Pregenerated sensors for TTC30B (Homo sapiens)
Ensembl gene IDs: ENSG00000196659Ensembl transcript IDs: ENST00000408939.4
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTTCAGAAAATAAAATGCCTGATCAGAATGCATGTGGTTCCCAGTaGGAACTCCAAATAACTCTTGGGAGTTGCGGACATGAAATGAAC | + |
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Preference number: 1 (lower is better) Translates to: GSENKMPDQNACGSQ*ELQITLGSCGHEMN Trigger: GTTCATTTCATGTCCGCAACTCCCAAGAGTTATTTGGAGTTCCCACTGGGAACCACATGCATTCTGATCAGGCATTTTATTTTCTGAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| 3UTR TCA 90 bp | TGGTTCCCAGTGGGAACTCCAAATAACTCTTGGGAGTTGCGGACATaGAATGAACATTACAACTTAGAATTGACCTTTTTGGTCAGACCT | + |
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Preference number: 1 (lower is better) Translates to: WFPVGTPNNSWELRT*NEHYNLELTFLVRP Trigger: AGGTCTGACCAAAAAGGTCAATTCTAAGTTGTAATGTTCATTTCATGTCCGCAACTCCCAAGAGTTATTTGGAGTTCCCACTGGGAACCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| 3UTR GCA 90 bp | GACATTGAATGTGCTATGGGATGCAGTGAAGAGGTCACTAAACATTaGTTGTCCTCCACATGTGAGACTAAAGCATCAGTGGTAAATGAT | + |
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Preference number: 1 (lower is better) Translates to: DIECAMGCSEEVTKH*LSSTCETKASVVND Trigger: ATCATTTACCACTGATGCTTTAGTCTCACATGTGGAGGACAAGCAATGTTTAGTGACCTCTTCACTGCATCCCATAGCACATTCAATGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| 3UTR GCA 90 bp | TTGTCAAACAAAGAACATTTCCCAGACATTGAATGTGCTATGGGATaGAGTGAAGAGGTCACTAAACATTGCTTGTCCTCCACATGTGAG | + |
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Preference number: 1 (lower is better) Translates to: LSNKEHFPDIECAMG*SEEVTKHCLSSTCE Trigger: CTCACATGTGGAGGACAAGCAATGTTTAGTGACCTCTTCACTGCATCCCATAGCACATTCAATGTCTGGGAAATGTTCTTTGTTTGACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| 3UTR CCA 90 bp | AGAAGTTGTCAAACAAAGAACATTTCCCAGACATTGAATGTGCTATaGGATGCAGTGAAGAGGTCACTAAACATTGCTTGTCCTCCACAT | + |
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Preference number: 1 (lower is better) Translates to: RSCQTKNISQTLNVL*DAVKRSLNIACPPH Trigger: ATGTGGAGGACAAGCAATGTTTAGTGACCTCTTCACTGCATCCCATAGCACATTCAATGTCTGGGAAATGTTCTTTGTTTGACAACTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| 3UTR TCA 90 bp | ATACAATTTGAGCACTCAGGAGGTCATGCTACAGAGGAATTATGCTaGGCATGTTTCTTATCAGTACTTATGTGGCTAAGTGGTTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: IQFEHSGGHATEELC*ACFLSVLMWLSGSF Trigger: AAAGGAACCACTTAGCCACATAAGTACTGATAAGAAACATGCTCAGCATAATTCCTCTGTAGCATGACCTCCTGAGTGCTCAAATTGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| 3UTR TCA 90 bp | CCATTGAACTTCACAATAAGCCAAATTTCCTGGTATAATACAATTTaGGCACTCAGGAGGTCATGCTACAGAGGAATTATGCTGAGCATG | + |
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Preference number: 1 (lower is better) Translates to: PLNFTISQISWYNTI*ALRRSCYRGIMLSM Trigger: CATGCTCAGCATAATTCCTCTGTAGCATGACCTCCTGAGTGCTCAAATTGTATTATACCAGGAAATTTGGCTTATTGTGAAGTTCAATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| 3UTR TCA 90 bp | GAACATTACAACTTAGAATTGACCTTTTTGGTCAGACCTGGTGGCTaGGATTTTTCCTTATTCAAGAGGCTACAACATGGAAACACTGTA | + |
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Preference number: 1 (lower is better) Translates to: EHYNLELTFLVRPGG*DFSLFKRLQHGNTV Trigger: TACAGTGTTTCCATGTTGTAGCCTCTTGAATAAGGAAAAATCTCAGCCACCAGGTCTGACCAAAAAGGTCAATTCTAAGTTGTAATGTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| 3UTR-3UTR TCA 90 bp | CAGAATGCATGTGGTTCCCAGTGGGAACTCCAAATAACTCTTGGGAGTTGCGGAGTCAGACCTGGTGGCTaGGATTTTTCCTTATTCAAG | + |
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Preference number: 2 (lower is better) Translates to: QNACGSQWELQITLGSCGVRPGG*DFSLFK Trigger: CTTGAATAAGGAAAAATCTCAGCCACCAGGTCTGAC...TCCGCAACTCCCAAGAGTTATTTGGAGTTCCCACTGGGAACCACATGCATTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| 3UTR-3UTR TCA 90 bp | CTCAGGAGGTCATGCTACAGAGGAATTATGCTGAGCATGTTTCTTATCAGTACTTGCTTGGTCCCTGAATaGTGTAATCCTTGTGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: LRRSCYRGIMLSMFLISTCLVPE*CNPCAK Trigger: CTTTGCACAAGGATTACATCATTCAGGGACCAAGCA...AGTACTGATAAGAAACATGCTCAGCATAATTCCTCTGTAGCATGACCTCCTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| 3UTR-3UTR TCA 90 bp | AAACATTGCTTGTCCTCCACATGTGAGACTAAAGCATCAGTGGTAAATGATAGCACTCTTAACTATTACTaGGATAGTGCTTGGTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: KHCLSSTCETKASVVNDSTLNYY*DSAWSL Trigger: CAGGGACCAAGCACTATCTCAGTAATAGTTAAGAGT...GCTATCATTTACCACTGATGCTTTAGTCTCACATGTGGAGGACAAGCAATGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| 3UTR-3UTR CCA 90 bp | AGTCTAATACACTTGATTTTTCTAAGCCAGGTCAAGTTAGGATTGACAGTTACTGTAGTCCCAGCTACTTaGGAAGCTGAAGTGGGAGTA | + |
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Preference number: 2 (lower is better) Translates to: SLIHLIFLSQVKLGLTVTVVPAT*EAEVGV Trigger: TACTCCCACTTCAGCTTCCCAAGTAGCTGGGACTAC...AGTAACTGTCAATCCTAACTTGACCTGGCTTAGAAAAATCAAGTGTATTAGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| 3UTR-3UTR CCA 90 bp | TTGTCCTCCACATGTGAGACTAAAGCATCAGTGGTAAATGATAGCAGCTCAGATTTTGGTCAGACCTGGTaGCTGAGATTTTTCCTTATT | + |
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Preference number: 2 (lower is better) Translates to: LSSTCETKASVVNDSSSDFGQTW*LRFFLI Trigger: AATAAGGAAAAATCTCAGCCACCAGGTCTGACCAAA...ATCTGAGCTGCTATCATTTACCACTGATGCTTTAGTCTCACATGTGGAGGACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| 3UTR-3UTR CCA 90 bp | AAACATTGCTTGTCCTCCACATGTGAGACTAAAGCATCAGTGGTAAATGATAGCCTTTTTGGTCAGACCTaGTGGCTGAGATTTTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: KHCLSSTCETKASVVNDSLFGQT*WLRFFL Trigger: AAGGAAAAATCTCAGCCACCAGGTCTGACCAAAAAG...GCTATCATTTACCACTGATGCTTTAGTCTCACATGTGGAGGACAAGCAATGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| 3UTR-3UTR CCA 90 bp | AGTCTAATACACTTGATTTTTCTAAGCCAGGTCAAGTTAGGATTGACAGTTACTCAAGAGGCTACAACATaGAAACACTGTACAGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: SLIHLIFLSQVKLGLTVTQEATT*KHCTAS Trigger: GCTGGCTGTACAGTGTTTCCATGTTGTAGCCTCTTG...AGTAACTGTCAATCCTAACTTGACCTGGCTTAGAAAAATCAAGTGTATTAGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| 3UTR-3UTR TCA 90 bp | TACAGAAGTTGTCAAACAAAGAACATTTCCCAGACATTGAATGTGCTATGGGATAATGAGTGTAAATTGTaGGACTACTCTCACACAATC | + |
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Preference number: 2 (lower is better) Translates to: YRSCQTKNISQTLNVLWDNECKL*DYSHTI Trigger: GATTGTGTGAGAGTAGTCTCACAATTTACACTCATT...ATCCCATAGCACATTCAATGTCTGGGAAATGTTCTTTGTTTGACAACTTCTGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| 3UTR-3UTR TCA 90 bp | AGTCTAATACACTTGATTTTTCTAAGCCAGGTCAAGTTAGGATTGACAGTTACTTGGGAGTTGCGGACATaGAATGAACATTACAACTTA | + |
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Preference number: 2 (lower is better) Translates to: SLIHLIFLSQVKLGLTVTWELRT*NEHYNL Trigger: TAAGTTGTAATGTTCATTTCATGTCCGCAACTCCCA...AGTAACTGTCAATCCTAACTTGACCTGGCTTAGAAAAATCAAGTGTATTAGACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| 3UTR-3UTR GCA 90 bp | AGTCTAATACACTTGATTTTTCTAAGCCAGGTCAAGTTAGGATTGACAGTTACTATAACTCTTGGGAGTTaGGGACATGAAATGAACATT | + |
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Preference number: 2 (lower is better) Translates to: SLIHLIFLSQVKLGLTVTITLGS*GHEMNI Trigger: AATGTTCATTTCATGTCCGCAACTCCCAAGAGTTAT...AGTAACTGTCAATCCTAACTTGACCTGGCTTAGAAAAATCAAGTGTATTAGACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| 3UTR-3UTR CCA 90 bp | TACAGAAGTTGTCAAACAAAGAACATTTCCCAGACATTGAATGTGCTATGGGATAAAATCATCTCATTATaGCAGAGGTTCCCTATCATT | + |
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Preference number: 2 (lower is better) Translates to: YRSCQTKNISQTLNVLWDKIISL*QRFPII Trigger: AATGATAGGGAACCTCTGCCATAATGAGATGATTTT...ATCCCATAGCACATTCAATGTCTGGGAAATGTTCTTTGTTTGACAACTTCTGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| 3UTR-3UTR GCA 90 bp | AGTCTAATACACTTGATTTTTCTAAGCCAGGTCAAGTTAGGATTGACAGTTACTCAGCATATCCTAAATTaGAAACACAAAGGTAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: SLIHLIFLSQVKLGLTVTQHILN*KHKGRN Trigger: ATTCCTACCTTTGTGTTTGCAATTTAGGATATGCTG...AGTAACTGTCAATCCTAACTTGACCTGGCTTAGAAAAATCAAGTGTATTAGACT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| 3UTR CCA 72 bp | GGGAGTATGCTTAAGCCTAGGAGCTGGATACTAGCCTaGGCAACAAACATAACAAAACCTGTGTCTCTTAAA | + |
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Preference number: 3 (lower is better) Translates to: GSMLKPRSWILA*ATNITKPVSLK Trigger: TTTAAGAGACACAGGTTTTGTTATGTTTGTTGCCCAGGCTAGTATCCAGCTCCTAGGCTTAAGCATACTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| 3UTR CCA 72 bp | AATAAAATGCCTGATCAGAATGCATGTGGTTCCCAGTaGGAACTCCAAATAACTCTTGGGAGTTGCGGACAT | + |
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Preference number: 3 (lower is better) Translates to: NKMPDQNACGSQ*ELQITLGSCGH Trigger: ATGTCCGCAACTCCCAAGAGTTATTTGGAGTTCCCACTGGGAACCACATGCATTCTGATCAGGCATTTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| 3UTR TCA 72 bp | GAGCACTCAGGAGGTCATGCTACAGAGGAATTATGCTaGGCATGTTTCTTATCAGTACTTATGTGGCTAAGT | + |
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Preference number: 3 (lower is better) Translates to: EHSGGHATEELC*ACFLSVLMWLS Trigger: ACTTAGCCACATAAGTACTGATAAGAAACATGCTCAGCATAATTCCTCTGTAGCATGACCTCCTGAGTGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| 3UTR GCA 72 bp | AAAGAACATTTCCCAGACATTGAATGTGCTATGGGATaGAGTGAAGAGGTCACTAAACATTGCTTGTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: KEHFPDIECAMG*SEEVTKHCLSS Trigger: GGAGGACAAGCAATGTTTAGTGACCTCTTCACTGCATCCCATAGCACATTCAATGTCTGGGAAATGTTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| 3UTR-3UTR CAA 90 bp | GATGCAGTGAAGAGGTCACTAAACATTGCTTGTCCTCCACATGTGAGACTAAAGTTCAGTCTAATACACTaGATTTTTCTAAGCCAGGTC | + |
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Preference number: 3 (lower is better) Translates to: DAVKRSLNIACPPHVRLKFSLIH*IFLSQV Trigger: GACCTGGCTTAGAAAAATCAAGTGTATTAGACTGAA...CTTTAGTCTCACATGTGGAGGACAAGCAATGTTTAGTGACCTCTTCACTGCATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| 3UTR-3UTR CAA 90 bp | TACAGAAGTTGTCAAACAAAGAACATTTCCCAGACATTGAATGTGCTATGGGATGTCACTAAACATTGCTaGTCCTCCACATGTGAGACT | + |
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Preference number: 3 (lower is better) Translates to: YRSCQTKNISQTLNVLWDVTKHC*SSTCET Trigger: AGTCTCACATGTGGAGGACAAGCAATGTTTAGTGAC...ATCCCATAGCACATTCAATGTCTGGGAAATGTTCTTTGTTTGACAACTTCTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| 3UTR TCA 72 bp | AACTTAGAATTGACCTTTTTGGTCAGACCTGGTGGCTaGGATTTTTCCTTATTCAAGAGGCTACAACATGGA | + |
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Preference number: 3 (lower is better) Translates to: NLELTFLVRPGG*DFSLFKRLQHG Trigger: TCCATGTTGTAGCCTCTTGAATAAGGAAAAATCTCAGCCACCAGGTCTGACCAAAAAGGTCAATTCTAAGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| 3UTR CCA 72 bp | CAAACAAAGAACATTTCCCAGACATTGAATGTGCTATaGGATGCAGTGAAGAGGTCACTAAACATTGCTTGT | + |
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Preference number: 3 (lower is better) Translates to: QTKNISQTLNVL*DAVKRSLNIAC Trigger: ACAAGCAATGTTTAGTGACCTCTTCACTGCATCCCATAGCACATTCAATGTCTGGGAAATGTTCTTTGTTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| 3UTR-3UTR CAA 90 bp | TACAGAAGTTGTCAAACAAAGAACATTTCCCAGACATTGAATGTGCTATGGGATCAGGTCAAGTTAGGATaGACAGTTACTTTTTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: YRSCQTKNISQTLNVLWDQVKLG*TVTFCG Trigger: CCCACAAAAAGTAACTGTCAATCCTAACTTGACCTG...ATCCCATAGCACATTCAATGTCTGGGAAATGTTCTTTGTTTGACAACTTCTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| 3UTR TCA 72 bp | GTGGGAACTCCAAATAACTCTTGGGAGTTGCGGACATaGAATGAACATTACAACTTAGAATTGACCTTTTTG | + |
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Preference number: 3 (lower is better) Translates to: VGTPNNSWELRT*NEHYNLELTFL Trigger: CAAAAAGGTCAATTCTAAGTTGTAATGTTCATTTCATGTCCGCAACTCCCAAGAGTTATTTGGAGTTCCCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| 3UTR CCA 72 bp | TTACAACTTAGAATTGACCTTTTTGGTCAGACCTGGTaGCTGAGATTTTTCCTTATTCAAGAGGCTACAACA | + |
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Preference number: 3 (lower is better) Translates to: LQLRIDLFGQTW*LRFFLIQEATT Trigger: TGTTGTAGCCTCTTGAATAAGGAAAAATCTCAGCCACCAGGTCTGACCAAAAAGGTCAATTCTAAGTTGTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| CDS-3UTR TCA 90 bp | AGGAGCTGGATACTAGCCTGGGCAACAAACATAACAAAACCTGTGTCTCTTAAAAGCGTGCATTGCGGATaGGGCGGTACACGACCGCGG | + |
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Preference number: 4 (lower is better) Translates to: RSWILAWATNITKPVSLKSVHCG*GGTRPR Trigger: CCGCGGTCGTGTACCGCCTCATCCGCAATGCACGCT...TTTAAGAGACACAGGTTTTGTTATGTTTGTTGCCCAGGCTAGTATCCAGCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| CDS-3UTR GCA 90 bp | CTCAGGAGGTCATGCTACAGAGGAATTATGCTGAGCATGTTTCTTATCAGTACTCTCCTAGGGCTCCGCTaGAGTTCTCCGCCCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LRRSCYRGIMLSMFLISTLLGLR*SSPPSS Trigger: GCTGCTGGGCGGAGAACTGCAGCGGAGCCCTAGGAG...AGTACTGATAAGAAACATGCTCAGCATAATTCCTCTGTAGCATGACCTCCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| CDS-3UTR TCA 90 bp | CAGAATGCATGTGGTTCCCAGTGGGAACTCCAAATAACTCTTGGGAGTTGCGGATGCTTGGTCCCTGAATaGTGTAATCCTTGTGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: QNACGSQWELQITLGSCGCLVPE*CNPCAK Trigger: CTTTGCACAAGGATTACATCATTCAGGGACCAAGCA...TCCGCAACTCCCAAGAGTTATTTGGAGTTCCCACTGGGAACCACATGCATTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| CDS-3UTR GCA 90 bp | CAGAATGCATGTGGTTCCCAGTGGGAACTCCAAATAACTCTTGGGAGTTGCGGAGAGGTCACTAAACATTaGTTGTCCTCCACATGTGAG | + |
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Preference number: 4 (lower is better) Translates to: QNACGSQWELQITLGSCGEVTKH*LSSTCE Trigger: CTCACATGTGGAGGACAAGCAATGTTTAGTGACCTC...TCCGCAACTCCCAAGAGTTATTTGGAGTTCCCACTGGGAACCACATGCATTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| CDS-3UTR TCA 90 bp | GATGCAGTGAAGAGGTCACTAAACATTGCTTGTCCTCCACATGTGAGACTAAAGGTCAGACCTGGTGGCTaGGATTTTTCCTTATTCAAG | + |
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Preference number: 4 (lower is better) Translates to: DAVKRSLNIACPPHVRLKVRPGG*DFSLFK Trigger: CTTGAATAAGGAAAAATCTCAGCCACCAGGTCTGAC...CTTTAGTCTCACATGTGGAGGACAAGCAATGTTTAGTGACCTCTTCACTGCATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| CDS-3UTR TCA 90 bp | AGTCTAATACACTTGATTTTTCTAAGCCAGGTCAAGTTAGGATTGACAGTTACTAGGGGCTACCAAGACTaGCAGGGGCACAAAGCTACT | + |
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Preference number: 4 (lower is better) Translates to: SLIHLIFLSQVKLGLTVTRGYQD*QGHKAT Trigger: AGTAGCTTTGTGCCCCTGTCAGTCTTGGTAGCCCCT...AGTAACTGTCAATCCTAACTTGACCTGGCTTAGAAAAATCAAGTGTATTAGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| CDS-3UTR GCA 90 bp | AGGAGCTGGATACTAGCCTGGGCAACAAACATAACAAAACCTGTGTCTCTTAAAGGGGCACAAAGCTACTaGAGCAACACTTTTAGTACA | + |
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Preference number: 4 (lower is better) Translates to: RSWILAWATNITKPVSLKGAQSY*SNTFST Trigger: TGTACTAAAAGTGTTGCTGCAGTAGCTTTGTGCCCC...TTTAAGAGACACAGGTTTTGTTATGTTTGTTGCCCAGGCTAGTATCCAGCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| CDS-3UTR CCA 90 bp | ACATTACAACTTAGAATTGACCTTTTTGGTCAGACCTGGTGGCTGAGATTTTTCGTAGTCCCAGCTACTTaGGAAGCTGAAGTGGGAGTA | + |
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Preference number: 4 (lower is better) Translates to: TLQLRIDLFGQTWWLRFFVVPAT*EAEVGV Trigger: TACTCCCACTTCAGCTTCCCAAGTAGCTGGGACTAC...GAAAAATCTCAGCCACCAGGTCTGACCAAAAAGGTCAATTCTAAGTTGTAATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| CDS-3UTR CCA 90 bp | CTCAGGAGGTCATGCTACAGAGGAATTATGCTGAGCATGTTTCTTATCAGTACTGACAGTTACTTTTTGTaGGAAGAGAGGAGTGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: LRRSCYRGIMLSMFLISTDSYFL*EERSEE Trigger: CTCCTCACTCCTCTCTTCCCACAAAAAGTAACTGTC...AGTACTGATAAGAAACATGCTCAGCATAATTCCTCTGTAGCATGACCTCCTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| CDS-3UTR CCA 90 bp | TTGTCCTCCACATGTGAGACTAAAGCATCAGTGGTAAATGATAGCAGCTCAGATACATTGAATGTGCTATaGGATGCAGTGAAGAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: LSSTCETKASVVNDSSSDTLNVL*DAVKRS Trigger: TGACCTCTTCACTGCATCCCATAGCACATTCAATGT...ATCTGAGCTGCTATCATTTACCACTGATGCTTTAGTCTCACATGTGGAGGACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| CDS-3UTR TCA 90 bp | GATGCAGTGAAGAGGTCACTAAACATTGCTTGTCCTCCACATGTGAGACTAAAGACAGAGGAATTATGCTaGGCATGTTTCTTATCAGTA | + |
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Preference number: 4 (lower is better) Translates to: DAVKRSLNIACPPHVRLKTEELC*ACFLSV Trigger: TACTGATAAGAAACATGCTCAGCATAATTCCTCTGT...CTTTAGTCTCACATGTGGAGGACAAGCAATGTTTAGTGACCTCTTCACTGCATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| CDS-3UTR TCA 90 bp | TGGGCAACAAACATAACAAAACCTGTGTCTCTTAAACAAACCCCTGAGTTCTCATGGTATAATACAATTTaGGCACTCAGGAGGTCATGC | + |
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Preference number: 4 (lower is better) Translates to: WATNITKPVSLKQTPEFSWYNTI*ALRRSC Trigger: GCATGACCTCCTGAGTGCTCAAATTGTATTATACCA...TGAGAACTCAGGGGTTTGTTTAAGAGACACAGGTTTTGTTATGTTTGTTGCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| CDS-3UTR CCA 90 bp | TACAGAAGTTGTCAAACAAAGAACATTTCCCAGACATTGAATGTGCTATGGGATCAAGAGGCTACAACATaGAAACACTGTACAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: YRSCQTKNISQTLNVLWDQEATT*KHCTAS Trigger: GCTGGCTGTACAGTGTTTCCATGTTGTAGCCTCTTG...ATCCCATAGCACATTCAATGTCTGGGAAATGTTCTTTGTTTGACAACTTCTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| CDS-3UTR TCA 90 bp | TGGGCAACAAACATAACAAAACCTGTGTCTCTTAAACAAACCCCTGAGTTCTCACACTATCACGAAGCATaGTTGTGTGTTTTGACATGT | + |
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Preference number: 4 (lower is better) Translates to: WATNITKPVSLKQTPEFSHYHEA*LCVLTC Trigger: ACATGTCAAAACACACAATCATGCTTCGTGATAGTG...TGAGAACTCAGGGGTTTGTTTAAGAGACACAGGTTTTGTTATGTTTGTTGCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| CDS-3UTR TCA 90 bp | TTGTCCTCCACATGTGAGACTAAAGCATCAGTGGTAAATGATAGCAGCTCAGATAATGAGTGTAAATTGTaGGACTACTCTCACACAATC | + |
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Preference number: 4 (lower is better) Translates to: LSSTCETKASVVNDSSSDNECKL*DYSHTI Trigger: GATTGTGTGAGAGTAGTCTCACAATTTACACTCATT...ATCTGAGCTGCTATCATTTACCACTGATGCTTTAGTCTCACATGTGGAGGACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| CDS-3UTR TCA 90 bp | TGGGCAACAAACATAACAAAACCTGTGTCTCTTAAACAAACCCCTGAGTTCTCATGGGAGTTGCGGACATaGAATGAACATTACAACTTA | + |
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Preference number: 4 (lower is better) Translates to: WATNITKPVSLKQTPEFSWELRT*NEHYNL Trigger: TAAGTTGTAATGTTCATTTCATGTCCGCAACTCCCA...TGAGAACTCAGGGGTTTGTTTAAGAGACACAGGTTTTGTTATGTTTGTTGCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| CDS-3UTR GCA 90 bp | CTCAGGAGGTCATGCTACAGAGGAATTATGCTGAGCATGTTTCTTATCAGTACTATAACTCTTGGGAGTTaGGGACATGAAATGAACATT | + |
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Preference number: 4 (lower is better) Translates to: LRRSCYRGIMLSMFLISTITLGS*GHEMNI Trigger: AATGTTCATTTCATGTCCGCAACTCCCAAGAGTTAT...AGTACTGATAAGAAACATGCTCAGCATAATTCCTCTGTAGCATGACCTCCTGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| CDS-3UTR GCA 90 bp | ACATTACAACTTAGAATTGACCTTTTTGGTCAGACCTGGTGGCTGAGATTTTTCGAATGTGCTATGGGATaGAGTGAAGAGGTCACTAAA | + |
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Preference number: 4 (lower is better) Translates to: TLQLRIDLFGQTWWLRFFECAMG*SEEVTK Trigger: TTTAGTGACCTCTTCACTGCATCCCATAGCACATTC...GAAAAATCTCAGCCACCAGGTCTGACCAAAAAGGTCAATTCTAAGTTGTAATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| CDS-3UTR CCA 90 bp | AAACATTGCTTGTCCTCCACATGTGAGACTAAAGCATCAGTGGTAAATGATAGCTTTGGTCAGACCTGGTaGCTGAGATTTTTCCTTATT | + |
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Preference number: 4 (lower is better) Translates to: KHCLSSTCETKASVVNDSFGQTW*LRFFLI Trigger: AATAAGGAAAAATCTCAGCCACCAGGTCTGACCAAA...GCTATCATTTACCACTGATGCTTTAGTCTCACATGTGGAGGACAAGCAATGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| CDS-3UTR TCA 90 bp | AGTCTAATACACTTGATTTTTCTAAGCCAGGTCAAGTTAGGATTGACAGTTACTACATTTCCCAGACATTaGATGTGCTATGGGATGCAG | + |
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Preference number: 4 (lower is better) Translates to: SLIHLIFLSQVKLGLTVTTFPRH*MCYGMQ Trigger: CTGCATCCCATAGCACATTCAATGTCTGGGAAATGT...AGTAACTGTCAATCCTAACTTGACCTGGCTTAGAAAAATCAAGTGTATTAGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| CDS-3UTR GCA 90 bp | CTCAGGAGGTCATGCTACAGAGGAATTATGCTGAGCATGTTTCTTATCAGTACTCAGCATATCCTAAATTaGAAACACAAAGGTAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: LRRSCYRGIMLSMFLISTQHILN*KHKGRN Trigger: ATTCCTACCTTTGTGTTTGCAATTTAGGATATGCTG...AGTACTGATAAGAAACATGCTCAGCATAATTCCTCTGTAGCATGACCTCCTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| CDS-3UTR CCA 90 bp | AGTCTAATACACTTGATTTTTCTAAGCCAGGTCAAGTTAGGATTGACAGTTACTGCATGTGGTTCCCAGTaGGAACTCCAAATAACTCTT | + |
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Preference number: 4 (lower is better) Translates to: SLIHLIFLSQVKLGLTVTACGSQ*ELQITL Trigger: AAGAGTTATTTGGAGTTCCCACTGGGAACCACATGC...AGTAACTGTCAATCCTAACTTGACCTGGCTTAGAAAAATCAAGTGTATTAGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| CDS-3UTR TCA 90 bp | AGTCTAATACACTTGATTTTTCTAAGCCAGGTCAAGTTAGGATTGACAGTTACTACTCTTAACTATTACTaGGATAGTGCTTGGTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: SLIHLIFLSQVKLGLTVTTLNYY*DSAWSL Trigger: CAGGGACCAAGCACTATCTCAGTAATAGTTAAGAGT...AGTAACTGTCAATCCTAACTTGACCTGGCTTAGAAAAATCAAGTGTATTAGACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| CDS-3UTR CCA 90 bp | AGTCTAATACACTTGATTTTTCTAAGCCAGGTCAAGTTAGGATTGACAGTTACTCTTTTTGGTCAGACCTaGTGGCTGAGATTTTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: SLIHLIFLSQVKLGLTVTLFGQT*WLRFFL Trigger: AAGGAAAAATCTCAGCCACCAGGTCTGACCAAAAAG...AGTAACTGTCAATCCTAACTTGACCTGGCTTAGAAAAATCAAGTGTATTAGACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| CDS-3UTR CCA 90 bp | AGTCTAATACACTTGATTTTTCTAAGCCAGGTCAAGTTAGGATTGACAGTTACTAAAATCATCTCATTATaGCAGAGGTTCCCTATCATT | + |
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Preference number: 4 (lower is better) Translates to: SLIHLIFLSQVKLGLTVTKIISL*QRFPII Trigger: AATGATAGGGAACCTCTGCCATAATGAGATGATTTT...AGTAACTGTCAATCCTAACTTGACCTGGCTTAGAAAAATCAAGTGTATTAGACT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| CDS-3UTR CAA 90 bp | TTGTCCTCCACATGTGAGACTAAAGCATCAGTGGTAAATGATAGCAGCTCAGATGTCACTAAACATTGCTaGTCCTCCACATGTGAGACT | + |
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Preference number: 5 (lower is better) Translates to: LSSTCETKASVVNDSSSDVTKHC*SSTCET Trigger: AGTCTCACATGTGGAGGACAAGCAATGTTTAGTGAC...ATCTGAGCTGCTATCATTTACCACTGATGCTTTAGTCTCACATGTGGAGGACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| CDS-3UTR CAA 90 bp | ACATTACAACTTAGAATTGACCTTTTTGGTCAGACCTGGTGGCTGAGATTTTTCCATTACAACTTAGAATaGACCTTTTTGGTCAGACCT | + |
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Preference number: 5 (lower is better) Translates to: TLQLRIDLFGQTWWLRFFHYNLE*TFLVRP Trigger: AGGTCTGACCAAAAAGGTCAATTCTAAGTTGTAATG...GAAAAATCTCAGCCACCAGGTCTGACCAAAAAGGTCAATTCTAAGTTGTAATGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| CDS-3UTR CAA 90 bp | AGTCTAATACACTTGATTTTTCTAAGCCAGGTCAAGTTAGGATTGACAGTTACTATTGACAGTTACTTTTaGTGGGAAGAGAGGAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: SLIHLIFLSQVKLGLTVTIDSYF*WEERSE Trigger: CTCACTCCTCTCTTCCCACAAAAAGTAACTGTCAAT...AGTAACTGTCAATCCTAACTTGACCTGGCTTAGAAAAATCAAGTGTATTAGACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| CDS-3UTR CAA 90 bp | AGTCTAATACACTTGATTTTTCTAAGCCAGGTCAAGTTAGGATTGACAGTTACTCAGGTCAAGTTAGGATaGACAGTTACTTTTTGTGGG | + |
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Preference number: 5 (lower is better) Translates to: SLIHLIFLSQVKLGLTVTQVKLG*TVTFCG Trigger: CCCACAAAAAGTAACTGTCAATCCTAACTTGACCTG...AGTAACTGTCAATCCTAACTTGACCTGGCTTAGAAAAATCAAGTGTATTAGACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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| CDS-3UTR CAA 90 bp | AGTCTAATACACTTGATTTTTCTAAGCCAGGTCAAGTTAGGATTGACAGTTACTTTCAGTCTAATACACTaGATTTTTCTAAGCCAGGTC | + |
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Preference number: 5 (lower is better) Translates to: SLIHLIFLSQVKLGLTVTFSLIH*IFLSQV Trigger: GACCTGGCTTAGAAAAATCAAGTGTATTAGACTGAA...AGTAACTGTCAATCCTAACTTGACCTGGCTTAGAAAAATCAAGTGTATTAGACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000408939.4 |
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