Pregenerated sensors for TTC3 (Homo sapiens)
Ensembl gene IDs: ENSG00000182670Ensembl transcript IDs: ENST00000354749.6, ENST00000399010.5, ENST00000399017.6, ENST00000411496.1, ENST00000479930.5, ENST00000484047.5, ENST00000488522.1, ENST00000494243.5
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGTGTGCCTCTCAGCTCTCAGAAGTGGAAAGTGGAAAACCTTCTaGCAGGCAATATTTCAGACAGGCACCTCAATTTTCACAAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: LVCLSALRSGKWKTF*QAIFQTGTSIFTRG Trigger: GCCTCTTGTGAAAATTGAGGTGCCTGTCTGAAATATTGCCTGGCAGAAGGTTTTCCACTTTCCACTTCTGAGAGCTGAGAGGCACACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| 3UTR CCA 90 bp | AGCTGCTCAGCCAGATTTCCACAGCAGATCCAGCATCCCTCTGCTTaGGAGCTTCAAAACATCTTAATCTCAGTAACTCAGATAAAAGTC | + |
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Preference number: 1 (lower is better) Translates to: SCSARFPQQIQHPSA*ELQNILISVTQIKV Trigger: GACTTTTATCTGAGTTACTGAGATTAAGATGTTTTGAAGCTCCCAAGCAGAGGGATGCTGGATCTGCTGTGGAAATCTGGCTGAGCAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| 3UTR TCA 90 bp | TTGGCCTTTACCTCACCAAACTACCTAGCTTCTGTACTTCTACTCTaGTTCACCTCCTGTTGCAGCAAGGTATTAGAAGGATCTTCCTTG | + |
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Preference number: 1 (lower is better) Translates to: LAFTSPNYLASVLLL*FTSCCSKVLEGSSL Trigger: CAAGGAAGATCCTTCTAATACCTTGCTGCAACAGGAGGTGAATCAGAGTAGAAGTACAGAAGCTAGGTAGTTTGGTGAGGTAAAGGCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| 3UTR TCA 90 bp | TTACTGGCAACGTGTTCTTTCCTTAAGTCACACCATCTAGTCACCTaGTCAGGAGTTATATATACTATGGACTCTGAAAACATTATCCCT | + |
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Preference number: 1 (lower is better) Translates to: LLATCSFLKSHHLVT*SGVIYTMDSENIIP Trigger: AGGGATAATGTTTTCAGAGTCCATAGTATATATAACTCCTGATCAGGTGACTAGATGGTGTGACTTAAGGAAAGAACACGTTGCCAGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| 3UTR CAA 90 bp | CATGTGCAGCTCATTTCTTGTCAGAACCCGTTGAGGACAGTGGTATaGATGGAAGACTGTGTCAAGCCCATCCATTCCTCTAGTCTAGAT | + |
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Preference number: 2 (lower is better) Translates to: HVQLISCQNPLRTVV*MEDCVKPIHSSSLD Trigger: ATCTAGACTAGAGGAATGGATGGGCTTGACACAGTCTTCCATCAATACCACTGTCCTCAACGGGTTCTGACAAGAAATGAGCTGCACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| 3UTR CAA 90 bp | GACCTAGCCAGTAGCAATAACCTAAAGACATGTGCAGCTCATTTCTaGTCAGAACCCGTTGAGGACAGTGGTATTGATGGAAGACTGTGT | + |
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Preference number: 2 (lower is better) Translates to: DLASSNNLKTCAAHF*SEPVEDSGIDGRLC Trigger: ACACAGTCTTCCATCAATACCACTGTCCTCAACGGGTTCTGACAAGAAATGAGCTGCACATGTCTTTAGGTTATTGCTACTGGCTAGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| 3UTR CAA 90 bp | CAGCTGCTCAGCCAGATTTCCACAGCAGATCCAGCATCCCTCTGCTaGGGAGCTTCAAAACATCTTAATCTCAGTAACTCAGATAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: QLLSQISTADPASLC*GASKHLNLSNSDKS Trigger: ACTTTTATCTGAGTTACTGAGATTAAGATGTTTTGAAGCTCCCAAGCAGAGGGATGCTGGATCTGCTGTGGAAATCTGGCTGAGCAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| 3UTR CAA 90 bp | ACCAAACTACCTAGCTTCTGTACTTCTACTCTGATTCACCTCCTGTaGCAGCAAGGTATTAGAAGGATCTTCCTTGTGTGTCTAGCATTC | + |
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Preference number: 2 (lower is better) Translates to: TKLPSFCTSTLIHLL*QQGIRRIFLVCLAF Trigger: GAATGCTAGACACACAAGGAAGATCCTTCTAATACCTTGCTGCAACAGGAGGTGAATCAGAGTAGAAGTACAGAAGCTAGGTAGTTTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| 3UTR-3UTR TCA 90 bp | ATTTCCACAGCAGATCCAGCATCCCTCTGCTTGGGAGCTTCAAAACATCTTAATCACCATCTAGTCACCTaGTCAGGAGTTATATATACT | + |
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Preference number: 2 (lower is better) Translates to: ISTADPASLCLGASKHLNHHLVT*SGVIYT Trigger: AGTATATATAACTCCTGATCAGGTGACTAGATGGTG...ATTAAGATGTTTTGAAGCTCCCAAGCAGAGGGATGCTGGATCTGCTGTGGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| 3UTR-3UTR GCA 90 bp | AGTGGAAAACCTTCTGCCAGGCAATATTTCAGACAGGCACCTCAATTTTCACAAACAGCACAAAATAAATaGAATTCTGGACCTAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: SGKPSARQYFRQAPQFSQTAQNK*NSGPSQ Trigger: CTGGCTAGGTCCAGAATTGCATTTATTTTGTGCTGT...TTGTGAAAATTGAGGTGCCTGTCTGAAATATTGCCTGGCAGAAGGTTTTCCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| 3UTR-3UTR CCA 90 bp | CATCCCTCTGCTTGGGAGCTTCAAAACATCTTAATCTCAGTAACTCAGATAAAACTCAGCTCTCAGAAGTaGAAAGTGGAAAACCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: HPSAWELQNILISVTQIKLSSQK*KVENLL Trigger: CAGAAGGTTTTCCACTTTCCACTTCTGAGAGCTGAG...TTTTATCTGAGTTACTGAGATTAAGATGTTTTGAAGCTCCCAAGCAGAGGGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| 3UTR-3UTR CAA 90 bp | AACCTTCTGCCAGGCAATATTTCAGACAGGCACCTCAATTTTCACAAGAGGCTATGTGCAGCTCATTTCTaGTCAGAACCCGTTGAGGAC | + |
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Preference number: 3 (lower is better) Translates to: NLLPGNISDRHLNFHKRLCAAHF*SEPVED Trigger: GTCCTCAACGGGTTCTGACAAGAAATGAGCTGCACA...TAGCCTCTTGTGAAAATTGAGGTGCCTGTCTGAAATATTGCCTGGCAGAAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| 3UTR GCA 72 bp | CTCAGCCAGATTTCCACAGCAGATCCAGCATCCCTCTaGTTGGGAGCTTCAAAACATCTTAATCTCAGTAAC | + |
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Preference number: 3 (lower is better) Translates to: LSQISTADPASL*LGASKHLNLSN Trigger: GTTACTGAGATTAAGATGTTTTGAAGCTCCCAAGCAGAGGGATGCTGGATCTGCTGTGGAAATCTGGCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| 3UTR CCA 72 bp | GCCAGATTTCCACAGCAGATCCAGCATCCCTCTGCTTaGGAGCTTCAAAACATCTTAATCTCAGTAACTCAG | + |
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Preference number: 3 (lower is better) Translates to: ARFPQQIQHPSA*ELQNILISVTQ Trigger: CTGAGTTACTGAGATTAAGATGTTTTGAAGCTCCCAAGCAGAGGGATGCTGGATCTGCTGTGGAAATCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| 3UTR GCA 72 bp | CTCTCAGCTCTCAGAAGTGGAAAGTGGAAAACCTTCTaGCAGGCAATATTTCAGACAGGCACCTCAATTTTC | + |
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Preference number: 3 (lower is better) Translates to: LSALRSGKWKTF*QAIFQTGTSIF Trigger: GAAAATTGAGGTGCCTGTCTGAAATATTGCCTGGCAGAAGGTTTTCCACTTTCCACTTCTGAGAGCTGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| 3UTR-3UTR CAA 90 bp | AACCTTCTGCCAGGCAATATTTCAGACAGGCACCTCAATTTTCACAAGAGGCTATTGAGGACAGTGGTATaGATGGAAGACTGTGTCAAG | + |
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Preference number: 3 (lower is better) Translates to: NLLPGNISDRHLNFHKRLLRTVV*MEDCVK Trigger: CTTGACACAGTCTTCCATCAATACCACTGTCCTCAA...TAGCCTCTTGTGAAAATTGAGGTGCCTGTCTGAAATATTGCCTGGCAGAAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| CDS-3UTR TCA 90 bp | GGCAATATTTCAGACAGGCACCTCAATTTTCACAAGAGGCTAGCCAAGTTGCCAGCCTTCCAGAACAGCTaGGGAGTGCATCCTCGCCAA | + |
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Preference number: 4 (lower is better) Translates to: GNISDRHLNFHKRLAKLPAFQNS*GVHPRQ Trigger: TTGGCGAGGATGCACTCCTCAGCTGTTCTGGAAGGC...TGGCAACTTGGCTAGCCTCTTGTGAAAATTGAGGTGCCTGTCTGAAATATTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| CDS-3UTR GCA 90 bp | CAGCTCATTTCTTGTCAGAACCCGTTGAGGACAGTGGTATTGATGGAAGACTGTAGCTGTCCCTGCAGCTaGTCAGCCAGATTTCCACAG | + |
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Preference number: 4 (lower is better) Translates to: QLISCQNPLRTVVLMEDCSCPCS*SARFPQ Trigger: CTGTGGAAATCTGGCTGAGCAGCTGCAGGGACAGCT...ACAGTCTTCCATCAATACCACTGTCCTCAACGGGTTCTGACAAGAAATGAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| CDS-3UTR GCA 90 bp | GGCACATCTGAATTACTGGCAACGTGTTCTTTCCTTAAGTCACACCATCTAGTCACCCCCAGCTGTCCCTaGAGCTGCTCAGCCAGATTT | + |
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Preference number: 4 (lower is better) Translates to: GTSELLATCSFLKSHHLVTPSCP*SCSARF Trigger: AAATCTGGCTGAGCAGCTGCAGGGACAGCTGGGGGT...GACTAGATGGTGTGACTTAAGGAAAGAACACGTTGCCAGTAATTCAGATGTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| CDS-3UTR GCA 90 bp | AGTGGAAAACCTTCTGCCAGGCAATATTTCAGACAGGCACCTCAATTTTCACAACAAAATTGTCCATGGTaGACAAGTCCGGGCCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: SGKPSARQYFRQAPQFSQQNCPW*TSPGPP Trigger: CGGCGGGCCCGGACTTGTGCACCATGGACAATTTTG...TTGTGAAAATTGAGGTGCCTGTCTGAAATATTGCCTGGCAGAAGGTTTTCCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| CDS-3UTR GCA 90 bp | CAAGGAGGTACAAGGATAGATCCACAAGCTGCTCTTGGCCTTTACCTCACCAAAGATCCAGCATCCCTCTaGTTGGGAGCTTCAAAACAT | + |
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Preference number: 4 (lower is better) Translates to: QGGTRIDPQAALGLYLTKDPASL*LGASKH Trigger: ATGTTTTGAAGCTCCCAAGCAGAGGGATGCTGGATC...TTTGGTGAGGTAAAGGCCAAGAGCAGCTTGTGGATCTATCCTTGTACCTCCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| CDS-3UTR CCA 90 bp | GGCACATCTGAATTACTGGCAACGTGTTCTTTCCTTAAGTCACACCATCTAGTCAAGCACGTGAATTGTTaGCGTCCACACAGGGATGCA | + |
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Preference number: 4 (lower is better) Translates to: GTSELLATCSFLKSHHLVKHVNC*RPHRDA Trigger: TGCATCCCTGTGTGGACGCCAACAATTCACGTGCTT...GACTAGATGGTGTGACTTAAGGAAAGAACACGTTGCCAGTAATTCAGATGTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| CDS-3UTR CCA 90 bp | CAGCTCATTTCTTGTCAGAACCCGTTGAGGACAGTGGTATTGATGGAAGACTGTTCCACAAGCTGCTCTTaGCCTTTACCTCACCAAACT | + |
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Preference number: 4 (lower is better) Translates to: QLISCQNPLRTVVLMEDCSTSCS*PLPHQT Trigger: AGTTTGGTGAGGTAAAGGCCAAGAGCAGCTTGTGGA...ACAGTCTTCCATCAATACCACTGTCCTCAACGGGTTCTGACAAGAAATGAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| 3UTR CAA 72 bp | CTCATTTCTTGTCAGAACCCGTTGAGGACAGTGGTATaGATGGAAGACTGTGTCAAGCCCATCCATTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LISCQNPLRTVV*MEDCVKPIHSS Trigger: AGAGGAATGGATGGGCTTGACACAGTCTTCCATCAATACCACTGTCCTCAACGGGTTCTGACAAGAAATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| CDS-3UTR TCA 90 bp | ACAGTGGTATTGATGGAAGACTGTGTCAAGCCCATCCATTCCTCTAGTCTAGATTATCTCAGAAGCACGTaGATTGTTGGCGTCCACACA | + |
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Preference number: 4 (lower is better) Translates to: TVVLMEDCVKPIHSSSLDYLRST*IVGVHT Trigger: TGTGTGGACGCCAACAATTCACGTGCTTCTGAGATA...ATCTAGACTAGAGGAATGGATGGGCTTGACACAGTCTTCCATCAATACCACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| CDS-3UTR CCA 90 bp | GGCAATATTTCAGACAGGCACCTCAATTTTCACAAGAGGCTAGCCAAGTTGCCACAGCATCCCTCTGCTTaGGAGCTTCAAAACATCTTA | + |
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Preference number: 4 (lower is better) Translates to: GNISDRHLNFHKRLAKLPQHPSA*ELQNIL Trigger: TAAGATGTTTTGAAGCTCCCAAGCAGAGGGATGCTG...TGGCAACTTGGCTAGCCTCTTGTGAAAATTGAGGTGCCTGTCTGAAATATTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| 3UTR CAA 72 bp | AGCCAGATTTCCACAGCAGATCCAGCATCCCTCTGCTaGGGAGCTTCAAAACATCTTAATCTCAGTAACTCA | + |
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Preference number: 4 (lower is better) Translates to: SQISTADPASLC*GASKHLNLSNS Trigger: TGAGTTACTGAGATTAAGATGTTTTGAAGCTCCCAAGCAGAGGGATGCTGGATCTGCTGTGGAAATCTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| CDS-3UTR TCA 90 bp | AACCTTCTGCCAGGCAATATTTCAGACAGGCACCTCAATTTTCACAAGAGGCTACATATAGACAATGTGTaGGGAGGTAGGAAACACCAG | + |
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Preference number: 4 (lower is better) Translates to: NLLPGNISDRHLNFHKRLHIDNV*GGRKHQ Trigger: CTGGTGTTTCCTACCTCCTCACACATTGTCTATATG...TAGCCTCTTGTGAAAATTGAGGTGCCTGTCTGAAATATTGCCTGGCAGAAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| 3UTR CAA 72 bp | CCTAGCTTCTGTACTTCTACTCTGATTCACCTCCTGTaGCAGCAAGGTATTAGAAGGATCTTCCTTGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: PSFCTSTLIHLL*QQGIRRIFLVC Trigger: ACACACAAGGAAGATCCTTCTAATACCTTGCTGCAACAGGAGGTGAATCAGAGTAGAAGTACAGAAGCTAGG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| CDS-3UTR TCA 90 bp | ATTAGAAGGATCTTCCTTGTGTGTCTAGCATTCAACACTCATGAAAGAGAGCAGAAGGAACAATGCTGCTaGCCTGGCTTTAGTGAAATG | + |
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Preference number: 4 (lower is better) Translates to: IRRIFLVCLAFNTHEREQKEQCC*PGFSEM Trigger: CATTTCACTAAAGCCAGGTCAGCAGCATTGTTCCTT...CTGCTCTCTTTCATGAGTGTTGAATGCTAGACACACAAGGAAGATCCTTCTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| CDS-3UTR CCA 90 bp | CATCCCTCTGCTTGGGAGCTTCAAAACATCTTAATCTCAGTAACTCAGATAAAAATTCTCCAAGGTGGTTaGATTACTGGTGATTTTTAT | + |
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Preference number: 4 (lower is better) Translates to: HPSAWELQNILISVTQIKILQGG*ITGDFY Trigger: ATAAAAATCACCAGTAATCCAACCACCTTGGAGAAT...TTTTATCTGAGTTACTGAGATTAAGATGTTTTGAAGCTCCCAAGCAGAGGGATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| CDS-3UTR CAA 90 bp | AGACCATCAGCAAGGAGGTACAAGGATAGATCCACAAGCTGCTCTTGGCCTTTAGAAGCACGTGAATTGTaGGCGTCCACACAGGGATGC | + |
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Preference number: 5 (lower is better) Translates to: RPSARRYKDRSTSCSWPLEAREL*ASTQGC Trigger: GCATCCCTGTGTGGACGCCAACAATTCACGTGCTTC...TAAAGGCCAAGAGCAGCTTGTGGATCTATCCTTGTACCTCCTTGCTGATGGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| CDS-3UTR CAA 90 bp | GGCAATATTTCAGACAGGCACCTCAATTTTCACAAGAGGCTAGCCAAGTTGCCATCAGAAGCACGTGAATaGTTGGCGTCCACACAGGGA | + |
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Preference number: 5 (lower is better) Translates to: GNISDRHLNFHKRLAKLPSEARE*LASTQG Trigger: TCCCTGTGTGGACGCCAACAATTCACGTGCTTCTGA...TGGCAACTTGGCTAGCCTCTTGTGAAAATTGAGGTGCCTGTCTGAAATATTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| CDS-3UTR CAA 90 bp | CAAGGAGGTACAAGGATAGATCCACAAGCTGCTCTTGGCCTTTACCTCACCAAATGTGCAGCTCATTTCTaGTCAGAACCCGTTGAGGAC | + |
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Preference number: 5 (lower is better) Translates to: QGGTRIDPQAALGLYLTKCAAHF*SEPVED Trigger: GTCCTCAACGGGTTCTGACAAGAAATGAGCTGCACA...TTTGGTGAGGTAAAGGCCAAGAGCAGCTTGTGGATCTATCCTTGTACCTCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| CDS-3UTR CAA 90 bp | CTCAGCTCTCAGAAGTGGAAAGTGGAAAACCTTCTGCCAGGCAATATTTCAGACCTGATTCACCTCCTGTaGCAGCAAGGTATTAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: LSSQKWKVENLLPGNISDLIHLL*QQGIRR Trigger: CCTTCTAATACCTTGCTGCAACAGGAGGTGAATCAG...GTCTGAAATATTGCCTGGCAGAAGGTTTTCCACTTTCCACTTCTGAGAGCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| CDS-3UTR CAA 90 bp | ATTTCCACAGCAGATCCAGCATCCCTCTGCTTGGGAGCTTCAAAACATCTTAATATCCACAAGCTGCTCTaGGCCTTTACCTCACCAAAC | + |
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Preference number: 5 (lower is better) Translates to: ISTADPASLCLGASKHLNIHKLL*AFTSPN Trigger: GTTTGGTGAGGTAAAGGCCAAGAGCAGCTTGTGGAT...ATTAAGATGTTTTGAAGCTCCCAAGCAGAGGGATGCTGGATCTGCTGTGGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| CDS-3UTR CAA 90 bp | ATTTCCACAGCAGATCCAGCATCCCTCTGCTTGGGAGCTTCAAAACATCTTAATCCAGCATCCCTCTGCTaGGGAGCTTCAAAACATCTT | + |
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Preference number: 5 (lower is better) Translates to: ISTADPASLCLGASKHLNPASLC*GASKHL Trigger: AAGATGTTTTGAAGCTCCCAAGCAGAGGGATGCTGG...ATTAAGATGTTTTGAAGCTCCCAAGCAGAGGGATGCTGGATCTGCTGTGGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| CDS GCA 90 bp | TGGCCTAACCTAAATCCTGACTCCACTGAGAACTTTCCTATCAACTaGTCATATTCTCCTATCCATCTCAGTGTGTTTCTGTCTTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: WPNLNPDSTENFPIN*SYSPIHLSVFLSWA Trigger: TGCCCAAGACAGAAACACACTGAGATGGATAGGAGAATATGAGCAGTTGATAGGAAAGTTCTCAGTGGAGTCAGGATTTAGGTTAGGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000354749.6 ENST00000479930.5 |
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| CDS-3UTR CAA 90 bp | GGCACATCTGAATTACTGGCAACGTGTTCTTTCCTTAAGTCACACCATCTAGTCTTGAGGACAGTGGTATaGATGGAAGACTGTGTCAAG | + |
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Preference number: 5 (lower is better) Translates to: GTSELLATCSFLKSHHLVLRTVV*MEDCVK Trigger: CTTGACACAGTCTTCCATCAATACCACTGTCCTCAA...GACTAGATGGTGTGACTTAAGGAAAGAACACGTTGCCAGTAATTCAGATGTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| CDS CCA 90 bp | TTCACATTGTTTGACCATCACAGGTTTATCTCTGCAGGGTCACTATaGATCCAGAGGATATATTGTGCAATCCATTTGCCATCTGTACTG | + |
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Preference number: 5 (lower is better) Translates to: FTLFDHHRFISAGSL*IQRIYCAIHLPSVL Trigger: CAGTACAGATGGCAAATGGATTGCACAATATATCCTCTGGATCCATAGTGACCCTGCAGAGATAAACCTGTGATGGTCAAACAATGTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399017.6 |
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| CDS CCA 90 bp | GGAGTCAACCTAGACTCCCCAGTCTCCTTCAATATTTCTGTCCAATaGACCACTAACTCTTGTCATTTCTGCTTCCCTAAGAAATCTAAA | + |
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Preference number: 5 (lower is better) Translates to: GVNLDSPVSFNISVQ*TTNSCHFCFPKKSK Trigger: TTTAGATTTCTTAGGGAAGCAGAAATGACAAGAGTTAGTGGTCCATTGGACAGAAATATTGAAGGAGACTGGGGAGTCTAGGTTGACTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399017.6 |
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| CDS-3UTR CAA 90 bp | CTCAGCTCTCAGAAGTGGAAAGTGGAAAACCTTCTGCCAGGCAATATTTCAGACCCTATTCATCTGATCTaGAAAGCATACAAATTCACC | + |
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Preference number: 5 (lower is better) Translates to: LSSQKWKVENLLPGNISDPIHLI*KAYKFT Trigger: GGTGAATTTGTATGCTTTCAAGATCAGATGAATAGG...GTCTGAAATATTGCCTGGCAGAAGGTTTTCCACTTTCCACTTCTGAGAGCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399010.5 |
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| CDS GCA 90 bp | CAGGTTTATCTCTGCAGGGTCACTATGGATCCAGAGGATATATTGTaGAATCCATTTGCCATCTGTACTGCTATTTACTTAATACTTTTC | + |
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Preference number: 5 (lower is better) Translates to: QVYLCRVTMDPEDIL*NPFAICTAIYLILF Trigger: GAAAAGTATTAAGTAAATAGCAGTACAGATGGCAAATGGATTGCACAATATATCCTCTGGATCCATAGTGACCCTGCAGAGATAAACCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399017.6 |
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| CDS TCA 90 bp | TTCCTGTTGCTGCACTTGTACCCTACCTGCTTTTACTGCATTCTGTaGAATATGCCATTTCATCATACACAAACTGTTATATTCTCAATC | + |
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Preference number: 5 (lower is better) Translates to: FLLLHLYPTCFYCIL*NMPFHHTQTVIFSI Trigger: GATTGAGAATATAACAGTTTGTGTATGATGAAATGGCATATTTCACAGAATGCAGTAAAAGCAGGTAGGGTACAAGTGCAGCAACAGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354749.6 ENST00000479930.5 |
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| CDS CCA 90 bp | AATATGCCATTTCATCATACACAAACTGTTATATTCTCAATCTCCTaGCCTAACCTAAATCCTGACTCCACTGAGAACTTTCCTATCAAC | + |
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Preference number: 5 (lower is better) Translates to: NMPFHHTQTVIFSIS*PNLNPDSTENFPIN Trigger: GTTGATAGGAAAGTTCTCAGTGGAGTCAGGATTTAGGTTAGGCCAGGAGATTGAGAATATAACAGTTTGTGTATGATGAAATGGCATATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000354749.6 ENST00000479930.5 |
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| CDS CCA 90 bp | TCTATGTACCAGTTTAAATTATCTCATATGCACTGCAGTAAACAATaGCTTCCAAAATTCCAAATGCTGAAGACTCCCAAATCCTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: SMYQFKLSHMHCSKQ*LPKFQMLKTPKSFQ Trigger: CTGGAAGGATTTGGGAGTCTTCAGCATTTGGAATTTTGGAAGCCATTGTTTACTGCAGTGCATATGAGATAATTTAAACTGGTACATAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399017.6 ENST00000484047.5 |
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| CDS GCA 90 bp | CTTAACACAGTACAGCGGCTGTTAATAGATTCTGTCAGTGTAACATaGAATCTTTCCCATGATGCTGTGAAAATATCCATTATATCAAAG | + |
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Preference number: 5 (lower is better) Translates to: LNTVQRLLIDSVSVT*NLSHDAVKISIISK Trigger: CTTTGATATAATGGATATTTTCACAGCATCATGGGAAAGATTGCATGTTACACTGACAGAATCTATTAACAGCCGCTGTACTGTGTTAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000411496.1 |
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| CDS CCA 72 bp | CAGGGAGTAACTCGGGATGAACCCTCAACTCCCACGTaGACACATGGGGCCTGGTCTCCTGAGCAGCATGGC | + |
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Preference number: 6 (lower is better) Translates to: QGVTRDEPSTPT*THGAWSPEQHG Trigger: GCCATGCTGCTCAGGAGACCAGGCCCCATGTGTCCACGTGGGAGTTGAGGGTTCATCCCGAGTTACTCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488522.1 |
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| CDS CAA 72 bp | GACGCTGTGGACCACTTCCTCCTCAGAACTCTTCATTaGGACTCCAAAGACCATCTTCTCCTGGTTTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: DAVDHFLLRTLH*DSKDHLLLVFL Trigger: GAGGAAAACCAGGAGAAGATGGTCTTTGGAGTCCAAATGAAGAGTTCTGAGGAGGAAGTGGTCCACAGCGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399017.6 ENST00000484047.5 |
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| CDS CAA 90 bp | TATCAACTGCTCATATTCTCCTATCCATCTCAGTGTGTTTCTGTCTaGGGCAAAGGAGTAGGGCTAGAGTGGTACAGGGTAAGTCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: YQLLIFSYPSQCVSV*GKGVGLEWYRVSLP Trigger: TGGCAGACTTACCCTGTACCACTCTAGCCCTACTCCTTTGCCCAAGACAGAAACACACTGAGATGGATAGGAGAATATGAGCAGTTGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000354749.6 ENST00000479930.5 |
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| CDS TCA 72 bp | TCATGCCCAGTGCCACTGCCTTCACTGTTTCTCCTCTaGACTAATTTAACAAGCAGTCTCCTAACTGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: SCPVPLPSLFLL*TNLTSSLLTGQ Trigger: CTGACCAGTTAGGAGACTGCTTGTTAAATTAGTTCAGAGGAGAAACAGTGAAGGCAGTGGCACTGGGCATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399017.6 |
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| CDS CAA 72 bp | CTCATATTCTCCTATCCATCTCAGTGTGTTTCTGTCTaGGGCAAAGGAGTAGGGCTAGAGTGGTACAGGGTA | + |
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Preference number: 6 (lower is better) Translates to: LIFSYPSQCVSV*GKGVGLEWYRV Trigger: TACCCTGTACCACTCTAGCCCTACTCCTTTGCCCAAGACAGAAACACACTGAGATGGATAGGAGAATATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000354749.6 ENST00000479930.5 |
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| CDS TCA 72 bp | ACTGCAGTAAACAATGGCTTCCAAAATTCCAAATGCTaGAGACTCCCAAATCCTTCCAGGCGGGGTTGTATC | + |
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Preference number: 6 (lower is better) Translates to: TAVNNGFQNSKC*RLPNPSRRGCI Trigger: GATACAACCCCGCCTGGAAGGATTTGGGAGTCTTCAGCATTTGGAATTTTGGAAGCCATTGTTTACTGCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399017.6 ENST00000484047.5 |
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| CDS GCA 72 bp | CTCCCCTTCACTCAGCTTTTCATTGTTATCTCTAAGTaGAGCTCCTGGCTTTGGCCAAGTGTTCTTCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: LPFTQLFIVISK*SSWLWPSVLQN Trigger: ATTCTGAAGAACACTTGGCCAAAGCCAGGAGCTGCACTTAGAGATAACAATGAAAAGCTGAGTGAAGGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494243.5 |
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| CDS CAA 90 bp | GCCACCCAATGTCAACTCTCTTTTCTTCTCACTCTTACTCTCTCCTaGGGTGAATTTATCCACCACACCCATGACTTAACACAGCACTTT | + |
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Preference number: 6 (lower is better) Translates to: ATQCQLSFLLTLTLS*GEFIHHTHDLTQHF Trigger: AAAGTGCTGTGTTAAGTCATGGGTGTGGTGGATAAATTCACCCAAGGAGAGAGTAAGAGTGAGAAGAAAAGAGAGTTGACATTGGGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399017.6 ENST00000484047.5 |
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| CDS TCA 72 bp | GGAAGCAATATATTGCTTCTCTATGGCATATCTGATTaGCCAGCATCATTACTCCCATGCTTTGGGGCCATT | + |
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Preference number: 6 (lower is better) Translates to: GSNILLLYGISD*PASLLPCFGAI Trigger: AATGGCCCCAAAGCATGGGAGTAATGATGCTGGTCAATCAGATATGCCATAGAGAAGCAATATATTGCTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488522.1 |
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| CDS CCA 72 bp | CTTCTGATCCCATCAGTTATGGTCAACTATACACTCTaGGGGAATGTACTGTTGGGAGGAAAAAGGTATATC | + |
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Preference number: 6 (lower is better) Translates to: LLIPSVMVNYTL*GNVLLGGKRYI Trigger: GATATACCTTTTTCCTCCCAACAGTACATTCCCCCAGAGTGTATAGTTGACCATAACTGATGGGATCAGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399017.6 |
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| CDS CCA 72 bp | TTTGACCATCACAGGTTTATCTCTGCAGGGTCACTATaGATCCAGAGGATATATTGTGCAATCCATTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: FDHHRFISAGSL*IQRIYCAIHLP Trigger: TGGCAAATGGATTGCACAATATATCCTCTGGATCCATAGTGACCCTGCAGAGATAAACCTGTGATGGTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399017.6 |
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| CDS CAA 72 bp | CAGGAAGCATTTCCTGATCTTCCCACTACCATCAAGTaGATTTTTGCACCTCTTCTCTGTAAACAAGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: QEAFPDLPTTIK*IFAPLLCKQEH Trigger: GTGCTCTTGTTTACAGAGAAGAGGTGCAAAAATCAACTTGATGGTAGTGGGAAGATCAGGAAATGCTTCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399017.6 |
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| CDS GCA 72 bp | CTAAATCCTGACTCCACTGAGAACTTTCCTATCAACTaGTCATATTCTCCTATCCATCTCAGTGTGTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: LNPDSTENFPIN*SYSPIHLSVFL Trigger: CAGAAACACACTGAGATGGATAGGAGAATATGAGCAGTTGATAGGAAAGTTCTCAGTGGAGTCAGGATTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000354749.6 ENST00000479930.5 |
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| CDS GCA 72 bp | CTCTGCAGGGTCACTATGGATCCAGAGGATATATTGTaGAATCCATTTGCCATCTGTACTGCTATTTACTTA | + |
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Preference number: 6 (lower is better) Translates to: LCRVTMDPEDIL*NPFAICTAIYL Trigger: TAAGTAAATAGCAGTACAGATGGCAAATGGATTGCACAATATATCCTCTGGATCCATAGTGACCCTGCAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399017.6 |
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| CDS CAA 72 bp | TATCTCTGCAGGGTCACTATGGATCCAGAGGATATATaGTGCAATCCATTTGCCATCTGTACTGCTATTTAC | + |
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Preference number: 6 (lower is better) Translates to: YLCRVTMDPEDI*CNPFAICTAIY Trigger: GTAAATAGCAGTACAGATGGCAAATGGATTGCACAATATATCCTCTGGATCCATAGTGACCCTGCAGAGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399017.6 |
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| CDS CAA 72 bp | AAGCAGTCTCCTAACTGGTCAGACTTGCCTTCAATCTaGGCATCCTCTAAAACTCTGATCATATCACTTTAC | + |
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Preference number: 6 (lower is better) Translates to: KQSPNWSDLPSI*ASSKTLIISLY Trigger: GTAAAGTGATATGATCAGAGTTTTAGAGGATGCCAAGATTGAAGGCAAGTCTGACCAGTTAGGAGACTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399017.6 |
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| CDS TCA 72 bp | TCCCCCTCCTCAAGGATATCAGACATTGGGAATGTCTaGTATAGTCTACAGAATAGCTATAGAGTCACAAAA | + |
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Preference number: 6 (lower is better) Translates to: SPSSRISDIGNV*YSLQNSYRVTK Trigger: TTTTGTGACTCTATAGCTATTCTGTAGACTATATCAGACATTCCCAATGTCTGATATCCTTGAGGAGGGGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399017.6 |
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| CDS CAA 90 bp | TCACAGGTTTATCTCTGCAGGGTCACTATGGATCCAGAGGATATATaGTGCAATCCATTTGCCATCTGTACTGCTATTTACTTAATACTT | + |
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Preference number: 6 (lower is better) Translates to: SQVYLCRVTMDPEDI*CNPFAICTAIYLIL Trigger: AAGTATTAAGTAAATAGCAGTACAGATGGCAAATGGATTGCACAATATATCCTCTGGATCCATAGTGACCCTGCAGAGATAAACCTGTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399017.6 |
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| CDS GCA 72 bp | TACAGATGGGAAAATGCTCACTTAAATCAAGTAATTTaGTCATGTCACCAAGCTAGGAAGGATTCAAATCCA | + |
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Preference number: 6 (lower is better) Translates to: YRWENAHLNQVI*SCHQARKDSNP Trigger: TGGATTTGAATCCTTCCTAGCTTGGTGACATGAGCAAATTACTTGATTTAAGTGAGCATTTTCCCATCTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354749.6 ENST00000479930.5 |
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| CDS CCA 72 bp | TTTCATCATACACAAACTGTTATATTCTCAATCTCCTaGCCTAACCTAAATCCTGACTCCACTGAGAACTTT | + |
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Preference number: 6 (lower is better) Translates to: FHHTQTVIFSIS*PNLNPDSTENF Trigger: AAAGTTCTCAGTGGAGTCAGGATTTAGGTTAGGCCAGGAGATTGAGAATATAACAGTTTGTGTATGATGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000354749.6 ENST00000479930.5 |
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| CDS GCA 72 bp | ACAATTATCGTTATCTCCACTGTACAGATGGGAAAATaGTCACTTAAATCAAGTAATTTGCTCATGTCACCA | + |
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Preference number: 6 (lower is better) Translates to: TIIVISTVQMGK*SLKSSNLLMSP Trigger: TGGTGACATGAGCAAATTACTTGATTTAAGTGAGCATTTTCCCATCTGTACAGTGGAGATAACGATAATTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000354749.6 ENST00000479930.5 |
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| CDS CAA 72 bp | TTCCTATCATCACCAGCGCATCATAAACACTATTACTaGTACCTATCACTTCACCATTATTATCCTACTATT | + |
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Preference number: 6 (lower is better) Translates to: FLSSPAHHKHYY*YLSLHHYYPTI Trigger: AATAGTAGGATAATAATGGTGAAGTGATAGGTACAAGTAATAGTGTTTATGATGCGCTGGTGATGATAGGAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000354749.6 ENST00000479930.5 |
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