCTaGGGCCCCATTCAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: RPGDLKAVLRGHLREGRPSLGTC*GPIQRE
Trigger: CTCCCGCTGAATGGGGCCTCAGCAGGTGCCCAAGCT...AGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp GGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTGCTGCAGCCGCCCGCTaGTCCCATCCACATGGATCC +
Preference number: 4 (lower is better)
Translates to: GDRPGDLKAVLRGHLREGAAAAR*SHPHGS
Trigger: GGATCCATGTGGATGGGAGCAGCGGGCGGCTGCAGC...ACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000442235.6
CDS-3UTR GCA 90 bp CCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGTCATGGTGCCACAGCTaGAGCCGCCCGCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: PGDLKAVLRGHLREGRPESWCHS*SRPLLP
Trigger: TGGGAGCAGCGGGCGGCTGCAGCTGTGGCACCATGA...CTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000442235.6
CDS-3UTR GCA 90 bp GACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGGTGCCGGAGGGCCAGACCCCTaGCTTGGGGCTCCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: DLKAVLRGHLREGRPEGAGGPDP*LGAPGS
Trigger: TGAACCAGGAGCCCCAAGGCAGGGGTCTGGCCCTCC...GGCACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR GCA 90 bp TCCAGCCCCAGACCTATTACCTGTAGTCCCATCAAGGCCTTGCCCAGGCGGAAGGCGGAGCTCTCGGGCTaGGTCAGGCTGGGACCCACC +
Preference number: 4 (lower is better)
Translates to: SSPRPITCSPIKALPRRKAELSG*VRLGPT
Trigger: GGTGGGTCCCAGCCTGACGCAGCCCGAGAGCTCCGC...CTTCCGCCTGGGCAAGGCCTTGATGGGACTACAGGTAATAGGTCTGGGGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR GCA 90 bp CACCAAGGGATATATACATGGCCCTGCCCTATGAGGGACCGGTGCCCCCTCATCGCGGAGCTCTCGGGCTaGGTCAGGCTGGGACCCACC +
Preference number: 4 (lower is better)
Translates to: HQGIYTWPCPMRDRCPLIAELSG*VRLGPT
Trigger: GGTGGGTCCCAGCCTGACGCAGCCCGAGAGCTCCGC...GATGAGGGGGCACCGGTCCCTCATAGGGCAGGGCCATGTATATATCCCTTGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp CCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGCTCAACACTCTGCCCTaGCCTGGCCAAGCCCCCACC +
Preference number: 4 (lower is better)
Translates to: PGDLKAVLRGHLREGRPELNTLP*PGQAPT
Trigger: GGTGGGGGCTTGGCCAGGGCAGGGCAGAGTGTTGAG...CTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR CCA 90 bp TGTAGTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCCCCGGGGCCAGCCAGGCCAGGGCTCAGACTCTTaGGGAGGATACAGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: CSPIKALPRRKRPRGQPGQGSDS*GGYRKD
Trigger: GTCCTTCCTGTATCCTCCCCAAGAGTCTGAGCCCTG...GCCTGGCTGGCCCCGGGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGACTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000449459.5
CDS-3UTR CCA 90 bp CCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGCCAGACCCCTGCCTTaGGGCTCCTGGTTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: PGDLKAVLRGHLREGRPEARPLP*GSWFSP
Trigger: GGGACTGAACCAGGAGCCCCAAGGCAGGGGTCTGGC...CTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR TCA 90 bp CCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGAGGCAGAGGGGCTTTaGGGGCAGGGCTCAGACTCT +
Preference number: 4 (lower is better)
Translates to: PGDLKAVLRGHLREGRPEEAEGL*GQGSDS
Trigger: AGAGTCTGAGCCCTGCCCTCAAAGCCCCTCTGCCTC...CTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR TCA 90 bp CTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGGTGCCAGCGAGGCAGAGGGGCTTTaGGGGCAGGGCTCAGACTCT +
Preference number: 4 (lower is better)
Translates to: LKAVLRGHLREGRPEGASEAEGL*GQGSDS
Trigger: AGAGTCTGAGCCCTGCCCTCAAAGCCCCTCTGCCTC...GCTGGCACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR TCA 90 bp CTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGGTGCCAGCTCAGCATGGGGACTGAAGCAGGCTGTCTaGGACACTGGGGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LRGHLREGRPEGASSAWGLKQAV*DTGEGG
Trigger: GCCACCTTCCCCAGTGTCTCAGACAGCCTGCTTCAG...TCCCCATGCTGAGCTGGCACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000449459.5
CDS-3UTR TCA 90 bp GGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGGTTCTCTCTGCGGGCACTaGGGGGCCAATCCCCAACCT +
Preference number: 4 (lower is better)
Translates to: GDLKAVLRGHLREGRPEGSLCGH*GANPQP
Trigger: AGGTTGGGGATTGGCCCCTCAGTGCCCGCAGAGAGA...ACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR TCA 90 bp GACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGGTGCCTCTCTCTGCGGGCACTaGGGGGCCAATCCCCAACCT +
Preference number: 4 (lower is better)
Translates to: DLKAVLRGHLREGRPEGASLCGH*GANPQP
Trigger: AGGTTGGGGATTGGCCCCTCAGTGCCCGCAGAGAGA...GGCACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR TCA 90 bp AGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTTGCTTCGAGGGCACCTaGGGGAAGGTAGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RPGDLKAVLRGHLREGRPCFEGT*GKVGLR
Trigger: CCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCA...AGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR TCA 90 bp AGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTCCCCCTCATCTGGCCTaGGACAGATGCTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: RPGDLKAVLRGHLREGRPPPHLA*DRCWSP
Trigger: TGGGCTCCAGCATCTGTCTCAGGCCAGATGAGGGGG...AGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp GACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGGTGCCGCCCCCTCAGCACTGTaGCCCCGTTCCTGTACACCA +
Preference number: 4 (lower is better)
Translates to: DLKAVLRGHLREGRPEGAAPSAL*PRSCTP
Trigger: TGGTGTACAGGAACGGGGTCACAGTGCTGAGGGGGC...GGCACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp AGTGGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAAGCTTGGGCACCTGCTaGGGCCCCATTCAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: SGDRPGDLKAVLRGHLRESLGTC*GPIQRE
Trigger: CTCCCGCTGAATGGGGCCTCAGCAGGTGCCCAAGCT...TTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp AGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTATACCCGCCTCAGCATaGCAGTGTGCCTGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: RPGDLKAVLRGHLREGRPIPASA*QCAWPP
Trigger: AGGGGGCCAGGCACACTGTCATGCTGAGGCGGGTAT...AGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR GCA 90 bp GGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGGTGGAGACCACAGTAGGTaGCCAGTCCCTCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: GDLKAVLRGHLREGRPEGGDHSR*PVPQPP
Trigger: AGGGGGCTGAGGGACTGGGCACCTACTGTGGTCTCC...ACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR GCA 90 bp GCTGAGGCCCCATTCAGCGGGAGAGCCACCAGTTGGGAGTGTGGACATGTATGGGGAGGGCCAGACCCCTaGCTTGGGGCTCCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: AEAPFSGRATSWECGHVWGGPDP*LGAPGS
Trigger: TGAACCAGGAGCCCCAAGGCAGGGGTCTGGCCCTCC...CCATACATGTCCACACTCCCAACTGGTGGCTCTCCCGCTGAATGGGGCCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp CGGAAGAGGCCCCGGGGCCAGCCAGGCCGTAGGGTAAGGGCCACCTGGGCATCAAATTACCATGCCCAGTaGTGGGGTGGAGAAACAGAG +
Preference number: 4 (lower is better)
Translates to: RKRPRGQPGRRVRATWASNYHAQ*WGGETE
Trigger: CTCTGTTTCTCCACCCCAGCACTGGGCATGGTAATT...TGATGCCCAGGTGGCCCTTACCCTACGGCCTGGCTGGCCCCGGGGCCTCTTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp CCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGAGTCCTCAACACTCTaGCCTGCCCTGGCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: PGDLKAVLRGHLREGRPEESSTL*PALAKP
Trigger: GGGCTTGGCCAGGGCAGGGCAGAGTGTTGAGGACTC...CTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR CCA 90 bp CGGAAGAGGCCCCGGGGCCAGCCAGGCCGTAGGGTAAGGGCCACCTGGGCATCAATTCCTTGCAAAGTTTaGGTGCAGCAGCGACCTCCA +
Preference number: 4 (lower is better)
Translates to: RKRPRGQPGRRVRATWASIPCKV*VQQRPP
Trigger: TGGAGGTCGCTGCTGCACCCAAACTTTGCAAGGAAT...TGATGCCCAGGTGGCCCTTACCCTACGGCCTGGCTGGCCCCGGGGCCTCTTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000449459.5
CDS-3UTR CCA 90 bp CTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGGTGCCAGCCTGCTCCCATCCACATaGATCCGGTGCAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LKAVLRGHLREGRPEGASLLPST*IRCRPW
Trigger: CCAGGGCCTGCACCGGATCCATGTGGATGGGAGCAG...GCTGGCACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000442235.6
CDS-3UTR CCA 90 bp TGGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGCGGGCTGCGTCAGGCTaGGACCCACCTCTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: WRQARGPQSSASRAPEGRRAASG*DPPLRV
Trigger: AACTCTGAGAGGTGGGTCCCAGCCTGACGCAGCCCG...CCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000449459.5
CDS-3UTR CCA 90 bp AGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGGTGCCAGCTCAGCATaGGGAAGTGGCTGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: RPGDLKAVLRGHLREGRPGASSA*GSGWRA
Trigger: AGCCCTCCAGCCACTTCCCCATGCTGAGCTGGCACC...AGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442235.6
CDS-3UTR TCA 90 bp AGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTCTGAAGCAGGCTGTCTaGGACACTGGGGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: RPGDLKAVLRGHLREGRPLKQAV*DTGEGG
Trigger: GCCACCTTCCCCAGTGTCTCAGACAGCCTGCTTCAG...AGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR TCA 90 bp GACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGGTGCCCAGATTCCTCCTCGCTaGCCCTGCAGTGTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: DLKAVLRGHLREGRPEGAQIPPR*PCSVRW
Trigger: CCACCTCACACTGCAGGGTCAGCGAGGAGGAATCTG...GGCACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424122.5
CDS-3UTR TCA 90 bp AGGGATATATACATGGCCCTGCCCTATGAGGGACCGGTGCCCCCTCATCTGGCCTGCTTCGAGGGCACCTaGGGGAAGGTAGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RDIYMALPYEGPVPPHLACFEGT*GKVGLR
Trigger: CCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCA...GGCCAGATGAGGGGGCACCGGTCCCTCATAGGGCAGGGCCATGTATATATCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp TGTAGTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCCCCGGGGCCAGCCAGGCAGGTATGAACAGTATTaGGCAAGACCCACAGGGCAG +
Preference number: 4 (lower is better)
Translates to: CSPIKALPRRKRPRGQPGRYEQY*ARPTGQ
Trigger: CTGCCCTGTGGGTCTTGCTCAATACTGTTCATACCT...GCCTGGCTGGCCCCGGGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGACTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp GGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTGGCTCCCCACAGTACTaGTCCAAACGCTCCTGTCGC +
Preference number: 4 (lower is better)
Translates to: GDRPGDLKAVLRGHLREGGSPQY*SKRSCR
Trigger: GCGACAGGAGCGTTTGGAGCAGTACTGTGGGGAGCC...ACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR GCA 90 bp GACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGGTGCCCAGCAGTCCCGGAGATaGCTTTGGACTCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: DLKAVLRGHLREGRPEGAQQSRR*LWTLLG
Trigger: CCCCAGCAGAGTCCAAAGGCATCTCCGGGACTGCTG...GGCACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
CDS-3UTR CCA 90 bp GACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCGCCCCACAGTCTTTaGAATCGGCGCCATCGCATC +
Preference number: 4 (lower is better)
Translates to: DRPGDLKAVLRGHLREGRPPHSL*NRRHRI
Trigger: GATGCGATGGCGCCGATTCCAAAGACTGTGGGGCGG...CCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR CCA 90 bp AGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTCCTCCAGTGGGCAGCTaGGCCGTAGAGAGCAGTCTA +
Preference number: 4 (lower is better)
Translates to: RPGDLKAVLRGHLREGRPPPVGS*AVESSL
Trigger: TAGACTGCTCTCTACGGCCCAGCTGCCCACTGGAGG...AGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR CCA 90 bp TGGTCCTGGGGGTTGAGCTTCAAGGCCTGGGTGAAGAGGACCACGGCCTCATGGCCTCCAGTGGGCAGCTaGGCCGTAGAGAGCAGTCTA +
Preference number: 4 (lower is better)
Translates to: WSWGLSFKAWVKRTTASWPPVGS*AVESSL
Trigger: TAGACTGCTCTCTACGGCCCAGCTGCCCACTGGAGG...CCATGAGGCCGTGGTCCTCTTCACCCAGGCCTTGAAGCTCAACCCCCAGGACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
CDS-3UTR CCA 90 bp GACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGGTGCCATCCGGTGCAGGCCCTaGGGATCACTCTCCACAAGC +
Preference number: 4 (lower is better)
Translates to: DLKAVLRGHLREGRPEGAIRCRP*GSLSTS
Trigger: GCTTGTGGAGAGTGATCCCCAGGGCCTGCACCGGAT...GGCACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000442235.6
CDS-3UTR CCA 90 bp CCCAGACCTATTACCTGTAGTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCCCCTGCTCCCATCCACATaGATCCGGTGCAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PRPITCSPIKALPRRKRPLLPST*IRCRPW
Trigger: CCAGGGCCTGCACCGGATCCATGTGGATGGGAGCAG...GGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGACTACAGGTAATAGGTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410003.5
CDS-3UTR TCA 90 bp CCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGCTCTCATCTCCATCTaGGGTAGTGCTGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PGDLKAVLRGHLREGRPEALISI*GSAGLG
Trigger: CCCAAGGCCAGCACTACCTCAGATGGAGATGAGAGC...CTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR TCA 90 bp TGGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGGCTCTCATCTCCATCTaGGGTAGTGCTGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: WRQARGPQSSASRAPEGRALISI*GSAGLG
Trigger: CCCAAGGCCAGCACTACCTCAGATGGAGATGAGAGC...CCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR TCA 90 bp GACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGTCACCACACTGTCCCTaGACTGGGTTTCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: DRPGDLKAVLRGHLREGRSPHCP*TGFPGL
Trigger: CAGCCCTGGAAACCCAGTTCAGGGACAGTGTGGTGA...CCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR TCA 90 bp CTGGTACCCAACTTTGCCAGTTCCTGGCTCTGTTGTAAGGCAGCTGCCAGCAGTAGGGCCCACGCTGGCTaGCCCAACCGCTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: LVPNFASSWLCCKAAASSRAHAG*PNRSWQ
Trigger: CTGCCATGAGCGGTTGGGTCAGCCAGCGTGGGCCCT...ACTGCTGGCAGCTGCCTTACAACAGAGCCAGGAACTGGCAAAGTTGGGTACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
CDS-3UTR TCA 90 bp AGCCCCAGACCTATTACCTGTAGTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCTGGAGGGCCCCAGGTaGCAGAGGTGGTGCACAGAT +
Preference number: 4 (lower is better)
Translates to: SPRPITCSPIKALPRRKRLEGPR*QRWCTD
Trigger: ATCTGTGCACCACCTCTGTCACCTGGGGCCCTCCAG...CCTCTTCCGCCTGGGCAAGGCCTTGATGGGACTACAGGTAATAGGTCTGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR TCA 90 bp CGGAAGAGGCCCCGGGGCCAGCCAGGCCGTAGGGTAAGGGCCACCTGGGCATCACCTCCAGAAGAAGCTTaGGAACCAAAGGATGTTTCA +
Preference number: 4 (lower is better)
Translates to: RKRPRGQPGRRVRATWASPPEEA*EPKDVS
Trigger: TGAAACATCCTTTGGTTCTCAAGCTTCTTCTGGAGG...TGATGCCCAGGTGGCCCTTACCCTACGGCCTGGCTGGCCCCGGGGCCTCTTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp AGTGGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAACAGCAGCTGCCTCTCTaGAGCGCTTTGGTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: SGDRPGDLKAVLRGHLREQQLPL*SALVPE
Trigger: CTCTGGGACCAAAGCGCTTCAGAGAGGCAGCTGCTG...TTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR TCA 90 bp CACCAAGGGATATATACATGGCCCTGCCCTATGAGGGACCGGTGCCCCCTCATCATACCCGCCTCAGCATaGCAGTGTGCCTGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: HQGIYTWPCPMRDRCPLIIPASA*QCAWPP
Trigger: AGGGGGCCAGGCACACTGTCATGCTGAGGCGGGTAT...GATGAGGGGGCACCGGTCCCTCATAGGGCAGGGCCATGTATATATCCCTTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000410003.5
CDS-3UTR GCA 90 bp ACTTTGCCAGTTCCTGGCTCTGTTGTAAGGCAGCTGCCAGCAGTCCCGGAGATGGGAGGGCCAGACCCCTaGCTTGGGGCTCCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: TLPVPGSVVRQLPAVPEMGGPDP*LGAPGS
Trigger: TGAACCAGGAGCCCCAAGGCAGGGGTCTGGCCCTCC...CATCTCCGGGACTGCTGGCAGCTGCCTTACAACAGAGCCAGGAACTGGCAAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
CDS-3UTR GCA 90 bp GAGGCCTCATGTAAGGAGGCAGATTCCTACCTAGGCAGCACAGTAGGATTCCAGGCGGAGCTCTCGGGCTaGGTCAGGCTGGGACCCACC +
Preference number: 4 (lower is better)
Translates to: EASCKEADSYLGSTVGFQAELSG*VRLGPT
Trigger: GGTGGGTCCCAGCCTGACGCAGCCCGAGAGCTCCGC...CTGGAATCCTACTGTGCTGCCTAGGTAGGAATCTGCCTCCTTACATGAGGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449459.5
CDS-3UTR CCA 90 bp AGTGGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGAGCTTCTGGGGCATaGCCACCTGAAGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SGDRPGDLKAVLRGHLREGASGA*PPEAGC
Trigger: ACAGCCTGCTTCAGGTGGCCATGCCCCAGAAGCTCC...TTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR CCA 90 bp TGGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGGTTTCCAGGGCTGGATaGGGGGCTCTCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: WRQARGPQSSASRAPEGRVSRAG*GALISI
Trigger: GATGGAGATGAGAGCCCCCCATCCAGCCCTGGAAAC...CCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR CCA 90 bp TGGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGCTGCCTTGGGGCTCCTaGTTCAGTCCCTTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: WRQARGPQSSASRAPEGRLPWGS*FSPFSL
Trigger: CAGAGAGAAGGGACTGAACCAGGAGCCCCAAGGCAG...CCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR CCA 90 bp ACTTTGCCAGTTCCTGGCTCTGTTGTAAGGCAGCTGCCAGCAGTCCCGGAGATGAGGGTAAGGGCCACCTaGGCATCAGCCAGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: TLPVPGSVVRQLPAVPEMRVRAT*ASARAH
Trigger: GTGGGCCCTGGCTGATGCCCAGGTGGCCCTTACCCT...CATCTCCGGGACTGCTGGCAGCTGCCTTACAACAGAGCCAGGAACTGGCAAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
CDS-3UTR CCA 90 bp AGGGATATATACATGGCCCTGCCCTATGAGGGACCGGTGCCCCCTCATCTGGCCCGGTGCCCCCTCATCTaGCCTGAGACAGATGCTGGA +
Preference number: 4 (lower is better)
Translates to: RDIYMALPYEGPVPPHLARCPLI*PETDAG
Trigger: TCCAGCATCTGTCTCAGGCCAGATGAGGGGGCACCG...GGCCAGATGAGGGGGCACCGGTCCCTCATAGGGCAGGGCCATGTATATATCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp CTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGGTGCCAGCTCAGCATGGGGACTTACCAGTGTGAGGTaGAGAAGGCAAGAGCGGAGC +
Preference number: 4 (lower is better)
Translates to: LRGHLREGRPEGASSAWGLTSVR*RRQERS
Trigger: GCTCCGCTCTTGCCTTCTCCACCTCACACTGGTAAG...TCCCCATGCTGAGCTGGCACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR CCA 90 bp CTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGGTGCCAGCGCATGGGGAAGTGGCTaGAGGGCTCTCTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: LKAVLRGHLREGRPEGASAWGSG*RALFLL
Trigger: CAAGAGGAAGAGAGCCCTCCAGCCACTTCCCCATGC...GCTGGCACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442235.6
CDS-3UTR CCA 90 bp GACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCTCAGCATGGGGAAGTaGCTGGAGGGCTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: DRPGDLKAVLRGHLREGRLSMGK*LEGSLP
Trigger: AGGAAGAGAGCCCTCCAGCCACTTCCCCATGCTGAG...CCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442235.6
CDS-3UTR CCA 90 bp TGGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGCCCCTTGTGTCCTCCTaGCAAGAGAGTCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: WRQARGPQSSASRAPEGRPLVSS*QESPLQ
Trigger: CTGCAGTGGACTCTCTTGCCAGGAGGACACAAGGGG...CCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449459.5
CDS-3UTR TCA 90 bp CCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGAGAGCAGTCTAGCTTaGTCCGCCCCACAGTCTTTG +
Preference number: 4 (lower is better)
Translates to: PGDLKAVLRGHLREGRPEESSLA*SAPQSL
Trigger: CAAAGACTGTGGGGCGGATCAAGCTAGACTGCTCTC...CTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR TCA 90 bp GACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGGAGAGCAGTCTAGCTTaGTCCGCCCCACAGTCTTTG +
Preference number: 4 (lower is better)
Translates to: DRPGDLKAVLRGHLREGRESSLA*SAPQSL
Trigger: CAAAGACTGTGGGGCGGATCAAGCTAGACTGCTCTC...CCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR TCA 90 bp CCCAGACCTATTACCTGTAGTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCCCTCACCACACTGTCCCTaGACTGGGTTTCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PRPITCSPIKALPRRKRPSPHCP*TGFPGL
Trigger: CAGCCCTGGAAACCCAGTTCAGGGACAGTGTGGTGA...GGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGACTACAGGTAATAGGTCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR TCA 90 bp CCTTTCTCTCATCAGAAGCTTCCCCATGGCAAGAGGAATGACTGCCAGGGCATCAGGGCCCACGCTGGCTaGCCCAACCGCTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: PFSHQKLPHGKRNDCQGIRAHAG*PNRSWQ
Trigger: CTGCCATGAGCGGTTGGGTCAGCCAGCGTGGGCCCT...GATGCCCTGGCAGTCATTCCTCTTGCCATGGGGAAGCTTCTGATGAGAGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp ACTTTGCCAGTTCCTGGCTCTGTTGTAAGGCAGCTGCCAGCAGTCCCGGAGATGTGCTTCGAGGGCACCTaGGGGAAGGTAGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: TLPVPGSVVRQLPAVPEMCFEGT*GKVGLR
Trigger: CCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCA...CATCTCCGGGACTGCTGGCAGCTGCCTTACAACAGAGCCAGGAACTGGCAAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
CDS-3UTR TCA 90 bp CTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGGTGCCAGCCCAAGCTCTAGTTGGTaGATGAGGTCCCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: LKAVLRGHLREGRPEGASPSSSW*MRSPGP
Trigger: TGGTCCAGGGGACCTCATTCACCAACTAGAGCTTGG...GCTGGCACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp AGTGGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAAGGTGGCCAAAGGTCTaGGTCCTCAACACTCTGCCC +
Preference number: 4 (lower is better)
Translates to: SGDRPGDLKAVLRGHLRERWPKV*VLNTLP
Trigger: GGGCAGAGTGTTGAGGACTCAGACCTTTGGCCACCT...TTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR TCA 90 bp TGTAGTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCCCCGGGGCCAGCCAGGCGTACCACAACCATTGTaGCACTTTGGTACTAGAAGC +
Preference number: 4 (lower is better)
Translates to: CSPIKALPRRKRPRGQPGVPQPL*HFGTRS
Trigger: GCTTCTAGTACCAAAGTGTCACAATGGTTGTGGTAC...GCCTGGCTGGCCCCGGGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGACTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR GCA 90 bp AGGGATATATACATGGCCCTGCCCTATGAGGGACCGGTGCCCCCTCATCTGGCCCTCAGCATGACAGTGTaGCTGGCCCCCTTACCAGTG +
Preference number: 4 (lower is better)
Translates to: RDIYMALPYEGPVPPHLALSMTV*LAPLPV
Trigger: CACTGGTAAGGGGGCCAGGCACACTGTCATGCTGAG...GGCCAGATGAGGGGGCACCGGTCCCTCATAGGGCAGGGCCATGTATATATCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000410003.5
CDS-3UTR GCA 90 bp CTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGGTGCCAGCTCAGCATGGGGATGCACCCTCCAGCCATaGTCTAGCCACCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LRGHLREGRPEGASSAWGCTLQP*SSHLLL
Trigger: AAGAAGAAGGTGGCTAGAGCATGGCTGGAGGGTGCA...TCCCCATGCTGAGCTGGCACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449459.5
CDS-3UTR CCA 90 bp AGCCCCAGACCTATTACCTGTAGTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCCGCCCCACAGTCTTTaGAATCGGCGCCATCGCATC +
Preference number: 4 (lower is better)
Translates to: SPRPITCSPIKALPRRKRPPHSL*NRRHRI
Trigger: GATGCGATGGCGCCGATTCCAAAGACTGTGGGGCGG...CCTCTTCCGCCTGGGCAAGGCCTTGATGGGACTACAGGTAATAGGTCTGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR CCA 90 bp GGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTCAGGGCTCAGACTCTTaGGGAGGATACAGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: GDRPGDLKAVLRGHLREGQGSDS*GGYRKD
Trigger: GTCCTTCCTGTATCCTCCCCAAGAGTCTGAGCCCTG...ACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR CCA 90 bp TGGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGCCTCAGCCAGGCGATTaGCTTCCTCTTCTGTCACCA +
Preference number: 4 (lower is better)
Translates to: WRQARGPQSSASRAPEGRPQPGD*LPLLSP
Trigger: TGGTGACAGAAGAGGAAGCCAATCGCCTGGCTGAGG...CCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR CCA 90 bp TGGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGACACTGTCCCTGAACTaGGTTTCCAGGGCTGGATGG +
Preference number: 4 (lower is better)
Translates to: WRQARGPQSSASRAPEGRTLSLN*VSRAGW
Trigger: CCATCCAGCCCTGGAAACCCAGTTCAGGGACAGTGT...CCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR CCA 90 bp CCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGACACTGTCCCTGAACTaGGTTTCCAGGGCTGGATGG +
Preference number: 4 (lower is better)
Translates to: PGDLKAVLRGHLREGRPETLSLN*VSRAGW
Trigger: CCATCCAGCCCTGGAAACCCAGTTCAGGGACAGTGT...CTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR CCA 90 bp TGGTCCTGGGGGTTGAGCTTCAAGGCCTGGGTGAAGAGGACCACGGCCTCATGGACACTGTCCCTGAACTaGGTTTCCAGGGCTGGATGG +
Preference number: 4 (lower is better)
Translates to: WSWGLSFKAWVKRTTASWTLSLN*VSRAGW
Trigger: CCATCCAGCCCTGGAAACCCAGTTCAGGGACAGTGT...CCATGAGGCCGTGGTCCTCTTCACCCAGGCCTTGAAGCTCAACCCCCAGGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
CDS-3UTR TCA 90 bp CCCAGACCTATTACCTGTAGTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCCCGAGAGCAGTCTAGCTTaGTCCGCCCCACAGTCTTTG +
Preference number: 4 (lower is better)
Translates to: PRPITCSPIKALPRRKRPESSLA*SAPQSL
Trigger: CAAAGACTGTGGGGCGGATCAAGCTAGACTGCTCTC...GGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGACTACAGGTAATAGGTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR TCA 90 bp GGGGCTCCTTTCTCTCATCAGAAGCTTCCCCATGGCAAGAGGAATGACTGCCAGGCCCCCTCAGCACTGTaGCCCCGTTCCTGTACACCA +
Preference number: 4 (lower is better)
Translates to: GAPFSHQKLPHGKRNDCQAPSAL*PRSCTP
Trigger: TGGTGTACAGGAACGGGGTCACAGTGCTGAGGGGGC...CTGGCAGTCATTCCTCTTGCCATGGGGAAGCTTCTGATGAGAGAAAGGAGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp TCCAGCCCCAGACCTATTACCTGTAGTCCCATCAAGGCCTTGCCCAGGCGGAAGCCCTCCTTAGCCACCTaGGGCTTGGTATTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: SSPRPITCSPIKALPRRKPSLAT*GLVLQS
Trigger: GGACTGCAATACCAAGCCTCAGGTGGCTAAGGAGGG...CTTCCGCCTGGGCAAGGCCTTGATGGGACTACAGGTAATAGGTCTGGGGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR GCA 90 bp GGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTGATACAGGAAGGACTTaGGGAGACCACAGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: GDRPGDLKAVLRGHLREGDTGRT*GDHSRC
Trigger: GCACCTACTGTGGTCTCCGCAAGTCCTTCCTGTATC...ACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR GCA 90 bp TGGTCCTGGGGGTTGAGCTTCAAGGCCTGGGTGAAGAGGACCACGGCCTCATGGGATACAGGAAGGACTTaGGGAGACCACAGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: WSWGLSFKAWVKRTTASWDTGRT*GDHSRC
Trigger: GCACCTACTGTGGTCTCCGCAAGTCCTTCCTGTATC...CCATGAGGCCGTGGTCCTCTTCACCCAGGCCTTGAAGCTCAACCCCCAGGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
CDS-3UTR GCA 90 bp GGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTGCCAATCCCCAACCTTaGGCAAAGCCAGAGACACAA +
Preference number: 4 (lower is better)
Translates to: GDRPGDLKAVLRGHLREGANPQP*AKPETQ
Trigger: TTGTGTCTCTGGCTTTGCGCAAGGTTGGGGATTGGC...ACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR GCA 90 bp GACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGGCCAATCCCCAACCTTaGGCAAAGCCAGAGACACAA +
Preference number: 4 (lower is better)
Translates to: DRPGDLKAVLRGHLREGRANPQP*AKPETQ
Trigger: TTGTGTCTCTGGCTTTGCGCAAGGTTGGGGATTGGC...CCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR GCA 90 bp GGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGGTGCTGGTACCCAACTTTaGCAGTTCCTGGCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: GDLKAVLRGHLREGRPEGAGTQL*QFLALL
Trigger: CAACAGAGCCAGGAACTGGCAAAGTTGGGTACCAGC...ACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000449459.5
CDS-3UTR GCA 90 bp TTAACATGGGGAAAGGCTAATTACCATGCCCAGTGCTGGGGTGGAGAAACAGAGGCGGAGCTCTCGGGCTaGGTCAGGCTGGGACCCACC +
Preference number: 4 (lower is better)
Translates to: LTWGKANYHAQCWGGETEAELSG*VRLGPT
Trigger: GGTGGGTCCCAGCCTGACGCAGCCCGAGAGCTCCGC...CTCTGTTTCTCCACCCCAGCACTGGGCATGGTAATTAGCCTTTCCCCATGTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp CTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGGTGCCAGCCCTGAGGCTTGGTATTaGAGTCCCAGCCAATTCTCC +
Preference number: 4 (lower is better)
Translates to: LKAVLRGHLREGRPEGASPEAWY*SPSQFS
Trigger: GGAGAATTGGCTGGGACTGCAATACCAAGCCTCAGG...GCTGGCACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR GCA 90 bp GGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGGTCCTGAGGCTTGGTATTaGAGTCCCAGCCAATTCTCC +
Preference number: 4 (lower is better)
Translates to: GDLKAVLRGHLREGRPEGPEAWY*SPSQFS
Trigger: GGAGAATTGGCTGGGACTGCAATACCAAGCCTCAGG...ACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR GCA 90 bp GACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGGTGCCGGATTCCAGAACCACTaGACCAGATGGCCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: DLKAVLRGHLREGRPEGAGFQNH*TRWPVR
Trigger: TCTCACAGGCCATCTGGTGCAGTGGTTCTGGAATCC...GGCACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449459.5
CDS-3UTR CCA 90 bp AGTGGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAACAGGGCTCAGACTCTTaGGGAGGATACAGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: SGDRPGDLKAVLRGHLREQGSDS*GGYRKD
Trigger: GTCCTTCCTGTATCCTCCCCAAGAGTCTGAGCCCTG...TTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR CCA 90 bp TCCAGCCCCAGACCTATTACCTGTAGTCCCATCAAGGCCTTGCCCAGGCGGAAGGTTTCCAGGGCTGGATaGGGGGCTCTCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: SSPRPITCSPIKALPRRKVSRAG*GALISI
Trigger: GATGGAGATGAGAGCCCCCCATCCAGCCCTGGAAAC...CTTCCGCCTGGGCAAGGCCTTGATGGGACTACAGGTAATAGGTCTGGGGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR CCA 90 bp CACCAAGGGATATATACATGGCCCTGCCCTATGAGGGACCGGTGCCCCCTCATCCTGCCTTGGGGCTCCTaGTTCAGTCCCTTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: HQGIYTWPCPMRDRCPLILPWGS*FSPFSL
Trigger: CAGAGAGAAGGGACTGAACCAGGAGCCCCAAGGCAG...GATGAGGGGGCACCGGTCCCTCATAGGGCAGGGCCATGTATATATCCCTTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp TCTCTCCTGTTTCCAGCCCCAGACCTATTACCTGTAGTCCCATCAAGGCCTTGCGCCAGACCCCTGCCTTaGGGCTCCTGGTTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: SLLFPAPDLLPVVPSRPCARPLP*GSWFSP
Trigger: GGGACTGAACCAGGAGCCCCAAGGCAGGGGTCTGGC...GCAAGGCCTTGATGGGACTACAGGTAATAGGTCTGGGGCTGGAAACAGGAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR CCA 90 bp CCTTTCTCTCATCAGAAGCTTCCCCATGGCAAGAGGAATGACTGCCAGGGCATCAGCCAGGGCCCACGCTaGCTGACCCAACCGCTCATG +
Preference number: 4 (lower is better)
Translates to: PFSHQKLPHGKRNDCQGISQGPR*LTQPLM
Trigger: CATGAGCGGTTGGGTCAGCCAGCGTGGGCCCTGGCT...GATGCCCTGGCAGTCATTCCTCTTGCCATGGGGAAGCTTCTGATGAGAGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp AGTGGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGGAGAGCCACCAGTTaGGAGTGTGGACATGTATGG +
Preference number: 4 (lower is better)
Translates to: SGDRPGDLKAVLRGHLREGRATS*ECGHVW
Trigger: CCATACATGTCCACACTCCCAACTGGTGGCTCTCCC...TTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp ACTTTGCCAGTTCCTGGCTCTGTTGTAAGGCAGCTGCCAGCAGTCCCGGAGATGTCCCGGAGATGCCTTTaGACTCTGCTGGGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: TLPVPGSVVRQLPAVPEMSRRCL*TLLGPL
Trigger: GAGAGGCCCCAGCAGAGTCCAAAGGCATCTCCGGGA...CATCTCCGGGACTGCTGGCAGCTGCCTTACAACAGAGCCAGGAACTGGCAAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
CDS-3UTR TCA 90 bp TGGGGTGGCTTCGGTGACATGAAGGATAATGCAAGAGTGGAGACAGGCCAGGGGTCACCACACTGTCCCTaGACTGGGTTTCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: WGGFGDMKDNARVETGQGSPHCP*TGFPGL
Trigger: CAGCCCTGGAAACCCAGTTCAGGGACAGTGTGGTGA...CCCCTGGCCTGTCTCCACTCTTGCATTATCCTTCATGTCACCGAAGCCACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp AACTTTGCCAGTTCCTGGCTCTGTTGTAAGGCAGCTGCCAGCAGTCCCGGAGATGCTTCAAGGCCTGGGTaGAGAGGACCACGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: NFASSWLCCKAAASSPGDASRPG*RGPRPH
Trigger: ATGAGGCCGTGGTCCTCTTCACCCAGGCCTTGAAGC...ATCTCCGGGACTGCTGGCAGCTGCCTTACAACAGAGCCAGGAACTGGCAAAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
CDS-3UTR TCA 90 bp AGTGGATGTGGGGCTCCTTTCTCTCATCAGAAGCTTCCCCATGGCAAGAGGAATAGCTTGGGCACCTGCTaGGGCCCCATTCAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: SGCGAPFSHQKLPHGKRNSLGTC*GPIQRE
Trigger: CTCCCGCTGAATGGGGCCTCAGCAGGTGCCCAAGCT...ATTCCTCTTGCCATGGGGAAGCTTCTGATGAGAGAAAGGAGCCCCACATCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp AGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTAGACCCACATTTAAATaGGCTGACAGTCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RPGDLKAVLRGHLREGRPRPTFK*ADSPSR
Trigger: CCTGCTGGGACTGTCAGCTCATTTAAATGTGGGTCT...AGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp AGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTAGGTATGAACAGTATTaGGCAAGACCCACAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RPGDLKAVLRGHLREGRPRYEQY*ARPTGQ
Trigger: CTGCCCTGTGGGTCTTGCTCAATACTGTTCATACCT...AGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp TTCCTGAAACACAGCAGCTGCCTCTCTGAAGCGCTTTGGTCCCAGAGGGATCAGGCCCCCTTACCAGTGTaGGGTGGAGAAGGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: FLKHSSCLSEALWSQRDQAPLPV*GGEGKS
Trigger: GCTCTTGCCTTCTCCACCTCACACTGGTAAGGGGGC...CTGATCCCTCTGGGACCAAAGCGCTTCAGAGAGGCAGCTGCTGTGTTTCAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR TCA 90 bp CTACCGGTGGTCCTGGGGGTTGAGCTTCAAGGCCTGGGTGAAGAGGACCACGGCCGCTTCCGTTCCTTTTaGCGCTGCAATAGTAATGGT +
Preference number: 4 (lower is better)
Translates to: LPVVLGVELQGLGEEDHGRFRSF*RCNSNG
Trigger: ACCATTACTATTGCAGCGTCAAAAGGAACGGAAGCG...GCCGTGGTCCTCTTCACCCAGGCCTTGAAGCTCAACCCCCAGGACCACCGGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449459.5
CDS-3UTR GCA 90 bp CCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGCTGGACCGAATTCCTTaGAAAGTTTGGGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PGDLKAVLRGHLREGRPELDRIP*KVWVQQ
Trigger: CTGCTGCACCCAAACTTTGCAAGGAATTCGGTCCAG...CTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR GCA 90 bp AGTGGATGTGGGGCTCCTTTCTCTCATCAGAAGCTTCCCCATGGCAAGAGGAATGCTGCAGCCGCCCGCTaGTCCCATCCACATGGATCC +
Preference number: 4 (lower is better)
Translates to: SGCGAPFSHQKLPHGKRNAAAAR*SHPHGS
Trigger: GGATCCATGTGGATGGGAGCAGCGGGCGGCTGCAGC...ATTCCTCTTGCCATGGGGAAGCTTCTGATGAGAGAAAGGAGCCCCACATCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000233623.11
ENST00000410003.5
CDS-3UTR GCA 90 bp GCTGAGGCCCCATTCAGCGGGAGAGCCACCAGTTGGGAGTGTGGACATGTATGGGATACAGGAAGGACTTaGGGAGACCACAGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: AEAPFSGRATSWECGHVWDTGRT*GDHSRC
Trigger: GCACCTACTGTGGTCTCCGCAAGTCCTTCCTGTATC...CCATACATGTCCACACTCCCAACTGGTGGCTCTCCCGCTGAATGGGGCCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp ACAGCAGCTGCCTCTCTGAAGCGCTTTGGTCCCAGAGGGATCAGAAAGAAAAGAGGAGGGCCAGACCCCTaGCTTGGGGCTCCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: TAAASLKRFGPRGIRKKRGGPDP*LGAPGS
Trigger: TGAACCAGGAGCCCCAAGGCAGGGGTCTGGCCCTCC...TCTTTTCTTTCTGATCCCTCTGGGACCAAAGCGCTTCAGAGAGGCAGCTGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR GCA 90 bp ACAGCAGCTGCCTCTCTGAAGCGCTTTGGTCCCAGAGGGATCAGAAAGAAAAGAGTCCCATCAAGGCCTTaGCCAGGCGGAAGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: TAAASLKRFGPRGIRKKRVPSRP*PGGRGP
Trigger: GGGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGAC...TCTTTTCTTTCTGATCCCTCTGGGACCAAAGCGCTTCAGAGAGGCAGCTGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR GCA 90 bp CTGGTACCCAACTTTGCCAGTTCCTGGCTCTGTTGTAAGGCAGCTGCCAGCAGTCAGCAGTCCCGGAGATaGCTTTGGACTCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LVPNFASSWLCCKAAASSQQSRR*LWTLLG
Trigger: CCCCAGCAGAGTCCAAAGGCATCTCCGGGACTGCTG...ACTGCTGGCAGCTGCCTTACAACAGAGCCAGGAACTGGCAAAGTTGGGTACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
CDS-3UTR CCA 90 bp AGTGGATGTGGGGCTCCTTTCTCTCATCAGAAGCTTCCCCATGGCAAGAGGAATGCCAGACCCCTGCCTTaGGGCTCCTGGTTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: SGCGAPFSHQKLPHGKRNARPLP*GSWFSP
Trigger: GGGACTGAACCAGGAGCCCCAAGGCAGGGGTCTGGC...ATTCCTCTTGCCATGGGGAAGCTTCTGATGAGAGAAAGGAGCCCCACATCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp CTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGGTGCCAGCTCAGCATGGGGAAACTTTGCCAGTTCCTaGCTCTGTTGTAAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LRGHLREGRPEGASSAWGNFASS*LCCKAA
Trigger: AGCTGCCTTACAACAGAGCCAGGAACTGGCAAAGTT...TCCCCATGCTGAGCTGGCACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000449459.5
CDS-3UTR CCA 90 bp TGGGGTGGCTTCGGTGACATGAAGGATAATGCAAGAGTGGAGACAGGCCAGGGGTTGAGCTTCAAGGCCTaGGTGAAGAGGACCACGGCC +
Preference number: 4 (lower is better)
Translates to: WGGFGDMKDNARVETGQGLSFKA*VKRTTA
Trigger: GGCCGTGGTCCTCTTCACCCAGGCCTTGAAGCTCAA...CCCCTGGCCTGTCTCCACTCTTGCATTATCCTTCATGTCACCGAAGCCACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp CCCACAGTACTGCTCCAAACGCTCCTGTCGCTTCCGTTCCTTTTGACGCTGCAAACCTACCGGTGGTCCTaGGGGTTGAGCTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: PTVLLQTLLSLPFLLTLQTYRWS*GLSFKA
Trigger: GGCCTTGAAGCTCAACCCCCAGGACCACCGGTAGGT...TTGCAGCGTCAAAAGGAACGGAAGCGACAGGAGCGTTTGGAGCAGTACTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449459.5
CDS-3UTR CCA 90 bp GGGGCTCCTTTCTCTCATCAGAAGCTTCCCCATGGCAAGAGGAATGACTGCCAGTCCCGGAGATGCCTTTaGACTCTGCTGGGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: GAPFSHQKLPHGKRNDCQSRRCL*TLLGPL
Trigger: GAGAGGCCCCAGCAGAGTCCAAAGGCATCTCCGGGA...CTGGCAGTCATTCCTCTTGCCATGGGGAAGCTTCTGATGAGAGAAAGGAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424122.5
CDS-3UTR GCA 90 bp TTAACATGGGGAAAGGCTAATTACCATGCCCAGTGCTGGGGTGGAGAAACAGAGTCATGGTGCCACAGCTaGAGCCGCCCGCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: LTWGKANYHAQCWGGETESWCHS*SRPLLP
Trigger: TGGGAGCAGCGGGCGGCTGCAGCTGTGGCACCATGA...CTCTGTTTCTCCACCCCAGCACTGGGCATGGTAATTAGCCTTTCCCCATGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000233623.11
ENST00000410003.5
CDS-3UTR GCA 90 bp ACAGCAGCTGCCTCTCTGAAGCGCTTTGGTCCCAGAGGGATCAGAAAGAAAAGAGGAGACCACAGTAGGTaGCCAGTCCCTCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: TAAASLKRFGPRGIRKKRGDHSR*PVPQPP
Trigger: AGGGGGCTGAGGGACTGGGCACCTACTGTGGTCTCC...TCTTTTCTTTCTGATCCCTCTGGGACCAAAGCGCTTCAGAGAGGCAGCTGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR GCA 90 bp ATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATGGGCGGAGCTCTCGGGCTaGGTCAGGCTGGGACCCACC +
Preference number: 4 (lower is better)
Translates to: ICSELSPHYVPHQGIYTWAELSG*VRLGPT
Trigger: GGTGGGTCCCAGCCTGACGCAGCCCGAGAGCTCCGC...CCATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR GCA 90 bp CCCATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATCTCAACACTCTGCCCTaGCCTGGCCAAGCCCCCACC +
Preference number: 4 (lower is better)
Translates to: PIQGDPAGNGRLHPATQYLNTLP*PGQAPT
Trigger: GGTGGGGGCTTGGCCAGGGCAGGGCAGAGTGTTGAG...ATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410003.5
CDS-3UTR CCA 90 bp CCTTTCTCTCATCAGAAGCTTCCCCATGGCAAGAGGAATGACTGCCAGGGCATCCCTCCAGTGGGCAGCTaGGCCGTAGAGAGCAGTCTA +
Preference number: 4 (lower is better)
Translates to: PFSHQKLPHGKRNDCQGIPPVGS*AVESSL
Trigger: TAGACTGCTCTCTACGGCCCAGCTGCCCACTGGAGG...GATGCCCTGGCAGTCATTCCTCTTGCCATGGGGAAGCTTCTGATGAGAGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp AGTGGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAATTCCTTGCAAAGTTTaGGTGCAGCAGCGACCTCCA +
Preference number: 4 (lower is better)
Translates to: SGDRPGDLKAVLRGHLREIPCKV*VQQRPP
Trigger: TGGAGGTCGCTGCTGCACCCAAACTTTGCAAGGAAT...TTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR CCA 90 bp CTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGGTGCCAGCTTCGCCGTAATCCTCTaGACCGAATTCCTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LKAVLRGHLREGRPEGASFAVIL*TEFLAK
Trigger: CTTTGCAAGGAATTCGGTCCAGAGGATTACGGCGAA...GCTGGCACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR CCA 90 bp GGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTTTCGCCGTAATCCTCTaGACCGAATTCCTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: GDRPGDLKAVLRGHLREGFAVIL*TEFLAK
Trigger: CTTTGCAAGGAATTCGGTCCAGAGGATTACGGCGAA...ACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR CCA 90 bp CACCAGACCACTGGACAAGAGAGGTCAGAGTCATACATAGCAATCTGGACAGGAGCCAGACCCCTGCCTTaGGGCTCCTGGTTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: HQTTGQERSESYIAIWTGARPLP*GSWFSP
Trigger: GGGACTGAACCAGGAGCCCCAAGGCAGGGGTCTGGC...TCCTGTCCAGATTGCTATGTATGACTCTGACCTCTCTTGTCCAGTGGTCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp TTAACATGGGGAAAGGCTAATTACCATGCCCAGTGCTGGGGTGGAGAAACAGAGAGGGTAAGGGCCACCTaGGCATCAGCCAGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: LTWGKANYHAQCWGGETERVRAT*ASARAH
Trigger: GTGGGCCCTGGCTGATGCCCAGGTGGCCCTTACCCT...CTCTGTTTCTCCACCCCAGCACTGGGCATGGTAATTAGCCTTTCCCCATGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp GACAGACCCATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACGGGCTGCGTCAGGCTaGGACCCACCTCTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: DRPIQGDPAGNGRLHPATRAASG*DPPLRV
Trigger: AACTCTGAGAGGTGGGTCCCAGCCTGACGCAGCCCG...TGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGATGGGTCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp GTGAATATTCTAGCAGTGAGAGGAGGTGAGCACCAGACCACTGGACAAGAGAGGGGGAGAGGGGCTGGTTaGGGTGGCTTCGGTGACATG +
Preference number: 4 (lower is better)
Translates to: VNILAVRGGEHQTTGQERGRGAG*GGFGDM
Trigger: CATGTCACCGAAGCCACCCCAACCAGCCCCTCTCCC...CCTCTCTTGTCCAGTGGTCTGGTGCTCACCTCCTCTCACTGCTAGAATATTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp AGTGGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGTAATCTGGGGGCTATaGCTAGAAAAACAGGGCACG +
Preference number: 4 (lower is better)
Translates to: SGDRPGDLKAVLRGHLREVIWGL*LEKQGT
Trigger: CGTGCCCTGTTTTTCTAGCCATAGCCCCCAGATTAC...TTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp CTGGTACCCAACTTTGCCAGTTCCTGGCTCTGTTGTAAGGCAGCTGCCAGCAGTTGCCCAGTGCTGGGGTaGAGAAACAGAGTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: LVPNFASSWLCCKAAASSCPVLG*RNRVAK
Trigger: CTTGGCCACTCTGTTTCTCCACCCCAGCACTGGGCA...ACTGCTGGCAGCTGCCTTACAACAGAGCCAGGAACTGGCAAAGTTGGGTACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424122.5
CDS-3UTR CCA 90 bp ATCCCACTCAAATCTCTCCTGTTTCCAGCCCCAGACCTATTACCTGTAGTCCCAGCCCCCACCTACCGGTaGTCCTGGGGGTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: IPLKSLLFPAPDLLPVVPAPTYR*SWGLSF
Trigger: GAAGCTCAACCCCCAGGACCACCGGTAGGTGGGGGC...TGGGACTACAGGTAATAGGTCTGGGGCTGGAAACAGGAGAGATTTGAGTGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
3UTR CAA 72 bp AAGGAACGATTTCCAAATAACCGGTGGTCCTGGGGGTaGAGCTTCAAGGCCTGGGTGAAGAGGACCACGGCC +
Preference number: 4 (lower is better)
Translates to: KERFPNNRWSWG*SFKAWVKRTTA
Trigger: GGCCGTGGTCCTCTTCACCCAGGCCTTGAAGCTCAACCCCCAGGACCACCGGTTATTTGGAAATCGTTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424122.5
CDS-3UTR TCA 90 bp GCAGCTGCCTCTCTGAAGCGCTTTGGTCCCAGAGGGATCAGAAAGAAAAGATTAGAGGCAGAGGGGCTTTaGGGGCAGGGCTCAGACTCT +
Preference number: 4 (lower is better)
Translates to: AAASLKRFGPRGIRKKRLEAEGL*GQGSDS
Trigger: AGAGTCTGAGCCCTGCCCTCAAAGCCCCTCTGCCTC...TAATCTTTTCTTTCTGATCCCTCTGGGACCAAAGCGCTTCAGAGAGGCAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR TCA 90 bp CCCATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATGAGGCAGAGGGGCTTTaGGGGCAGGGCTCAGACTCT +
Preference number: 4 (lower is better)
Translates to: PIQGDPAGNGRLHPATQYEAEGL*GQGSDS
Trigger: AGAGTCTGAGCCCTGCCCTCAAAGCCCCTCTGCCTC...ATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp AGAGGAGGTGAGCACCAGACCACTGGACAAGAGAGGTCAGAGTCATACATAGCACTGAAGCAGGCTGTCTaGGACACTGGGGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: RGGEHQTTGQERSESYIALKQAV*DTGEGG
Trigger: GCCACCTTCCCCAGTGTCTCAGACAGCCTGCTTCAG...TGCTATGTATGACTCTGACCTCTCTTGTCCAGTGGTCTGGTGCTCACCTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp AGTGGATGTGGGGCTCCTTTCTCTCATCAGAAGCTTCCCCATGGCAAGAGGAATCTGAAGCAGGCTGTCTaGGACACTGGGGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: SGCGAPFSHQKLPHGKRNLKQAV*DTGEGG
Trigger: GCCACCTTCCCCAGTGTCTCAGACAGCCTGCTTCAG...ATTCCTCTTGCCATGGGGAAGCTTCTGATGAGAGAAAGGAGCCCCACATCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp AGAGGAGGTGAGCACCAGACCACTGGACAAGAGAGGTCAGAGTCATACATAGCAGCTTCAAGGCCTGGGTaGAGAGGACCACGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: RGGEHQTTGQERSESYIAASRPG*RGPRPH
Trigger: ATGAGGCCGTGGTCCTCTTCACCCAGGCCTTGAAGC...TGCTATGTATGACTCTGACCTCTCTTGTCCAGTGGTCTGGTGCTCACCTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp ATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATGGAGGGCCCACGCTGGCTaGCCCAACCGCTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: ICSELSPHYVPHQGIYTWRAHAG*PNRSWQ
Trigger: CTGCCATGAGCGGTTGGGTCAGCCAGCGTGGGCCCT...CCATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR TCA 90 bp AGCCCCAGACCTATTACCTGTAGTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGGTGGCTTCGGTGACATaGAGGATAATGCAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: SPRPITCSPIKALPRRKRVASVT*RIMQEW
Trigger: CCACTCTTGCATTATCCTTCATGTCACCGAAGCCAC...CCTCTTCCGCCTGGGCAAGGCCTTGATGGGACTACAGGTAATAGGTCTGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410003.5
CDS-3UTR TCA 90 bp ACAGCAGCTGCCTCTCTGAAGCGCTTTGGTCCCAGAGGGATCAGAAAGAAAAGAGCCCCCTTACCAGTGTaGGGTGGAGAAGGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: TAAASLKRFGPRGIRKKRAPLPV*GGEGKS
Trigger: GCTCTTGCCTTCTCCACCTCACACTGGTAAGGGGGC...TCTTTTCTTTCTGATCCCTCTGGGACCAAAGCGCTTCAGAGAGGCAGCTGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR TCA 90 bp ATCCTTCCCCGCCCCCTCCTTAGCCACCTGAGGCTTGGTATTGCAGTCCCAGCCTCCTCATTTTGCAGGTaGAAAAGCAGACAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: ILPRPLLSHLRLGIAVPASSFCR*KSRQER
Trigger: CCTCTCTTGTCTGCTTTTTCACCTGCAAAATGAGGA...GGCTGGGACTGCAATACCAAGCCTCAGGTGGCTAAGGAGGGGGCGGGGAAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000449459.5
CDS-3UTR GCA 90 bp CTTCCCCATGGCAAGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGAGTCCCATCAAGGCCTTaGCCAGGCGGAAGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: LPHGKRNDCQGIINYGSRVPSRP*PGGRGP
Trigger: GGGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGAC...TCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCTTGCCATGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp GTATTGCAGTCCCAGCCAATTCTCCCTGATACCCGCCTCAGCATGACAGTGTGCAAGCAGGAGAGCCCATaGCTCTCATTCCACCCATCC +
Preference number: 4 (lower is better)
Translates to: VLQSQPILPDTRLSMTVCKQESP*LSFHPS
Trigger: GGATGGGTGGAATGAGAGGCATGGGCTCTCCTGCTT...GCACACTGTCATGCTGAGGCGGGTATCAGGGAGAATTGGCTGGGACTGCAATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR GCA 90 bp GGGGCTCCTTTCTCTCATCAGAAGCTTCCCCATGGCAAGAGGAATGACTGCCAGGATGCCTTTGGACTCTaGTGGGGCCTCTCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: GAPFSHQKLPHGKRNDCQDAFGL*WGLSSL
Trigger: AAGAGAGGAGAGGCCCCAGCAGAGTCCAAAGGCATC...CTGGCAGTCATTCCTCTTGCCATGGGGAAGCTTCTGATGAGAGAAAGGAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424122.5
CDS-3UTR GCA 90 bp AACTTTGCCAGTTCCTGGCTCTGTTGTAAGGCAGCTGCCAGCAGTCCCGGAGATGATGCCTTTGGACTCTaGTGGGGCCTCTCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: NFASSWLCCKAAASSPGDDAFGL*WGLSSL
Trigger: AAGAGAGGAGAGGCCCCAGCAGAGTCCAAAGGCATC...ATCTCCGGGACTGCTGGCAGCTGCCTTACAACAGAGCCAGGAACTGGCAAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
CDS-3UTR GCA 90 bp ACAGCAGCTGCCTCTCTGAAGCGCTTTGGTCCCAGAGGGATCAGAAAGAAAAGATCCCTTTGGCTCCCCTaGACCCTCCAGCCATGCTCT +
Preference number: 4 (lower is better)
Translates to: TAAASLKRFGPRGIRKKRSLWLP*TLQPCS
Trigger: AGAGCATGGCTGGAGGGTGCAGGGGAGCCAAAGGGA...TCTTTTCTTTCTGATCCCTCTGGGACCAAAGCGCTTCAGAGAGGCAGCTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449459.5
CDS-3UTR CCA 90 bp GTGAATATTCTAGCAGTGAGAGGAGGTGAGCACCAGACCACTGGACAAGAGAGGATCCGGTGCAGGCCCTaGGGATCACTCTCCACAAGC +
Preference number: 4 (lower is better)
Translates to: VNILAVRGGEHQTTGQERIRCRP*GSLSTS
Trigger: GCTTGTGGAGAGTGATCCCCAGGGCCTGCACCGGAT...CCTCTCTTGTCCAGTGGTCTGGTGCTCACCTCCTCTCACTGCTAGAATATTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000233623.11
ENST00000410003.5
CDS-3UTR CCA 90 bp AGAGGAGGTGAGCACCAGACCACTGGACAAGAGAGGTCAGAGTCATACATAGCAGGAGCTTCTGGGGCATaGCCACCTGAAGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: RGGEHQTTGQERSESYIAGASGA*PPEAGC
Trigger: ACAGCCTGCTTCAGGTGGCCATGCCCCAGAAGCTCC...TGCTATGTATGACTCTGACCTCTCTTGTCCAGTGGTCTGGTGCTCACCTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp GGGGCTCCTTTCTCTCATCAGAAGCTTCCCCATGGCAAGAGGAATGACTGCCAGACACTGTCCCTGAACTaGGTTTCCAGGGCTGGATGG +
Preference number: 4 (lower is better)
Translates to: GAPFSHQKLPHGKRNDCQTLSLN*VSRAGW
Trigger: CCATCCAGCCCTGGAAACCCAGTTCAGGGACAGTGT...CTGGCAGTCATTCCTCTTGCCATGGGGAAGCTTCTGATGAGAGAAAGGAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp GGGGCTCCTTTCTCTCATCAGAAGCTTCCCCATGGCAAGAGGAATGACTGCCAGCATCAAGCTGAAAGGTaGGACTCAAGCCCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GAPFSHQKLPHGKRNDCQHQAER*DSSPLS
Trigger: GCTGAGGGGGCTTGAGTCCCACCTTTCAGCTTGATG...CTGGCAGTCATTCCTCTTGCCATGGGGAAGCTTCTGATGAGAGAAAGGAGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp AACTTTGCCAGTTCCTGGCTCTGTTGTAAGGCAGCTGCCAGCAGTCCCGGAGATCATCAAGCTGAAAGGTaGGACTCAAGCCCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: NFASSWLCCKAAASSPGDHQAER*DSSPLS
Trigger: GCTGAGGGGGCTTGAGTCCCACCTTTCAGCTTGATG...ATCTCCGGGACTGCTGGCAGCTGCCTTACAACAGAGCCAGGAACTGGCAAAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424122.5
CDS-3UTR CCA 90 bp CCTTTCTCTCATCAGAAGCTTCCCCATGGCAAGAGGAATGACTGCCAGGGCATCTGCCCAGTGCTGGGGTaGAGAAACAGAGTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: PFSHQKLPHGKRNDCQGICPVLG*RNRVAK
Trigger: CTTGGCCACTCTGTTTCTCCACCCCAGCACTGGGCA...GATGCCCTGGCAGTCATTCCTCTTGCCATGGGGAAGCTTCTGATGAGAGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp AACTTTGCCAGTTCCTGGCTCTGTTGTAAGGCAGCTGCCAGCAGTCCCGGAGATTACCATGCCCAGTGCTaGGGTGGAGAAACAGAGTGG +
Preference number: 4 (lower is better)
Translates to: NFASSWLCCKAAASSPGDYHAQC*GGETEW
Trigger: CCACTCTGTTTCTCCACCCCAGCACTGGGCATGGTA...ATCTCCGGGACTGCTGGCAGCTGCCTTACAACAGAGCCAGGAACTGGCAAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424122.5
CDS-3UTR TCA 90 bp CTAAAGCCTTCTGCAGACCCACATTTAAATGAGCTGACAGTCCCAGCAGGACTAGAGGCAGAGGGGCTTTaGGGGCAGGGCTCAGACTCT +
Preference number: 4 (lower is better)
Translates to: LKPSADPHLNELTVPAGLEAEGL*GQGSDS
Trigger: AGAGTCTGAGCCCTGCCCTCAAAGCCCCTCTGCCTC...TAGTCCTGCTGGGACTGTCAGCTCATTTAAATGTGGGTCTGCAGAAGGCTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp GTGAATATTCTAGCAGTGAGAGGAGGTGAGCACCAGACCACTGGACAAGAGAGGGCTCTCATCTCCATCTaGGGTAGTGCTGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: VNILAVRGGEHQTTGQERALISI*GSAGLG
Trigger: CCCAAGGCCAGCACTACCTCAGATGGAGATGAGAGC...CCTCTCTTGTCCAGTGGTCTGGTGCTCACCTCCTCTCACTGCTAGAATATTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp GGACTTCCCAAATGCAAACCCTTGGTGAATATTCTAGCAGTGAGAGGAGGTGAGTGGGGCCTTCTACTCTaGGTCTGGGAGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GLPKCKPLVNILAVRGGEWGLLL*VWERGW
Trigger: CCAGCCCCTCTCCCAGACTCAGAGTAGAAGGCCCCA...CTCACCTCCTCTCACTGCTAGAATATTCACCAAGGGTTTGCATTTGGGAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp CACCAGACCACTGGACAAGAGAGGTCAGAGTCATACATAGCAATCTGGACAGGAGATGTCCCAGCCCTTTaGAGGGTCCTGGGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: HQTTGQERSESYIAIWTGDVPAL*RVLGLE
Trigger: CTCAAGCCCCAGGACCCTTCAAAGGGCTGGGACATC...TCCTGTCCAGATTGCTATGTATGACTCTGACCTCTCTTGTCCAGTGGTCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp CTTCCCCATGGCAAGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGAGCCCCCTCAGCACTGTaGCCCCGTTCCTGTACACCA +
Preference number: 4 (lower is better)
Translates to: LPHGKRNDCQGIINYGSRAPSAL*PRSCTP
Trigger: TGGTGTACAGGAACGGGGTCACAGTGCTGAGGGGGC...TCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCTTGCCATGGGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp TCTCTCCTGTTTCCAGCCCCAGACCTATTACCTGTAGTCCCATCAAGGCCTTGCGAGCATCCATCAAGCTaGAAGGTGGGACTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: SLLFPAPDLLPVVPSRPCEHPSS*KVGLKP
Trigger: GGGCTTGAGTCCCACCTTTCAGCTTGATGGATGCTC...GCAAGGCCTTGATGGGACTACAGGTAATAGGTCTGGGGCTGGAAACAGGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410003.5
CDS-3UTR TCA 90 bp GTGAATATTCTAGCAGTGAGAGGAGGTGAGCACCAGACCACTGGACAAGAGAGGAGCAGTGAGAGGAGGTaGGCACCAGACCACTGGACA +
Preference number: 4 (lower is better)
Translates to: VNILAVRGGEHQTTGQERSSERR*APDHWT
Trigger: TGTCCAGTGGTCTGGTGCTCACCTCCTCTCACTGCT...CCTCTCTTGTCCAGTGGTCTGGTGCTCACCTCCTCTCACTGCTAGAATATTCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp GCTGAGGCCCCATTCAGCGGGAGAGCCACCAGTTGGGAGTGTGGACATGTATGGGTACCACAACCATTGTaGCACTTTGGTACTAGAAGC +
Preference number: 4 (lower is better)
Translates to: AEAPFSGRATSWECGHVWVPQPL*HFGTRS
Trigger: GCTTCTAGTACCAAAGTGTCACAATGGTTGTGGTAC...CCATACATGTCCACACTCCCAACTGGTGGCTCTCCCGCTGAATGGGGCCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410003.5
CDS-3UTR GCA 90 bp ACTTTGCCAGTTCCTGGCTCTGTTGTAAGGCAGCTGCCAGCAGTCCCGGAGATGCTGGACCGAATTCCTTaGAAAGTTTGGGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TLPVPGSVVRQLPAVPEMLDRIP*KVWVQQ
Trigger: CTGCTGCACCCAAACTTTGCAAGGAATTCGGTCCAG...CATCTCCGGGACTGCTGGCAGCTGCCTTACAACAGAGCCAGGAACTGGCAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
CDS-3UTR GCA 90 bp AAGGGACTTCCCAAATGCAAACCCTTGGTGAATATTCTAGCAGTGAGAGGAGGTGCTGCAGCCGCCCGCTaGTCCCATCCACATGGATCC +
Preference number: 4 (lower is better)
Translates to: KGLPKCKPLVNILAVRGGAAAAR*SHPHGS
Trigger: GGATCCATGTGGATGGGAGCAGCGGGCGGCTGCAGC...ACCTCCTCTCACTGCTAGAATATTCACCAAGGGTTTGCATTTGGGAAGTCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000233623.11
ENST00000410003.5
CDS-3UTR GCA 90 bp CTTCCCCATGGCAAGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGAGGAGACCACAGTAGGTaGCCAGTCCCTCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: LPHGKRNDCQGIINYGSRGDHSR*PVPQPP
Trigger: AGGGGGCTGAGGGACTGGGCACCTACTGTGGTCTCC...TCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCTTGCCATGGGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp GGACTTCCCAAATGCAAACCCTTGGTGAATATTCTAGCAGTGAGAGGAGGTGAGCCTATGAGGGACCGGTaGCCCCTCATCTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GLPKCKPLVNILAVRGGEPMRDR*PLIWPE
Trigger: CTCAGGCCAGATGAGGGGGCACCGGTCCCTCATAGG...CTCACCTCCTCTCACTGCTAGAATATTCACCAAGGGTTTGCATTTGGGAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp CAAGAGAGGTCAGAGTCATACATAGCAATCTGGACAGGAAATGGCATGAGGAGCGAGTCCTCAACACTCTaGCCTGCCCTGGCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: QERSESYIAIWTGNGMRSESSTL*PALAKP
Trigger: GGGCTTGGCCAGGGCAGGGCAGAGTGTTGAGGACTC...GCTCCTCATGCCATTTCCTGTCCAGATTGCTATGTATGACTCTGACCTCTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410003.5
CDS-3UTR CCA 90 bp GCAGCTGCCTCTCTGAAGCGCTTTGGTCCCAGAGGGATCAGAAAGAAAAGATTACCGCCCCACAGTCTTTaGAATCGGCGCCATCGCATC +
Preference number: 4 (lower is better)
Translates to: AAASLKRFGPRGIRKKRLPPHSL*NRRHRI
Trigger: GATGCGATGGCGCCGATTCCAAAGACTGTGGGGCGG...TAATCTTTTCTTTCTGATCCCTCTGGGACCAAAGCGCTTCAGAGAGGCAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR CCA 90 bp CCCATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATCCGCCCCACAGTCTTTaGAATCGGCGCCATCGCATC +
Preference number: 4 (lower is better)
Translates to: PIQGDPAGNGRLHPATQYPPHSL*NRRHRI
Trigger: GATGCGATGGCGCCGATTCCAAAGACTGTGGGGCGG...ATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp CACCAGACCACTGGACAAGAGAGGTCAGAGTCATACATAGCAATCTGGACAGGAATCCGGTGCAGGCCCTaGGGATCACTCTCCACAAGC +
Preference number: 4 (lower is better)
Translates to: HQTTGQERSESYIAIWTGIRCRP*GSLSTS
Trigger: GCTTGTGGAGAGTGATCCCCAGGGCCTGCACCGGAT...TCCTGTCCAGATTGCTATGTATGACTCTGACCTCTCTTGTCCAGTGGTCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000233623.11
ENST00000410003.5
CDS-3UTR CCA 90 bp TCTCTCCTGTTTCCAGCCCCAGACCTATTACCTGTAGTCCCATCAAGGCCTTGCCCTCAGCCAGGCGATTaGCTTCCTCTTCTGTCACCA +
Preference number: 4 (lower is better)
Translates to: SLLFPAPDLLPVVPSRPCPQPGD*LPLLSP
Trigger: TGGTGACAGAAGAGGAAGCCAATCGCCTGGCTGAGG...GCAAGGCCTTGATGGGACTACAGGTAATAGGTCTGGGGCTGGAAACAGGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR CCA 90 bp ATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATGGAGCCAGGGCCCACGCTaGCTGACCCAACCGCTCATG +
Preference number: 4 (lower is better)
Translates to: ICSELSPHYVPHQGIYTWSQGPR*LTQPLM
Trigger: CATGAGCGGTTGGGTCAGCCAGCGTGGGCCCTGGCT...CCATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR CCA 90 bp GGACTTCCCAAATGCAAACCCTTGGTGAATATTCTAGCAGTGAGAGGAGGTGAGCGGGCTGCGTCAGGCTaGGACCCACCTCTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: GLPKCKPLVNILAVRGGERAASG*DPPLRV
Trigger: AACTCTGAGAGGTGGGTCCCAGCCTGACGCAGCCCG...CTCACCTCCTCTCACTGCTAGAATATTCACCAAGGGTTTGCATTTGGGAAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp TGGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTCATACATAGCAATCTaGACAGGAAATGGCATGAGG +
Preference number: 4 (lower is better)
Translates to: WRQARGPQSSASRAPEGRSYIAI*TGNGMR
Trigger: CCTCATGCCATTTCCTGTCCAGATTGCTATGTATGA...CCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp CCTTTCTCTCATCAGAAGCTTCCCCATGGCAAGAGGAATGACTGCCAGGGCATCTACCATGCCCAGTGCTaGGGTGGAGAAACAGAGTGG +
Preference number: 4 (lower is better)
Translates to: PFSHQKLPHGKRNDCQGIYHAQC*GGETEW
Trigger: CCACTCTGTTTCTCCACCCCAGCACTGGGCATGGTA...GATGCCCTGGCAGTCATTCCTCTTGCCATGGGGAAGCTTCTGATGAGAGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp AGTGGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAATTTGACGCTTCTTCTTaGGTCGCTTTTTCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: SGDRPGDLKAVLRGHLREFDASS*VAFSLL
Trigger: AAGCAGAGAAAAAGCGACTCAAGAAGAAGCGTCAAA...TTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
CDS-3UTR TCA 90 bp CACCAGACCACTGGACAAGAGAGGTCAGAGTCATACATAGCAATCTGGACAGGATCACCACACTGTCCCTaGACTGGGTTTCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: HQTTGQERSESYIAIWTGSPHCP*TGFPGL
Trigger: CAGCCCTGGAAACCCAGTTCAGGGACAGTGTGGTGA...TCCTGTCCAGATTGCTATGTATGACTCTGACCTCTCTTGTCCAGTGGTCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp ATGGTAGAAACCATTTTGAGCAAAGCTGGTACCCAACTTTGCCAGTTCCTGGCTTCTCTCTGCGGGCACTaGGGGGCCAATCCCCAACCT +
Preference number: 4 (lower is better)
Translates to: MVETILSKAGTQLCQFLASLCGH*GANPQP
Trigger: AGGTTGGGGATTGGCCCCTCAGTGCCCGCAGAGAGA...AGCCAGGAACTGGCAAAGTTGGGTACCAGCTTTGCTCAAAATGGTTTCTACCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
CDS-3UTR TCA 90 bp AAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACAAGGGCCCACGCTGGCTaGCCCAACCGCTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: KICSELSPHYVPHQGIYTRAHAG*PNRSWQ
Trigger: CTGCCATGAGCGGTTGGGTCAGCCAGCGTGGGCCCT...TGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR TCA 90 bp CCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATTTAAGGGGCCTAAACCTGGAGGGCCCCAGGTaGCAGAGGTGGTGCACAGAT +
Preference number: 4 (lower is better)
Translates to: PAGNGRLHPATQYLRGLNLEGPR*QRWCTD
Trigger: ATCTGTGCACCACCTCTGTCACCTGGGGCCCTCCAG...GTTTAGGCCCCTTAAATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp CTAAAGCCTTCTGCAGACCCACATTTAAATGAGCTGACAGTCCCAGCAGGACTAGATGTCCCAGCCCTTTaGAGGGTCCTGGGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: LKPSADPHLNELTVPAGLDVPAL*RVLGLE
Trigger: CTCAAGCCCCAGGACCCTTCAAAGGGCTGGGACATC...TAGTCCTGCTGGGACTGTCAGCTCATTTAAATGTGGGTCTGCAGAAGGCTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp ATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATGGCCCCCTCATCTGGCCTaGGACAGATGCTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: ICSELSPHYVPHQGIYTWPPHLA*DRCWSP
Trigger: TGGGCTCCAGCATCTGTCTCAGGCCAGATGAGGGGG...CCATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR TCA 90 bp AGTGGATGTGGGGCTCCTTTCTCTCATCAGAAGCTTCCCCATGGCAAGAGGAATTGGCATGAGGAGCTGTaGGTAATCTGGGGGCTATGG +
Preference number: 4 (lower is better)
Translates to: SGCGAPFSHQKLPHGKRNWHEEL*VIWGLW
Trigger: CCATAGCCCCCAGATTACTCACAGCTCCTCATGCCA...ATTCCTCTTGCCATGGGGAAGCTTCTGATGAGAGAAAGGAGCCCCACATCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp AACTTTGCCAGTTCCTGGCTCTGTTGTAAGGCAGCTGCCAGCAGTCCCGGAGATAGACCCACATTTAAATaGGCTGACAGTCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: NFASSWLCCKAAASSPGDRPTFK*ADSPSR
Trigger: CCTGCTGGGACTGTCAGCTCATTTAAATGTGGGTCT...ATCTCCGGGACTGCTGGCAGCTGCCTTACAACAGAGCCAGGAACTGGCAAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424122.5
CDS-3UTR TCA 90 bp ACTGCTCCAAACGCTCCTGTCGCTTCCGTTCCTTTTGACGCTGCAATAGTAATGCCAGCCAATTCTCCCTaGTACCCGCCTCAGCATGAC +
Preference number: 4 (lower is better)
Translates to: TAPNAPVASVPFDAAIVMPANSP*YPPQHD
Trigger: GTCATGCTGAGGCGGGTATCAGGGAGAATTGGCTGG...CATTACTATTGCAGCGTCAAAAGGAACGGAAGCGACAGGAGCGTTTGGAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449459.5
CDS-3UTR GCA 90 bp GGACTTCCCAAATGCAAACCCTTGGTGAATATTCTAGCAGTGAGAGGAGGTGAGGGCTCCCCACAGTACTaGTCCAAACGCTCCTGTCGC +
Preference number: 4 (lower is better)
Translates to: GLPKCKPLVNILAVRGGEGSPQY*SKRSCR
Trigger: GCGACAGGAGCGTTTGGAGCAGTACTGTGGGGAGCC...CTCACCTCCTCTCACTGCTAGAATATTCACCAAGGGTTTGCATTTGGGAAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp AAGGGACTTCCCAAATGCAAACCCTTGGTGAATATTCTAGCAGTGAGAGGAGGTCCTATGAGGGACCGGTaGCCCCTCATCTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: KGLPKCKPLVNILAVRGGPMRDR*PLIWPE
Trigger: CTCAGGCCAGATGAGGGGGCACCGGTCCCTCATAGG...ACCTCCTCTCACTGCTAGAATATTCACCAAGGGTTTGCATTTGGGAAGTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp CACCAAGGGATATATACATGGCCCTGCCCTATGAGGGACCGGTGCCCCCTCATCGGCAAGAGGAATGACTaGCAGGGCATCATTAACTAT +
Preference number: 4 (lower is better)
Translates to: HQGIYTWPCPMRDRCPLIGKRND*QGIINY
Trigger: ATAGTTAATGATGCCCTGGCAGTCATTCCTCTTGCC...GATGAGGGGGCACCGGTCCCTCATAGGGCAGGGCCATGTATATATCCCTTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp TGGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGAAGGGACTTCCCAAATaGAAACCCTTGGTGAATATT +
Preference number: 4 (lower is better)
Translates to: WRQARGPQSSASRAPEGRKGLPK*KPLVNI
Trigger: AATATTCACCAAGGGTTTGCATTTGGGAAGTCCCTT...CCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp TGGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGATTAAAAGGAGATCATaGTTCTTACCCAGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: WRQARGPQSSASRAPEGRIKRRS*FLPRKW
Trigger: CCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAAT...CCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp ATCCCACTCAAATCTCTCCTGTTTCCAGCCCCAGACCTATTACCTGTAGTCCCACTCAGCATGACAGTGTaGCTGGCCCCCTTACCAGTG +
Preference number: 4 (lower is better)
Translates to: IPLKSLLFPAPDLLPVVPLSMTV*LAPLPV
Trigger: CACTGGTAAGGGGGCCAGGCACACTGTCATGCTGAG...TGGGACTACAGGTAATAGGTCTGGGGCTGGAAACAGGAGAGATTTGAGTGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR CCA 90 bp CTTCCCCATGGCAAGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGAGGAGCTTCTGGGGCATaGCCACCTGAAGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LPHGKRNDCQGIINYGSRGASGA*PPEAGC
Trigger: ACAGCCTGCTTCAGGTGGCCATGCCCCAGAAGCTCC...TCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCTTGCCATGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp GACAGACCCATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACCTCAGCCAGGCGATTaGCTTCCTCTTCTGTCACCA +
Preference number: 4 (lower is better)
Translates to: DRPIQGDPAGNGRLHPATPQPGD*LPLLSP
Trigger: TGGTGACAGAAGAGGAAGCCAATCGCCTGGCTGAGG...TGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGATGGGTCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp CCCATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATCTGCCTTGGGGCTCCTaGTTCAGTCCCTTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: PIQGDPAGNGRLHPATQYLPWGS*FSPFSL
Trigger: CAGAGAGAAGGGACTGAACCAGGAGCCCCAAGGCAG...ATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp ATCCCACTCAAATCTCTCCTGTTTCCAGCCCCAGACCTATTACCTGTAGTCCCACTGCCTTGGGGCTCCTaGTTCAGTCCCTTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: IPLKSLLFPAPDLLPVVPLPWGS*FSPFSL
Trigger: CAGAGAGAAGGGACTGAACCAGGAGCCCCAAGGCAG...TGGGACTACAGGTAATAGGTCTGGGGCTGGAAACAGGAGAGATTTGAGTGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR CCA 90 bp AATATCCCTTATGAGGTAGGGACTACCCTCATTTTTACAGGTGAGGGAACTGAGGCCAGACCCCTGCCTTaGGGCTCCTGGTTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: NIPYEVGTTLIFTGEGTEARPLP*GSWFSP
Trigger: GGGACTGAACCAGGAGCCCCAAGGCAGGGGTCTGGC...CTCAGTTCCCTCACCTGTAAAAATGAGGGTAGTCCCTACCTCATAAGGGATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp AGAGGAGGTGAGCACCAGACCACTGGACAAGAGAGGTCAGAGTCATACATAGCAAGATGCCTGTACCTTTaGACTCTGCTGGGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: RGGEHQTTGQERSESYIARCLYL*TLLGPL
Trigger: GAGAGGCCCCAGCAGAGTCCAAAGGTACAGGCATCT...TGCTATGTATGACTCTGACCTCTCTTGTCCAGTGGTCTGGTGCTCACCTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233623.11
ENST00000410003.5
CDS-3UTR CCA 90 bp ACCCACAGGGCAGCAATAATCATTTATCCTGATGAAAGGTTCCTCTGTGAAAGGAGCCAGGGCCCACGCTaGCTGACCCAACCGCTCATG +
Preference number: 4 (lower is better)
Translates to: THRAAIIIYPDERFLCERSQGPR*LTQPLM
Trigger: CATGAGCGGTTGGGTCAGCCAGCGTGGGCCCTGGCT...CCTTTCACAGAGGAACCTTTCATCAGGATAAATGATTATTGCTGCCCTGTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp CCAGGTATGAACAGTATTGAGCAAGACCCACAGGGCAGCAATAATCATTTATCCAGCCAGGGCCCACGCTaGCTGACCCAACCGCTCATG +
Preference number: 4 (lower is better)
Translates to: PGMNSIEQDPQGSNNHLSSQGPR*LTQPLM
Trigger: CATGAGCGGTTGGGTCAGCCAGCGTGGGCCCTGGCT...GGATAAATGATTATTGCTGCCCTGTGGGTCTTGCTCAATACTGTTCATACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp ATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATGGCGGGCTGCGTCAGGCTaGGACCCACCTCTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: ICSELSPHYVPHQGIYTWRAASG*DPPLRV
Trigger: AACTCTGAGAGGTGGGTCCCAGCCTGACGCAGCCCG...CCATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR CCA 90 bp AGGAACCAGCTAGGGGAAGCTGCCAGGATCTTAGACGTGAAATTAAAAGGAGATGGGAGAGGGGCTGGTTaGGGTGGCTTCGGTGACATG +
Preference number: 4 (lower is better)
Translates to: RNQLGEAARILDVKLKGDGRGAG*GGFGDM
Trigger: CATGTCACCGAAGCCACCCCAACCAGCCCCTCTCCC...ATCTCCTTTTAATTTCACGTCTAAGATCCTGGCAGCTTCCCCTAGCTGGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp CTAAAGCCTTCTGCAGACCCACATTTAAATGAGCTGACAGTCCCAGCAGGACTACGGTGCCCCCTCATCTaGCCTGAGACAGATGCTGGA +
Preference number: 4 (lower is better)
Translates to: LKPSADPHLNELTVPAGLRCPLI*PETDAG
Trigger: TCCAGCATCTGTCTCAGGCCAGATGAGGGGGCACCG...TAGTCCTGCTGGGACTGTCAGCTCATTTAAATGTGGGTCTGCAGAAGGCTTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp AACTTTGCCAGTTCCTGGCTCTGTTGTAAGGCAGCTGCCAGCAGTCCCGGAGATCAAGGGATATATACATaGCCCTGCCCTATGAGGGAC +
Preference number: 4 (lower is better)
Translates to: NFASSWLCCKAAASSPGDQGIYT*PCPMRD
Trigger: GTCCCTCATAGGGCAGGGCCATGTATATATCCCTTG...ATCTCCGGGACTGCTGGCAGCTGCCTTACAACAGAGCCAGGAACTGGCAAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424122.5
CDS-3UTR CCA 90 bp TTCCTGAAACACAGCAGCTGCCTCTCTGAAGCGCTTTGGTCCCAGAGGGATCAGGTGAATGAGGTCCCCTaGACCAAGAGGAAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: FLKHSSCLSEALWSQRDQVNEVP*TKRKRK
Trigger: CTTTCTCTTCCTCTTGGTCCAGGGGACCTCATTCAC...CTGATCCCTCTGGGACCAAAGCGCTTCAGAGAGGCAGCTGCTGTGTTTCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410003.5
CDS-3UTR CCA 90 bp ACCCACAGGGCAGCAATAATCATTTATCCTGATGAAAGGTTCCTCTGTGAAAGGGCCCCCACCTACCGGTaGTCCTGGGGGTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: THRAAIIIYPDERFLCERAPTYR*SWGLSF
Trigger: GAAGCTCAACCCCCAGGACCACCGGTAGGTGGGGGC...CCTTTCACAGAGGAACCTTTCATCAGGATAAATGATTATTGCTGCCCTGTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000410003.5
CDS-3UTR TCA 90 bp TTAACATGGGGAAAGGCTAATTACCATGCCCAGTGCTGGGGTGGAGAAACAGAGGAGAGCAGTCTAGCTTaGTCCGCCCCACAGTCTTTG +
Preference number: 4 (lower is better)
Translates to: LTWGKANYHAQCWGGETEESSLA*SAPQSL
Trigger: CAAAGACTGTGGGGCGGATCAAGCTAGACTGCTCTC...CTCTGTTTCTCCACCCCAGCACTGGGCATGGTAATTAGCCTTTCCCCATGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp CACCAAGGGATATATACATGGCCCTGCCCTATGAGGGACCGGTGCCCCCTCATCTTTGACGCTTCTTCTTaGGTCGCTTTTTCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: HQGIYTWPCPMRDRCPLIFDASS*VAFSLL
Trigger: AAGCAGAGAAAAAGCGACTCAAGAAGAAGCGTCAAA...GATGAGGGGGCACCGGTCCCTCATAGGGCAGGGCCATGTATATATCCCTTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp CTAAAGCCTTCTGCAGACCCACATTTAAATGAGCTGACAGTCCCAGCAGGACTAGCTCTCATCTCCATCTaGGGTAGTGCTGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: LKPSADPHLNELTVPAGLALISI*GSAGLG
Trigger: CCCAAGGCCAGCACTACCTCAGATGGAGATGAGAGC...TAGTCCTGCTGGGACTGTCAGCTCATTTAAATGTGGGTCTGCAGAAGGCTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp GCAAGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGAGAATAAGGTCTCTCTCTGCGGGCACTaGGGGGCCAATCCCCAACCT +
Preference number: 4 (lower is better)
Translates to: ARGMTARASLTMDLENKVSLCGH*GANPQP
Trigger: AGGTTGGGGATTGGCCCCTCAGTGCCCGCAGAGAGA...GACCTTATTCTCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp ACCCACAGGGCAGCAATAATCATTTATCCTGATGAAAGGTTCCTCTGTGAAAGGCTGGAGGGCCCCAGGTaGCAGAGGTGGTGCACAGAT +
Preference number: 4 (lower is better)
Translates to: THRAAIIIYPDERFLCERLEGPR*QRWCTD
Trigger: ATCTGTGCACCACCTCTGTCACCTGGGGCCCTCCAG...CCTTTCACAGAGGAACCTTTCATCAGGATAAATGATTATTGCTGCCCTGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp AATATCCCTTATGAGGTAGGGACTACCCTCATTTTTACAGGTGAGGGAACTGAGTGCTTCGAGGGCACCTaGGGGAAGGTAGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: NIPYEVGTTLIFTGEGTECFEGT*GKVGLR
Trigger: CCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCA...CTCAGTTCCCTCACCTGTAAAAATGAGGGTAGTCCCTACCTCATAAGGGATATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp CCAGGTATGAACAGTATTGAGCAAGACCCACAGGGCAGCAATAATCATTTATCCTGGGGCCTTCTACTCTaGGTCTGGGAGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PGMNSIEQDPQGSNNHLSWGLLL*VWERGW
Trigger: CCAGCCCCTCTCCCAGACTCAGAGTAGAAGGCCCCA...GGATAAATGATTATTGCTGCCCTGTGGGTCTTGCTCAATACTGTTCATACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp AAGGGACTTCCCAAATGCAAACCCTTGGTGAATATTCTAGCAGTGAGAGGAGGTGATGTCCCAGCCCTTTaGAGGGTCCTGGGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: KGLPKCKPLVNILAVRGGDVPAL*RVLGLE
Trigger: CTCAAGCCCCAGGACCCTTCAAAGGGCTGGGACATC...ACCTCCTCTCACTGCTAGAATATTCACCAAGGGTTTGCATTTGGGAAGTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp ATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATTTACCCCCTCATCTGGCCTaGGACAGATGCTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: IQGDPAGNGRLHPATQYLPPHLA*DRCWSP
Trigger: TGGGCTCCAGCATCTGTCTCAGGCCAGATGAGGGGG...TAAATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp CCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATTTAAGGGGCCTAAACGGCACGAGCTGGGGCTaGGAAGAGGTGAGCATCCAT +
Preference number: 4 (lower is better)
Translates to: PAGNGRLHPATQYLRGLNGTSWG*EEVSIH
Trigger: ATGGATGCTCACCTCTTCTCAGCCCCAGCTCGTGCC...GTTTAGGCCCCTTAAATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp GACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGGTGCCATCTTTGCAGCTCTATaGGACAGGCATCATTATTAT +
Preference number: 4 (lower is better)
Translates to: DLKAVLRGHLREGRPEGAIFAAL*DRHHYY
Trigger: ATAATAATGATGCCTGTCTCATAGAGCTGCAAAGAT...GGCACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449459.5
CDS-3UTR GCA 90 bp CTAGGGGAAGCTGCCAGGATCTTAGACGTGAAATTAAAAGGAGATCATGCTTCTGGAGACCACAGTAGGTaGCCAGTCCCTCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: LGEAARILDVKLKGDHASGDHSR*PVPQPP
Trigger: AGGGGGCTGAGGGACTGGGCACCTACTGTGGTCTCC...AGAAGCATGATCTCCTTTTAATTTCACGTCTAAGATCCTGGCAGCTTCCCCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp ACAGCAGCTGCCTCTCTGAAGCGCTTTGGTCCCAGAGGGATCAGAAAGAAAAGAGATACAGGAAGGACTTaGGGAGACCACAGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: TAAASLKRFGPRGIRKKRDTGRT*GDHSRC
Trigger: GCACCTACTGTGGTCTCCGCAAGTCCTTCCTGTATC...TCTTTTCTTTCTGATCCCTCTGGGACCAAAGCGCTTCAGAGAGGCAGCTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR GCA 90 bp GACAGACCCATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACATGTACCTTTGGACTCTaGTGGGGCCTCTCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: DRPIQGDPAGNGRLHPATCTFGL*WGLSSL
Trigger: AAGAGAGGAGAGGCCCCAGCAGAGTCCAAAGGTACA...TGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGATGGGTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233623.11
ENST00000410003.5
CDS-3UTR GCA 90 bp ACAGCAGCTGCCTCTCTGAAGCGCTTTGGTCCCAGAGGGATCAGAAAGAAAAGAGCTGGTACCCAACTTTaGCAGTTCCTGGCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: TAAASLKRFGPRGIRKKRAGTQL*QFLALL
Trigger: CAACAGAGCCAGGAACTGGCAAAGTTGGGTACCAGC...TCTTTTCTTTCTGATCCCTCTGGGACCAAAGCGCTTCAGAGAGGCAGCTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR GCA 90 bp AGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGAGAATAAGGTCTCAGTCCCATCAAGGCCTTaGCCAGGCGGAAGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: RGMTARASLTMDLENKVSVPSRP*PGGRGP
Trigger: GGGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGAC...TGAGACCTTATTCTCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp AAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATGTCCCATCAAGGCCTTaGCCAGGCGGAAGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: KYAVNCHHTMSPTKGYIHVPSRP*PGGRGP
Trigger: GGGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGAC...ATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR CCA 90 bp ATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATGGCCTCCAGTGGGCAGCTaGGCCGTAGAGAGCAGTCTA +
Preference number: 4 (lower is better)
Translates to: ICSELSPHYVPHQGIYTWPPVGS*AVESSL
Trigger: TAGACTGCTCTCTACGGCCCAGCTGCCCACTGGAGG...CCATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp ATGGTAGAAACCATTTTGAGCAAAGCTGGTACCCAACTTTGCCAGTTCCTGGCTGGAGCTTCTGGGGCATaGCCACCTGAAGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: MVETILSKAGTQLCQFLAGASGA*PPEAGC
Trigger: ACAGCCTGCTTCAGGTGGCCATGCCCCAGAAGCTCC...AGCCAGGAACTGGCAAAGTTGGGTACCAGCTTTGCTCAAAATGGTTTCTACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
CDS-3UTR CCA 90 bp TTAACATGGGGAAAGGCTAATTACCATGCCCAGTGCTGGGGTGGAGAAACAGAGCCTCAGCCAGGCGATTaGCTTCCTCTTCTGTCACCA +
Preference number: 4 (lower is better)
Translates to: LTWGKANYHAQCWGGETEPQPGD*LPLLSP
Trigger: TGGTGACAGAAGAGGAAGCCAATCGCCTGGCTGAGG...CTCTGTTTCTCCACCCCAGCACTGGGCATGGTAATTAGCCTTTCCCCATGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp CTTCCCCATGGCAAGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGAGTTTCCAGGGCTGGATaGGGGGCTCTCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: LPHGKRNDCQGIINYGSRVSRAG*GALISI
Trigger: GATGGAGATGAGAGCCCCCCATCCAGCCCTGGAAAC...TCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCTTGCCATGGGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp CAAGAGAGGTCAGAGTCATACATAGCAATCTGGACAGGAAATGGCATGAGGAGCTTGAGCTTCAAGGCCTaGGTGAAGAGGACCACGGCC +
Preference number: 4 (lower is better)
Translates to: QERSESYIAIWTGNGMRSLSFKA*VKRTTA
Trigger: GGCCGTGGTCCTCTTCACCCAGGCCTTGAAGCTCAA...GCTCCTCATGCCATTTCCTGTCCAGATTGCTATGTATGACTCTGACCTCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp TCAAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATAAGGGTAAGGGCCACCTaGGCATCAGCCAGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: SKYAVNCHHTMSPTKGYIRVRAT*ASARAH
Trigger: GTGGGCCCTGGCTGATGCCCAGGTGGCCCTTACCCT...TATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR CCA 90 bp AAGGGACTTCCCAAATGCAAACCCTTGGTGAATATTCTAGCAGTGAGAGGAGGTCCCTTTGAAGGGTCCTaGGGCTTGAGAGGATGGGGC +
Preference number: 4 (lower is better)
Translates to: KGLPKCKPLVNILAVRGGPFEGS*GLRGWG
Trigger: GCCCCATCCTCTCAAGCCCCAGGACCCTTCAAAGGG...ACCTCCTCTCACTGCTAGAATATTCACCAAGGGTTTGCATTTGGGAAGTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp ATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATGGCCCTTTGAAGGGTCCTaGGGCTTGAGAGGATGGGGC +
Preference number: 4 (lower is better)
Translates to: ICSELSPHYVPHQGIYTWPFEGS*GLRGWG
Trigger: GCCCCATCCTCTCAAGCCCCAGGACCCTTCAAAGGG...CCATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR CCA 90 bp ATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATGGCGGTGCCCCCTCATCTaGCCTGAGACAGATGCTGGA +
Preference number: 4 (lower is better)
Translates to: ICSELSPHYVPHQGIYTWRCPLI*PETDAG
Trigger: TCCAGCATCTGTCTCAGGCCAGATGAGGGGGCACCG...CCATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR CCA 90 bp GGACTTCCCAAATGCAAACCCTTGGTGAATATTCTAGCAGTGAGAGGAGGTGAGAAGGTTGTAGCAGCTTaGGCACCTGCTGAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GLPKCKPLVNILAVRGGEKVVAA*APAEAP
Trigger: TGGGGCCTCAGCAGGTGCCCAAGCTGCTACAACCTT...CTCACCTCCTCTCACTGCTAGAATATTCACCAAGGGTTTGCATTTGGGAAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp TGGGGTGGCTTCGGTGACATGAAGGATAATGCAAGAGTGGAGACAGGCCAGGGGTTCTTACCCAGGAAGTaGGGAATTCAGTTGACCCTT +
Preference number: 4 (lower is better)
Translates to: WGGFGDMKDNARVETGQGFLPRK*GIQLTL
Trigger: AAGGGTCAACTGAATTCCCCACTTCCTGGGTAAGAA...CCCCTGGCCTGTCTCCACTCTTGCATTATCCTTCATGTCACCGAAGCCACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp AGCAGCTGCCTCTCTGAAGCGCTTTGGTCCCAGAGGGATCAGAAAGAAAAGATTCTTACCAGTGTGAGGTaGAGAAGGCAAGAGCGGAGC +
Preference number: 4 (lower is better)
Translates to: SSCLSEALWSQRDQKEKILTSVR*RRQERS
Trigger: GCTCCGCTCTTGCCTTCTCCACCTCACACTGGTAAG...AATCTTTTCTTTCTGATCCCTCTGGGACCAAAGCGCTTCAGAGAGGCAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR TCA 90 bp GGGGCTCCTTTCTCTCATCAGAAGCTTCCCCATGGCAAGAGGAATGACTGCCAGGTCACTCTGTCCAGTTaGTTTCCCTTCATCATCCAA +
Preference number: 4 (lower is better)
Translates to: GAPFSHQKLPHGKRNDCQVTLSS*FPFIIQ
Trigger: TTGGATGATGAAGGGAAATCAACTGGACAGAGTGAC...CTGGCAGTCATTCCTCTTGCCATGGGGAAGCTTCTGATGAGAGAAAGGAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp ATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATTTACTGAAGCAGGCTGTCTaGGACACTGGGGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: IQGDPAGNGRLHPATQYLLKQAV*DTGEGG
Trigger: GCCACCTTCCCCAGTGTCTCAGACAGCCTGCTTCAG...TAAATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp CGTGAAATTAAAAGGAGATCATGCTTCTTACCCAGGAAGTGGGGAATTCAGTTGTCTCTCTGCGGGCACTaGGGGGCCAATCCCCAACCT +
Preference number: 4 (lower is better)
Translates to: REIKRRSCFLPRKWGIQLSLCGH*GANPQP
Trigger: AGGTTGGGGATTGGCCCCTCAGTGCCCGCAGAGAGA...CAACTGAATTCCCCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAATTTCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp ATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATTTAGCTTCAAGGCCTGGGTaGAGAGGACCACGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: IQGDPAGNGRLHPATQYLASRPG*RGPRPH
Trigger: ATGAGGCCGTGGTCCTCTTCACCCAGGCCTTGAAGC...TAAATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp AAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACACTGGAGGGCCCCAGGTaGCAGAGGTGGTGCACAGAT +
Preference number: 4 (lower is better)
Translates to: KICSELSPHYVPHQGIYTLEGPR*QRWCTD
Trigger: ATCTGTGCACCACCTCTGTCACCTGGGGCCCTCCAG...TGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR TCA 90 bp TCAAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATATGCTTCGAGGGCACCTaGGGGAAGGTAGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SKYAVNCHHTMSPTKGYICFEGT*GKVGLR
Trigger: CCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCA...TATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR TCA 90 bp CGTGAAATTAAAAGGAGATCATGCTTCTTACCCAGGAAGTGGGGAATTCAGTTGTGCTTCGAGGGCACCTaGGGGAAGGTAGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: REIKRRSCFLPRKWGIQLCFEGT*GKVGLR
Trigger: CCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCA...CAACTGAATTCCCCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAATTTCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp CGTGAAATTAAAAGGAGATCATGCTTCTTACCCAGGAAGTGGGGAATTCAGTTGTGGGGCCTTCTACTCTaGGTCTGGGAGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: REIKRRSCFLPRKWGIQLWGLLL*VWERGW
Trigger: CCAGCCCCTCTCCCAGACTCAGAGTAGAAGGCCCCA...CAACTGAATTCCCCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAATTTCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp TCAAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACCCCCTCATCTGGCCTaGGACAGATGCTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SKYAVNCHHTMSPTKGYIPPHLA*DRCWSP
Trigger: TGGGCTCCAGCATCTGTCTCAGGCCAGATGAGGGGG...TATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR TCA 90 bp CTTCCCCATGGCAAGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGATGGCATGAGGAGCTGTaGGTAATCTGGGGGCTATGG +
Preference number: 4 (lower is better)
Translates to: LPHGKRNDCQGIINYGSRWHEEL*VIWGLW
Trigger: CCATAGCCCCCAGATTACTCACAGCTCCTCATGCCA...TCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCTTGCCATGGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp GTGAATATTCTAGCAGTGAGAGGAGGTGAGCACCAGACCACTGGACAAGAGAGGGGACAGGAAATGGCATaGGGAGCTGTGAGTAATCTG +
Preference number: 4 (lower is better)
Translates to: VNILAVRGGEHQTTGQERGQEMA*GAVSNL
Trigger: CAGATTACTCACAGCTCCTCATGCCATTTCCTGTCC...CCTCTCTTGTCCAGTGGTCTGGTGCTCACCTCCTCTCACTGCTAGAATATTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp CCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATTTAAGGGGCCTAAACAGCAGTGAGAGGAGGTaGGCACCAGACCACTGGACA +
Preference number: 4 (lower is better)
Translates to: PAGNGRLHPATQYLRGLNSSERR*APDHWT
Trigger: TGTCCAGTGGTCTGGTGCTCACCTCCTCTCACTGCT...GTTTAGGCCCCTTAAATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp CGTGAAATTAAAAGGAGATCATGCTTCTTACCCAGGAAGTGGGGAATTCAGTTGGGAGACCACAGTAGGTaGCCAGTCCCTCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: REIKRRSCFLPRKWGIQLGDHSR*PVPQPP
Trigger: AGGGGGCTGAGGGACTGGGCACCTACTGTGGTCTCC...CAACTGAATTCCCCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAATTTCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp CTTAGACGTGAAATTAAAAGGAGATCATGCTTCTTACCCAGGAAGTGGGGAATTGGAGGGCCAGACCCCTaGCTTGGGGCTCCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: LRREIKRRSCFLPRKWGIGGPDP*LGAPGS
Trigger: TGAACCAGGAGCCCCAAGGCAGGGGTCTGGCCCTCC...AATTCCCCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAATTTCACGTCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp AAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACACCTATGAGGGACCGGTaGCCCCTCATCTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: KICSELSPHYVPHQGIYTPMRDR*PLIWPE
Trigger: CTCAGGCCAGATGAGGGGGCACCGGTCCCTCATAGG...TGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR GCA 90 bp GCTTTCCATCCTCACAATATCCCTTATGAGGTAGGGACTACCCTCATTTTTACACCTATGAGGGACCGGTaGCCCCTCATCTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: AFHPHNIPYEVGTTLIFTPMRDR*PLIWPE
Trigger: CTCAGGCCAGATGAGGGGGCACCGGTCCCTCATAGG...TGTAAAAATGAGGGTAGTCCCTACCTCATAAGGGATATTGTGAGGATGGAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp ATCCCACTCAAATCTCTCCTGTTTCCAGCCCCAGACCTATTACCTGTAGTCCCAATATATACATGGCCCTaGCCTATGAGGGACCGGTGC +
Preference number: 4 (lower is better)
Translates to: IPLKSLLFPAPDLLPVVPIYTWP*PMRDRC
Trigger: GCACCGGTCCCTCATAGGGCAGGGCCATGTATATAT...TGGGACTACAGGTAATAGGTCTGGGGCTGGAAACAGGAGAGATTTGAGTGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410003.5
CDS-3UTR CCA 90 bp ATGTTTCAATACCTTCTCTCTCCAGGTATGAACAGTATTGAGCAAGACCCACAGCTGCTCCCATCCACATaGATCCGGTGCAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: MFQYLLSPGMNSIEQDPQLLPST*IRCRPW
Trigger: CCAGGGCCTGCACCGGATCCATGTGGATGGGAGCAG...CTGTGGGTCTTGCTCAATACTGTTCATACCTGGAGAGAGAAGGTATTGAAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000233623.11
ENST00000410003.5
CDS-3UTR CCA 90 bp CTAAAGCCTTCTGCAGACCCACATTTAAATGAGCTGACAGTCCCAGCAGGACTAAATAACCGGTGGTCCTaGGGGTTGAGCTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: LKPSADPHLNELTVPAGLNNRWS*GLSFKA
Trigger: GGCCTTGAAGCTCAACCCCCAGGACCACCGGTTATT...TAGTCCTGCTGGGACTGTCAGCTCATTTAAATGTGGGTCTGCAGAAGGCTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233623.11
ENST00000424122.5
CDS-3UTR CCA 90 bp TCAAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATAGGGAGAGGGGCTGGTTaGGGTGGCTTCGGTGACATG +
Preference number: 4 (lower is better)
Translates to: SKYAVNCHHTMSPTKGYIGRGAG*GGFGDM
Trigger: CATGTCACCGAAGCCACCCCAACCAGCCCCTCTCCC...TATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR CCA 90 bp ATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATTTACCCTTTGAAGGGTCCTaGGGCTTGAGAGGATGGGGC +
Preference number: 4 (lower is better)
Translates to: IQGDPAGNGRLHPATQYLPFEGS*GLRGWG
Trigger: GCCCCATCCTCTCAAGCCCCAGGACCCTTCAAAGGG...TAAATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp ATCCCACTCAAATCTCTCCTGTTTCCAGCCCCAGACCTATTACCTGTAGTCCCACACCAGTTGGGAGTGTaGACATGTATGGCCCTACCA +
Preference number: 4 (lower is better)
Translates to: IPLKSLLFPAPDLLPVVPHQLGV*TCMALP
Trigger: TGGTAGGGCCATACATGTCCACACTCCCAACTGGTG...TGGGACTACAGGTAATAGGTCTGGGGCTGGAAACAGGAGAGATTTGAGTGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410003.5
CDS-3UTR CCA 90 bp AGGAACCAGCTAGGGGAAGCTGCCAGGATCTTAGACGTGAAATTAAAAGGAGATAAGGTTGTAGCAGCTTaGGCACCTGCTGAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: RNQLGEAARILDVKLKGDKVVAA*APAEAP
Trigger: TGGGGCCTCAGCAGGTGCCCAAGCTGCTACAACCTT...ATCTCCTTTTAATTTCACGTCTAAGATCCTGGCAGCTTCCCCTAGCTGGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp CTTCCCCATGGCAAGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGATACCATGCCCAGTGCTaGGGTGGAGAAACAGAGTGG +
Preference number: 4 (lower is better)
Translates to: LPHGKRNDCQGIINYGSRYHAQC*GGETEW
Trigger: CCACTCTGTTTCTCCACCCCAGCACTGGGCATGGTA...TCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCTTGCCATGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp GCAAGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGAGAATAAGGTCGCTCTCATCTCCATCTaGGGTAGTGCTGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: ARGMTARASLTMDLENKVALISI*GSAGLG
Trigger: CCCAAGGCCAGCACTACCTCAGATGGAGATGAGAGC...GACCTTATTCTCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp AAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACAGCTTCAAGGCCTGGGTaGAGAGGACCACGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: KICSELSPHYVPHQGIYTASRPG*RGPRPH
Trigger: ATGAGGCCGTGGTCCTCTTCACCCAGGCCTTGAAGC...TGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR TCA 90 bp AAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATGCTGACCCTGCAGTGTaGGGTGGAGAAGGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: KYAVNCHHTMSPTKGYIHADPAV*GGEGKS
Trigger: GCTCTTGCCTTCTCCACCTCACACTGCAGGGTCAGC...ATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233623.11
ENST00000424122.5
CDS-3UTR TCA 90 bp TCAAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACAGATTCCTCCTCGCTaGCCCTGCAGTGTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SKYAVNCHHTMSPTKGYIQIPPR*PCSVRW
Trigger: CCACCTCACACTGCAGGGTCAGCGAGGAGGAATCTG...TATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000233623.11
ENST00000424122.5
CDS-3UTR TCA 90 bp TTAACATGGGGAAAGGCTAATTACCATGCCCAGTGCTGGGGTGGAGAAACAGAGGTGGCTTCGGTGACATaGAGGATAATGCAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: LTWGKANYHAQCWGGETEVASVT*RIMQEW
Trigger: CCACTCTTGCATTATCCTTCATGTCACCGAAGCCAC...CTCTGTTTCTCCACCCCAGCACTGGGCATGGTAATTAGCCTTTCCCCATGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp AAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACAGATGTCCCAGCCCTTTaGAGGGTCCTGGGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: KICSELSPHYVPHQGIYTDVPAL*RVLGLE
Trigger: CTCAAGCCCCAGGACCCTTCAAAGGGCTGGGACATC...TGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR TCA 90 bp AAGGGACTTCCCAAATGCAAACCCTTGGTGAATATTCTAGCAGTGAGAGGAGGTCCAAGCTCTAGTTGGTaGATGAGGTCCCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: KGLPKCKPLVNILAVRGGPSSSW*MRSPGP
Trigger: TGGTCCAGGGGACCTCATTCACCAACTAGAGCTTGG...ACCTCCTCTCACTGCTAGAATATTCACCAAGGGTTTGCATTTGGGAAGTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp AGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGAGAATAAGGTCTCAGGCACGAGCTGGGGCTaGGAAGAGGTGAGCATCCAT +
Preference number: 4 (lower is better)
Translates to: RGMTARASLTMDLENKVSGTSWG*EEVSIH
Trigger: ATGGATGCTCACCTCTTCTCAGCCCCAGCTCGTGCC...TGAGACCTTATTCTCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp CGTGAAATTAAAAGGAGATCATGCTTCTTACCCAGGAAGTGGGGAATTCAGTTGGGCACGAGCTGGGGCTaGGAAGAGGTGAGCATCCAT +
Preference number: 4 (lower is better)
Translates to: REIKRRSCFLPRKWGIQLGTSWG*EEVSIH
Trigger: ATGGATGCTCACCTCTTCTCAGCCCCAGCTCGTGCC...CAACTGAATTCCCCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAATTTCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp CACCAGACCACTGGACAAGAGAGGTCAGAGTCATACATAGCAATCTGGACAGGAGGACAGGAAATGGCATaGGGAGCTGTGAGTAATCTG +
Preference number: 4 (lower is better)
Translates to: HQTTGQERSESYIAIWTGGQEMA*GAVSNL
Trigger: CAGATTACTCACAGCTCCTCATGCCATTTCCTGTCC...TCCTGTCCAGATTGCTATGTATGACTCTGACCTCTCTTGTCCAGTGGTCTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp CTAGGGGAAGCTGCCAGGATCTTAGACGTGAAATTAAAAGGAGATCATGCTTCTAGCAGTGAGAGGAGGTaGGCACCAGACCACTGGACA +
Preference number: 4 (lower is better)
Translates to: LGEAARILDVKLKGDHASSSERR*APDHWT
Trigger: TGTCCAGTGGTCTGGTGCTCACCTCCTCTCACTGCT...AGAAGCATGATCTCCTTTTAATTTCACGTCTAAGATCCTGGCAGCTTCCCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp AAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATCTCGCTGACCCAGTGTaGGGTGGAGAAGGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: KYAVNCHHTMSPTKGYIHLADPV*GGEGKS
Trigger: GCTCTTGCCTTCTCCACCTCACACTGGGTCAGCGAG...ATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414247.1
CDS-3UTR TCA 90 bp AGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGAGAATAAGGTCTCACAGCAGCTGCCTCTCTaGAGCGCTTTGGTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: RGMTARASLTMDLENKVSQQLPL*SALVPE
Trigger: CTCTGGGACCAAAGCGCTTCAGAGAGGCAGCTGCTG...TGAGACCTTATTCTCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410003.5
CDS-3UTR TCA 90 bp AATATCCCTTATGAGGTAGGGACTACCCTCATTTTTACAGGTGAGGGAACTGAGCCCTCCTTAGCCACCTaGGGCTTGGTATTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: NIPYEVGTTLIFTGEGTEPSLAT*GLVLQS
Trigger: GGACTGCAATACCAAGCCTCAGGTGGCTAAGGAGGG...CTCAGTTCCCTCACCTGTAAAAATGAGGGTAGTCCCTACCTCATAAGGGATATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410003.5
CDS-3UTR GCA 90 bp TTAACATGGGGAAAGGCTAATTACCATGCCCAGTGCTGGGGTGGAGAAACAGAGCTGGACCGAATTCCTTaGAAAGTTTGGGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LTWGKANYHAQCWGGETELDRIP*KVWVQQ
Trigger: CTGCTGCACCCAAACTTTGCAAGGAATTCGGTCCAG...CTCTGTTTCTCCACCCCAGCACTGGGCATGGTAATTAGCCTTTCCCCATGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp AGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGAGAATAAGGTCTCAGGCTCCCCACAGTACTaGTCCAAACGCTCCTGTCGC +
Preference number: 4 (lower is better)
Translates to: RGMTARASLTMDLENKVSGSPQY*SKRSCR
Trigger: GCGACAGGAGCGTTTGGAGCAGTACTGTGGGGAGCC...TGAGACCTTATTCTCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp CTAAAGCCTTCTGCAGACCCACATTTAAATGAGCTGACAGTCCCAGCAGGACTAATATATACATGGCCCTaGCCTATGAGGGACCGGTGC +
Preference number: 4 (lower is better)
Translates to: LKPSADPHLNELTVPAGLIYTWP*PMRDRC
Trigger: GCACCGGTCCCTCATAGGGCAGGGCCATGTATATAT...TAGTCCTGCTGGGACTGTCAGCTCATTTAAATGTGGGTCTGCAGAAGGCTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp TCAAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACCGCCCCACAGTCTTTaGAATCGGCGCCATCGCATC +
Preference number: 4 (lower is better)
Translates to: SKYAVNCHHTMSPTKGYIPPHSL*NRRHRI
Trigger: GATGCGATGGCGCCGATTCCAAAGACTGTGGGGCGG...TATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp CGTGAAATTAAAAGGAGATCATGCTTCTTACCCAGGAAGTGGGGAATTCAGTTGCCTCCAGTGGGCAGCTaGGCCGTAGAGAGCAGTCTA +
Preference number: 4 (lower is better)
Translates to: REIKRRSCFLPRKWGIQLPPVGS*AVESSL
Trigger: TAGACTGCTCTCTACGGCCCAGCTGCCCACTGGAGG...CAACTGAATTCCCCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAATTTCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp TCAAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATAGGAGCTTCTGGGGCATaGCCACCTGAAGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SKYAVNCHHTMSPTKGYIGASGA*PPEAGC
Trigger: ACAGCCTGCTTCAGGTGGCCATGCCCCAGAAGCTCC...TATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp CTAGGGGAAGCTGCCAGGATCTTAGACGTGAAATTAAAAGGAGATCATGCTTCTGTTTCCAGGGCTGGATaGGGGGCTCTCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: LGEAARILDVKLKGDHASVSRAG*GALISI
Trigger: GATGGAGATGAGAGCCCCCCATCCAGCCCTGGAAAC...AGAAGCATGATCTCCTTTTAATTTCACGTCTAAGATCCTGGCAGCTTCCCCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp GACAGACCCATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACAAACTTTGCCAGTTCCTaGCTCTGTTGTAAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: DRPIQGDPAGNGRLHPATNFASS*LCCKAA
Trigger: AGCTGCCTTACAACAGAGCCAGGAACTGGCAAAGTT...TGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGATGGGTCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp AGTGGATGTGGGGCTCCTTTCTCTCATCAGAAGCTTCCCCATGGCAAGAGGAATAACTTTGCCAGTTCCTaGCTCTGTTGTAAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SGCGAPFSHQKLPHGKRNNFASS*LCCKAA
Trigger: AGCTGCCTTACAACAGAGCCAGGAACTGGCAAAGTT...ATTCCTCTTGCCATGGGGAAGCTTCTGATGAGAGAAAGGAGCCCCACATCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp CTGGTACCCAACTTTGCCAGTTCCTGGCTCTGTTGTAAGGCAGCTGCCAGCAGTCATTTTGAGCAAAGCTaGTACCCAACTTTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LVPNFASSWLCCKAAASSHFEQS*YPTLPV
Trigger: AACTGGCAAAGTTGGGTACCAGCTTTGCTCAAAATG...ACTGCTGGCAGCTGCCTTACAACAGAGCCAGGAACTGGCAAAGTTGGGTACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
CDS-3UTR CCA 90 bp ATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATGGAATAACCGGTGGTCCTaGGGGTTGAGCTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: ICSELSPHYVPHQGIYTWNNRWS*GLSFKA
Trigger: GGCCTTGAAGCTCAACCCCCAGGACCACCGGTTATT...CCATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000414247.1
ENST00000424122.5
CDS-3UTR CCA 90 bp CCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATTTAAGGGGCCTAAACAATAACCGGTGGTCCTaGGGGTTGAGCTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: PAGNGRLHPATQYLRGLNNNRWS*GLSFKA
Trigger: GGCCTTGAAGCTCAACCCCCAGGACCACCGGTTATT...GTTTAGGCCCCTTAAATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000233623.11
ENST00000424122.5
CDS-3UTR CCA 90 bp AAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATCCCTTTGAAGGGTCCTaGGGCTTGAGAGGATGGGGC +
Preference number: 4 (lower is better)
Translates to: KYAVNCHHTMSPTKGYIHPFEGS*GLRGWG
Trigger: GCCCCATCCTCTCAAGCCCCAGGACCCTTCAAAGGG...ATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR CCA 90 bp AAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACACGGTGCCCCCTCATCTaGCCTGAGACAGATGCTGGA +
Preference number: 4 (lower is better)
Translates to: KICSELSPHYVPHQGIYTRCPLI*PETDAG
Trigger: TCCAGCATCTGTCTCAGGCCAGATGAGGGGGCACCG...TGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR CCA 90 bp CCTTTCTCTCATCAGAAGCTTCCCCATGGCAAGAGGAATGACTGCCAGGGCATCATGTTTCAGTGGATGTaGGGCTCCTTTCTCTCATCA +
Preference number: 4 (lower is better)
Translates to: PFSHQKLPHGKRNDCQGIMFQWM*GSFLSS
Trigger: TGATGAGAGAAAGGAGCCCCACATCCACTGAAACAT...GATGCCCTGGCAGTCATTCCTCTTGCCATGGGGAAGCTTCTGATGAGAGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp AGTGGATGTGGGGCTCCTTTCTCTCATCAGAAGCTTCCCCATGGCAAGAGGAATCAAAGGATGTTTCAGTaGATGTGGGGCTCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: SGCGAPFSHQKLPHGKRNQRMFQ*MWGSFL
Trigger: GAGAAAGGAGCCCCACATCCACTGAAACATCCTTTG...ATTCCTCTTGCCATGGGGAAGCTTCTGATGAGAGAAAGGAGCCCCACATCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp TTAACATGGGGAAAGGCTAATTACCATGCCCAGTGCTGGGGTGGAGAAACAGAGGTAATCTGGGGGCTATaGCTAGAAAAACAGGGCACG +
Preference number: 4 (lower is better)
Translates to: LTWGKANYHAQCWGGETEVIWGL*LEKQGT
Trigger: CGTGCCCTGTTTTTCTAGCCATAGCCCCCAGATTAC...CTCTGTTTCTCCACCCCAGCACTGGGCATGGTAATTAGCCTTTCCCCATGTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp ACCCACAGGGCAGCAATAATCATTTATCCTGATGAAAGGTTCCTCTGTGAAAGGTGCCCAGTGCTGGGGTaGAGAAACAGAGTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: THRAAIIIYPDERFLCERCPVLG*RNRVAK
Trigger: CTTGGCCACTCTGTTTCTCCACCCCAGCACTGGGCA...CCTTTCACAGAGGAACCTTTCATCAGGATAAATGATTATTGCTGCCCTGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp AAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACAACCTACCGGTGGTCCTaGGGGTTGAGCTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: KICSELSPHYVPHQGIYTTYRWS*GLSFKA
Trigger: GGCCTTGAAGCTCAACCCCCAGGACCACCGGTAGGT...TGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000410003.5
CDS-3UTR TCA 90 bp ATGTTTCAATACCTTCTCTCTCCAGGTATGAACAGTATTGAGCAAGACCCACAGTCACCACACTGTCCCTaGACTGGGTTTCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: MFQYLLSPGMNSIEQDPQSPHCP*TGFPGL
Trigger: CAGCCCTGGAAACCCAGTTCAGGGACAGTGTGGTGA...CTGTGGGTCTTGCTCAATACTGTTCATACCTGGAGAGAGAAGGTATTGAAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp GCAAGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGAGAATAAGGTCCCAAGCTCTAGTTGGTaGATGAGGTCCCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: ARGMTARASLTMDLENKVPSSSW*MRSPGP
Trigger: TGGTCCAGGGGACCTCATTCACCAACTAGAGCTTGG...GACCTTATTCTCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp CCAGGTATGAACAGTATTGAGCAAGACCCACAGGGCAGCAATAATCATTTATCCGAGCATCCATCAAGCTaGAAGGTGGGACTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: PGMNSIEQDPQGSNNHLSEHPSS*KVGLKP
Trigger: GGGCTTGAGTCCCACCTTTCAGCTTGATGGATGCTC...GGATAAATGATTATTGCTGCCCTGTGGGTCTTGCTCAATACTGTTCATACCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp AAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATCAGATTCCTCCTCGCTaGCCCAGTGTGAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: KYAVNCHHTMSPTKGYIHQIPPR*PSVRWR
Trigger: TCTCCACCTCACACTGGGTCAGCGAGGAGGAATCTG...ATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414247.1
CDS-3UTR GCA 90 bp GGACTTCCCAAATGCAAACCCTTGGTGAATATTCTAGCAGTGAGAGGAGGTGAGCTGGACCGAATTCCTTaGAAAGTTTGGGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GLPKCKPLVNILAVRGGELDRIP*KVWVQQ
Trigger: CTGCTGCACCCAAACTTTGCAAGGAATTCGGTCCAG...CTCACCTCCTCTCACTGCTAGAATATTCACCAAGGGTTTGCATTTGGGAAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp CTTAGACGTGAAATTAAAAGGAGATCATGCTTCTTACCCAGGAAGTGGGGAATTGGCTCCCCACAGTACTaGTCCAAACGCTCCTGTCGC +
Preference number: 4 (lower is better)
Translates to: LRREIKRRSCFLPRKWGIGSPQY*SKRSCR
Trigger: GCGACAGGAGCGTTTGGAGCAGTACTGTGGGGAGCC...AATTCCCCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAATTTCACGTCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp CCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATTTAAGGGGCCTAAACGCCAATCCCCAACCTTaGGCAAAGCCAGAGACACAA +
Preference number: 4 (lower is better)
Translates to: PAGNGRLHPATQYLRGLNANPQP*AKPETQ
Trigger: TTGTGTCTCTGGCTTTGCGCAAGGTTGGGGATTGGC...GTTTAGGCCCCTTAAATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp ATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATGGGCTGGTACCCAACTTTaGCAGTTCCTGGCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: ICSELSPHYVPHQGIYTWAGTQL*QFLALL
Trigger: CAACAGAGCCAGGAACTGGCAAAGTTGGGTACCAGC...CCATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR GCA 90 bp ATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATGGATATATACATGGCCCTaGCCTATGAGGGACCGGTGC +
Preference number: 4 (lower is better)
Translates to: ICSELSPHYVPHQGIYTWIYTWP*PMRDRC
Trigger: GCACCGGTCCCTCATAGGGCAGGGCCATGTATATAT...CCATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR CCA 90 bp CAAGAGAGGTCAGAGTCATACATAGCAATCTGGACAGGAAATGGCATGAGGAGCATTCCTTGCAAAGTTTaGGTGCAGCAGCGACCTCCA +
Preference number: 4 (lower is better)
Translates to: QERSESYIAIWTGNGMRSIPCKV*VQQRPP
Trigger: TGGAGGTCGCTGCTGCACCCAAACTTTGCAAGGAAT...GCTCCTCATGCCATTTCCTGTCCAGATTGCTATGTATGACTCTGACCTCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp TTAACATGGGGAAAGGCTAATTACCATGCCCAGTGCTGGGGTGGAGAAACAGAGTTCGCCGTAATCCTCTaGACCGAATTCCTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LTWGKANYHAQCWGGETEFAVIL*TEFLAK
Trigger: CTTTGCAAGGAATTCGGTCCAGAGGATTACGGCGAA...CTCTGTTTCTCCACCCCAGCACTGGGCATGGTAATTAGCCTTTCCCCATGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp ATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATTTACAGGGCTCAGACTCTTaGGGAGGATACAGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: IQGDPAGNGRLHPATQYLQGSDS*GGYRKD
Trigger: GTCCTTCCTGTATCCTCCCCAAGAGTCTGAGCCCTG...TAAATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp GCAAGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGAGAATAAGGTCCCTCAGCCAGGCGATTaGCTTCCTCTTCTGTCACCA +
Preference number: 4 (lower is better)
Translates to: ARGMTARASLTMDLENKVPQPGD*LPLLSP
Trigger: TGGTGACAGAAGAGGAAGCCAATCGCCTGGCTGAGG...GACCTTATTCTCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp ATTAAAAGGAGATCATGCTTCTTACCCAGGAAGTGGGGAATTCAGTTGACCCTTGTTTCCAGGGCTGGATaGGGGGCTCTCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: IKRRSCFLPRKWGIQLTLVSRAG*GALISI
Trigger: GATGGAGATGAGAGCCCCCCATCCAGCCCTGGAAAC...AAGGGTCAACTGAATTCCCCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp AAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACACTGCCTTGGGGCTCCTaGTTCAGTCCCTTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: KICSELSPHYVPHQGIYTLPWGS*FSPFSL
Trigger: CAGAGAGAAGGGACTGAACCAGGAGCCCCAAGGCAG...TGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp ATCCCACTCAAATCTCTCCTGTTTCCAGCCCCAGACCTATTACCTGTAGTCCCAAACTTTGCCAGTTCCTaGCTCTGTTGTAAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: IPLKSLLFPAPDLLPVVPNFASS*LCCKAA
Trigger: AGCTGCCTTACAACAGAGCCAGGAACTGGCAAAGTT...TGGGACTACAGGTAATAGGTCTGGGGCTGGAAACAGGAGAGATTTGAGTGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR CCA 90 bp TCAAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATATTGAGCTTCAAGGCCTaGGTGAAGAGGACCACGGCC +
Preference number: 4 (lower is better)
Translates to: SKYAVNCHHTMSPTKGYILSFKA*VKRTTA
Trigger: GGCCGTGGTCCTCTTCACCCAGGCCTTGAAGCTCAA...TATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR CCA 90 bp AGAGGAGGTGAGCACCAGACCACTGGACAAGAGAGGTCAGAGTCATACATAGCAATGTTTCAGTGGATGTaGGGCTCCTTTCTCTCATCA +
Preference number: 4 (lower is better)
Translates to: RGGEHQTTGQERSESYIAMFQWM*GSFLSS
Trigger: TGATGAGAGAAAGGAGCCCCACATCCACTGAAACAT...TGCTATGTATGACTCTGACCTCTCTTGTCCAGTGGTCTGGTGCTCACCTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp CTAAAGCCTTCTGCAGACCCACATTTAAATGAGCTGACAGTCCCAGCAGGACTAGTGAATGAGGTCCCCTaGACCAAGAGGAAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: LKPSADPHLNELTVPAGLVNEVP*TKRKRK
Trigger: CTTTCTCTTCCTCTTGGTCCAGGGGACCTCATTCAC...TAGTCCTGCTGGGACTGTCAGCTCATTTAAATGTGGGTCTGCAGAAGGCTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp CCAGGTATGAACAGTATTGAGCAAGACCCACAGGGCAGCAATAATCATTTATCCGGGAGAGCCACCAGTTaGGAGTGTGGACATGTATGG +
Preference number: 4 (lower is better)
Translates to: PGMNSIEQDPQGSNNHLSGRATS*ECGHVW
Trigger: CCATACATGTCCACACTCCCAACTGGTGGCTCTCCC...GGATAAATGATTATTGCTGCCCTGTGGGTCTTGCTCAATACTGTTCATACCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp GCAAGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGAGAATAAGGTCGGGAGAGCCACCAGTTaGGAGTGTGGACATGTATGG +
Preference number: 4 (lower is better)
Translates to: ARGMTARASLTMDLENKVGRATS*ECGHVW
Trigger: CCATACATGTCCACACTCCCAACTGGTGGCTCTCCC...GACCTTATTCTCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp AAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACAAAGGTTGTAGCAGCTTaGGCACCTGCTGAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: KICSELSPHYVPHQGIYTKVVAA*APAEAP
Trigger: TGGGGCCTCAGCAGGTGCCCAAGCTGCTACAACCTT...TGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp TCAAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATAGCTCTAGTTGGTGAATaGGGTCCCCTGGACCAAGAG +
Preference number: 4 (lower is better)
Translates to: SKYAVNCHHTMSPTKGYIALVGE*GPLDQE
Trigger: CTCTTGGTCCAGGGGACCTCATTCACCAACTAGAGC...TATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp ATTAAAAGGAGATCATGCTTCTTACCCAGGAAGTGGGGAATTCAGTTGACCCTTGCTCTAGTTGGTGAATaGGGTCCCCTGGACCAAGAG +
Preference number: 4 (lower is better)
Translates to: IKRRSCFLPRKWGIQLTLALVGE*GPLDQE
Trigger: CTCTTGGTCCAGGGGACCTCATTCACCAACTAGAGC...AAGGGTCAACTGAATTCCCCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp AAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACAGAGCATCCATCAAGCTaGAAGGTGGGACTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: KICSELSPHYVPHQGIYTEHPSS*KVGLKP
Trigger: GGGCTTGAGTCCCACCTTTCAGCTTGATGGATGCTC...TGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp AAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATTGGCATGAGGAGCTGTaGGTAATCTGGGGGCTATGG +
Preference number: 4 (lower is better)
Translates to: KYAVNCHHTMSPTKGYIHWHEEL*VIWGLW
Trigger: CCATAGCCCCCAGATTACTCACAGCTCCTCATGCCA...ATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp AGGAACCAGCTAGGGGAAGCTGCCAGGATCTTAGACGTGAAATTAAAAGGAGATGGACAGGAAATGGCATaGGGAGCTGTGAGTAATCTG +
Preference number: 4 (lower is better)
Translates to: RNQLGEAARILDVKLKGDGQEMA*GAVSNL
Trigger: CAGATTACTCACAGCTCCTCATGCCATTTCCTGTCC...ATCTCCTTTTAATTTCACGTCTAAGATCCTGGCAGCTTCCCCTAGCTGGTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp CCCATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATTTCTCTCTCCAGGTATaGACAGTATTGAGCAAGACC +
Preference number: 4 (lower is better)
Translates to: PIQGDPAGNGRLHPATQYFSLQV*TVLSKT
Trigger: GGTCTTGCTCAATACTGTTCATACCTGGAGAGAGAA...ATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp ACCCACAGGGCAGCAATAATCATTTATCCTGATGAAAGGTTCCTCTGTGAAAGGGATACAGGAAGGACTTaGGGAGACCACAGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: THRAAIIIYPDERFLCERDTGRT*GDHSRC
Trigger: GCACCTACTGTGGTCTCCGCAAGTCCTTCCTGTATC...CCTTTCACAGAGGAACCTTTCATCAGGATAAATGATTATTGCTGCCCTGTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp CCAGGTATGAACAGTATTGAGCAAGACCCACAGGGCAGCAATAATCATTTATCCGCCAATCCCCAACCTTaGGCAAAGCCAGAGACACAA +
Preference number: 4 (lower is better)
Translates to: PGMNSIEQDPQGSNNHLSANPQP*AKPETQ
Trigger: TTGTGTCTCTGGCTTTGCGCAAGGTTGGGGATTGGC...GGATAAATGATTATTGCTGCCCTGTGGGTCTTGCTCAATACTGTTCATACCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp ACCCACAGGGCAGCAATAATCATTTATCCTGATGAAAGGTTCCTCTGTGAAAGGGCTGGTACCCAACTTTaGCAGTTCCTGGCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: THRAAIIIYPDERFLCERAGTQL*QFLALL
Trigger: CAACAGAGCCAGGAACTGGCAAAGTTGGGTACCAGC...CCTTTCACAGAGGAACCTTTCATCAGGATAAATGATTATTGCTGCCCTGTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp CAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATTTAAGGAATTACCATGCCCAGTaGTGGGGTGGAGAAACAGAG +
Preference number: 4 (lower is better)
Translates to: QGDPAGNGRLHPATQYLRNYHAQ*WGGETE
Trigger: CTCTGTTTCTCCACCCCAGCACTGGGCATGGTAATT...CCTTAAATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp CCTTTCTCTCATCAGAAGCTTCCCCATGGCAAGAGGAATGACTGCCAGGGCATCATTAAAAGGAGATCATaGTTCTTACCCAGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: PFSHQKLPHGKRNDCQGIIKRRS*FLPRKW
Trigger: CCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAAT...GATGCCCTGGCAGTCATTCCTCTTGCCATGGGGAAGCTTCTGATGAGAGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp AGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGAGAATAAGGTCTCAAAGCAGGAGAGCCCATaGCTCTCATTCCACCCATCC +
Preference number: 4 (lower is better)
Translates to: RGMTARASLTMDLENKVSKQESP*LSFHPS
Trigger: GGATGGGTGGAATGAGAGGCATGGGCTCTCCTGCTT...TGAGACCTTATTCTCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410003.5
CDS-3UTR GCA 90 bp AGCAGCTGCCTCTCTGAAGCGCTTTGGTCCCAGAGGGATCAGAAAGAAAAGATTTTCGCATTCCATCTTTaGAGCTCTATGAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: SSCLSEALWSQRDQKEKIFAFHL*SSMRQA
Trigger: TGCCTGTCTCATAGAGCTGCAAAGATGGAATGCGAA...AATCTTTTCTTTCTGATCCCTCTGGGACCAAAGCGCTTCAGAGAGGCAGCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449459.5
CDS-3UTR CCA 90 bp TCAAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATAACACTGTCCCTGAACTaGGTTTCCAGGGCTGGATGG +
Preference number: 4 (lower is better)
Translates to: SKYAVNCHHTMSPTKGYITLSLN*VSRAGW
Trigger: CCATCCAGCCCTGGAAACCCAGTTCAGGGACAGTGT...TATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp TCAAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATAAGATGCCTGTACCTTTaGACTCTGCTGGGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: SKYAVNCHHTMSPTKGYIRCLYL*TLLGPL
Trigger: GAGAGGCCCCAGCAGAGTCCAAAGGTACAGGCATCT...TATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
CDS-3UTR CCA 90 bp AGAGGAGGTGAGCACCAGACCACTGGACAAGAGAGGTCAGAGTCATACATAGCACATTTTGAGCAAAGCTaGTACCCAACTTTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: RGGEHQTTGQERSESYIAHFEQS*YPTLPV
Trigger: AACTGGCAAAGTTGGGTACCAGCTTTGCTCAAAATG...TGCTATGTATGACTCTGACCTCTCTTGTCCAGTGGTCTGGTGCTCACCTCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp AAGGGACTTCCCAAATGCAAACCCTTGGTGAATATTCTAGCAGTGAGAGGAGGTCAAGGGATATATACATaGCCCTGCCCTATGAGGGAC +
Preference number: 4 (lower is better)
Translates to: KGLPKCKPLVNILAVRGGQGIYT*PCPMRD
Trigger: GTCCCTCATAGGGCAGGGCCATGTATATATCCCTTG...ACCTCCTCTCACTGCTAGAATATTCACCAAGGGTTTGCATTTGGGAAGTCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp CAAGAGAGGTCAGAGTCATACATAGCAATCTGGACAGGAAATGGCATGAGGAGCCAAAGGATGTTTCAGTaGATGTGGGGCTCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: QERSESYIAIWTGNGMRSQRMFQ*MWGSFL
Trigger: GAGAAAGGAGCCCCACATCCACTGAAACATCCTTTG...GCTCCTCATGCCATTTCCTGTCCAGATTGCTATGTATGACTCTGACCTCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp CTAAAGCCTTCTGCAGACCCACATTTAAATGAGCTGACAGTCCCAGCAGGACTACAAAGGATGTTTCAGTaGATGTGGGGCTCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LKPSADPHLNELTVPAGLQRMFQ*MWGSFL
Trigger: GAGAAAGGAGCCCCACATCCACTGAAACATCCTTTG...TAGTCCTGCTGGGACTGTCAGCTCATTTAAATGTGGGTCTGCAGAAGGCTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp AGGAACCAGCTAGGGGAAGCTGCCAGGATCTTAGACGTGAAATTAAAAGGAGATGTAATCTGGGGGCTATaGCTAGAAAAACAGGGCACG +
Preference number: 4 (lower is better)
Translates to: RNQLGEAARILDVKLKGDVIWGL*LEKQGT
Trigger: CGTGCCCTGTTTTTCTAGCCATAGCCCCCAGATTAC...ATCTCCTTTTAATTTCACGTCTAAGATCCTGGCAGCTTCCCCTAGCTGGTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp CTTAGACGTGAAATTAAAAGGAGATCATGCTTCTTACCCAGGAAGTGGGGAATTGCTCTAGTTGGTGAATaGGGTCCCCTGGACCAAGAG +
Preference number: 4 (lower is better)
Translates to: LRREIKRRSCFLPRKWGIALVGE*GPLDQE
Trigger: CTCTTGGTCCAGGGGACCTCATTCACCAACTAGAGC...AATTCCCCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAATTTCACGTCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp CTAAAGCCTTCTGCAGACCCACATTTAAATGAGCTGACAGTCCCAGCAGGACTATTCTCTCTCCAGGTATaGACAGTATTGAGCAAGACC +
Preference number: 4 (lower is better)
Translates to: LKPSADPHLNELTVPAGLFSLQV*TVLSKT
Trigger: GGTCTTGCTCAATACTGTTCATACCTGGAGAGAGAA...TAGTCCTGCTGGGACTGTCAGCTCATTTAAATGTGGGTCTGCAGAAGGCTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp ATTAAAAGGAGATCATGCTTCTTACCCAGGAAGTGGGGAATTCAGTTGACCCTTGCCAATCCCCAACCTTaGGCAAAGCCAGAGACACAA +
Preference number: 4 (lower is better)
Translates to: IKRRSCFLPRKWGIQLTLANPQP*AKPETQ
Trigger: TTGTGTCTCTGGCTTTGCGCAAGGTTGGGGATTGGC...AAGGGTCAACTGAATTCCCCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp GCTTTCCATCCTCACAATATCCCTTATGAGGTAGGGACTACCCTCATTTTTACATGTACCTTTGGACTCTaGTGGGGCCTCTCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: AFHPHNIPYEVGTTLIFTCTFGL*WGLSSL
Trigger: AAGAGAGGAGAGGCCCCAGCAGAGTCCAAAGGTACA...TGTAAAAATGAGGGTAGTCCCTACCTCATAAGGGATATTGTGAGGATGGAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000233623.11
ENST00000410003.5
CDS-3UTR GCA 90 bp AAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATGTACCTTTGGACTCTaGTGGGGCCTCTCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: KICSELSPHYVPHQGIYTCTFGL*WGLSSL
Trigger: AAGAGAGGAGAGGCCCCAGCAGAGTCCAAAGGTACA...TGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
CDS-3UTR GCA 90 bp AGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGAGAATAAGGTCTCAGCTGGTACCCAACTTTaGCAGTTCCTGGCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: RGMTARASLTMDLENKVSAGTQL*QFLALL
Trigger: CAACAGAGCCAGGAACTGGCAAAGTTGGGTACCAGC...TGAGACCTTATTCTCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp ATTAAAAGGAGATCATGCTTCTTACCCAGGAAGTGGGGAATTCAGTTGACCCTTATATATACATGGCCCTaGCCTATGAGGGACCGGTGC +
Preference number: 4 (lower is better)
Translates to: IKRRSCFLPRKWGIQLTLIYTWP*PMRDRC
Trigger: GCACCGGTCCCTCATAGGGCAGGGCCATGTATATAT...AAGGGTCAACTGAATTCCCCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp CTAAAGCCTTCTGCAGACCCACATTTAAATGAGCTGACAGTCCCAGCAGGACTAGGCAAGAGGAATGACTaGCAGGGCATCATTAACTAT +
Preference number: 4 (lower is better)
Translates to: LKPSADPHLNELTVPAGLGKRND*QGIINY
Trigger: ATAGTTAATGATGCCCTGGCAGTCATTCCTCTTGCC...TAGTCCTGCTGGGACTGTCAGCTCATTTAAATGTGGGTCTGCAGAAGGCTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp ATGGTAGAAACCATTTTGAGCAAAGCTGGTACCCAACTTTGCCAGTTCCTGGCTTTCGCCGTAATCCTCTaGACCGAATTCCTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: MVETILSKAGTQLCQFLAFAVIL*TEFLAK
Trigger: CTTTGCAAGGAATTCGGTCCAGAGGATTACGGCGAA...AGCCAGGAACTGGCAAAGTTGGGTACCAGCTTTGCTCAAAATGGTTTCTACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
CDS-3UTR CCA 90 bp CACCAGACCACTGGACAAGAGAGGTCAGAGTCATACATAGCAATCTGGACAGGACATTTTGAGCAAAGCTaGTACCCAACTTTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: HQTTGQERSESYIAIWTGHFEQS*YPTLPV
Trigger: AACTGGCAAAGTTGGGTACCAGCTTTGCTCAAAATG...TCCTGTCCAGATTGCTATGTATGACTCTGACCTCTCTTGTCCAGTGGTCTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp ATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATTTATTTCCAAATAACCGGTaGTCCTGGGGGTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: IQGDPAGNGRLHPATQYLFPNNR*SWGLSF
Trigger: GAAGCTCAACCCCCAGGACCACCGGTTATTTGGAAA...TAAATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233623.11
ENST00000424122.5
CDS-3UTR CCA 90 bp CTAGGGGAAGCTGCCAGGATCTTAGACGTGAAATTAAAAGGAGATCATGCTTCTCAAGGGATATATACATaGCCCTGCCCTATGAGGGAC +
Preference number: 4 (lower is better)
Translates to: LGEAARILDVKLKGDHASQGIYT*PCPMRD
Trigger: GTCCCTCATAGGGCAGGGCCATGTATATATCCCTTG...AGAAGCATGATCTCCTTTTAATTTCACGTCTAAGATCCTGGCAGCTTCCCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp ATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATTTAGTGAATGAGGTCCCCTaGACCAAGAGGAAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: IQGDPAGNGRLHPATQYLVNEVP*TKRKRK
Trigger: CTTTCTCTTCCTCTTGGTCCAGGGGACCTCATTCAC...TAAATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp AAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACACACCAGTTGGGAGTGTaGACATGTATGGCCCTACCA +
Preference number: 4 (lower is better)
Translates to: KICSELSPHYVPHQGIYTHQLGV*TCMALP
Trigger: TGGTAGGGCCATACATGTCCACACTCCCAACTGGTG...TGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp CGTGAAATTAAAAGGAGATCATGCTTCTTACCCAGGAAGTGGGGAATTCAGTTGCACCAGTTGGGAGTGTaGACATGTATGGCCCTACCA +
Preference number: 4 (lower is better)
Translates to: REIKRRSCFLPRKWGIQLHQLGV*TCMALP
Trigger: TGGTAGGGCCATACATGTCCACACTCCCAACTGGTG...CAACTGAATTCCCCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAATTTCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp AAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATGTGGCTTCGGTGACATaGAGGATAATGCAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: KYAVNCHHTMSPTKGYIHVASVT*RIMQEW
Trigger: CCACTCTTGCATTATCCTTCATGTCACCGAAGCCAC...ATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR TCA 90 bp CGTGAAATTAAAAGGAGATCATGCTTCTTACCCAGGAAGTGGGGAATTCAGTTGGTGGCTTCGGTGACATaGAGGATAATGCAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: REIKRRSCFLPRKWGIQLVASVT*RIMQEW
Trigger: CCACTCTTGCATTATCCTTCATGTCACCGAAGCCAC...CAACTGAATTCCCCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAATTTCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp ATTAAAAGGAGATCATGCTTCTTACCCAGGAAGTGGGGAATTCAGTTGACCCTTAGACCCACATTTAAATaGGCTGACAGTCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: IKRRSCFLPRKWGIQLTLRPTFK*ADSPSR
Trigger: CCTGCTGGGACTGTCAGCTCATTTAAATGTGGGTCT...AAGGGTCAACTGAATTCCCCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp GCTTTCCATCCTCACAATATCCCTTATGAGGTAGGGACTACCCTCATTTTTACAAGGTATGAACAGTATTaGGCAAGACCCACAGGGCAG +
Preference number: 4 (lower is better)
Translates to: AFHPHNIPYEVGTTLIFTRYEQY*ARPTGQ
Trigger: CTGCCCTGTGGGTCTTGCTCAATACTGTTCATACCT...TGTAAAAATGAGGGTAGTCCCTACCTCATAAGGGATATTGTGAGGATGGAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp ATGGTAGAAACCATTTTGAGCAAAGCTGGTACCCAACTTTGCCAGTTCCTGGCTTTCTCTCTCCAGGTATaGACAGTATTGAGCAAGACC +
Preference number: 4 (lower is better)
Translates to: MVETILSKAGTQLCQFLAFSLQV*TVLSKT
Trigger: GGTCTTGCTCAATACTGTTCATACCTGGAGAGAGAA...AGCCAGGAACTGGCAAAGTTGGGTACCAGCTTTGCTCAAAATGGTTTCTACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424122.5
CDS-3UTR CCA 90 bp GCTTTCCATCCTCACAATATCCCTTATGAGGTAGGGACTACCCTCATTTTTACAATTCCTTGCAAAGTTTaGGTGCAGCAGCGACCTCCA +
Preference number: 4 (lower is better)
Translates to: AFHPHNIPYEVGTTLIFTIPCKV*VQQRPP
Trigger: TGGAGGTCGCTGCTGCACCCAAACTTTGCAAGGAAT...TGTAAAAATGAGGGTAGTCCCTACCTCATAAGGGATATTGTGAGGATGGAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp ATTAAAAGGAGATCATGCTTCTTACCCAGGAAGTGGGGAATTCAGTTGACCCTTATTCCTTGCAAAGTTTaGGTGCAGCAGCGACCTCCA +
Preference number: 4 (lower is better)
Translates to: IKRRSCFLPRKWGIQLTLIPCKV*VQQRPP
Trigger: TGGAGGTCGCTGCTGCACCCAAACTTTGCAAGGAAT...AAGGGTCAACTGAATTCCCCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp AAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATTTTCCAAATAACCGGTaGTCCTGGGGGTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: KYAVNCHHTMSPTKGYIHFPNNR*SWGLSF
Trigger: GAAGCTCAACCCCCAGGACCACCGGTTATTTGGAAA...ATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000414247.1
ENST00000424122.5
CDS-3UTR CCA 90 bp TCAAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACAAGGGATATATACATaGCCCTGCCCTATGAGGGAC +
Preference number: 4 (lower is better)
Translates to: SKYAVNCHHTMSPTKGYIQGIYT*PCPMRD
Trigger: GTCCCTCATAGGGCAGGGCCATGTATATATCCCTTG...TATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR CCA 90 bp CTTCCCCATGGCAAGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGATCATACATAGCAATCTaGACAGGAAATGGCATGAGG +
Preference number: 4 (lower is better)
Translates to: LPHGKRNDCQGIINYGSRSYIAI*TGNGMR
Trigger: CCTCATGCCATTTCCTGTCCAGATTGCTATGTATGA...TCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCTTGCCATGGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp CCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATTTAAGGGGCCTAAACTTTGACGCTTCTTCTTaGGTCGCTTTTTCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: PAGNGRLHPATQYLRGLNFDASS*VAFSLL
Trigger: AAGCAGAGAAAAAGCGACTCAAGAAGAAGCGTCAAA...GTTTAGGCCCCTTAAATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp CAAGAGAGGTCAGAGTCATACATAGCAATCTGGACAGGAAATGGCATGAGGAGCTCTCAAAATATGCAGTaGACTGTCACCACACTATGT +
Preference number: 4 (lower is better)
Translates to: QERSESYIAIWTGNGMRSSQNMQ*TVTTLC
Trigger: ACATAGTGTGGTGACAGTTCACTGCATATTTTGAGA...GCTCCTCATGCCATTTCCTGTCCAGATTGCTATGTATGACTCTGACCTCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp CTTCCCCATGGCAAGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGATCTCAAAATATGCAGTaGACTGTCACCACACTATGT +
Preference number: 4 (lower is better)
Translates to: LPHGKRNDCQGIINYGSRSQNMQ*TVTTLC
Trigger: ACATAGTGTGGTGACAGTTCACTGCATATTTTGAGA...TCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCTTGCCATGGGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp ATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATTTACCTCCAGAAGAAGCTTaGGAACCAAAGGATGTTTCA +
Preference number: 4 (lower is better)
Translates to: IQGDPAGNGRLHPATQYLPPEEA*EPKDVS
Trigger: TGAAACATCCTTTGGTTCTCAAGCTTCTTCTGGAGG...TAAATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp AATATCCCTTATGAGGTAGGGACTACCCTCATTTTTACAGGTGAGGGAACTGAGCCTCCAGAAGAAGCTTaGGAACCAAAGGATGTTTCA +
Preference number: 4 (lower is better)
Translates to: NIPYEVGTTLIFTGEGTEPPEEA*EPKDVS
Trigger: TGAAACATCCTTTGGTTCTCAAGCTTCTTCTGGAGG...CTCAGTTCCCTCACCTGTAAAAATGAGGGTAGTCCCTACCTCATAAGGGATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp AATATCCCTTATGAGGTAGGGACTACCCTCATTTTTACAGGTGAGGGAACTGAGGGCAAGAGGAATGACTaGCAGGGCATCATTAACTAT +
Preference number: 4 (lower is better)
Translates to: NIPYEVGTTLIFTGEGTEGKRND*QGIINY
Trigger: ATAGTTAATGATGCCCTGGCAGTCATTCCTCTTGCC...CTCAGTTCCCTCACCTGTAAAAATGAGGGTAGTCCCTACCTCATAAGGGATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp AAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATTCGCCGTAATCCTCTaGACCGAATTCCTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: KICSELSPHYVPHQGIYTFAVIL*TEFLAK
Trigger: CTTTGCAAGGAATTCGGTCCAGAGGATTACGGCGAA...TGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp AAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATAACTTTGCCAGTTCCTaGCTCTGTTGTAAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: KYAVNCHHTMSPTKGYIHNFASS*LCCKAA
Trigger: AGCTGCCTTACAACAGAGCCAGGAACTGGCAAAGTT...ATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR CCA 90 bp ATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATGGCATTTTGAGCAAAGCTaGTACCCAACTTTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: ICSELSPHYVPHQGIYTWHFEQS*YPTLPV
Trigger: AACTGGCAAAGTTGGGTACCAGCTTTGCTCAAAATG...CCATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR TCA 90 bp ATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATGGTCTCAAAATATGCAGTaGACTGTCACCACACTATGT +
Preference number: 4 (lower is better)
Translates to: ICSELSPHYVPHQGIYTWSQNMQ*TVTTLC
Trigger: ACATAGTGTGGTGACAGTTCACTGCATATTTTGAGA...CCATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR GCA 90 bp CATTGTGACACTTTGGTACTAGAAGCTTATCTAGAAAGTCAACATAGACCCTCTCTGGACCGAATTCCTTaGAAAGTTTGGGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: HCDTLVLEAYLESQHRPSLDRIP*KVWVQQ
Trigger: CTGCTGCACCCAAACTTTGCAAGGAATTCGGTCCAG...AGAGGGTCTATGTTGACTTTCTAGATAAGCTTCTAGTACCAAAGTGTCACAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR CCA 90 bp AGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGAGAATAAGGTCTCAATGTTTCAGTGGATGTaGGGCTCCTTTCTCTCATCA +
Preference number: 4 (lower is better)
Translates to: RGMTARASLTMDLENKVSMFQWM*GSFLSS
Trigger: TGATGAGAGAAAGGAGCCCCACATCCACTGAAACAT...TGAGACCTTATTCTCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp ATTAAAAGGAGATCATGCTTCTTACCCAGGAAGTGGGGAATTCAGTTGACCCTTTTCTTACCCAGGAAGTaGGGAATTCAGTTGACCCTT +
Preference number: 4 (lower is better)
Translates to: IKRRSCFLPRKWGIQLTLFLPRK*GIQLTL
Trigger: AAGGGTCAACTGAATTCCCCACTTCCTGGGTAAGAA...AAGGGTCAACTGAATTCCCCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp ATGTTTCAATACCTTCTCTCTCCAGGTATGAACAGTATTGAGCAAGACCCACAGTTCTTACCCAGGAAGTaGGGAATTCAGTTGACCCTT +
Preference number: 4 (lower is better)
Translates to: MFQYLLSPGMNSIEQDPQFLPRK*GIQLTL
Trigger: AAGGGTCAACTGAATTCCCCACTTCCTGGGTAAGAA...CTGTGGGTCTTGCTCAATACTGTTCATACCTGGAGAGAGAAGGTATTGAAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp AAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATTTGACGCTTCTTCTTaGGTCGCTTTTTCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: KICSELSPHYVPHQGIYTFDASS*VAFSLL
Trigger: AAGCAGAGAAAAAGCGACTCAAGAAGAAGCGTCAAA...TGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp ATCCAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATTTAAAGGGACTTCCCAAATaGAAACCCTTGGTGAATATT +
Preference number: 4 (lower is better)
Translates to: IQGDPAGNGRLHPATQYLKGLPK*KPLVNI
Trigger: AATATTCACCAAGGGTTTGCATTTGGGAAGTCCCTT...TAAATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR GCA 90 bp CCAGGTATGAACAGTATTGAGCAAGACCCACAGGGCAGCAATAATCATTTATCCATTAAAAGGAGATCATaGTTCTTACCCAGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: PGMNSIEQDPQGSNNHLSIKRRS*FLPRKW
Trigger: CCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAAT...GGATAAATGATTATTGCTGCCCTGTGGGTCTTGCTCAATACTGTTCATACCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp AGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGAGAATAAGGTCTCACATTTTGAGCAAAGCTaGTACCCAACTTTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: RGMTARASLTMDLENKVSHFEQS*YPTLPV
Trigger: AACTGGCAAAGTTGGGTACCAGCTTTGCTCAAAATG...TGAGACCTTATTCTCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CCA 90 bp AAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATTCATACATAGCAATCTaGACAGGAAATGGCATGAGG +
Preference number: 4 (lower is better)
Translates to: KYAVNCHHTMSPTKGYIHSYIAI*TGNGMR
Trigger: CCTCATGCCATTTCCTGTCCAGATTGCTATGTATGA...ATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR TCA 90 bp AGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGAGAATAAGGTCTCATCTCAAAATATGCAGTaGACTGTCACCACACTATGT +
Preference number: 4 (lower is better)
Translates to: RGMTARASLTMDLENKVSSQNMQ*TVTTLC
Trigger: ACATAGTGTGGTGACAGTTCACTGCATATTTTGAGA...TGAGACCTTATTCTCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS CCA 90 bp GGTGCATCTGAGGGTCAGCCCTCCCAGGGTACCAGCCTCGATCCCTaGGCCCGGTCCCTGCACTCCCCACCATGGTGCCACAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: GASEGQPSQGTSLDP*ARSLHSPPWCHSCS
Trigger: GCTGCAGCTGTGGCACCATGGTGGGGAGTGCAGGGACCGGGCCCAGGGATCGAGGCTGGTACCCTGGGAGGGCTGACCCTCAGATGCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459957.5
CDS GCA 90 bp GGTCCCTGCACTCCCCACCATGGTGCCACAGCTGCAGCCGCCCGCTaGTCCCATCCACATGGATCCGGTGCAGGCCCTGGGGATCACTCT +
Preference number: 5 (lower is better)
Translates to: GPCTPHHGATAAAAR*SHPHGSGAGPGDHS
Trigger: AGAGTGATCCCCAGGGCCTGCACCGGATCCATGTGGATGGGAGCAGCGGGCGGCTGCAGCTGTGGCACCATGGTGGGGAGTGCAGGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459957.5
CDS CCA 90 bp CCACCATGGTGCCACAGCTGCAGCCGCCCGCTGCTCCCATCCACATaGATCCGGTGCAGGCCCTGGGGATCACTCTCCACAAGCCGTCGA +
Preference number: 5 (lower is better)
Translates to: PPWCHSCSRPLLPST*IRCRPWGSLSTSRR
Trigger: TCGACGGCTTGTGGAGAGTGATCCCCAGGGCCTGCACCGGATCCATGTGGATGGGAGCAGCGGGCGGCTGCAGCTGTGGCACCATGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459957.5
CDS-3UTR CAA 90 bp CTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGGTGCCAGCTCAGCATGGGGACGGTGGTCCTGGGGGTaGAGCTTCAAGGCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: LRGHLREGRPEGASSAWGRWSWG*SFKAWV
Trigger: CACCCAGGCCTTGAAGCTCAACCCCCAGGACCACCG...TCCCCATGCTGAGCTGGCACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000449459.5
CDS GCA 90 bp AGTGGCCCAGGAGGTAATCATGGTGCCACAGCTGCAGCCGCCCGCTaGTCCCATCCACATGGATCCGGTGCAGGCCCTGGGGATCACTCT +
Preference number: 5 (lower is better)
Translates to: SGPGGNHGATAAAAR*SHPHGSGAGPGDHS
Trigger: AGAGTGATCCCCAGGGCCTGCACCGGATCCATGTGGATGGGAGCAGCGGGCGGCTGCAGCTGTGGCACCATGATTACCTCCTGGGCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000442235.6
ENST00000464241.5
ENST00000489152.5
CDS GCA 90 bp TGCCACAGCTGCAGCCGCCCGCTGCTCCCATCCACATGGATCCGGTaGAGGCCCTGGGGATCACTCTCCACAAGCCGTCGAAGAAAATCC +
Preference number: 5 (lower is better)
Translates to: CHSCSRPLLPSTWIR*RPWGSLSTSRRRKS
Trigger: GGATTTTCTTCGACGGCTTGTGGAGAGTGATCCCCAGGGCCTGCACCGGATCCATGTGGATGGGAGCAGCGGGCGGCTGCAGCTGTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000442235.6
ENST00000459957.5
ENST00000464241.5
ENST00000489152.5
CDS-3UTR CAA 90 bp GGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGGTAGTCCCTCAGCCCCCTaGCCCCTGTCACTCTGTCCA +
Preference number: 5 (lower is better)
Translates to: GDLKAVLRGHLREGRPEGSPSAP*PLSLCP
Trigger: TGGACAGAGTGACAGGGGCAAGGGGGCTGAGGGACT...ACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR CAA 90 bp TGGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGGAGGTAGTGCTGGCCTaGGGCTCCCCACAGTACTGC +
Preference number: 5 (lower is better)
Translates to: WRQARGPQSSASRAPEGREVVLA*GSPQYC
Trigger: GCAGTACTGTGGGGAGCCCAAGGCCAGCACTACCTC...CCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR CAA 90 bp TGGTCCTGGGGGTTGAGCTTCAAGGCCTGGGTGAAGAGGACCACGGCCTCATGGGAGGTAGTGCTGGCCTaGGGCTCCCCACAGTACTGC +
Preference number: 5 (lower is better)
Translates to: WSWGLSFKAWVKRTTASWEVVLA*GSPQYC
Trigger: GCAGTACTGTGGGGAGCCCAAGGCCAGCACTACCTC...CCATGAGGCCGTGGTCCTCTTCACCCAGGCCTTGAAGCTCAACCCCCAGGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
CDS-3UTR CAA 90 bp GGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTGAGGTAGTGCTGGCCTaGGGCTCCCCACAGTACTGC +
Preference number: 5 (lower is better)
Translates to: GDRPGDLKAVLRGHLREGEVVLA*GSPQYC
Trigger: GCAGTACTGTGGGGAGCCCAAGGCCAGCACTACCTC...ACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR CAA 90 bp GGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTTCCGCCCCACAGTCTTaGGAATCGGCGCCATCGCAT +
Preference number: 5 (lower is better)
Translates to: GDRPGDLKAVLRGHLREGSAPQS*ESAPSH
Trigger: ATGCGATGGCGCCGATTCCAAAGACTGTGGGGCGGA...ACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR CAA 90 bp CCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGTCCGCCCCACAGTCTTaGGAATCGGCGCCATCGCAT +
Preference number: 5 (lower is better)
Translates to: PGDLKAVLRGHLREGRPESAPQS*ESAPSH
Trigger: ATGCGATGGCGCCGATTCCAAAGACTGTGGGGCGGA...CTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR CAA 90 bp AGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGGGGCCTCTCCTCTCTaGGAGGGCTCTCTTCCTCTT +
Preference number: 5 (lower is better)
Translates to: RPGDLKAVLRGHLREGRPGASPL*EGSLPL
Trigger: AAGAGGAAGAGAGCCCTCCAAGAGAGGAGAGGCCCC...AGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000449459.5
CDS-3UTR CAA 90 bp GGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTGGGGCCTCTCCTCTCTaGGAGGGCTCTCTTCCTCTT +
Preference number: 5 (lower is better)
Translates to: GDRPGDLKAVLRGHLREGGASPL*EGSLPL
Trigger: AAGAGGAAGAGAGCCCTCCAAGAGAGGAGAGGCCCC...ACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000449459.5
CDS-3UTR CAA 90 bp CCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGAAGGGTCCTGGGGCTaGAGAGGATGGGGCCTTCTA +
Preference number: 5 (lower is better)
Translates to: PGDLKAVLRGHLREGRPEEGSWG*RGWGLL
Trigger: TAGAAGGCCCCATCCTCTCAAGCCCCAGGACCCTTC...CTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp CCCAGACCTATTACCTGTAGTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCCCCAGTCCCTGGGCCCCTaGTGTCCTCCTGGCAAGAGA +
Preference number: 5 (lower is better)
Translates to: PRPITCSPIKALPRRKRPQSLGP*CPPGKR
Trigger: TCTCTTGCCAGGAGGACACAAGGGGCCCAGGGACTG...GGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGACTACAGGTAATAGGTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449459.5
CDS GCA 90 bp CTGACCCAGTGTGAGGTGGAGAAGGCAAGAGCGGAGCTCTCGGGCTaGGTCAGGCTGGGACCCACCTCTCAGAGTTTCCTGAAACACAGC +
Preference number: 5 (lower is better)
Translates to: LTQCEVEKARAELSG*VRLGPTSQSFLKHS
Trigger: GCTGTGTTTCAGGAAACTCTGAGAGGTGGGTCCCAGCCTGACGCAGCCCGAGAGCTCCGCTCTTGCCTTCTCCACCTCACACTGGGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491252.5
CDS CCA 90 bp TGCAGCCGCCCGCTGCTCCCATCCACATGGATCCGGTGCAGGCCCTaGGGATCACTCTCCACAAGCCGTCGAAGAAAATCCACTATGTCC +
Preference number: 5 (lower is better)
Translates to: CSRPLLPSTWIRCRP*GSLSTSRRRKSTMS
Trigger: GGACATAGTGGATTTTCTTCGACGGCTTGTGGAGAGTGATCCCCAGGGCCTGCACCGGATCCATGTGGATGGGAGCAGCGGGCGGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000442235.6
ENST00000459957.5
ENST00000464241.5
ENST00000489152.5
CDS-3UTR CAA 90 bp GTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCCCCGGGGCCAGCCAGGCCGTATGTCACTCTGTCCAGTaGATTTCCCTTCATCATCCA +
Preference number: 5 (lower is better)
Translates to: VPSRPCPGGRGPGASQAVCHSVQ*ISLHHP
Trigger: TGGATGATGAAGGGAAATCAACTGGACAGAGTGACA...TACGGCCTGGCTGGCCCCGGGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000449459.5
CDS-3UTR CAA 90 bp GGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTTCCTCAGCCAGGCGATaGGCTTCCTCTTCTGTCACC +
Preference number: 5 (lower is better)
Translates to: GDRPGDLKAVLRGHLREGSSARR*ASSSVT
Trigger: GGTGACAGAAGAGGAAGCCAATCGCCTGGCTGAGGA...ACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR CAA 90 bp GACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGGGCCAATCCCCAACCTaGCGCAAAGCCAGAGACACA +
Preference number: 5 (lower is better)
Translates to: DRPGDLKAVLRGHLREGRGQSPT*RKARDT
Trigger: TGTGTCTCTGGCTTTGCGCAAGGTTGGGGATTGGCC...CCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR CAA 90 bp GGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGGCTCTCTTCCTCTaGACCCATCTTCTGGAGGGC +
Preference number: 5 (lower is better)
Translates to: GDRPGDLKAVLRGHLREGRALFL*THLLEG
Trigger: GCCCTCCAGAAGATGGGTCAAGAGGAAGAGAGCCCT...ACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR CAA 90 bp TGGGGTGGCTTCGGTGACATGAAGGATAATGCAAGAGTGGAGACAGGCCAGGGGAGTCCCATCAAGGCCTaGCCCAGGCGGAAGAGGCCC +
Preference number: 5 (lower is better)
Translates to: WGGFGDMKDNARVETGQGSPIKA*PRRKRP
Trigger: GGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGACT...CCCCTGGCCTGTCTCCACTCTTGCATTATCCTTCATGTCACCGAAGCCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp AGGGATATATACATGGCCCTGCCCTATGAGGGACCGGTGCCCCCTCATCTGGCCGAAGGGTCCTGGGGCTaGAGAGGATGGGGCCTTCTA +
Preference number: 5 (lower is better)
Translates to: RDIYMALPYEGPVPPHLAEGSWG*RGWGLL
Trigger: TAGAAGGCCCCATCCTCTCAAGCCCCAGGACCCTTC...GGCCAGATGAGGGGGCACCGGTCCCTCATAGGGCAGGGCCATGTATATATCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
CDS CCA 90 bp GGTGGGGTGAGGACGGAGAGAGAAAGGATCTCACTTGCCAGTTCCTaGCTCTGTTGTAAGGCAGCTGCCAGCAGTCCCGGAGATGCCTGG +
Preference number: 5 (lower is better)
Translates to: GGVRTERERISLASS*LCCKAAASSPGDAW
Trigger: CCAGGCATCTCCGGGACTGCTGGCAGCTGCCTTACAACAGAGCCAGGAACTGGCAAGTGAGATCCTTTCTCTCTCCGTCCTCACCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491252.5
CDS-3UTR CAA 90 bp CTGGTACCCAACTTTGCCAGTTCCTGGCTCTGTTGTAAGGCAGCTGCCAGCAGTCGGTGGTCCTGGGGGTaGAGCTTCAAGGCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: LVPNFASSWLCCKAAASSRWSWG*SFKAWV
Trigger: CACCCAGGCCTTGAAGCTCAACCCCCAGGACCACCG...ACTGCTGGCAGCTGCCTTACAACAGAGCCAGGAACTGGCAAAGTTGGGTACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
CDS-3UTR CAA 90 bp TGTAGTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGCCCCGGGGCCAGCCAGGCCCCAAATGCAAACCCTaGGTGAATATTCTAGCAGTG +
Preference number: 5 (lower is better)
Translates to: CSPIKALPRRKRPRGQPGPKCKP*VNILAV
Trigger: CACTGCTAGAATATTCACCAAGGGTTTGCATTTGGG...GCCTGGCTGGCCCCGGGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGACTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp ACTTTGCCAGTTCCTGGCTCTGTTGTAAGGCAGCTGCCAGCAGTCCCGGAGATGGTCCCGGAGATGCCTTaGGACTCTGCTGGGGCCTCT +
Preference number: 5 (lower is better)
Translates to: TLPVPGSVVRQLPAVPEMVPEMP*DSAGAS
Trigger: AGAGGCCCCAGCAGAGTCCAAAGGCATCTCCGGGAC...CATCTCCGGGACTGCTGGCAGCTGCCTTACAACAGAGCCAGGAACTGGCAAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
CDS GCA 90 bp GGGTCGCTTTTACCTCTTCGCCGTAATCCTCTGGACCGAATTCCTTaGAAAGTTTGGGTGCAGCAGCGACCTCCAGTGGGCAGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: GSLLPLRRNPLDRIP*KVWVQQRPPVGSWA
Trigger: GGCCCAGCTGCCCACTGGAGGTCGCTGCTGCACCCAAACTTTGCAAGGAATTCGGTCCAGAGGATTACGGCGAAGAGGTAAAAGCGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463189.1
ENST00000463704.5
CDS CCA 90 bp TGTCCTCTTCGCCGTAATCCTCTGGACCGAATTCCTTGCAAAGTTTaGGTGCAGCAGCGACCTCCAGTGGGCAGCTGGGCCGTAGAGAGC +
Preference number: 5 (lower is better)
Translates to: CPLRRNPLDRIPCKV*VQQRPPVGSWAVES
Trigger: GCTCTCTACGGCCCAGCTGCCCACTGGAGGTCGCTGCTGCACCCAAACTTTGCAAGGAATTCGGTCCAGAGGATTACGGCGAAGAGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000442235.6
ENST00000459957.5
ENST00000464241.5
ENST00000489152.5
CDS CCA 90 bp CTCCTGAGAATCTCACCTCTTCTGTCACCAGGAGCTTCTGGGGCATaGCCACCTGAAGCAGGCTGTCTGAGACACTGGGGAAGGTGGCAG +
Preference number: 5 (lower is better)
Translates to: LLRISPLLSPGASGA*PPEAGCLRHWGRWQ
Trigger: CTGCCACCTTCCCCAGTGTCTCAGACAGCCTGCTTCAGGTGGCCATGCCCCAGAAGCTCCTGGTGACAGAAGAGGTGAGATTCTCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489152.5
ENST00000491252.5
CDS CCA 90 bp GGTGGGGTGAGGACGGAGAGAGAAAGGATCTCACTTGCCAGTTCCTaGCTCTGTTGTAAGGCAGCTGCCAGCAGTCCCGGAGATGCCTGT +
Preference number: 5 (lower is better)
Translates to: GGVRTERERISLASS*LCCKAAASSPGDAC
Trigger: ACAGGCATCTCCGGGACTGCTGGCAGCTGCCTTACAACAGAGCCAGGAACTGGCAAGTGAGATCCTTTCTCTCTCCGTCCTCACCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489152.5
CDS CCA 90 bp GGCCTGACTGTAGGTCTCTTGACCCTAGAGCCAGAGAACTCCCACTaGACCCTGTGTCAATCCTTAGACCCTGTGCCTCCCCAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: GLTVGLLTLEPENSH*TLCQSLDPVPPQQL
Trigger: GAGCTGCTGGGGAGGCACAGGGTCTAAGGATTGACACAGGGTCCAGTGGGAGTTCTCTGGCTCTAGGGTCAAGAGACCTACAGTCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491252.5
CDS-3UTR CAA 90 bp GGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGAGAGCAGTCTAGCTaGATCCGCCCCACAGTCTTT +
Preference number: 5 (lower is better)
Translates to: GDRPGDLKAVLRGHLREGREQSS*IRPTVF
Trigger: AAAGACTGTGGGGCGGATCAAGCTAGACTGCTCTCT...ACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR CAA 90 bp GACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGAGAGAGCAGTCTAGCTaGATCCGCCCCACAGTCTTT +
Preference number: 5 (lower is better)
Translates to: DRPGDLKAVLRGHLREGRREQSS*IRPTVF
Trigger: AAAGACTGTGGGGCGGATCAAGCTAGACTGCTCTCT...CCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR CAA 90 bp AGCCCCAGACCTATTACCTGTAGTCCCATCAAGGCCTTGCCCAGGCGGAAGAGGGGCCAATCCCCAACCTaGCGCAAAGCCAGAGACACA +
Preference number: 5 (lower is better)
Translates to: SPRPITCSPIKALPRRKRGQSPT*RKARDT
Trigger: TGTGTCTCTGGCTTTGCGCAAGGTTGGGGATTGGCC...CCTCTTCCGCCTGGGCAAGGCCTTGATGGGACTACAGGTAATAGGTCTGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR CAA 90 bp GACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGAGCTGGTACCCAACTTaGCCAGTTCCTGGCTCTGTT +
Preference number: 5 (lower is better)
Translates to: DRPGDLKAVLRGHLREGRSWYPT*PVPGSV
Trigger: AACAGAGCCAGGAACTGGCAAAGTTGGGTACCAGCT...CCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000449459.5
CDS CCA 90 bp TTACCTCTTCGCCGTAATCCTCTGGACCGAATTCCTTGCAAAGTTTaGGTGCAGCAGCGACCTCCAGTGGGCAGCTGGGCCGTAGAGAGC +
Preference number: 5 (lower is better)
Translates to: LPLRRNPLDRIPCKV*VQQRPPVGSWAVES
Trigger: GCTCTCTACGGCCCAGCTGCCCACTGGAGGTCGCTGCTGCACCCAAACTTTGCAAGGAATTCGGTCCAGAGGATTACGGCGAAGAGGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463189.1
ENST00000463704.5
CDS-3UTR CAA 90 bp AGTGGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAAATTCCTTGCAAAGTTaGGGTGCAGCAGCGACCTCC +
Preference number: 5 (lower is better)
Translates to: SGDRPGDLKAVLRGHLRENSLQS*GAAATS
Trigger: GGAGGTCGCTGCTGCACCCAAACTTTGCAAGGAATT...TTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR CAA 90 bp GGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGGTTCTGGACCGAATTCCTaGCAAAGTTTGGGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: GDLKAVLRGHLREGRPEGSGPNS*QSLGAA
Trigger: TGCTGCACCCAAACTTTGCAAGGAATTCGGTCCAGA...ACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR CAA 90 bp GGAGACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTTCTGGACCGAATTCCTaGCAAAGTTTGGGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: GDRPGDLKAVLRGHLREGSGPNS*QSLGAA
Trigger: TGCTGCACCCAAACTTTGCAAGGAATTCGGTCCAGA...ACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR CAA 90 bp ACTTTGCCAGTTCCTGGCTCTGTTGTAAGGCAGCTGCCAGCAGTCCCGGAGATGTCCTCAGCCAGGCGATaGGCTTCCTCTTCTGTCACC +
Preference number: 5 (lower is better)
Translates to: TLPVPGSVVRQLPAVPEMSSARR*ASSSVT
Trigger: GGTGACAGAAGAGGAAGCCAATCGCCTGGCTGAGGA...CATCTCCGGGACTGCTGGCAGCTGCCTTACAACAGAGCCAGGAACTGGCAAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
CDS-3UTR CAA 90 bp CTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTGAGGGTGCCAGCTCGCTTCCGTTCCTTTaGACGCTTCTTCTTGAGTCG +
Preference number: 5 (lower is better)
Translates to: LKAVLRGHLREGRPEGASSLPFL*TLLLES
Trigger: CGACTCAAGAAGAAGCGTCAAAAGGAACGGAAGCGA...GCTGGCACCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
CDS-3UTR CAA 90 bp GCTGAGGCCCCATTCAGCGGGAGAGCCACCAGTTGGGAGTGTGGACATGTATGGAGCTGGTACCCAACTTaGCCAGTTCCTGGCTCTGTT +
Preference number: 5 (lower is better)
Translates to: AEAPFSGRATSWECGHVWSWYPT*PVPGSV
Trigger: AACAGAGCCAGGAACTGGCAAAGTTGGGTACCAGCT...CCATACATGTCCACACTCCCAACTGGTGGCTCTCCCGCTGAATGGGGCCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS GCA 90 bp AATCCACTATGTCCTCTTCGCCGTAATCCTCTGGACCGAATTCCTTaGAAAGTTTGGGTGCAGCAGCGACCTCCAGTGGGCAGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: NPLCPLRRNPLDRIP*KVWVQQRPPVGSWA
Trigger: GGCCCAGCTGCCCACTGGAGGTCGCTGCTGCACCCAAACTTTGCAAGGAATTCGGTCCAGAGGATTACGGCGAAGAGGACATAGTGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000442235.6
ENST00000459957.5
ENST00000464241.5
ENST00000489152.5
CDS-3UTR CAA 90 bp CCCACAGTACTGCTCCAAACGCTCCTGTCGCTTCCGTTCCTTTTGACGCTGCAAAGGGCTCTCTTCCTCTaGACCCATCTTCTGGAGGGC +
Preference number: 5 (lower is better)
Translates to: PTVLLQTLLSLPFLLTLQRALFL*THLLEG
Trigger: GCCCTCCAGAAGATGGGTCAAGAGGAAGAGAGCCCT...TTGCAGCGTCAAAAGGAACGGAAGCGACAGGAGCGTTTGGAGCAGTACTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449459.5
CDS-3UTR CAA 90 bp TCTCTCCTGTTTCCAGCCCCAGACCTATTACCTGTAGTCCCATCAAGGCCTTGCGGGGCCTCTCCTCTCTaGGAGGGCTCTCTTCCTCTT +
Preference number: 5 (lower is better)
Translates to: SLLFPAPDLLPVVPSRPCGASPL*EGSLPL
Trigger: AAGAGGAAGAGAGCCCTCCAAGAGAGGAGAGGCCCC...GCAAGGCCTTGATGGGACTACAGGTAATAGGTCTGGGGCTGGAAACAGGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS CCA 90 bp CTGGGGGAAACTGAGGGTCGCTTTTACCTCTTCGCCGTAATCCTCTaGACCGAATTCCTTGCAAAGTTTGGGTGCAGCAGCGACCTCCAG +
Preference number: 5 (lower is better)
Translates to: LGETEGRFYLFAVIL*TEFLAKFGCSSDLQ
Trigger: CTGGAGGTCGCTGCTGCACCCAAACTTTGCAAGGAATTCGGTCCAGAGGATTACGGCGAAGAGGTAAAAGCGACCCTCAGTTTCCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463189.1
ENST00000463704.5
CDS-3UTR CAA 90 bp TGGGGTGGCTTCGGTGACATGAAGGATAATGCAAGAGTGGAGACAGGCCAGGGGAATTCCTTGCAAAGTTaGGGTGCAGCAGCGACCTCC +
Preference number: 5 (lower is better)
Translates to: WGGFGDMKDNARVETGQGNSLQS*GAAATS
Trigger: GGAGGTCGCTGCTGCACCCAAACTTTGCAAGGAATT...CCCCTGGCCTGTCTCCACTCTTGCATTATCCTTCATGTCACCGAAGCCACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp TCCAGCCCCAGACCTATTACCTGTAGTCCCATCAAGGCCTTGCCCAGGCGGAAGTCTGGACCGAATTCCTaGCAAAGTTTGGGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: SSPRPITCSPIKALPRRKSGPNS*QSLGAA
Trigger: TGCTGCACCCAAACTTTGCAAGGAATTCGGTCCAGA...CTTCCGCCTGGGCAAGGCCTTGATGGGACTACAGGTAATAGGTCTGGGGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR CAA 90 bp TGGTCCTGGGGGTTGAGCTTCAAGGCCTGGGTGAAGAGGACCACGGCCTCATGGTGTCACTCTGTCCAGTaGATTTCCCTTCATCATCCA +
Preference number: 5 (lower is better)
Translates to: WSWGLSFKAWVKRTTASWCHSVQ*ISLHHP
Trigger: TGGATGATGAAGGGAAATCAACTGGACAGAGTGACA...CCATGAGGCCGTGGTCCTCTTCACCCAGGCCTTGAAGCTCAACCCCCAGGACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
CDS-3UTR CAA 90 bp AGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGCCTTGTCACTCTGTCCAGTaGATTTCCCTTCATCATCCA +
Preference number: 5 (lower is better)
Translates to: RPGDLKAVLRGHLREGRPCHSVQ*ISLHHP
Trigger: TGGATGATGAAGGGAAATCAACTGGACAGAGTGACA...AGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR CAA 90 bp GACAGGCCAGGGGACCTCAAAGCAGTGCTTCGAGGGCACCTGAGGGAAGGTAGGTGTCACTCTGTCCAGTaGATTTCCCTTCATCATCCA +
Preference number: 5 (lower is better)
Translates to: DRPGDLKAVLRGHLREGRCHSVQ*ISLHHP
Trigger: TGGATGATGAAGGGAAATCAACTGGACAGAGTGACA...CCTACCTTCCCTCAGGTGCCCTCGAAGCACTGCTTTGAGGTCCCCTGGCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
CDS-3UTR CAA 90 bp ACTGCTCCAAACGCTCCTGTCGCTTCCGTTCCTTTTGACGCTGCAATAGTAATGTCCGCCCCACAGTCTTaGGAATCGGCGCCATCGCAT +
Preference number: 5 (lower is better)
Translates to: TAPNAPVASVPFDAAIVMSAPQS*ESAPSH
Trigger: ATGCGATGGCGCCGATTCCAAAGACTGTGGGGCGGA...CATTACTATTGCAGCGTCAAAAGGAACGGAAGCGACAGGAGCGTTTGGAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449459.5
CDS-3UTR CAA 90 bp AGTGGATGTGGGGCTCCTTTCTCTCATCAGAAGCTTCCCCATGGCAAGAGGAATTCCTCAGCCAGGCGATaGGCTTCCTCTTCTGTCACC +
Preference number: 5 (lower is better)
Translates to: SGCGAPFSHQKLPHGKRNSSARR*ASSSVT
Trigger: GGTGACAGAAGAGGAAGCCAATCGCCTGGCTGAGGA...ATTCCTCTTGCCATGGGGAAGCTTCTGATGAGAGAAAGGAGCCCCACATCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp GTGAATATTCTAGCAGTGAGAGGAGGTGAGCACCAGACCACTGGACAAGAGAGGGGCCAATCCCCAACCTaGCGCAAAGCCAGAGACACA +
Preference number: 5 (lower is better)
Translates to: VNILAVRGGEHQTTGQERGQSPT*RKARDT
Trigger: TGTGTCTCTGGCTTTGCGCAAGGTTGGGGATTGGCC...CCTCTCTTGTCCAGTGGTCTGGTGCTCACCTCCTCTCACTGCTAGAATATTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp TGGACAAGAGAGGTCAGAGTCATACATAGCAATCTGGACAGGAAATGGCATGAGAGTCCCATCAAGGCCTaGCCCAGGCGGAAGAGGCCC +
Preference number: 5 (lower is better)
Translates to: WTREVRVIHSNLDRKWHESPIKA*PRRKRP
Trigger: GGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGACT...CTCATGCCATTTCCTGTCCAGATTGCTATGTATGACTCTGACCTCTCTTGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp ATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATGGAGTCCCATCAAGGCCTaGCCCAGGCGGAAGAGGCCC +
Preference number: 5 (lower is better)
Translates to: ICSELSPHYVPHQGIYTWSPIKA*PRRKRP
Trigger: GGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGACT...CCATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR CAA 90 bp CCTTTCTCTCATCAGAAGCTTCCCCATGGCAAGAGGAATGACTGCCAGGGCATCAGAGAGCAGTCTAGCTaGATCCGCCCCACAGTCTTT +
Preference number: 5 (lower is better)
Translates to: PFSHQKLPHGKRNDCQGIREQSS*IRPTVF
Trigger: AAAGACTGTGGGGCGGATCAAGCTAGACTGCTCTCT...GATGCCCTGGCAGTCATTCCTCTTGCCATGGGGAAGCTTCTGATGAGAGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp AGGAACCAGCTAGGGGAAGCTGCCAGGATCTTAGACGTGAAATTAAAAGGAGATAGTCCCTCAGCCCCCTaGCCCCTGTCACTCTGTCCA +
Preference number: 5 (lower is better)
Translates to: RNQLGEAARILDVKLKGDSPSAP*PLSLCP
Trigger: TGGACAGAGTGACAGGGGCAAGGGGGCTGAGGGACT...ATCTCCTTTTAATTTCACGTCTAAGATCCTGGCAGCTTCCCCTAGCTGGTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp CACCAGACCACTGGACAAGAGAGGTCAGAGTCATACATAGCAATCTGGACAGGAAGGGCTCTCTTCCTCTaGACCCATCTTCTGGAGGGC +
Preference number: 5 (lower is better)
Translates to: HQTTGQERSESYIAIWTGRALFL*THLLEG
Trigger: GCCCTCCAGAAGATGGGTCAAGAGGAAGAGAGCCCT...TCCTGTCCAGATTGCTATGTATGACTCTGACCTCTCTTGTCCAGTGGTCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp TTAACATGGGGAAAGGCTAATTACCATGCCCAGTGCTGGGGTGGAGAAACAGAGGAGATGCCTGTACCTTaGGACTCTGCTGGGGCCTCT +
Preference number: 5 (lower is better)
Translates to: LTWGKANYHAQCWGGETEEMPVP*DSAGAS
Trigger: AGAGGCCCCAGCAGAGTCCAAAGGTACAGGCATCTC...CTCTGTTTCTCCACCCCAGCACTGGGCATGGTAATTAGCCTTTCCCCATGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000233623.11
ENST00000410003.5
CDS-3UTR CAA 90 bp ATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATGGTCCGCCCCACAGTCTTaGGAATCGGCGCCATCGCAT +
Preference number: 5 (lower is better)
Translates to: ICSELSPHYVPHQGIYTWSAPQS*ESAPSH
Trigger: ATGCGATGGCGCCGATTCCAAAGACTGTGGGGCGGA...CCATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp ATGGTAGAAACCATTTTGAGCAAAGCTGGTACCCAACTTTGCCAGTTCCTGGCTTCCGCCCCACAGTCTTaGGAATCGGCGCCATCGCAT +
Preference number: 5 (lower is better)
Translates to: MVETILSKAGTQLCQFLASAPQS*ESAPSH
Trigger: ATGCGATGGCGCCGATTCCAAAGACTGTGGGGCGGA...AGCCAGGAACTGGCAAAGTTGGGTACCAGCTTTGCTCAAAATGGTTTCTACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424122.5
ENST00000449459.5
CDS-3UTR CAA 90 bp GAACGATTTCCAAATAACCTGATAAAGACAGAAGGTGGCCAAAGGTCTGAGTCCAGTCCCTCAGCCCCCTaGCCCCTGTCACTCTGTCCA +
Preference number: 5 (lower is better)
Translates to: ERFPNNLIKTEGGQRSESSPSAP*PLSLCP
Trigger: TGGACAGAGTGACAGGGGCAAGGGGGCTGAGGGACT...GGACTCAGACCTTTGGCCACCTTCTGTCTTTATCAGGTTATTTGGAAATCGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR CAA 90 bp AATATCCCTTATGAGGTAGGGACTACCCTCATTTTTACAGGTGAGGGAACTGAGGAGGTAGTGCTGGCCTaGGGCTCCCCACAGTACTGC +
Preference number: 5 (lower is better)
Translates to: NIPYEVGTTLIFTGEGTEEVVLA*GSPQYC
Trigger: GCAGTACTGTGGGGAGCCCAAGGCCAGCACTACCTC...CTCAGTTCCCTCACCTGTAAAAATGAGGGTAGTCCCTACCTCATAAGGGATATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp CAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATTTAAGGGGGGCCTCTCCTCTCTaGGAGGGCTCTCTTCCTCTT +
Preference number: 5 (lower is better)
Translates to: QGDPAGNGRLHPATQYLRGASPL*EGSLPL
Trigger: AAGAGGAAGAGAGCCCTCCAAGAGAGGAGAGGCCCC...CCTTAAATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp ATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATGGGGGGCCTCTCCTCTCTaGGAGGGCTCTCTTCCTCTT +
Preference number: 5 (lower is better)
Translates to: ICSELSPHYVPHQGIYTWGASPL*EGSLPL
Trigger: AAGAGGAAGAGAGCCCTCCAAGAGAGGAGAGGCCCC...CCATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATAT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR CAA 90 bp AGAGGAGGTGAGCACCAGACCACTGGACAAGAGAGGTCAGAGTCATACATAGCAAGCTGGTACCCAACTTaGCCAGTTCCTGGCTCTGTT +
Preference number: 5 (lower is better)
Translates to: RGGEHQTTGQERSESYIASWYPT*PVPGSV
Trigger: AACAGAGCCAGGAACTGGCAAAGTTGGGTACCAGCT...TGCTATGTATGACTCTGACCTCTCTTGTCCAGTGGTCTGGTGCTCACCTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp GCTTTCCATCCTCACAATATCCCTTATGAGGTAGGGACTACCCTCATTTTTACACGGTGGTCCTGGGGGTaGAGCTTCAAGGCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: AFHPHNIPYEVGTTLIFTRWSWG*SFKAWV
Trigger: CACCCAGGCCTTGAAGCTCAACCCCCAGGACCACCG...TGTAAAAATGAGGGTAGTCCCTACCTCATAAGGGATATTGTGAGGATGGAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp TCAAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACGGTGGTCCTGGGGGTaGAGCTTCAAGGCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: SKYAVNCHHTMSPTKGYIRWSWG*SFKAWV
Trigger: CACCCAGGCCTTGAAGCTCAACCCCCAGGACCACCG...TATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR CAA 90 bp AAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACACGGTGGTCCTGGGGGTaGAGCTTCAAGGCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: KICSELSPHYVPHQGIYTRWSWG*SFKAWV
Trigger: CACCCAGGCCTTGAAGCTCAACCCCCAGGACCACCG...TGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR CAA 90 bp ATTAAAAGGAGATCATGCTTCTTACCCAGGAAGTGGGGAATTCAGTTGACCCTTAGTCCCATCAAGGCCTaGCCCAGGCGGAAGAGGCCC +
Preference number: 5 (lower is better)
Translates to: IKRRSCFLPRKWGIQLTLSPIKA*PRRKRP
Trigger: GGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGACT...AAGGGTCAACTGAATTCCCCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp AGTGGATGTGGGGCTCCTTTCTCTCATCAGAAGCTTCCCCATGGCAAGAGGAATTCTGGACCGAATTCCTaGCAAAGTTTGGGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: SGCGAPFSHQKLPHGKRNSGPNS*QSLGAA
Trigger: TGCTGCACCCAAACTTTGCAAGGAATTCGGTCCAGA...ATTCCTCTTGCCATGGGGAAGCTTCTGATGAGAGAAAGGAGCCCCACATCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp AAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATAGTCCCTCAGCCCCCTaGCCCCTGTCACTCTGTCCA +
Preference number: 5 (lower is better)
Translates to: KYAVNCHHTMSPTKGYIHSPSAP*PLSLCP
Trigger: TGGACAGAGTGACAGGGGCAAGGGGGCTGAGGGACT...ATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp ATGTTTCAATACCTTCTCTCTCCAGGTATGAACAGTATTGAGCAAGACCCACAGAGTCCCTCAGCCCCCTaGCCCCTGTCACTCTGTCCA +
Preference number: 5 (lower is better)
Translates to: MFQYLLSPGMNSIEQDPQSPSAP*PLSLCP
Trigger: TGGACAGAGTGACAGGGGCAAGGGGGCTGAGGGACT...CTGTGGGTCTTGCTCAATACTGTTCATACCTGGAGAGAGAAGGTATTGAAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp CAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATTTAAGGTCCTCAGCCAGGCGATaGGCTTCCTCTTCTGTCACC +
Preference number: 5 (lower is better)
Translates to: QGDPAGNGRLHPATQYLRSSARR*ASSSVT
Trigger: GGTGACAGAAGAGGAAGCCAATCGCCTGGCTGAGGA...CCTTAAATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp CAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATTTAAGGGGCCAATCCCCAACCTaGCGCAAAGCCAGAGACACA +
Preference number: 5 (lower is better)
Translates to: QGDPAGNGRLHPATQYLRGQSPT*RKARDT
Trigger: TGTGTCTCTGGCTTTGCGCAAGGTTGGGGATTGGCC...CCTTAAATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp GCAGCTGCCTCTCTGAAGCGCTTTGGTCCCAGAGGGATCAGAAAGAAAAGATTAAGCTGGTACCCAACTTaGCCAGTTCCTGGCTCTGTT +
Preference number: 5 (lower is better)
Translates to: AAASLKRFGPRGIRKKRLSWYPT*PVPGSV
Trigger: AACAGAGCCAGGAACTGGCAAAGTTGGGTACCAGCT...TAATCTTTTCTTTCTGATCCCTCTGGGACCAAAGCGCTTCAGAGAGGCAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR CAA 90 bp TTCCTGAAACACAGCAGCTGCCTCTCTGAAGCGCTTTGGTCCCAGAGGGATCAGCCCAAATGCAAACCCTaGGTGAATATTCTAGCAGTG +
Preference number: 5 (lower is better)
Translates to: FLKHSSCLSEALWSQRDQPKCKP*VNILAV
Trigger: CACTGCTAGAATATTCACCAAGGGTTTGCATTTGGG...CTGATCCCTCTGGGACCAAAGCGCTTCAGAGAGGCAGCTGCTGTGTTTCAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410003.5
CDS-3UTR CAA 90 bp CGTGAAATTAAAAGGAGATCATGCTTCTTACCCAGGAAGTGGGGAATTCAGTTGGTCCCGGAGATGCCTTaGGACTCTGCTGGGGCCTCT +
Preference number: 5 (lower is better)
Translates to: REIKRRSCFLPRKWGIQLVPEMP*DSAGAS
Trigger: AGAGGCCCCAGCAGAGTCCAAAGGCATCTCCGGGAC...CAACTGAATTCCCCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAATTTCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424122.5
CDS-3UTR CAA 90 bp GGACTTCCCAAATGCAAACCCTTGGTGAATATTCTAGCAGTGAGAGGAGGTGAGAGAGAGCAGTCTAGCTaGATCCGCCCCACAGTCTTT +
Preference number: 5 (lower is better)
Translates to: GLPKCKPLVNILAVRGGEREQSS*IRPTVF
Trigger: AAAGACTGTGGGGCGGATCAAGCTAGACTGCTCTCT...CTCACCTCCTCTCACTGCTAGAATATTCACCAAGGGTTTGCATTTGGGAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp CATTGTGACACTTTGGTACTAGAAGCTTATCTAGAAAGTCAACATAGACCCTCTAGTCCCATCAAGGCCTaGCCCAGGCGGAAGAGGCCC +
Preference number: 5 (lower is better)
Translates to: HCDTLVLEAYLESQHRPSSPIKA*PRRKRP
Trigger: GGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGACT...AGAGGGTCTATGTTGACTTTCTAGATAAGCTTCTAGTACCAAAGTGTCACAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR CAA 90 bp ATGTTTCAATACCTTCTCTCTCCAGGTATGAACAGTATTGAGCAAGACCCACAGGAAGGGTCCTGGGGCTaGAGAGGATGGGGCCTTCTA +
Preference number: 5 (lower is better)
Translates to: MFQYLLSPGMNSIEQDPQEGSWG*RGWGLL
Trigger: TAGAAGGCCCCATCCTCTCAAGCCCCAGGACCCTTC...CTGTGGGTCTTGCTCAATACTGTTCATACCTGGAGAGAGAAGGTATTGAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp AAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATGAAGGGTCCTGGGGCTaGAGAGGATGGGGCCTTCTA +
Preference number: 5 (lower is better)
Translates to: KYAVNCHHTMSPTKGYIHEGSWG*RGWGLL
Trigger: TAGAAGGCCCCATCCTCTCAAGCCCCAGGACCCTTC...ATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR CAA 90 bp TCCAGCCCCAGACCTATTACCTGTAGTCCCATCAAGGCCTTGCCCAGGCGGAAGAACCATTGTGACACTTaGGTACTAGAAGCTTATCTA +
Preference number: 5 (lower is better)
Translates to: SSPRPITCSPIKALPRRKNHCDT*VLEAYL
Trigger: TAGATAAGCTTCTAGTACCAAAGTGTCACAATGGTT...CTTCCGCCTGGGCAAGGCCTTGATGGGACTACAGGTAATAGGTCTGGGGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR CAA 90 bp ACAGCAGCTGCCTCTCTGAAGCGCTTTGGTCCCAGAGGGATCAGAAAGAAAAGACTAGCCACCTTCTTCTaGAGTCGCTTTTTCTCTGCT +
Preference number: 5 (lower is better)
Translates to: TAAASLKRFGPRGIRKKRLATFF*SRFFSA
Trigger: AGCAGAGAAAAAGCGACTCAAGAAGAAGGTGGCTAG...TCTTTTCTTTCTGATCCCTCTGGGACCAAAGCGCTTCAGAGAGGCAGCTGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449459.5
CDS GCA 90 bp GGAACTCGTACCCACTCCCTAATCCTCAACTCAGAGACCCTTGTCTaGTCAATTCTACCCACTTCGAGCATCTGTTACATCAGGATCATC +
Preference number: 5 (lower is better)
Translates to: GTRTHSLILNSETLV*SILPTSSICYIRII
Trigger: GATGATCCTGATGTAACAGATGCTCGAAGTGGGTAGAATTGAGCAGACAAGGGTCTCTGAGTTGAGGATTAGGGAGTGGGTACGAGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463704.5
CDS-3UTR CAA 90 bp CAAGGTGACCCAGCTGGTAATGGTAGACTTCATCCTGCTACACAGTATTTAAGGAATTCCTTGCAAAGTTaGGGTGCAGCAGCGACCTCC +
Preference number: 5 (lower is better)
Translates to: QGDPAGNGRLHPATQYLRNSLQS*GAAATS
Trigger: GGAGGTCGCTGCTGCACCCAAACTTTGCAAGGAATT...CCTTAAATACTGTGTAGCAGGATGAAGTCTACCATTACCAGCTGGGTCACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp CTTCCCCATGGCAAGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGATCGCTTCCGTTCCTTTaGACGCTTCTTCTTGAGTCG +
Preference number: 5 (lower is better)
Translates to: LPHGKRNDCQGIINYGSRSLPFL*TLLLES
Trigger: CGACTCAAGAAGAAGCGTCAAAAGGAACGGAAGCGA...TCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCTTGCCATGGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp AGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGAGAATAAGGTCTCAAGGGCTCTCTTCCTCTaGACCCATCTTCTGGAGGGC +
Preference number: 5 (lower is better)
Translates to: RGMTARASLTMDLENKVSRALFL*THLLEG
Trigger: GCCCTCCAGAAGATGGGTCAAGAGGAAGAGAGCCCT...TGAGACCTTATTCTCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp TCAAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATAAGGGCTCTCTTCCTCTaGACCCATCTTCTGGAGGGC +
Preference number: 5 (lower is better)
Translates to: SKYAVNCHHTMSPTKGYIRALFL*THLLEG
Trigger: GCCCTCCAGAAGATGGGTCAAGAGGAAGAGAGCCCT...TATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR CAA 90 bp AAAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACAGAGATGCCTGTACCTTaGGACTCTGCTGGGGCCTCT +
Preference number: 5 (lower is better)
Translates to: KICSELSPHYVPHQGIYTEMPVP*DSAGAS
Trigger: AGAGGCCCCAGCAGAGTCCAAAGGTACAGGCATCTC...TGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
CDS-3UTR CAA 90 bp GCAAGAGGAATGACTGCCAGGGCATCATTAACTATGGATCTAGAGAATAAGGTCAATTCCTTGCAAAGTTaGGGTGCAGCAGCGACCTCC +
Preference number: 5 (lower is better)
Translates to: ARGMTARASLTMDLENKVNSLQS*GAAATS
Trigger: GGAGGTCGCTGCTGCACCCAAACTTTGCAAGGAATT...GACCTTATTCTCTAGATCCATAGTTAATGATGCCCTGGCAGTCATTCCTCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp GAACGATTTCCAAATAACCTGATAAAGACAGAAGGTGGCCAAAGGTCTGAGTCCAATTCCTTGCAAAGTTaGGGTGCAGCAGCGACCTCC +
Preference number: 5 (lower is better)
Translates to: ERFPNNLIKTEGGQRSESNSLQS*GAAATS
Trigger: GGAGGTCGCTGCTGCACCCAAACTTTGCAAGGAATT...GGACTCAGACCTTTGGCCACCTTCTGTCTTTATCAGGTTATTTGGAAATCGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000410003.5
ENST00000449459.5
CDS-3UTR CAA 90 bp ATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATGGTCTGGACCGAATTCCTaGCAAAGTTTGGGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: ICSELSPHYVPHQGIYTWSGPNS*QSLGAA
Trigger: TGCTGCACCCAAACTTTGCAAGGAATTCGGTCCAGA...CCATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp AAGGGACTTCCCAAATGCAAACCCTTGGTGAATATTCTAGCAGTGAGAGGAGGTTCGCTTCCGTTCCTTTaGACGCTTCTTCTTGAGTCG +
Preference number: 5 (lower is better)
Translates to: KGLPKCKPLVNILAVRGGSLPFL*TLLLES
Trigger: CGACTCAAGAAGAAGCGTCAAAAGGAACGGAAGCGA...ACCTCCTCTCACTGCTAGAATATTCACCAAGGGTTTGCATTTGGGAAGTCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp CTTAGACGTGAAATTAAAAGGAGATCATGCTTCTTACCCAGGAAGTGGGGAATTGGCCAATCCCCAACCTaGCGCAAAGCCAGAGACACA +
Preference number: 5 (lower is better)
Translates to: LRREIKRRSCFLPRKWGIGQSPT*RKARDT
Trigger: TGTGTCTCTGGCTTTGCGCAAGGTTGGGGATTGGCC...AATTCCCCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAATTTCACGTCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp AGTGGATGTGGGGCTCCTTTCTCTCATCAGAAGCTTCCCCATGGCAAGAGGAATTCTATAGTTCCCTTCTaGAGCCTTGGTGGGTTTTAT +
Preference number: 5 (lower is better)
Translates to: SGCGAPFSHQKLPHGKRNSIVPF*SLGGFY
Trigger: ATAAAACCCACCAAGGCTCAAGAAGGGAACTATAGA...ATTCCTCTTGCCATGGGGAAGCTTCTGATGAGAGAAAGGAGCCCCACATCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp CAAGAGAGGTCAGAGTCATACATAGCAATCTGGACAGGAAATGGCATGAGGAGCCTATGTACCAGGCACTaGGGAGGTATTTTCTCACAC +
Preference number: 5 (lower is better)
Translates to: QERSESYIAIWTGNGMRSLCTRH*GGIFSH
Trigger: GTGTGAGAAAATACCTCCCAAGTGCCTGGTACATAG...GCTCCTCATGCCATTTCCTGTCCAGATTGCTATGTATGACTCTGACCTCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp AAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATAGCTGGTACCCAACTTaGCCAGTTCCTGGCTCTGTT +
Preference number: 5 (lower is better)
Translates to: KYAVNCHHTMSPTKGYIHSWYPT*PVPGSV
Trigger: AACAGAGCCAGGAACTGGCAAAGTTGGGTACCAGCT...ATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000414247.1
ENST00000424122.5
CDS-3UTR CAA 90 bp TTAACATGGGGAAAGGCTAATTACCATGCCCAGTGCTGGGGTGGAGAAACAGAGTCTATAGTTCCCTTCTaGAGCCTTGGTGGGTTTTAT +
Preference number: 5 (lower is better)
Translates to: LTWGKANYHAQCWGGETESIVPF*SLGGFY
Trigger: ATAAAACCCACCAAGGCTCAAGAAGGGAACTATAGA...CTCTGTTTCTCCACCCCAGCACTGGGCATGGTAATTAGCCTTTCCCCATGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp CTTAGACGTGAAATTAAAAGGAGATCATGCTTCTTACCCAGGAAGTGGGGAATTAGAGAGCAGTCTAGCTaGATCCGCCCCACAGTCTTT +
Preference number: 5 (lower is better)
Translates to: LRREIKRRSCFLPRKWGIREQSS*IRPTVF
Trigger: AAAGACTGTGGGGCGGATCAAGCTAGACTGCTCTCT...AATTCCCCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAATTTCACGTCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp ACCCACAGGGCAGCAATAATCATTTATCCTGATGAAAGGTTCCTCTGTGAAAGGCTATGTACCAGGCACTaGGGAGGTATTTTCTCACAC +
Preference number: 5 (lower is better)
Translates to: THRAAIIIYPDERFLCERLCTRH*GGIFSH
Trigger: GTGTGAGAAAATACCTCCCAAGTGCCTGGTACATAG...CCTTTCACAGAGGAACCTTTCATCAGGATAAATGATTATTGCTGCCCTGTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp CGTGAAATTAAAAGGAGATCATGCTTCTTACCCAGGAAGTGGGGAATTCAGTTGCTATGTACCAGGCACTaGGGAGGTATTTTCTCACAC +
Preference number: 5 (lower is better)
Translates to: REIKRRSCFLPRKWGIQLLCTRH*GGIFSH
Trigger: GTGTGAGAAAATACCTCCCAAGTGCCTGGTACATAG...CAACTGAATTCCCCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAATTTCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp GCTTTCCATCCTCACAATATCCCTTATGAGGTAGGGACTACCCTCATTTTTACATGTCACTCTGTCCAGTaGATTTCCCTTCATCATCCA +
Preference number: 5 (lower is better)
Translates to: AFHPHNIPYEVGTTLIFTCHSVQ*ISLHHP
Trigger: TGGATGATGAAGGGAAATCAACTGGACAGAGTGACA...TGTAAAAATGAGGGTAGTCCCTACCTCATAAGGGATATTGTGAGGATGGAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp GAACGATTTCCAAATAACCTGATAAAGACAGAAGGTGGCCAAAGGTCTGAGTCCTCTATAGTTCCCTTCTaGAGCCTTGGTGGGTTTTAT +
Preference number: 5 (lower is better)
Translates to: ERFPNNLIKTEGGQRSESSIVPF*SLGGFY
Trigger: ATAAAACCCACCAAGGCTCAAGAAGGGAACTATAGA...GGACTCAGACCTTTGGCCACCTTCTGTCTTTATCAGGTTATTTGGAAATCGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410003.5
CDS-3UTR CAA 90 bp AAATATGCAGTGAACTGTCACCACACTATGTCCCCCACCAAGGGATATATACATCCCAAATGCAAACCCTaGGTGAATATTCTAGCAGTG +
Preference number: 5 (lower is better)
Translates to: KYAVNCHHTMSPTKGYIHPKCKP*VNILAV
Trigger: CACTGCTAGAATATTCACCAAGGGTTTGCATTTGGG...ATGTATATATCCCTTGGTGGGGGACATAGTGTGGTGACAGTTCACTGCATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
CDS-3UTR CAA 90 bp ATTAAAAGGAGATCATGCTTCTTACCCAGGAAGTGGGGAATTCAGTTGACCCTTAACCATTGTGACACTTaGGTACTAGAAGCTTATCTA +
Preference number: 5 (lower is better)
Translates to: IKRRSCFLPRKWGIQLTLNHCDT*VLEAYL
Trigger: TAGATAAGCTTCTAGTACCAAAGTGTCACAATGGTT...AAGGGTCAACTGAATTCCCCACTTCCTGGGTAAGAAGCATGATCTCCTTTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410003.5
CDS GCA 72 bp GCCCGGTCCCTGCACTCCCCACCATGGTGCCACAGCTaGAGCCGCCCGCTGCTCCCATCCACATGGATCCGG +
Preference number: 6 (lower is better)
Translates to: ARSLHSPPWCHS*SRPLLPSTWIR
Trigger: CCGGATCCATGTGGATGGGAGCAGCGGGCGGCTGCAGCTGTGGCACCATGGTGGGGAGTGCAGGGACCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459957.5
CDS CCA 72 bp GAGGGTCAGCCCTCCCAGGGTACCAGCCTCGATCCCTaGGCCCGGTCCCTGCACTCCCCACCATGGTGCCAC +
Preference number: 6 (lower is better)
Translates to: EGQPSQGTSLDP*ARSLHSPPWCH
Trigger: GTGGCACCATGGTGGGGAGTGCAGGGACCGGGCCCAGGGATCGAGGCTGGTACCCTGGGAGGGCTGACCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459957.5
CDS GCA 72 bp GGAGGTAATCATGGTGCCACAGCTGCAGCCGCCCGCTaGTCCCATCCACATGGATCCGGTGCAGGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: GGNHGATAAAAR*SHPHGSGAGPG
Trigger: CCCAGGGCCTGCACCGGATCCATGTGGATGGGAGCAGCGGGCGGCTGCAGCTGTGGCACCATGATTACCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000442235.6
ENST00000464241.5
ENST00000489152.5
CDS CAA 72 bp CCACCTCTCAGAGTTTCCTGTAGTCCCATCAAGGCCTaGCCCAGGCGGAAGAGGCCCCGGGGCCAGCCAGGC +
Preference number: 6 (lower is better)
Translates to: PPLRVSCSPIKA*PRRKRPRGQPG
Trigger: GCCTGGCTGGCCCCGGGGCCTCTTCCGCCTGGGCAAGGCCTTGATGGGACTACAGGAAACTCTGAGAGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414247.1
CDS GCA 72 bp GAGGATACAGGAAGGACTTGCGGAGACCACAGTAGGTaGCCAGTCCCTCAGCCCCCTTGCCCCTGTCACTCT +
Preference number: 6 (lower is better)
Translates to: EDTGRTCGDHSR*PVPQPPCPCHS
Trigger: AGAGTGACAGGGGCAAGGGGGCTGAGGGACTGGGCACCTACTGTGGTCTCCGCAAGTCCTTCCTGTATCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000424122.5
ENST00000442235.6
ENST00000449459.5
ENST00000459957.5
ENST00000463189.1
ENST00000464241.5
ENST00000489152.5
ENST00000491252.5
CDS CCA 72 bp CCGCTGCTCCCATCCACATGGATCCGGTGCAGGCCCTaGGGATCACTCTCCACAAGCCGTCGAAGAAAATCC +
Preference number: 6 (lower is better)
Translates to: PLLPSTWIRCRP*GSLSTSRRRKS
Trigger: GGATTTTCTTCGACGGCTTGTGGAGAGTGATCCCCAGGGCCTGCACCGGATCCATGTGGATGGGAGCAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000442235.6
ENST00000459957.5
ENST00000464241.5
ENST00000489152.5
CDS CCA 72 bp AGAAGGCAAGAGCGGAGCTCTCGGGCTGCGTCAGGCTaGGACCCACCTCTCAGAGTTTCCTGTAGTCCCATC +
Preference number: 6 (lower is better)
Translates to: RRQERSSRAASG*DPPLRVSCSPI
Trigger: GATGGGACTACAGGAAACTCTGAGAGGTGGGTCCCAGCCTGACGCAGCCCGAGAGCTCCGCTCTTGCCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414247.1
CDS TCA 72 bp CGTCTGGCGCCCATCCGTCGCGGGTTTCTGCACAGCTaGCTTCAAAGAGGCGTGACCAAAATGAGCAGGACT +
Preference number: 6 (lower is better)
Translates to: RLAPIRRGFLHS*LQRGVTKMSRT
Trigger: AGTCCTGCTCATTTTGGTCACGCCTCTTTGAAGTCAGCTGTGCAGAAACCCGCGACGGATGGGCGCCAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463189.1
ENST00000463704.5
CDS GCA 72 bp TGTCCTCTTCGCCGTAATCCTCTGGACCGAATTCCTTaGAAAGTTTGGGTGCAGCAGCGACCTCCAGTGGGC +
Preference number: 6 (lower is better)
Translates to: CPLRRNPLDRIP*KVWVQQRPPVG
Trigger: GCCCACTGGAGGTCGCTGCTGCACCCAAACTTTGCAAGGAATTCGGTCCAGAGGATTACGGCGAAGAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000442235.6
ENST00000459957.5
ENST00000464241.5
ENST00000489152.5
CDS CCA 72 bp AGTGGCCCAGGAGGTAATCTAAGATCCTCAAGGGCATaGCCGGAGACTACAACTCCCCAAAGCCTCCAGAGC +
Preference number: 6 (lower is better)
Translates to: SGPGGNLRSSRA*PETTTPQSLQS
Trigger: GCTCTGGAGGCTTTGGGGAGTTGTAGTCTCCGGCCATGCCCTTGAGGATCTTAGATTACCTCCTGGGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463189.1
CDS CCA 72 bp AGGACGGAGAGAGAAAGGATCTCACTTGCCAGTTCCTaGCTCTGTTGTAAGGCAGCTGCCAGCAGTCCCGGA +
Preference number: 6 (lower is better)
Translates to: RTERERISLASS*LCCKAAASSPG
Trigger: TCCGGGACTGCTGGCAGCTGCCTTACAACAGAGCCAGGAACTGGCAAGTGAGATCCTTTCTCTCTCCGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489152.5
ENST00000491252.5
CDS CCA 72 bp GTAGGTCTCTTGACCCTAGAGCCAGAGAACTCCCACTaGACCCTGTGTCAATCCTTAGACCCTGTGCCTCCC +
Preference number: 6 (lower is better)
Translates to: VGLLTLEPENSH*TLCQSLDPVPP
Trigger: GGGAGGCACAGGGTCTAAGGATTGACACAGGGTCCAGTGGGAGTTCTCTGGCTCTAGGGTCAAGAGACCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491252.5
CDS TCA 72 bp CCCAGCAGCTCCTTGTGCCCCTTCCACGGTTCCAGCTaGATAAGGTTCTTCAGCCACCTCACCTGTACCTTT +
Preference number: 6 (lower is better)
Translates to: PSSSLCPFHGSS*IRFFSHLTCTF
Trigger: AAAGGTACAGGTGAGGTGGCTGAAGAACCTTATTCAGCTGGAACCGTGGAAGGGGCACAAGGAGCTGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491252.5
CDS GCA 72 bp TTACCTCTTCGCCGTAATCCTCTGGACCGAATTCCTTaGAAAGTTTGGGTGCAGCAGCGACCTCCAGTGGGC +
Preference number: 6 (lower is better)
Translates to: LPLRRNPLDRIP*KVWVQQRPPVG
Trigger: GCCCACTGGAGGTCGCTGCTGCACCCAAACTTTGCAAGGAATTCGGTCCAGAGGATTACGGCGAAGAGGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463189.1
ENST00000463704.5
CDS TCA 72 bp ATTGAAAGAACCCTGGGGGACGGCAAAGCCCTCTCCTaGGAATCTCACCTCTTCTGTCACCAGGAGCTTCTG +
Preference number: 6 (lower is better)
Translates to: IERTLGDGKALS*ESHLFCHQELL
Trigger: CAGAAGCTCCTGGTGACAGAAGAGGTGAGATTCTCAGGAGAGGGCTTTGCCGTCCCCCAGGGTTCTTTCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489152.5
ENST00000491252.5
CDS CCA 72 bp AGTGGCCCAGGAGGTAATCTCTTCGCCGTAATCCTCTaGACCGAATTCCTTGCAAAGTTTGGGTGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: SGPGGNLFAVIL*TEFLAKFGCSS
Trigger: GCTGCTGCACCCAAACTTTGCAAGGAATTCGGTCCAGAGGATTACGGCGAAGAGATTACCTCCTGGGCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424122.5
ENST00000449459.5
ENST00000491252.5
CDS CCA 72 bp ACTGAGGGTCGCTTTTACCTCTTCGCCGTAATCCTCTaGACCGAATTCCTTGCAAAGTTTGGGTGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: TEGRFYLFAVIL*TEFLAKFGCSS
Trigger: GCTGCTGCACCCAAACTTTGCAAGGAATTCGGTCCAGAGGATTACGGCGAAGAGGTAAAAGCGACCCTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463189.1
ENST00000463704.5
CDS CCA 72 bp AATATAGGGATGGGGATACAGGGATTGAAAGAACCCTaGGGGACGGCAAAGCCCTCTCCTGAGAATCTCACC +
Preference number: 6 (lower is better)
Translates to: NIGMGIQGLKEP*GTAKPSPENLT
Trigger: GGTGAGATTCTCAGGAGAGGGCTTTGCCGTCCCCCAGGGTTCTTTCAATCCCTGTATCCCCATCCCTATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489152.5
ENST00000491252.5
CDS CCA 72 bp CCACGGCCTCATGGTAGAAACCATTTTGAGCAAAGCTaGTACCCAACTCTGGAAAGGAAAGAGGGTGAGAAG +
Preference number: 6 (lower is better)
Translates to: PRPHGRNHFEQS*YPTLERKEGEK
Trigger: CTTCTCACCCTCTTTCCTTTCCAGAGTTGGGTACCAGCTTTGCTCAAAATGGTTTCTACCATGAGGCCGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489152.5
ENST00000491252.5
CDS GCA 72 bp ACCCACTCCCTAATCCTCAACTCAGAGACCCTTGTCTaGTCAATTCTACCCACTTCGAGCATCTGTTACATC +
Preference number: 6 (lower is better)
Translates to: THSLILNSETLV*SILPTSSICYI
Trigger: GATGTAACAGATGCTCGAAGTGGGTAGAATTGAGCAGACAAGGGTCTCTGAGTTGAGGATTAGGGAGTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463704.5
CDS CCA 72 bp AAGAAAATCCACTATGTCCTCTTCGCCGTAATCCTCTaGACCGAATTCCTTGCAAAGTTTGGGTGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: KKIHYVLFAVIL*TEFLAKFGCSS
Trigger: GCTGCTGCACCCAAACTTTGCAAGGAATTCGGTCCAGAGGATTACGGCGAAGAGGACATAGTGGATTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233623.11
ENST00000410003.5
ENST00000442235.6
ENST00000459957.5
ENST00000464241.5
ENST00000489152.5