RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTC28 (Homo sapiens)

Ensembl gene IDs: ENSG00000100154

Ensembl transcript IDs: ENST00000397906.6, ENST00000431039.1, ENST00000442232.1, ENST00000468807.1, ENST00000469670.1, ENST00000480563.1, ENST00000490475.1, ENST00000612946.4

Found 1241 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTaGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGA +
Preference number: 1 (lower is better)
Translates to: GPSGLLHVLLVAQAR*PPTFMRNPVVRWVG
Trigger: TCCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR TCA 90 bp GGCTGGGAGGTGGCAGAATCGGCACGGGCCAGGGACCGGCTGCAGTaGTCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGATGAG +
Preference number: 1 (lower is better)
Translates to: GWEVAESARARDRLQ*SYAGASLGQREQDE
Trigger: CTCATCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCCCTGGCCCGTGCCGATTCTGCCACCTCCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR GCA 90 bp TGTGTGGCTGGGAGGTGGCAGAATCGGCACGGGCCAGGGACCGGCTaGAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGG +
Preference number: 1 (lower is better)
Translates to: CVAGRWQNRHGPGTG*SDHMLERHWDRESR
Trigger: CCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCCCTGGCCCGTGCCGATTCTGCCACCTCCCAGCCACACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR CCA 90 bp TGGCCCAGAAAAGCCACCAGTGTGTGTGGCAGCCTTTGGACGTGGTaGTGCCCCTCGCCTGCAGAGCACAGCATCATGAGGGTGCTGGTG +
Preference number: 1 (lower is better)
Translates to: WPRKATSVCGSLWTW*CPSPAEHSIMRVLV
Trigger: CACCAGCACCCTCATGATGCTGTGCTCTGCAGGCGAGGGGCACCACCACGTCCAAAGGCTGCCACACACACTGGTGGCTTTTCTGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR GCA 90 bp TCCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTaGTTCCATCCACGTGGCCCTCACATACCCTGGGCTCCCCGGACG +
Preference number: 1 (lower is better)
Translates to: SSQVGQRAKGYAGGI*FHPRGPHIPWAPRT
Trigger: CGTCCGGGGAGCCCAGGGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR CCA 90 bp ATGTGGCCCAGAAAAGCCACCAGTGTGTGTGGCAGCCTTTGGACGTaGTGGTGCCCCTCGCCTGCAGAGCACAGCATCATGAGGGTGCTG +
Preference number: 1 (lower is better)
Translates to: MWPRKATSVCGSLWT*WCPSPAEHSIMRVL
Trigger: CAGCACCCTCATGATGCTGTGCTCTGCAGGCGAGGGGCACCACCACGTCCAAAGGCTGCCACACACACTGGTGGCTTTTCTGGGCCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR CCA 90 bp CACGGGCCAGGGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTaGGACAGAGAGAGCAGGATGAGGACAGCGTGGGTGACACCTTTG +
Preference number: 1 (lower is better)
Translates to: HGPGTGCSDHMLERH*DRESRMRTAWVTPL
Trigger: CAAAGGTGTCACCCACGCTGTCCTCATCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCCCTGGCCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR CCA 90 bp ACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTaGCCCTCACATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATC +
Preference number: 1 (lower is better)
Translates to: TKSQGLCRRHLLPST*PSHTLGSPDASQSI
Trigger: GATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR CCA 90 bp GCTACAGTTCTTCTTGTGGGTCTGCAAATGTGTGTGGCTGGGAGGTaGCAGAATCGGCACGGGCCAGGGACCGGCTGCAGTGATCATATG +
Preference number: 1 (lower is better)
Translates to: ATVLLVGLQMCVAGR*QNRHGPGTGCSDHM
Trigger: CATATGATCACTGCAGCCGGTCCCTGGCCCGTGCCGATTCTGCCACCTCCCAGCCACACACATTTGCAGACCCACAAGAAGAACTGTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR GCA 90 bp TACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCAAGGGCTATaGAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCCTG +
Preference number: 1 (lower is better)
Translates to: YIHGLLPSGTKSQGL*RRHLLPSTWPSHTL
Trigger: CAGGGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR CCA 90 bp AAATTATCAAGGCTACAGTTCTTCTTGTGGGTCTGCAAATGTGTGTaGCTGGGAGGTGGCAGAATCGGCACGGGCCAGGGACCGGCTGCA +
Preference number: 1 (lower is better)
Translates to: KLSRLQFFLWVCKCV*LGGGRIGTGQGPAA
Trigger: TGCAGCCGGTCCCTGGCCCGTGCCGATTCTGCCACCTCCCAGCCACACACATTTGCAGACCCACAAGAAGAACTGTAGCCTTGATAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR GCA 90 bp CAGCCTGAACTGAAATTATCAAGGCTACAGTTCTTCTTGTGGGTCTaGAAATGTGTGTGGCTGGGAGGTGGCAGAATCGGCACGGGCCAG +
Preference number: 1 (lower is better)
Translates to: QPELKLSRLQFFLWV*KCVWLGGGRIGTGQ
Trigger: CTGGCCCGTGCCGATTCTGCCACCTCCCAGCCACACACATTTGCAGACCCACAAGAAGAACTGTAGCCTTGATAATTTCAGTTCAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR CCA 90 bp GTTGACAGCGGGACCCAAAAGACATTTGCAGAGCAGAGTTCAGAATaGAAGCGCTGTTTCAATGTGAATTATTGCATTGTTGCTGAGATA +
Preference number: 1 (lower is better)
Translates to: VDSGTQKTFAEQSSE*KRCFNVNYCIVAEI
Trigger: TATCTCAGCAACAATGCAATAATTCACATTGAAACAGCGCTTCCATTCTGAACTCTGCTCTGCAAATGTCTTTTGGGTCCCGCTGTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR TCA 90 bp AGACATTTGCAGAGCAGAGTTCAGAATGGAAGCGCTGTTTCAATGTaGATTATTGCATTGTTGCTGAGATATTACACTATCATGAGACCA +
Preference number: 1 (lower is better)
Translates to: RHLQSRVQNGSAVSM*IIALLLRYYTIMRP
Trigger: TGGTCTCATGATAGTGTAATATCTCAGCAACAATGCAATAATTCACATTGAAACAGCGCTTCCATTCTGAACTCTGCTCTGCAAATGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR GCA 90 bp GCAGAGCAGAGTTCAGAATGGAAGCGCTGTTTCAATGTGAATTATTaGATTGTTGCTGAGATATTACACTATCATGAGACCAAAATTGCT +
Preference number: 1 (lower is better)
Translates to: AEQSSEWKRCFNVNY*IVAEILHYHETKIA
Trigger: AGCAATTTTGGTCTCATGATAGTGTAATATCTCAGCAACAATGCAATAATTCACATTGAAACAGCGCTTCCATTCTGAACTCTGCTCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR TCA 90 bp CTAAGAGAGGGACAGCCTAACCATCTGCATATGGATTTAGAAACTTaGGGTTTACTTTTCATTGTTAAGAACCTGATTTTGCTATCTAAT +
Preference number: 1 (lower is better)
Translates to: LREGQPNHLHMDLET*GLLFIVKNLILLSN
Trigger: ATTAGATAGCAAAATCAGGTTCTTAACAATGAAAAGTAAACCTCAAGTTTCTAAATCCATATGCAGATGGTTAGGCTGTCCCTCTCTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR GCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGGCTCACAGAGGCAGGTaGTGGGATTGTGGGGACCTG +
Preference number: 2 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVAHRGR*WDCGDL
Trigger: CAGGTCCCCACAATCCCAGCACCTGCCTCTGTGAGC...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGGGCAGCCTTTGGACGTaGTGGTGCCCCTCGCCTGCA +
Preference number: 2 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRGSLWT*WCPSPA
Trigger: TGCAGGCGAGGGGCACCACCACGTCCAAAGGCTGCC...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGGTGTGTGGCAGCCTTTaGACGTGGTGGTGCCCCTCG +
Preference number: 2 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRVCGSL*TWWCPS
Trigger: CGAGGGGCACCACCACGTCCAAAGGCTGCCACACAC...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGGCCCCACAGAAGTCCTaGCTTTTGGTGAATGTGGCC +
Preference number: 2 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVAPQKS*LLVNVA
Trigger: GGCCACATTCACCAAAAGCCAGGACTTCTGTGGGGC...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGGTGTGGCTTCAGCAGTaGGGGAGGGGCCAGTCCTTC +
Preference number: 2 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRVWLQQ*GRGQSF
Trigger: GAAGGACTGGCCCCTCCCCCACTGCTGAAGCCACAC...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR TCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGCAGAGCACAGCATCATaGGGGTGCTGGTGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRQSTAS*GCWWLW
Trigger: CCACAGCCACCAGCACCCTCATGATGCTGTGCTCTG...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGTGGCCCAGGCCAGGTaGCCGCCCACCTTCATGAGG +
Preference number: 2 (lower is better)
Translates to: GPAAVIICWSVTGTERAGVAQAR*PPTFMR
Trigger: CCTCATGAAGGTGGGCGGCCACCTGGCCTGGGCCAC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGGCCCTCACATACCCTaGGCTCCCCGGACGCCAGTC +
Preference number: 2 (lower is better)
Translates to: GPAAVIICWSVTGTERAGGPHIP*APRTPV
Trigger: GACTGGCGTCCGGGGAGCCCAGGGTATGTGAGGGCC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGAGCCACCAGTGTGTGTaGCAGCCTTTGGACGTGGTG +
Preference number: 2 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRSHQCV*QPLDVV
Trigger: CACCACGTCCAAAGGCTGCCACACACACTGGTGGCT...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR CAA 90 bp CTCCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTaGCTTCCATCCACGTGGCCCTCACATACCCTGGGCTCCCCGGAC +
Preference number: 2 (lower is better)
Translates to: LLPSGTKSQGLCRRH*LPSTWPSHTLGSPD
Trigger: GTCCGGGGAGCCCAGGGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR GCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGCCCCCATCTGCAGGCTaGTCAGAGTCAGTGGGTATA +
Preference number: 2 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRPPSAG*SESVGI
Trigger: TATACCCACTGACTCTGAGCAGCCTGCAGATGGGGG...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR TCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGAAATTCAAGTTTGGTTaGCAGCGGGACCCAAAAGAC +
Preference number: 2 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVKFKFG*QRDPKD
Trigger: GTCTTTTGGGTCCCGCTGTCAACCAAACTTGAATTT...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR GCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCCGCCAGGCCCCCATCTaGAGGCTGCTCAGAGTCAGT +
Preference number: 2 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTRQAPI*RLLRVS
Trigger: ACTGACTCTGAGCAGCCTGCAGATGGGGGCCTGGCG...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR GCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGTCTGCTCCATGTGCTaGTGGTGGCCCAGGCCAGGT +
Preference number: 2 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFVCSMC*WWPRPG
Trigger: ACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGAC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTAGCCTTTGGACGTGGTaGTGCCCCTCGCCTGCAGAG +
Preference number: 2 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFSLWTW*CPSPAE
Trigger: CTCTGCAGGCGAGGGGCACCACCACGTCCAAAGGCT...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAAGCCTTTGGACGTGGTaGTGCCCCTCGCCTGCAGAG +
Preference number: 2 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLSLWTW*CPSPAE
Trigger: CTCTGCAGGCGAGGGGCACCACCACGTCCAAAGGCT...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGTGTGTGGCAGCCTTTaGACGTGGTGGTGCCCCTCG +
Preference number: 2 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFVCGSL*TWWCPS
Trigger: CGAGGGGCACCACCACGTCCAAAGGCTGCCACACAC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR GCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGTGGTGCCCCTCGCCTaGAGAGCACAGCATCATGAG +
Preference number: 2 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFVVPLA*RAQHHE
Trigger: CTCATGATGCTGTGCTCTGCAGGCGAGGGGCACCAC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR GCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGTCTGCTCCATGTGCTaGTGGTGGCCCAGGCCAGGT +
Preference number: 2 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIVCSMC*WWPRPG
Trigger: ACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGAC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTCAGGAAGCGGCAGGGTaGTGGGGGTGTTTGCTAGAG +
Preference number: 2 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFQEAAG*WGCLLE
Trigger: CTCTAGCAAACACCCCCACCACCCTGCCGCTTCCTG...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR TCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCAGAGCACAGCATCATaGGGGTGCTGGTGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIQSTAS*GCWWLW
Trigger: CCACAGCCACCAGCACCCTCATGATGCTGTGCTCTG...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGAAGAAAATTCAAGTTTaGTTGACAGCGGGACCCAAA +
Preference number: 2 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVKKIQV*LTAGPK
Trigger: TTTGGGTCCCGCTGTCAACCAAACTTGAATTTTCTT...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCAGGAAGCGGCAGGGTaGTGGGGGTGTTTGCTAGAG +
Preference number: 2 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIQEAAG*WGCLLE
Trigger: CTCTAGCAAACACCCCCACCACCCTGCCGCTTCCTG...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR TCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAAGTCCTGGCTTTTGGTaGATGTGGCCCAGAAAAGCC +
Preference number: 2 (lower is better)
Translates to: GPAAVIICWSVTGTERAGSPGFW*MWPRKA
Trigger: GGCTTTTCTGGGCCACATTCACCAAAAGCCAGGACT...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR TCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGTTACCCCTAACTAGATaGTTCCCTTGTCTTGCCTCA +
Preference number: 2 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRLPLTR*FPCLAS
Trigger: TGAGGCAAGACAAGGGAATCATCTAGTTAGGGGTAA...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR TCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGACAGCTACTTAGAGGCTaGGGCAGGGAGAATTGCTTG +
Preference number: 2 (lower is better)
Translates to: GPAAVIICWSVTGTERAGQLLRG*GRENCL
Trigger: CAAGCAATTCTCCCTGCCTCAGCCTCTAAGTAGCTG...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR GCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTCCCCCATCTGCAGGCTaGTCAGAGTCAGTGGGTATA +
Preference number: 2 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFPPSAG*SESVGI
Trigger: TATACCCACTGACTCTGAGCAGCCTGCAGATGGGGG...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGCCCCACAGAAGTCCTaGCTTTTGGTGAATGTGGCC +
Preference number: 2 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFAPQKS*LLVNVA
Trigger: GGCCACATTCACCAAAAGCCAGGACTTCTGTGGGGC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR TCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCGCAGGGAGAATTGCTTaGACCCAGGAGGAAGAGGTT +
Preference number: 2 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTAGRIA*TQEEEV
Trigger: AACCTCTTCCTCCTGGGTTCAAGCAATTCTCCCTGC...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR TCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGATTCAGAGGAGTACACTaGGGAACAGGTGAGATTGTC +
Preference number: 2 (lower is better)
Translates to: GPAAVIICWSVTGTERAGFRGVH*GTGEIV
Trigger: GACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAA...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR TCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGACAAGAACACCAAGACTaGCATACACGTAAAGTGGCG +
Preference number: 2 (lower is better)
Translates to: GPAAVIICWSVTGTERAGQEHQD*HTRKVA
Trigger: CGCCACTTTACGTGTATGTCAGTCTTGGTGTTCTTG...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR GCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGCGCCAGGCCCCCATCTaGAGGCTGCTCAGAGTCAGT +
Preference number: 2 (lower is better)
Translates to: SPRRPKMANTAYKERECQRQAPI*RLLRVS
Trigger: ACTGACTCTGAGCAGCCTGCAGATGGGGGCCTGGCG...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR GCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCCCTGTGGGTCATAGTTaGCAACCCCTGATCTACACA +
Preference number: 2 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTPVGHS*QPLIYT
Trigger: TGTGTAGATCAGGGGTTGGCAACTATGACCCACAGG...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR GCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCCAGGAGGAAGAGGTTaGAGTGAGCCAAAATCGCAC +
Preference number: 2 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIPGGRG*SEPKSH
Trigger: GTGCGATTTTGGCTCACTGCAACCTCTTCCTCCTGG...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCAGTGCACTCTATCCTaGGTGACAGAGCGAGACTCT +
Preference number: 2 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIQCTLS*VTERDS
Trigger: AGAGTCTCGCTCTGTCACCCAGGATAGAGTGCACTG...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR CAA 90 bp AAGAGAGCACAGACCCCAGAGCTTTACTCCAGGGATCCTTGGCACTaGGGAAAGAAGGAGGCTGAGAGATTTGCTAAGAGAGGGACAGCC +
Preference number: 2 (lower is better)
Translates to: KRAQTPELYSRDPWH*GKKEAERFAKRGTA
Trigger: GGCTGTCCCTCTCTTAGCAAATCTCTCAGCCTCCTTCTTTCCCAAGTGCCAAGGATCCCTGGAGTAAAGCTCTGGGGTCTGTGCTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR TCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGCCTGTAGAATTCAACTaGAATTTCATATATCCCACC +
Preference number: 2 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRPVEFN*NFIYPT
Trigger: GGTGGGATATATGAAATTTCAGTTGAATTCTACAGG...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR TCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAAAATTCAAGTTTGGTTaGCAGCGGGACCCAAAAGAC +
Preference number: 2 (lower is better)
Translates to: GPAAVIICWSVTGTERAGKFKFG*QRDPKD
Trigger: GTCTTTTGGGTCCCGCTGTCAACCAAACTTGAATTT...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR GCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAAGCAAAAGGCCCTGTTaGTTAGGATCTGTACGTGTG +
Preference number: 2 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLSKRPC*LGSVRV
Trigger: CACACGTACAGATCCTAAGCAACAGGGCCTTTTGCT...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR GCA 90 bp TTACAGGAACCCTGCAGGGTAAGAAGCCATCCCCATTTCACAGATGACGAGACTGGCAAGGCCAGAGGCTaGACTCTGAGCTCTTCACAC +
Preference number: 2 (lower is better)
Translates to: LQEPCRVRSHPHFTDDETGKARG*TLSSSH
Trigger: GTGTGAAGAGCTCAGAGTGCAGCCTCTGGCCTTGCC...AGTCTCGTCATCTGTGAAATGGGGATGGCTTCTTACCCTGCAGGGTTCCTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442232.1
3UTR-3UTR CCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGGGTGCTGGTGGCTGTaGGGGGACTGCACTCAGGGA +
Preference number: 2 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAGCWWL*GDCTQG
Trigger: TCCCTGAGTGCAGTCCCCCCACAGCCACCAGCACCC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR TCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCAAGAACACCAAGACTaGCATACACGTAAAGTGGCG +
Preference number: 2 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIQEHQD*HTRKVA
Trigger: CGCCACTTTACGTGTATGTCAGTCTTGGTGTTCTTG...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR TCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGGCATGCCAGTTTCCTaGGCTAAAAGGAAATATATG +
Preference number: 2 (lower is better)
Translates to: GPAAVIICWSVTGTERAGGMPVS*AKRKYM
Trigger: CATATATTTCCTTTTAGCTCAGGAAACTGGCATGCC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR GCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGCAGGTCTGCTCCATGTaGTGCTGGTGGCCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAQVCSM*CWWPRP
Trigger: TGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTG...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTTCCATGTGCTGCTGGTaGCCCAGGCCAGGTGGCCGC +
Preference number: 2 (lower is better)
Translates to: SGGDFTVASRLFYHFITFSMCCW*PRPGGR
Trigger: GCGGCCACCTGGCCTGGGCCACCAGCAGCACATGGA...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR TCA 90 bp TTTATTCCCACATTACAGGAACCCTGCAGGGTAAGAAGCCATCCCCATTTCACAGTGTCCTACAGCTTGTaGGTGGCAAGGCCAGAGGCT +
Preference number: 2 (lower is better)
Translates to: FIPTLQEPCRVRSHPHFTVSYSL*VARPEA
Trigger: AGCCTCTGGCCTTGCCACTCACAAGCTGTAGGACAC...TGTGAAATGGGGATGGCTTCTTACCCTGCAGGGTTCCTGTAATGTGGGAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442232.1
3UTR-3UTR GCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAGACCCAAAAGACATTTaGAGAGCAGAGTTCAGAATG +
Preference number: 2 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLDPKDI*RAEFRM
Trigger: CATTCTGAACTCTGCTCTGCAAATGTCTTTTGGGTC...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR GCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTATGATTCCCTTGTCTTaGCTCAAGCTGGCAACAATT +
Preference number: 2 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFMIPLS*LKLATI
Trigger: AATTGTTGCCAGCTTGAGGCAAGACAAGGGAATCAT...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCGGGTGCTGGTGGCTGTaGGGGGACTGCACTCAGGGA +
Preference number: 2 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAGCWWL*GDCTQG
Trigger: TCCCTGAGTGCAGTCCCCCCACAGCCACCAGCACCC...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCAGCCACCAGTGTGTGTaGCAGCCTTTGGACGTGGTG +
Preference number: 2 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPSHQCV*QPLDVV
Trigger: CACCACGTCCAAAGGCTGCCACACACACTGGTGGCT...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTATGTCTTGCCTCAAGCTaGCAACAATTTAAGTTACCG +
Preference number: 2 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLCLASS*QQFKLP
Trigger: CGGTAACTTAAATTGTTGCCAGCTTGAGGCAAGACA...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR TCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCAGCGCTGTTTCAATGTaGATTATTGCATTGTTGCTG +
Preference number: 2 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTSAVSM*IIALLL
Trigger: CAGCAACAATGCAATAATTCACATTGAAACAGCGCT...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR TCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAATAGTTGCCAACCCCTaGTCTACACAAAGAAATCTT +
Preference number: 2 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLIVANP*STQRNL
Trigger: AAGATTTCTTTGTGTAGATCAGGGGTTGGCAACTAT...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR TCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGCTTAGCTCATGGCTGTaGAAAACCAGACCGCTGACC +
Preference number: 2 (lower is better)
Translates to: SPRRPKMANTAYKERECQLSSWL*KTRPLT
Trigger: GGTCAGCGGTCTGGTTTTTCACAGCCATGAGCTAAG...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR GCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGACCCAAAAGACATTTaGAGAGCAGAGTTCAGAATG +
Preference number: 2 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIDPKDI*RAEFRM
Trigger: CATTCTGAACTCTGCTCTGCAAATGTCTTTTGGGTC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTAAGAAAATTCAAGTTTaGTTGACAGCGGGACCCAAA +
Preference number: 2 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFKKIQV*LTAGPK
Trigger: TTTGGGTCCCGCTGTCAACCAAACTTGAATTTTCTT...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGAAGGGAACAGGAGCCTaGAAGGCGGGATTCTGGTTA +
Preference number: 2 (lower is better)
Translates to: SPRRPKMANTAYKERECQKGTGA*KAGFWL
Trigger: TAACCAGAATCCCGCCTTCCAGGCTCCTGTTCCCTT...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR TCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTAAAAAGGCCAGGTATTaGATATTTTATGTGGTGTGG +
Preference number: 2 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFKKARY*IFYVVW
Trigger: CCACACCACATAAAATATTCAATACCTGGCCTTTTT...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR GCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTGCTCACAGAGGCAGGTaGTGGGATTGTGGGGACCTG +
Preference number: 2 (lower is better)
Translates to: SGGDFTVASRLFYHFITFAHRGR*WDCGDL
Trigger: CAGGTCCCCACAATCCCAGCACCTGCCTCTGTGAGC...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR GCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAACTTTCATTTTGTGTTaGACATCAGTGTGGATCAAA +
Preference number: 2 (lower is better)
Translates to: GPAAVIICWSVTGTERAGTFILC*TSVWIK
Trigger: TTTGATCCACACTGATGTGCAACACAAAATGAAAGT...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGTCCATGTGCTGCTGGTaGCCCAGGCCAGGTGGCCGC +
Preference number: 2 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMSMCCW*PRPGGR
Trigger: GCGGCCACCTGGCCTGGGCCACCAGCAGCACATGGA...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCGAAGCGGCAGGGTGGTaGGGGTGTTTGCTAGAGAGG +
Preference number: 2 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAEAAGW*GCLLER
Trigger: CCTCTCTAGCAAACACCCCCACCACCCTGCCGCTTC...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR TCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGAGTCCTGGCTTTTGGTaGATGTGGCCCAGAAAAGCC +
Preference number: 2 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYASPGFW*MWPRKA
Trigger: GGCTTTTCTGGGCCACATTCACCAAAAGCCAGGACT...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR TCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCATTGGCTCTTCAGTATaGAACCTAAAACAACGATGT +
Preference number: 2 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIIGSSV*NLKQRC
Trigger: ACATCGTTGTTTTAGGTTTCATACTGAAGAGCCAAT...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR TCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCTTTTCCAGTGTAGCCTaGAACATTCACTGTGATTTT +
Preference number: 2 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIFSSVA*NIHCDF
Trigger: AAAATCACAGTGAATGTTTCAGGCTACACTGGAAAA...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGAAGGGAACAGGAGCCTaGAAGGCGGGATTCTGGTTA +
Preference number: 2 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAKGTGA*KAGFWL
Trigger: TAACCAGAATCCCGCCTTCCAGGCTCCTGTTCCCTT...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCATTGAATATTTTATGTaGTGTGGGCCAAAGGCAAAA +
Preference number: 2 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTIEYFM*CGPKAK
Trigger: TTTTGCCTTTGGCCCACACCACATAAAATATTCAAT...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR TCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGTTACCCCTAACTAGATaGTTCCCTTGTCTTGCCTCA +
Preference number: 2 (lower is better)
Translates to: SPRRPKMANTAYKERECQLPLTR*FPCLAS
Trigger: TGAGGCAAGACAAGGGAATCATCTAGTTAGGGGTAA...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGGTGTGGCTTCAGCAGTaGGGGAGGGGCCAGTCCTTC +
Preference number: 2 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMVWLQQ*GRGQSF
Trigger: GAAGGACTGGCCCCTCCCCCACTGCTGAAGCCACAC...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR GCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCTATGCAGGAGGCATTTaGTTCCATCCACGTGGCCCT +
Preference number: 2 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAYAGGI*FHPRGP
Trigger: AGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATA...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGTGGAAGGCGGGATTCTaGTTAAATCTAGTTAGCCAT +
Preference number: 2 (lower is better)
Translates to: SPRRPKMANTAYKERECQWKAGF*LNLVSH
Trigger: ATGGCTAACTAGATTTAACCAGAATCCCGCCTTCCA...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCGGGATCCTTGGCACTTaGGAAAGAAGGAGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAGILGT*ERRRLR
Trigger: TCTCAGCCTCCTTCTTTCCCAAGTGCCAAGGATCCC...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR CAA 90 bp TATCCTTTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATaGTCAGTGTATGCGCAGAAGCTGAGATCCCACCCATGGTTAAAA +
Preference number: 2 (lower is better)
Translates to: YPFFFSEEYTEEQVR*SVYAQKLRSHPWLK
Trigger: TTTTAACCATGGGTGGGATCTCAGCTTCTGCGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAAAGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR TCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTACACTGAGGAACAGGTaGGATTGTCAGTGTATGCGC +
Preference number: 2 (lower is better)
Translates to: SGGDFTVASRLFYHFITFTLRNR*DCQCMR
Trigger: GCGCATACACTGACAATCTCACCTGTTCCTCAGTGT...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGTTGCTTCCATCCACGTaGCCCTCACATACCCTGGGC +
Preference number: 2 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMLLPST*PSHTLG
Trigger: GCCCAGGGTATGTGAGGGCCACGTGGATGGAAGCAA...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR TCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGATTGGCTCTTCAGTATaGAACCTAAAACAACGATGT +
Preference number: 2 (lower is better)
Translates to: SPRRPKMANTAYKERECQIGSSV*NLKQRC
Trigger: ACATCGTTGTTTTAGGTTTCATACTGAAGAGCCAAT...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR GCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTAGCAAAAGGCCCTGTTaGTTAGGATCTGTACGTGTG +
Preference number: 2 (lower is better)
Translates to: SGGDFTVASRLFYHFITFSKRPC*LGSVRV
Trigger: CACACGTACAGATCCTAAGCAACAGGGCCTTTTGCT...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGTGGAAGGCGGGATTCTaGTTAAATCTAGTTAGCCAT +
Preference number: 2 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAWKAGF*LNLVSH
Trigger: ATGGCTAACTAGATTTAACCAGAATCCCGCCTTCCA...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR TCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCAGTCTATCCACTACCTaGCTTGCTTTTCCTAGACTG +
Preference number: 2 (lower is better)
Translates to: NCFVNITSMDSSQVGQRASLSTT*LAFPRL
Trigger: CAGTCTAGGAAAAGCAAGTCAGGTAGTGGATAGACT...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGAGGATGAGGACAGCGTaGGTGACACCTTTGTCTCCT +
Preference number: 2 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMRMRTA*VTPLSP
Trigger: AGGAGACAAAGGTGTCACCCACGCTGTCCTCATCCT...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR GCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTATGATTCCCTTGTCTTaGCTCAAGCTGGCAACAATT +
Preference number: 2 (lower is better)
Translates to: SGGDFTVASRLFYHFITFMIPLS*LKLATI
Trigger: AATTGTTGCCAGCTTGAGGCAAGACAAGGGAATCAT...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR TCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTAGCGCTGTTTCAATGTaGATTATTGCATTGTTGCTG +
Preference number: 2 (lower is better)
Translates to: SGGDFTVASRLFYHFITFSAVSM*IIALLL
Trigger: CAGCAACAATGCAATAATTCACATTGAAACAGCGCT...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCAGACATGCTTATTGTTaGCTTTTGTCAACATGGCTG +
Preference number: 2 (lower is better)
Translates to: NCFVNITSMDSSQVGQRARHAYC*LLSTWL
Trigger: CAGCCATGTTGACAAAAGCCAACAATAAGCATGTCT...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR TCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGAGTCTATCCACTACCTaGCTTGCTTTTCCTAGACTG +
Preference number: 2 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMSLSTT*LAFPRL
Trigger: CAGTCTAGGAAAAGCAAGTCAGGTAGTGGATAGACT...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGAACCACATAAACCATTaGCTCTTCAGTATGAAACCT +
Preference number: 2 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMNHINH*LFSMKP
Trigger: AGGTTTCATACTGAAGAGCCAATGGTTTATGTGGTT...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR CCA 72 bp GGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTaGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGG +
Preference number: 3 (lower is better)
Translates to: GLLHVLLVAQAR*PPTFMRNPVVR
Trigger: CCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR GCA 72 bp GTGTGGCAGCCTTTGGACGTGGTGGTGCCCCTCGCCTaGAGAGCACAGCATCATGAGGGTGCTGGTGGCTGT +
Preference number: 3 (lower is better)
Translates to: VWQPLDVVVPLA*RAQHHEGAGGC
Trigger: ACAGCCACCAGCACCCTCATGATGCTGTGCTCTGCAGGCGAGGGGCACCACCACGTCCAAAGGCTGCCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR GCA 72 bp GGGAGGTGGCAGAATCGGCACGGGCCAGGGACCGGCTaGAGTGATCATATGCTGGAGCGTCACTGGGACAGA +
Preference number: 3 (lower is better)
Translates to: GRWQNRHGPGTG*SDHMLERHWDR
Trigger: TCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCCCTGGCCCGTGCCGATTCTGCCACCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR TCA 72 bp GTGGCAGAATCGGCACGGGCCAGGGACCGGCTGCAGTaGTCATATGCTGGAGCGTCACTGGGACAGAGAGAG +
Preference number: 3 (lower is better)
Translates to: VAESARARDRLQ*SYAGASLGQRE
Trigger: CTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCCCTGGCCCGTGCCGATTCTGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR CCA 72 bp CAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTaGCCCTCACATACCCTGGGCTCCCCGGACGCCAGT +
Preference number: 3 (lower is better)
Translates to: QGLCRRHLLPST*PSHTLGSPDAS
Trigger: ACTGGCGTCCGGGGAGCCCAGGGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR CCA 72 bp CTTCTTGTGGGTCTGCAAATGTGTGTGGCTGGGAGGTaGCAGAATCGGCACGGGCCAGGGACCGGCTGCAGT +
Preference number: 3 (lower is better)
Translates to: LLVGLQMCVAGR*QNRHGPGTGCS
Trigger: ACTGCAGCCGGTCCCTGGCCCGTGCCGATTCTGCCACCTCCCAGCCACACACATTTGCAGACCCACAAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR CCA 72 bp TTGGTGAATGTGGCCCAGAAAAGCCACCAGTGTGTGTaGCAGCCTTTGGACGTGGTGGTGCCCCTCGCCTGC +
Preference number: 3 (lower is better)
Translates to: LVNVAQKSHQCV*QPLDVVVPLAC
Trigger: GCAGGCGAGGGGCACCACCACGTCCAAAGGCTGCCACACACACTGGTGGCTTTTCTGGGCCACATTCACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR CCA 72 bp GGCATTTGCTTCCATCCACGTGGCCCTCACATACCCTaGGCTCCCCGGACGCCAGTCAGTCTATCCACTACC +
Preference number: 3 (lower is better)
Translates to: GICFHPRGPHIP*APRTPVSLSTT
Trigger: GGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATGTGAGGGCCACGTGGATGGAAGCAAATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CAA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGTCTCTCTCTTCCCGGTaGGCCATAATCCAGGCATAC +
Preference number: 3 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRSLSSR*AIIQAY
Trigger: GTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGA...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CAA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGCGTGGGTGACACCTTaGTCTCCTGCTAAAACCCAG +
Preference number: 3 (lower is better)
Translates to: GPAAVIICWSVTGTERAGAWVTP*SPAKTQ
Trigger: CTGGGTTTTAGCAGGAGACAAAGGTGTCACCCACGC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR GCA 72 bp GTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTaGTTCCATCCACGTGGCCCTCACATACCCTGGGCT +
Preference number: 3 (lower is better)
Translates to: VGQRAKGYAGGI*FHPRGPHIPWA
Trigger: AGCCCAGGGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR GCA 72 bp GGACTCCTCCCAAGTGGGACAAAGAGCCAAGGGCTATaGAGGAGGCATTTGCTTCCATCCACGTGGCCCTCA +
Preference number: 3 (lower is better)
Translates to: GLLPSGTKSQGL*RRHLLPSTWPS
Trigger: TGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGGAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR TCA 72 bp GGGCAGGGCCACAGGTGTCCTGACAGGGAACATCTTTaGAGGATCTGGCACAAACAAGGGCCCAGTTCACAA +
Preference number: 3 (lower is better)
Translates to: GQGHRCPDREHL*RIWHKQGPSSQ
Trigger: TTGTGAACTGGGCCCTTGTTTGTGCCAGATCCTTCAAAGATGTTCCCTGTCAGGACACCTGTGGCCCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CAA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTACAGAAGTCCTGGCTTTaGGTGAATGTGGCCCAGAAA +
Preference number: 3 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLQKSWL*VNVAQK
Trigger: TTTCTGGGCCACATTCACCAAAAGCCAGGACTTCTG...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CAA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCTCTCTCTCTTCCCGGTaGGCCATAATCCAGGCATAC +
Preference number: 3 (lower is better)
Translates to: PPKWDKEPRAMQEAFASISLSSR*AIIQAY
Trigger: GTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGA...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CAA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAGAGGAACAGGTGAGATaGTCAGTGTATGCGCAGAAG +
Preference number: 3 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLEEQVR*SVYAQK
Trigger: CTTCTGCGCATACACTGACAATCTCACCTGTTCCTC...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR GCA 72 bp CATAATCCAGGCATACGTCCCAGCAAAAGGCCCTGTTaGTTAGGATCTGTACGTGTGGCTTCAGCAGTGGGG +
Preference number: 3 (lower is better)
Translates to: HNPGIRPSKRPC*LGSVRVASAVG
Trigger: CCCCACTGCTGAAGCCACACGTACAGATCCTAAGCAACAGGGCCTTTTGCTGGGACGTATGCCTGGATTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CAA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCAGCAAAAGGCCCTGTaGCTTAGGATCTGTACGTGT +
Preference number: 3 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIQQKAL*LRICTC
Trigger: ACACGTACAGATCCTAAGCAACAGGGCCTTTTGCTG...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CAA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGAGGAACAGGTGAGATaGTCAGTGTATGCGCAGAAG +
Preference number: 3 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIEEQVR*SVYAQK
Trigger: CTTCTGCGCATACACTGACAATCTCACCTGTTCCTC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CAA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGATATCCACTACCTGACTaGCTTTTCCTAGACTGGAGA +
Preference number: 3 (lower is better)
Translates to: GPAAVIICWSVTGTERAGYPLPD*LFLDWR
Trigger: TCTCCAGTCTAGGAAAAGCAAGTCAGGTAGTGGATA...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CAA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAGGACCCAAAAGACATTaGCAGAGCAGAGTTCAGAAT +
Preference number: 3 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLGPKRH*QSRVQN
Trigger: ATTCTGAACTCTGCTCTGCAAATGTCTTTTGGGTCC...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CAA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAAAAATTCAAGTTTGGTaGACAGCGGGACCCAAAAGA +
Preference number: 3 (lower is better)
Translates to: GPAAVIICWSVTGTERAGKIQVW*TAGPKR
Trigger: TCTTTTGGGTCCCGCTGTCAACCAAACTTGAATTTT...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CAA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGATGATTCCCTTGTCTaGCCTCAAGCTGGCAACAAT +
Preference number: 3 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIDDSLV*PQAGNN
Trigger: ATTGTTGCCAGCTTGAGGCAAGACAAGGGAATCATC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CAA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAAAGACATGCTTATTGTaGGCTTTTGTCAACATGGCT +
Preference number: 3 (lower is better)
Translates to: GPAAVIICWSVTGTERAGKTCLL*AFVNMA
Trigger: AGCCATGTTGACAAAAGCCAACAATAAGCATGTCTT...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CAA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGACACAGTGCTATAAATTaGGTCTTCACTTGCTACACT +
Preference number: 3 (lower is better)
Translates to: GPAAVIICWSVTGTERAGHSAIN*VFTCYT
Trigger: AGTGTAGCAAGTGAAGACCAAATTTATAGCACTGTG...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CAA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAAAACCACATAAACCATaGGCTCTTCAGTATGAAACC +
Preference number: 3 (lower is better)
Translates to: GPAAVIICWSVTGTERAGKPHKP*ALQYET
Trigger: GGTTTCATACTGAAGAGCCAATGGTTTATGTGGTTT...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CAA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAAAGACATGCTTATTGTaGGCTTTTGTCAACATGGCT +
Preference number: 3 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLKTCLL*AFVNMA
Trigger: AGCCATGTTGACAAAAGCCAACAATAAGCATGTCTT...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CAA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCCACAGTGCTATAAATTaGGTCTTCACTTGCTACACT +
Preference number: 3 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTHSAIN*VFTCYT
Trigger: AGTGTAGCAAGTGAAGACCAAATTTATAGCACTGTG...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR GCA 72 bp CTGAAATTATCAAGGCTACAGTTCTTCTTGTGGGTCTaGAAATGTGTGTGGCTGGGAGGTGGCAGAATCGGC +
Preference number: 3 (lower is better)
Translates to: LKLSRLQFFLWV*KCVWLGGGRIG
Trigger: GCCGATTCTGCCACCTCCCAGCCACACACATTTGCAGACCCACAAGAAGAACTGTAGCCTTGATAATTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CAA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGTTAAGAACCTGATTTaGCTATCTAATGCACAGTGC +
Preference number: 3 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIVKNLI*LSNAQC
Trigger: GCACTGTGCATTAGATAGCAAAATCAGGTTCTTAAC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CAA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCAAACCACATAAACCATaGGCTCTTCAGTATGAAACC +
Preference number: 3 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIKPHKP*ALQYET
Trigger: GGTTTCATACTGAAGAGCCAATGGTTTATGTGGTTT...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR TCA 72 bp GGGAGTTGTACGGCTTATAGTCATTGTATTTACATCTaGTGGAGTAGCAGAGGGTGGGGCATGCCAGTTTCC +
Preference number: 3 (lower is better)
Translates to: GSCTAYSHCIYI*WSSRGWGMPVS
Trigger: GGAAACTGGCATGCCCCACCCTCTGCTACTCCATCAGATGTAAATACAATGACTATAAGCCGTACAACTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR CCA 72 bp CCTGAACTGAAATTATCAAGGCTACAGTTCTTCTTGTaGGTCTGCAAATGTGTGTGGCTGGGAGGTGGCAGA +
Preference number: 3 (lower is better)
Translates to: PELKLSRLQFFL*VCKCVWLGGGR
Trigger: TCTGCCACCTCCCAGCCACACACATTTGCAGACCCACAAGAAGAACTGTAGCCTTGATAATTTCAGTTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CAA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGTATCCACTACCTGACTaGCTTTTCCTAGACTGGAGA +
Preference number: 3 (lower is better)
Translates to: SPRRPKMANTAYKERECQYPLPD*LFLDWR
Trigger: TCTCCAGTCTAGGAAAAGCAAGTCAGGTAGTGGATA...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR GCA 72 bp TACATTGGCTCCTTTATTCCCACATTACAGGAACCCTaGAGGGTAAGAAGCCATCCCCATTTCACAGATGAC +
Preference number: 3 (lower is better)
Translates to: YIGSFIPTLQEP*RVRSHPHFTDD
Trigger: GTCATCTGTGAAATGGGGATGGCTTCTTACCCTGCAGGGTTCCTGTAATGTGGGAATAAAGGAGCCAATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442232.1
3UTR-3UTR CAA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGGACCCAAAAGACATTaGCAGAGCAGAGTTCAGAAT +
Preference number: 3 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAGPKRH*QSRVQN
Trigger: ATTCTGAACTCTGCTCTGCAAATGTCTTTTGGGTCC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CAA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCCAGCAAAAGGCCCTGTaGCTTAGGATCTGTACGTGT +
Preference number: 3 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAQQKAL*LRICTC
Trigger: ACACGTACAGATCCTAAGCAACAGGGCCTTTTGCTG...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CAA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGGTTAAGAACCTGATTTaGCTATCTAATGCACAGTGC +
Preference number: 3 (lower is better)
Translates to: SPRRPKMANTAYKERECQVKNLI*LSNAQC
Trigger: GCACTGTGCATTAGATAGCAAAATCAGGTTCTTAAC...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CAA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGCAGAAGTCCTGGCTTTaGGTGAATGTGGCCCAGAAA +
Preference number: 3 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMQKSWL*VNVAQK
Trigger: TTTCTGGGCCACATTCACCAAAAGCCAGGACTTCTG...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CAA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCGCTTATTGTTGGCTTTaGTCAACATGGCTGTTGGTT +
Preference number: 3 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAAYCWL*STWLLV
Trigger: AACCAACAGCCATGTTGACAAAAGCCAACAATAAGC...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CAA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTTTGTCAACATGGCTGTaGGTTAAATTAAAAACCCCT +
Preference number: 3 (lower is better)
Translates to: SGGDFTVASRLFYHFITFLSTWL*VKLKTP
Trigger: AGGGGTTTTTAATTTAACCAACAGCCATGTTGACAA...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR GCA 72 bp AGTTCAGAATGGAAGCGCTGTTTCAATGTGAATTATTaGATTGTTGCTGAGATATTACACTATCATGAGACC +
Preference number: 3 (lower is better)
Translates to: SSEWKRCFNVNY*IVAEILHYHET
Trigger: GGTCTCATGATAGTGTAATATCTCAGCAACAATGCAATAATTCACATTGAAACAGCGCTTCCATTCTGAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR CCA 72 bp GTTGGGATCAGGGCTAGAATAAGACATGCTTATTGTTaGCTTTTGTCAACATGGCTGTTGGTTAAATTAAAA +
Preference number: 3 (lower is better)
Translates to: VGIRARIRHAYC*LLSTWLLVKLK
Trigger: TTTTAATTTAACCAACAGCCATGTTGACAAAAGCCAACAATAAGCATGTCTTATTCTAGCCCTGATCCCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR-3UTR CAA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGTTGTCAACATGGCTGTaGGTTAAATTAAAAACCCCT +
Preference number: 3 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMLSTWL*VKLKTP
Trigger: AGGGGTTTTTAATTTAACCAACAGCCATGTTGACAA...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR TCA 72 bp TTTGTACAAAATCCTGGTGAAGAATCATATCAAAGATaGGAAGCAGGGAGTTCAAAGGTAAACAAACATTTG +
Preference number: 3 (lower is better)
Translates to: FVQNPGEESYQR*EAGSSKVNKHL
Trigger: CAAATGTTTGTTTACCTTTGAACTCCCTGCTTCTCATCTTTGATATGATTCTTCACCAGGATTTTGTACAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR TCA 72 bp AGTTGCCAACCCCTGATCTACACAAAGAAATCTTGGTaGATTATACAATTTCCTTTAATTCTAAGTGCATAC +
Preference number: 3 (lower is better)
Translates to: SCQPLIYTKKSW*IIQFPLILSAY
Trigger: GTATGCACTTAGAATTAAAGGAAATTGTATAATTCACCAAGATTTCTTTGTGTAGATCAGGGGTTGGCAACT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGAGAACCAGGATGAGCTaGCGGTGCCGGCCCACGGGG +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVRTRMS*RCRPTG
Trigger: CCCCGTGGGCCGGCACCGGCAGCTCATCCTGGTTCT...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGCGTCCATGCTGGGCGTaGGGACCAAGGCCGACAGCT +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVRPCWA*GPRPTA
Trigger: AGCTGTCGGCCTTGGTCCTCACGCCCAGCATGGACG...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGGACACGAGGACACACTaGGCGCCGGCAGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVDTRTH*APAARK
Trigger: CTTCCTGGCTGCCGGCGCTCAGTGTGTCCTCGTGTC...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGGGGGCCTCCACCCTCTaGTCCACCCTCGGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVGASTL*STLGFG
Trigger: TCCAAACCCGAGGGTGGATCAGAGGGTGGAGGCCCC...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGCAGCTGGGAAGTCTGTaGGTCGCAGCCGGGCGATGG +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVQLGSL*VAAGRW
Trigger: CCATCGCCCGGCTGCGACTCACAGACTTCCCAGCTG...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGCCTTGGTGGCCACACTaGCCACTAGGGGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVPWWPH*PLGAGS
Trigger: GCTGCCAGCCCCTAGTGGGCAGTGTGGCCACCAAGG...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGCTGCCAGCAGGAGACTaGTGGCCGGAGCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVLPAGD*WPELGD
Trigger: GTCCCCAAGCTCCGGCCACCAGTCTCCTGCTGGCAG...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGGGCAGCCTTTGGACGTaGTGGTGCCCCTCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVGSLWT*WCPSPA
Trigger: TGCAGGCGAGGGGCACCACCACGTCCAAAGGCTGCC...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGGCCAGGGCATCGGCATaGCGTCCAAGGTACTGGAGG +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVARASA*RPRYWR
Trigger: CCTCCAGTACCTTGGACGTCATGCCGATGCCCTGGC...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGGCTTGGGGTTGCCGATaGCAGCCGCCATGGATGTGG +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVAWGCR*QPPWMW
Trigger: CCACATCCATGGCGGCTGTCATCGGCAACCCCAAGC...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGAGCTTCACAGGCAGCTaGAGGTCCAGGACGTCGGCG +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVSFTGS*RSRTSA
Trigger: CGCCGACGTCCTGGACCTGCAGCTGCCTGTGAAGCT...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGGGAGTAGGAGAGAGCTaGGGAGGGTGCACTGCCAGC +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVGVGES*GGCTAS
Trigger: GCTGGCAGTGCACCCTCCCCAGCTCTCTCCTACTCC...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGTGCGCCAGTGTCCGTTaGGAGGGGCTTTCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVCASVR*EGLSVE
Trigger: CTCCACCGAAAGCCCCTCCCAACGGACACTGGCGCA...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGGTGTGTGGCAGCCTTTaGACGTGGTGGTGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVVCGSL*TWWCPS
Trigger: CGAGGGGCACCACCACGTCCAAAGGCTGCCACACAC...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGAGTGTGCTGCTGCACTaGTGGAGCCGGTCGCCCGGG +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRSVLLH*WSRSPG
Trigger: CCCGGGCGACCGGCTCCAGCAGTGCAGCAGCACACT...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGGTGGTGCCCCTCGCCTaGAGAGCACAGCATCATGAG +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVVVPLA*RAQHHE
Trigger: CTCATGATGCTGTGCTCTGCAGGCGAGGGGCACCAC...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGGGGCCAGGGACCGGCTaGAGTGATCATATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVGPGTG*SDHMLE
Trigger: CTCCAGCATATGATCACTGCAGCCGGTCCCTGGCCC...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGCAAGGTTCCCATGTGTaGAGGCCTGTGAGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVQGSHV*RPVRRG
Trigger: ACCGCGCCTCACAGGCCTCCACACATGGGAACCTTG...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGGCCCGGGCCTCGCTCTaGATGTCTCGTAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRARASL*MSRSSR
Trigger: CCGGGAGCTACGAGACATCCAGAGCGAGGCCCGGGC...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGCCTCGGCCGATGGCATaGGCCCCCACAGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRPRPMA*APTATC
Trigger: ACAGGTGGCTGTGGGGGCCCATGCCATCGGCCGAGG...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGGAAGCGGCAGGGTGGTaGGGGTGTTTGCTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVEAAGW*GCLLER
Trigger: CCTCTCTAGCAAACACCCCCACCACCCTGCCGCTTC...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGCAGGAAGCGGCAGGGTaGTGGGGGTGTTTGCTAGAG +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVQEAAG*WGCLLE
Trigger: CTCTAGCAAACACCCCCACCACCCTGCCGCTTCCTG...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGGGCCCTCACATACCCTaGGCTCCCCGGACGCCAGTC +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRGPHIP*APRTPV
Trigger: GACTGGCGTCCGGGGAGCCCAGGGTATGTGAGGGCC...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGGGGGCCTCCACCCTCTaGTCCACCCTCGGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRGASTL*STLGFG
Trigger: TCCAAACCCGAGGGTGGATCAGAGGGTGGAGGCCCC...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGTCACCGAGACTCTCATaGCTCCGGCTGTCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVSPRLS*LRLSQV
Trigger: AACCTGGGACAGCCGGAGGCATGAGAGTCTCGGTGA...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGCAGGGTTATTACTCTTaGTCACCTGGCCGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVQGYYS*SPGRRS
Trigger: GGAGCGGCGGCCAGGTGAGCAAGAGTAATAACCCTG...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGGAGGAGGTCCCGTCCTaGGTCGGTGACACAGTGTTA +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVEEVPS*VGDTVL
Trigger: TAACACTGTGTCACCGACCCAGGACGGGACCTCCTC...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGCTGCCAGCAGGAGACTaGTGGCCGGAGCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRLPAGD*WPELGD
Trigger: GTCCCCAAGCTCCGGCCACCAGTCTCCTGCTGGCAG...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGGTGAGCCCAGCGAGGTaGTCTCGGTGCGCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRVSPAR*SRCASV
Trigger: GACACTGGCGCACCGAGACCACCTCGCTGGGCTCAC...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGTTGCTTCCATCCACGTaGCCCTCACATACCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVLLPST*PSHTLG
Trigger: GCCCAGGGTATGTGAGGGCCACGTGGATGGAAGCAA...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGCTGTCCTTTACCTGGTaGGCTAAGCCCAGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVLSFTW*AKPSCC
Trigger: GCAGCAACTGGGCTTAGCTCACCAGGTAAAGGACAG...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGGGGTCAGGGCACTCATaGCCCTCTCCTTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRGSGHS*PSPWWP
Trigger: TGGCCACCAAGGAGAGGGTCATGAGTGCCCTGACCC...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGGACGCTCCACCGCAATaGGATGACTCTGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVDAPPQ*DDSVSP
Trigger: AGGAGACACAGAGTCATCTCATTGCGGTGGAGCGTC...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGAGAGAACAGGCCTGCTaGACGCACTGGTTTCTGACG +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVREQAC*THWFLT
Trigger: CGTCAGAAACCAGTGCGTTCAGCAGGCCTGTTCTCT...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGCGGACACTGGCAATGTaGTGCTCCAGGGCTGAGCCG +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRRTLAM*CSRAEP
Trigger: CGGCTCAGCCCTGGAGCAGCACATTGCCAGTGTCCG...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGCACTCTCTGTCTCACTaGTGGCACAGGCCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVHSLSH*WHRPLS
Trigger: ACTCAAGGGCCTGTGCCAGCAGTGAGACAGAGAGTG...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGGGCCGAAGGAGCTCTTaGTGCTGGCAGGGTTGCCGT +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRGRRSS*CWQGCR
Trigger: ACGGCAACCCTGCCAGCAGCAAGAGCTCCTTCGGCC...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGTGCTGCTGCACTGCTaGAGCCGGTCGCCCGGGTCG +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGVLLHC*SRSPGS
Trigger: CGACCCGGGCGACCGGCTCCAGCAGTGCAGCAGCAC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGAGCCTTTGGACGTGGTaGTGCCCCTCGCCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRSLWTW*CPSPAE
Trigger: CTCTGCAGGCGAGGGGCACCACCACGTCCAAAGGCT...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGAGACTCTTGGGGTCTTaGGCCAGTCCAGATGCAAAG +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVRLLGS*ASPDAK
Trigger: CTTTGCATCTGGACTGGCTCAAGACCCCAAGAGTCT...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGTGGCTCAACTTGTCGTaGAGGTCTTTAGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVWLNLS*RSLASA
Trigger: GGCACTGGCTAAAGACCTTCACGACAAGTTGAGCCA...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGGCCGTTCAGCAGGGATaGGTAGAAGGCATGGATGAA +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVAVQQG*VEGMDE
Trigger: TTCATCCATGCCTTCTACTCATCCCTGCTGAACGGC...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGGGAGACAAAGCTCATTaGGGAGGCAATGGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVGDKAH*GGNGAQ
Trigger: CTGAGCTCCATTGCCTCCTCAATGAGCTTTGTCTCC...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGCTTAGCTCATGGCTGTaGAAAACCAGACCGCTGACC +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVLSSWL*KTRPLT
Trigger: GGTCAGCGGTCTGGTTTTTCACAGCCATGAGCTAAG...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGCAGCTACTTAGAGGCTaGGGCAGGGAGAATTGCTTG +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVQLLRG*GRENCL
Trigger: CAAGCAATTCTCCCTGCCTCAGCCTCTAAGTAGCTG...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGGGTAGTGATAGGCACTaGCCAGGTTGCTATAAGCCC +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVGSDRH*PGCYKP
Trigger: GGGCTTATAGCAACCTGGGCAGTGCCTATCACTACC...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGTCTCCAAATCCTGCATaGACCTGGCAGCATGGCCTA +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVSPNPA*TWQHGL
Trigger: TAGGCCATGCTGCCAGGTGCATGCAGGATTTGGAGA...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGTCAAGCTGGTGGTACTaGAGGGCTGTGTCATACTCC +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVSSWWY*RAVSYS
Trigger: GGAGTATGACACAGCCCTGCAGTACCACCAGCTTGA...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGCAGCCCTCTCGAAGGTaGCCAGGGATTCATAAGTCA +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVQPSRR*PGIHKS
Trigger: TGACTTATGAATCCCTGGGCACCTTCGAGAGGGCTG...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGCGAAGGAGCTCTTGCTaGTGGCAGGGTTGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRRRSSC*WQGCRP
Trigger: TGGACGGCAACCCTGCCAGCAGCAAGAGCTCCTTCG...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGGATTTCTCCACCAGGTaGAGCAGCACTCGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRDFSTR*SSTRRA
Trigger: CGCCCTGCGAGTGCTGCTGCACCTGGTGGAGAAATC...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGCCCGGCTGATGAGCTaGTCGCCCGTCTCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGARLMS*SPVSEA
Trigger: TGCCTCCGAGACGGGCGAGCAGCTCATCAGCCGGGC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGTATGCAGGAGGCATTTaGTTCCATCCACGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVYAGGI*FHPRGP
Trigger: AGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATA...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGCGGCATTCTCCTGTCTaGTCACCTAAGGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVRHSPV*SPKVLA
Trigger: AGCCAAGACCTTAGGTGACCAGACAGGAGAATGCCG...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGAGGCTCGTCATGCTCTaGCAGCTCCTGTTAAACAGG +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVRLVML*QLLLNR
Trigger: CCTGTTTAACAGGAGCTGCCAGAGCATGACGAGCCT...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGATCTGCACCACCTTCATaGCCTCCCCCAGGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGSAPPS*PPPGRR
Trigger: GCGCCGCCCTGGGGGAGGCCATGAAGGTGGTGCAGA...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGGCTGGGATGTGTACATaGCATTGCGCTGCCCATTCT +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVAGMCT*HCAAHS
Trigger: AGAATGGGCAGCGCAATGCCATGTACACATCCCAGC...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAGTCGCAGCCGGGCGATaGCCGGCCACTGTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLVAAGR*PATVLA
Trigger: AGCCAGCACAGTGGCCGGCCATCGCCCGGCTGCGAC...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGAGGATGAGGACAGCGTaGGTGACACCTTTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVRMRTA*VTPLSP
Trigger: AGGAGACAAAGGTGTCACCCACGCTGTCCTCATCCT...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGTATAAGATGCAGTTCTaGGGGTCAACAGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVYKMQF*GSTARA
Trigger: AGCCCTGGCTGTTGACCCTCAGAACTGCATCTTATA...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397906.6
CDS-3UTR TCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGACACGAGGACACACTaGGCGCCGGCAGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGDTRTH*APAARK
Trigger: CTTCCTGGCTGCCGGCGCTCAGTGTGTCCTCGTGTC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGTTTGATGGACATCTCTaGGGTGGTGGGGCTGCTATA +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVFDGHL*GGGAAI
Trigger: TATAGCAGCCCCACCACCTCAGAGATGTCCATCAAA...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGGCTGTCAGGAGTTCCTaGCCAACCACAGACACGACC +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRAVRSS*PTTDTT
Trigger: GGTCGTGTCTGTGGTTGGGCAGGAACTCCTGACAGC...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGCTCCATCAACTCCTGTaGCAGCTCCAGGACATAGTT +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVLHQLL*QLQDIV
Trigger: AACTATGTCCTGGAGCTGGCACAGGAGTTGATGGAG...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGTTCCCTAATTGGCTGTaGAGACTTCCCAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVFPNWL*RLPSSP
Trigger: TGGAGAGCTGGGAAGTCTGCACAGCCAATTAGGGAA...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAACGGGGCCGCTGGAGTaGATCAGGCCCCCTTCCATG +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGTGPLE*IRPPSM
Trigger: CATGGAAGGGGGCCTGATGCACTCCAGCGGCCCCGT...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGCACGCTCCGGGTGCTaGAGGATCTCTGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGARSGC*RISVRA
Trigger: GGCCCTCACAGAGATCCTGCAGCACCCGGAGCGTGC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCGACCGGTCATGGTCCTaGCGTCCTCCGGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTDRSWS*RPPGPP
Trigger: TGGAGGCCCCGGAGGACGGCAGGACCATGACCGGTC...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGCCCAGCTGCTGCTCATaGTATTGTTTAGCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVPSCCS*YCLALS
Trigger: GGAGAGAGCTAAACAATACCATGAGCAGCAGCTGGG...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGTGCAGCTCCTGCCGATaGTATTTGACCGCCTGGTCG +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRCSSCR*YLTAWS
Trigger: CGACCAGGCGGTCAAATACCATCGGCAGGAGCTGCA...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCGCCCGGGCCTCGCTCTaGATGTCTCGTAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTARASL*MSRSSR
Trigger: CCGGGAGCTACGAGACATCCAGAGCGAGGCCCGGGC...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGTGTAGATCAAGCTGGTaGTACTGCAGGGCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVCRSSW*YCRAVS
Trigger: TGACACAGCCCTGCAGTACCACCAGCTTGATCTACA...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCCCTCGGCCGATGGCATaGGCCCCCACAGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTPRPMA*APTATC
Trigger: ACAGGTGGCTGTGGGGGCCCATGCCATCGGCCGAGG...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTCTGCCCACTAGGGGCTaGCAGCCCAGCAGCTCGGAC +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFLPTRG*QPSSSD
Trigger: GTCCGAGCTGCTGGGCTGCCAGCCCCTAGTGGGCAG...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGTTGCTGTTGGACTCCTaGGAGGAGCCAAGCACCACC +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRLLLDS*EEPSTT
Trigger: GGTGGTGCTTGGCTCCTCCCAGGAGTCCAACAGCAA...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTGGCAGGCCACTGGTTaGGGGGTCCAGCCGGAAGCC +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFWQATG*GVQPEA
Trigger: GGCTTCCGGCTGGACCCCCCAACCAGTGGCCTGCCA...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGGGTTGGGGTTGTTTGTaGTCTGGTGAGAAGCATGTG +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVGWGCL*SGEKHV
Trigger: CACATGCTTCTCACCAGACCACAAACAACCCCAACC...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGTTTGGAAGGGTGAGTTaGGGCTGGGAATCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVFGRVS*GWESES
Trigger: TGACTCTGATTCCCAGCCCCAACTCACCCTTCCAAA...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCTCCATGTGCTGCTGGTaGCCCAGGCCAGGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTSMCCW*PRPGGR
Trigger: GCGGCCACCTGGCCTGGGCCACCAGCAGCACATGGA...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGAAGTCACTCAGCTCCTaGTATACCTCCAGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVKSLSS*YTSSSC
Trigger: ACAGGAACTGGAGGTATATCAGGAGCTGAGTGACTT...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGCAGCCAGGTGCCCATaGGCTCTGCACTCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIAARCP*ALHSPG
Trigger: GCCAGGGGAGTGCAGAGCTCATGGGCACCTGGCTGC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGGACCTGAATGGGAGCTaGTGCCAAGTCCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRDLNGS*CQVLLL
Trigger: AAGGAGCAGGACTTGGCATCAGCTCCCATTCAGGTC...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCCAGTGGGAAGGTGTCTaGGGAGGGGCAGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTQWEGV*GGAGPQ
Trigger: CTGTGGCCCTGCCCCTCCTCAGACACCTTCCCACTG...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGTGCTGCTCATGGCACTaGACAGCATTCTCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVCCSWH*TAFSKS
Trigger: TGACTTTGAGAATGCTGTGCAGTGCCATGAGCAGCA...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGGCTCTCTCCAAATCCTaGATGCACCTGGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRALSKS*MHLAAW
Trigger: CCATGCTGCCAGGTGCATGCAGGATTTGGAGAGAGC...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGGGATCCTTCAGCTTTTaGCCTAGATCCAGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVGSFSF*PRSSCS
Trigger: AGAGCAACTGGATCTAGGGCAAAAGCTGAAGGATCC...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGTTGGCAAACGAGCTCTaGCTCCTGGGAAGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRLANEL*LLGREE
Trigger: CTCCTCTCTTCCCAGGAGGCAGAGCTCGTTTGCCAA...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAACGGGGCCGCTGGAGTaGATCAGGCCCCCTTCCATG +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLTGPLE*IRPPSM
Trigger: CATGGAAGGGGGCCTGATGCACTCCAGCGGCCCCGT...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCGCACGCTCCGGGTGCTaGAGGATCTCTGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTARSGC*RISVRA
Trigger: GGCCCTCACAGAGATCCTGCAGCACCCGGAGCGTGC...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGCAGGGACTGGAGTGTaGTGCTGCACTGCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGAGTGV*CCTAGA
Trigger: GGCTCCAGCAGTGCAGCAGCACACTCCAGTCCCTGC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGACCGGTCATGGTCCTaGCGTCCTCCGGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIDRSWS*RPPGPP
Trigger: TGGAGGCCCCGGAGGACGGCAGGACCATGACCGGTC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGCTGAGGTGGTGGGGCTaGTATATCCGGAACTCACCT +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRLRWWG*YIRNSP
Trigger: AGGTGAGTTCCGGATATAGCAGCCCCACCACCTCAG...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCGCGAGGTGGTCTCGGTaGGCCAGTGTCCGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTARWSR*ASVRWE
Trigger: CTCCCAACGGACACTGGCGCACCGAGACCACCTCGC...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGATGGCTGTGTACACGTaGCCCAGACTGCTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRMAVYT*PRLLKA
Trigger: AGCCTTGAGCAGTCTGGGCCACGTGTACACAGCCAT...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGTGGTATTTGACCGCCTaGTCGTACATGCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRWYLTA*SYMPRA
Trigger: TGCCCTGGGCATGTACGACCAGGCGGTCAAATACCA...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCTCTGCACCACCTTCATaGCCTCCCCCAGGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASISAPPS*PPPGRR
Trigger: GCGCCGCCCTGGGGGAGGCCATGAAGGTGGTGCAGA...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGCTGCCAGGAACTCGTaGCATCCCGGGAGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIAARNS*HPGSRH
Trigger: GTGGCGGCTCCCGGGATGCCACGAGTTCCTGGCAGC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGTCTGGGGAGGCAGCTaGCTCCTAGGCAGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGVWGGS*LLGRVD
Trigger: ATCCACCCTGCCTAGGAGCCAGCTGCCTCCCCAGAC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGTGGACATCTCTGAGGTaGTGGGGCTGCTATATCCGG +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRWTSLR*WGCYIR
Trigger: CCGGATATAGCAGCCCCACCACCTCAGAGATGTCCA...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGAGTTTAAAGAGAGGCTaGTCCAGCTGGGAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVSLKRG*SSWEVC
Trigger: ACAGACTTCCCAGCTGGACCAGCCTCTCTTTAAACT...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAGTGAGCCCAGCGAGGTaGTCTCGGTGCGCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLVSPAR*SRCASV
Trigger: GACACTGGCGCACCGAGACCACCTCGCTGGGCTCAC...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGGCAGCCTTTGGACGTaGTGGTGCCCCTCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFGSLWT*WCPSPA
Trigger: TGCAGGCGAGGGGCACCACCACGTCCAAAGGCTGCC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTCATGATGGCCTAGGCTaGCGAGCACCCGCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFHDGLG*RAPAAR
Trigger: CCTTGCAGCGGGTGCTCGTCAGCCTAGGCCATCATG...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGCCAGGGCTTCATCATaGTGGCCTAGGCTGACGAGC +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGARASS*WPRLTS
Trigger: GCTCGTCAGCCTAGGCCATCATGATGAAGCCCTGGC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGACCATCTCTAAGATCTaGTCAATAGTGACTGGGGAG +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVTISKI*SIVTGE
Trigger: CTCCCCAGTCACTATTGATCAGATCTTAGAGATGGT...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGCTGGCACAGGCCCTTaGGTAGTGAGACTCCACCCC +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFAGTGP*VVRLHP
Trigger: GGGGTGGAGTCTCACTACTCAAGGGCCTGTGCCAGC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAACTTGGACTGCACGCTaGGGGAGCGGATGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGTWTAR*GSGWKG
Trigger: TCCCTTCCATCCGCTCCCTCAGCGTGCAGTCCAAGT...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGACAGAGCACAGCATCATaGGGGTGCTGGTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGQSTAS*GCWWLW
Trigger: CCACAGCCACCAGCACCCTCATGATGCTGTGCTCTG...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGCTTAGCTCATGGCTGTaGAAAACCAGACCGCTGACC +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRLSSWL*KTRPLT
Trigger: GGTCAGCGGTCTGGTTTTTCACAGCCATGAGCTAAG...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGGCCTTGGCTTGGTCTTaGATGCGATTCAGACTCTGC +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRALAWS*MRFRLC
Trigger: GCAGAGTCTGAATCGCATGCAAGACCAAGCCAAGGC...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGAAACTTCACAATTCCTaGCCCAGGAGCCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRKLHNS*PRSQQP
Trigger: TGGCTGCTGGCTCCTGGGGCAGGAATTGTGAAGTTT...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAGGCCGAAGGAGCTCTTaGTGCTGGCAGGGTTGCCGT +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLGRRSS*CWQGCR
Trigger: ACGGCAACCCTGCCAGCAGCAAGAGCTCCTTCGGCC...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGACCTGCCAGCCAGGGATaGCGCCCACTTTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGPASQG*RPLCSP
Trigger: TGGAGAACAAAGTGGGCGGCATCCCTGGCTGGCAGG...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAACTGGAGTGTGCTGCTaGACTGCTGGAGCCGGTCGC +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLTGVCC*TAGAGR
Trigger: GCGACCGGCTCCAGCAGTGCAGCAGCACACTCCAGT...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGCTGATGCCAAGTCCTaGTCCTTCTCGCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGADAKS*SFSPAW
Trigger: CCAGGCTGGCGAGAAGGAGCAGGACTTGGCATCAGC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGATGGCCGGCCACTGTaGTGGCTCGGGCTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFDGRPL*WLGLSL
Trigger: CAAAGACAGCCCGAGCCAGCACAGTGGCCGGCCATC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGCGAGGTGGTCTCGGTaGGCCAGTGTCCGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIARWSR*ASVRWE
Trigger: CTCCCAACGGACACTGGCGCACCGAGACCACCTCGC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCGTCTGCTCCATGTGCTaGTGGTGGCCCAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTVCSMC*WWPRPG
Trigger: ACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGAC...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTCAGGTCTGCTCCATGTaGTGCTGGTGGCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFQVCSM*CWWPRP
Trigger: TGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTG...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCCAGGTCTGCTCCATGTaGTGCTGGTGGCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTQVCSM*CWWPRP
Trigger: TGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTG...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGGCTGCAGTGATCATATaGTGGAGCGTCACTGGGACA +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRAAVII*WSVTGT
Trigger: TGTCCCAGTGACGCTCCAGCATATGATCACTGCAGC...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGGGCCTCCCGGACACTaGCAATGTGCTGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIGPPGH*QCAAPG
Trigger: CCCTGGAGCAGCACATTGCCAGTGTCCGGGAGGCCC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGACTTGGAGGGCAGGATTaGGCAGACCCAGCAGGGACT +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGLGGQD*ADPAGT
Trigger: AGTCCCTGCTGGGTCTGCCCAATCCTGCCCTCCAAG...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCTTCTTGGACCGGTCATaGTCCTGCCGTCCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTFLDRS*SCRPPG
Trigger: CCCCGGAGGACGGCAGGACCATGACCGGTCCAAGAA...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGGCCCTGTGGAATGCTaGGGTGTGCTCTGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGGPVEC*GVLCQN
Trigger: GTTCTGGCAGAGCACACCCCAGCATTCCACAGGGCC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGGGAGGGGCTTTCGGTaGAGCTCCGTCATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFGRGFR*SSVMLL
Trigger: CAGCAGCATGACGGAGCTCCACCGAAAGCCCCTCCC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTGTGTGGCTGGGAGGTaGCAGAATCGGCACGGGCCA +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFCVAGR*QNRHGP
Trigger: TGGCCCGTGCCGATTCTGCCACCTCCCAGCCACACA...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTACCACAGAGGCCCCATaGTGGCCAGCTGTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFTTEAP*WPAVRS
Trigger: ACTCCTGACAGCTGGCCATCATGGGGCCTCTGTGGT...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGAATTCAGCAGAGCCTTaGATGCTAGGCCCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRNSAEP*MLGPSC
Trigger: GCAACTTGGGCCTAGCATTCAAGGCTCTGCTGAATT...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGGAGGGCGAAAGGAATaGGGTAGAGCTCCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFGGRKE*GRAPPP
Trigger: TGGAGGGGGAGCTCTACCTCATTCCTTTCGCCCTCC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAGCCACAGCTGGACGCTaGTGGAGACCTGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLATAGR*WRPEWE
Trigger: CTCCCATTCAGGTCTCCATCAGCGTCCAGCTGTGGC...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCAGGAGCTGTCAAGGCTaGGGCGCTTGGGTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTRSCQG*GAWVAQ
Trigger: CTGAGCTACCCAAGCGCCTCAGCCTTGACAGCTCCT...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCCAGAGCACAGCATCATaGGGGTGCTGGTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTQSTAS*GCWWLW
Trigger: CCACAGCCACCAGCACCCTCATGATGCTGTGCTCTG...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGGATGCTCGCCCCTCTaGAGCCCGGTCCTTGAGATC +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIGCSPL*SPVLEI
Trigger: GATCTCAAGGACCGGGCTGCAGAGGGGCGAGCATCC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGGCCATGGCGAATTTTTaGCTCATCTTCTCTTCGGCC +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRAMANF*LIFSSA
Trigger: GGCCGAAGAGAAGATGAGGCAAAAATTCGCCATGGC...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTATCACTGGCATCGTCCTaGACCCGCAAGGACTCAGGG +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLSLASS*TRKDSG
Trigger: CCCTGAGTCCTTGCGGGTGCAGGACGATGCCAGTGA...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCAGCTTCACAGGCAGCTaGAGGTCCAGGACGTCGGCG +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASISFTGS*RSRTSA
Trigger: CGCCGACGTCCTGGACCTGCAGCTGCCTGTGAAGCT...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGGGACTGGAGTGTGCTaGTGCACTGCTGGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIGTGVC*CTAGAG
Trigger: ACCGGCTCCAGCAGTGCAGCAGCACACTCCAGTCCC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGATGGCCGGCCACTGTaGTGGCTCGGGCTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIDGRPL*WLGLSL
Trigger: CAAAGACAGCCCGAGCCAGCACAGTGGCCGGCCATC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGTCCTCCTTCTTATTGTaGCGTGGTGACAAATTCAAC +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVSSFLL*RGDKFN
Trigger: GTTGAATTTGTCACCACGGCACAATAAGAAGGAGGA...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCGCCAGGCCCCCATCTaGAGGCTGCTCAGAGTCAGT +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIRQAPI*RLLRVS
Trigger: ACTGACTCTGAGCAGCCTGCAGATGGGGGCCTGGCG...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGCTCACAGAGGCAGGTaGTGGGATTGTGGGGACCTG +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFAHRGR*WDCGDL
Trigger: CAGGTCCCCACAATCCCAGCACCTGCCTCTGTGAGC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGGGCCAGGGACCGGCTaGAGTGATCATATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFGPGTG*SDHMLE
Trigger: CTCCAGCATATGATCACTGCAGCCGGTCCCTGGCCC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGTGGGCAATGCACAGGTaGGTCTTGTGGAGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRWAMHR*VLWSFS
Trigger: ACTGAAACTCCACAAGACCCACCTGTGCATTGCCCA...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCCTCGGCCCTGGCACGTaGGGTTGTTGGTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTLGPGT*GCWFPL
Trigger: CAGAGGAAACCAACAACCCCACGTGCCAGGGCCGAG...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGACACTGCTGCTGGCCTaGAAGTCACTTGAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRTLLLA*KSLEFS
Trigger: GGAAAACTCAAGTGACTTCCAGGCCAGCAGCAGTGT...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGATGGACGCATTCAGCCTaGGTCAGGGCACTCATGACC +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGWTHSA*VRALMT
Trigger: GGTCATGAGTGCCCTGACCCAGGCTGAATGCGTCCA...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAAGGAGCTCTTGCTGCTaGCAGGGTTGCCGTCCATGC +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLRSSCC*QGCRPC
Trigger: GCATGGACGGCAACCCTGCCAGCAGCAAGAGCTCCT...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGATTGCTGTTGGACTCCTaGGAGGAGCCAAGCACCACC +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGLLLDS*EEPSTT
Trigger: GGTGGTGCTTGGCTCCTCCCAGGAGTCCAACAGCAA...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGAAGAAGACAGCCGCTaGCAGGCCACTGGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIEEDSR*QATGWG
Trigger: CCCCCAACCAGTGGCCTGCCAGCGGCTGTCTTCTTC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCTTCTTGGACCGGTCATaGTCCTGCCGTCCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIFLDRS*SCRPPG
Trigger: CCCCGGAGGACGGCAGGACCATGACCGGTCCAAGAA...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGACCGGCTGTCCCAGGTTaGGGTTGTTTGTGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGPAVPG*GCLWSG
Trigger: ACCAGACCACAAACAACCCCAACCTGGGACAGCCGG...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAAGACAGCAGTGCTGCTaGGCGCCTGAACGCCGTCTT +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLRQQCC*APERRL
Trigger: AAGACGGCGTTCAGGCGCCCAGCAGCACTGCTGTCT...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCAGACAGCAGTGCTGCTaGGCGCCTGAACGCCGTCTT +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTRQQCC*APERRL
Trigger: AAGACGGCGTTCAGGCGCCCAGCAGCACTGCTGTCT...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTATCCGGAACTCACCTTaGGCAGGGAGGAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFIRNSP*AGRSSW
Trigger: CCAGGAGCTCCTCCCTGCCCAAGGTGAGTTCCGGAT...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGTGGAAGGCGGGATTCTaGTTAAATCTAGTTAGCCAT +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVWKAGF*LNLVSH
Trigger: ATGGCTAACTAGATTTAACCAGAATCCCGCCTTCCA...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGTGTCTTGCCTCAAGCTaGCAACAATTTAAGTTACCG +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVCLASS*QQFKLP
Trigger: CGGTAACTTAAATTGTTGCCAGCTTGAGGCAAGACA...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCTGTGTGGCTGGGAGGTaGCAGAATCGGCACGGGCCA +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASICVAGR*QNRHGP
Trigger: TGGCCCGTGCCGATTCTGCCACCTCCCAGCCACACA...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTATGTGTGGAGGCCTGTaGGGCGCGGTCATTCACTTC +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFMCGGL*GAVIHF
Trigger: GAAGTGAATGACCGCGCCTCACAGGCCTCCACACAT...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCTCCTTCCATGTCTTaGAGGTCGGGAGCAAGCCGG +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFSPSMS*RSGASR
Trigger: CCGGCTTGCTCCCGACCTTCAAGACATGGAAGGAGA...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGGGAAGCCCACAGCGGTaGGGAGGGCCTGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQGSPQR*GGPASQ
Trigger: CTGGCTGGCAGGCCCTCCTCACCGCTGTGGGCTTCC...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGCCACAGCTGGACGCTaGTGGAGACCTGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIATAGR*WRPEWE
Trigger: CTCCCATTCAGGTCTCCATCAGCGTCCAGCTGTGGC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACAGAGATGGCATCTaGGGCGATGCTGTCCGCACC +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIHRDGI*GDAVRT
Trigger: GGTGCGGACAGCATCGCCTCAGATGCCATCTCTGTG...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGATAGTTGCCAACCCCTaGTCTACACAAAGAAATCTT +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVIVANP*STQRNL
Trigger: AAGATTTCTTTGTGTAGATCAGGGGTTGGCAACTAT...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGGGCCACAGGTGTCCTaGCAGGGAACATCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGGPQVS*QGTSLK
Trigger: CTTCAAAGATGTTCCCTGTCAGGACACCTGTGGCCC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGAGGCTGCAGATCTATTaGTGTATAAGATGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVRLQIY*CIRCSS
Trigger: AGAACTGCATCTTATACAGCAATAGATCTGCAGCCT...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397906.6
CDS-3UTR GCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCAGATGCAAAGGCTaGCAGGGCATCGGCATGACG +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFSRCKG*QGIGMT
Trigger: CGTCATGCCGATGCCCTGGCAGCCTTTGCATCTGGA...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAAGGCACTGCCCAGGTTaGTATAAGCCCGGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLRHCPG*YKPGPL
Trigger: AAGAGGCCCGGGCTTATAGCAACCTGGGCAGTGCCT...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTACCGCCTGGTCGTACATaGCCAGGGCATTGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLPPGRT*PGHCRH
Trigger: ATGCCTACAATGCCCTGGGCATGTACGACCAGGCGG...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTCCGCCTGGTCGTACATaGCCAGGGCATTGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFPPGRT*PGHCRH
Trigger: ATGCCTACAATGCCCTGGGCATGTACGACCAGGCGG...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGGTTGCAGTAGGCTTTTaGTTGGCTCAACTTGTCGTG +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRVAVGF*LAQLVV
Trigger: CACGACAAGTTGAGCCAAGCAAAAGCCTACTGCAAC...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGGGATCCTTCAGCTTTTaGCCTAGATCCAGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRGSFSF*PRSSCS
Trigger: AGAGCAACTGGATCTAGGGCAAAAGCTGAAGGATCC...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTACACACAAGGGCTTGCTaGAAGCTCCCCATTGCCCTG +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLHTRAC*KLPIAL
Trigger: CAGGGCAATGGGGAGCTTGCAGCAAGCCCTTGTGTG...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGTCTCTTCGGCCCAGTTaGTCAGCTAACCTTAAACCT +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRSLRPS*SANLKP
Trigger: AGGTTTAAGGTTAGCTGAGCAACTGGGCCGAAGAGA...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCTGTCCGTCCCCTTTCTaGCACAGCCAGGGCTTCATC +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTCPSPF*HSQGFI
Trigger: GATGAAGCCCTGGCTGTGGCAGAAAGGGGACGGACA...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAAAGGCCTTGCTGCTCTaGACCACCTTCATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLKALLL*TTFMAS
Trigger: GGAGGCCATGAAGGTGGTGCAGAGCAGCAAGGCCTT...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGGTGCGAGAAGGCCTTaGTGCTCTGCACCACCTTCA +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFGARRP*CSAPPS
Trigger: TGAAGGTGGTGCAGAGCAGCAAGGCCTTCTCGCACC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGACCATTCTGGATGCGCTaGAGGGATTTCTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGPFWMR*RDFSTR
Trigger: CCTGGTGGAGAAATCCCTGCAGCGCATCCAGAATGG...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGCTGCCCATTCTGGATaGGCTGCAGGGATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGAAHSG*AAGISP
Trigger: TGGAGAAATCCCTGCAGCGCATCCAGAATGGGCAGC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCTCACCGAGACTCTCATaGCTCCGGCTGTCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTSPRLS*LRLSQV
Trigger: AACCTGGGACAGCCGGAGGCATGAGAGTCTCGGTGA...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCATTGGCCCTGTGGAATaGTGGGGTGTGCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTIGPVE*WGVLCQ
Trigger: CTGGCAGAGCACACCCCAGCATTCCACAGGGCCAAT...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGAAGCTGGAGACTCTTaGGGTCTTGAGCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGEAGDS*GLEPVQ
Trigger: CTGGACTGGCTCAAGACCCCAAGAGTCTCCAGCTTC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCGGCCCCGGTAAGCCTTaGCTTGGTCTTGCATGCGAT +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTGPGKP*LGLACD
Trigger: ATCGCATGCAAGACCAAGCCAAGGCTTACCGGGGCC...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGAGGAGGTCCCGTCCTaGGTCGGTGACACAGTGTTA +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFEEVPS*VGDTVL
Trigger: TAACACTGTGTCACCGACCCAGGACGGGACCTCCTC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCAGCCGCCATGGATGTaGAGCTGGAGTATGTGGGCG +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIQPPWM*SWSMWA
Trigger: CGCCCACATACTCCAGCTCCACATCCATGGCGGCTG...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTGGACGCATTCAGCCTaGGTCAGGGCACTCATGACC +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFWTHSA*VRALMT
Trigger: GGTCATGAGTGCCCTGACCCAGGCTGAATGCGTCCA...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGATGGACATCTCTGAGGTaGTGGGGCTGCTATATCCGG +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGWTSLR*WGCYIR
Trigger: CCGGATATAGCAGCCCCACCACCTCAGAGATGTCCA...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAAGAGGCTGGTCCAGCTaGGAAGTCTGTGAGTCGCAG +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLRGWSS*EVCESQ
Trigger: CTGCGACTCACAGACTTCCCAGCTGGACCAGCCTCT...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGGCCCTGTGGAATGCTaGGGTGTGCTCTGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIGPVEC*GVLCQN
Trigger: GTTCTGGCAGAGCACACCCCAGCATTCCACAGGGCC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGCAAATGTGTGTGGCTaGGAGGTGGCAGAATCGGCA +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGANVCG*EVAESA
Trigger: TGCCGATTCTGCCACCTCCCAGCCACACACATTTGC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGACAGAACCTCTCAGTTTaGGGCTGCAGGTGCCAATCT +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGQNLSV*GCRCQS
Trigger: AGATTGGCACCTGCAGCCTCAAACTGAGAGGTTCTG...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTCTGTCCTTTACCTGGTaGGCTAAGCCCAGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFLSFTW*AKPSCC
Trigger: GCAGCAACTGGGCTTAGCTCACCAGGTAAAGGACAG...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGCCTCTCCAAGTTCATaGGCAACCACGAGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGASPSS*ATTSLF
Trigger: AAAGAGGCTCGTGGTTGCTCATGAACTTGGAGAGGC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGAAAAAGGCCAGGTATTaGATATTTTATGTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVKKARY*IFYVVW
Trigger: CCACACCACATAAAATATTCAATACCTGGCCTTTTT...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGCAGGGAGAATTGCTTaGACCCAGGAGGAAGAGGTT +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGAGRIA*TQEEEV
Trigger: AACCTCTTCCTCCTGGGTTCAAGCAATTCTCCCTGC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGAGTCTATCCACTACCTaGCTTGCTTTTCCTAGACTG +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRSLSTT*LAFPRL
Trigger: CAGTCTAGGAAAAGCAAGTCAGGTAGTGGATAGACT...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGGGCCACAGGTGTCCTaGCAGGGAACATCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFGPQVS*QGTSLK
Trigger: CTTCAAAGATGTTCCCTGTCAGGACACCTGTGGCCC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCTCCAGATGCAAAGGCTaGCAGGGCATCGGCATGACG +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASISRCKG*QGIGMT
Trigger: CGTCATGCCGATGCCCTGGCAGCCTTTGCATCTGGA...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTTGAGCCAGTCCAGATaGAAAGGCTGCCAGGGCATC +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFLSQSR*KGCQGI
Trigger: GATGCCCTGGCAGCCTTTGCATCTGGACTGGCTCAA...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGATCTCCAAATCCTGCATaGACCTGGCAGCATGGCCTA +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGSPNPA*TWQHGL
Trigger: TAGGCCATGCTGCCAGGTGCATGCAGGATTTGGAGA...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGAGATCTGCAGCTCCTaGCGATGGTATTTGACCGCC +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFEICSS*RWYLTA
Trigger: GGCGGTCAAATACCATCGGCAGGAGCTGCAGATCTC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGAAGGTCTTTAGCCAGTaGCAGATCCTGTTCGTAGTA +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRKVFSQ*QILFVV
Trigger: TACTACGAACAGGATCTGGCACTGGCTAAAGACCTT...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTCTGCAAGCTCCCCATTaGCCTGTGTCCATTTCCCAG +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFLQAPH*PVSISQ
Trigger: CTGGGAAATGGACACAGGGCAATGGGGAGCTTGCAG...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGTCCGTGCTCAGCTGTaGCTCATGTCGGATTGTTTC +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGVRAQL*LMSDCF
Trigger: GAAACAATCCGACATGAGGCACAGCTGAGCACGGAC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTCCATTCTGGATGCGCTaGAGGGATTTCTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFPFWMR*RDFSTR
Trigger: CCTGGTGGAGAAATCCCTGCAGCGCATCCAGAATGG...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCTACATGGCATTGCGCTaGCCATTCTGGATGCGCTGC +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTYMALR*PFWMRC
Trigger: GCAGCGCATCCAGAATGGGCAGCGCAATGCCATGTA...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTCTTCTTCATCTTTGTTaGCTGCAGGGCGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFLLHLC*LQGGSG
Trigger: CCCAGACCCGCCCTGCAGGCAACAAAGATGAAGAAG...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTCTGAGGTGGTGGGGCTaGTATATCCGGAACTCACCT +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFLRWWG*YIRNSP
Trigger: AGGTGAGTTCCGGATATAGCAGCCCCACCACCTCAG...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGCAGAGGGTGGGGCATaGCAGTTTCCTGAGCTAAAA +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGAEGGA*QFPELK
Trigger: TTTTAGCTCAGGAAACTGGCATGCCCCACCCTCTGC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCGAAGCTGGAGACTCTTaGGGTCTTGAGCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTEAGDS*GLEPVQ
Trigger: CTGGACTGGCTCAAGACCCCAAGAGTCTCCAGCTTC...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCATGGCTGTGTACACGTaGCCCAGACTGCTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTMAVYT*PRLLKA
Trigger: AGCCTTGAGCAGTCTGGGCCACGTGTACACAGCCAT...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTGGTATTTGACCGCCTaGTCGTACATGCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFWYLTA*SYMPRA
Trigger: TGCCCTGGGCATGTACGACCAGGCGGTCAAATACCA...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGATCTCTTCAAATTGCTaGTCCATGATGTCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRISSNC*SMMSPA
Trigger: AGCGGGAGACATCATGGACCAGCAATTTGAAGAGAT...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCGGCCCACGGGGCCGCTaGAGTGCATCAGGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPGPRGR*SASGPL
Trigger: AAGGGGGCCTGATGCACTCCAGCGGCCCCGTGGGCC...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTCCATGGATGTGGAGCTaGAGTATGTGGGCGGGTTCT +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFPWMWS*SMWAGS
Trigger: AGAACCCGCCCACATACTCCAGCTCCACATCCATGG...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGCCCCCAGGGCGGCGCTaGCTTTCAGGCCGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQPPGRR*LSGRSA
Trigger: TGCTGAACGGCCTGAAAGCCAGCGCCGCCCTGGGGG...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTTGCGCTGCCCATTCTaGATGCGCTGCAGGGATTTC +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFLRCPF*MRCRDF
Trigger: GAAATCCCTGCAGCGCATCCAGAATGGGCAGCGCAA...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGTGGCAGGCCACTGGTTaGGGGGTCCAGCCGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQWQATG*GVQPEA
Trigger: GGCTTCCGGCTGGACCCCCCAACCAGTGGCCTGCCA...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCGTCGCAGCCGGGCGATaGCCGGCCACTGTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPVAAGR*PATVLA
Trigger: AGCCAGCACAGTGGCCGGCCATCGCCCGGCTGCGAC...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTACCGGAAGATCTTCATTaGCCCTGTGGAATGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLPEDLH*PCGMLG
Trigger: CCCCAGCATTCCACAGGGCCAATGAAGATCTTCCGG...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAATGCTGGAGCGTCACTaGGACAGAGAGAGCAGGATG +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLMLERH*DRESRM
Trigger: CATCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCAT...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCAGACTCTTGGGGTCTTaGGCCAGTCCAGATGCAAAG +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTRLLGS*ASPDAK
Trigger: CTTTGCATCTGGACTGGCTCAAGACCCCAAGAGTCT...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTACAGAACCTCTCAGTTTaGGGCTGCAGGTGCCAATCT +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLQNLSV*GCRCQS
Trigger: AGATTGGCACCTGCAGCCTCAAACTGAGAGGTTCTG...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGACTGCCTCTCGATCTTTaGGTTTCATGGCGAGTACCA +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGLPLDL*VSWRVP
Trigger: TGGTACTCGCCATGAAACTCAAAGATCGAGAGGCAG...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAAATTCAGCAGAGCCTTaGATGCTAGGCCCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGNSAEP*MLGPSC
Trigger: GCAACTTGGGCCTAGCATTCAAGGCTCTGCTGAATT...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAAGGCCTGGGCTTTATTaGAGGCCTCTCCAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGRPGLY*RPLQVH
Trigger: ATGAACTTGGAGAGGCCTTCAATAAAGCCCAGGCCT...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTATCCAAGGCTACTATATaGCACCGTCTTGGCCGCCAA +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLSKATI*HRLGRQ
Trigger: TTGGCGGCCAAGACGGTGTCATATAGTAGCCTTGGA...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGCTTCCTGTAAGTACATaGCTGCTTGGGAATAGTTCT +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRLPVST*LLGNSS
Trigger: AGAACTATTCCCAAGCAGTCATGTACTTACAGGAAG...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTCAAGGCCTGGTAGGATaGTGTCTGCAGGTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFQGLVG*CLQVKE
Trigger: CTCTTTGACCTGCAGACATCATCCTACCAGGCCTTG...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGCGTCCATGCTGGGCGTaGGGACCAAGGCCGACAGCT +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQRPCWA*GPRPTA
Trigger: AGCTGTCGGCCTTGGTCCTCACGCCCAGCATGGACG...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGACCTGAATGGGAGCTaGTGCCAAGTCCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIDLNGS*CQVLLL
Trigger: AAGGAGCAGGACTTGGCATCAGCTCCCATTCAGGTC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGGAGACAAAGCTCATTaGGGAGGCAATGGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFGDKAH*GGNGAQ
Trigger: CTGAGCTCCATTGCCTCCTCAATGAGCTTTGTCTCC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCACCGCAATGAGATaGCTCTGTGTCTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFSTAMR*LCVSSR
Trigger: TCTGGAGGAGACACAGAGTCATCTCATTGCGGTGGA...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGAACGCACTGGTTTCTaGCGCTCTGAAGACAGCAGT +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFERTGF*RSEDSS
Trigger: ACTGCTGTCTTCAGAGCGTCAGAAACCAGTGCGTTC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAACACTGAGGAACAGGTaGGATTGTCAGTGTATGCGC +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGTLRNR*DCQCMR
Trigger: GCGCATACACTGACAATCTCACCTGTTCCTCAGTGT...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTCAGCTACTTAGAGGCTaGGGCAGGGAGAATTGCTTG +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFQLLRG*GRENCL
Trigger: CAAGCAATTCTCCCTGCCTCAGCCTCTAAGTAGCTG...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGGGCATGCCAGTTTCCTaGGCTAAAAGGAAATATATG +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRGMPVS*AKRKYM
Trigger: CATATATTTCCTTTTAGCTCAGGAAACTGGCATGCC...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGAGATCTGCAGCTCCTaGCGATGGTATTTGACCGCC +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIEICSS*RWYLTA
Trigger: GGCGGTCAAATACCATCGGCAGGAGCTGCAGATCTC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCTGGCTTGGTCTTGCATaGGATTCAGACTCTGCGCGA +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTWLGLA*DSDSAR
Trigger: TCGCGCAGAGTCTGAATCGCATGCAAGACCAAGCCA...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAGCCTTGGCTTGGTCTTaGATGCGATTCAGACTCTGC +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLALAWS*MRFRLC
Trigger: GCAGAGTCTGAATCGCATGCAAGACCAAGCCAAGGC...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCAAACTTCACAATTCCTaGCCCAGGAGCCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTKLHNS*PRSQQP
Trigger: TGGCTGCTGGCTCCTGGGGCAGGAATTGTGAAGTTT...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAGAAGGGTTACACTGCTaGTGGCCTGGAAGTCACTTG +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLEGLHC*WPGSHL
Trigger: CAAGTGACTTCCAGGCCAGCAGCAGTGTAACCCTTC...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCTTGGCAAACGAGCTCTaGCTCCTGGGAAGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASILANEL*LLGREE
Trigger: CTCCTCTCTTCCCAGGAGGCAGAGCTCGTTTGCCAA...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCTACATGGCATTGCGCTaGCCATTCTGGATGCGCTGC +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIYMALR*PFWMRC
Trigger: GCAGCGCATCCAGAATGGGCAGCGCAATGCCATGTA...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAATGTGTACATGGCATTaGGCTGCCCATTCTGGATGC +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGMCTWH*AAHSGC
Trigger: GCATCCAGAATGGGCAGCGCAATGCCATGTACACAT...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCGCCCGGCTGATGAGCTaGTCGCCCGTCTCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPARLMS*SPVSEA
Trigger: TGCCTCCGAGACGGGCGAGCAGCTCATCAGCCGGGC...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGATGGAATGCTGGGGTGTaGTCTGCCAGAACATCTTCA +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGWNAGV*SARTSS
Trigger: TGAAGATGTTCTGGCAGAGCACACCCCAGCATTCCA...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGGACCCAAAAGACATTTaGAGAGCAGAGTTCAGAATG +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRDPKDI*RAEFRM
Trigger: CATTCTGAACTCTGCTCTGCAAATGTCTTTTGGGTC...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCTATGCAGGAGGCATTTaGTTCCATCCACGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTYAGGI*FHPRGP
Trigger: AGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATA...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGACAGTTTTCACTTGTTaGCTACTTACTGAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVTVFTC*LLTESK
Trigger: TTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGT...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTCGAGGGAGTCTCTCATaGGAGATTTCATGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFRGSLS*EISWRL
Trigger: AAGCCGCCATGAAATCTCCCATGAGAGACTCCCTCG...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGGTCACCTAAGGTCTTaGCTACATCCAAGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGGHLRS*LHPSPA
Trigger: AGCAGGACTTGGATGTAGCCAAGACCTTAGGTGACC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTCGGCATTCTCCTGTCTaGTCACCTAAGGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFRHSPV*SPKVLA
Trigger: AGCCAAGACCTTAGGTGACCAGACAGGAGAATGCCG...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGGTCATTCACTTCCATaGAGATCTGCAGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFGHSLP*RSAAPA
Trigger: GGCAGGAGCTGCAGATCTCCATGGAAGTGAATGACC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGGCTCAAAGTAGCCAATaGCTTCTTCCATCACATTCA +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRAQSSQ*LLPSHS
Trigger: TGAATGTGATGGAAGAAGCCATTGGCTACTTTGAGC...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTCTGATCAATAGTGACTaGGGAGTAGGGGTCGGAGTC +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFLINSD*GVGVGV
Trigger: GACTCCGACCCCTACTCCCCAGTCACTATTGATCAG...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGGGTTACACTGCTGCTaGCCTGGAAGTCACTTGAGT +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFGLHCC*PGSHLS
Trigger: ACTCAAGTGACTTCCAGGCCAGCAGCAGTGTAACCC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCTCTCTGTCTCACTGCTaGCACAGGCCCTTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTSLSHC*HRPLSS
Trigger: ACTACTCAAGGGCCTGTGCCAGCAGTGAGACAGAGA...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCAGGCTCGTCATGCTCTaGCAGCTCCTGTTAAACAGG +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTRLVML*QLLLNR
Trigger: CCTGTTTAACAGGAGCTGCCAGAGCATGACGAGCCT...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGCACGGAGCGGGGGCTTaGCAAACGAGCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQHGAGA*QTSSAS
Trigger: GGAGGCAGAGCTCGTTTGCCAAGCCCCCGCTCCGTG...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGGCCCACGGGGCCGCTaGAGTGCATCAGGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAGPRGR*SASGPL
Trigger: AAGGGGGCCTGATGCACTCCAGCGGCCCCGTGGGCC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGCTCTTCCTCGGCCGATaGCATGGGCCCCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQLFLGR*HGPPQP
Trigger: TGGCTGTGGGGGCCCATGCCATCGGCCGAGGAAGAG...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAAGCTTCCAGGAGATGTaGGTGGCAAAGTGGACGCAT +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLSFQEM*VAKWTH
Trigger: ATGCGTCCACTTTGCCACCCACATCTCCTGGAAGCT...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTAGCTTCCAGGAGATGTaGGTGGCAAAGTGGACGCAT +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFSFQEM*VAKWTH
Trigger: ATGCGTCCACTTTGCCACCCACATCTCCTGGAAGCT...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCCCCCCAGGGCGGCGCTaGCTTTCAGGCCGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPPPGRR*LSGRSA
Trigger: TGCTGAACGGCCTGAAAGCCAGCGCCGCCCTGGGGG...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
56% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCTTGCGCTGCCCATTCTaGATGCGCTGCAGGGATTTC +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASILRCPF*MRCRDF
Trigger: GAAATCCCTGCAGCGCATCCAGAATGGGCAGCGCAA...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGATTGAATATTTTATGTaGTGTGGGCCAAAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVIEYFM*CGPKAK
Trigger: TTTTGCCTTTGGCCCACACCACATAAAATATTCAAT...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTAGGATGAGGACAGCGTaGGTGACACCTTTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFRMRTA*VTPLSP
Trigger: AGGAGACAAAGGTGTCACCCACGCTGTCCTCATCCT...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCGCAGTGATCATATGCTaGAGCGTCACTGGGACAGAG +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTAVIIC*SVTGTE
Trigger: CTCTGTCCCAGTGACGCTCCAGCATATGATCACTGC...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCGTCTGCAAATGTGTGTaGCTGGGAGGTGGCAGAATC +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTVCKCV*LGGGRI
Trigger: GATTCTGCCACCTCCCAGCCACACACATTTGCAGAC...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAATGGCGAGTACCAACTaGTGCCTGTGGTTAGTGAGA +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLMASTN*CLWLVR
Trigger: TCTCACTAACCACAGGCATCAGTTGGTACTCGCCAT...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCCTGCCTCTCGATCTTTaGGTTTCATGGCGAGTACCA +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTLPLDL*VSWRVP
Trigger: TGGTACTCGCCATGAAACTCAAAGATCGAGAGGCAG...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGGCTCTTCATAACACTTaGATGCCATTGTGTATTTCC +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRALHNT*MPLCIS
Trigger: GGAAATACACAATGGCATTCAAGTGTTATGAAGAGC...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTAGGCCTGGGCTTTATTaGAGGCCTCTCCAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFRPGLY*RPLQVH
Trigger: ATGAACTTGGAGAGGCCTTCAATAAAGCCCAGGCCT...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TCCTTTATTCCCACATTACAGGAACCCTGCAGGGTAAGAAGCCATCCCCATTTCGCTGGCACAGGCCCTTaGGTAGTGAGACTCCACCCC +
Preference number: 4 (lower is better)
Translates to: SFIPTLQEPCRVRSHPHFAGTGP*VVRLHP
Trigger: GGGGTGGAGTCTCACTACTCAAGGGCCTGTGCCAGC...GAAATGGGGATGGCTTCTTACCCTGCAGGGTTCCTGTAATGTGGGAATAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442232.1
CDS-3UTR TCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTCAAATTGCTGGTCCATaGTGTCTCCCGCTTCACTCT +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFQIAGP*CLPLHS
Trigger: AGAGTGAAGCGGGAGACATCATGGACCAGCAATTTG...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCTCGCCAGCCTGGAGCTaGACCAGCACCTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPSPAWS*TSTWWS
Trigger: GCTCCACCAGGTGCTGGTTCAGCTCCAGGCTGGCGA...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGAGCGCTGTTTCAATGTaGATTATTGCATTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRSAVSM*IIALLL
Trigger: CAGCAACAATGCAATAATTCACATTGAAACAGCGCT...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAACATCCAAGTCCTGCTaGATATATCCGGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGTSKSC*IYPVLF
Trigger: GAAGAGCACCGGATATATGCAGCAGGACTTGGATGT...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGAGTTCATCTTTGGATTaGTTGGCAAGAAGAACACAC +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRSSSLD*LARRTH
Trigger: GTGTGTTCTTCTTGCCAAGCAATCCAAAGATGAACT...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGCTATCTTCAGATGCTaGTCATGGCACTGCACAGCA +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFAIFRC*SWHCTA
Trigger: TGCTGTGCAGTGCCATGAGCAGCATCTGAAGATAGC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGCAATGCCCAGCTGCTaGTCATGGTATTGTTTAGCT +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGAMPSC*SWYCLA
Trigger: AGCTAAACAATACCATGAGCAGCAGCTGGGCATTGC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGGGATGCTCGCCCCTCTaGAGCCCGGTCCTTGAGATC +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQGCSPL*SPVLEI
Trigger: GATCTCAAGGACCGGGCTGCAGAGGGGCGAGCATCC...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGGGCATTGTAGGCATTaGCCATATTCCCATAGGCAC +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFGHCRH*PYSHRH
Trigger: GTGCCTATGGGAATATGGGCAATGCCTACAATGCCC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCGGGCATTGTAGGCATTaGCCATATTCCCATAGGCAC +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTGHCRH*PYSHRH
Trigger: GTGCCTATGGGAATATGGGCAATGCCTACAATGCCC...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTACTTCCATGGAGATCTaGAGCTCCTGCCGATGGTAT +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFTSMEI*SSCRWY
Trigger: ATACCATCGGCAGGAGCTGCAGATCTCCATGGAAGT...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCTGGATCATTCGGTATaGAGTGCCCAGGGCTGCATA +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASILDHSV*SAQGCI
Trigger: TATGCAGCCCTGGGCACTGCATACCGAATGATCCAG...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCAGAGTTTGTAGTCCGTaGTCAGCTGTGCCTCATGTC +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTRVCSP*SAVPHV
Trigger: GACATGAGGCACAGCTGAGCACGGACTACAAACTCT...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCCAGAAGATCAGCAAATaGCCTTGTCCGTCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTQKISK*PCPSPF
Trigger: GAAAGGGGACGGACAAGGGCATTTGCTGATCTTCTG...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTATGTGTACATGGCATTaGGCTGCCCATTCTGGATGC +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFMCTWH*AAHSGC
Trigger: GCATCCAGAATGGGCAGCGCAATGCCATGTACACAT...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGAGTGTGCTGCTGCACTaGTGGAGCCGGTCGCCCGGG +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYASVLLH*WSRSPG
Trigger: CCCGGGCGACCGGCTCCAGCAGTGCAGCAGCACACT...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTGCTGGGGTGTGCTCTaGCAGAACATCTTCAGGTTA +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFCWGVL*QNIFRL
Trigger: TAACCTGAAGATGTTCTGGCAGAGCACACCCCAGCA...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGGTCTGCTCCATGTGCTaGTGGTGGCCCAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQVCSMC*WWPRPG
Trigger: ACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGAC...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTACCTGTGGGTCATAGTTaGCAACCCCTGATCTACACA +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLPVGHS*QPLIYT
Trigger: TGTGTAGATCAGGGGTTGGCAACTATGACCCACAGG...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAAAGAGCCAAGGGCTATaGAGGAGGCATTTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLKSQGL*RRHLLP
Trigger: TGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTT...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGATTCTTCTTGTGGGTCTaGAAATGTGTGTGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGFFLWV*KCVWLG
Trigger: TCCCAGCCACACACATTTGCAGACCCACAAGAAGAA...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTAGTGTCCTACAGCTTGTGAGTGGCAAGGCCAGAGGCTGCACTCTGAGCTCTGAGGTAAGTGTCACCTaGCTTCACTGGCTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: PSVLQLVSGKARGCTLSSEVSVT*LHWLRS
Trigger: ACTTCTCAGCCAGTGAAGGCAGGTGACACTTACCTC...AGAGCTCAGAGTGCAGCCTCTGGCCTTGCCACTCACAAGCTGTAGGACACTAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442232.1
CDS-3UTR CCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGCATCTTTGGATTGCTTaGCAAGAAGAACACACTGTT +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRHLWIA*QEEHTV
Trigger: AACAGTGTGTTCTTCTTGCCAAGCAATCCAAAGATG...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCCCCAGCTGCTGCTCATaGTATTGTTTAGCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTPSCCS*YCLALS
Trigger: GGAGAGAGCTAAACAATACCATGAGCAGCAGCTGGG...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAACACTGCTGCTGGCCTaGAAGTCACTTGAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLTLLLA*KSLEFS
Trigger: GGAAAACTCAAGTGACTTCCAGGCCAGCAGCAGTGT...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGGGTTACACTGCTGCTaGCCTGGAAGTCACTTGAGT +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIGLHCC*PGSHLS
Trigger: ACTCAAGTGACTTCCAGGCCAGCAGCAGTGTAACCC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCTCTCTGTCTCACTGCTaGCACAGGCCCTTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASISLSHC*HRPLSS
Trigger: ACTACTCAAGGGCCTGTGCCAGCAGTGAGACAGAGA...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGGTCTGGGGAGGCAGCTaGCTCCTAGGCAGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQVWGGS*LLGRVD
Trigger: ATCCACCCTGCCTAGGAGCCAGCTGCCTCCCCAGAC...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCACATCTCTGAGGTGGTaGGGCTGCTATATCCGGAAC +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASITSLRW*GCYIRN
Trigger: GTTCCGGATATAGCAGCCCCACCACCTCAGAGATGT...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGGGAGTAGGAGAGAGCTaGGGAGGGTGCACTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQGVGES*GGCTAS
Trigger: GCTGGCAGTGCACCCTCCCCAGCTCTCTCCTACTCC...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGGGGAGGGGCTTTCGGTaGAGCTCCGTCATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQGRGFR*SSVMLL
Trigger: CAGCAGCATGACGGAGCTCCACCGAAAGCCCCTCCC...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGTGCGCCAGTGTCCGTTaGGAGGGGCTTTCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQCASVR*EGLSVE
Trigger: CTCCACCGAAAGCCCCTCCCAACGGACACTGGCGCA...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCAAGGGAACAGGAGCCTaGAAGGCGGGATTCTGGTTA +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIKGTGA*KAGFWL
Trigger: TAACCAGAATCCCGCCTTCCAGGCTCCTGTTCCCTT...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGTGGCCCAGGCCAGGTaGCCGCCCACCTTCATGAGG +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAVAQAR*PPTFMR
Trigger: CCTCATGAAGGTGGGCGGCCACCTGGCCTGGGCCAC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGGCCCTCACATACCCTaGGCTCCCCGGACGCCAGTC +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAGPHIP*APRTPV
Trigger: GACTGGCGTCCGGGGAGCCCAGGGTATGTGAGGGCC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGGCCTGGAAGTCACTTaGGTTTTCCACTGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIGLEVT*VFHCVL
Trigger: GAGAACACAGTGGAAAACTCAAGTGACTTCCAGGCC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCGTGCTGCTCCAGGGCTaGGCCGGTTGCTGTTGGAAG +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPVLLQG*AGCCWK
Trigger: CTTCCAACAGCAACCGGCTCAGCCCTGGAGCAGCAC...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCGGGTCAGGGCACTCATaGCCCTCTCCTTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPGSGHS*PSPWWP
Trigger: TGGCCACCAAGGAGAGGGTCATGAGTGCCCTGACCC...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTGGAAGCCCACAGCGGTaGGGAGGGCCTGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFGSPQR*GGPASQ
Trigger: CTGGCTGGCAGGCCCTCCTCACCGCTGTGGGCTTCC...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGTGGCCGCCGCTCCTCTaGAGACGCTCCACCGCAATG +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAWPPLL*RRSTAM
Trigger: CATTGCGGTGGAGCGTCTTCAGAGGAGCGGCGGCCA...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCTTTGATGGACATCTCTaGGGTGGTGGGGCTGCTATA +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIFDGHL*GGGAAI
Trigger: TATAGCAGCCCCACCACCTCAGAGATGTCCATCAAA...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGCAGCTGGGAAGTCTGTaGGTCGCAGCCGGGCGATGG +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAQLGSL*VAAGRW
Trigger: CCATCGCCCGGCTGCGACTCACAGACTTCCCAGCTG...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAGGACATGTTCCTTGGTaGTTTGGAAATGTGAGCGCT +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLGHVPW*FGNVSA
Trigger: AGCGCTCACATTTCCAAATCACCAAGGAACATGTCC...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGGACATGTTCCTTGGTaGTTTGGAAATGTGAGCGCT +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFGHVPW*FGNVSA
Trigger: AGCGCTCACATTTCCAAATCACCAAGGAACATGTCC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTTCAGAGGAGTACACTaGGGAACAGGTGAGATTGTC +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFFRGVH*GTGEIV
Trigger: GACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAA...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGATTGGCTCTTCAGTATaGAACCTAAAACAACGATGT +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRIGSSV*NLKQRC
Trigger: ACATCGTTGTTTTAGGTTTCATACTGAAGAGCCAAT...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGTTTTCCAGTGTAGCCTaGAACATTCACTGTGATTTT +
Preference number: 4 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRFSSVA*NIHCDF
Trigger: AAAATCACAGTGAATGTTTCAGGCTACACTGGAAAA...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAAGTCTATCCACTACCTaGCTTGCTTTTCCTAGACTG +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGSLSTT*LAFPRL
Trigger: CAGTCTAGGAAAAGCAAGTCAGGTAGTGGATAGACT...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTACATCCAAGTCCTGCTaGATATATCCGGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFTSKSC*IYPVLF
Trigger: GAAGAGCACCGGATATATGCAGCAGGACTTGGATGT...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGCTACATCCAAGTCCTaGTGCATATATCCGGTGCTC +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIATSKS*CIYPVL
Trigger: GAGCACCGGATATATGCAGCAGGACTTGGATGTAGC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCTTTGTGACTGGCCAGTaGATTGGGGTAGTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTFVTGQ*IGVVSN
Trigger: ATTGGAGACTACCCCAATGCACTGGCCAGTCACAAA...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGCTATCTTCAGATGCTaGTCATGGCACTGCACAGCA +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIAIFRC*SWHCTA
Trigger: TGCTGTGCAGTGCCATGAGCAGCATCTGAAGATAGC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAGCAATGCCCAGCTGCTaGTCATGGTATTGTTTAGCT +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLAMPSC*SWYCLA
Trigger: AGCTAAACAATACCATGAGCAGCAGCTGGGCATTGC...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCTTTCCACTTAGCTGCTaGAGCATGGCCAATTGCTGC +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIFPLSC*SMANCC
Trigger: GCAGCAATTGGCCATGCTGCAGCAGCTAAGTGGAAA...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCATTTCCACTTAGCTaGTGCAGCATGGCCAATTGC +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFSFPLS*CSMANC
Trigger: GCAATTGGCCATGCTGCAGCAGCTAAGTGGAAATGA...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTATCATTTCCACTTAGCTaGTGCAGCATGGCCAATTGC +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLSFPLS*CSMANC
Trigger: GCAATTGGCCATGCTGCAGCAGCTAAGTGGAAATGA...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGCTATACAGATAGCCTaGAGCCAGGGAATAGTAAAG +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGAIQIA*SQGIVK
Trigger: CTTTACTATTCCCTGGCTGCAGGCTATCTGTATAGC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCCGGACACTGGCAATGTaGTGCTCCAGGGCTGAGCCG +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPRTLAM*CSRAEP
Trigger: CGGCTCAGCCCTGGAGCAGCACATTGCCAGTGTCCG...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCGCAGGGACTGGAGTGTaGTGCTGCACTGCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPAGTGV*CCTAGA
Trigger: GGCTCCAGCAGTGCAGCAGCACACTCCAGTCCCTGC...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGGGAGCTCCGTCATGCTaGTGCAGGGACAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQGAPSC*CRDSSF
Trigger: GAAGGAGCTGTCCCTGCAGCAGCATGACGGAGCTCC...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGGCTCACAGAGGCAGGTaGTGGGATTGTGGGGACCTG +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQAHRGR*WDCGDL
Trigger: CAGGTCCCCACAATCCCAGCACCTGCCTCTGTGAGC...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCTTCTTCTTGTGGGTCTaGAAATGTGTGTGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTFFLWV*KCVWLG
Trigger: TCCCAGCCACACACATTTGCAGACCCACAAGAAGAA...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCTTCAGATGCTGCTCATaGCACTGCACAGCATTCTCA +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTFRCCS*HCTAFS
Trigger: TGAGAATGCTGTGCAGTGCCATGAGCAGCATCTGAA...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGCAAGGTTCCCATGTGTaGAGGCCTGTGAGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQQGSHV*RPVRRG
Trigger: ACCGCGCCTCACAGGCCTCCACACATGGGAACCTTG...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAGGGCTGCATATGCACTaGCTTCTAATCTTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLGLHMH*LLIFCP
Trigger: AGGACAGAAGATTAGAAGCCAGTGCATATGCAGCCC...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTACTAGCAATGTTCAGCTaGCGTTCAAGGCAGGAAATG +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLLAMFS*RSRQEM
Trigger: CATTTCCTGCCTTGAACGCCAGCTGAACATTGCTAG...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGGCACGTGGGGTTGTTaGTTTCCTCTGCTATCTGTA +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIGTWGC*FPLLSV
Trigger: TACAGATAGCAGAGGAAACCAACAACCCCACGTGCC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGATATATGACACCGTCTTaGCCGCCAAGTCATTCATCT +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGYMTPS*PPSHSS
Trigger: AGATGAATGACTTGGCGGCCAAGACGGTGTCATATA...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCGTAGAGGTACTCATTaGAGGAGCTTCCCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIRRGTH*RSFPSG
Trigger: TCCTGAAGGGAAGCTCCTCCAATGAGTACCTCTACG...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGCTCTTCCTCGGCCGATaGCATGGGCCCCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYALFLGR*HGPPQP
Trigger: TGGCTGTGGGGGCCCATGCCATCGGCCGAGGAAGAG...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCGTGCTGCTGCACTGCTaGAGCCGGTCGCCCGGGTCG +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAVLLHC*SRSPGS
Trigger: CGACCCGGGCGACCGGCTCCAGCAGTGCAGCAGCAC...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGCTTGGAGGGCAGGATTaGGCAGACCCAGCAGGGACT +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQLGGQD*ADPAGT
Trigger: AGTCCCTGCTGGGTCTGCCCAATCCTGCCCTCCAAG...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAGGGTTGCTTTCTTCTTaGGATTTCACGGTACTGTCC +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLGLLSS*DFTVLS
Trigger: GGACAGTACCGTGAAATCCCAAGAAGAAAGCAACCC...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGATCCGGAACTCACCTTaGGCAGGGAGGAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQIRNSP*AGRSSW
Trigger: CCAGGAGCTCCTCCCTGCCCAAGGTGAGTTCCGGAT...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCAGTTTAAAGAGAGGCTaGTCCAGCTGGGAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTSLKRG*SSWEVC
Trigger: ACAGACTTCCCAGCTGGACCAGCCTCTCTTTAAACT...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCGTGTGTGGCAGCCTTTaGACGTGGTGGTGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPVCGSL*TWWCPS
Trigger: CGAGGGGCACCACCACGTCCAAAGGCTGCCACACAC...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCGTGTGGCTTCAGCAGTaGGGGAGGGGCCAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPVWLQQ*GRGQSF
Trigger: GAAGGACTGGCCCCTCCCCCACTGCTGAAGCCACAC...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGACACGTAGGCCAAAGATaGCTAACACTGCATATAAGG +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGHVGQR*LTLHIR
Trigger: CCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTG...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTAGTGTCCTACAGCTTGTGAGTGGCAAGGCCAGAGGCTGCACTCTGAGCTCTCACTGGCTGAGAAGTTaGCAGAGCAAGAACATGTGT +
Preference number: 4 (lower is better)
Translates to: PSVLQLVSGKARGCTLSSHWLRS*QSKNMC
Trigger: ACACATGTTCTTGCTCTGCCAACTTCTCAGCCAGTG...AGAGCTCAGAGTGCAGCCTCTGGCCTTGCCACTCACAAGCTGTAGGACACTAGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442232.1
3UTR CAA 72 bp AGAGAGAGCAGGATGAGGACAGCGTGGGTGACACCTTaGTCTCCTGCTAAAACCCAGCAAGTTTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: RESRMRTAWVTP*SPAKTQQVSVW
Trigger: CCACACTGAAACTTGCTGGGTTTTAGCAGGAGACAAAGGTGTCACCCACGCTGTCCTCATCCTGCTCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGCCAGGGCATCGGCATaGCGTCCAAGGTACTGGAGG +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAARASA*RPRYWR
Trigger: CCTCCAGTACCTTGGACGTCATGCCGATGCCCTGGC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGCCTGCCGATGGTATTTaGCCGCCTGGTCGTACATGC +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQPADGI*PPGRTC
Trigger: GCATGTACGACCAGGCGGTCAAATACCATCGGCAGG...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCTGTTTCAAACAAGGCTaGTGCCCTATAAAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTCFKQG*CPIKLV
Trigger: CACCAGCTTTATAGGGCATCAGCCTTGTTTGAAACA...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGCATGATGGCCTAGGCTaGCGAGCACCCGCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAHDGLG*RAPAAR
Trigger: CCTTGCAGCGGGTGCTCGTCAGCCTAGGCCATCATG...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGCTGGCACAGGCCCTTaGGTAGTGAGACTCCACCCC +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAAGTGP*VVRLHP
Trigger: GGGGTGGAGTCTCACTACTCAAGGGCCTGTGCCAGC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCAGGAGCTGTCAAGGCTaGGGCGCTTGGGTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPRSCQG*GAWVAQ
Trigger: CTGAGCTACCCAAGCGCCTCAGCCTTGACAGCTCCT...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGGGCTCGGGCTGTCTTTaGTGGACATCTCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQGSGCL*WTSLRW
Trigger: CCACCTCAGAGATGTCCATCAAAGACAGCCCGAGCC...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTCATTGTATTTACATCTaGTGGAGTAGCAGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFHCIYI*WSSRGW
Trigger: CCACCCTCTGCTACTCCATCAGATGTAAATACAATG...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCCATTGTATTTACATCTaGTGGAGTAGCAGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTHCIYI*WSSRGW
Trigger: CCACCCTCTGCTACTCCATCAGATGTAAATACAATG...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGACAGGGAACATCTTTaGAGGATCTGGCACAAACAA +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFDREHL*RIWHKQ
Trigger: TTGTTTGTGCCAGATCCTTCAAAGATGTTCCCTGTC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CTCCTTTATTCCCACATTACAGGAACCCTGCAGGGTAAGAAGCCATCCCCATTTGTGTCCTACAGCTTGTaGGTGGCAAGGCCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: LLYSHITGTLQGKKPSPFVSYSL*VARPEA
Trigger: AGCCTCTGGCCTTGCCACTCACAAGCTGTAGGACAC...AAATGGGGATGGCTTCTTACCCTGCAGGGTTCCTGTAATGTGGGAATAAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442232.1
CDS-3UTR GCA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGCTGCATATATCCGGTaGTCTTCTCTGTATTTCCAA +
Preference number: 4 (lower is better)
Translates to: GPAAVIICWSVTGTERAGAAYIR*SSLYFQ
Trigger: TTGGAAATACAGAGAAGAGCACCGGATATATGCAGC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTAAGGTCTTTAGCCAGTaGCAGATCCTGTTCGTAGTA +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFKVFSQ*QILFVV
Trigger: TACTACGAACAGGATCTGGCACTGGCTAAAGACCTT...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGTTGCAGTAGGCTTTTaGTTGGCTCAACTTGTCGTG +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIVAVGF*LAQLVV
Trigger: CACGACAAGTTGAGCCAAGCAAAAGCCTACTGCAAC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGAGCAATCCCCCAGGTTaGCATAGGCCCGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYASNPPG*HRPGPC
Trigger: ACAGGGGCCGGGCCTATGGCAACCTGGGGGATTGCT...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGCACACAAGGGCTTGCTaGAAGCTCCCCATTGCCCTG +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQHTRAC*KLPIAL
Trigger: CAGGGCAATGGGGAGCTTGCAGCAAGCCCTTGTGTG...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTACAAGTCATTCATCTGTaGAGCAATGCTCAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLQVIHL*SNAQVL
Trigger: CAGCACTTGAGCATTGCTGCACAGATGAATGACTTG...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCGCTATACAGATAGCCTaGAGCCAGGGAATAGTAAAG +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTAIQIA*SQGIVK
Trigger: CTTTACTATTCCCTGGCTGCAGGCTATCTGTATAGC...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTAGAACCAGGATGAGCTaGCGGTGCCGGCCCACGGGG +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFRTRMS*RCRPTG
Trigger: CCCCGTGGGCCGGCACCGGCAGCTCATCCTGGTTCT...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGGGTGCGAGAAGGCCTTaGTGCTCTGCACCACCTTCA +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQGARRP*CSAPPS
Trigger: TGAAGGTGGTGCAGAGCAGCAAGGCCTTCTCGCACC...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGGGACTGGAGTGTGCTaGTGCACTGCTGGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAGTGVC*CTAGAG
Trigger: ACCGGCTCCAGCAGTGCAGCAGCACACTCCAGTCCC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGTCCGTCGATTAGCTTaGTTCCCGGTTTTCAGGATT +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIVRRLA*FPVFRI
Trigger: AATCCTGAAAACCGGGAAGCAAGCTAATCGACGGAC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGCGCCAGGCCCCCATCTaGAGGCTGCTCAGAGTCAGT +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYARQAPI*RLLRVS
Trigger: ACTGACTCTGAGCAGCCTGCAGATGGGGGCCTGGCG...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CTCCTTTATTCCCACATTACAGGAACCCTGCAGGGTAAGAAGCCATCCCCATTTGGCAAGGCCAGAGGCTaGACTCTGAGCTCTTCACAC +
Preference number: 4 (lower is better)
Translates to: LLYSHITGTLQGKKPSPFGKARG*TLSSSH
Trigger: GTGTGAAGAGCTCAGAGTGCAGCCTCTGGCCTTGCC...AAATGGGGATGGCTTCTTACCCTGCAGGGTTCCTGTAATGTGGGAATAAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442232.1
CDS-3UTR CCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCCCGGTAATTTCCTTTaGAGAAGAATGCAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIPGNFL*RRMQSP
Trigger: TGGGCTCTGCATTCTTCTCCAAAGGAAATTACCGGG...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGAATTATTCAGAGACTaGGCTAGGGACAGTAGGTAC +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFELFRD*ARDSRY
Trigger: GTACCTACTGTCCCTAGCCCAGTCTCTGAATAATTC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCTAGCAATGTTCAGCTaGCGTTCAAGGCAGGAAATG +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASILAMFS*RSRQEM
Trigger: CATTTCCTGCCTTGAACGCCAGCTGAACATTGCTAG...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAATCTCTTCAAATTGCTaGTCCATGATGTCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLISSNC*SMMSPA
Trigger: AGCGGGAGACATCATGGACCAGCAATTTGAAGAGAT...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGAAGAAGACAGCCGCTaGCAGGCCACTGGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAEEDSR*QATGWG
Trigger: CCCCCAACCAGTGGCCTGCCAGCGGCTGTCTTCTTC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCGCTGCCAGGAACTCGTaGCATCCCGGGAGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAAARNS*HPGSRH
Trigger: GTGGCGGCTCCCGGGATGCCACGAGTTCCTGGCAGC...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGGCAGGTAAGCGTTCTTaGACCGGTCATGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQAGKRS*TGHGPA
Trigger: GGCAGGACCATGACCGGTCCAAGAACGCTTACCTGC...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGTGTGGCTTCAGCAGTaGGGGAGGGGCCAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAVWLQQ*GRGQSF
Trigger: GAAGGACTGGCCCCTCCCCCACTGCTGAAGCCACAC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCCAGGAAGCGGCAGGGTaGTGGGGGTGTTTGCTAGAG +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPQEAAG*WGCLLE
Trigger: CTCTAGCAAACACCCCCACCACCCTGCCGCTTCCTG...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGACCACAGAGGCCCCATaGTGGCCAGCTGTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYATTEAP*WPAVRS
Trigger: ACTCCTGACAGCTGGCCATCATGGGGCCTCTGTGGT...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCATGTGTGGAGGCCTGTaGGGCGCGGTCATTCACTTC +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPMCGGL*GAVIHF
Trigger: GAAGTGAATGACCGCGCCTCACAGGCCTCCACACAT...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGCCAGGGCTTCATCATaGTGGCCTAGGCTGACGAGC +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAARASS*WPRLTS
Trigger: GCTCGTCAGCCTAGGCCATCATGATGAAGCCCTGGC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCCCCGTCCTGGGTCGGTaGCACAGTGTTACTGAACAG +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPPVLGR*HSVTEQ
Trigger: CTGTTCAGTAACACTGTGTCACCGACCCAGGACGGG...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGCTTCCATGGGCGCGATaGGCAGGTCATACAGGGCAC +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYALPWAR*AGHTGH
Trigger: GTGCCCTGTATGACCTGCTCATCGCGCCCATGGAAG...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCTCGCCAGCCTGGAGCTaGACCAGCACCTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRASPAWS*TSTWWS
Trigger: GCTCCACCAGGTGCTGGTTCAGCTCCAGGCTGGCGA...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTTGGCCGCCGCTCCTCTaGAGACGCTCCACCGCAATG +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFWPPLL*RRSTAM
Trigger: CATTGCGGTGGAGCGTCTTCAGAGGAGCGGCGGCCA...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CTCCTTTATTCCCACATTACAGGAACCCTGCAGGGTAAGAAGCCATCCCCATTTCCTGCCTTCACTGGCTaGGAAGTTGGCAGAGCAAGA +
Preference number: 4 (lower is better)
Translates to: LLYSHITGTLQGKKPSPFPAFTG*EVGRAR
Trigger: TCTTGCTCTGCCAACTTCTCAGCCAGTGAAGGCAGG...AAATGGGGATGGCTTCTTACCCTGCAGGGTTCCTGTAATGTGGGAATAAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442232.1
CDS-3UTR GCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGATTGCATCATCCAGTaGCTTGTCATACTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIDCIIQ*LVILLD
Trigger: ATCCAGCAGTATGACAAGGCACTGGATGATGCAATC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397906.6
CDS-3UTR GCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCAAGTCGAGCTTTGATTaGATCATCCAGTGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIKSSFD*IIQCLV
Trigger: GACAAGGCACTGGATGATGCAATCAAAGCTCGACTT...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397906.6
CDS-3UTR GCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCGCTGTCAGGAGTTCCTaGCCAACCACAGACACGACC +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPAVRSS*PTTDTT
Trigger: GGTCGTGTCTGTGGTTGGGCAGGAACTCCTGACAGC...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCGCTGCATATATCCGGTaGTCTTCTCTGTATTTCCAA +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTAAYIR*SSLYFQ
Trigger: TTGGAAATACAGAGAAGAGCACCGGATATATGCAGC...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGGCTCTCTCCAAATCCTaGATGCACCTGGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQALSKS*MHLAAW
Trigger: CCATGCTGCCAGGTGCATGCAGGATTTGGAGAGAGC...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCTTCGTAGTACTTCACTaGCTCCTGATAGTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTFVVLH*LLIVSK
Trigger: CTTGGAAACTATCAGGAGGCAGTGAAGTACTACGAA...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGGTGCCCATGAGCTCTaGACTCCCCTGGCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAGAHEL*TPLASH
Trigger: GTGACTTGCCAGGGGAGTGCAGAGCTCATGGGCACC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGCTGCAAGCTCCCCATTaGCCTGTGTCCATTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQLQAPH*PVSISQ
Trigger: CTGGGAAATGGACACAGGGCAATGGGGAGCTTGCAG...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGAAGCACACAAGGGCTTaGTGCAAGCTCCCCATTGCC +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQKHTRA*CKLPIA
Trigger: GGCAATGGGGAGCTTGCAGCAAGCCCTTGTGTGCTT...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCATCTGTGCAGCAATaGTCAAGTGCTGTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFSSVQQ*SSAVLD
Trigger: ATCAAGAACAGCACTTGAGCATTGCTGCACAGATGA...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCAAGTCATTCATCTGTaGAGCAATGCTCAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIQVIHL*SNAQVL
Trigger: CAGCACTTGAGCATTGCTGCACAGATGAATGACTTG...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCTGTCCGTCCCCTTTCTaGCACAGCCAGGGCTTCATC +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPCPSPF*HSQGFI
Trigger: GATGAAGCCCTGGCTGTGGCAGAAAGGGGACGGACA...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGCACTCTCTGTCTCACTaGTGGCACAGGCCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQHSLSH*WHRPLS
Trigger: ACTCAAGGGCCTGTGCCAGCAGTGAGACAGAGAGTG...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TCCTTTATTCCCACATTACAGGAACCCTGCAGGGTAAGAAGCCATCCCCATTTCCACTCTCTGTCTCACTaGTGGCACAGGCCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: SFIPTLQEPCRVRSHPHFHSLSH*WHRPLS
Trigger: ACTCAAGGGCCTGTGCCAGCAGTGAGACAGAGAGTG...GAAATGGGGATGGCTTCTTACCCTGCAGGGTTCCTGTAATGTGGGAATAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442232.1
CDS-3UTR GCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCCCTTGGTGGCCACACTaGCCACTAGGGGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAPWWPH*PLGAGS
Trigger: GCTGCCAGCCCCTAGTGGGCAGTGTGGCCACCAAGG...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGTCACTGGCATCGTCCTaGACCCGCAAGGACTCAGGG +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYASLASS*TRKDSG
Trigger: CCCTGAGTCCTTGCGGGTGCAGGACGATGCCAGTGA...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCCGCGCACGCTCCGGGTaGTGCAGGATCTCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRARARSG*CRISVR
Trigger: CCTCACAGAGATCCTGCAGCACCCGGAGCGTGCGCG...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTCGCGCACGCTCCGGGTaGTGCAGGATCTCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFRARSG*CRISVR
Trigger: CCTCACAGAGATCCTGCAGCACCCGGAGCGTGCGCG...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGGACTGGAGCGCGAAGTaGACAGTCCGTCGATTAGCT +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQDWSAK*TVRRLA
Trigger: AGCTAATCGACGGACTGTGCACTTCGCGCTCCAGTC...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGGAGCTCCGTCATGCTaGTGCAGGGACAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAGAPSC*CRDSSF
Trigger: GAAGGAGCTGTCCCTGCAGCAGCATGACGGAGCTCC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGCCCCCATCTGCAGGCTaGTCAGAGTCAGTGGGTATA +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQPPSAG*SESVGI
Trigger: TATACCCACTGACTCTGAGCAGCCTGCAGATGGGGG...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCAGTTATGGTAAGACATaGCCTTGTCAAAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTSYGKT*PCQSSS
Trigger: GGAGGAACTTTGACAAGGCCATGTCTTACCATAACT...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGCTCGAAATTTAGCCTaGGAATTATTCAGAGACTGG +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFARNLA*ELFRDW
Trigger: CCAGTCTCTGAATAATTCCCAGGCTAAATTTCGAGC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGCTCAAAGTAGCCAATaGCTTCTTCCATCACATTCA +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFAQSSQ*LLPSHS
Trigger: TGAATGTGATGGAAGAAGCCATTGGCTACTTTGAGC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAGTTCAAGGCAGGAAATaGCTTGTTCGTAATTCCCTA +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLVQGRK*LVRNSL
Trigger: TAGGGAATTACGAACAAGCCATTTCCTGCCTTGAAC...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGCTCGGCCCTGGCACGTaGGGTTGTTGGTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYALGPGT*GCWFPL
Trigger: CAGAGGAAACCAACAACCCCACGTGCCAGGGCCGAG...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTACAGGAACCCTGCAGGGTAAGAAGCCATCCCCATTTCACAGATGACGAGACTTCTCTGTCTCACTGCTaGCACAGGCCCTTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: LQEPCRVRSHPHFTDDETSLSHC*HRPLSS
Trigger: ACTACTCAAGGGCCTGTGCCAGCAGTGAGACAGAGA...AGTCTCGTCATCTGTGAAATGGGGATGGCTTCTTACCCTGCAGGGTTCCTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442232.1
CDS-3UTR CCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCCACGGAGCGGGGGCTTaGCAAACGAGCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAHGAGA*QTSSAS
Trigger: GGAGGCAGAGCTCGTTTGCCAAGCCCCCGCTCCGTG...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGAGGAGCTCTTGCTGCTaGCAGGGTTGCCGTCCATGC +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYARSSCC*QGCRPC
Trigger: GCATGGACGGCAACCCTGCCAGCAGCAAGAGCTCCT...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCATCTCTGTGAGGGCCTaGCCGATGAGTGATGAGGGG +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPISVRA*PMSDEG
Trigger: CCCCTCATCACTCATCGGCCAGGCCCTCACAGAGAT...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCAGAGACAGCAGGGACTaGAGCGCGAAGTGCACAGTC +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPRDSRD*SAKCTV
Trigger: GACTGTGCACTTCGCGCTCCAGTCCCTGCTGTCTCT...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGCCAAGGGCAGGGCGTTaGAAACAGACTGAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQPRAGR*KQTEQK
Trigger: CTTCTGCTCAGTCTGTTTCCAACGCCCTGCCCTTGG...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGTTTCTGTGCTAGACTaGTCTGATTCTCCTGTATCT +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFVSVLD*SDSPVS
Trigger: AGATACAGGAGAATCAGACCAGTCTAGCACAGAAAC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCAGAGGCTGGTCCAGCTaGGAAGTCTGTGAGTCGCAG +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPRGWSS*EVCESQ
Trigger: CTGCGACTCACAGACTTCCCAGCTGGACCAGCCTCT...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTGGGTGCTGGTGGCTGTaGGGGGACTGCACTCAGGGA +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFGCWWL*GDCTQG
Trigger: TCCCTGAGTGCAGTCCCCCCACAGCCACCAGCACCC...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGAAGCGGCAGGGTGGTaGGGGTGTTTGCTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAEAAGW*GCLLER
Trigger: CCTCTCTAGCAAACACCCCCACCACCCTGCCGCTTC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGTGGACTCCTCCCAAGTaGGACAAAGAGCCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQWTPPK*DKEPRA
Trigger: AGCCCTTGGCTCTTTGTCCCACTTGGGAGGAGTCCA...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGCCTGCCGATGGTATTTaGCCGCCTGGTCGTACATGC +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAPADGI*PPGRTC
Trigger: GCATGTACGACCAGGCGGTCAAATACCATCGGCAGG...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGTCCAAGGCTACTATATaGCACCGTCTTGGCCGCCAA +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQSKATI*HRLGRQ
Trigger: TTGGCGGCCAAGACGGTGTCATATAGTAGCCTTGGA...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGCAAGGCCTGGTAGGATaGTGTCTGCAGGTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQQGLVG*CLQVKE
Trigger: CTCTTTGACCTGCAGACATCATCCTACCAGGCCTTG...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGCCCGTCCTGGGTCGGTaGCACAGTGTTACTGAACAG +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAPVLGR*HSVTEQ
Trigger: CTGTTCAGTAACACTGTGTCACCGACCCAGGACGGG...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCGCTTGGGGTTGCCGATaGCAGCCGCCATGGATGTGG +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAAWGCR*QPPWMW
Trigger: CCACATCCATGGCGGCTGTCATCGGCAACCCCAAGC...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGTCCACCGCAATGAGATaGCTCTGTGTCTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQSTAMR*LCVSSR
Trigger: TCTGGAGGAGACACAGAGTCATCTCATTGCGGTGGA...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGGAACGCACTGGTTTCTaGCGCTCTGAAGACAGCAGT +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQERTGF*RSEDSS
Trigger: ACTGCTGTCTTCAGAGCGTCAGAAACCAGTGCGTTC...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGAGGGACCGGCTGCAGTaGTCATATGCTGGAGCGTCA +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYARDRLQ*SYAGAS
Trigger: TGACGCTCCAGCATATGATCACTGCAGCCGGTCCCT...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTATTTTCCAGCCTGAACTaGAATTATCAAGGCTACAGT +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLFSSLN*NYQGYS
Trigger: ACTGTAGCCTTGATAATTTCAGTTCAGGCTGGAAAA...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTATTGCTGTATAAGATaGAGTTCTGAGGGTCAACAG +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFYCCIR*SSEGQQ
Trigger: CTGTTGACCCTCAGAACTGCATCTTATACAGCAATA...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397906.6
CDS-3UTR GCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTCTTGTGGAGTTTCAGTaGAGTGTCATAATCACCTTT +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFLVEFQ*SVIITF
Trigger: AAAGGTGATTATGACACTGCACTGAAACTCCACAAG...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCTCAGCTCCTGGGCAATaGACAGGTGGGTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPSAPGQ*TGGSCG
Trigger: TCCACAAGACCCACCTGTGCATTGCCCAGGAGCTGA...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGGTCCGTGCTCAGCTGTaGCTCATGTCGGATTGTTTC +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQVRAQL*LMSDCF
Trigger: GAAACAATCCGACATGAGGCACAGCTGAGCACGGAC...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGGAAGGGTTACACTGCTaGTGGCCTGGAAGTCACTTG +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQEGLHC*WPGSHL
Trigger: CAAGTGACTTCCAGGCCAGCAGCAGTGTAACCCTTC...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTACTGGAGTGTGCTGCTaGACTGCTGGAGCCGGTCGC +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFTGVCC*TAGAGR
Trigger: GCGACCGGCTCCAGCAGTGCAGCAGCACACTCCAGT...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTTGGCATCTGAGGCGATaGTGTCCGCACCGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFWHLRR*CPHRWE
Trigger: CTCCCACCGGTGCGGACAGCATCGCCTCAGATGCCA...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCTGGCATCTGAGGCGATaGTGTCCGCACCGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAWHLRR*CPHRWE
Trigger: CTCCCACCGGTGCGGACAGCATCGCCTCAGATGCCA...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCCCCCCATCTGCAGGCTaGTCAGAGTCAGTGGGTATA +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPPPSAG*SESVGI
Trigger: TATACCCACTGACTCTGAGCAGCCTGCAGATGGGGG...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
50% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp GGCTCCTTTATTCCCACATTACAGGAACCCTGCAGGGTAAGAAGCCATCCCCATCTCCGCAAACCTGGTTaGATCCCTGTTAAACAGGTT +
Preference number: 4 (lower is better)
Translates to: GSFIPTLQEPCRVRSHPHLRKPG*IPVKQV
Trigger: AACCTGTTTAACAGGGATGCAACCAGGTTTGCGGAG...ATGGGGATGGCTTCTTACCCTGCAGGGTTCCTGTAATGTGGGAATAAAGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442232.1
CDS-3UTR CCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCTGGGGTAGTCTCCAATaGCTGTGTACACGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPWGSLQ*LCTRGP
Trigger: TGGGCCACGTGTACACAGCCATTGGAGACTACCCCA...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCCATCTTTGGATTGCTTaGCAAGAAGAACACACTGTT +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTHLWIA*QEEHTV
Trigger: AACAGTGTGTTCTTCTTGCCAAGCAATCCAAAGATG...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCAATCCTGCATGCACCTaGCAGCATGGCCTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPNPACT*QHGLVQ
Trigger: CTGGACTAGGCCATGCTGCCAGGTGCATGCAGGATT...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGTGCAGCTCCTGCCGATaGTATTTGACCGCCTGGTCG +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYACSSCR*YLTAWS
Trigger: CGACCAGGCGGTCAAATACCATCGGCAGGAGCTGCA...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGTTCAAGGCAGGAAATaGCTTGTTCGTAATTCCCTA +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIVQGRK*LVRNSL
Trigger: TAGGGAATTACGAACAAGCCATTTCCTGCCTTGAAC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCCCATGGATGTGGAGCTaGAGTATGTGGGCGGGTTCT +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPPWMWS*SMWAGS
Trigger: AGAACCCGCCCACATACTCCAGCTCCACATCCATGG...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCCCAAGGGCAGGGCGTTaGAAACAGACTGAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPPRAGR*KQTEQK
Trigger: CTTCTGCTCAGTCTGTTTCCAACGCCCTGCCCTTGG...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGTTTCTGTGCTAGACTaGTCTGATTCTCCTGTATCT +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIVSVLD*SDSPVS
Trigger: AGATACAGGAGAATCAGACCAGTCTAGCACAGAAAC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCAGACATGCTTATTGTTaGCTTTTGTCAACATGGCTG +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTRHAYC*LLSTWL
Trigger: CAGCCATGTTGACAAAAGCCAACAATAAGCATGTCT...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGTTGCTTCCATCCACGTaGCCCTCACATACCCTGGGC +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYALLPST*PSHTLG
Trigger: GCCCAGGGTATGTGAGGGCCACGTGGATGGAAGCAA...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TCCTTTATTCCCACATTACAGGAACCCTGCAGGGTAAGAAGCCATCCCCATTTCCAAATTGCTGGTCCATaGTGTCTCCCGCTTCACTCT +
Preference number: 4 (lower is better)
Translates to: SFIPTLQEPCRVRSHPHFQIAGP*CLPLHS
Trigger: AGAGTGAAGCGGGAGACATCATGGACCAGCAATTTG...GAAATGGGGATGGCTTCTTACCCTGCAGGGTTCCTGTAATGTGGGAATAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442232.1
CDS-3UTR TCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGGTGACACAGTGTTACTaGACAGGCTCGTCATGCTCT +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQVTQCY*TGSSCS
Trigger: AGAGCATGACGAGCCTGTTCAGTAACACTGTGTCAC...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTGGAGGGCGAAAGGAATaGGGTAGAGCTCCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFGGRKE*GRAPPP
Trigger: TGGAGGGGGAGCTCTACCTCATTCCTTTCGCCCTCC...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTCACAGAGATGGCATCTaGGGCGATGCTGTCCGCACC +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFHRDGI*GDAVRT
Trigger: GGTGCGGACAGCATCGCCTCAGATGCCATCTCTGTG...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGACGCTCCACCGCAATaGGATGACTCTGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYADAPPQ*DDSVSP
Trigger: AGGAGACACAGAGTCATCTCATTGCGGTGGAGCGTC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTACCTGTAGAATTCAACTaGAATTTCATATATCCCACC +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLPVEFN*NFIYPT
Trigger: GGTGGGATATATGAAATTTCAGTTGAATTCTACAGG...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCAGCGCTGTTTCAATGTaGATTATTGCATTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASISAVSM*IIALLL
Trigger: CAGCAACAATGCAATAATTCACATTGAAACAGCGCT...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCAAAAAGGCCAGGTATTaGATATTTTATGTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTKKARY*IFYVVW
Trigger: CCACACCACATAAAATATTCAATACCTGGCCTTTTT...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTTGTTGCCTACTTACTaGAAGCAAACCAGATTATTG +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFLLPTY*KQTRLL
Trigger: CAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAA...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTATTGTTGCCTACTTACTaGAAGCAAACCAGATTATTG +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLLLPTY*KQTRLL
Trigger: CAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAA...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCAGTTCATCTTTGGATTaGTTGGCAAGAAGAACACAC +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASISSSLD*LARRTH
Trigger: GTGTGTTCTTCTTGCCAAGCAATCCAAAGATGAACT...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCTCAAGCTGGTGGTACTaGAGGGCTGTGTCATACTCC +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPSSWWY*RAVSYS
Trigger: GGAGTATGACACAGCCCTGCAGTACCACCAGCTTGA...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGGCCATGGCGAATTTTTaGCTCATCTTCTCTTCGGCC +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQAMANF*LIFSSA
Trigger: GGCCGAAGAGAAGATGAGGCAAAAATTCGCCATGGC...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGCAGAAGATCAGCAAATaGCCTTGTCCGTCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQQKISK*PCPSPF
Trigger: GAAAGGGGACGGACAAGGGCATTTGCTGATCTTCTG...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCCGAAGGAGCTCTTGCTaGTGGCAGGGTTGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRARRSSC*WQGCRP
Trigger: TGGACGGCAACCCTGCCAGCAGCAAGAGCTCCTTCG...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCGCGGGCAGTCCGAGATaGTCTCCCCATCACTGGCAT +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAAGSPR*SPHHWH
Trigger: ATGCCAGTGATGGGGAGAGCATCTCGGACTGCCCGC...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCGATTTCTCCACCAGGTaGAGCAGCACTCGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRADFSTR*SSTRRA
Trigger: CGCCCTGCGAGTGCTGCTGCACCTGGTGGAGAAATC...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTGCTGATGCCAAGTCCTaGTCCTTCTCGCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFADAKS*SFSPAW
Trigger: CCAGGCTGGCGAGAAGGAGCAGGACTTGGCATCAGC...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGACTGGAGCGCGAAGTaGACAGTCCGTCGATTAGCT +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYADWSAK*TVRRLA
Trigger: AGCTAATCGACGGACTGTGCACTTCGCGCTCCAGTC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGCACACTGTTTGTGACTaGCCAGTGCATTGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQHTVCD*PVHWGS
Trigger: ACTACCCCAATGCACTGGCCAGTCACAAACAGTGTG...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGAATCCTGCATGCACCTaGCAGCATGGCCTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYANPACT*QHGLVQ
Trigger: CTGGACTAGGCCATGCTGCCAGGTGCATGCAGGATT...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGATCTGTAGATCAAGCTaGTGGTACTGCAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQICRSS*WYCRAV
Trigger: CACAGCCCTGCAGTACCACCAGCTTGATCTACAGAT...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGGGCACGTGGGGTTGTTaGTTTCCTCTGCTATCTGTA +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQGTWGC*FPLLSV
Trigger: TACAGATAGCAGAGGAAACCAACAACCCCACGTGCC...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCCTGATCAATAGTGACTaGGGAGTAGGGGTCGGAGTC +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPLINSD*GVGVGV
Trigger: GACTCCGACCCCTACTCCCCAGTCACTATTGATCAG...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCTGGAGCTGGAGTATGTaGGCGGGTTCTTCCGTAAGT +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPWSWSM*AGSSVS
Trigger: ACTTACGGAAGAACCCGCCCACATACTCCAGCTCCA...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTCAGCCGCCATGGATGTaGAGCTGGAGTATGTGGGCG +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFQPPWM*SWSMWA
Trigger: CGCCCACATACTCCAGCTCCACATCCATGGCGGCTG...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGATGTGGGTGGCAAAGTaGACGCATTCAGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAMWVAK*THSAWV
Trigger: GACCCAGGCTGAATGCGTCCACTTTGCCACCCACAT...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGATCCACCCTCGGGTTTaGAGACAAAGCTCATTGAGG +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQIHPRV*RQSSLR
Trigger: CCTCAATGAGCTTTGTCTCCAAACCCGAGGGTGGAT...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGCCCCACAGAAGTCCTaGCTTTTGGTGAATGTGGCC +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAAPQKS*LLVNVA
Trigger: GGCCACATTCACCAAAAGCCAGGACTTCTGTGGGGC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCAGACATGCTTATTGTTaGCTTTTGTCAACATGGCTG +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIRHAYC*LLSTWL
Trigger: CAGCCATGTTGACAAAAGCCAACAATAAGCATGTCT...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGTGGACTCCTCCCAAGTaGGACAAAGAGCCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAWTPPK*DKEPRA
Trigger: AGCCCTTGGCTCTTTGTCCCACTTGGGAGGAGTCCA...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
3UTR CAA 72 bp TTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATaGTCAGTGTATGCGCAGAAGCTGAGATCCCACCCA +
Preference number: 4 (lower is better)
Translates to: FFSEEYTEEQVR*SVYAQKLRSHP
Trigger: TGGGTGGGATCTCAGCTTCTGCGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTTCTCCTTCCATGTCTTaGAGGTCGGGAGCAAGCCGG +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFSPSMS*RSGASR
Trigger: CCGGCTTGCTCCCGACCTTCAAGACATGGAAGGAGA...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGCGTTGGAAACAGACTaGGCAGAAGCAAGAGACTCG +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAALETD*AEARDS
Trigger: CGAGTCTCTTGCTTCTGCTCAGTCTGTTTCCAACGC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCGGCTCGGGCTGTCTTTaGTGGACATCTCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAGSGCL*WTSLRW
Trigger: CCACCTCAGAGATGTCCATCAAAGACAGCCCGAGCC...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCACACTGAGGAACAGGTaGGATTGTCAGTGTATGCGC +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPTLRNR*DCQCMR
Trigger: GCGCATACACTGACAATCTCACCTGTTCCTCAGTGT...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGCAGTGGGAAGGTGTCTaGGGAGGGGCAGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMQWEGV*GGAGPQ
Trigger: CTGTGGCCCTGCCCCTCCTCAGACACCTTCCCACTG...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCACCCTGTCGGAAGTATaGCTTTGGCCACTTGGGATT +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPTLSEV*LWPLGI
Trigger: AATCCCAAGTGGCCAAAGGCATACTTCCGACAGGGT...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397906.6
CDS-3UTR GCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTAGGCACTGCCCAGGTTaGTATAAGCCCGGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFRHCPG*YKPGPL
Trigger: AAGAGGCCCGGGCTTATAGCAACCTGGGCAGTGCCT...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGCTGGATCATTCGGTATaGAGTGCCCAGGGCTGCATA +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYALDHSV*SAQGCI
Trigger: TATGCAGCCCTGGGCACTGCATACCGAATGATCCAG...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCTTCCCTAATTGGCTGTaGAGACTTCCCAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPFPNWL*RLPSSP
Trigger: TGGAGAGCTGGGAAGTCTGCACAGCCAATTAGGGAA...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTAAGGCCTTGCTGCTCTaGACCACCTTCATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFKALLL*TTFMAS
Trigger: GGAGGCCATGAAGGTGGTGCAGAGCAGCAAGGCCTT...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCGCGAGAAGGCCTTGCTaGTCTGCACCACCTTCATGG +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAARRPC*SAPPSW
Trigger: CCATGAAGGTGGTGCAGAGCAGCAAGGCCTTCTCGC...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTGATGAGCATGAACCCTaGCCAGTTGGAGGGGTGCGA +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFDEHEP*PVGGVR
Trigger: TCGCACCCCTCCAACTGGGCAGGGTTCATGCTCATC...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGTTGTTCTCCACACTCTaGTGGGATGTGTACATGGCA +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQLFSTL*WDVYMA
Trigger: TGCCATGTACACATCCCAGCAGAGTGTGGAGAACAA...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTCAGGGTTATTACTCTTaGTCACCTGGCCGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFQGYYS*SPGRRS
Trigger: GGAGCGGCGGCCAGGTGAGCAAGAGTAATAACCCTG...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGCCAGGAGGAAGAGGTTaGAGTGAGCCAAAATCGCAC +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAPGGRG*SEPKSH
Trigger: GTGCGATTTTGGCTCACTGCAACCTCTTCCTCCTGG...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAACAGTTTTCACTTGTTaGCTACTTACTGAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLTVFTC*LLTESK
Trigger: TTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGT...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGTCGGAAGTATGCCTTTaGCCACTTGGGATTGAGAAG +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQSEVCL*PLGIEK
Trigger: CTTCTCAATCCCAAGTGGCCAAAGGCATACTTCCGA...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397906.6
CDS-3UTR CCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGCCCGGTAATTTCCTTTaGAGAAGAATGCAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQPGNFL*RRMQSP
Trigger: TGGGCTCTGCATTCTTCTCCAAAGGAAATTACCGGG...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGTTCAGATGCTGCTCATaGCACTGCACAGCATTCTCA +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQFRCCS*HCTAFS
Trigger: TGAGAATGCTGTGCAGTGCCATGAGCAGCATCTGAA...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCTGGGCAATGCACAGGTaGGTCTTGTGGAGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPWAMHR*VLWSFS
Trigger: ACTGAAACTCCACAAGACCCACCTGTGCATTGCCCA...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGGTCATTCACTTCCATaGAGATCTGCAGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAGHSLP*RSAAPA
Trigger: GGCAGGAGCTGCAGATCTCCATGGAAGTGAATGACC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTGGCCCCGGTAAGCCTTaGCTTGGTCTTGCATGCGAT +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFGPGKP*LGLACD
Trigger: ATCGCATGCAAGACCAAGCCAAGGCTTACCGGGGCC...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGAGCACTAGTCCCCTCTaGCCATTTACCATCTCTAAG +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQSTSPL*PFTISK
Trigger: CTTAGAGATGGTAAATGGCCAGAGGGGACTAGTGCT...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGTGGAGCTGGAGTATGTaGGCGGGTTCTTCCGTAAGT +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAWSWSM*AGSSVS
Trigger: ACTTACGGAAGAACCCGCCCACATACTCCAGCTCCA...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGCTGGGATGTGTACATaGCATTGCGCTGCCCATTCT +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAAGMCT*HCAAHS
Trigger: AGAATGGGCAGCGCAATGCCATGTACACATCCCAGC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCAGAGACAGCAGGGACTaGAGCGCGAAGTGCACAGTC +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRARDSRD*SAKCTV
Trigger: GACTGTGCACTTCGCGCTCCAGTCCCTGCTGTCTCT...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTGCAGGTAAGCGTTCTTaGACCGGTCATGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFAGKRS*TGHGPA
Trigger: GGCAGGACCATGACCGGTCCAAGAACGCTTACCTGC...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTAGCCACCAGTGTGTGTaGCAGCCTTTGGACGTGGTG +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFSHQCV*QPLDVV
Trigger: CACCACGTCCAAAGGCTGCCACACACACTGGTGGCT...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGGGATCCTTGGCACTTaGGAAAGAAGGAGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAGILGT*ERRRLR
Trigger: TCTCAGCCTCCTTCTTTCCCAAGTGCCAAGGATCCC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCAACCACATAAACCATTaGCTCTTCAGTATGAAACCT +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASINHINH*LFSMKP
Trigger: AGGTTTCATACTGAAGAGCCAATGGTTTATGTGGTT...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTATTGAATATTTTATGTaGTGTGGGCCAAAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFIEYFM*CGPKAK
Trigger: TTTTGCCTTTGGCCCACACCACATAAAATATTCAAT...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGCAGTGCACTCTATCCTaGGTGACAGAGCGAGACTCT +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAQCTLS*VTERDS
Trigger: AGAGTCTCGCTCTGTCACCCAGGATAGAGTGCACTG...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGCAGTGATCATATGCTaGAGCGTCACTGGGACAGAG +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAAVIIC*SVTGTE
Trigger: CTCTGTCCCAGTGACGCTCCAGCATATGATCACTGC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGTTTAACAGTGACTGGTaGTGGCTGACTCTTCTGATG +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQFNSDW*WLTLLM
Trigger: CATCAGAAGAGTCAGCCATCACCAGTCACTGTTAAA...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCCAAGAACACCAAGACTaGCATACACGTAAAGTGGCG +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPQEHQD*HTRKVA
Trigger: CGCCACTTTACGTGTATGTCAGTCTTGGTGTTCTTG...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGCAACAAATTCAGCTTTaGTCAGTACCGGTCCATCAG +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQQQIQL*SVPVHQ
Trigger: CTGATGGACCGGTACTGAGCAAAGCTGAATTTGTTG...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397906.6
CDS-3UTR GCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCTTGAGCCAGTCCAGATaGAAAGGCTGCCAGGGCATC +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRALSQSR*KGCQGI
Trigger: GATGCCCTGGCAGCCTTTGCATCTGGACTGGCTCAA...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCACACGTGGCCCAGACTaGTCAAGGCTGATGAAGCTG +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRATRGPD*SRLMKL
Trigger: CAGCTTCATCAGCCTTGAGCAGTCTGGGCCACGTGT...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCTCAGCTCCTGGGCAATaGACAGGTGGGTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRASAPGQ*TGGSCG
Trigger: TCCACAAGACCCACCTGTGCATTGCCCAGGAGCTGA...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGAGCAATCCCCCAGGTTaGCATAGGCCCGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMSNPPG*HRPGPC
Trigger: ACAGGGGCCGGGCCTATGGCAACCTGGGGGATTGCT...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCAAGCACACAAGGGCTTaGTGCAAGCTCCCCATTGCC +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAKHTRA*CKLPIA
Trigger: GGCAATGGGGAGCTTGCAGCAAGCCCTTGTGTGCTT...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCGTCCGTCGATTAGCTTaGTTCCCGGTTTTCAGGATT +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPVRRLA*FPVFRI
Trigger: AATCCTGAAAACCGGGAAGCAAGCTAATCGACGGAC...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGTGGAATGCTGGGGTGTaGTCTGCCAGAACATCTTCA +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAWNAGV*SARTSS
Trigger: TGAAGATGTTCTGGCAGAGCACACCCCAGCATTCCA...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGCCTGTGGGTCATAGTTaGCAACCCCTGATCTACACA +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAPVGHS*QPLIYT
Trigger: TGTGTAGATCAGGGGTTGGCAACTATGACCCACAGG...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCACTTTCATTTTGTGTTaGACATCAGTGTGGATCAAA +
Preference number: 4 (lower is better)
Translates to: PPKWDKEPRAMQEAFASITFILC*TSVWIK
Trigger: TTTGATCCACACTGATGTGCAACACAAAATGAAAGT...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGCCATCAGGACTTCTCTaGCCAATAGTGTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAPSGLL*PIVSAP
Trigger: TGGTGCTGACACTATTGGCCAGAGAAGTCCTGATGG...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397906.6
CDS-3UTR CCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGGCCTTGTCATACTTCTaGATCATTCGGTATGCAGTG +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQALSYF*IIRYAV
Trigger: CACTGCATACCGAATGATCCAGAAGTATGACAAGGC...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGTATATGACACCGTCTTaGCCGCCAAGTCATTCATCT +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQYMTPS*PPSHSS
Trigger: AGATGAATGACTTGGCGGCCAAGACGGTGTCATATA...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGTCCTCCAGAATTTTCTaGGCTAACTCTTGTGGATCC +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQSSRIF*ANSCGS
Trigger: GGATCCACAAGAGTTAGCCCAGAAAATTCTGGAGGA...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTCCGGAAGATCTTCATTaGCCCTGTGGAATGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFPEDLH*PCGMLG
Trigger: CCCCAGCATTCCACAGGGCCAATGAAGATCTTCCGG...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGAGCCTTTGGACGTGGTaGTGCCCCTCGCCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMSLWTW*CPSPAE
Trigger: CTCTGCAGGCGAGGGGCACCACCACGTCCAAAGGCT...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTATGCTGGAGCGTCACTaGGACAGAGAGAGCAGGATG +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFMLERH*DRESRM
Trigger: CATCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCAT...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCGCAAATGTGTGTGGCTaGGAGGTGGCAGAATCGGCA +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAANVCG*EVAESA
Trigger: TGCCGATTCTGCCACCTCCCAGCCACACACATTTGC...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCGACAGTAGGTACTTCTaGCACTCTTCAGCTTTACTG +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPDSRYF*HSSALL
Trigger: CAGTAAAGCTGAAGAGTGTCAGAAGTACCTACTGTC...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGAAGTCACTCAGCTCCTaGTATACCTCCAGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAKSLSS*YTSSSC
Trigger: ACAGGAACTGGAGGTATATCAGGAGCTGAGTGACTT...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGCTTCCATGGGCGCGATaGGCAGGTCATACAGGGCAC +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMLPWAR*AGHTGH
Trigger: GTGCCCTGTATGACCTGCTCATCGCGCCCATGGAAG...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTAGTCCTGGCTTTTGGTaGATGTGGCCCAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFSPGFW*MWPRKA
Trigger: GGCTTTTCTGGGCCACATTCACCAAAAGCCAGGACT...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGGGCATTTTTCCAGCCTaGACTGAAATTATCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQGIFPA*TEIIKA
Trigger: AGCCTTGATAATTTCAGTTCAGGCTGGAAAAATGCC...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTGGTAGTGATAGGCACTaGCCAGGTTGCTATAAGCCC +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFGSDRH*PGCYKP
Trigger: GGGCTTATAGCAACCTGGGCAGTGCCTATCACTACC...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGGGTGCCCATGAGCTCTaGACTCCCCTGGCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMGAHEL*TPLASH
Trigger: GTGACTTGCCAGGGGAGTGCAGAGCTCATGGGCACC...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTTGGCTTGGTCTTGCATaGGATTCAGACTCTGCGCGA +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFWLGLA*DSDSAR
Trigger: TCGCGCAGAGTCTGAATCGCATGCAAGACCAAGCCA...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCTTGGAAGGGTTACACTaGTGCTGGCCTGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRALEGLH*CWPGSH
Trigger: GTGACTTCCAGGCCAGCAGCAGTGTAACCCTTCCAA...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTTTGGAAGGGTTACACTaGTGCTGGCCTGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFLEGLH*CWPGSH
Trigger: GTGACTTCCAGGCCAGCAGCAGTGTAACCCTTCCAA...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGGCGGGCAGTCCGAGATaGTCTCCCCATCACTGGCAT +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMAGSPR*SPHHWH
Trigger: ATGCCAGTGATGGGGAGAGCATCTCGGACTGCCCGC...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGTTGTTCTCCACACTCTaGTGGGATGTGTACATGGCA +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYALFSTL*WDVYMA
Trigger: TGCCATGTACACATCCCAGCAGAGTGTGGAGAACAA...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCAGGTTATGGACAGCCTaGACCTTTTCATCAATGGCT +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPRLWTA*TFSSMA
Trigger: AGCCATTGATGAAAAGGTGCAGGCTGTCCATAACCT...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGAGCAAAAGGCCCTGTTaGTTAGGATCTGTACGTGTG +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYASKRPC*LGSVRV
Trigger: CACACGTACAGATCCTAAGCAACAGGGCCTTTTGCT...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTGAAGCTGCTGATAAGTaGGCTCGAGGGAGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFEAADK*ARGSLS
Trigger: TGAGAGACTCCCTCGAGCCCACTTATCAGCAGCTTC...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCGAATTATTCAGAGACTaGGCTAGGGACAGTAGGTAC +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPELFRD*ARDSRY
Trigger: GTACCTACTGTCCCTAGCCCAGTCTCTGAATAATTC...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTTATTCCCACATTACAGGAACCCTGCAGGGTAAGAAGCCATCCCCATTTCACAATCTCTTCAAATTGCTaGTCCATGATGTCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: FIPTLQEPCRVRSHPHFTISSNC*SMMSPA
Trigger: AGCGGGAGACATCATGGACCAGCAATTTGAAGAGAT...TGTGAAATGGGGATGGCTTCTTACCCTGCAGGGTTCCTGTAATGTGGGAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442232.1
CDS-3UTR CCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTTCCAGGAGATGTGGGTaGCAAAGTGGACGCATTCAG +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFSRRCG*QSGRIQ
Trigger: CTGAATGCGTCCACTTTGCCACCCACATCTCCTGGA...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTAGTTTGCAAAGGGCTTaGAGGGCAGGATTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFSLQRA*RAGLGR
Trigger: TCTGCCCAATCCTGCCCTCCAAGCCCTTTGCAAACT...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCAAGGGAACAGGAGCCTaGAAGGCGGGATTCTGGTTA +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAKGTGA*KAGFWL
Trigger: TAACCAGAATCCCGCCTTCCAGGCTCCTGTTCCCTT...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCCACGTAGGCCAAAGATaGCTAACACTGCATATAAGG +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPHVGQR*LTLHIR
Trigger: CCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTG...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCTCATGTTCATCTTTGTaGTGCCCATGTTGCCATAGA +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPSCSSL*CPCCHR
Trigger: TCTATGGCAACATGGGCATCACAAAGATGAACATGA...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCCTTCCTGTAAGTACATaGCTGCTTGGGAATAGTTCT +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPLPVST*LLGNSS
Trigger: AGAACTATTCCCAAGCAGTCATGTACTTACAGGAAG...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGTGTTTCAAACAAGGCTaGTGCCCTATAAAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYACFKQG*CPIKLV
Trigger: CACCAGCTTTATAGGGCATCAGCCTTGTTTGAAACA...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCCAAATTGCTGGTCCATaGTGTCTCCCGCTTCACTCT +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAQIAGP*CLPLHS
Trigger: AGAGTGAAGCGGGAGACATCATGGACCAGCAATTTG...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCGTGACACAGTGTTACTaGACAGGCTCGTCATGCTCT +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAVTQCY*TGSSCS
Trigger: AGAGCATGACGAGCCTGTTCAGTAACACTGTGTCAC...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGAAATTCAAGTTTGGTTaGCAGCGGGACCCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAKFKFG*QRDPKD
Trigger: GTCTTTTGGGTCCCGCTGTCAACCAAACTTGAATTT...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGACAGGGAACATCTTTaGAGGATCTGGCACAAACAA +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYADREHL*RIWHKQ
Trigger: TTGTTTGTGCCAGATCCTTCAAAGATGTTCCCTGTC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTGCTACATCCAAGTCCTaGTGCATATATCCGGTGCTC +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFATSKS*CIYPVL
Trigger: GAGCACCGGATATATGCAGCAGGACTTGGATGTAGC...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTCTCCATCAACTCCTGTaGCAGCTCCAGGACATAGTT +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFLHQLL*QLQDIV
Trigger: AACTATGTCCTGGAGCTGGCACAGGAGTTGATGGAG...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGATGCGATTCAGACTCTaGGCGACAGATAAATATTGT +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQMRFRL*ATDKYC
Trigger: ACAATATTTATCTGTCGCGCAGAGTCTGAATCGCAT...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCAGAGTTTGTAGTCCGTaGTCAGCTGTGCCTCATGTC +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRARVCSP*SAVPHV
Trigger: GACATGAGGCACAGCTGAGCACGGACTACAAACTCT...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCTGCTGGGGTGTGCTCTaGCAGAACATCTTCAGGTTA +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRACWGVL*QNIFRL
Trigger: TAACCTGAAGATGTTCTGGCAGAGCACACCCCAGCA...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCTCCTCCTTCTTATTGTaGCGTGGTGACAAATTCAAC +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPSSFLL*RGDKFN
Trigger: GTTGAATTTGTCACCACGGCACAATAAGAAGGAGGA...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCATGATTCCCTTGTCTTaGCTCAAGCTGGCAACAATT +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPMIPLS*LKLATI
Trigger: AATTGTTGCCAGCTTGAGGCAAGACAAGGGAATCAT...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTAAGAGCCAAGGGCTATaGAGGAGGCATTTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFKSQGL*RRHLLP
Trigger: TGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTT...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCGGTCACCTAAGGTCTTaGCTACATCCAAGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAGHLRS*LHPSPA
Trigger: AGCAGGACTTGGATGTAGCCAAGACCTTAGGTGACC...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCAGTTATGGTAAGACATaGCCTTGTCAAAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPSYGKT*PCQSSS
Trigger: GGAGGAACTTTGACAAGGCCATGTCTTACCATAACT...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTTGTAGATCAAGCTGGTaGTACTGCAGGGCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFCRSSW*YCRAVS
Trigger: TGACACAGCCCTGCAGTACCACCAGCTTGATCTACA...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTCGTAGAGGTACTCATTaGAGGAGCTTCCCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFRRGTH*RSFPSG
Trigger: TCCTGAAGGGAAGCTCCTCCAATGAGTACCTCTACG...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGATCTCTGTGAGGGCCTaGCCGATGAGTGATGAGGGG +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMISVRA*PMSDEG
Trigger: CCCCTCATCACTCATCGGCCAGGCCCTCACAGAGAT...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGCCGGCTGTCCCAGGTTaGGGTTGTTTGTGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMPAVPG*GCLWSG
Trigger: ACCAGACCACAAACAACCCCAACCTGGGACAGCCGG...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTTTTGGAAGGGTGAGTTaGGGCTGGGAATCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFFGRVS*GWESES
Trigger: TGACTCTGATTCCCAGCCCCAACTCACCCTTCCAAA...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGTCCTCCAGAATTTTCTaGGCTAACTCTTGTGGATCC +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYASSRIF*ANSCGS
Trigger: GGATCCACAAGAGTTAGCCCAGAAAATTCTGGAGGA...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGAAGAAAATTCAAGTTTaGTTGACAGCGGGACCCAAA +
Preference number: 4 (lower is better)
Translates to: SPRRPKMANTAYKERECQKKIQV*LTAGPK
Trigger: TTTGGGTCCCGCTGTCAACCAAACTTGAATTTTCTT...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGACAAATTCAACAGACTaGGGACATCCCTTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYATNSTD*GHPFWK
Trigger: CTTCCAAAAGGGATGTCCTCAGTCTGTTGAATTTGT...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTTTCAGAGGAGTACACTaGGGAACAGGTGAGATTGTC +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFFRGVH*GTGEIV
Trigger: GACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAA...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTCAAGAACACCAAGACTaGCATACACGTAAAGTGGCG +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFQEHQD*HTRKVA
Trigger: CGCCACTTTACGTGTATGTCAGTCTTGGTGTTCTTG...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGGCATTTTTCCAGCCTaGACTGAAATTATCAAGGCT +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAGIFPA*TEIIKA
Trigger: AGCCTTGATAATTTCAGTTCAGGCTGGAAAAATGCC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGGCTGCCCATTCTGGATaGGCTGCAGGGATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMAAHSG*AAGISP
Trigger: TGGAGAAATCCCTGCAGCGCATCCAGAATGGGCAGC...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGACCCAAAAGACATTTaGAGAGCAGAGTTCAGAATG +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYADPKDI*RAEFRM
Trigger: CATTCTGAACTCTGCTCTGCAAATGTCTTTTGGGTC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGTGGGGTAGTCTCCAATaGCTGTGTACACGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMWGSLQ*LCTRGP
Trigger: TGGGCCACGTGTACACAGCCATTGGAGACTACCCCA...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGATGTGGGTGGCAAAGTaGACGCATTCAGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMMWVAK*THSAWV
Trigger: GACCCAGGCTGAATGCGTCCACTTTGCCACCCACAT...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCGGGTTGCTTTCTTCTTaGGATTTCACGGTACTGTCC +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAGLLSS*DFTVLS
Trigger: GGACAGTACCGTGAAATCCCAAGAAGAAAGCAACCC...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGAGAACACACTGTTTGTaGCTGGCCAGTGCATTGGGG +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMRTHCL*LASALG
Trigger: CCCCAATGCACTGGCCAGTCACAAACAGTGTGTTCT...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGTGGCTCAACTTGTCGTaGAGGTCTTTAGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMWLNLS*RSLASA
Trigger: GGCACTGGCTAAAGACCTTCACGACAAGTTGAGCCA...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGGCCTCTCCAAGTTCATaGGCAACCACGAGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMASPSS*ATTSLF
Trigger: AAAGAGGCTCGTGGTTGCTCATGAACTTGGAGAGGC...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCACCATCTCTAAGATCTaGTCAATAGTGACTGGGGAG +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRATISKI*SIVTGE
Trigger: CTCCCCAGTCACTATTGATCAGATCTTAGAGATGGT...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGGCGTTGGAAACAGACTaGGCAGAAGCAAGAGACTCG +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMALETD*AEARDS
Trigger: CGAGTCTCTTGCTTCTGCTCAGTCTGTTTCCAACGC...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCTTTAACAGTGACTGGTaGTGGCTGACTCTTCTGATG +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAFNSDW*WLTLLM
Trigger: CATCAGAAGAGTCAGCCATCACCAGTCACTGTTAAA...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGGCAGGGAGAATTGCTTaGACCCAGGAGGAAGAGGTT +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMAGRIA*TQEEEV
Trigger: AACCTCTTCCTCCTGGGTTCAAGCAATTCTCCCTGC...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTGAATTAAGAAAGCTTTaGCTCCCTTGCTCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFELRKL*LPCSVV
Trigger: GACCACAGAGCAAGGGAGTCAAAGCTTTCTTAATTC...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGCAGCCCTCTCGAAGGTaGCCAGGGATTCATAAGTCA +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMQPSRR*PGIHKS
Trigger: TGACTTATGAATCCCTGGGCACCTTCGAGAGGGCTG...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTAGGTTATGGACAGCCTaGACCTTTTCATCAATGGCT +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFRLWTA*TFSSMA
Trigger: AGCCATTGATGAAAAGGTGCAGGCTGTCCATAACCT...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGCCAGGAGGAAGAGGTTaGAGTGAGCCAAAATCGCAC +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMPGGRG*SEPKSH
Trigger: GTGCGATTTTGGCTCACTGCAACCTCTTCCTCCTGG...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGGCTGCAGTGATCATATaGTGGAGCGTCACTGGGACA +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMAAVII*WSVTGT
Trigger: TGTCCCAGTGACGCTCCAGCATATGATCACTGCAGC...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGGAAGCTGCTGATAAGTaGGCTCGAGGGAGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMEAADK*ARGSLS
Trigger: TGAGAGACTCCCTCGAGCCCACTTATCAGCAGCTTC...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCCAGAAAGTTCATCTTTaGATTGCTTGGCAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPQKVHL*IAWQEE
Trigger: TTCTTCTTGCCAAGCAATCCAAAGATGAACTTTCTG...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCGCCTTGTCATACTTCTaGATCATTCGGTATGCAGTG +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAALSYF*IIRYAV
Trigger: CACTGCATACCGAATGATCCAGAAGTATGACAAGGC...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGTCCAGGAGATGTGGGTaGCAAAGTGGACGCATTCAG +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMSRRCG*QSGRIQ
Trigger: CTGAATGCGTCCACTTTGCCACCCACATCTCCTGGA...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGACATCTCTGAGGTGGTaGGGCTGCTATATCCGGAAC +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMTSLRW*GCYIRN
Trigger: GTTCCGGATATAGCAGCCCCACCACCTCAGAGATGT...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGGGGATCCTTGGCACTTaGGAAAGAAGGAGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMGILGT*ERRRLR
Trigger: TCTCAGCCTCCTTCTTTCCCAAGTGCCAAGGATCCC...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGGTCTGCAAATGTGTGTaGCTGGGAGGTGGCAGAATC +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMVCKCV*LGGGRI
Trigger: GATTCTGCCACCTCCCAGCCACACACATTTGCAGAC...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGAACCAGATTATTGCATaGCATTTTTCCAGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYANQIIA*HFSSLN
Trigger: GTTCAGGCTGGAAAAATGCCATGCAATAATCTGGTT...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTTCATGTTCATCTTTGTaGTGCCCATGTTGCCATAGA +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFSCSSL*CPCCHR
Trigger: TCTATGGCAACATGGGCATCACAAAGATGAACATGA...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGGGCCTGGAAGTCACTTaGGTTTTCCACTGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMGLEVT*VFHCVL
Trigger: GAGAACACAGTGGAAAACTCAAGTGACTTCCAGGCC...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCACAAATTCAACAGACTaGGGACATCCCTTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRATNSTD*GHPFWK
Trigger: CTTCCAAAAGGGATGTCCTCAGTCTGTTGAATTTGT...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGACTTCCATGGAGATCTaGAGCTCCTGCCGATGGTAT +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMTSMEI*SSCRWY
Trigger: ATACCATCGGCAGGAGCTGCAGATCTCCATGGAAGT...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCTCATCTGTGCAGCAATaGTCAAGTGCTGTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRASSVQQ*SSAVLD
Trigger: ATCAAGAACAGCACTTGAGCATTGCTGCACAGATGA...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCAGGAGGAAGGCCAAGTaGCTTAGCAATCTCAATAAA +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRARRKAK*LSNLNK
Trigger: TTTATTGAGATTGCTAAGGCACTTGGCCTTCCTCCT...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCGCTCGAAATTTAGCCTaGGAATTATTCAGAGACTGG +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAARNLA*ELFRDW
Trigger: CCAGTCTCTGAATAATTCCCAGGCTAAATTTCGAGC...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGATCTGTAGATCAAGCTaGTGGTACTGCAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMICRSS*WYCRAV
Trigger: CACAGCCCTGCAGTACCACCAGCTTGATCTACAGAT...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGATCCACCCTCGGGTTTaGAGACAAAGCTCATTGAGG +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMIHPRV*RQSSLR
Trigger: CCTCAATGAGCTTTGTCTCCAAACCCGAGGGTGGAT...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGAACCACATAAACCATTaGCTCTTCAGTATGAAACCT +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYANHINH*LFSMKP
Trigger: AGGTTTCATACTGAAGAGCCAATGGTTTATGTGGTT...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCGCTCTTCATAACACTTaGATGCCATTGTGTATTTCC +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAALHNT*MPLCIS
Trigger: GGAAATACACAATGGCATTCAAGTGTTATGAAGAGC...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCTTTTCCAGCCTGAACTaGAATTATCAAGGCTACAGT +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAFSSLN*NYQGYS
Trigger: ACTGTAGCCTTGATAATTTCAGTTCAGGCTGGAAAA...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGTTTGTGACTGGCCAGTaGATTGGGGTAGTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMFVTGQ*IGVVSN
Trigger: ATTGGAGACTACCCCAATGCACTGGCCAGTCACAAA...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCCTTGTGGAGTTTCAGTaGAGTGTCATAATCACCTTT +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRALVEFQ*SVIITF
Trigger: AAAGGTGATTATGACACTGCACTGAAACTCCACAAG...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTATGCGATTCAGACTCTaGGCGACAGATAAATATTGT +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFMRFRL*ATDKYC
Trigger: ACAATATTTATCTGTCGCGCAGAGTCTGAATCGCAT...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGTCTCTTCGGCCCAGTTaGTCAGCTAACCTTAAACCT +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMSLRPS*SANLKP
Trigger: AGGTTTAAGGTTAGCTGAGCAACTGGGCCGAAGAGA...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGAGCACTAGTCCCCTCTaGCCATTTACCATCTCTAAG +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMSTSPL*PFTISK
Trigger: CTTAGAGATGGTAAATGGCCAGAGGGGACTAGTGCT...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGTTGCTTTTCCTAGACTaGAGAAACAAAACGTTATTC +
Preference number: 4 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYALLFLD*RNKTLF
Trigger: GAATAACGTTTTGTTTCTCCAGTCTAGGAAAAGCAA...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCAACCAGATTATTGCATaGCATTTTTCCAGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: NCFVNITSMDSSQVGQRANQIIA*HFSSLN
Trigger: GTTCAGGCTGGAAAAATGCCATGCAATAATCTGGTT...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGGACAGTAGGTACTTCTaGCACTCTTCAGCTTTACTG +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMDSRYF*HSSALL
Trigger: CAGTAAAGCTGAAGAGTGTCAGAAGTACCTACTGTC...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGTTACCCCTAACTAGATaGTTCCCTTGTCTTGCCTCA +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMLPLTR*FPCLAS
Trigger: TGAGGCAAGACAAGGGAATCATCTAGTTAGGGGTAA...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTATTGGCTCTTCAGTATaGAACCTAAAACAACGATGT +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFIGSSV*NLKQRC
Trigger: ACATCGTTGTTTTAGGTTTCATACTGAAGAGCCAAT...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTTTTTCCAGTGTAGCCTaGAACATTCACTGTGATTTT +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFFSSVA*NIHCDF
Trigger: AAAATCACAGTGAATGTTTCAGGCTACACTGGAAAA...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
39% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGGGCATGCCAGTTTCCTaGGCTAAAAGGAAATATATG +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMGMPVS*AKRKYM
Trigger: CATATATTTCCTTTTAGCTCAGGAAACTGGCATGCC...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR GCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGTTCGTAGTACTTCACTaGCTCCTGATAGTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMFVVLH*LLIVSK
Trigger: CTTGGAAACTATCAGGAGGCAGTGAAGTACTACGAA...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGAACATCTTCAGGTTATaGACAGCCTGCACCTTTTCA +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMNIFRL*TACTFS
Trigger: TGAAAAGGTGCAGGCTGTCCATAACCTGAAGATGTT...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CCA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTTTGCTTTTCCTAGACTaGAGAAACAAAACGTTATTC +
Preference number: 4 (lower is better)
Translates to: SGGDFTVASRLFYHFITFLLFLD*RNKTLF
Trigger: GAATAACGTTTTGTTTCTCCAGTCTAGGAAAAGCAA...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGATAGTTGCCAACCCCTaGTCTACACAAAGAAATCTT +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMIVANP*STQRNL
Trigger: AAGATTTCTTTGTGTAGATCAGGGGTTGGCAACTAT...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR TCA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGCCTGTAGAATTCAACTaGAATTTCATATATCCCACC +
Preference number: 4 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMPVEFN*NFIYPT
Trigger: GGTGGGATATATGAAATTTCAGTTGAATTCTACAGG...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 90 bp GAGGGCCGGCGGGCAGCGGCAGTGAGCCCAGCGAGGTGGTCTCGGTaGGCCAGTGTCCGTTGGGAGGGGCTTTCGGTGGAGCTCCGTCAT +
Preference number: 5 (lower is better)
Translates to: EGRRAAAVSPARWSR*ASVRWEGLSVELRH
Trigger: ATGACGGAGCTCCACCGAAAGCCCCTCCCAACGGACACTGGCGCACCGAGACCACCTCGCTGGGCTCACTGCCGCTGCCCGCCGGCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 90 bp CGGGTCGGAGGTTGGGAAGAAGACAGCCGCTGGCAGGCCACTGGTTaGGGGGTCCAGCCGGAAGCCCACAGCGGTGAGGAGGGCCTGCCA +
Preference number: 5 (lower is better)
Translates to: RVGGWEEDSRWQATG*GVQPEAHSGEEGLP
Trigger: TGGCAGGCCCTCCTCACCGCTGTGGGCTTCCGGCTGGACCCCCCAACCAGTGGCCTGCCAGCGGCTGTCTTCTTCCCAACCTCCGACCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000469670.1
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGCGCCCGGGTCGGAGGTaGGGAAGAAGACAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVRPGRR*GRRQPL
Trigger: CAGCGGCTGTCTTCTTCCCAACCTCCGACCCGGGCG...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 90 bp AGGTGCAGCAGCACTCGCAGGGCGTCCCGCGCACGCTCCGGGTGCTaGAGGATCTCTGTGAGGGCCTGGCCGATGAGTGATGAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: RCSSTRRASRARSGC*RISVRAWPMSDEGL
Trigger: CAGCCCCTCATCACTCATCGGCCAGGCCCTCACAGAGATCCTGCAGCACCCGGAGCGTGCGCGGGACGCCCTGCGAGTGCTGCTGCACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000469670.1
ENST00000612946.4
CDS GCA 90 bp ACCAGGTGCAGCAGCACTCGCAGGGCGTCCCGCGCACGCTCCGGGTaGTGCAGGATCTCTGTGAGGGCCTGGCCGATGAGTGATGAGGGG +
Preference number: 5 (lower is better)
Translates to: TRCSSTRRASRARSG*CRISVRAWPMSDEG
Trigger: CCCCTCATCACTCATCGGCCAGGCCCTCACAGAGATCCTGCAGCACCCGGAGCGTGCGCGGGACGCCCTGCGAGTGCTGCTGCACCTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000469670.1
ENST00000612946.4
CDS GCA 90 bp GGCAGCTGCAGGTCCAGGACGTCGGCGGCAGTAAGCAGCAGCTCCTaGAGGGGCGGGCAGTCCGAGATGCTCTCCCCATCACTGGCATCG +
Preference number: 5 (lower is better)
Translates to: GSCRSRTSAAVSSSS*RGGQSEMLSPSLAS
Trigger: CGATGCCAGTGATGGGGAGAGCATCTCGGACTGCCCGCCCCTGCAGGAGCTGCTGCTTACTGCCGCCGACGTCCTGGACCTGCAGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 90 bp GCGGCAGTGAGCCCAGCGAGGTGGTCTCGGTGCGCCAGTGTCCGTTaGGAGGGGCTTTCGGTGGAGCTCCGTCATGCTGCTGCAGGGACA +
Preference number: 5 (lower is better)
Translates to: AAVSPARWSRCASVR*EGLSVELRHAAAGT
Trigger: TGTCCCTGCAGCAGCATGACGGAGCTCCACCGAAAGCCCCTCCCAACGGACACTGGCGCACCGAGACCACCTCGCTGGGCTCACTGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 90 bp GGAGGGCAGGATTGGGCAGACCCAGCAGGGACTGGAGTGTGCTGCTaGACTGCTGGAGCCGGTCGCCCGGGTCGGAGGTTGGGAAGAAGA +
Preference number: 5 (lower is better)
Translates to: GGQDWADPAGTGVCC*TAGAGRPGRRLGRR
Trigger: TCTTCTTCCCAACCTCCGACCCGGGCGACCGGCTCCAGCAGTGCAGCAGCACACTCCAGTCCCTGCTGGGTCTGCCCAATCCTGCCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000469670.1
ENST00000612946.4
CDS CCA 90 bp AGTTGGAGGGGTGCGAGAAGGCCTTGCTGCTCTGCACCACCTTCATaGCCTCCCCCAGGGCGGCGCTGGCTTTCAGGCCGTTCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: SWRGARRPCCSAPPS*PPPGRRWLSGRSAG
Trigger: CCCTGCTGAACGGCCTGAAAGCCAGCGCCGCCCTGGGGGAGGCCATGAAGGTGGTGCAGAGCAGCAAGGCCTTCTCGCACCCCTCCAACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 90 bp CCAGCAGCTCGGACACCATGTAGGCCTCTTCCTCGGCCGATGGCATaGGCCCCCACAGCCACCTGTCCATCACGGCCGATGGTAGCTTGG +
Preference number: 5 (lower is better)
Translates to: PAARTPCRPLPRPMA*APTATCPSRPMVAW
Trigger: CCAAGCTACCATCGGCCGTGATGGACAGGTGGCTGTGGGGGCCCATGCCATCGGCCGAGGAAGAGGCCTACATGGTGTCCGAGCTGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGCTGAGCCGGTTGCTGTaGGAAGGGTTACACTGCTGC +
Preference number: 5 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVLSRLL*EGLHCC
Trigger: GCAGCAGTGTAACCCTTCCAACAGCAACCGGCTCAG...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGTTGCTGCTGGCAGGGTaGCCGTCCATGCTGGGCGTG +
Preference number: 5 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRLLLAG*PSMLGV
Trigger: CACGCCCAGCATGGACGGCAACCCTGCCAGCAGCAA...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGGCTGTGACTTTGCTGTaGGACTCCTGGGAGGAGCCA +
Preference number: 5 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVAVTLL*DSWEEP
Trigger: TGGCTCCTCCCAGGAGTCCAACAGCAAAGTCACAGC...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 90 bp CCTGGACATACTCTCCCCGAGAGCAGTGGAAATTGCCCAGGTTGCTaGGGGCCCGGGCCTCGCTCTGGATGTCTCGTAGCTCCCGGGCGA +
Preference number: 5 (lower is better)
Translates to: PGHTLPESSGNCPGC*GPGPRSGCLVAPGR
Trigger: TCGCCCGGGAGCTACGAGACATCCAGAGCGAGGCCCGGGCCCTCAGCAACCTGGGCAATTTCCACTGCTCTCGGGGAGAGTATGTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 90 bp CACCCCCAGGGCCTCCCGGACACTGGCAATGTGCTGCTCCAGGGCTaGGCCGGTTGCTGTTGGAAGGGTTACACTGCTGCTGGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: HPQGLPDTGNVLLQG*AGCCWKGYTAAGLE
Trigger: TTCCAGGCCAGCAGCAGTGTAACCCTTCCAACAGCAACCGGCTCAGCCCTGGAGCAGCACATTGCCAGTGTCCGGGAGGCCCTGGGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 90 bp AGCAGGTCATACAGGGCACGGAGCGGGGGCTTGGCAAACGAGCTCTaGCTCCTGGGAAGAGAGGAGGTCCCGTCCTGGGTCGGTGACACA +
Preference number: 5 (lower is better)
Translates to: SRSYRARSGGLANEL*LLGREEVPSWVGDT
Trigger: TGTGTCACCGACCCAGGACGGGACCTCCTCTCTTCCCAGGAGGCAGAGCTCGTTTGCCAAGCCCCCGCTCCGTGCCCTGTATGACCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 90 bp AGCTGGGAAGTCTGTGAGTCGCAGCCGGGCGATGGCCGGCCACTGTaGTGGCTCGGGCTGTCTTTGATGGACATCTCTGAGGTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: SWEVCESQPGDGRPL*WLGLSLMDISEVVG
Trigger: CCCCACCACCTCAGAGATGTCCATCAAAGACAGCCCGAGCCAGCACAGTGGCCGGCCATCGCCCGGCTGCGACTCACAGACTTCCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 90 bp AGGCCCTTGAGTAGTGAGACTCCACCCCCAGGGCCTCCCGGACACTaGCAATGTGCTGCTCCAGGGCTGAGCCGGTTGCTGTTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: RPLSSETPPPGPPGH*QCAAPGLSRLLLEG
Trigger: CCCTTCCAACAGCAACCGGCTCAGCCCTGGAGCAGCACATTGCCAGTGTCCGGGAGGCCCTGGGGGTGGAGTCTCACTACTCAAGGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 90 bp TGGGAAGTCTGTGAGTCGCAGCCGGGCGATGGCCGGCCACTGTGCTaGCTCGGGCTGTCTTTGATGGACATCTCTGAGGTGGTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: WEVCESQPGDGRPLC*LGLSLMDISEVVGL
Trigger: CAGCCCCACCACCTCAGAGATGTCCATCAAAGACAGCCCGAGCCAGCACAGTGGCCGGCCATCGCCCGGCTGCGACTCACAGACTTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGCGGGCCTCTTCTCGCTaGTTCCCCAGGTCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRRASSR*FPRSLA
Trigger: AGCCAAGGACCTGGGGAACAAGCGAGAAGAGGCCCG...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGCCGGTAAGCCTTGGCTaGGTCTTGCATGCGATTCAG +
Preference number: 5 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVPVSLG*VLHAIQ
Trigger: CTGAATCGCATGCAAGACCAAGCCAAGGCTTACCGG...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGAAAGCACACAAGGGCTaGCTGCAAGCTCCCCATTGC +
Preference number: 5 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVKAHKG*LQAPHC
Trigger: GCAATGGGGAGCTTGCAGCAAGCCCTTGTGTGCTTT...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 90 bp GGGGTACTTCAGTTTAAAGAGAGGCTGGTCCAGCTGGGAAGTCTGTaGGTCGCAGCCGGGCGATGGCCGGCCACTGTGCTGGCTCGGGCT +
Preference number: 5 (lower is better)
Translates to: GVLQFKERLVQLGSL*VAAGRWPATVLARA
Trigger: AGCCCGAGCCAGCACAGTGGCCGGCCATCGCCCGGCTGCGACTCACAGACTTCCCAGCTGGACCAGCCTCTCTTTAAACTGAAGTACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 90 bp CATACAGGGCACGGAGCGGGGGCTTGGCAAACGAGCTCTGCCTCCTaGGAAGAGAGGAGGTCCCGTCCTGGGTCGGTGACACAGTGTTAC +
Preference number: 5 (lower is better)
Translates to: HTGHGAGAWQTSSAS*EERRSRPGSVTQCY
Trigger: GTAACACTGTGTCACCGACCCAGGACGGGACCTCCTCTCTTCCCAGGAGGCAGAGCTCGTTTGCCAAGCCCCCGCTCCGTGCCCTGTATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGTTGTTCCCCAGGTCCTaGGCTATCTTCAGATGCTGC +
Preference number: 5 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVLFPRS*AIFRCC
Trigger: GCAGCATCTGAAGATAGCCAAGGACCTGGGGAACAA...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGTCTGCAGCCCGGTCCTaGAGATCCTCAGCAATGCCC +
Preference number: 5 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRSAARS*RSSAMP
Trigger: GGGCATTGCTGAGGATCTCAAGGACCGGGCTGCAGA...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGGTGGTTCTGATAGTGTaGCAGGGCCCGGTCATGGGC +
Preference number: 5 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRVVLIV*QGPVMG
Trigger: GCCCATGACCGGGCCCTGCAACACTATCAGAACCAC...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGTCAAGGCTGAGGCGCTaGGGTAGCTCAGTAGAATCA +
Preference number: 5 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVSRLRR*GSSVES
Trigger: TGATTCTACTGAGCTACCCAAGCGCCTCAGCCTTGA...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGTGTGTTTCGGTTTTCTaGGTAGGTCGCCAAGGGCTC +
Preference number: 5 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVCVSVF*VGRQGL
Trigger: GAGCCCTTGGCGACCTACCAAGAAAACCGAAACACA...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 90 bp CTGCCAGGAACTCGTGGCATCCCGGGAGCCGCCACAGCTGGACGCTaGTGGAGACCTGAATGGGAGCTGATGCCAAGTCCTGCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: LPGTRGIPGAATAGR*WRPEWELMPSPAPS
Trigger: AGAAGGAGCAGGACTTGGCATCAGCTCCCATTCAGGTCTCCATCAGCGTCCAGCTGTGGCGGCTCCCGGGATGCCACGAGTTCCTGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000480563.1
ENST00000612946.4
CDS GCA 90 bp GAGCAGATCCAGCTGAGGAGTAGGAGAGAGCTGGGGAGGGTGCACTaGCAGCAGGAGACTGGTGGCCGGAGCTTGGGGACATGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: EQIQLRSRRELGRVH*QQETGGRSLGTCSL
Trigger: CAAGGAACATGTCCCCAAGCTCCGGCCACCAGTCTCCTGCTGGCAGTGCACCCTCCCCAGCTCTCTCCTACTCCTCAGCTGGATCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 90 bp CATGGGCACCCAGGGCCTGGTAGGCCACGGCAAGGTTCCCATGTGTaGAGGCCTGTGAGGCGCGGTCATTCACTTCCATGGAGATCTGCA +
Preference number: 5 (lower is better)
Translates to: HGHPGPGRPRQGSHV*RPVRRGHSLPWRSA
Trigger: TGCAGATCTCCATGGAAGTGAATGACCGCGCCTCACAGGCCTCCACACATGGGAACCTTGCCGTGGCCTACCAGGCCCTGGGTGCCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGTATGCCTTTGGCCACTaGGGATTGAGAAGTCGAGCT +
Preference number: 5 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVYAFGH*GLRSRA
Trigger: AGCTCGACTTCTCAATCCCAAGTGGCCAAAGGCATA...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397906.6
CDS-3UTR CAA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGATGGAAATTGCCCAGGTaGCTGAGGGCCCGGGCCTCG +
Preference number: 5 (lower is better)
Translates to: GPAAVIICWSVTGTERAGWKLPR*LRARAS
Trigger: CGAGGCCCGGGCCCTCAGCAACCTGGGCAATTTCCA...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGCTATATGACACCGTCTaGGCCGCCAAGTCATTCATC +
Preference number: 5 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVLYDTV*AAKSFI
Trigger: GATGAATGACTTGGCGGCCAAGACGGTGTCATATAG...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGCCCTCCTCCTTCTTATaGTGCCGTGGTGACAAATTC +
Preference number: 5 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVPSSFL*CRGDKF
Trigger: GAATTTGTCACCACGGCACAATAAGAAGGAGGAGGG...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 90 bp CGAGCTCTGCCTCCTGGGAAGAGAGGAGGTCCCGTCCTGGGTCGGTaGCACAGTGTTACTGAACAGGCTCGTCATGCTCTGGCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: RALPPGKRGGPVLGR*HSVTEQARHALAAP
Trigger: AGGAGCTGCCAGAGCATGACGAGCCTGTTCAGTAACACTGTGTCACCGACCCAGGACGGGACCTCCTCTCTTCCCAGGAGGCAGAGCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 90 bp ACAGCCACCTGTCCATCACGGCCGATGGTAGCTTGGGGTTGCCGATaGCAGCCGCCATGGATGTGGAGCTGGAGTATGTGGGCGGGTTCT +
Preference number: 5 (lower is better)
Translates to: TATCPSRPMVAWGCR*QPPWMWSWSMWAGS
Trigger: AGAACCCGCCCACATACTCCAGCTCCACATCCATGGCGGCTGTCATCGGCAACCCCAAGCTACCATCGGCCGTGATGGACAGGTGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 90 bp GGCCTCCCCCAGGGCGGCGCTGGCTTTCAGGCCGTTCAGCAGGGATaGGTAGAAGGCATGGATGAACATCTTAGAAGCAGCCACTGGCAC +
Preference number: 5 (lower is better)
Translates to: GLPQGGAGFQAVQQG*VEGMDEHLRSSHWH
Trigger: GTGCCAGTGGCTGCTTCTAAGATGTTCATCCATGCCTTCTACTCATCCCTGCTGAACGGCCTGAAAGCCAGCGCCGCCCTGGGGGAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 90 bp TGGCCGGCCACTGTGCTGGCTCGGGCTGTCTTTGATGGACATCTCTaGGGTGGTGGGGCTGCTATATCCGGAACTCACCTTGGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: WPATVLARAVFDGHL*GGGAAISGTHLGQG
Trigger: TCCCTGCCCAAGGTGAGTTCCGGATATAGCAGCCCCACCACCTCAGAGATGTCCATCAAAGACAGCCCGAGCCAGCACAGTGGCCGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 90 bp AGGGCCTGCCAGCCAGGGATGCCGCCCACTTTGTTCTCCACACTCTaGTGGGATGTGTACATGGCATTGCGCTGCCCATTCTGGATGCGC +
Preference number: 5 (lower is better)
Translates to: RACQPGMPPTLFSTL*WDVYMALRCPFWMR
Trigger: GCGCATCCAGAATGGGCAGCGCAATGCCATGTACACATCCCAGCAGAGTGTGGAGAACAAAGTGGGCGGCATCCCTGGCTGGCAGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000469670.1
ENST00000612946.4
CDS GCA 90 bp CGCCAGTGTCCGTTGGGAGGGGCTTTCGGTGGAGCTCCGTCATGCTaGTGCAGGGACAGCTCCTTCAGTTCAAGCTTATCCACTCCCTCC +
Preference number: 5 (lower is better)
Translates to: RQCPLGGAFGGAPSC*CRDSSFSSSLSTPS
Trigger: GGAGGGAGTGGATAAGCTTGAACTGAAGGAGCTGTCCCTGCAGCAGCATGACGGAGCTCCACCGAAAGCCCCTCCCAACGGACACTGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 90 bp GTGCGCCAGTGTCCGTTGGGAGGGGCTTTCGGTGGAGCTCCGTCATaGTGCTGCAGGGACAGCTCCTTCAGTTCAAGCTTATCCACTCCC +
Preference number: 5 (lower is better)
Translates to: VRQCPLGGAFGGAPS*CCRDSSFSSSLSTP
Trigger: GGGAGTGGATAAGCTTGAACTGAAGGAGCTGTCCCTGCAGCAGCATGACGGAGCTCCACCGAAAGCCCCTCCCAACGGACACTGGCGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 90 bp GACAGCTTCCAGGAGATGTGGGTGGCAAAGTGGACGCATTCAGCCTaGGTCAGGGCACTCATGACCCTCTCCTTGGTGGCCACACTGCCC +
Preference number: 5 (lower is better)
Translates to: DSFQEMWVAKWTHSA*VRALMTLSLVATLP
Trigger: GGGCAGTGTGGCCACCAAGGAGAGGGTCATGAGTGCCCTGACCCAGGCTGAATGCGTCCACTTTGCCACCCACATCTCCTGGAAGCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 90 bp TCCATGCTGGGCGTGAGGACCAAGGCCGACAGCTTCCAGGAGATGTaGGTGGCAAAGTGGACGCATTCAGCCTGGGTCAGGGCACTCATG +
Preference number: 5 (lower is better)
Translates to: SMLGVRTKADSFQEM*VAKWTHSAWVRALM
Trigger: CATGAGTGCCCTGACCCAGGCTGAATGCGTCCACTTTGCCACCCACATCTCCTGGAAGCTGTCGGCCTTGGTCCTCACGCCCAGCATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGGCATCATCCAGTGCCTaGTCATACTGCTGGATTTTC +
Preference number: 5 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVASSSA*SYCWIF
Trigger: GAAAATCCAGCAGTATGACAAGGCACTGGATGATGC...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397906.6
CDS-3UTR CAA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGGTGCCTCATGTCGGATaGTTTCAAACAAGGCTGATG +
Preference number: 5 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVVPHVG*FQTRLM
Trigger: CATCAGCCTTGTTTGAAACAATCCGACATGAGGCAC...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGGGGGTCGGAGTCTTGTaGTCCTGTTTGTCGTTCCAC +
Preference number: 5 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRGVGVL*SCLSFH
Trigger: GTGGAACGACAAACAGGACAACAAGACTCCGACCCC...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAACGGCCGATGGTAGCTaGGGGTTGCCGATGACAGCC +
Preference number: 5 (lower is better)
Translates to: GPAAVIICWSVTGTERAGTADGS*GLPMTA
Trigger: GGCTGTCATCGGCAACCCCAAGCTACCATCGGCCGT...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGGGTGCGAGAAGGCCTaGCTGCTCTGCACCACCTTC +
Preference number: 5 (lower is better)
Translates to: GPAAVIICWSVTGTERAGGCEKA*LLCTTF
Trigger: GAAGGTGGTGCAGAGCAGCAAGGCCTTCTCGCACCC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCGCCCGGGTCGGAGGTaGGGAAGAAGACAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIRPGRR*GRRQPL
Trigger: CAGCGGCTGTCTTCTTCCCAACCTCCGACCCGGGCG...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGTGCGCCAGTGTCCGTaGGGAGGGGCTTTCGGTGGA +
Preference number: 5 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFVRQCP*GGAFGG
Trigger: TCCACCGAAAGCCCCTCCCAACGGACACTGGCGCAC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 90 bp GCACTGGTTTCTGACGCTCTGAAGACAGCAGTGCTGCTGGGCGCCTaGACGCCGTCTTCAGGGTTATTACTCTTGCTCACCTGGCCGCCG +
Preference number: 5 (lower is better)
Translates to: ALVSDALKTAVLLGA*TPSSGLLLLLTWPP
Trigger: CGGCGGCCAGGTGAGCAAGAGTAATAACCCTGAAGACGGCGTTCAGGCGCCCAGCAGCACTGCTGTCTTCAGAGCGTCAGAAACCAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 90 bp CCCCACCAGAAGCTGGAGACTCTTGGGGTCTTGAGCCAGTCCAGATaGAAAGGCTGCCAGGGCATCGGCATGACGTCCAAGGTACTGGAG +
Preference number: 5 (lower is better)
Translates to: PHQKLETLGVLSQSR*KGCQGIGMTSKVLE
Trigger: CTCCAGTACCTTGGACGTCATGCCGATGCCCTGGCAGCCTTTGCATCTGGACTGGCTCAAGACCCCAAGAGTCTCCAGCTTCTGGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397906.6
ENST00000490475.1
ENST00000612946.4
CDS GCA 90 bp CAGTGTCCGTTGGGAGGGGCTTTCGGTGGAGCTCCGTCATGCTGCTaGAGGGACAGCTCCTTCAGTTCAAGCTTATCCACTCCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: QCPLGGAFGGAPSCC*RDSSFSSSLSTPSS
Trigger: GGAGGAGGGAGTGGATAAGCTTGAACTGAAGGAGCTGTCCCTGCAGCAGCATGACGGAGCTCCACCGAAAGCCCCTCCCAACGGACACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 90 bp CCTGCCGTCCTCCGGGGCCTCCACCCTCTGATCCACCCTCGGGTTTaGAGACAAAGCTCATTGAGGAGGCAATGGAGCTCAGACTGTACA +
Preference number: 5 (lower is better)
Translates to: PAVLRGLHPLIHPRV*RQSSLRRQWSSDCT
Trigger: TGTACAGTCTGAGCTCCATTGCCTCCTCAATGAGCTTTGTCTCCAAACCCGAGGGTGGATCAGAGGGTGGAGGCCCCGGAGGACGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGTTTGGCCACTTGGGATaGAGAAGTCGAGCTTTGATT +
Preference number: 5 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVFGHLG*RSRALI
Trigger: AATCAAAGCTCGACTTCTCAATCCCAAGTGGCCAAA...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397906.6
CDS-3UTR CAA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGGCTGCCTCTCGATCTTaGAGTTTCATGGCGAGTACC +
Preference number: 5 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRAASRS*SFMAST
Trigger: GGTACTCGCCATGAAACTCAAAGATCGAGAGGCAGC...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTACGGGCCTCTTCTCGCTaGTTCCCCAGGTCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLRASSR*FPRSLA
Trigger: AGCCAAGGACCTGGGGAACAAGCGAGAAGAGGCCCG...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCACGGCCGATGGTAGCTaGGGGTTGCCGATGACAGCC +
Preference number: 5 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTTADGS*GLPMTA
Trigger: GGCTGTCATCGGCAACCCCAAGCTACCATCGGCCGT...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGGGATGCCGCCCACTTaGTTCTCCACACTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GPAAVIICWSVTGTERAGGMPPT*FSTLCW
Trigger: CCAGCAGAGTGTGGAGAACAAAGTGGGCGGCATCCC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGCCAGGTTGGGGTTGTTaGTGGTCTGGTGAGAAGCAT +
Preference number: 5 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRPGWGC*WSGEKH
Trigger: ATGCTTCTCACCAGACCACAAACAACCCCAACCTGG...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGTGCGCCAGTGTCCGTaGGGAGGGGCTTTCGGTGGA +
Preference number: 5 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIVRQCP*GGAFGG
Trigger: TCCACCGAAAGCCCCTCCCAACGGACACTGGCGCAC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 90 bp ACTCTTCTGATGGGAGAGAACAGGCCTGCTGAACGCACTGGTTTCTaGCGCTCTGAAGACAGCAGTGCTGCTGGGCGCCTGAACGCCGTC +
Preference number: 5 (lower is better)
Translates to: TLLMGENRPAERTGF*RSEDSSAAGRLNAV
Trigger: GACGGCGTTCAGGCGCCCAGCAGCACTGCTGTCTTCAGAGCGTCAGAAACCAGTGCGTTCAGCAGGCCTGTTCTCTCCCATCAGAAGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 90 bp GCCTGTGAGGCGCGGTCATTCACTTCCATGGAGATCTGCAGCTCCTaGCGATGGTATTTGACCGCCTGGTCGTACATGCCCAGGGCATTG +
Preference number: 5 (lower is better)
Translates to: ACEARSFTSMEICSS*RWYLTAWSYMPRAL
Trigger: CAATGCCCTGGGCATGTACGACCAGGCGGTCAAATACCATCGGCAGGAGCTGCAGATCTCCATGGAAGTGAATGACCGCGCCTCACAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 90 bp TGTGTGGAGGCCTGTGAGGCGCGGTCATTCACTTCCATGGAGATCTaGAGCTCCTGCCGATGGTATTTGACCGCCTGGTCGTACATGCCC +
Preference number: 5 (lower is better)
Translates to: CVEACEARSFTSMEI*SSCRWYLTAWSYMP
Trigger: GGGCATGTACGACCAGGCGGTCAAATACCATCGGCAGGAGCTGCAGATCTCCATGGAAGTGAATGACCGCGCCTCACAGGCCTCCACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 90 bp ATTTCATGGCGGCTTCCACCATCCCCACCAGAAGCTGGAGACTCTTaGGGTCTTGAGCCAGTCCAGATGCAAAGGCTGCCAGGGCATCGG +
Preference number: 5 (lower is better)
Translates to: ISWRLPPSPPEAGDS*GLEPVQMQRLPGHR
Trigger: CCGATGCCCTGGCAGCCTTTGCATCTGGACTGGCTCAAGACCCCAAGAGTCTCCAGCTTCTGGTGGGGATGGTGGAAGCCGCCATGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397906.6
ENST00000490475.1
ENST00000612946.4
CDS CCA 90 bp TTGGCAAACGAGCTCTGCCTCCTGGGAAGAGAGGAGGTCCCGTCCTaGGTCGGTGACACAGTGTTACTGAACAGGCTCGTCATGCTCTGG +
Preference number: 5 (lower is better)
Translates to: LANELCLLGREEVPS*VGDTVLLNRLVMLW
Trigger: CCAGAGCATGACGAGCCTGTTCAGTAACACTGTGTCACCGACCCAGGACGGGACCTCCTCTCTTCCCAGGAGGCAGAGCTCGTTTGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 90 bp TCCACACTCTGCTGGGATGTGTACATGGCATTGCGCTGCCCATTCTaGATGCGCTGCAGGGATTTCTCCACCAGGTGCAGCAGCACTCGC +
Preference number: 5 (lower is better)
Translates to: STLCWDVYMALRCPF*MRCRDFSTRCSSTR
Trigger: GCGAGTGCTGCTGCACCTGGTGGAGAAATCCCTGCAGCGCATCCAGAATGGGCAGCGCAATGCCATGTACACATCCCAGCAGAGTGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000469670.1
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTATCTGCAGCCCGGTCCTaGAGATCCTCAGCAATGCCC +
Preference number: 5 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLSAARS*RSSAMP
Trigger: GGGCATTGCTGAGGATCTCAAGGACCGGGCTGCAGA...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGGCAGTAGGCTTTTGCTaGGCTCAACTTGTCGTGAAG +
Preference number: 5 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRAVGFC*AQLVVK
Trigger: CTTCACGACAAGTTGAGCCAAGCAAAAGCCTACTGC...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGATGGTAGCTTGGGGTaGCCGATGACAGCCGCCATG +
Preference number: 5 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFDGSLG*PMTAAM
Trigger: CATGGCGGCTGTCATCGGCAACCCCAAGCTACCATC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAGATGGTAGCTTGGGGTaGCCGATGACAGCCGCCATG +
Preference number: 5 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLDGSLG*PMTAAM
Trigger: CATGGCGGCTGTCATCGGCAACCCCAAGCTACCATC...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCCCGTCGGCTGTGACTTaGCTGTTGGACTCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTPSAVT*LLDSWE
Trigger: CTCCCAGGAGTCCAACAGCAAAGTCACAGCCGACGG...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCATGAACCCTGCCCAGTaGGAGGGGTGCGAGAAGGCC +
Preference number: 5 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIMNPAQ*EGCEKA
Trigger: GGCCTTCTCGCACCCCTCCAACTGGGCAGGGTTCAT...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGCAGAAGTCCTGGCTTTaGGTGAATGTGGCCCAGAAA +
Preference number: 5 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRQKSWL*VNVAQK
Trigger: TTTCTGGGCCACATTCACCAAAAGCCAGGACTTCTG...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 90 bp CAGGGAGGAGCTCCTGGCTGGGGGCTTTGGTTTAACAGTGACTGGTaGTGGCTGACTCTTCTGATGGGAGAGAACAGGCCTGCTGAACGC +
Preference number: 5 (lower is better)
Translates to: QGGAPGWGLWFNSDW*WLTLLMGENRPAER
Trigger: GCGTTCAGCAGGCCTGTTCTCTCCCATCAGAAGAGTCAGCCATCACCAGTCACTGTTAAACCAAAGCCCCCAGCCAGGAGCTCCTCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 90 bp TGGCCTTGTCAAAGTTCCTCCGGTAGTGATAGGCACTGCCCAGGTTaGTATAAGCCCGGGCCTCTTCTCGCTTGTTCCCCAGGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: WPCQSSSGSDRHCPG*YKPGPLLACSPGPW
Trigger: CCAAGGACCTGGGGAACAAGCGAGAAGAGGCCCGGGCTTATAGCAACCTGGGCAGTGCCTATCACTACCGGAGGAACTTTGACAAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 90 bp CAAAGCTCATTGAGGAGGCAATGGAGCTCAGACTGTACACAGAGATaGCATCTGAGGCGATGCTGTCCGCACCGGTGGGAGAGAAGGGGG +
Preference number: 5 (lower is better)
Translates to: QSSLRRQWSSDCTQR*HLRRCCPHRWERRG
Trigger: CCCCCTTCTCTCCCACCGGTGCGGACAGCATCGCCTCAGATGCCATCTCTGTGTACAGTCTGAGCTCCATTGCCTCCTCAATGAGCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCTGCTGGCACAGGCCCTaGAGTAGTGAGACTCCACCC +
Preference number: 5 (lower is better)
Translates to: PPKWDKEPRAMQEAFASICWHRP*SSETPP
Trigger: GGGTGGAGTCTCACTACTCAAGGGCCTGTGCCAGCA...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGACCGAGTTGAGTTTGTaGTTCATCTCTTCAAATTGC +
Preference number: 5 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVTELSL*FISSNC
Trigger: GCAATTTGAAGAGATGAACAACAAACTCAACTCGGT...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGAGTTTGCAAAGGGCTaGGAGGGCAGGATTGGGCAG +
Preference number: 5 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFEFAKG*EGRIGQ
Trigger: CTGCCCAATCCTGCCCTCCAAGCCCTTTGCAAACTC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGATCTTCTTCATCTTTGTaGCCTGCAGGGCGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: GPAAVIICWSVTGTERAGSSSSL*PAGRVW
Trigger: CCAGACCCGCCCTGCAGGCAACAAAGATGAAGAAGA...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTACCCGGAAGATCTTCATaGGCCCTGTGGAATGCTGGG +
Preference number: 5 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLPGRSS*ALWNAG
Trigger: CCCAGCATTCCACAGGGCCAATGAAGATCTTCCGGG...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTGCCAGGCCCCTCAGGTCTGCTCCATGTGCTGCTGGTGGCCCAGGCCAGGTGCACAGTGCTATAAATTaGGTCTTCACTTGCTACACT +
Preference number: 5 (lower is better)
Translates to: PARPLRSAPCAAGGPGQVHSAIN*VFTCYT
Trigger: AGTGTAGCAAGTGAAGACCAAATTTATAGCACTGTG...CACCTGGCCTGGGCCACCAGCAGCACATGGAGCAGACCTGAGGGGCCTGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTACTATGCAGGAGGCATTaGCTTCCATCCACGTGGCCC +
Preference number: 5 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLLCRRH*LPSTWP
Trigger: GGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAG...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGAGGCTACAGTTCTTCTaGTGGGTCTGCAAATGTGTG +
Preference number: 5 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRRLQFF*WVCKCV
Trigger: CACACATTTGCAGACCCACAAGAAGAACTGTAGCCT...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 90 bp GCCAGCAGGAGACTGGTGGCCGGAGCTTGGGGACATGTTCCTTGGTaGTTTGGAAATGTGAGCGCTGTAAGGAGAGCTGGGGTACTTCAG +
Preference number: 5 (lower is better)
Translates to: ASRRLVAGAWGHVPW*FGNVSAVRRAGVLQ
Trigger: CTGAAGTACCCCAGCTCTCCTTACAGCGCTCACATTTCCAAATCACCAAGGAACATGTCCCCAAGCTCCGGCCACCAGTCTCCTGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 90 bp GCTGCTCCAGGGCTGAGCCGGTTGCTGTTGGAAGGGTTACACTGCTaGTGGCCTGGAAGTCACTTGAGTTTTCCACTGTGTTCTCACCCA +
Preference number: 5 (lower is better)
Translates to: AAPGLSRLLLEGLHC*WPGSHLSFPLCSHP
Trigger: TGGGTGAGAACACAGTGGAAAACTCAAGTGACTTCCAGGCCAGCAGCAGTGTAACCCTTCCAACAGCAACCGGCTCAGCCCTGGAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 90 bp GCTCCAGGGCTGAGCCGGTTGCTGTTGGAAGGGTTACACTGCTGCTaGCCTGGAAGTCACTTGAGTTTTCCACTGTGTTCTCACCCAGGT +
Preference number: 5 (lower is better)
Translates to: APGLSRLLLEGLHCC*PGSHLSFPLCSHPG
Trigger: ACCTGGGTGAGAACACAGTGGAAAACTCAAGTGACTTCCAGGCCAGCAGCAGTGTAACCCTTCCAACAGCAACCGGCTCAGCCCTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGATTGTTCCCCAGGTCCTaGGCTATCTTCAGATGCTGC +
Preference number: 5 (lower is better)
Translates to: GPAAVIICWSVTGTERAGLFPRS*AIFRCC
Trigger: GCAGCATCTGAAGATAGCCAAGGACCTGGGGAACAA...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCTCCTGCCGATGGTATTaGACCGCCTGGTCGTACATG +
Preference number: 5 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTSCRWY*TAWSYM
Trigger: CATGTACGACCAGGCGGTCAAATACCATCGGCAGGA...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCTTCTCCTTCCATGTCTaGAAGGTCGGGAGCAAGCCG +
Preference number: 5 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTFSFHV*KVGSKP
Trigger: CGGCTTGCTCCCGACCTTCAAGACATGGAAGGAGAA...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAGAGGCAGTGATGAGTTaGCAAAGGGCTTGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLEAVMS*QRAWRA
Trigger: TGCCCTCCAAGCCCTTTGCAAACTCATCACTGCCTC...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTATCTTCTTCATCTTTGTaGCCTGCAGGGCGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLSSSSL*PAGRVW
Trigger: CCAGACCCGCCCTGCAGGCAACAAAGATGAAGAAGA...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGTTGGGGACATGTTCCTaGGTGATTTGGAAATGTGAG +
Preference number: 5 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRLGTCS*VIWKCE
Trigger: CTCACATTTCCAAATCACCAAGGAACATGTCCCCAA...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGATCTCTCTCTTCCCGGTaGGCCATAATCCAGGCATAC +
Preference number: 5 (lower is better)
Translates to: GPAAVIICWSVTGTERAGSLSSR*AIIQAY
Trigger: GTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGA...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 90 bp GGTCATTCACTTCCATGGAGATCTGCAGCTCCTGCCGATGGTATTTaGCCGCCTGGTCGTACATGCCCAGGGCATTGTAGGCATTGCCCA +
Preference number: 5 (lower is better)
Translates to: GHSLPWRSAAPADGI*PPGRTCPGHCRHCP
Trigger: TGGGCAATGCCTACAATGCCCTGGGCATGTACGACCAGGCGGTCAAATACCATCGGCAGGAGCTGCAGATCTCCATGGAAGTGAATGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 90 bp TCTCATGCCTCCGGCTGTCCCAGGTTGGGGTTGTTTGTGGTCTGGTaGGAAGCATGTGTTTCGGTTTTCTTGGTAGGTCGCCAAGGGCTC +
Preference number: 5 (lower is better)
Translates to: SHASGCPRLGLFVVW*EACVSVFLVGRQGL
Trigger: GAGCCCTTGGCGACCTACCAAGAAAACCGAAACACATGCTTCTCACCAGACCACAAACAACCCCAACCTGGGACAGCCGGAGGCATGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 90 bp GGTAAGACATGGCCTTGTCAAAGTTCCTCCGGTAGTGATAGGCACTaGCCAGGTTGCTATAAGCCCGGGCCTCTTCTCGCTTGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: GKTWPCQSSSGSDRH*PGCYKPGPLLACSP
Trigger: TGGGGAACAAGCGAGAAGAGGCCCGGGCTTATAGCAACCTGGGCAGTGCCTATCACTACCGGAGGAACTTTGACAAGGCCATGTCTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 90 bp CCCTCTGCAGCCCGGTCCTTGAGATCCTCAGCAATGCCCAGCTGCTaGTCATGGTATTGTTTAGCTCTCTCCAAATCCTGCATGCACCTG +
Preference number: 5 (lower is better)
Translates to: PSAARSLRSSAMPSC*SWYCLALSKSCMHL
Trigger: CAGGTGCATGCAGGATTTGGAGAGAGCTAAACAATACCATGAGCAGCAGCTGGGCATTGCTGAGGATCTCAAGGACCGGGCTGCAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 90 bp ATTTCCCAAGGGCCATGTAGACAGCAGCCAGGTGCCCATGAGCTCTaGACTCCCCTGGCAAGTCACTCAGCTCCTGATATACCTCCAGTT +
Preference number: 5 (lower is better)
Translates to: ISQGPCRQQPGAHEL*TPLASHSAPDIPPV
Trigger: AACTGGAGGTATATCAGGAGCTGAGTGACTTGCCAGGGGAGTGCAGAGCTCATGGGCACCTGGCTGCTGTCTACATGGCCCTTGGGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 90 bp TGTGCTGCTCCAGGGCTGAGCCGGTTGCTGTTGGAAGGGTTACACTaGTGCTGGCCTGGAAGTCACTTGAGTTTTCCACTGTGTTCTCAC +
Preference number: 5 (lower is better)
Translates to: CAAPGLSRLLLEGLH*CWPGSHLSFPLCSH
Trigger: GTGAGAACACAGTGGAAAACTCAAGTGACTTCCAGGCCAGCAGCAGTGTAACCCTTCCAACAGCAACCGGCTCAGCCCTGGAGCAGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 90 bp ACTTTGTTCTCCACACTCTGCTGGGATGTGTACATGGCATTGCGCTaGCCATTCTGGATGCGCTGCAGGGATTTCTCCACCAGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: TLFSTLCWDVYMALR*PFWMRCRDFSTRCS
Trigger: GCTGCACCTGGTGGAGAAATCCCTGCAGCGCATCCAGAATGGGCAGCGCAATGCCATGTACACATCCCAGCAGAGTGTGGAGAACAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000469670.1
ENST00000612946.4
CDS CCA 90 bp AGCTCCCCATTGCCCTGTGTCCATTTCCCAGGCCCCGGTAAGCCTTaGCTTGGTCTTGCATGCGATTCAGACTCTGCGCGACAGATAAAT +
Preference number: 5 (lower is better)
Translates to: SSPLPCVHFPGPGKP*LGLACDSDSARQIN
Trigger: ATTTATCTGTCGCGCAGAGTCTGAATCGCATGCAAGACCAAGCCAAGGCTTACCGGGGCCTGGGAAATGGACACAGGGCAATGGGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 90 bp GCCTCCTCCAAGTTTCCACTAGCCCAAAGGGAGAGGCCAAGGCCATaGCGAATTTTTGCCTCATCTTCTCTTCGGCCCAGTTGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: ASSKFPLAQRERPRP*RIFASSSLRPSCSA
Trigger: AGCTGAGCAACTGGGCCGAAGAGAAGATGAGGCAAAAATTCGCCATGGCCTTGGCCTCTCCCTTTGGGCTAGTGGAAACTTGGAGGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGCTGCCTCTCGATCTTaGAGTTTCATGGCGAGTACC +
Preference number: 5 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFAASRS*SFMAST
Trigger: GGTACTCGCCATGAAACTCAAAGATCGAGAGGCAGC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCTACACAGCTCCCATGTaGCCAAGTTCTCGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTYTAPM*PSSRAS
Trigger: TGAAGCCCGAGAACTTGGCAACATGGGAGCTGTGTA...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAATGCACAGGTGGGTCTaGTGGAGTTTCAGTGCAGTG +
Preference number: 5 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLMHRWV*WSFSAV
Trigger: CACTGCACTGAAACTCCACAAGACCCACCTGTGCAT...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAAGCCTTGGCTTGGTCTaGCATGCGATTCAGACTCTG +
Preference number: 5 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLSLGLV*HAIQTL
Trigger: CAGAGTCTGAATCGCATGCAAGACCAAGCCAAGGCT...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCGCTCAAGTGCTGTTCTaGATAGACCACAGCCCTCTC +
Preference number: 5 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTAQVLF*IDHSPL
Trigger: GAGAGGGCTGTGGTCTATCAAGAACAGCACTTGAGC...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGGCCATGGCGAATTTTaGCCTCATCTTCTCTTCGGC +
Preference number: 5 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFGHGEF*PHLLFG
Trigger: GCCGAAGAGAAGATGAGGCAAAAATTCGCCATGGCC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTACCTATAAAGCTGGTGTaGGGCCTCCTCCAAGTTTCC +
Preference number: 5 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLPIKLV*GLLQVS
Trigger: GGAAACTTGGAGGAGGCCCAACACCAGCTTTATAGG...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGTTGCTGCTGGCAGGGTaGCCGTCCATGCTGGGCGTG +
Preference number: 5 (lower is better)
Translates to: SPRRPKMANTAYKERECQLLLAG*PSMLGV
Trigger: CACGCCCAGCATGGACGGCAACCCTGCCAGCAGCAA...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTGTGTTTCGGTTTTCTaGGTAGGTCGCCAAGGGCTC +
Preference number: 5 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFCVSVF*VGRQGL
Trigger: GAGCCCTTGGCGACCTACCAAGAAAACCGAAACACA...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCTGGCTCGGGCTGTCTTaGATGGACATCTCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIWLGLS*MDISEV
Trigger: CACCTCAGAGATGTCCATCAAAGACAGCCCGAGCCA...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGAAAATTCAAGTTTGGTaGACAGCGGGACCCAAAAGA +
Preference number: 5 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRKIQVW*TAGPKR
Trigger: TCTTTTGGGTCCCGCTGTCAACCAAACTTGAATTTT...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCTCTCTCTCTTCCCGGTaGGCCATAATCCAGGCATAC +
Preference number: 5 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTSLSSR*AIIQAY
Trigger: GTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGA...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCAGGCCAGGTGGCCGCCCACCTTCATGAGGAACCCTGTAGTGAGGTGGGTAGGGCTTATTGTTGGCTTTaGTCAACATGGCTGTTGGTT +
Preference number: 5 (lower is better)
Translates to: PGQVAAHLHEEPCSEVGRAYCWL*STWLLV
Trigger: AACCAACAGCCATGTTGACAAAAGCCAACAATAAGC...CCTACCCACCTCACTACAGGGTTCCTCATGAAGGTGGGCGGCCACCTGGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGCGTGGGTGACACCTTaGTCTCCTGCTAAAACCCAG +
Preference number: 5 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIAWVTP*SPAKTQ
Trigger: CTGGGTTTTAGCAGGAGACAAAGGTGTCACCCACGC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 90 bp CATAGGCACGGCCCTGGGCAGCATAATCACTCAGCTCCTGGGCAATaGACAGGTGGGTCTTGTGGAGTTTCAGTGCAGTGTCATAATCAC +
Preference number: 5 (lower is better)
Translates to: HRHGPGQHNHSAPGQ*TGGSCGVSVQCHNH
Trigger: GTGATTATGACACTGCACTGAAACTCCACAAGACCCACCTGTGCATTGCCCAGGAGCTGAGTGATTATGCTGCCCAGGGCCGTGCCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 90 bp GAACACACTGTTTGTGACTGGCCAGTGCATTGGGGTAGTCTCCAATaGCTGTGTACACGTGGCCCAGACTGCTCAAGGCTGATGAAGCTG +
Preference number: 5 (lower is better)
Translates to: EHTVCDWPVHWGSLQ*LCTRGPDCSRLMKL
Trigger: CAGCTTCATCAGCCTTGAGCAGTCTGGGCCACGTGTACACAGCCATTGGAGACTACCCCAATGCACTGGCCAGTCACAAACAGTGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 90 bp CCTTTGGAGCTCACCGAGACTCTCATGCCTCCGGCTGTCCCAGGTTaGGGTTGTTTGTGGTCTGGTGAGAAGCATGTGTTTCGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: PLELTETLMPPAVPG*GCLWSGEKHVFRFS
Trigger: AGAAAACCGAAACACATGCTTCTCACCAGACCACAAACAACCCCAACCTGGGACAGCCGGAGGCATGAGAGTCTCGGTGAGCTCCAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCACAGAACCTCTCAGTTaGAGGCTGCAGGTGCCAATC +
Preference number: 5 (lower is better)
Translates to: PPKWDKEPRAMQEAFASITEPLS*RLQVPI
Trigger: GATTGGCACCTGCAGCCTCAAACTGAGAGGTTCTGT...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAAGTTGCAGTAGGCTTTaGCTTGGCTCAACTTGTCGT +
Preference number: 5 (lower is better)
Translates to: GPAAVIICWSVTGTERAGSCSRL*LGSTCR
Trigger: ACGACAAGTTGAGCCAAGCAAAAGCCTACTGCAACT...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGTCTTGTTGTCCTGTTaGTCGTTCCACCAGAAGATC +
Preference number: 5 (lower is better)
Translates to: GPAAVIICWSVTGTERAGVLLSC*SFHQKI
Trigger: GATCTTCTGGTGGAACGACAAACAGGACAACAAGAC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGCACGGAGCGGGGGCTaGGCAAACGAGCTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAARSGG*ANELCL
Trigger: GAGGCAGAGCTCGTTTGCCAAGCCCCCGCTCCGTGC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGATGTGTACATGGCATaGCGCTGCCCATTCTGGATG +
Preference number: 5 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIDVYMA*RCPFWM
Trigger: CATCCAGAATGGGCAGCGCAATGCCATGTACACATC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCTGGAGACAAAGCTCATaGAGGAGGCAATGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTWRQSS*RRQWSS
Trigger: TGAGCTCCATTGCCTCCTCAATGAGCTTTGTCTCCA...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTATTCTTCTTCATCTTaGTTGCCTGCAGGGCGGGTC +
Preference number: 5 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFYSSSS*LPAGRV
Trigger: GACCCGCCCTGCAGGCAACAAAGATGAAGAAGAATA...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGCTGCCATTTTCAGTTaGTCTATGTCGGGAGCGTCT +
Preference number: 5 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFAAIFS*SMSGAS
Trigger: AGACGCTCCCGACATAGACAAACTGAAAATGGCAGC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCTGAGGACATCCCTTTaGGAAGTCATCGTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: PPKWDKEPRAMQEAFASILRTSL*EVIVPG
Trigger: TCCTGGCACGATGACTTCCAAAAGGGATGTCCTCAG...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 90 bp CCTGTGGTTAGTGAGAGCCTCCCGGTAATTTCCTTTGGAGAAGAATaGAGAGCCCAGATTCCCATGAGCTCGGCATTCTCCTGTCTGGTC +
Preference number: 5 (lower is better)
Translates to: PVVSESLPVISFGEE*RAQIPMSSAFSCLV
Trigger: GACCAGACAGGAGAATGCCGAGCTCATGGGAATCTGGGCTCTGCATTCTTCTCCAAAGGAAATTACCGGGAGGCTCTCACTAACCACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397906.6
ENST00000490475.1
ENST00000612946.4
CDS GCA 90 bp GGAGTCTTGTTGTCCTGTTTGTCGTTCCACCAGAAGATCAGCAAATaGCCTTGTCCGTCCCCTTTCTGCCACAGCCAGGGCTTCATCATG +
Preference number: 5 (lower is better)
Translates to: GVLLSCLSFHQKISK*PCPSPFCHSQGFIM
Trigger: CATGATGAAGCCCTGGCTGTGGCAGAAAGGGGACGGACAAGGGCATTTGCTGATCTTCTGGTGGAACGACAAACAGGACAACAAGACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 90 bp TCAACAAATTCAGCTTTGCTCAGTACCGGTCCATCAGGACTTCTCTaGCCAATAGTGTCAGCACCAAAGAGAGGAATCGGCGCCGACGCC +
Preference number: 5 (lower is better)
Translates to: STNSALLSTGPSGLL*PIVSAPKRGIGADA
Trigger: GGCGTCGGCGCCGATTCCTCTCTTTGGTGCTGACACTATTGGCCAGAGAAGTCCTGATGGACCGGTACTGAGCAAAGCTGAATTTGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000468807.1
CDS CCA 90 bp CTGATCCACCCTCGGGTTTGGAGACAAAGCTCATTGAGGAGGCAATaGAGCTCAGACTGTACACAGAGATGGCATCTGAGGCGATGCTGT +
Preference number: 5 (lower is better)
Translates to: LIHPRVWRQSSLRRQ*SSDCTQRWHLRRCC
Trigger: ACAGCATCGCCTCAGATGCCATCTCTGTGTACAGTCTGAGCTCCATTGCCTCCTCAATGAGCTTTGTCTCCAAACCCGAGGGTGGATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000612946.4
CDS-3UTR CAA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTTGAGAAGTCGAGCTTaGATTGCATCATCCAGTGCC +
Preference number: 5 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFLRSRA*IASSSA
Trigger: GGCACTGGATGATGCAATCAAAGCTCGACTTCTCAA...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397906.6
CDS-3UTR CAA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCTGTATGATTCCTAGATaGGAGGATGCTCGCCCCTCT +
Preference number: 5 (lower is better)
Translates to: PPKWDKEPRAMQEAFASICMIPR*EDARPS
Trigger: AGAGGGGCGAGCATCCTCCAATCTAGGAATCATACA...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAAGTTGCAGTAGGCTTTaGCTTGGCTCAACTTGTCGT +
Preference number: 5 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLSCSRL*LGSTCR
Trigger: ACGACAAGTTGAGCCAAGCAAAAGCCTACTGCAACT...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGTCTTGTTGTCCTGTTaGTCGTTCCACCAGAAGATC +
Preference number: 5 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFVLLSC*SFHQKI
Trigger: GATCTTCTGGTGGAACGACAAACAGGACAACAAGAC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTGGCCTGGAAGTCACTaGAGTTTTCCACTGTGTTCT +
Preference number: 5 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFWPGSH*SFPLCS
Trigger: AGAACACAGTGGAAAACTCAAGTGACTTCCAGGCCA...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGCCAGGGCTGAGCCGGTaGCTGTTGGAAGGGTTACAC +
Preference number: 5 (lower is better)
Translates to: SPRRPKMANTAYKERECQPGLSR*LLEGLH
Trigger: GTGTAACCCTTCCAACAGCAACCGGCTCAGCCCTGG...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTGGGTCAGTGACCGAGTaGAGTTTGTTGTTCATCTCT +
Preference number: 5 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFGSVTE*SLLFIS
Trigger: AGAGATGAACAACAAACTCAACTCGGTCACTGACCC...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGCTCATGACCCTCTCCTaGGTGGCCACACTGCCCACT +
Preference number: 5 (lower is better)
Translates to: SPRRPKMANTAYKERECQLMTLS*VATLPT
Trigger: AGTGGGCAGTGTGGCCACCAAGGAGAGGGTCATGAG...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTGGGTTGCTTTCTTCTaGGGATTTCACGGTACTGTC +
Preference number: 5 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFWVAFF*GFHGTV
Trigger: GACAGTACCGTGAAATCCCAAGAAGAAAGCAACCCA...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTATGGGTTGCTTTCTTCTaGGGATTTCACGGTACTGTC +
Preference number: 5 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLWVAFF*GFHGTV
Trigger: GACAGTACCGTGAAATCCCAAGAAGAAAGCAACCCA...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGGATCCAGTTTTGGGTaGCTTTCTTCTTGGGATTTC +
Preference number: 5 (lower is better)
Translates to: GPAAVIICWSVTGTERAGGSSFG*LSSWDF
Trigger: GAAATCCCAAGAAGAAAGCAACCCAAAACTGGATCC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTAGATGATTCCCTTGTCTaGCCTCAAGCTGGCAACAAT +
Preference number: 5 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLDDSLV*PQAGNN
Trigger: ATTGTTGCCAGCTTGAGGCAAGACAAGGGAATCATC...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTAGGCTACAGTTCTTCTaGTGGGTCTGCAAATGTGTG +
Preference number: 5 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFRLQFF*WVCKCV
Trigger: CACACATTTGCAGACCCACAAGAAGAACTGTAGCCT...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 90 bp ACTCAGGGAAGGGCTGAAGCAAACGCCAGGCCCCCATCTGCAGGCTaGTCAGAGTCAGTGGGTATAAAAGATGCTTTAGCATTTGGAAGA +
Preference number: 5 (lower is better)
Translates to: TQGRAEANARPPSAG*SESVGIKDALAFGR
Trigger: TCTTCCAAATGCTAAAGCATCTTTTATACCCACTGACTCTGAGCAGCCTGCAGATGGGGGCCTGGCGTTTGCTTCAGCCCTTCCCTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 90 bp ATTGCTTGGCAAGAAGAACACACTGTTTGTGACTGGCCAGTGCATTaGGGTAGTCTCCAATGGCTGTGTACACGTGGCCCAGACTGCTCA +
Preference number: 5 (lower is better)
Translates to: IAWQEEHTVCDWPVH*GSLQWLCTRGPDCS
Trigger: TGAGCAGTCTGGGCCACGTGTACACAGCCATTGGAGACTACCCCAATGCACTGGCCAGTCACAAACAGTGTGTTCTTCTTGCCAAGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 90 bp CCATCAACTCCTGTGCCAGCTCCAGGACATAGTTATGGTAAGACATaGCCTTGTCAAAGTTCCTCCGGTAGTGATAGGCACTGCCCAGGT +
Preference number: 5 (lower is better)
Translates to: PSTPVPAPGHSYGKT*PCQSSSGSDRHCPG
Trigger: ACCTGGGCAGTGCCTATCACTACCGGAGGAACTTTGACAAGGCCATGTCTTACCATAACTATGTCCTGGAGCTGGCACAGGAGTTGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTCCTATCAACAAATTCAGCTTaGCTCAGTACCGGTCCATCA +
Preference number: 5 (lower is better)
Translates to: PGLPGRQSVYPLPDLLFLSTNSA*LSTGPS
Trigger: TGATGGACCGGTACTGAGCAAAGCTGAATTTGTTGA...TAGGAAAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397906.6
CDS-3UTR CAA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCCCAGGGCTGAGCCGGTaGCTGTTGGAAGGGTTACAC +
Preference number: 5 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPPGLSR*LLEGLH
Trigger: GTGTAACCCTTCCAACAGCAACCGGCTCAGCCCTGG...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TTTATTCCCACATTACAGGAACCCTGCAGGGTAAGAAGCCATCCCCATTTCACATGCTGGCACAGGCCCTaGAGTAGTGAGACTCCACCC +
Preference number: 5 (lower is better)
Translates to: FIPTLQEPCRVRSHPHFTCWHRP*SSETPP
Trigger: GGGTGGAGTCTCACTACTCAAGGGCCTGTGCCAGCA...TGTGAAATGGGGATGGCTTCTTACCCTGCAGGGTTCCTGTAATGTGGGAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442232.1
CDS-3UTR CAA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTGCACGGAGCGGGGGCTaGGCAAACGAGCTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: SGGDFTVASRLFYHFITFARSGG*ANELCL
Trigger: GAGGCAGAGCTCGTTTGCCAAGCCCCCGCTCCGTGC...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 90 bp ATTGGCTGTGCAGACTTCCCAGCTCTCCATAGGCCTGGGCTTTATTaGAGGCCTCTCCAAGTTCATGAGCAACCACGAGCCTCTTTTCAA +
Preference number: 5 (lower is better)
Translates to: IGCADFPALHRPGLY*RPLQVHEQPRASFQ
Trigger: TTGAAAAGAGGCTCGTGGTTGCTCATGAACTTGGAGAGGCCTTCAATAAAGCCCAGGCCTATGGAGAGCTGGGAAGTCTGCACAGCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 90 bp AGCTCAGTAGAATCAAACAGAGACAGCAGGGACTGGAGCGCGAAGTaGACAGTCCGTCGATTAGCTTGCTTCCCGGTTTTCAGGATTACT +
Preference number: 5 (lower is better)
Translates to: SSVESNRDSRDWSAK*TVRRLACFPVFRIT
Trigger: AGTAATCCTGAAAACCGGGAAGCAAGCTAATCGACGGACTGTGCACTTCGCGCTCCAGTCCCTGCTGTCTCTGTTTGATTCTACTGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000480563.1
ENST00000612946.4
CDS CCA 90 bp TCAGATGCTGCTCATGGCACTGCACAGCATTCTCAAAGTCACCCATaGCAATATACACAGCTCCCATGTTGCCAAGTTCTCGGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: SDAAHGTAQHSQSHP*QYTQLPCCQVLGLQ
Trigger: CTGAAGCCCGAGAACTTGGCAACATGGGAGCTGTGTATATTGCCATGGGTGACTTTGAGAATGCTGTGCAGTGCCATGAGCAGCATCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 90 bp GCAAGGCATGATGGGTCCTTCCAAGGCTACTATATGACACCGTCTTaGCCGCCAAGTCATTCATCTGTGCAGCAATGCTCAAGTGCTGTT +
Preference number: 5 (lower is better)
Translates to: ARHDGSFQGYYMTPS*PPSHSSVQQCSSAV
Trigger: AACAGCACTTGAGCATTGCTGCACAGATGAATGACTTGGCGGCCAAGACGGTGTCATATAGTAGCCTTGGAAGGACCCATCATGCCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCGCTGCAAGCTCCCCATaGCCCTGTGTCCATTTCCCA +
Preference number: 5 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPAASSP*PCVHFP
Trigger: TGGGAAATGGACACAGGGCAATGGGGAGCTTGCAGC...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGGATCAGCAAATGCCCTaGTCCGTCCCCTTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: SPRRPKMANTAYKERECQDQQMP*SVPFLP
Trigger: TGGCAGAAAGGGGACGGACAAGGGCATTTGCTGATC...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCCTGAGCCGGTTGCTGTaGGAAGGGTTACACTGCTGC +
Preference number: 5 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPLSRLL*EGLHCC
Trigger: GCAGCAGTGTAACCCTTCCAACAGCAACCGGCTCAG...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGTGACCGAGTTGAGTTaGTTGTTCATCTCTTCAAAT +
Preference number: 5 (lower is better)
Translates to: GPAAVIICWSVTGTERAGVTELS*LFISSN
Trigger: ATTTGAAGAGATGAACAACAAACTCAACTCGGTCAC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCGCTGTGACTTTGCTGTaGGACTCCTGGGAGGAGCCA +
Preference number: 5 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPAVTLL*DSWEEP
Trigger: TGGCTCCTCCCAGGAGTCCAACAGCAAAGTCACAGC...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGGGATGCCGCCCACTTaGTTCTCCACACTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAGMPPT*FSTLCW
Trigger: CCAGCAGAGTGTGGAGAACAAAGTGGGCGGCATCCC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCGAGTTTGCAAAGGGCTaGGAGGGCAGGATTGGGCAG +
Preference number: 5 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPEFAKG*EGRIGQ
Trigger: CTGCCCAATCCTGCCCTCCAAGCCCTTTGCAAACTC...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGGATCCAGTTTTGGGTaGCTTTCTTCTTGGGATTTC +
Preference number: 5 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIGSSFG*LSSWDF
Trigger: GAAATCCCAAGAAGAAAGCAACCCAAAACTGGATCC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGAGCGTCTGCTGGACTaGAGCGAGCAGATCCAGCTG +
Preference number: 5 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAERLLD*SEQIQL
Trigger: CAGCTGGATCTGCTCGCTCAAGTCCAGCAGACGCTC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCCCCGGAAGATCTTCATaGGCCCTGTGGAATGCTGGG +
Preference number: 5 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPPGRSS*ALWNAG
Trigger: CCCAGCATTCCACAGGGCCAATGAAGATCTTCCGGG...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCGGACCCAAAAGACATTaGCAGAGCAGAGTTCAGAAT +
Preference number: 5 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIGPKRH*QSRVQN
Trigger: ATTCTGAACTCTGCTCTGCAAATGTCTTTTGGGTCC...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp GGACCGGCTGCAGTGATCATATGCTGGAGCGTCACTGGGACAGAGAGAGCAGGAGTTAAGAACCTGATTTaGCTATCTAATGCACAGTGC +
Preference number: 5 (lower is better)
Translates to: GPAAVIICWSVTGTERAGVKNLI*LSNAQC
Trigger: GCACTGTGCATTAGATAGCAAAATCAGGTTCTTAAC...TCCTGCTCTCTCTGTCCCAGTGACGCTCCAGCATATGATCACTGCAGCCGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCTATCCACTACCTGACTaGCTTTTCCTAGACTGGAGA +
Preference number: 5 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIYPLPD*LFLDWR
Trigger: TCTCCAGTCTAGGAAAAGCAAGTCAGGTAGTGGATA...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp GGCTCCTTTATTCCCACATTACAGGAACCCTGCAGGGTAAGAAGCCATCCCCATTCACTGGCTGAGAAGTaGGCAGAGCAAGAACATGTG +
Preference number: 5 (lower is better)
Translates to: GSFIPTLQEPCRVRSHPHSLAEK*AEQEHV
Trigger: CACATGTTCTTGCTCTGCCAACTTCTCAGCCAGTGA...ATGGGGATGGCTTCTTACCCTGCAGGGTTCCTGTAATGTGGGAATAAAGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442232.1
CDS TCA 90 bp GGAATAGTTCTGCAAGGCATGATGGGTCCTTCCAAGGCTACTATATaGCACCGTCTTGGCCGCCAAGTCATTCATCTGTGCAGCAATGCT +
Preference number: 5 (lower is better)
Translates to: GIVLQGMMGPSKATI*HRLGRQVIHLCSNA
Trigger: AGCATTGCTGCACAGATGAATGACTTGGCGGCCAAGACGGTGTCATATAGTAGCCTTGGAAGGACCCATCATGCCTTGCAGAACTATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 90 bp GTCCGTCGATTAGCTTGCTTCCCGGTTTTCAGGATTACTTCCTCCTaGCCAACTTCACAGAGATCAAAACCTAGAGCTGCCAGGAACTCG +
Preference number: 5 (lower is better)
Translates to: VRRLACFPVFRITSS*PTSQRSKPRAARNS
Trigger: CGAGTTCCTGGCAGCTCTAGGTTTTGATCTCTGTGAAGTTGGTCAGGAGGAAGTAATCCTGAAAACCGGGAAGCAAGCTAATCGACGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000480563.1
ENST00000612946.4
CDS GCA 90 bp CACCTAAGGTCTTGGCTACATCCAAGTCCTGCTGCATATATCCGGTaGTCTTCTCTGTATTTCCAAGAGACCAGTAAGCACTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: HLRSWLHPSPAAYIR*SSLYFQETSKHCSG
Trigger: CCCTGAGCAGTGCTTACTGGTCTCTTGGAAATACAGAGAAGAGCACCGGATATATGCAGCAGGACTTGGATGTAGCCAAGACCTTAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397906.6
ENST00000490475.1
ENST00000612946.4
CDS GCA 90 bp TCCAGCATAGGCCCGCATCTCAATAGCCTTCTCCATCAACTCCTGTaGCAGCTCCAGGACATAGTTATGGTAAGACATGGCCTTGTCAAA +
Preference number: 5 (lower is better)
Translates to: SSIGPHLNSLLHQLL*QLQDIVMVRHGLVK
Trigger: TTTGACAAGGCCATGTCTTACCATAACTATGTCCTGGAGCTGGCACAGGAGTTGATGGAGAAGGCTATTGAGATGCGGGCCTATGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 90 bp GGTAGGATGATGTCTGCAGGTCAAAGAGGGAGAGTTTGTAGTCCGTaGTCAGCTGTGCCTCATGTCGGATTGTTTCAAACAAGGCTGATG +
Preference number: 5 (lower is better)
Translates to: GRMMSAGQRGRVCSP*SAVPHVGLFQTRLM
Trigger: CATCAGCCTTGTTTGAAACAATCCGACATGAGGCACAGCTGAGCACGGACTACAAACTCTCCCTCTTTGACCTGCAGACATCATCCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 90 bp GTGGGGTCAGTGACCGAGTTGAGTTTGTTGTTCATCTCTTCAAATTaGTGGTCCATGATGTCTCCCGCTTCACTCTCTGTCTCACTGCTG +
Preference number: 5 (lower is better)
Translates to: VGSVTELSLLFISSN*WSMMSPASLSVSLL
Trigger: CAGCAGTGAGACAGAGAGTGAAGCGGGAGACATCATGGACCAGCAATTTGAAGAGATGAACAACAAACTCAACTCGGTCACTGACCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397906.6
ENST00000442232.1
ENST00000612946.4
CDS CCA 90 bp GTTCATCTTTGGATTGCTTGGCAAGAAGAACACACTGTTTGTGACTaGCCAGTGCATTGGGGTAGTCTCCAATGGCTGTGTACACGTGGC +
Preference number: 5 (lower is better)
Translates to: VHLWIAWQEEHTVCD*PVHWGSLQWLCTRG
Trigger: GCCACGTGTACACAGCCATTGGAGACTACCCCAATGCACTGGCCAGTCACAAACAGTGTGTTCTTCTTGCCAAGCAATCCAAAGATGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 90 bp TCTCGCTTGTTCCCCAGGTCCTTGGCTATCTTCAGATGCTGCTCATaGCACTGCACAGCATTCTCAAAGTCACCCATGGCAATATACACA +
Preference number: 5 (lower is better)
Translates to: SRLFPRSLAIFRCCS*HCTAFSKSPMAIYT
Trigger: TGTGTATATTGCCATGGGTGACTTTGAGAATGCTGTGCAGTGCCATGAGCAGCATCTGAAGATAGCCAAGGACCTGGGGAACAAGCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 90 bp ACTTCTGGATCATTCGGTATGCAGTGCCCAGGGCTGCATATGCACTaGCTTCTAATCTTCTGTCCTTTACCTGGTGAGCTAAGCCCAGTT +
Preference number: 5 (lower is better)
Translates to: TSGSFGMQCPGLHMH*LLIFCPLPGELSPV
Trigger: AACTGGGCTTAGCTCACCAGGTAAAGGACAGAAGATTAGAAGCCAGTGCATATGCAGCCCTGGGCACTGCATACCGAATGATCCAGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 90 bp GGGTCAGTGACCGAGTTGAGTTTGTTGTTCATCTCTTCAAATTGCTaGTCCATGATGTCTCCCGCTTCACTCTCTGTCTCACTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: GSVTELSLLFISSNC*SMMSPASLSVSLLA
Trigger: TGCCAGCAGTGAGACAGAGAGTGAAGCGGGAGACATCATGGACCAGCAATTTGAAGAGATGAACAACAAACTCAACTCGGTCACTGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397906.6
ENST00000442232.1
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGACAGAACCTCTCAGTTaGAGGCTGCAGGTGCCAATC +
Preference number: 5 (lower is better)
Translates to: SPRRPKMANTAYKERECQTEPLS*RLQVPI
Trigger: GATTGGCACCTGCAGCCTCAAACTGAGAGGTTCTGT...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGTGGTCACCTAAGGTCTaGGCTACATCCAAGTCCTGC +
Preference number: 5 (lower is better)
Translates to: SPRRPKMANTAYKERECQWSPKV*ATSKSC
Trigger: GCAGGACTTGGATGTAGCCAAGACCTTAGGTGACCA...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGCCCTGGCACGTGGGGTaGTTGGTTTCCTCTGCTATC +
Preference number: 5 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAPWHVG*LVSSAI
Trigger: GATAGCAGAGGAAACCAACAACCCCACGTGCCAGGG...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCGGGTGCGAGAAGGCCTaGCTGCTCTGCACCACCTTC +
Preference number: 5 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAGCEKA*LLCTTF
Trigger: GAAGGTGGTGCAGAGCAGCAAGGCCTTCTCGCACCC...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTATGAACCCTGCCCAGTaGGAGGGGTGCGAGAAGGCC +
Preference number: 5 (lower is better)
Translates to: SGGDFTVASRLFYHFITFMNPAQ*EGCEKA
Trigger: GGCCTTCTCGCACCCCTCCAACTGGGCAGGGTTCAT...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGTCAAGGCTGAGGCGCTaGGGTAGCTCAGTAGAATCA +
Preference number: 5 (lower is better)
Translates to: SPRRPKMANTAYKERECQSRLRR*GSSVES
Trigger: TGATTCTACTGAGCTACCCAAGCGCCTCAGCCTTGA...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGTGCTGATGCTCCCTTaGGAGCTCACCGAGACTCTC +
Preference number: 5 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAVLMLP*ELTETL
Trigger: GAGAGTCTCGGTGAGCTCCAAAGGGAGCATCAGCAC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGCTGAGGACATCCCTTTaGGAAGTCATCGTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: SPRRPKMANTAYKERECQLRTSL*EVIVPG
Trigger: TCCTGGCACGATGACTTCCAAAAGGGATGTCCTCAG...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CCTCCCAAGTGGGACAAAGAGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCAAAATTCAAGTTTGGTaGACAGCGGGACCCAAAAGA +
Preference number: 5 (lower is better)
Translates to: PPKWDKEPRAMQEAFASIKIQVW*TAGPKR
Trigger: TCTTTTGGGTCCCGCTGTCAACCAAACTTGAATTTT...GATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCTCTTTGTCCCACTTGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTAAGACATGCTTATTGTaGGCTTTTGTCAACATGGCT +
Preference number: 5 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFKTCLL*AFVNMA
Trigger: AGCCATGTTGACAAAAGCCAACAATAAGCATGTCTT...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGCCAAGGGCTATGCAGGAGGCATTTGCTTCCATCCACGTGGCCCTCACATACCAAGACATGCTTATTGTaGGCTTTTGTCAACATGGCT +
Preference number: 5 (lower is better)
Translates to: SQGLCRRHLLPSTWPSHTKTCLL*AFVNMA
Trigger: AGCCATGTTGACAAAAGCCAACAATAAGCATGTCTT...GGTATGTGAGGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAGCCCTTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTAAACCACATAAACCATaGGCTCTTCAGTATGAAACC +
Preference number: 5 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFKPHKP*ALQYET
Trigger: GGTTTCATACTGAAGAGCCAATGGTTTATGTGGTTT...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 90 bp CATTCTCCTGTCTGGTCACCTAAGGTCTTGGCTACATCCAAGTCCTaGTGCATATATCCGGTGCTCTTCTCTGTATTTCCAAGAGACCAG +
Preference number: 5 (lower is better)
Translates to: HSPVWSPKVLATSKS*CIYPVLFSVFPRDQ
Trigger: CTGGTCTCTTGGAAATACAGAGAAGAGCACCGGATATATGCAGCAGGACTTGGATGTAGCCAAGACCTTAGGTGACCAGACAGGAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397906.6
ENST00000490475.1
ENST00000612946.4
CDS GCA 90 bp GTAGGCTTTTGCTTGGCTCAACTTGTCGTGAAGGTCTTTAGCCAGTaGCAGATCCTGTTCGTAGTACTTCACTGCCTCCTGATAGTTTCC +
Preference number: 5 (lower is better)
Translates to: VGFCLAQLVVKVFSQ*QILFVVLHCLLIVS
Trigger: GGAAACTATCAGGAGGCAGTGAAGTACTACGAACAGGATCTGGCACTGGCTAAAGACCTTCACGACAAGTTGAGCCAAGCAAAAGCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 90 bp GATAACCCAGGGCCTTGTCATACTTCTGGATCATTCGGTATGCAGTaGCCAGGGCTGCATATGCACTGGCTTCTAATCTTCTGTCCTTTA +
Preference number: 5 (lower is better)
Translates to: DNPGPCHTSGSFGMQ*PGLHMHWLLIFCPL
Trigger: TAAAGGACAGAAGATTAGAAGCCAGTGCATATGCAGCCCTGGGCACTGCATACCGAATGATCCAGAAGTATGACAAGGCCCTGGGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCGTGGTTCTGATAGTGTaGCAGGGCCCGGTCATGGGC +
Preference number: 5 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAVVLIV*QGPVMG
Trigger: GCCCATGACCGGGCCCTGCAACACTATCAGAACCAC...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGTTCTCCTTCCATGTCTaGAAGGTCGGGAGCAAGCCG +
Preference number: 5 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAFSFHV*KVGSKP
Trigger: CGGCTTGCTCCCGACCTTCAAGACATGGAAGGAGAA...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCGCTCAAGTGCTGTTCTaGATAGACCACAGCCCTCTC +
Preference number: 5 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPAQVLF*IDHSPL
Trigger: GAGAGGGCTGTGGTCTATCAAGAACAGCACTTGAGC...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TTACAGGAACCCTGCAGGGTAAGAAGCCATCCCCATTTCACAGATGACGAGACTGGGTCAGTGACCGAGTaGAGTTTGTTGTTCATCTCT +
Preference number: 5 (lower is better)
Translates to: LQEPCRVRSHPHFTDDETGSVTE*SLLFIS
Trigger: AGAGATGAACAACAAACTCAACTCGGTCACTGACCC...AGTCTCGTCATCTGTGAAATGGGGATGGCTTCTTACCCTGCAGGGTTCCTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442232.1
CDS-3UTR CAA 90 bp CTCCTTTATTCCCACATTACAGGAACCCTGCAGGGTAAGAAGCCATCCCCATTTCTGTTAAACAGGTTATaGCGGCGAACCATCCGCAGA +
Preference number: 5 (lower is better)
Translates to: LLYSHITGTLQGKKPSPFLLNRL*RRTIRR
Trigger: TCTGCGGATGGTTCGCCGCAATAACCTGTTTAACAG...AAATGGGGATGGCTTCTTACCCTGCAGGGTTCCTGTAATGTGGGAATAAAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442232.1
CDS-3UTR CAA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTCTCATGACCCTCTCCTaGGTGGCCACACTGCCCACT +
Preference number: 5 (lower is better)
Translates to: SGGDFTVASRLFYHFITFLMTLS*VATLPT
Trigger: AGTGGGCAGTGTGGCCACCAAGGAGAGGGTCATGAG...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTCCGTCGGCTGTGACTTaGCTGTTGGACTCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: SGGDFTVASRLFYHFITFPSAVT*LLDSWE
Trigger: CTCCCAGGAGTCCAACAGCAAAGTCACAGCCGACGG...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGTGGAGACAAAGCTCATaGAGGAGGCAATGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: SPRRPKMANTAYKERECQWRQSS*RRQWSS
Trigger: TGAGCTCCATTGCCTCCTCAATGAGCTTTGTCTCCA...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTACTGGTGGCCGGAGCTaGGGGACATGTTCCTTGGTG +
Preference number: 5 (lower is better)
Translates to: SGGDFTVASRLFYHFITFTGGRS*GTCSLV
Trigger: CACCAAGGAACATGTCCCCAAGCTCCGGCCACCAGT...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGGCTGCCATTTTCAGTTaGTCTATGTCGGGAGCGTCT +
Preference number: 5 (lower is better)
Translates to: SPRRPKMANTAYKERECQAAIFS*SMSGAS
Trigger: AGACGCTCCCGACATAGACAAACTGAAAATGGCAGC...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp CATACCCTGGGCTCCCCGGACGCCAGTCAGTCTATCCACTACCTGACTTGCTTTTTGTCAACATGGCTGTaGGTTAAATTAAAAACCCCT +
Preference number: 5 (lower is better)
Translates to: HTLGSPDASQSIHYLTCFLSTWL*VKLKTP
Trigger: AGGGGTTTTTAATTTAACCAACAGCCATGTTGACAA...AAAGCAAGTCAGGTAGTGGATAGACTGACTGGCGTCCGGGGAGCCCAGGGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 90 bp CAAAGTAGCCAATGGCTTCTTCCATCACATTCATGTTCATCTTTGTaGTGCCCATGTTGCCATAGACCTGGGCTTCCAGACTCGGATCCT +
Preference number: 5 (lower is better)
Translates to: QSSQWLLPSHSCSSL*CPCCHRPGLPDSDP
Trigger: AGGATCCGAGTCTGGAAGCCCAGGTCTATGGCAACATGGGCATCACAAAGATGAACATGAATGTGATGGAAGAAGCCATTGGCTACTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 90 bp GTGAAGGTCTTTAGCCAGTGCCAGATCCTGTTCGTAGTACTTCACTaGCTCCTGATAGTTTCCAAGGCAGTAATGGGCATAGCCAAGATT +
Preference number: 5 (lower is better)
Translates to: VKVFSQCQILFVVLH*LLIVSKAVMGIAKI
Trigger: AATCTTGGCTATGCCCATTACTGCCTTGGAAACTATCAGGAGGCAGTGAAGTACTACGAACAGGATCTGGCACTGGCTAAAGACCTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCCCCTGGCACGTGGGGTaGTTGGTTTCCTCTGCTATC +
Preference number: 5 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAPWHVG*LVSSAI
Trigger: GATAGCAGAGGAAACCAACAACCCCACGTGCCAGGG...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCCTATATGACACCGTCTaGGCCGCCAAGTCATTCATC +
Preference number: 5 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPLYDTV*AAKSFI
Trigger: GATGAATGACTTGGCGGCCAAGACGGTGTCATATAG...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGGCCATGGCGAATTTTaGCCTCATCTTCTCTTCGGC +
Preference number: 5 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAGHGEF*PHLLFG
Trigger: GCCGAAGAGAAGATGAGGCAAAAATTCGCCATGGCC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGATGTGTACATGGCATaGCGCTGCCCATTCTGGATG +
Preference number: 5 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYADVYMA*RCPFWM
Trigger: CATCCAGAATGGGCAGCGCAATGCCATGTACACATC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCAGTCCGTCGATTAGCTaGCTTCCCGGTTTTCAGGAT +
Preference number: 5 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPSPSIS*LPGFQD
Trigger: ATCCTGAAAACCGGGAAGCAAGCTAATCGACGGACT...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCCCCTCCTCCTTCTTATaGTGCCGTGGTGACAAATTC +
Preference number: 5 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPPSSFL*CRGDKF
Trigger: GAATTTGTCACCACGGCACAATAAGAAGGAGGAGGG...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGGATGATTCCCTTGTCTaGCCTCAAGCTGGCAACAAT +
Preference number: 5 (lower is better)
Translates to: SPRRPKMANTAYKERECQDDSLV*PQAGNN
Trigger: ATTGTTGCCAGCTTGAGGCAAGACAAGGGAATCATC...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTCTATGCAGGAGGCATTaGCTTCCATCCACGTGGCCC +
Preference number: 5 (lower is better)
Translates to: SGGDFTVASRLFYHFITFLCRRH*LPSTWP
Trigger: GGGCCACGTGGATGGAAGCAAATGCCTCCTGCATAG...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 90 bp GATCCTTCAGCTTTTGCCCTAGATCCAGTTGCTCTTCATAACACTTaGATGCCATTGTGTATTTCCCAAGGGCCATGTAGACAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: DPSAFALDPVALHNT*MPLCISQGPCRQQP
Trigger: TGGCTGCTGTCTACATGGCCCTTGGGAAATACACAATGGCATTCAAGTGTTATGAAGAGCAACTGGATCTAGGGCAAAAGCTGAAGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 90 bp CAGTTCAAGCTTATCCACTCCCTCCTCCTTCTTATTGTGCCGTGGTaGCAAATTCAACAGACTGAGGACATCCCTTTTGGAAGTCATCGT +
Preference number: 5 (lower is better)
Translates to: QFKLIHSLLLLIVPW*QIQQTEDIPFGSHR
Trigger: ACGATGACTTCCAAAAGGGATGTCCTCAGTCTGTTGAATTTGTCACCACGGCACAATAAGAAGGAGGAGGGAGTGGATAAGCTTGAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 90 bp AGCTCCTTCAGTTCAAGCTTATCCACTCCCTCCTCCTTCTTATTGTaGCGTGGTGACAAATTCAACAGACTGAGGACATCCCTTTTGGAA +
Preference number: 5 (lower is better)
Translates to: SSFSSSLSTPSSFLL*RGDKFNRLRTSLLE
Trigger: TTCCAAAAGGGATGTCCTCAGTCTGTTGAATTTGTCACCACGGCACAATAAGAAGGAGGAGGGAGTGGATAAGCTTGAACTGAAGGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 90 bp TTCTGGGCTAACTCTTGTGGATCCAGTTTTGGGTTGCTTTCTTCTTaGGATTTCACGGTACTGTCCGTTTCTGTGCTAGACTGGTCTGAT +
Preference number: 5 (lower is better)
Translates to: FWANSCGSSFGLLSS*DFTVLSVSVLDWSD
Trigger: ATCAGACCAGTCTAGCACAGAAACGGACAGTACCGTGAAATCCCAAGAAGAAAGCAACCCAAAACTGGATCCACAAGAGTTAGCCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTTCCTGCCGATGGTATTaGACCGCCTGGTCGTACATG +
Preference number: 5 (lower is better)
Translates to: SGGDFTVASRLFYHFITFSCRWY*TAWSYM
Trigger: CATGTACGACCAGGCGGTCAAATACCATCGGCAGGA...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCAAATTCAGCAGAGCCTaGAATGCTAGGCCCAAGTTG +
Preference number: 5 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPKFSRA*NARPKL
Trigger: CAACTTGGGCCTAGCATTCAAGGCTCTGCTGAATTT...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTCCGGTAAGCCTTGGCTaGGTCTTGCATGCGATTCAG +
Preference number: 5 (lower is better)
Translates to: SGGDFTVASRLFYHFITFPVSLG*VLHAIQ
Trigger: CTGAATCGCATGCAAGACCAAGCCAAGGCTTACCGG...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TGGCTCCTTTATTCCCACATTACAGGAACCCTGCAGGGTAAGAAGCCATCCCCAACCGAGTTGAGTTTGTaGTTCATCTCTTCAAATTGC +
Preference number: 5 (lower is better)
Translates to: WLLYSHITGTLQGKKPSPTELSL*FISSNC
Trigger: GCAATTTGAAGAGATGAACAACAAACTCAACTCGGT...TGGGGATGGCTTCTTACCCTGCAGGGTTCCTGTAATGTGGGAATAAAGGAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442232.1
CDS-3UTR CAA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCGGGTCAGTGACCGAGTaGAGTTTGTTGTTCATCTCT +
Preference number: 5 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPGSVTE*SLLFIS
Trigger: AGAGATGAACAACAAACTCAACTCGGTCACTGACCC...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGCTGTTAAACAGGTTATaGCGGCGAACCATCCGCAGA +
Preference number: 5 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYALLNRL*RRTIRR
Trigger: TCTGCGGATGGTTCGCCGCAATAACCTGTTTAACAG...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGTATTCTTCTTCATCTTaGTTGCCTGCAGGGCGGGTC +
Preference number: 5 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAYSSSS*LPAGRV
Trigger: GACCCGCCCTGCAGGCAACAAAGATGAAGAAGAATA...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTTGGCTCGGGCTGTCTTaGATGGACATCTCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: SGGDFTVASRLFYHFITFWLGLS*MDISEV
Trigger: CACCTCAGAGATGTCCATCAAAGACAGCCCGAGCCA...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGGAGGAACAGGTGAGATaGTCAGTGTATGCGCAGAAG +
Preference number: 5 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAEEQVR*SVYAQK
Trigger: CTTCTGCGCATACACTGACAATCTCACCTGTTCCTC...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 90 bp TGGCCACTTGGGATTGAGAAGTCGAGCTTTGATTGCATCATCCAGTaGCTTGTCATACTGCTGGATTTTCATGTAGGCTGCAGATCTATT +
Preference number: 5 (lower is better)
Translates to: WPLGIEKSSFDCIIQ*LVILLDFHVGCRSI
Trigger: AATAGATCTGCAGCCTACATGAAAATCCAGCAGTATGACAAGGCACTGGATGATGCAATCAAAGCTCGACTTCTCAATCCCAAGTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000468807.1
CDS CCA 90 bp CTTTCTTCTTGGGATTTCACGGTACTGTCCGTTTCTGTGCTAGACTaGTCTGATTCTCCTGTATCTGAGCTTGCTAGTTTTCCCACCTTT +
Preference number: 5 (lower is better)
Translates to: LSSWDFTVLSVSVLD*SDSPVSELASFPTF
Trigger: AAAGGTGGGAAAACTAGCAAGCTCAGATACAGGAGAATCAGACCAGTCTAGCACAGAAACGGACAGTACCGTGAAATCCCAAGAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTATGCACAGGTGGGTCTaGTGGAGTTTCAGTGCAGTG +
Preference number: 5 (lower is better)
Translates to: SGGDFTVASRLFYHFITFMHRWV*WSFSAV
Trigger: CACTGCACTGAAACTCCACAAGACCCACCTGTGCAT...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTAGCCTTGGCTTGGTCTaGCATGCGATTCAGACTCTG +
Preference number: 5 (lower is better)
Translates to: SGGDFTVASRLFYHFITFSLGLV*HAIQTL
Trigger: CAGAGTCTGAATCGCATGCAAGACCAAGCCAAGGCT...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTTGGCACGTGGGGTTGTaGGTTTCCTCTGCTATCTGT +
Preference number: 5 (lower is better)
Translates to: SGGDFTVASRLFYHFITFWHVGL*VSSAIC
Trigger: ACAGATAGCAGAGGAAACCAACAACCCCACGTGCCA...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCTGGCACGTGGGGTTGTaGGTTTCCTCTGCTATCTGT +
Preference number: 5 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAWHVGL*VSSAIC
Trigger: ACAGATAGCAGAGGAAACCAACAACCCCACGTGCCA...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCCCTATAAAGCTGGTGTaGGGCCTCCTCCAAGTTTCC +
Preference number: 5 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAPIKLV*GLLQVS
Trigger: GGAAACTTGGAGGAGGCCCAACACCAGCTTTATAGG...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTGTAGGGGTCGGAGTCTaGTTGTCCTGTTTGTCGTTC +
Preference number: 5 (lower is better)
Translates to: SGGDFTVASRLFYHFITFVGVGV*LSCLSF
Trigger: GAACGACAAACAGGACAACAAGACTCCGACCCCTAC...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCGTAGGGGTCGGAGTCTaGTTGTCCTGTTTGTCGTTC +
Preference number: 5 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAVGVGV*LSCLSF
Trigger: GAACGACAAACAGGACAACAAGACTCCGACCCCTAC...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGTGCTGGCACAGGCCCTaGAGTAGTGAGACTCCACCC +
Preference number: 5 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMCWHRP*SSETPP
Trigger: GGGTGGAGTCTCACTACTCAAGGGCCTGTGCCAGCA...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTCCAGGTTGGGGTTGTTaGTGGTCTGGTGAGAAGCAT +
Preference number: 5 (lower is better)
Translates to: SGGDFTVASRLFYHFITFPGWGC*WSGEKH
Trigger: ATGCTTCTCACCAGACCACAAACAACCCCAACCTGG...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGCTTGTGGATCCAGTTTaGGGTTGCTTTCTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYALVDPV*GCFLLG
Trigger: CCCAAGAAGAAAGCAACCCAAAACTGGATCCACAAG...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGGCTTATTGTTGGCTTTaGTCAACATGGCTGTTGGTT +
Preference number: 5 (lower is better)
Translates to: SPRRPKMANTAYKERECQAYCWL*STWLLV
Trigger: AACCAACAGCCATGTTGACAAAAGCCAACAATAAGC...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGTCAGAAAGTTCATCTTaGGATTGCTTGGCAAGAAGA +
Preference number: 5 (lower is better)
Translates to: SPRRPKMANTAYKERECQSESSS*DCLARR
Trigger: TCTTCTTGCCAAGCAATCCAAAGATGAACTTTCTGA...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGCTGCTGCTCATGGTATaGTTTAGCTCTCTCCAAATC +
Preference number: 5 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYALLLMV*FSSLQI
Trigger: GATTTGGAGAGAGCTAAACAATACCATGAGCAGCAG...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCGCAGTAGGCTTTTGCTaGGCTCAACTTGTCGTGAAG +
Preference number: 5 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAAVGFC*AQLVVK
Trigger: CTTCACGACAAGTTGAGCCAAGCAAAAGCCTACTGC...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTCTGCAGCATGGCCAATaGCTGCTCAAAGTAGCCAAT +
Preference number: 5 (lower is better)
Translates to: SGGDFTVASRLFYHFITFLQHGQ*LLKVAN
Trigger: ATTGGCTACTTTGAGCAGCAATTGGCCATGCTGCAG...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGGCTGCAAGCTCCCCATaGCCCTGTGTCCATTTCCCA +
Preference number: 5 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMAASSP*PCVHFP
Trigger: TGGGAAATGGACACAGGGCAATGGGGAGCTTGCAGC...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTCCACGTAGGCCAAAGATGGCTAACACTGCATATAAGGAACGTGAATGCCAGGTGACCGAGTTGAGTTaGTTGTTCATCTCTTCAAAT +
Preference number: 5 (lower is better)
Translates to: SPRRPKMANTAYKERECQVTELS*LFISSN
Trigger: ATTTGAAGAGATGAACAACAAACTCAACTCGGTCAC...CTGGCATTCACGTTCCTTATATGCAGTGTTAGCCATCTTTGGCCTACGTGGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTCAGAAGTCCTGGCTTTaGGTGAATGTGGCCCAGAAA +
Preference number: 5 (lower is better)
Translates to: SGGDFTVASRLFYHFITFQKSWL*VNVAQK
Trigger: TTTCTGGGCCACATTCACCAAAAGCCAGGACTTCTG...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGTATCCACTACCTGACTaGCTTTTCCTAGACTGGAGA +
Preference number: 5 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAYPLPD*LFLDWR
Trigger: TCTCCAGTCTAGGAAAAGCAAGTCAGGTAGTGGATA...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 90 bp ACTGCTGGATTTTCATGTAGGCTGCAGATCTATTGCTGTATAAGATaGAGTTCTGAGGGTCAACAGCCAGGGCTTCATTATACAGAACAA +
Preference number: 5 (lower is better)
Translates to: TAGFSCRLQIYCCIR*SSEGQQPGLHYTEQ
Trigger: TTGTTCTGTATAATGAAGCCCTGGCTGTTGACCCTCAGAACTGCATCTTATACAGCAATAGATCTGCAGCCTACATGAAAATCCAGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000468807.1
CDS-3UTR CAA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGTCATCTTTGGATTGCTaGGCAAGAAGAACACACTGT +
Preference number: 5 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYASSLDC*ARRTHC
Trigger: ACAGTGTGTTCTTCTTGCCAAGCAATCCAAAGATGA...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TTTTTAAGATACATCTCTCTCTTCCCGGTTGGCCATAATCCAGGCATACGTCCCAAGTTCATCTTTGGATaGCTTGGCAAGAAGAACACA +
Preference number: 5 (lower is better)
Translates to: FLRYISLFPVGHNPGIRPKFIFG*LGKKNT
Trigger: TGTGTTCTTCTTGCCAAGCAATCCAAAGATGAACTT...GGGACGTATGCCTGGATTATGGCCAACCGGGAAGAGAGAGATGTATCTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCAAATTCAGCAGAGCCTaGAATGCTAGGCCCAAGTTG +
Preference number: 5 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAKFSRA*NARPKL
Trigger: CAACTTGGGCCTAGCATTCAAGGCTCTGCTGAATTT...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGAAAGCACACAAGGGCTaGCTGCAAGCTCCCCATTGC +
Preference number: 5 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMKAHKG*LQAPHC
Trigger: GCAATGGGGAGCTTGCAGCAAGCCCTTGTGTGCTTT...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTGTGCCTCATGTCGGATaGTTTCAAACAAGGCTGATG +
Preference number: 5 (lower is better)
Translates to: SGGDFTVASRLFYHFITFVPHVG*FQTRLM
Trigger: CATCAGCCTTGTTTGAAACAATCCGACATGAGGCAC...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGGATCAGCAAATGCCCTaGTCCGTCCCCTTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMDQQMP*SVPFLP
Trigger: TGGCAGAAAGGGGACGGACAAGGGCATTTGCTGATC...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGGGGGTCGGAGTCTTGTaGTCCTGTTTGTCGTTCCAC +
Preference number: 5 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMGVGVL*SCLSFH
Trigger: GTGGAACGACAAACAGGACAACAAGACTCCGACCCC...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TTTATTCCCACATTACAGGAACCCTGCAGGGTAAGAAGCCATCCCCATTTCACAGTGACCGAGTTGAGTTaGTTGTTCATCTCTTCAAAT +
Preference number: 5 (lower is better)
Translates to: FIPTLQEPCRVRSHPHFTVTELS*LFISSN
Trigger: ATTTGAAGAGATGAACAACAAACTCAACTCGGTCAC...TGTGAAATGGGGATGGCTTCTTACCCTGCAGGGTTCCTGTAATGTGGGAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442232.1
CDS-3UTR CAA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGGAGGCAGTGATGAGTTaGCAAAGGGCTTGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMEAVMS*QRAWRA
Trigger: TGCCCTCCAAGCCCTTTGCAAACTCATCACTGCCTC...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGGCGTGGGTGACACCTTaGTCTCCTGCTAAAACCCAG +
Preference number: 5 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMAWVTP*SPAKTQ
Trigger: CTGGGTTTTAGCAGGAGACAAAGGTGTCACCCACGC...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGTGGTCACCTAAGGTCTaGGCTACATCCAAGTCCTGC +
Preference number: 5 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMWSPKV*ATSKSC
Trigger: GCAGGACTTGGATGTAGCCAAGACCTTAGGTGACCA...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGTACACAGCTCCCATGTaGCCAAGTTCTCGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMYTAPM*PSSRAS
Trigger: TGAAGCCCGAGAACTTGGCAACATGGGAGCTGTGTA...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCCTGCTGCTCATGGTATaGTTTAGCTCTCTCCAAATC +
Preference number: 5 (lower is better)
Translates to: NCFVNITSMDSSQVGQRALLLMV*FSSLQI
Trigger: GATTTGGAGAGAGCTAAACAATACCATGAGCAGCAG...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCCTCCTGTATCTGAGCTaGCTAGTTTTCCCACCTTTT +
Preference number: 5 (lower is better)
Translates to: NCFVNITSMDSSQVGQRALLYLS*LVFPPF
Trigger: AAAAGGTGGGAAAACTAGCAAGCTCAGATACAGGAG...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTCTCCTGTATCTGAGCTaGCTAGTTTTCCCACCTTTT +
Preference number: 5 (lower is better)
Translates to: SGGDFTVASRLFYHFITFLLYLS*LVFPPF
Trigger: AAAAGGTGGGAAAACTAGCAAGCTCAGATACAGGAG...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTTTGGGGACATGTTCCTaGGTGATTTGGAAATGTGAG +
Preference number: 5 (lower is better)
Translates to: SGGDFTVASRLFYHFITFLGTCS*VIWKCE
Trigger: CTCACATTTCCAAATCACCAAGGAACATGTCCCCAA...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AATTGTTTTGTAAATATTACATCCATGGACTCCTCCCAAGTGGGACAAAGAGCCGGACCCAAAAGACATTaGCAGAGCAGAGTTCAGAAT +
Preference number: 5 (lower is better)
Translates to: NCFVNITSMDSSQVGQRAGPKRH*QSRVQN
Trigger: ATTCTGAACTCTGCTCTGCAAATGTCTTTTGGGTCC...GGCTCTTTGTCCCACTTGGGAGGAGTCCATGGATGTAATATTTACAAAACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGAAACCACATAAACCATaGGCTCTTCAGTATGAAACC +
Preference number: 5 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYAKPHKP*ALQYET
Trigger: GGTTTCATACTGAAGAGCCAATGGTTTATGTGGTTT...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTTCATCTTTGGATTGCTaGGCAAGAAGAACACACTGT +
Preference number: 5 (lower is better)
Translates to: SGGDFTVASRLFYHFITFSSLDC*ARRTHC
Trigger: ACAGTGTGTTCTTCTTGCCAAGCAATCCAAAGATGA...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGTGTATGATTCCTAGATaGGAGGATGCTCGCCCCTCT +
Preference number: 5 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMCMIPR*EDARPS
Trigger: AGAGGGGCGAGCATCCTCCAATCTAGGAATCATACA...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGCAGCAAAAGGCCCTGTaGCTTAGGATCTGTACGTGT +
Preference number: 5 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMQQKAL*LRICTC
Trigger: ACACGTACAGATCCTAAGCAACAGGGCCTTTTGCTG...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TTCTTCTTTTCAGAGGAGTACACTGAGGAACAGGTGAGATTGTCAGTGTATGCGTTGTCAACATGGCTGTaGGTTAAATTAAAAACCCCT +
Preference number: 5 (lower is better)
Translates to: FFFSEEYTEEQVRLSVYALSTWL*VKLKTP
Trigger: AGGGGTTTTTAATTTAACCAACAGCCATGTTGACAA...CGCATACACTGACAATCTCACCTGTTCCTCAGTGTACTCCTCTGAAAAGAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGTGGCCTGGAAGTCACTaGAGTTTTCCACTGTGTTCT +
Preference number: 5 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMWPGSH*SFPLCS
Trigger: AGAACACAGTGGAAAACTCAAGTGACTTCCAGGCCA...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGCTTGTGGATCCAGTTTaGGGTTGCTTTCTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMLVDPV*GCFLLG
Trigger: CCCAAGAAGAAAGCAACCCAAAACTGGATCCACAAG...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp AGTGGCGGTGACTTTACAGTGGCCTCTAGACTGTTCTATCATTTTATCACTTTTCACAGTGCTATAAATTaGGTCTTCACTTGCTACACT +
Preference number: 5 (lower is better)
Translates to: SGGDFTVASRLFYHFITFHSAIN*VFTCYT
Trigger: AGTGTAGCAAGTGAAGACCAAATTTATAGCACTGTG...AAAAGTGATAAAATGATAGAACAGTCTAGAGGCCACTGTAAAGTCACCGCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGAAGTTCATCTTTGGATaGCTTGGCAAGAAGAACACA +
Preference number: 5 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMKFIFG*LGKKNT
Trigger: TGTGTTCTTCTTGCCAAGCAATCCAAAGATGAACTT...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGTCAGAAAGTTCATCTTaGGATTGCTTGGCAAGAAGA +
Preference number: 5 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMSESSS*DCLARR
Trigger: TCTTCTTGCCAAGCAATCCAAAGATGAACTTTCTGA...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS-3UTR CAA 90 bp TATACAGTTTTCACTTGTTGCCTACTTACTGAAAGCAAACCAGATTATTGCATGACCGAGTTGAGTTTGTaGTTCATCTCTTCAAATTGC +
Preference number: 5 (lower is better)
Translates to: YTVFTCCLLTESKPDYCMTELSL*FISSNC
Trigger: GCAATTTGAAGAGATGAACAACAAACTCAACTCGGT...CATGCAATAATCTGGTTTGCTTTCAGTAAGTAGGCAACAAGTGAAAACTGTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp CGGGCAGCGGCAGTGAGCCCAGCGAGGTGGTCTCGGTaGGCCAGTGTCCGTTGGGAGGGGCTTTCGGTGGAG +
Preference number: 6 (lower is better)
Translates to: RAAAVSPARWSR*ASVRWEGLSVE
Trigger: CTCCACCGAAAGCCCCTCCCAACGGACACTGGCGCACCGAGACCACCTCGCTGGGCTCACTGCCGCTGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp GCCCAGTTGGAGGGGTGCGAGAAGGCCTTGCTGCTCTaGACCACCTTCATGGCCTCCCCCAGGGCGGCGCTG +
Preference number: 6 (lower is better)
Translates to: AQLEGCEKALLL*TTFMASPRAAL
Trigger: CAGCGCCGCCCTGGGGGAGGCCATGAAGGTGGTGCAGAGCAGCAAGGCCTTCTCGCACCCCTCCAACTGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp AGCAGCACTCGCAGGGCGTCCCGCGCACGCTCCGGGTaGTGCAGGATCTCTGTGAGGGCCTGGCCGATGAGT +
Preference number: 6 (lower is better)
Translates to: SSTRRASRARSG*CRISVRAWPMS
Trigger: ACTCATCGGCCAGGCCCTCACAGAGATCCTGCAGCACCCGGAGCGTGCGCGGGACGCCCTGCGAGTGCTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000469670.1
ENST00000612946.4
CDS CCA 72 bp GCTGCACTGCTGGAGCCGGTCGCCCGGGTCGGAGGTTaGGAAGAAGACAGCCGCTGGCAGGCCACTGGTTGG +
Preference number: 6 (lower is better)
Translates to: AALLEPVARVGG*EEDSRWQATGW
Trigger: CCAACCAGTGGCCTGCCAGCGGCTGTCTTCTTCCCAACCTCCGACCCGGGCGACCGGCTCCAGCAGTGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000469670.1
ENST00000612946.4
CDS CAA 90 bp AGCGGCAGTGAGCCCAGCGAGGTGGTCTCGGTGCGCCAGTGTCCGTaGGGAGGGGCTTTCGGTGGAGCTCCGTCATGCTGCTGCAGGGAC +
Preference number: 6 (lower is better)
Translates to: SGSEPSEVVSVRQCP*GGAFGGAPSCCCRD
Trigger: GTCCCTGCAGCAGCATGACGGAGCTCCACCGAAAGCCCCTCCCAACGGACACTGGCGCACCGAGACCACCTCGCTGGGCTCACTGCCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp AGCACTCGCAGGGCGTCCCGCGCACGCTCCGGGTGCTaGAGGATCTCTGTGAGGGCCTGGCCGATGAGTGAT +
Preference number: 6 (lower is better)
Translates to: STRRASRARSGC*RISVRAWPMSD
Trigger: ATCACTCATCGGCCAGGCCCTCACAGAGATCCTGCAGCACCCGGAGCGTGCGCGGGACGCCCTGCGAGTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000469670.1
ENST00000612946.4
CDS GCA 72 bp GGGTCCAGCCGGAAGCCCACAGCGGTGAGGAGGGCCTaGCAGCCAGGGATGCCGCCCACTTTGTTCTCCACA +
Preference number: 6 (lower is better)
Translates to: GSSRKPTAVRRA*QPGMPPTLFST
Trigger: TGTGGAGAACAAAGTGGGCGGCATCCCTGGCTGGCAGGCCCTCCTCACCGCTGTGGGCTTCCGGCTGGACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000469670.1
ENST00000612946.4
CDS GCA 72 bp GATTGGGCAGACCCAGCAGGGACTGGAGTGTGCTGCTaGACTGCTGGAGCCGGTCGCCCGGGTCGGAGGTTG +
Preference number: 6 (lower is better)
Translates to: DWADPAGTGVCC*TAGAGRPGRRL
Trigger: CAACCTCCGACCCGGGCGACCGGCTCCAGCAGTGCAGCAGCACACTCCAGTCCCTGCTGGGTCTGCCCAATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000469670.1
ENST00000612946.4
CDS CCA 72 bp GGTTGGGAAGAAGACAGCCGCTGGCAGGCCACTGGTTaGGGGGTCCAGCCGGAAGCCCACAGCGGTGAGGAG +
Preference number: 6 (lower is better)
Translates to: GWEEDSRWQATG*GVQPEAHSGEE
Trigger: CTCCTCACCGCTGTGGGCTTCCGGCTGGACCCCCCAACCAGTGGCCTGCCAGCGGCTGTCTTCTTCCCAACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000469670.1
ENST00000612946.4
CDS CAA 72 bp TGCTGCACTGCTGGAGCCGGTCGCCCGGGTCGGAGGTaGGGAAGAAGACAGCCGCTGGCAGGCCACTGGTTG +
Preference number: 6 (lower is better)
Translates to: CCTAGAGRPGRR*GRRQPLAGHWL
Trigger: CAACCAGTGGCCTGCCAGCGGCTGTCTTCTTCCCAACCTCCGACCCGGGCGACCGGCTCCAGCAGTGCAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000469670.1
ENST00000612946.4
CDS CAA 72 bp GAGCCCAGCGAGGTGGTCTCGGTGCGCCAGTGTCCGTaGGGAGGGGCTTTCGGTGGAGCTCCGTCATGCTGC +
Preference number: 6 (lower is better)
Translates to: EPSEVVSVRQCP*GGAFGGAPSCC
Trigger: GCAGCATGACGGAGCTCCACCGAAAGCCCCTCCCAACGGACACTGGCGCACCGAGACCACCTCGCTGGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 90 bp CCGATGAGCATGAACCCTGCCCAGTTGGAGGGGTGCGAGAAGGCCTaGCTGCTCTGCACCACCTTCATGGCCTCCCCCAGGGCGGCGCTG +
Preference number: 6 (lower is better)
Translates to: PMSMNPAQLEGCEKA*LLCTTFMASPRAAL
Trigger: CAGCGCCGCCCTGGGGGAGGCCATGAAGGTGGTGCAGAGCAGCAAGGCCTTCTCGCACCCCTCCAACTGGGCAGGGTTCATGCTCATCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 72 bp CGGACACCATGTAGGCCTCTTCCTCGGCCGATGGCATaGGCCCCCACAGCCACCTGTCCATCACGGCCGATG +
Preference number: 6 (lower is better)
Translates to: RTPCRPLPRPMA*APTATCPSRPM
Trigger: CATCGGCCGTGATGGACAGGTGGCTGTGGGGGCCCATGCCATCGGCCGAGGAAGAGGCCTACATGGTGTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 72 bp CAGCTCGGACACCATGTAGGCCTCTTCCTCGGCCGATaGCATGGGCCCCCACAGCCACCTGTCCATCACGGC +
Preference number: 6 (lower is better)
Translates to: QLGHHVGLFLGR*HGPPQPPVHHG
Trigger: GCCGTGATGGACAGGTGGCTGTGGGGGCCCATGCCATCGGCCGAGGAAGAGGCCTACATGGTGTCCGAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 72 bp AGCCCAGCGAGGTGGTCTCGGTGCGCCAGTGTCCGTTaGGAGGGGCTTTCGGTGGAGCTCCGTCATGCTGCT +
Preference number: 6 (lower is better)
Translates to: SPARWSRCASVR*EGLSVELRHAA
Trigger: AGCAGCATGACGGAGCTCCACCGAAAGCCCCTCCCAACGGACACTGGCGCACCGAGACCACCTCGCTGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 90 bp TCCATGGGCGCGATGAGCAGGTCATACAGGGCACGGAGCGGGGGCTaGGCAAACGAGCTCTGCCTCCTGGGAAGAGAGGAGGTCCCGTCC +
Preference number: 6 (lower is better)
Translates to: SMGAMSRSYRARSGG*ANELCLLGREEVPS
Trigger: GGACGGGACCTCCTCTCTTCCCAGGAGGCAGAGCTCGTTTGCCAAGCCCCCGCTCCGTGCCCTGTATGACCTGCTCATCGCGCCCATGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 72 bp CTCGGTGCGCCAGTGTCCGTTGGGAGGGGCTTTCGGTaGAGCTCCGTCATGCTGCTGCAGGGACAGCTCCTT +
Preference number: 6 (lower is better)
Translates to: LGAPVSVGRGFR*SSVMLLQGQLL
Trigger: AAGGAGCTGTCCCTGCAGCAGCATGACGGAGCTCCACCGAAAGCCCCTCCCAACGGACACTGGCGCACCGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 90 bp GGCCCCCACAGCCACCTGTCCATCACGGCCGATGGTAGCTTGGGGTaGCCGATGACAGCCGCCATGGATGTGGAGCTGGAGTATGTGGGC +
Preference number: 6 (lower is better)
Translates to: GPHSHLSITADGSLG*PMTAAMDVELEYVG
Trigger: GCCCACATACTCCAGCTCCACATCCATGGCGGCTGTCATCGGCAACCCCAAGCTACCATCGGCCGTGATGGACAGGTGGCTGTGGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 90 bp GCCCGGCTGATGAGCTGCTCGCCCGTCTCGGAGGCAGTGATGAGTTaGCAAAGGGCTTGGAGGGCAGGATTGGGCAGACCCAGCAGGGAC +
Preference number: 6 (lower is better)
Translates to: ARLMSCSPVSEAVMS*QRAWRAGLGRPSRD
Trigger: GTCCCTGCTGGGTCTGCCCAATCCTGCCCTCCAAGCCCTTTGCAAACTCATCACTGCCTCCGAGACGGGCGAGCAGCTCATCAGCCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp GTCTGTGAGTCGCAGCCGGGCGATGGCCGGCCACTGTaGTGGCTCGGGCTGTCTTTGATGGACATCTCTGAG +
Preference number: 6 (lower is better)
Translates to: VCESQPGDGRPL*WLGLSLMDISE
Trigger: CTCAGAGATGTCCATCAAAGACAGCCCGAGCCAGCACAGTGGCCGGCCATCGCCCGGCTGCGACTCACAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 72 bp CCAGGGCCTGGTAGGCCACGGCAAGGTTCCCATGTGTaGAGGCCTGTGAGGCGCGGTCATTCACTTCCATGG +
Preference number: 6 (lower is better)
Translates to: PGPGRPRQGSHV*RPVRRGHSLPW
Trigger: CCATGGAAGTGAATGACCGCGCCTCACAGGCCTCCACACATGGGAACCTTGCCGTGGCCTACCAGGCCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 72 bp TCTGCACCACCTTCATGGCCTCCCCCAGGGCGGCGCTaGCTTTCAGGCCGTTCAGCAGGGATGAGTAGAAGG +
Preference number: 6 (lower is better)
Translates to: SAPPSWPPPGRR*LSGRSAGMSRR
Trigger: CCTTCTACTCATCCCTGCTGAACGGCCTGAAAGCCAGCGCCGCCCTGGGGGAGGCCATGAAGGTGGTGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 72 bp TGTGAGTCGCAGCCGGGCGATGGCCGGCCACTGTGCTaGCTCGGGCTGTCTTTGATGGACATCTCTGAGGTG +
Preference number: 6 (lower is better)
Translates to: CESQPGDGRPLC*LGLSLMDISEV
Trigger: CACCTCAGAGATGTCCATCAAAGACAGCCCGAGCCAGCACAGTGGCCGGCCATCGCCCGGCTGCGACTCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 72 bp GCGATGAGCAGGTCATACAGGGCACGGAGCGGGGGCTaGGCAAACGAGCTCTGCCTCCTGGGAAGAGAGGAG +
Preference number: 6 (lower is better)
Translates to: AMSRSYRARSGG*ANELCLLGREE
Trigger: CTCCTCTCTTCCCAGGAGGCAGAGCTCGTTTGCCAAGCCCCCGCTCCGTGCCCTGTATGACCTGCTCATCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 72 bp CCCCACAGCCACCTGTCCATCACGGCCGATGGTAGCTaGGGGTTGCCGATGACAGCCGCCATGGATGTGGAG +
Preference number: 6 (lower is better)
Translates to: PHSHLSITADGS*GLPMTAAMDVE
Trigger: CTCCACATCCATGGCGGCTGTCATCGGCAACCCCAAGCTACCATCGGCCGTGATGGACAGGTGGCTGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 72 bp ATGAACCCTGCCCAGTTGGAGGGGTGCGAGAAGGCCTaGCTGCTCTGCACCACCTTCATGGCCTCCCCCAGG +
Preference number: 6 (lower is better)
Translates to: MNPAQLEGCEKA*LLCTTFMASPR
Trigger: CCTGGGGGAGGCCATGAAGGTGGTGCAGAGCAGCAAGGCCTTCTCGCACCCCTCCAACTGGGCAGGGTTCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 90 bp GGCATGGGCCCCCACAGCCACCTGTCCATCACGGCCGATGGTAGCTaGGGGTTGCCGATGACAGCCGCCATGGATGTGGAGCTGGAGTAT +
Preference number: 6 (lower is better)
Translates to: GMGPHSHLSITADGS*GLPMTAAMDVELEY
Trigger: ATACTCCAGCTCCACATCCATGGCGGCTGTCATCGGCAACCCCAAGCTACCATCGGCCGTGATGGACAGGTGGCTGTGGGGGCCCATGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 90 bp TCGCAGCCGGGCGATGGCCGGCCACTGTGCTGGCTCGGGCTGTCTTaGATGGACATCTCTGAGGTGGTGGGGCTGCTATATCCGGAACTC +
Preference number: 6 (lower is better)
Translates to: SQPGDGRPLCWLGLS*MDISEVVGLLYPEL
Trigger: GAGTTCCGGATATAGCAGCCCCACCACCTCAGAGATGTCCATCAAAGACAGCCCGAGCCAGCACAGTGGCCGGCCATCGCCCGGCTGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 90 bp AGCCGGCTGATGAGCTGCTCGCCCGTCTCGGAGGCAGTGATGAGTTaGCAAAGGGCTTGGAGGGCAGGATTGGGCAGACCCAGCAGGGAC +
Preference number: 6 (lower is better)
Translates to: SRLMSCSPVSEAVMS*QRAWRAGLGRPSRD
Trigger: GTCCCTGCTGGGTCTGCCCAATCCTGCCCTCCAAGCCCTTTGCAAACTCATCACTGCCTCCGAGACGGGCGAGCAGCTCATCAGCCGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431039.1
CDS CAA 90 bp GGCGGCTTCCACCATCCCCACCAGAAGCTGGAGACTCTTGGGGTCTaGAGCCAGTCCAGATGCAAAGGCTGCCAGGGCATCGGCATGACG +
Preference number: 6 (lower is better)
Translates to: GGFHHPHQKLETLGV*SQSRCKGCQGIGMT
Trigger: CGTCATGCCGATGCCCTGGCAGCCTTTGCATCTGGACTGGCTCAAGACCCCAAGAGTCTCCAGCTTCTGGTGGGGATGGTGGAAGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397906.6
ENST00000490475.1
ENST00000612946.4
CDS CAA 90 bp GAGCTGCTCGCCCGTCTCGGAGGCAGTGATGAGTTTGCAAAGGGCTaGGAGGGCAGGATTGGGCAGACCCAGCAGGGACTGGAGTGTGCT +
Preference number: 6 (lower is better)
Translates to: ELLARLGGSDEFAKG*EGRIGQTQQGLECA
Trigger: AGCACACTCCAGTCCCTGCTGGGTCTGCCCAATCCTGCCCTCCAAGCCCTTTGCAAACTCATCACTGCCTCCGAGACGGGCGAGCAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000612946.4
CDS TCA 72 bp GCCAGTCCAGATGCAAAGGCTGCCAGGGCATCGGCATaGCGTCCAAGGTACTGGAGGGCAACACCCTGTCGG +
Preference number: 6 (lower is better)
Translates to: ASPDAKAARASA*RPRYWRATPCR
Trigger: CCGACAGGGTGTTGCCCTCCAGTACCTTGGACGTCATGCCGATGCCCTGGCAGCCTTTGCATCTGGACTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397906.6
ENST00000490475.1
ENST00000612946.4
CDS TCA 72 bp GGCCTCCCGGACACTGGCAATGTGCTGCTCCAGGGCTaGGCCGGTTGCTGTTGGAAGGGTTACACTGCTGCT +
Preference number: 6 (lower is better)
Translates to: GLPDTGNVLLQG*AGCCWKGYTAA
Trigger: AGCAGCAGTGTAACCCTTCCAACAGCAACCGGCTCAGCCCTGGAGCAGCACATTGCCAGTGTCCGGGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 72 bp ACTCGTGGCATCCCGGGAGCCGCCACAGCTGGACGCTaGTGGAGACCTGAATGGGAGCTGATGCCAAGTCCT +
Preference number: 6 (lower is better)
Translates to: TRGIPGAATAGR*WRPEWELMPSP
Trigger: AGGACTTGGCATCAGCTCCCATTCAGGTCTCCATCAGCGTCCAGCTGTGGCGGCTCCCGGGATGCCACGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000480563.1
ENST00000612946.4
CDS TCA 72 bp CAGTTTAAAGAGAGGCTGGTCCAGCTGGGAAGTCTGTaGGTCGCAGCCGGGCGATGGCCGGCCACTGTGCTG +
Preference number: 6 (lower is better)
Translates to: QFKERLVQLGSL*VAAGRWPATVL
Trigger: CAGCACAGTGGCCGGCCATCGCCCGGCTGCGACTCACAGACTTCCCAGCTGGACCAGCCTCTCTTTAAACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 72 bp AAATTGCCCAGGTTGCTGAGGGCCCGGGCCTCGCTCTaGATGTCTCGTAGCTCCCGGGCGATGTTCAAGTGG +
Preference number: 6 (lower is better)
Translates to: KLPRLLRARASL*MSRSSRAMFKW
Trigger: CCACTTGAACATCGCCCGGGAGCTACGAGACATCCAGAGCGAGGCCCGGGCCCTCAGCAACCTGGGCAATTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 72 bp GGCGTGAGGACCAAGGCCGACAGCTTCCAGGAGATGTaGGTGGCAAAGTGGACGCATTCAGCCTGGGTCAGG +
Preference number: 6 (lower is better)
Translates to: GVRTKADSFQEM*VAKWTHSAWVR
Trigger: CCTGACCCAGGCTGAATGCGTCCACTTTGCCACCCACATCTCCTGGAAGCTGTCGGCCTTGGTCCTCACGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 72 bp AGCCACCTGTCCATCACGGCCGATGGTAGCTTGGGGTaGCCGATGACAGCCGCCATGGATGTGGAGCTGGAG +
Preference number: 6 (lower is better)
Translates to: SHLSITADGSLG*PMTAAMDVELE
Trigger: CTCCAGCTCCACATCCATGGCGGCTGTCATCGGCAACCCCAAGCTACCATCGGCCGTGATGGACAGGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp CCGCCTGGTCGTACATGCCCAGGGCATTGTAGGCATTaGCCATATTCCCATAGGCACGGCCCTGGGCAGCAT +
Preference number: 6 (lower is better)
Translates to: PPGRTCPGHCRH*PYSHRHGPGQH
Trigger: ATGCTGCCCAGGGCCGTGCCTATGGGAATATGGGCAATGCCTACAATGCCCTGGGCATGTACGACCAGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp CATAGTCACCCAGGGCTTCGTAGCAATCCCCCAGGTTaGCATAGGCCCGGCCCCTGTCGAGCACAGACTCAT +
Preference number: 6 (lower is better)
Translates to: HSHPGLRSNPPG*HRPGPCRAQTH
Trigger: ATGAGTCTGTGCTCGACAGGGGCCGGGCCTATGGCAACCTGGGGGATTGCTACGAAGCCCTGGGTGACTATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 72 bp CAGGAGATGTGGGTGGCAAAGTGGACGCATTCAGCCTaGGTCAGGGCACTCATGACCCTCTCCTTGGTGGCC +
Preference number: 6 (lower is better)
Translates to: QEMWVAKWTHSA*VRALMTLSLVA
Trigger: GGCCACCAAGGAGAGGGTCATGAGTGCCCTGACCCAGGCTGAATGCGTCCACTTTGCCACCCACATCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 72 bp CTGGGGTACTTCAGTTTAAAGAGAGGCTGGTCCAGCTaGGAAGTCTGTGAGTCGCAGCCGGGCGATGGCCGG +
Preference number: 6 (lower is better)
Translates to: LGYFSLKRGWSS*EVCESQPGDGR
Trigger: CCGGCCATCGCCCGGCTGCGACTCACAGACTTCCCAGCTGGACCAGCCTCTCTTTAAACTGAAGTACCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 72 bp ATGAGCTGCTCGCCCGTCTCGGAGGCAGTGATGAGTTaGCAAAGGGCTTGGAGGGCAGGATTGGGCAGACCC +
Preference number: 6 (lower is better)
Translates to: MSCSPVSEAVMS*QRAWRAGLGRP
Trigger: GGGTCTGCCCAATCCTGCCCTCCAAGCCCTTTGCAAACTCATCACTGCCTCCGAGACGGGCGAGCAGCTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000612946.4
CDS CAA 90 bp TCCTGCCGTCCTCCGGGGCCTCCACCCTCTGATCCACCCTCGGGTTaGGAGACAAAGCTCATTGAGGAGGCAATGGAGCTCAGACTGTAC +
Preference number: 6 (lower is better)
Translates to: SCRPPGPPPSDPPSG*ETKLIEEAMELRLY
Trigger: GTACAGTCTGAGCTCCATTGCCTCCTCAATGAGCTTTGTCTCCAAACCCGAGGGTGGATCAGAGGGTGGAGGCCCCGGAGGACGGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000612946.4
CDS TCA 72 bp CCTCCTGGGAAGAGAGGAGGTCCCGTCCTGGGTCGGTaGCACAGTGTTACTGAACAGGCTCGTCATGCTCTG +
Preference number: 6 (lower is better)
Translates to: PPGKRGGPVLGR*HSVTEQARHAL
Trigger: CAGAGCATGACGAGCCTGTTCAGTAACACTGTGTCACCGACCCAGGACGGGACCTCCTCTCTTCCCAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 72 bp TGTCCATCACGGCCGATGGTAGCTTGGGGTTGCCGATaGCAGCCGCCATGGATGTGGAGCTGGAGTATGTGG +
Preference number: 6 (lower is better)
Translates to: CPSRPMVAWGCR*QPPWMWSWSMW
Trigger: CCACATACTCCAGCTCCACATCCATGGCGGCTGTCATCGGCAACCCCAAGCTACCATCGGCCGTGATGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 72 bp ATGGGAGAGAACAGGCCTGCTGAACGCACTGGTTTCTaGCGCTCTGAAGACAGCAGTGCTGCTGGGCGCCTG +
Preference number: 6 (lower is better)
Translates to: MGENRPAERTGF*RSEDSSAAGRL
Trigger: CAGGCGCCCAGCAGCACTGCTGTCTTCAGAGCGTCAGAAACCAGTGCGTTCAGCAGGCCTGTTCTCTCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp GCCTGTGAGGCGCGGTCATTCACTTCCATGGAGATCTaGAGCTCCTGCCGATGGTATTTGACCGCCTGGTCG +
Preference number: 6 (lower is better)
Translates to: ACEARSFTSMEI*SSCRWYLTAWS
Trigger: CGACCAGGCGGTCAAATACCATCGGCAGGAGCTGCAGATCTCCATGGAAGTGAATGACCGCGCCTCACAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp GTGTACATGGCATTGCGCTGCCCATTCTGGATGCGCTaGAGGGATTTCTCCACCAGGTGCAGCAGCACTCGC +
Preference number: 6 (lower is better)
Translates to: VYMALRCPFWMR*RDFSTRCSSTR
Trigger: GCGAGTGCTGCTGCACCTGGTGGAGAAATCCCTGCAGCGCATCCAGAATGGGCAGCGCAATGCCATGTACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000469670.1
ENST00000612946.4
CDS GCA 72 bp CCGTTGGGAGGGGCTTTCGGTGGAGCTCCGTCATGCTaGTGCAGGGACAGCTCCTTCAGTTCAAGCTTATCC +
Preference number: 6 (lower is better)
Translates to: PLGGAFGGAPSC*CRDSSFSSSLS
Trigger: GGATAAGCTTGAACTGAAGGAGCTGTCCCTGCAGCAGCATGACGGAGCTCCACCGAAAGCCCCTCCCAACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 72 bp CGGCTTCCACCATCCCCACCAGAAGCTGGAGACTCTTaGGGTCTTGAGCCAGTCCAGATGCAAAGGCTGCCA +
Preference number: 6 (lower is better)
Translates to: RLPPSPPEAGDS*GLEPVQMQRLP
Trigger: TGGCAGCCTTTGCATCTGGACTGGCTCAAGACCCCAAGAGTCTCCAGCTTCTGGTGGGGATGGTGGAAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397906.6
ENST00000490475.1
ENST00000612946.4
CDS CCA 72 bp CTCCGGGGCCTCCACCCTCTGATCCACCCTCGGGTTTaGAGACAAAGCTCATTGAGGAGGCAATGGAGCTCA +
Preference number: 6 (lower is better)
Translates to: LRGLHPLIHPRV*RQSSLRRQWSS
Trigger: TGAGCTCCATTGCCTCCTCAATGAGCTTTGTCTCCAAACCCGAGGGTGGATCAGAGGGTGGAGGCCCCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000612946.4
CDS GCA 72 bp GCGCGGTCATTCACTTCCATGGAGATCTGCAGCTCCTaGCGATGGTATTTGACCGCCTGGTCGTACATGCCC +
Preference number: 6 (lower is better)
Translates to: ARSFTSMEICSS*RWYLTAWSYMP
Trigger: GGGCATGTACGACCAGGCGGTCAAATACCATCGGCAGGAGCTGCAGATCTCCATGGAAGTGAATGACCGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp GGGATGTGTACATGGCATTGCGCTGCCCATTCTGGATaGGCTGCAGGGATTTCTCCACCAGGTGCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: GMCTWHCAAHSG*AAGISPPGAAA
Trigger: TGCTGCTGCACCTGGTGGAGAAATCCCTGCAGCGCATCCAGAATGGGCAGCGCAATGCCATGTACACATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000469670.1
ENST00000612946.4
CDS GCA 72 bp CAGCCAGGGATGCCGCCCACTTTGTTCTCCACACTCTaGTGGGATGTGTACATGGCATTGCGCTGCCCATTC +
Preference number: 6 (lower is better)
Translates to: QPGMPPTLFSTL*WDVYMALRCPF
Trigger: GAATGGGCAGCGCAATGCCATGTACACATCCCAGCAGAGTGTGGAGAACAAAGTGGGCGGCATCCCTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000469670.1
ENST00000612946.4
CDS CCA 72 bp TTGAGGAGGCAATGGAGCTCAGACTGTACACAGAGATaGCATCTGAGGCGATGCTGTCCGCACCGGTGGGAG +
Preference number: 6 (lower is better)
Translates to: LRRQWSSDCTQR*HLRRCCPHRWE
Trigger: CTCCCACCGGTGCGGACAGCATCGCCTCAGATGCCATCTCTGTGTACAGTCTGAGCTCCATTGCCTCCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000612946.4
CDS CAA 90 bp CACTGCCAGCAGGAGACTGGTGGCCGGAGCTTGGGGACATGTTCCTaGGTGATTTGGAAATGTGAGCGCTGTAAGGAGAGCTGGGGTACT +
Preference number: 6 (lower is better)
Translates to: HCQQETGGRSLGTCS*VIWKCERCKESWGT
Trigger: AGTACCCCAGCTCTCCTTACAGCGCTCACATTTCCAAATCACCAAGGAACATGTCCCCAAGCTCCGGCCACCAGTCTCCTGCTGGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 90 bp TGGCTGCCATTTTCAGTTTGTCTATGTCGGGAGCGTCTGCTGGACTaGAGCGAGCAGATCCAGCTGAGGAGTAGGAGAGAGCTGGGGAGG +
Preference number: 6 (lower is better)
Translates to: WLPFSVCLCRERLLD*SEQIQLRSRRELGR
Trigger: CCTCCCCAGCTCTCTCCTACTCCTCAGCTGGATCTGCTCGCTCAAGTCCAGCAGACGCTCCCGACATAGACAAACTGAAAATGGCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 72 bp TTCAGTGCGGCTTCTAAGACAACCACAGAGGCCCCATaGTGGCCAGCTGTCAGGAGTTCCTGCCCAACCACA +
Preference number: 6 (lower is better)
Translates to: FSAASKTTTEAP*WPAVRSSCPTT
Trigger: TGTGGTTGGGCAGGAACTCCTGACAGCTGGCCATCATGGGGCCTCTGTGGTTGTCTTAGAAGCCGCACTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397906.6
ENST00000490475.1
ENST00000612946.4
CDS TCA 72 bp CTTCCATGGAGATCTGCAGCTCCTGCCGATGGTATTTaGCCGCCTGGTCGTACATGCCCAGGGCATTGTAGG +
Preference number: 6 (lower is better)
Translates to: LPWRSAAPADGI*PPGRTCPGHCR
Trigger: CCTACAATGCCCTGGGCATGTACGACCAGGCGGTCAAATACCATCGGCAGGAGCTGCAGATCTCCATGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 72 bp CAGGGCGGCGCTGGCTTTCAGGCCGTTCAGCAGGGATaGGTAGAAGGCATGGATGAACATCTTAGAAGCAGC +
Preference number: 6 (lower is better)
Translates to: QGGAGFQAVQQG*VEGMDEHLRSS
Trigger: GCTGCTTCTAAGATGTTCATCCATGCCTTCTACTCATCCCTGCTGAACGGCCTGAAAGCCAGCGCCGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 72 bp TCTGACGCTCTGAAGACAGCAGTGCTGCTGGGCGCCTaGACGCCGTCTTCAGGGTTATTACTCTTGCTCACC +
Preference number: 6 (lower is better)
Translates to: SDALKTAVLLGA*TPSSGLLLLLT
Trigger: GGTGAGCAAGAGTAATAACCCTGAAGACGGCGTTCAGGCGCCCAGCAGCACTGCTGTCTTCAGAGCGTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp CAAAGTTCCTCCGGTAGTGATAGGCACTGCCCAGGTTaGTATAAGCCCGGGCCTCTTCTCGCTTGTTCCCCA +
Preference number: 6 (lower is better)
Translates to: QSSSGSDRHCPG*YKPGPLLACSP
Trigger: TGGGGAACAAGCGAGAAGAGGCCCGGGCTTATAGCAACCTGGGCAGTGCCTATCACTACCGGAGGAACTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp TGGCCTTGTCAAAGTTCCTCCGGTAGTGATAGGCACTaGCCAGGTTGCTATAAGCCCGGGCCTCTTCTCGCT +
Preference number: 6 (lower is better)
Translates to: WPCQSSSGSDRH*PGCYKPGPLLA
Trigger: AGCGAGAAGAGGCCCGGGCTTATAGCAACCTGGGCAGTGCCTATCACTACCGGAGGAACTTTGACAAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp CCAGGGCTGAGCCGGTTGCTGTTGGAAGGGTTACACTaGTGCTGGCCTGGAAGTCACTTGAGTTTTCCACTG +
Preference number: 6 (lower is better)
Translates to: PGLSRLLLEGLH*CWPGSHLSFPL
Trigger: CAGTGGAAAACTCAAGTGACTTCCAGGCCAGCAGCAGTGTAACCCTTCCAACAGCAACCGGCTCAGCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp TCCACACTCTGCTGGGATGTGTACATGGCATTGCGCTaGCCATTCTGGATGCGCTGCAGGGATTTCTCCACC +
Preference number: 6 (lower is better)
Translates to: STLCWDVYMALR*PFWMRCRDFST
Trigger: GGTGGAGAAATCCCTGCAGCGCATCCAGAATGGGCAGCGCAATGCCATGTACACATCCCAGCAGAGTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000469670.1
ENST00000612946.4
CDS GCA 72 bp TTGGGAGGGGCTTTCGGTGGAGCTCCGTCATGCTGCTaGAGGGACAGCTCCTTCAGTTCAAGCTTATCCACT +
Preference number: 6 (lower is better)
Translates to: LGGAFGGAPSCC*RDSSFSSSLST
Trigger: AGTGGATAAGCTTGAACTGAAGGAGCTGTCCCTGCAGCAGCATGACGGAGCTCCACCGAAAGCCCCTCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp GTTCAGCTTAACGTCACTCCCGATGAGCATGAACCCTaGAGAAAGCAAAGGAGGGCACCTCAGCAGGGCAGC +
Preference number: 6 (lower is better)
Translates to: VQLNVTPDEHEP*RKQRRAPQQGS
Trigger: GCTGCCCTGCTGAGGTGCCCTCCTTTGCTTTCTGCAGGGTTCATGCTCATCGGGAGTGACGTTAAGCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469670.1
CDS CCA 72 bp GTTTGTGACTGGCCAGTGCATTGGGGTAGTCTCCAATaGCTGTGTACACGTGGCCCAGACTGCTCAAGGCTG +
Preference number: 6 (lower is better)
Translates to: VCDWPVHWGSLQ*LCTRGPDCSRL
Trigger: CAGCCTTGAGCAGTCTGGGCCACGTGTACACAGCCATTGGAGACTACCCCAATGCACTGGCCAGTCACAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 72 bp GACTCGAGGGAGGAGGAGCTGTCAAGGCTGAGGCGCTaGGGTAGCTCAGTAGAATCAAACAGAGACAGCAGG +
Preference number: 6 (lower is better)
Translates to: DSREEELSRLRR*GSSVESNRDSR
Trigger: CCTGCTGTCTCTGTTTGATTCTACTGAGCTACCCAAGCGCCTCAGCCTTGACAGCTCCTCCTCCCTCGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000480563.1
ENST00000612946.4
CDS TCA 72 bp GCAGACTTCCCAGCTCTCCATAGGCCTGGGCTTTATTaGAGGCCTCTCCAAGTTCATGAGCAACCACGAGCC +
Preference number: 6 (lower is better)
Translates to: ADFPALHRPGLY*RPLQVHEQPRA
Trigger: GGCTCGTGGTTGCTCATGAACTTGGAGAGGCCTTCAATAAAGCCCAGGCCTATGGAGAGCTGGGAAGTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 72 bp GCTCCTGGCTGGGGGCTTTGGTTTAACAGTGACTGGTaGTGGCTGACTCTTCTGATGGGAGAGAACAGGCCT +
Preference number: 6 (lower is better)
Translates to: APGWGLWFNSDW*WLTLLMGENRP
Trigger: AGGCCTGTTCTCTCCCATCAGAAGAGTCAGCCATCACCAGTCACTGTTAAACCAAAGCCCCCAGCCAGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 72 bp ACTGTGCTGGCTCGGGCTGTCTTTGATGGACATCTCTaGGGTGGTGGGGCTGCTATATCCGGAACTCACCTT +
Preference number: 6 (lower is better)
Translates to: TVLARAVFDGHL*GGGAAISGTHL
Trigger: AAGGTGAGTTCCGGATATAGCAGCCCCACCACCTCAGAGATGTCCATCAAAGACAGCCCGAGCCAGCACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 72 bp AGACTGGTGGCCGGAGCTTGGGGACATGTTCCTTGGTaGTTTGGAAATGTGAGCGCTGTAAGGAGAGCTGGG +
Preference number: 6 (lower is better)
Translates to: RLVAGAWGHVPW*FGNVSAVRRAG
Trigger: CCCAGCTCTCCTTACAGCGCTCACATTTCCAAATCACCAAGGAACATGTCCCCAAGCTCCGGCCACCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp ACCACGAGCCTCTTTTCAAAGCACACAAGGGCTTGCTaGAAGCTCCCCATTGCCCTGTGTCCATTTCCCAGG +
Preference number: 6 (lower is better)
Translates to: TTSLFSKHTRAC*KLPIALCPFPR
Trigger: CCTGGGAAATGGACACAGGGCAATGGGGAGCTTGCAGCAAGCCCTTGTGTGCTTTGAAAAGAGGCTCGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp GCAACCACGAGCCTCTTTTCAAAGCACACAAGGGCTTaGTGCAAGCTCCCCATTGCCCTGTGTCCATTTCCC +
Preference number: 6 (lower is better)
Translates to: ATTSLFSKHTRA*CKLPIALCPFP
Trigger: GGGAAATGGACACAGGGCAATGGGGAGCTTGCAGCAAGCCCTTGTGTGCTTTGAAAAGAGGCTCGTGGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp TTGTCCTGTTTGTCGTTCCACCAGAAGATCAGCAAATaGCCTTGTCCGTCCCCTTTCTGCCACAGCCAGGGC +
Preference number: 6 (lower is better)
Translates to: LSCLSFHQKISK*PCPSPFCHSQG
Trigger: GCCCTGGCTGTGGCAGAAAGGGGACGGACAAGGGCATTTGCTGATCTTCTGGTGGAACGACAAACAGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 72 bp TCATTCACTTCCATGGAGATCTGCAGCTCCTGCCGATaGTATTTGACCGCCTGGTCGTACATGCCCAGGGCA +
Preference number: 6 (lower is better)
Translates to: SFTSMEICSSCR*YLTAWSYMPRA
Trigger: TGCCCTGGGCATGTACGACCAGGCGGTCAAATACCATCGGCAGGAGCTGCAGATCTCCATGGAAGTGAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 72 bp GGTGGCCGGAGCTTGGGGACATGTTCCTTGGTGATTTaGAAATGTGAGCGCTGTAAGGAGAGCTGGGGTACT +
Preference number: 6 (lower is better)
Translates to: GGRSLGTCSLVI*KCERCKESWGT
Trigger: AGTACCCCAGCTCTCCTTACAGCGCTCACATTTCCAAATCACCAAGGAACATGTCCCCAAGCTCCGGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 72 bp CTCGTCATGCTCTGGCAGCTCCTGTTAAACAGGTTATaGCGGCGAACCATCCGCAGAAAGCCAGTGGGGTCA +
Preference number: 6 (lower is better)
Translates to: LVMLWQLLLNRL*RRTIRRKPVGS
Trigger: TGACCCCACTGGCTTTCTGCGGATGGTTCGCCGCAATAACCTGTTTAACAGGAGCTGCCAGAGCATGACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 72 bp GGACTGGAGCGCGAAGTGCACAGTCCGTCGATTAGCTaGCTTCCCGGTTTTCAGGATTACTTCCTCCTGACC +
Preference number: 6 (lower is better)
Translates to: GLEREVHSPSIS*LPGFQDYFLLT
Trigger: GGTCAGGAGGAAGTAATCCTGAAAACCGGGAAGCAAGCTAATCGACGGACTGTGCACTTCGCGCTCCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000480563.1
ENST00000612946.4
CDS CAA 72 bp CAGGAGACTGGTGGCCGGAGCTTGGGGACATGTTCCTaGGTGATTTGGAAATGTGAGCGCTGTAAGGAGAGC +
Preference number: 6 (lower is better)
Translates to: QETGGRSLGTCS*VIWKCERCKES
Trigger: GCTCTCCTTACAGCGCTCACATTTCCAAATCACCAAGGAACATGTCCCCAAGCTCCGGCCACCAGTCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 72 bp GGAGGTAAGTGTCACCTGCCTTCACTGGCTGAGAAGTaGGCAGAGCAAGAACATGTGTCCAGGCCCAATCCC +
Preference number: 6 (lower is better)
Translates to: GGKCHLPSLAEK*AEQEHVSRPNP
Trigger: GGGATTGGGCCTGGACACATGTTCTTGCTCTGCCAACTTCTCAGCCAGTGAAGGCAGGTGACACTTACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442232.1
CDS CAA 90 bp GGCATAGCCAAGATTGTGGCAGACCTTCCCTTCTCCTTCCATGTCTaGAAGGTCGGGAGCAAGCCGGAGGTACTGTTCATAATAGGGGGC +
Preference number: 6 (lower is better)
Translates to: GIAKIVADLPFSFHV*KVGSKPEVLFIIGG
Trigger: GCCCCCTATTATGAACAGTACCTCCGGCTTGCTCCCGACCTTCAAGACATGGAAGGAGAAGGGAAGGTCTGCCACAATCTTGGCTATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp TGTTCTCCACACTCTGCTGGGATGTGTACATGGCATTaGGCTGCCCATTCTGGATGCGCTGCAGGGATTTCT +
Preference number: 6 (lower is better)
Translates to: CSPHSAGMCTWH*AAHSGCAAGIS
Trigger: AGAAATCCCTGCAGCGCATCCAGAATGGGCAGCGCAATGCCATGTACACATCCCAGCAGAGTGTGGAGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000469670.1
ENST00000612946.4
CDS GCA 72 bp GAATCAAACAGAGACAGCAGGGACTGGAGCGCGAAGTaGACAGTCCGTCGATTAGCTTGCTTCCCGGTTTTC +
Preference number: 6 (lower is better)
Translates to: ESNRDSRDWSAK*TVRRLACFPVF
Trigger: GAAAACCGGGAAGCAAGCTAATCGACGGACTGTGCACTTCGCGCTCCAGTCCCTGCTGTCTCTGTTTGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000480563.1
ENST00000612946.4
CDS GCA 72 bp AGGGCTGAAGCAAACGCCAGGCCCCCATCTGCAGGCTaGTCAGAGTCAGTGGGTATAAAAGATGCTTTAGCA +
Preference number: 6 (lower is better)
Translates to: RAEANARPPSAG*SESVGIKDALA
Trigger: TGCTAAAGCATCTTTTATACCCACTGACTCTGAGCAGCCTGCAGATGGGGGCCTGGCGTTTGCTTCAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 72 bp CCGGTTGCTGTTGGAAGGGTTACACTGCTGCTGGCCTaGAAGTCACTTGAGTTTTCCACTGTGTTCTCACCC +
Preference number: 6 (lower is better)
Translates to: PVAVGRVTLLLA*KSLEFSTVFSP
Trigger: GGGTGAGAACACAGTGGAAAACTCAAGTGACTTCCAGGCCAGCAGCAGTGTAACCCTTCCAACAGCAACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 72 bp GGTAGCTCAGTAGAATCAAACAGAGACAGCAGGGACTaGAGCGCGAAGTGCACAGTCCGTCGATTAGCTTGC +
Preference number: 6 (lower is better)
Translates to: GSSVESNRDSRD*SAKCTVRRLAC
Trigger: GCAAGCTAATCGACGGACTGTGCACTTCGCGCTCCAGTCCCTGCTGTCTCTGTTTGATTCTACTGAGCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000480563.1
ENST00000612946.4
CDS CCA 72 bp CTCATGCCTCCGGCTGTCCCAGGTTGGGGTTGTTTGTaGTCTGGTGAGAAGCATGTGTTTCGGTTTTCTTGG +
Preference number: 6 (lower is better)
Translates to: LMPPAVPGWGCL*SGEKHVFRFSW
Trigger: CCAAGAAAACCGAAACACATGCTTCTCACCAGACCACAAACAACCCCAACCTGGGACAGCCGGAGGCATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 72 bp GAGGTAAGTGTCACCTGCCTTCACTGGCTGAGAAGTTaGCAGAGCAAGAACATGTGTCCAGGCCCAATCCCA +
Preference number: 6 (lower is better)
Translates to: EVSVTCLHWLRS*QSKNMCPGPIP
Trigger: TGGGATTGGGCCTGGACACATGTTCTTGCTCTGCCAACTTCTCAGCCAGTGAAGGCAGGTGACACTTACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442232.1
CDS CAA 72 bp AGCAACCACGAGCCTCTTTTCAAAGCACACAAGGGCTaGCTGCAAGCTCCCCATTGCCCTGTGTCCATTTCC +
Preference number: 6 (lower is better)
Translates to: SNHEPLFKAHKG*LQAPHCPVSIS
Trigger: GGAAATGGACACAGGGCAATGGGGAGCTTGCAGCAAGCCCTTGTGTGCTTTGAAAAGAGGCTCGTGGTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 72 bp CTGTTTGTCGTTCCACCAGAAGATCAGCAAATGCCCTaGTCCGTCCCCTTTCTGCCACAGCCAGGGCTTCAT +
Preference number: 6 (lower is better)
Translates to: LFVVPPEDQQMP*SVPFLPQPGLH
Trigger: ATGAAGCCCTGGCTGTGGCAGAAAGGGGACGGACAAGGGCATTTGCTGATCTTCTGGTGGAACGACAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 72 bp TTGTTCTCCACACTCTGCTGGGATGTGTACATGGCATaGCGCTGCCCATTCTGGATGCGCTGCAGGGATTTC +
Preference number: 6 (lower is better)
Translates to: LFSTLCWDVYMA*RCPFWMRCRDF
Trigger: GAAATCCCTGCAGCGCATCCAGAATGGGCAGCGCAATGCCATGTACACATCCCAGCAGAGTGTGGAGAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000469670.1
ENST00000612946.4
CDS CAA 72 bp TCCGCAAACCTGGTTGCATCCCTGTTAAACAGGTTATaGCGGCGAACCATCCGCAGAAAGCCAGTGGGGTCA +
Preference number: 6 (lower is better)
Translates to: SANLVASLLNRL*RRTIRRKPVGS
Trigger: TGACCCCACTGGCTTTCTGCGGATGGTTCGCCGCAATAACCTGTTTAACAGGGATGCAACCAGGTTTGCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442232.1
CDS CAA 90 bp CTTGTTGTCCTGTTTGTCGTTCCACCAGAAGATCAGCAAATGCCCTaGTCCGTCCCCTTTCTGCCACAGCCAGGGCTTCATCATGATGGC +
Preference number: 6 (lower is better)
Translates to: LVVLFVVPPEDQQMP*SVPFLPQPGLHHDG
Trigger: GCCATCATGATGAAGCCCTGGCTGTGGCAGAAAGGGGACGGACAAGGGCATTTGCTGATCTTCTGGTGGAACGACAAACAGGACAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 90 bp AGACAGCAGGGACTGGAGCGCGAAGTGCACAGTCCGTCGATTAGCTaGCTTCCCGGTTTTCAGGATTACTTCCTCCTGACCAACTTCACA +
Preference number: 6 (lower is better)
Translates to: RQQGLEREVHSPSIS*LPGFQDYFLLTNFT
Trigger: TGTGAAGTTGGTCAGGAGGAAGTAATCCTGAAAACCGGGAAGCAAGCTAATCGACGGACTGTGCACTTCGCGCTCCAGTCCCTGCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000480563.1
ENST00000612946.4
CDS TCA 72 bp CACTGCTCAGGGCAGAGAAAACAGAACCTCTCAGTTTaGGGCTGCAGGTGCCAATCTTCAGTGCGGCTTCTA +
Preference number: 6 (lower is better)
Translates to: HCSGQRKQNLSV*GCRCQSSVRLL
Trigger: TAGAAGCCGCACTGAAGATTGGCACCTGCAGCCTCAAACTGAGAGGTTCTGTTTTCTCTGCCCTGAGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397906.6
ENST00000490475.1
ENST00000612946.4
CDS TCA 72 bp CTGCAAGGCATGATGGGTCCTTCCAAGGCTACTATATaGCACCGTCTTGGCCGCCAAGTCATTCATCTGTGC +
Preference number: 6 (lower is better)
Translates to: LQGMMGPSKATI*HRLGRQVIHLC
Trigger: GCACAGATGAATGACTTGGCGGCCAAGACGGTGTCATATAGTAGCCTTGGAAGGACCCATCATGCCTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp AGTGAGAGCCTCCCGGTAATTTCCTTTGGAGAAGAATaGAGAGCCCAGATTCCCATGAGCTCGGCATTCTCC +
Preference number: 6 (lower is better)
Translates to: SESLPVISFGEE*RAQIPMSSAFS
Trigger: GGAGAATGCCGAGCTCATGGGAATCTGGGCTCTGCATTCTTCTCCAAAGGAAATTACCGGGAGGCTCTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397906.6
ENST00000490475.1
ENST00000612946.4
CDS GCA 72 bp GGCCCGCATCTCAATAGCCTTCTCCATCAACTCCTGTaGCAGCTCCAGGACATAGTTATGGTAAGACATGGC +
Preference number: 6 (lower is better)
Translates to: GPHLNSLLHQLL*QLQDIVMVRHG
Trigger: GCCATGTCTTACCATAACTATGTCCTGGAGCTGGCACAGGAGTTGATGGAGAAGGCTATTGAGATGCGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp CCGTCTTGGCCGCCAAGTCATTCATCTGTGCAGCAATaGTCAAGTGCTGTTCTTGATAGACCACAGCCCTCT +
Preference number: 6 (lower is better)
Translates to: PSWPPSHSSVQQ*SSAVLDRPQPS
Trigger: AGAGGGCTGTGGTCTATCAAGAACAGCACTTGAGCATTGCTGCACAGATGAATGACTTGGCGGCCAAGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 72 bp TCAGCTTTGCTCAGTACCGGTCCATCAGGACTTCTCTaGCCAATAGTGTCAGCACCAAAGAGAGGAATCGGC +
Preference number: 6 (lower is better)
Translates to: SALLSTGPSGLL*PIVSAPKRGIG
Trigger: GCCGATTCCTCTCTTTGGTGCTGACACTATTGGCCAGAGAAGTCCTGATGGACCGGTACTGAGCAAAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000468807.1
CDS CCA 72 bp CAAGAAGAACACACTGTTTGTGACTGGCCAGTGCATTaGGGTAGTCTCCAATGGCTGTGTACACGTGGCCCA +
Preference number: 6 (lower is better)
Translates to: QEEHTVCDWPVH*GSLQWLCTRGP
Trigger: TGGGCCACGTGTACACAGCCATTGGAGACTACCCCAATGCACTGGCCAGTCACAAACAGTGTGTTCTTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 72 bp GGGTTGTTGGTTTCCTCTGCTATCTGTAGATCAAGCTaGTGGTACTGCAGGGCTGTGTCATACTCCCCCATC +
Preference number: 6 (lower is better)
Translates to: GLLVSSAICRSS*WYCRAVSYSPI
Trigger: GATGGGGGAGTATGACACAGCCCTGCAGTACCACCAGCTTGATCTACAGATAGCAGAGGAAACCAACAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 72 bp CTGAGCCGGTTGCTGTTGGAAGGGTTACACTGCTGCTaGCCTGGAAGTCACTTGAGTTTTCCACTGTGTTCT +
Preference number: 6 (lower is better)
Translates to: LSRLLLEGLHCC*PGSHLSFPLCS
Trigger: AGAACACAGTGGAAAACTCAAGTGACTTCCAGGCCAGCAGCAGTGTAACCCTTCCAACAGCAACCGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 72 bp GTCATTCATCTGTGCAGCAATGCTCAAGTGCTGTTCTaGATAGACCACAGCCCTCTCGAAGGTGCCCAGGGA +
Preference number: 6 (lower is better)
Translates to: VIHLCSNAQVLF*IDHSPLEGAQG
Trigger: TCCCTGGGCACCTTCGAGAGGGCTGTGGTCTATCAAGAACAGCACTTGAGCATTGCTGCACAGATGAATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 72 bp GACTGGGGAGTAGGGGTCGGAGTCTTGTTGTCCTGTTaGTCGTTCCACCAGAAGATCAGCAAATGCCCTTGT +
Preference number: 6 (lower is better)
Translates to: DWGVGVGVLLSC*SFHQKISKCPC
Trigger: ACAAGGGCATTTGCTGATCTTCTGGTGGAACGACAAACAGGACAACAAGACTCCGACCCCTACTCCCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 72 bp CCTCTGATCCACCCTCGGGTTTGGAGACAAAGCTCATaGAGGAGGCAATGGAGCTCAGACTGTACACAGAGA +
Preference number: 6 (lower is better)
Translates to: PLIHPRVWRQSS*RRQWSSDCTQR
Trigger: TCTCTGTGTACAGTCTGAGCTCCATTGCCTCCTCAATGAGCTTTGTCTCCAAACCCGAGGGTGGATCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397906.6
ENST00000431039.1
ENST00000612946.4
CDS CAA 72 bp ATTTTCACTGGAGAATTTGGAGTGCTGATGCTCCCTTaGGAGCTCACCGAGACTCTCATGCCTCCGGCTGTC +
Preference number: 6 (lower is better)
Translates to: IFTGEFGVLMLP*ELTETLMPPAV
Trigger: GACAGCCGGAGGCATGAGAGTCTCGGTGAGCTCCAAAGGGAGCATCAGCACTCCAAATTCTCCAGTGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 72 bp TTTTCAGTTTGTCTATGTCGGGAGCGTCTGCTGGACTaGAGCGAGCAGATCCAGCTGAGGAGTAGGAGAGAG +
Preference number: 6 (lower is better)
Translates to: FSVCLCRERLLD*SEQIQLRSRRE
Trigger: CTCTCTCCTACTCCTCAGCTGGATCTGCTCGCTCAAGTCCAGCAGACGCTCCCGACATAGACAAACTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 90 bp GGCCGCCAAGTCATTCATCTGTGCAGCAATGCTCAAGTGCTGTTCTaGATAGACCACAGCCCTCTCGAAGGTGCCCAGGGATTCATAAGT +
Preference number: 6 (lower is better)
Translates to: GRQVIHLCSNAQVLF*IDHSPLEGAQGFIS
Trigger: ACTTATGAATCCCTGGGCACCTTCGAGAGGGCTGTGGTCTATCAAGAACAGCACTTGAGCATTGCTGCACAGATGAATGACTTGGCGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 90 bp AGAGGGAGAGTTTGTAGTCCGTGCTCAGCTGTGCCTCATGTCGGATaGTTTCAAACAAGGCTGATGCCCTATAAAGCTGGTGTTGGGCCT +
Preference number: 6 (lower is better)
Translates to: RGRVCSPCSAVPHVG*FQTRLMPYKAGVGP
Trigger: AGGCCCAACACCAGCTTTATAGGGCATCAGCCTTGTTTGAAACAATCCGACATGAGGCACAGCTGAGCACGGACTACAAACTCTCCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 72 bp CAGCTGTGCCTCATGTCGGATTGTTTCAAACAAGGCTaGTGCCCTATAAAGCTGGTGTTGGGCCTCCTCCAA +
Preference number: 6 (lower is better)
Translates to: QLCLMSDCFKQG*CPIKLVLGLLQ
Trigger: TTGGAGGAGGCCCAACACCAGCTTTATAGGGCATCAGCCTTGTTTGAAACAATCCGACATGAGGCACAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp TGCTTGGCTCAACTTGTCGTGAAGGTCTTTAGCCAGTaGCAGATCCTGTTCGTAGTACTTCACTGCCTCCTG +
Preference number: 6 (lower is better)
Translates to: CLAQLVVKVFSQ*QILFVVLHCLL
Trigger: CAGGAGGCAGTGAAGTACTACGAACAGGATCTGGCACTGGCTAAAGACCTTCACGACAAGTTGAGCCAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp GGGCCTTGTCATACTTCTGGATCATTCGGTATGCAGTaGCCAGGGCTGCATATGCACTGGCTTCTAATCTTC +
Preference number: 6 (lower is better)
Translates to: GPCHTSGSFGMQ*PGLHMHWLLIF
Trigger: GAAGATTAGAAGCCAGTGCATATGCAGCCCTGGGCACTGCATACCGAATGATCCAGAAGTATGACAAGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp ATTCCAACCATATTTTTAACAGCCCGGCTGATGAGCTaGTCGCCCGTCTCGGAGGCAGTGATGAGTTTGCAA +
Preference number: 6 (lower is better)
Translates to: IPTIFLTARLMS*SPVSEAVMSLQ
Trigger: TTGCAAACTCATCACTGCCTCCGAGACGGGCGAGCAGCTCATCAGCCGGGCTGTTAAAAATATGGTTGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 72 bp CCTGTGCCAGCTCCAGGACATAGTTATGGTAAGACATaGCCTTGTCAAAGTTCCTCCGGTAGTGATAGGCAC +
Preference number: 6 (lower is better)
Translates to: PVPAPGHSYGKT*PCQSSSGSDRH
Trigger: GTGCCTATCACTACCGGAGGAACTTTGACAAGGCCATGTCTTACCATAACTATGTCCTGGAGCTGGCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 72 bp TTGTTGGTTTCCTCTGCTATCTGTAGATCAAGCTGGTaGTACTGCAGGGCTGTGTCATACTCCCCCATCTGC +
Preference number: 6 (lower is better)
Translates to: LLVSSAICRSSW*YCRAVSYSPIC
Trigger: GCAGATGGGGGAGTATGACACAGCCCTGCAGTACCACCAGCTTGATCTACAGATAGCAGAGGAAACCAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 72 bp GATGGGTCCTTCCAAGGCTACTATATGACACCGTCTTaGCCGCCAAGTCATTCATCTGTGCAGCAATGCTCA +
Preference number: 6 (lower is better)
Translates to: DGSFQGYYMTPS*PPSHSSVQQCS
Trigger: TGAGCATTGCTGCACAGATGAATGACTTGGCGGCCAAGACGGTGTCATATAGTAGCCTTGGAAGGACCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 72 bp TGCTGGGGTGTGCTCTGCCAGAACATCTTCAGGTTATaGACAGCCTGCACCTTTTCATCAATGGCTGCCATT +
Preference number: 6 (lower is better)
Translates to: CWGVLCQNIFRL*TACTFSSMAAI
Trigger: AATGGCAGCCATTGATGAAAAGGTGCAGGCTGTCCATAACCTGAAGATGTTCTGGCAGAGCACACCCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 72 bp ACACCCTGTCGGAAGTATGCCTTTGGCCACTTGGGATaGAGAAGTCGAGCTTTGATTGCATCATCCAGTGCC +
Preference number: 6 (lower is better)
Translates to: TPCRKYAFGHLG*RSRALIASSSA
Trigger: GGCACTGGATGATGCAATCAAAGCTCGACTTCTCAATCCCAAGTGGCCAAAGGCATACTTCCGACAGGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397906.6
CDS CAA 72 bp AAGATTGTGGCAGACCTTCCCTTCTCCTTCCATGTCTaGAAGGTCGGGAGCAAGCCGGAGGTACTGTTCATA +
Preference number: 6 (lower is better)
Translates to: KIVADLPFSFHV*KVGSKPEVLFI
Trigger: TATGAACAGTACCTCCGGCTTGCTCCCGACCTTCAAGACATGGAAGGAGAAGGGAAGGTCTGCCACAATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 72 bp CTGATCAATAGTGACTGGGGAGTAGGGGTCGGAGTCTaGTTGTCCTGTTTGTCGTTCCACCAGAAGATCAGC +
Preference number: 6 (lower is better)
Translates to: LINSDWGVGVGV*LSCLSFHQKIS
Trigger: GCTGATCTTCTGGTGGAACGACAAACAGGACAACAAGACTCCGACCCCTACTCCCCAGTCACTATTGATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 72 bp GCCTGCACCTTTTCATCAATGGCTGCCATTTTCAGTTaGTCTATGTCGGGAGCGTCTGCTGGACTTGAGCGA +
Preference number: 6 (lower is better)
Translates to: ACTFSSMAAIFS*SMSGASAGLER
Trigger: TCGCTCAAGTCCAGCAGACGCTCCCGACATAGACAAACTGAAAATGGCAGCCATTGATGAAAAGGTGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 90 bp TTATGGACAGCCTGCACCTTTTCATCAATGGCTGCCATTTTCAGTTaGTCTATGTCGGGAGCGTCTGCTGGACTTGAGCGAGCAGATCCA +
Preference number: 6 (lower is better)
Translates to: LWTACTFSSMAAIFS*SMSGASAGLERADP
Trigger: TGGATCTGCTCGCTCAAGTCCAGCAGACGCTCCCGACATAGACAAACTGAAAATGGCAGCCATTGATGAAAAGGTGCAGGCTGTCCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 72 bp TGGATTGCTTGGCAAGAAGAACACACTGTTTGTGACTaGCCAGTGCATTGGGGTAGTCTCCAATGGCTGTGT +
Preference number: 6 (lower is better)
Translates to: WIAWQEEHTVCD*PVHWGSLQWLC
Trigger: ACACAGCCATTGGAGACTACCCCAATGCACTGGCCAGTCACAAACAGTGTGTTCTTCTTGCCAAGCAATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 72 bp GCTCATGGCACTGCACAGCATTCTCAAAGTCACCCATaGCAATATACACAGCTCCCATGTTGCCAAGTTCTC +
Preference number: 6 (lower is better)
Translates to: AHGTAQHSQSHP*QYTQLPCCQVL
Trigger: GAGAACTTGGCAACATGGGAGCTGTGTATATTGCCATGGGTGACTTTGAGAATGCTGTGCAGTGCCATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 72 bp ATATCGCCCAGGTTTCCTAGGGCTCGAAATTTAGCCTaGGAATTATTCAGAGACTGGGCTAGGGACAGTAGG +
Preference number: 6 (lower is better)
Translates to: ISPRFPRARNLA*ELFRDWARDSR
Trigger: CCTACTGTCCCTAGCCCAGTCTCTGAATAATTCCCAGGCTAAATTTCGAGCCCTAGGAAACCTGGGCGATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 72 bp TCATTCGGTATGCAGTGCCCAGGGCTGCATATGCACTaGCTTCTAATCTTCTGTCCTTTACCTGGTGAGCTA +
Preference number: 6 (lower is better)
Translates to: SFGMQCPGLHMH*LLIFCPLPGEL
Trigger: TAGCTCACCAGGTAAAGGACAGAAGATTAGAAGCCAGTGCATATGCAGCCCTGGGCACTGCATACCGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 72 bp ACCATCCGCAGAAAGCCAGTGGGGTCAGTGACCGAGTaGAGTTTGTTGTTCATCTCTTCAAATTGCTGGTCC +
Preference number: 6 (lower is better)
Translates to: TIRRKPVGSVTE*SLLFISSNCWS
Trigger: GGACCAGCAATTTGAAGAGATGAACAACAAACTCAACTCGGTCACTGACCCCACTGGCTTTCTGCGGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397906.6
ENST00000442232.1
ENST00000612946.4
CDS CAA 90 bp AGTGGGGTCAGTGACCGAGTTGAGTTTGTTGTTCATCTCTTCAAATaGCTGGTCCATGATGTCTCCCGCTTCACTCTCTGTCTCACTGCT +
Preference number: 6 (lower is better)
Translates to: SGVSDRVEFVVHLFK*LVHDVSRFTLCLTA
Trigger: AGCAGTGAGACAGAGAGTGAAGCGGGAGACATCATGGACCAGCAATTTGAAGAGATGAACAACAAACTCAACTCGGTCACTGACCCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397906.6
ENST00000442232.1
ENST00000612946.4
CDS GCA 72 bp GTCTGGTCACCTAAGGTCTTGGCTACATCCAAGTCCTaGTGCATATATCCGGTGCTCTTCTCTGTATTTCCA +
Preference number: 6 (lower is better)
Translates to: VWSPKVLATSKS*CIYPVLFSVFP
Trigger: TGGAAATACAGAGAAGAGCACCGGATATATGCAGCAGGACTTGGATGTAGCCAAGACCTTAGGTGACCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397906.6
ENST00000490475.1
ENST00000612946.4
CDS GCA 72 bp AGGTCCTTGGCTATCTTCAGATGCTGCTCATGGCACTaGACAGCATTCTCAAAGTCACCCATGGCAATATAC +
Preference number: 6 (lower is better)
Translates to: RSLAIFRCCSWH*TAFSKSPMAIY
Trigger: GTATATTGCCATGGGTGACTTTGAGAATGCTGTGCAGTGCCATGAGCAGCATCTGAAGATAGCCAAGGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp ATGTCTGCAGGTCAAAGAGGGAGAGTTTGTAGTCCGTaGTCAGCTGTGCCTCATGTCGGATTGTTTCAAACA +
Preference number: 6 (lower is better)
Translates to: MSAGQRGRVCSP*SAVPHVGLFQT
Trigger: TGTTTGAAACAATCCGACATGAGGCACAGCTGAGCACGGACTACAAACTCTCCCTCTTTGACCTGCAGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 72 bp GTTTGTAGTCCGTGCTCAGCTGTGCCTCATGTCGGATaGTTTCAAACAAGGCTGATGCCCTATAAAGCTGGT +
Preference number: 6 (lower is better)
Translates to: VCSPCSAVPHVG*FQTRLMPYKAG
Trigger: ACCAGCTTTATAGGGCATCAGCCTTGTTTGAAACAATCCGACATGAGGCACAGCTGAGCACGGACTACAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 72 bp ATCAATAGTGACTGGGGAGTAGGGGTCGGAGTCTTGTaGTCCTGTTTGTCGTTCCACCAGAAGATCAGCAAA +
Preference number: 6 (lower is better)
Translates to: INSDWGVGVGVL*SCLSFHQKISK
Trigger: TTTGCTGATCTTCTGGTGGAACGACAAACAGGACAACAAGACTCCGACCCCTACTCCCCAGTCACTATTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 90 bp GACAGCTCCTTCAGTTCAAGCTTATCCACTCCCTCCTCCTTCTTATaGTGCCGTGGTGACAAATTCAACAGACTGAGGACATCCCTTTTG +
Preference number: 6 (lower is better)
Translates to: DSSFSSSLSTPSSFL*CRGDKFNRLRTSLL
Trigger: CAAAAGGGATGTCCTCAGTCTGTTGAATTTGTCACCACGGCACAATAAGAAGGAGGAGGGAGTGGATAAGCTTGAACTGAAGGAGCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 90 bp TGTCGGAAGTATGCCTTTGGCCACTTGGGATTGAGAAGTCGAGCTTaGATTGCATCATCCAGTGCCTTGTCATACTGCTGGATTTTCATG +
Preference number: 6 (lower is better)
Translates to: CRKYAFGHLGLRSRA*IASSSALSYCWIFM
Trigger: CATGAAAATCCAGCAGTATGACAAGGCACTGGATGATGCAATCAAAGCTCGACTTCTCAATCCCAAGTGGCCAAAGGCATACTTCCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397906.6
CDS CAA 90 bp TCCCATGTTGCCAAGTTCTCGGGCTTCAGAAAGTTCATCTTTGGATaGCTTGGCAAGAAGAACACACTGTTTGTGACTGGCCAGTGCATT +
Preference number: 6 (lower is better)
Translates to: SHVAKFSGFRKFIFG*LGKKNTLFVTGQCI
Trigger: AATGCACTGGCCAGTCACAAACAGTGTGTTCTTCTTGCCAAGCAATCCAAAGATGAACTTTCTGAAGCCCGAGAACTTGGCAACATGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 90 bp GTGTCTCCTCCAGAATTTTCTGGGCTAACTCTTGTGGATCCAGTTTaGGGTTGCTTTCTTCTTGGGATTTCACGGTACTGTCCGTTTCTG +
Preference number: 6 (lower is better)
Translates to: VSPPEFSGLTLVDPV*GCFLLGISRYCPFL
Trigger: CAGAAACGGACAGTACCGTGAAATCCCAAGAAGAAAGCAACCCAAAACTGGATCCACAAGAGTTAGCCCAGAAAATTCTGGAGGAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 72 bp CTTATCCACTCCCTCCTCCTTCTTATTGTGCCGTGGTaGCAAATTCAACAGACTGAGGACATCCCTTTTGGA +
Preference number: 6 (lower is better)
Translates to: LIHSLLLLIVPW*QIQQTEDIPFG
Trigger: TCCAAAAGGGATGTCCTCAGTCTGTTGAATTTGTCACCACGGCACAATAAGAAGGAGGAGGGAGTGGATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp GGGATTGAGAAGTCGAGCTTTGATTGCATCATCCAGTaGCTTGTCATACTGCTGGATTTTCATGTAGGCTGC +
Preference number: 6 (lower is better)
Translates to: GIEKSSFDCIIQ*LVILLDFHVGC
Trigger: GCAGCCTACATGAAAATCCAGCAGTATGACAAGGCACTGGATGATGCAATCAAAGCTCGACTTCTCAATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000468807.1
CDS GCA 72 bp TCTTGGCTACATCCAAGTCCTGCTGCATATATCCGGTaGTCTTCTCTGTATTTCCAAGAGACCAGTAAGCAC +
Preference number: 6 (lower is better)
Translates to: SWLHPSPAAYIR*SSLYFQETSKH
Trigger: GTGCTTACTGGTCTCTTGGAAATACAGAGAAGAGCACCGGATATATGCAGCAGGACTTGGATGTAGCCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397906.6
ENST00000490475.1
ENST00000612946.4
CDS GCA 72 bp TGGTCACCTAAGGTCTTGGCTACATCCAAGTCCTGCTaGATATATCCGGTGCTCTTCTCTGTATTTCCAAGA +
Preference number: 6 (lower is better)
Translates to: WSPKVLATSKSC*IYPVLFSVFPR
Trigger: TCTTGGAAATACAGAGAAGAGCACCGGATATATGCAGCAGGACTTGGATGTAGCCAAGACCTTAGGTGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397906.6
ENST00000490475.1
ENST00000612946.4
CDS GCA 72 bp CTGGGCAATGCACAGGTGGGTCTTGTGGAGTTTCAGTaGAGTGTCATAATCACCTTTCATCTGGTGTATGAT +
Preference number: 6 (lower is better)
Translates to: LGNAQVGLVEFQ*SVIITFHLVYD
Trigger: ATCATACACCAGATGAAAGGTGATTATGACACTGCACTGAAACTCCACAAGACCCACCTGTGCATTGCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp TTTAGCCAGTGCCAGATCCTGTTCGTAGTACTTCACTaGCTCCTGATAGTTTCCAAGGCAGTAATGGGCATA +
Preference number: 6 (lower is better)
Translates to: FSQCQILFVVLH*LLIVSKAVMGI
Trigger: TATGCCCATTACTGCCTTGGAAACTATCAGGAGGCAGTGAAGTACTACGAACAGGATCTGGCACTGGCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp GTGACCGAGTTGAGTTTGTTGTTCATCTCTTCAAATTaGTGGTCCATGATGTCTCCCGCTTCACTCTCTGTC +
Preference number: 6 (lower is better)
Translates to: VTELSLLFISSN*WSMMSPASLSV
Trigger: GACAGAGAGTGAAGCGGGAGACATCATGGACCAGCAATTTGAAGAGATGAACAACAAACTCAACTCGGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397906.6
ENST00000442232.1
ENST00000612946.4
CDS GCA 72 bp GTGCTCTGCCAGAACATCTTCAGGTTATGGACAGCCTaGACCTTTTCATCAATGGCTGCCATTTTCAGTTTG +
Preference number: 6 (lower is better)
Translates to: VLCQNIFRLWTA*TFSSMAAIFSL
Trigger: CAAACTGAAAATGGCAGCCATTGATGAAAAGGTGCAGGCTGTCCATAACCTGAAGATGTTCTGGCAGAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 72 bp GCCAAGTTCTCGGGCTTCAGAAAGTTCATCTTTGGATaGCTTGGCAAGAAGAACACACTGTTTGTGACTGGC +
Preference number: 6 (lower is better)
Translates to: AKFSGFRKFIFG*LGKKNTLFVTG
Trigger: GCCAGTCACAAACAGTGTGTTCTTCTTGCCAAGCAATCCAAAGATGAACTTTCTGAAGCCCGAGAACTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 90 bp TCCTCCAGAATTTTCTGGGCTAACTCTTGTGGATCCAGTTTTGGGTaGCTTTCTTCTTGGGATTTCACGGTACTGTCCGTTTCTGTGCTA +
Preference number: 6 (lower is better)
Translates to: SSRIFWANSCGSSFG*LSSWDFTVLSVSVL
Trigger: TAGCACAGAAACGGACAGTACCGTGAAATCCCAAGAAGAAAGCAACCCAAAACTGGATCCACAAGAGTTAGCCCAGAAAATTCTGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp GATTACTCTGACGAACTTTCTCAACAAATTCAGCTTTaGTCAGTACCGGTCCATCAGGACTTCTCTGGCCAA +
Preference number: 6 (lower is better)
Translates to: DYSDELSQQIQL*SVPVHQDFSGQ
Trigger: TTGGCCAGAGAAGTCCTGATGGACCGGTACTGAGCAAAGCTGAATTTGTTGAGAAAGTTCGTCAGAGTAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000468807.1
CDS GCA 72 bp TGGCGAATTTTTGCCTCATCTTCTCTTCGGCCCAGTTaGTCAGCTAACCTTAAACCTTCCTGTAAGTACATG +
Preference number: 6 (lower is better)
Translates to: WRIFASSSLRPS*SANLKPSCKYM
Trigger: CATGTACTTACAGGAAGGTTTAAGGTTAGCTGAGCAACTGGGCCGAAGAGAAGATGAGGCAAAAATTCGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 72 bp TGGGATTTCACGGTACTGTCCGTTTCTGTGCTAGACTaGTCTGATTCTCCTGTATCTGAGCTTGCTAGTTTT +
Preference number: 6 (lower is better)
Translates to: WDFTVLSVSVLD*SDSPVSELASF
Trigger: AAAACTAGCAAGCTCAGATACAGGAGAATCAGACCAGTCTAGCACAGAAACGGACAGTACCGTGAAATCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CCA 72 bp AACTCTTGTGGATCCAGTTTTGGGTTGCTTTCTTCTTaGGATTTCACGGTACTGTCCGTTTCTGTGCTAGAC +
Preference number: 6 (lower is better)
Translates to: NSCGSSFGLLSS*DFTVLSVSVLD
Trigger: GTCTAGCACAGAAACGGACAGTACCGTGAAATCCCAAGAAGAAAGCAACCCAAAACTGGATCCACAAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 72 bp TCAAAGTCACCCATGGCAATATACACAGCTCCCATGTaGCCAAGTTCTCGGGCTTCAGAAAGTTCATCTTTG +
Preference number: 6 (lower is better)
Translates to: SKSPMAIYTAPM*PSSRASESSSL
Trigger: CAAAGATGAACTTTCTGAAGCCCGAGAACTTGGCAACATGGGAGCTGTGTATATTGCCATGGGTGACTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 72 bp TTCAGTTCAAGCTTATCCACTCCCTCCTCCTTCTTATaGTGCCGTGGTGACAAATTCAACAGACTGAGGACA +
Preference number: 6 (lower is better)
Translates to: FSSSLSTPSSFL*CRGDKFNRLRT
Trigger: TGTCCTCAGTCTGTTGAATTTGTCACCACGGCACAATAAGAAGGAGGAGGGAGTGGATAAGCTTGAACTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS TCA 72 bp GCTTTTGCCCTAGATCCAGTTGCTCTTCATAACACTTaGATGCCATTGTGTATTTCCCAAGGGCCATGTAGA +
Preference number: 6 (lower is better)
Translates to: AFALDPVALHNT*MPLCISQGPCR
Trigger: TCTACATGGCCCTTGGGAAATACACAATGGCATTCAAGTGTTATGAAGAGCAACTGGATCTAGGGCAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp TTTTCTGGGCTAACTCTTGTGGATCCAGTTTTGGGTTaGTTTCTTCTTGGGATTTCACGGTACTGTCCGTTT +
Preference number: 6 (lower is better)
Translates to: FSGLTLVDPVLG*FLLGISRYCPF
Trigger: AAACGGACAGTACCGTGAAATCCCAAGAAGAAAGCAACCCAAAACTGGATCCACAAGAGTTAGCCCAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS CAA 72 bp CCAGAATTTTCTGGGCTAACTCTTGTGGATCCAGTTTaGGGTTGCTTTCTTCTTGGGATTTCACGGTACTGT +
Preference number: 6 (lower is better)
Translates to: PEFSGLTLVDPV*GCFLLGISRYC
Trigger: ACAGTACCGTGAAATCCCAAGAAGAAAGCAACCCAAAACTGGATCCACAAGAGTTAGCCCAGAAAATTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000612946.4
CDS GCA 72 bp TTTTCATGTAGGCTGCAGATCTATTGCTGTATAAGATaGAGTTCTGAGGGTCAACAGCCAGGGCTTCATTAT +
Preference number: 6 (lower is better)
Translates to: FSCRLQIYCCIR*SSEGQQPGLHY
Trigger: ATAATGAAGCCCTGGCTGTTGACCCTCAGAACTGCATCTTATACAGCAATAGATCTGCAGCCTACATGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397906.6
ENST00000468807.1