RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTC26 (Homo sapiens)

Ensembl gene IDs: ENSG00000105948

Ensembl transcript IDs: ENST00000343187.8, ENST00000430935.5, ENST00000464848.5, ENST00000468866.1, ENST00000474035.6, ENST00000476296.1, ENST00000478836.6, ENST00000479132.5, ENST00000481482.5, ENST00000495038.5

Found 481 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTCAGTTGTATGTTATAAGAGCTCAGAAGCCTGGGGCTGGAATATaGCTTACGACAGAGAGCCTAGCCATTAGGAGATTCCCTCAAAGG +
Preference number: 1 (lower is better)
Translates to: AQLYVIRAQKPGAGI*LTTESLAIRRFPQR
Trigger: CCTTTGAGGGAATCTCCTAATGGCTAGGCTCTCTGTCGTAAGTCATATTCCAGCCCCAGGCTTCTGAGCTCTTATAACATACAACTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR CCA 90 bp CGGATCATGTATTCTACTTGGGTGTTACCTGTGCTTCTCAGTAAATaGAGCACTTCTCGAAGGGTCTCTTTGGGTTCTCTCCCAGCTATG +
Preference number: 1 (lower is better)
Translates to: RIMYSTWVLPVLLSK*STSRRVSLGSLPAM
Trigger: CATAGCTGGGAGAGAACCCAAAGAGACCCTTCGAGAAGTGCTCCATTTACTGAGAAGCACAGGTAACACCCAAGTAGAATACATGATCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476296.1
3UTR GCA 90 bp AAGGAGATCTTCAGTCATCGATCTCTTCTTGGCTGCTTCCACTCCTaGCATTTTCTCATCTCCTTTCTATACAACTCCTTCATCCACAAG +
Preference number: 1 (lower is better)
Translates to: KEIFSHRSLLGCFHS*HFLISFLYNSFIHK
Trigger: CTTGTGGATGAAGGAGTTGTATAGAAAGGAGATGAGAAAATGGCAGGAGTGGAAGCAGCCAAGAAGAGATCGATGACTGAAGATCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR CCA 90 bp TGCCATTTTCTCATCTCCTTTCTATACAACTCCTTCATCCACAAGTaGAGTGCTGGGATAAATGGAACAACTAATACAGTGCCTACGGGG +
Preference number: 1 (lower is better)
Translates to: CHFLISFLYNSFIHK*SAGINGTTNTVPTG
Trigger: CCCCGTAGGCACTGTATTAGTTGTTCCATTTATCCCAGCACTCCACTTGTGGATGAAGGAGTTGTATAGAAAGGAGATGAGAAAATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR CCA 90 bp TTTTCTTTGGCCCATTTCTTCATGATCCGGATCATGTATTCTACTTaGGTGTTACCTGTGCTTCTCAGTAAATGGAGCACTTCTCGAAGG +
Preference number: 1 (lower is better)
Translates to: FSLAHFFMIRIMYST*VLPVLLSKWSTSRR
Trigger: CCTTCGAGAAGTGCTCCATTTACTGAGAAGCACAGGTAACACCCAAGTAGAATACATGATCCGGATCATGAAGAAATGGGCCAAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476296.1
3UTR TCA 90 bp CGCTATTTTAGATGGACACTCTGTTTTCTTTGGCCCATTTCTTCATaGTCCGGATCATGTATTCTACTTGGGTGTTACCTGTGCTTCTCA +
Preference number: 1 (lower is better)
Translates to: RYFRWTLCFLWPISS*SGSCILLGCYLCFS
Trigger: TGAGAAGCACAGGTAACACCCAAGTAGAATACATGATCCGGATCATGAAGAAATGGGCCAAAGAAAACAGAGTGTCCATCTAAAATAGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476296.1
3UTR GCA 90 bp TCTGCCATTGTAAAGGCGAAAATGGTTACAGGCTTTAAGATTGAGTaGGATGGTACTATCAGGAATTTGCTGAAGGTAAACAGCCAAAAC +
Preference number: 1 (lower is better)
Translates to: SAIVKAKMVTGFKIE*DGTIRNLLKVNSQN
Trigger: GTTTTGGCTGTTTACCTTCAGCAAATTCCTGATAGTACCATCGCACTCAATCTTAAAGCCTGTAACCATTTTCGCCTTTACAATGGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476296.1
3UTR TCA 90 bp ATATATATCTATAGCTTCTTGGTAGTGAGATCGCATATAGTGGATTaGGGCCAAACTGAGTTGATCTTCTGTGACATCCTGAAGATTTTG +
Preference number: 1 (lower is better)
Translates to: IYIYSFLVVRSHIVD*GQTELIFCDILKIL
Trigger: CAAAATCTTCAGGATGTCACAGAAGATCAACTCAGTTTGGCCTCAATCCACTATATGCGATCTCACTACCAAGAAGCTATAGATATATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476296.1
3UTR-3UTR TCA 90 bp TTTGGGAGGCTGAGACGGGCGGATCACGAGGTCAGGAGATGGAGAGCATTGTGGAGGTGGAGCTTGCAGTaGGCCGAGATCGCACCACTG +
Preference number: 2 (lower is better)
Translates to: FGRLRRADHEVRRWRALWRWSLQ*AEIAPL
Trigger: CAGTGGTGCGATCTCGGCTCACTGCAAGCTCCACCT...CCACAATGCTCTCCATCTCCTGACCTCGTGATCCGCCCGTCTCAGCCTCCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR-3UTR GCA 90 bp GAGGCTGAGACGGGCGGATCACGAGGTCAGGAGATGGAGAGCATTGTGGCTAACCCAGGAGGTGGAGCTTaGAGTGAGCCGAGATCGCAC +
Preference number: 2 (lower is better)
Translates to: EAETGGSRGQEMESIVANPGGGA*SEPRSH
Trigger: GTGCGATCTCGGCTCACTGCAAGCTCCACCTCCTGG...GTTAGCCACAATGCTCTCCATCTCCTGACCTCGTGATCCGCCCGTCTCAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR-3UTR TCA 90 bp TGTTATAAGAGCTCAGAAGCCTGGGGCTGGAATATGACTTACGACAGAGAGCCTAGCACTTTGGGAGGCTaGGACGGGCGGATCACGAGG +
Preference number: 2 (lower is better)
Translates to: CYKSSEAWGWNMTYDREPSTLGG*DGRITR
Trigger: CCTCGTGATCCGCCCGTCTCAGCCTCCCAAAGTGCT...AGGCTCTCTGTCGTAAGTCATATTCCAGCCCCAGGCTTCTGAGCTCTTATAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR CAA 90 bp CTCCCAGCTATGATCATCTGGAAAATGCCCACACAGGCACCCCGTTaGCCTTCCCAATATTCAGGGTTAGGATCCAGCCTCTCAAGGACA +
Preference number: 2 (lower is better)
Translates to: LPAMIIWKMPTQAPR*PSQYSGLGSSLSRT
Trigger: TGTCCTTGAGAGGCTGGATCCTAACCCTGAATATTGGGAAGGCAAACGGGGTGCCTGTGTGGGCATTTTCCAGATGATCATAGCTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476296.1
3UTR-3UTR CCA 90 bp CTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACCTTGAGGCTTGTCAAAGTAGAAGCTaGTTCCTAGGACGCTGGCGC +
Preference number: 2 (lower is better)
Translates to: LCSARRLSLSKSVSDLEACQSRS*FLGRWR
Trigger: GCGCCAGCGTCCTAGGAACCAGCTTCTACTTTGACA...AGCCTCAAGGTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
3UTR-3UTR TCA 90 bp GGTCTTCCTCTCTCCTCCATCATCACATGTAAGAAAACCAGCTATGCAATACTAAGCACTTTGGGAGGCTaGGACGGGCGGATCACGAGG +
Preference number: 2 (lower is better)
Translates to: GLPLSSIITCKKTSYAILSTLGG*DGRITR
Trigger: CCTCGTGATCCGCCCGTCTCAGCCTCCCAAAGTGCT...TAGTATTGCATAGCTGGTTTTCTTACATGTGATGATGGAGGAGAGAGGAAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR-3UTR CCA 90 bp ACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACTGTCAAAGTAGAAGCTaGTTCCTAGGACGCTGGCGC +
Preference number: 2 (lower is better)
Translates to: TMALCSARRLSLSKSVSDCQSRS*FLGRWR
Trigger: GCGCCAGCGTCCTAGGAACCAGCTTCTACTTTGACA...GTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
3UTR-3UTR TCA 90 bp TTTGGGAGGCTGAGACGGGCGGATCACGAGGTCAGGAGATGGAGAGCATTGTGGTGCATAAAAGTACTCTaGGCATTTTTGGAAGAAAGG +
Preference number: 2 (lower is better)
Translates to: FGRLRRADHEVRRWRALWCIKVL*AFLEER
Trigger: CCTTTCTTCCAAAAATGCTCAGAGTACTTTTATGCA...CCACAATGCTCTCCATCTCCTGACCTCGTGATCCGCCCGTCTCAGCCTCCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR-3UTR CCA 90 bp CTATACAACTCCTTCATCCACAAGTGGAGTGCTGGGATAAATGGAACAACTAATGCTGAGGCAGGAGACTaGCGTGAACCCAGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: LYNSFIHKWSAGINGTTNAEAGD*REPRRW
Trigger: CCACCTCCTGGGTTCACGCCAGTCTCCTGCCTCAGC...ATTAGTTGTTCCATTTATCCCAGCACTCCACTTGTGGATGAAGGAGTTGTATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR-3UTR GCA 90 bp CCTGTGCTTCTCAGTAAATGGAGCACTTCTCGAAGGGTCTCTTTGGGTTCTCTCCAAGCTTTTGAGTTCTaGCTCAGCTGCTCTGCCATT +
Preference number: 2 (lower is better)
Translates to: PVLLSKWSTSRRVSLGSLQAFEF*LSCSAI
Trigger: AATGGCAGAGCAGCTGAGGCAGAACTCAAAAGCTTG...GAGAGAACCCAAAGAGACCCTTCGAGAAGTGCTCCATTTACTGAGAAGCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476296.1
3UTR-3UTR TCA 90 bp GATGCCAGAAACTGTACATATTTCACTACATGCCTAAGTCTGGGTCTTCCTCTCCCTGGGGCTGGAATATaGCTTACGACAGAGAGCCTA +
Preference number: 2 (lower is better)
Translates to: DARNCTYFTTCLSLGLPLPGAGI*LTTESL
Trigger: TAGGCTCTCTGTCGTAAGTCATATTCCAGCCCCAGG...GAGAGGAAGACCCAGACTTAGGCATGTAGTGAAATATGTACAGTTTCTGGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR-3UTR GCA 90 bp TTCAGGGTTAGGATCCAGCCTCTCAAGGACATCAAAAGCTTTGGCAGAATAGTACGCCCTCACTGGTATTaGCTGTTGCAGCTTTGGCTT +
Preference number: 2 (lower is better)
Translates to: FRVRIQPLKDIKSFGRIVRPHWY*LLQLWL
Trigger: AAGCCAAAGCTGCAACAGGCAATACCAGTGAGGGCG...TACTATTCTGCCAAAGCTTTTGATGTCCTTGAGAGGCTGGATCCTAACCCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476296.1
3UTR-3UTR CCA 90 bp GCAATTCACTGGAAGACAAATTTCACTGCCAAAACCTGCAGACGAGTTCTCCCTCACGAGGTCAGGAGATaGAGAGCATTGTGGCTAACA +
Preference number: 2 (lower is better)
Translates to: AIHWKTNFTAKTCRRVLPHEVRR*RALWLT
Trigger: TGTTAGCCACAATGCTCTCCATCTCCTGACCTCGTG...AGGGAGAACTCGTCTGCAGGTTTTGGCAGTGAAATTTGTCTTCCAGTGAATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR-3UTR CCA 90 bp AGCAATTCACTGGAAGACAAATTTCACTGCCAAAACCTGCAGACGAGTTCTCCCCACGAGGTCAGGAGATaGAGAGCATTGTGGCTAACA +
Preference number: 2 (lower is better)
Translates to: SNSLEDKFHCQNLQTSSPHEVRR*RALWLT
Trigger: TGTTAGCCACAATGCTCTCCATCTCCTGACCTCGTG...GGGAGAACTCGTCTGCAGGTTTTGGCAGTGAAATTTGTCTTCCAGTGAATTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR-3UTR CCA 90 bp GCAATTCACTGGAAGACAAATTTCACTGCCAAAACCTGCAGACGAGTTCTCCCTTCATCGATCTCTTCTTaGCTGCTTCCACTCCTGCCA +
Preference number: 2 (lower is better)
Translates to: AIHWKTNFTAKTCRRVLPSSISS*LLPLLP
Trigger: TGGCAGGAGTGGAAGCAGCCAAGAAGAGATCGATGA...AGGGAGAACTCGTCTGCAGGTTTTGGCAGTGAAATTTGTCTTCCAGTGAATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR-3UTR TCA 90 bp GCCAGAAACTGTACATATTTCACTACATGCCTAAGTCTGGGTCTTCCTCTCTCCGGTGAAATAACCCCTTaGGACAGTCCTGAAGGTGAA +
Preference number: 2 (lower is better)
Translates to: ARNCTYFTTCLSLGLPLSGEITP*DSPEGE
Trigger: TTCACCTTCAGGACTGTCTCAAGGGGTTATTTCACC...GGAGAGAGGAAGACCCAGACTTAGGCATGTAGTGAAATATGTACAGTTTCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR-3UTR GCA 90 bp GCCAGAAACTGTACATATTTCACTACATGCCTAAGTCTGGGTCTTCCTCTCTCCGGCTGCTTCCACTCCTaGCATTTTCTCATCTCCTTT +
Preference number: 2 (lower is better)
Translates to: ARNCTYFTTCLSLGLPLSGCFHS*HFLISF
Trigger: AAAGGAGATGAGAAAATGGCAGGAGTGGAAGCAGCC...GGAGAGAGGAAGACCCAGACTTAGGCATGTAGTGAAATATGTACAGTTTCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR-3UTR CCA 90 bp TCCTTTCTATACAACTCCTTCATCCACAAGTGGAGTGCTGGGATAAATGGAACATGTCAAAGTAGAAGCTaGTTCCTAGGACGCTGGCGC +
Preference number: 2 (lower is better)
Translates to: SFLYNSFIHKWSAGINGTCQSRS*FLGRWR
Trigger: GCGCCAGCGTCCTAGGAACCAGCTTCTACTTTGACA...TGTTCCATTTATCCCAGCACTCCACTTGTGGATGAAGGAGTTGTATAGAAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR-3UTR CCA 90 bp TTTTCATCTTCTCACTTTGGATCAAGAGGAACGCCTCTTCGCCCTCACTGGTATTGGTTCCTAGGACGCTaGCGCTATTTTAGATGGACA +
Preference number: 2 (lower is better)
Translates to: FSSSHFGSRGTPLRPHWYWFLGR*RYFRWT
Trigger: TGTCCATCTAAAATAGCGCCAGCGTCCTAGGAACCA...ATACCAGTGAGGGCGAAGAGGCGTTCCTCTTGATCCAAAGTGAGAAGATGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476296.1
3UTR-3UTR CCA 90 bp AGCAATTCACTGGAAGACAAATTTCACTGCCAAAACCTGCAGACGAGTTCTCCCTCAGAAGCCTGGGGCTaGAATATGACTTACGACAGA +
Preference number: 2 (lower is better)
Translates to: SNSLEDKFHCQNLQTSSPSEAWG*NMTYDR
Trigger: TCTGTCGTAAGTCATATTCCAGCCCCAGGCTTCTGA...GGGAGAACTCGTCTGCAGGTTTTGGCAGTGAAATTTGTCTTCCAGTGAATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR-3UTR CCA 90 bp AAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTTGTCAAAGTAGAAGCTaGTTCCTAGGACGCTGGCGC +
Preference number: 2 (lower is better)
Translates to: KSKILLLLGSYRVTDYGTCQSRS*FLGRWR
Trigger: GCGCCAGCGTCCTAGGAACCAGCTTCTACTTTGACA...AGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
3UTR CAA 90 bp ATCTCCTCCACAGTGAGGAGGGGTTCCCTTGGAGTAAAGCATTACTaGCTGGCGCATCTCCTTTTATTAATCTTTCTAATTGCTGTGATG +
Preference number: 2 (lower is better)
Translates to: ISSTVRRGSLGVKHY*LAHLLLLIFLIAVM
Trigger: CATCACAGCAATTAGAAAGATTAATAAAAGGAGATGCGCCAGCAAGTAATGCTTTACTCCAAGGGAACCCCTCCTCACTGTGGAGGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474035.6
3UTR-3UTR GCA 90 bp GATGCCAGAAACTGTACATATTTCACTACATGCCTAAGTCTGGGTCTTCCTCTCCATCCACAAGTGGAGTaGTGGGATAAATGGAACAAC +
Preference number: 2 (lower is better)
Translates to: DARNCTYFTTCLSLGLPLHPQVE*WDKWNN
Trigger: GTTGTTCCATTTATCCCAGCACTCCACTTGTGGATG...GAGAGGAAGACCCAGACTTAGGCATGTAGTGAAATATGTACAGTTTCTGGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR-3UTR CCA 90 bp GGTCTTCCTCTCTCCTCCATCATCACATGTAAGAAAACCAGCTATGCAATACTATGGTTCCTAGGACGCTaGCGCTATTTTAGATGGACA +
Preference number: 2 (lower is better)
Translates to: GLPLSSIITCKKTSYAILWFLGR*RYFRWT
Trigger: TGTCCATCTAAAATAGCGCCAGCGTCCTAGGAACCA...TAGTATTGCATAGCTGGTTTTCTTACATGTGATGATGGAGGAGAGAGGAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430935.5
3UTR-3UTR CCA 90 bp TCCTTTCTATACAACTCCTTCATCCACAAGTGGAGTGCTGGGATAAATGGAACATCAGAAGCCTGGGGCTaGAATATGACTTACGACAGA +
Preference number: 2 (lower is better)
Translates to: SFLYNSFIHKWSAGINGTSEAWG*NMTYDR
Trigger: TCTGTCGTAAGTCATATTCCAGCCCCAGGCTTCTGA...TGTTCCATTTATCCCAGCACTCCACTTGTGGATGAAGGAGTTGTATAGAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR-3UTR TCA 90 bp GATGCCAGAAACTGTACATATTTCACTACATGCCTAAGTCTGGGTCTTCCTCTCTGGCCCATTTCTTCATaGTCCGGATCATGTATTCTA +
Preference number: 2 (lower is better)
Translates to: DARNCTYFTTCLSLGLPLWPISS*SGSCIL
Trigger: TAGAATACATGATCCGGATCATGAAGAAATGGGCCA...GAGAGGAAGACCCAGACTTAGGCATGTAGTGAAATATGTACAGTTTCTGGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430935.5
3UTR-3UTR CCA 90 bp AGCATTTTTGGAAGAAAGGCACCAGATAAGTCCAAAATCTTATTGCTACTAGGATGTCAAAGTAGAAGCTaGTTCCTAGGACGCTGGCGC +
Preference number: 2 (lower is better)
Translates to: SIFGRKAPDKSKILLLLGCQSRS*FLGRWR
Trigger: GCGCCAGCGTCCTAGGAACCAGCTTCTACTTTGACA...TCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCTTCCAAAAATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
3UTR-3UTR CCA 90 bp AGCATTTTTGGAAGAAAGGCACCAGATAAGTCCAAAATCTTATTGCTACTAGGACAGGGTCACAGACTATaGCACTCTGTTCAGCCAGGA +
Preference number: 2 (lower is better)
Translates to: SIFGRKAPDKSKILLLLGQGHRL*HSVQPG
Trigger: TCCTGGCTGAACAGAGTGCCATAGTCTGTGACCCTG...TCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCTTCCAAAAATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
3UTR-3UTR CCA 90 bp AGCAATTCACTGGAAGACAAATTTCACTGCCAAAACCTGCAGACGAGTTCTCCCTGGCGCTATTTTAGATaGACACTCTGTTTTCTTTGG +
Preference number: 2 (lower is better)
Translates to: SNSLEDKFHCQNLQTSSPWRYFR*TLCFLW
Trigger: CCAAAGAAAACAGAGTGTCCATCTAAAATAGCGCCA...GGGAGAACTCGTCTGCAGGTTTTGGCAGTGAAATTTGTCTTCCAGTGAATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430935.5
3UTR CAA 90 bp CTGAGCATTTTTGGAAGAAAGGCACCAGATAAGTCCAAAATCTTATaGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTC +
Preference number: 2 (lower is better)
Translates to: LSIFGRKAPDKSKIL*LLGSYRVTDYGTLF
Trigger: GAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCTTCCAAAAATGCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
3UTR CAA 90 bp GATGGTACTATCAGGAATTTGCTGAAGGTAAACAGCCAAAACTTCTaGAGACACATCATAGTAATCCAACTTGTAGTAGCAGAGGGCCAC +
Preference number: 2 (lower is better)
Translates to: DGTIRNLLKVNSQNF*RHIIVIQLVVAEGH
Trigger: GTGGCCCTCTGCTACTACAAGTTGGATTACTATGATGTGTCTCAAGAAGTTTTGGCTGTTTACCTTCAGCAAATTCCTGATAGTACCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476296.1
3UTR CAA 90 bp GAACGCCTCTTCGCCCTCACTGGTATTGCCTGTTGCAGCTTTGGCTaGGGCATAATTAAAGTTAAAGATGTCATCATTATAGAAGTAACT +
Preference number: 2 (lower is better)
Translates to: ERLFALTGIACCSFG*GIIKVKDVIIIEVT
Trigger: AGTTACTTCTATAATGATGACATCTTTAACTTTAATTATGCCCAAGCCAAAGCTGCAACAGGCAATACCAGTGAGGGCGAAGAGGCGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476296.1
3UTR-3UTR TCA 90 bp AATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGTGGCCCATTTCTTCATaGTCCGGATCATGTATTCTA +
Preference number: 2 (lower is better)
Translates to: NLIATRIIQGHRLWHSVQWPISS*SGSCIL
Trigger: TAGAATACATGATCCGGATCATGAAGAAATGGGCCA...CTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000476296.1
3UTR-3UTR CCA 90 bp TCAAAGATGTTTGTTATTGCAGCCAGGAGACAATGCCATAAAATGCTAACAAAACAGGGTCACAGACTATaGCACTCTGTTCAGCCAGGA +
Preference number: 2 (lower is better)
Translates to: SKMFVIAARRQCHKMLTKQGHRL*HSVQPG
Trigger: TCCTGGCTGAACAGAGTGCCATAGTCTGTGACCCTG...TTTTGTTAGCATTTTATGGCATTGTCTCCTGGCTGCAATAACAAACATCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
3UTR-3UTR CCA 90 bp AGTTCTCTTCCCATCTATTCTCTTCTAGGTAGGGATGGCTCTGCACTTTCTAGAAATTCCCCAATAAAATaGGATAACGTACAGAGACGC +
Preference number: 2 (lower is better)
Translates to: SSLPIYSLLGRDGSALSRNSPIK*DNVQRR
Trigger: GCGTCTCTGTACGTTATCCCATTTTATTGGGGAATT...TCTAGAAAGTGCAGAGCCATCCCTACCTAGAAGAGAATAGATGGGAAGAGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR-3UTR CCA 90 bp GCCAGAAACTGTACATATTTCACTACATGCCTAAGTCTGGGTCTTCCTCTCTCCATAATAGCAATTCACTaGAAGACAAATTTCACTGCC +
Preference number: 2 (lower is better)
Translates to: ARNCTYFTTCLSLGLPLSIIAIH*KTNFTA
Trigger: GGCAGTGAAATTTGTCTTCCAGTGAATTGCTATTAT...GGAGAGAGGAAGACCCAGACTTAGGCATGTAGTGAAATATGTACAGTTTCTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR-3UTR TCA 90 bp TCCTTTCTATACAACTCCTTCATCCACAAGTGGAGTGCTGGGATAAATGGAACACCCAAGATTCAGAGATaGCGTTATAAAACCCTTTAT +
Preference number: 2 (lower is better)
Translates to: SFLYNSFIHKWSAGINGTPKIQR*RYKTLY
Trigger: ATAAAGGGTTTTATAACGTCATCTCTGAATCTTGGG...TGTTCCATTTATCCCAGCACTCCACTTGTGGATGAAGGAGTTGTATAGAAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR-3UTR GCA 90 bp CTATACAACTCCTTCATCCACAAGTGGAGTGCTGGGATAAATGGAACAACTAATGCAGCCAGGAGACAATaGCATAAAATGCTAACAAAA +
Preference number: 2 (lower is better)
Translates to: LYNSFIHKWSAGINGTTNAARRQ*HKMLTK
Trigger: TTTTGTTAGCATTTTATGGCATTGTCTCCTGGCTGC...ATTAGTTGTTCCATTTATCCCAGCACTCCACTTGTGGATGAAGGAGTTGTATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR CAA 90 bp ATGGTTACAGGCTTTAAGATTGAGTGCGATGGTACTATCAGGAATTaGCTGAAGGTAAACAGCCAAAACTTCTTGAGACACATCATAGTA +
Preference number: 2 (lower is better)
Translates to: MVTGFKIECDGTIRN*LKVNSQNFLRHIIV
Trigger: TACTATGATGTGTCTCAAGAAGTTTTGGCTGTTTACCTTCAGCAAATTCCTGATAGTACCATCGCACTCAATCTTAAAGCCTGTAACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476296.1
3UTR-3UTR TCA 90 bp GAGAGCCTAGCCATTAGGAGATTCCCTCAAAGGACTTTATACGATTCATGTTTTTGCATAAAAGTACTCTaGGCATTTTTGGAAGAAAGG +
Preference number: 2 (lower is better)
Translates to: ESLAIRRFPQRTLYDSCFCIKVL*AFLEER
Trigger: CCTTTCTTCCAAAAATGCTCAGAGTACTTTTATGCA...AAAACATGAATCGTATAAAGTCCTTTGAGGGAATCTCCTAATGGCTAGGCTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR-3UTR TCA 90 bp CTATACAACTCCTTCATCCACAAGTGGAGTGCTGGGATAAATGGAACAACTAATCCCAAGATTCAGAGATaGCGTTATAAAACCCTTTAT +
Preference number: 2 (lower is better)
Translates to: LYNSFIHKWSAGINGTTNPKIQR*RYKTLY
Trigger: ATAAAGGGTTTTATAACGTCATCTCTGAATCTTGGG...ATTAGTTGTTCCATTTATCCCAGCACTCCACTTGTGGATGAAGGAGTTGTATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR-3UTR GCA 90 bp GCTGAGGTAAATGTAATCATTTTTCATCTTCTCACTTTGGATCAAGAGGAACGCGGCTTTAAGATTGAGTaGGATGGTACTATCAGGAAT +
Preference number: 2 (lower is better)
Translates to: AEVNVIIFHLLTLDQEERGFKIE*DGTIRN
Trigger: ATTCCTGATAGTACCATCGCACTCAATCTTAAAGCC...GCGTTCCTCTTGATCCAAAGTGAGAAGATGAAAAATGATTACATTTACCTCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476296.1
3UTR-3UTR CCA 90 bp CGGAAAACAACCAGATTGTGCCTGATGAGTTCTTTAGCAAATTCAAAGGATGAATGGCGCTATTTTAGATaGACACTCTGTTTTCTTTGG +
Preference number: 2 (lower is better)
Translates to: RKTTRLCLMSSLANSKDEWRYFR*TLCFLW
Trigger: CCAAAGAAAACAGAGTGTCCATCTAAAATAGCGCCA...TTCATCCTTTGAATTTGCTAAAGAACTCATCAGGCACAATCTGGTTGTTTTCCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000476296.1
3UTR-3UTR CCA 90 bp CTCTCTCCTCCATCATCACATGTAAGAAAACCAGCTATGCAATACTACTTTGCAATAATAGCAATTCACTaGAAGACAAATTTCACTGCC +
Preference number: 2 (lower is better)
Translates to: LSPPSSHVRKPAMQYYFAIIAIH*KTNFTA
Trigger: GGCAGTGAAATTTGTCTTCCAGTGAATTGCTATTAT...TGCAAAGTAGTATTGCATAGCTGGTTTTCTTACATGTGATGATGGAGGAGAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR-3UTR TCA 90 bp ACATCAAAGATGTTTGTTATTGCAGCCAGGAGACAATGCCATAAAATGCTAACATGCATAAAAGTACTCTaGGCATTTTTGGAAGAAAGG +
Preference number: 2 (lower is better)
Translates to: TSKMFVIAARRQCHKMLTCIKVL*AFLEER
Trigger: CCTTTCTTCCAAAAATGCTCAGAGTACTTTTATGCA...TGTTAGCATTTTATGGCATTGTCTCCTGGCTGCAATAACAAACATCTTTGATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
3UTR TCA 72 bp CTTCTCGAAGGGTCTCTTTGGGTTCTCTCCCAGCTATaGTCATCTGGAAAATGCCCACACAGGCACCCCGTT +
Preference number: 3 (lower is better)
Translates to: LLEGSLWVLSQL*SSGKCPHRHPV
Trigger: AACGGGGTGCCTGTGTGGGCATTTTCCAGATGATCATAGCTGGGAGAGAACCCAAAGAGACCCTTCGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476296.1
3UTR-3UTR CAA 90 bp GAGGCTGAGACGGGCGGATCACGAGGTCAGGAGATGGAGAGCATTGTGGCTAACGAACATCAAAGATGTTaGTTATTGCAGCCAGGAGAC +
Preference number: 3 (lower is better)
Translates to: EAETGGSRGQEMESIVANEHQRC*LLQPGD
Trigger: GTCTCCTGGCTGCAATAACAAACATCTTTGATGTTC...GTTAGCCACAATGCTCTCCATCTCCTGACCTCGTGATCCGCCCGTCTCAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR-3UTR CAA 90 bp GCAATTCACTGGAAGACAAATTTCACTGCCAAAACCTGCAGACGAGTTCTCCCTGTCATCGATCTCTTCTaGGCTGCTTCCACTCCTGCC +
Preference number: 3 (lower is better)
Translates to: AIHWKTNFTAKTCRRVLPVIDLF*AASTPA
Trigger: GGCAGGAGTGGAAGCAGCCAAGAAGAGATCGATGAC...AGGGAGAACTCGTCTGCAGGTTTTGGCAGTGAAATTTGTCTTCCAGTGAATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR CCA 72 bp GAATGCTCAGTTGTATGTTATAAGAGCTCAGAAGCCTaGGGCTGGAATATGACTTACGACAGAGAGCCTAGC +
Preference number: 3 (lower is better)
Translates to: ECSVVCYKSSEA*GWNMTYDREPS
Trigger: GCTAGGCTCTCTGTCGTAAGTCATATTCCAGCCCCAGGCTTCTGAGCTCTTATAACATACAACTGAGCATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR-3UTR CAA 90 bp TTCAGGGTTAGGATCCAGCCTCTCAAGGACATCAAAAGCTTTGGCAGAATAGTAAGTCAGTCTCTGACCTaGAGGCTTAAAGAGCAAGGA +
Preference number: 3 (lower is better)
Translates to: FRVRIQPLKDIKSFGRIVSQSLT*RLKEQG
Trigger: TCCTTGCTCTTTAAGCCTCAAGGTCAGAGACTGACT...TACTATTCTGCCAAAGCTTTTGATGTCCTTGAGAGGCTGGATCCTAACCCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476296.1
3UTR TCA 72 bp TATGTTATAAGAGCTCAGAAGCCTGGGGCTGGAATATaGCTTACGACAGAGAGCCTAGCCATTAGGAGATTC +
Preference number: 3 (lower is better)
Translates to: YVIRAQKPGAGI*LTTESLAIRRF
Trigger: GAATCTCCTAATGGCTAGGCTCTCTGTCGTAAGTCATATTCCAGCCCCAGGCTTCTGAGCTCTTATAACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR CCA 72 bp TATTCTACTTGGGTGTTACCTGTGCTTCTCAGTAAATaGAGCACTTCTCGAAGGGTCTCTTTGGGTTCTCTC +
Preference number: 3 (lower is better)
Translates to: YSTWVLPVLLSK*STSRRVSLGSL
Trigger: GAGAGAACCCAAAGAGACCCTTCGAGAAGTGCTCCATTTACTGAGAAGCACAGGTAACACCCAAGTAGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476296.1
3UTR-3UTR CAA 90 bp GGTCTTCCTCTCTCCTCCATCATCACATGTAAGAAAACCAGCTATGCAATACTAAGTCAGTCTCTGACCTaGAGGCTTAAAGAGCAAGGA +
Preference number: 3 (lower is better)
Translates to: GLPLSSIITCKKTSYAILSQSLT*RLKEQG
Trigger: TCCTTGCTCTTTAAGCCTCAAGGTCAGAGACTGACT...TAGTATTGCATAGCTGGTTTTCTTACATGTGATGATGGAGGAGAGAGGAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR-3UTR CAA 90 bp AATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGAGTCAGTCTCTGACCTaGAGGCTTAAAGAGCAAGGA +
Preference number: 3 (lower is better)
Translates to: NLIATRIIQGHRLWHSVQSQSLT*RLKEQG
Trigger: TCCTTGCTCTTTAAGCCTCAAGGTCAGAGACTGACT...CTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
3UTR-3UTR CAA 90 bp CCTGTGCTTCTCAGTAAATGGAGCACTTCTCGAAGGGTCTCTTTGGGTTCTCTCTTCTTGTACATCATCTaGACGAAGGTAGTAAATCAC +
Preference number: 3 (lower is better)
Translates to: PVLLSKWSTSRRVSLGSLFLYII*TKVVNH
Trigger: GTGATTTACTACCTTCGTCAAGATGATGTACAAGAA...GAGAGAACCCAAAGAGACCCTTCGAGAAGTGCTCCATTTACTGAGAAGCACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476296.1
3UTR CCA 72 bp GCCCATTTCTTCATGATCCGGATCATGTATTCTACTTaGGTGTTACCTGTGCTTCTCAGTAAATGGAGCACT +
Preference number: 3 (lower is better)
Translates to: AHFFMIRIMYST*VLPVLLSKWST
Trigger: AGTGCTCCATTTACTGAGAAGCACAGGTAACACCCAAGTAGAATACATGATCCGGATCATGAAGAAATGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476296.1
3UTR-3UTR CAA 90 bp AGGAAACAGATTAGTACTTTAAAACTTATCTCCTCCACAGTGAGGAGGGGTTCCGGAGTAAAGCATTACTaGCTGGCGCATCTCCTTTTA +
Preference number: 3 (lower is better)
Translates to: RKQISTLKLISSTVRRGSGVKHY*LAHLLL
Trigger: TAAAAGGAGATGCGCCAGCAAGTAATGCTTTACTCC...GGAACCCCTCCTCACTGTGGAGGAGATAAGTTTTAAAGTACTAATCTGTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474035.6
3UTR TCA 72 bp TATAGCTTCTTGGTAGTGAGATCGCATATAGTGGATTaGGGCCAAACTGAGTTGATCTTCTGTGACATCCTG +
Preference number: 3 (lower is better)
Translates to: YSFLVVRSHIVD*GQTELIFCDIL
Trigger: CAGGATGTCACAGAAGATCAACTCAGTTTGGCCTCAATCCACTATATGCGATCTCACTACCAAGAAGCTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476296.1
3UTR GCA 72 bp GCAATTCACTGGAAGACAAATTTCACTGCCAAAACCTaGAGACGAGTTCTCCCTGTCTTTTCTATTACTGTG +
Preference number: 3 (lower is better)
Translates to: AIHWKTNFTAKT*RRVLPVFSITV
Trigger: CACAGTAATAGAAAAGACAGGGAGAACTCGTCTGCAGGTTTTGGCAGTGAAATTTGTCTTCCAGTGAATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR TCA 72 bp ATGGAACAACTAATACAGTGCCTACGGGGATTTTCCTaGCTTCAGTGCTTGAGGAATTCTTTCTTTCAGTTC +
Preference number: 3 (lower is better)
Translates to: MEQLIQCLRGFS*LQCLRNSFFQF
Trigger: GAACTGAAAGAAAGAATTCCTCAAGCACTGAAGTCAGGAAAATCCCCGTAGGCACTGTATTAGTTGTTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR CCA 72 bp CTCATCTCCTTTCTATACAACTCCTTCATCCACAAGTaGAGTGCTGGGATAAATGGAACAACTAATACAGTG +
Preference number: 3 (lower is better)
Translates to: LISFLYNSFIHK*SAGINGTTNTV
Trigger: CACTGTATTAGTTGTTCCATTTATCCCAGCACTCCACTTGTGGATGAAGGAGTTGTATAGAAAGGAGATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR-3UTR CAA 90 bp CGGAAAACAACCAGATTGTGCCTGATGAGTTCTTTAGCAAATTCAAAGGATGAACAAAGATGTTTGTTATaGCAGCCAGGAGACAATGCC +
Preference number: 3 (lower is better)
Translates to: RKTTRLCLMSSLANSKDEQRCLL*QPGDNA
Trigger: GGCATTGTCTCCTGGCTGCAATAACAAACATCTTTG...TTCATCCTTTGAATTTGCTAAAGAACTCATCAGGCACAATCTGGTTGTTTTCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476296.1
3UTR-3UTR CAA 90 bp GCAAATTCAAAGGATGAAGAAGCATTGTCCATCAAGCTTTTGAGTTCTGCCTCAGAACATCAAAGATGTTaGTTATTGCAGCCAGGAGAC +
Preference number: 3 (lower is better)
Translates to: ANSKDEEALSIKLLSSASEHQRC*LLQPGD
Trigger: GTCTCCTGGCTGCAATAACAAACATCTTTGATGTTC...TGAGGCAGAACTCAAAAGCTTGATGGACAATGCTTCTTCATCCTTTGAATTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476296.1
3UTR-3UTR CAA 90 bp TCAAAGATGTTTGTTATTGCAGCCAGGAGACAATGCCATAAAATGCTAACAAAAAGTCAGTCTCTGACCTaGAGGCTTAAAGAGCAAGGA +
Preference number: 3 (lower is better)
Translates to: SKMFVIAARRQCHKMLTKSQSLT*RLKEQG
Trigger: TCCTTGCTCTTTAAGCCTCAAGGTCAGAGACTGACT...TTTTGTTAGCATTTTATGGCATTGTCTCCTGGCTGCAATAACAAACATCTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
3UTR-3UTR CAA 90 bp CGGAAAACAACCAGATTGTGCCTGATGAGTTCTTTAGCAAATTCAAAGGATGAAGGTACTATCAGGAATTaGCTGAAGGTAAACAGCCAA +
Preference number: 3 (lower is better)
Translates to: RKTTRLCLMSSLANSKDEGTIRN*LKVNSQ
Trigger: TTGGCTGTTTACCTTCAGCAAATTCCTGATAGTACC...TTCATCCTTTGAATTTGCTAAAGAACTCATCAGGCACAATCTGGTTGTTTTCCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476296.1
3UTR-3UTR CAA 90 bp GCTGAGGTAAATGTAATCATTTTTCATCTTCTCACTTTGGATCAAGAGGAACGCTTTTCATATGATCCCTaGAACCCATTTCCTGGCCAA +
Preference number: 3 (lower is better)
Translates to: AEVNVIIFHLLTLDQEERFSYDP*NPFPGQ
Trigger: TTGGCCAGGAAATGGGTTCAAGGGATCATATGAAAA...GCGTTCCTCTTGATCCAAAGTGAGAAGATGAAAAATGATTACATTTACCTCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476296.1
3UTR GCA 72 bp GTAAAGGCGAAAATGGTTACAGGCTTTAAGATTGAGTaGGATGGTACTATCAGGAATTTGCTGAAGGTAAAC +
Preference number: 3 (lower is better)
Translates to: VKAKMVTGFKIE*DGTIRNLLKVN
Trigger: GTTTACCTTCAGCAAATTCCTGATAGTACCATCGCACTCAATCTTAAAGCCTGTAACCATTTTCGCCTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476296.1
3UTR-3UTR CAA 90 bp GCTGAGGTAAATGTAATCATTTTTCATCTTCTCACTTTGGATCAAGAGGAACGCAAGGATGAAGAAGCATaGTCCATCAAGCTTTTGAGT +
Preference number: 3 (lower is better)
Translates to: AEVNVIIFHLLTLDQEERKDEEA*SIKLLS
Trigger: ACTCAAAAGCTTGATGGACAATGCTTCTTCATCCTT...GCGTTCCTCTTGATCCAAAGTGAGAAGATGAAAAATGATTACATTTACCTCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476296.1
3UTR-3UTR CAA 90 bp ACATCAAAGATGTTTGTTATTGCAGCCAGGAGACAATGCCATAAAATGCTAACAAAGTCCAAAATCTTATaGCTACTAGGATCATACAGG +
Preference number: 3 (lower is better)
Translates to: TSKMFVIAARRQCHKMLTKSKIL*LLGSYR
Trigger: CCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT...TGTTAGCATTTTATGGCATTGTCTCCTGGCTGCAATAACAAACATCTTTGATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR GCA 90 bp TTTGGGAGGCTGAGACGGGCGGATCACGAGGTCAGGAGATGGAGAGCATTGTGGCCAGGAGGTGGAGCTTaGAGTGAGCCGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: FGRLRRADHEVRRWRALWPGGGA*SEPRSH
Trigger: GTGCGATCTCGGCTCACTGCAAGCTCCACCTCCTGG...CCACAATGCTCTCCATCTCCTGACCTCGTGATCCGCCCGTCTCAGCCTCCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp AGGCTGAGACGGGCGGATCACGAGGTCAGGAGATGGAGAGCATTGTGGCTAACAAGGTGGAGCTTGCAGTaGGCCGAGATCGCACCACTG +
Preference number: 4 (lower is better)
Translates to: RLRRADHEVRRWRALWLTRWSLQ*AEIAPL
Trigger: CAGTGGTGCGATCTCGGCTCACTGCAAGCTCCACCT...TGTTAGCCACAATGCTCTCCATCTCCTGACCTCGTGATCCGCCCGTCTCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp GAGGCTGAGACGGGCGGATCACGAGGTCAGGAGATGGAGAGCATTGTGGCTAACCCTGGGGCTGGAATATaGCTTACGACAGAGAGCCTA +
Preference number: 4 (lower is better)
Translates to: EAETGGSRGQEMESIVANPGAGI*LTTESL
Trigger: TAGGCTCTCTGTCGTAAGTCATATTCCAGCCCCAGG...GTTAGCCACAATGCTCTCCATCTCCTGACCTCGTGATCCGCCCGTCTCAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp TCCTCCACAGTGAGGAGGGGTTCCCTTGGAGTAAAGCATTACTTGCTGGCGCATTTGACGTCGGTCTTGTaGGTCCCCACCACACAGCGA +
Preference number: 4 (lower is better)
Translates to: SSTVRRGSLGVKHYLLAHLTSVL*VPTTQR
Trigger: TCGCTGTGTGGTGGGGACTCACAAGACCGACGTCAA...ATGCGCCAGCAAGTAATGCTTTACTCCAAGGGAACCCCTCCTCACTGTGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS-3UTR GCA 90 bp AGGCTGAGACGGGCGGATCACGAGGTCAGGAGATGGAGAGCATTGTGGCTAACAGAGTTCTGCCTCAGCTaGTCTGCCATTGTAAAGGCG +
Preference number: 4 (lower is better)
Translates to: RLRRADHEVRRWRALWLTEFCLS*SAIVKA
Trigger: CGCCTTTACAATGGCAGAGCAGCTGAGGCAGAACTC...TGTTAGCCACAATGCTCTCCATCTCCTGACCTCGTGATCCGCCCGTCTCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR GCA 90 bp AGGCTGAGACGGGCGGATCACGAGGTCAGGAGATGGAGAGCATTGTGGCTAACACGCCCTCACTGGTATTaGCTGTTGCAGCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: RLRRADHEVRRWRALWLTRPHWY*LLQLWL
Trigger: AAGCCAAAGCTGCAACAGGCAATACCAGTGAGGGCG...TGTTAGCCACAATGCTCTCCATCTCCTGACCTCGTGATCCGCCCGTCTCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CCA 90 bp ACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACGCTGAGGCAGGAGACTaGCGTGAACCCAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TMALCSARRLSLSKSVSDAEAGD*REPRRW
Trigger: CCACCTCCTGGGTTCACGCCAGTCTCCTGCCTCAGC...GTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp AGGCTGAGACGGGCGGATCACGAGGTCAGGAGATGGAGAGCATTGTGGCTAACAAGCAGGTTTGGCCCTTaGAAGCATCATCTTGACGTC +
Preference number: 4 (lower is better)
Translates to: RLRRADHEVRRWRALWLTSRFGP*KHHLDV
Trigger: GACGTCAAGATGATGCTTTCAAGGGCCAAACCTGCT...TGTTAGCCACAATGCTCTCCATCTCCTGACCTCGTGATCCGCCCGTCTCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR GCA 90 bp GAGGCTGAGACGGGCGGATCACGAGGTCAGGAGATGGAGAGCATTGTGGCTAACCTGCCTCAGCTGCTCTaGCATTGTAAAGGCGAAAAT +
Preference number: 4 (lower is better)
Translates to: EAETGGSRGQEMESIVANLPQLL*HCKGEN
Trigger: ATTTTCGCCTTTACAATGGCAGAGCAGCTGAGGCAG...GTTAGCCACAATGCTCTCCATCTCCTGACCTCGTGATCCGCCCGTCTCAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR GCA 90 bp TTTGGGAGGCTGAGACGGGCGGATCACGAGGTCAGGAGATGGAGAGCATTGTGGACTGGTATTGCCTGTTaGAGCTTTGGCTTGGGCATA +
Preference number: 4 (lower is better)
Translates to: FGRLRRADHEVRRWRALWTGIAC*SFGLGI
Trigger: TATGCCCAAGCCAAAGCTGCAACAGGCAATACCAGT...CCACAATGCTCTCCATCTCCTGACCTCGTGATCCGCCCGTCTCAGCCTCCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CCA 90 bp TTTGGGAGGCTGAGACGGGCGGATCACGAGGTCAGGAGATGGAGAGCATTGTGGCCAGCTATGATCATCTaGAAAATGCCCACACAGGCA +
Preference number: 4 (lower is better)
Translates to: FGRLRRADHEVRRWRALWPAMII*KMPTQA
Trigger: TGCCTGTGTGGGCATTTTCCAGATGATCATAGCTGG...CCACAATGCTCTCCATCTCCTGACCTCGTGATCCGCCCGTCTCAGCCTCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464848.5
CDS-3UTR CCA 90 bp AGGCTGAGACGGGCGGATCACGAGGTCAGGAGATGGAGAGCATTGTGGCTAACACACGAGGTCAGGAGATaGAGAGCATTGTGGCTAACA +
Preference number: 4 (lower is better)
Translates to: RLRRADHEVRRWRALWLTHEVRR*RALWLT
Trigger: TGTTAGCCACAATGCTCTCCATCTCCTGACCTCGTG...TGTTAGCCACAATGCTCTCCATCTCCTGACCTCGTGATCCGCCCGTCTCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTTTGACGTCGGTCTTGTaGGTCCCCACCACACAGCGA +
Preference number: 4 (lower is better)
Translates to: QTMALCSARRLSLSKSVSLTSVL*VPTTQR
Trigger: TCGCTGTGTGGTGGGGACTCACAAGACCGACGTCAA...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR TCA 90 bp TTTGGGAGGCTGAGACGGGCGGATCACGAGGTCAGGAGATGGAGAGCATTGTGGTCGCATATAGTGGATTaGGGCCAAACTGAGTTGATC +
Preference number: 4 (lower is better)
Translates to: FGRLRRADHEVRRWRALWSHIVD*GQTELI
Trigger: GATCAACTCAGTTTGGCCTCAATCCACTATATGCGA...CCACAATGCTCTCCATCTCCTGACCTCGTGATCCGCCCGTCTCAGCCTCCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR GCA 90 bp AGGCTGAGACGGGCGGATCACGAGGTCAGGAGATGGAGAGCATTGTGGCTAACACTGCCTCAGCTGCTCTaGCATTGTAAAGGCGAAAAT +
Preference number: 4 (lower is better)
Translates to: RLRRADHEVRRWRALWLTLPQLL*HCKGEN
Trigger: ATTTTCGCCTTTACAATGGCAGAGCAGCTGAGGCAG...TGTTAGCCACAATGCTCTCCATCTCCTGACCTCGTGATCCGCCCGTCTCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CCA 90 bp GCAATTCACTGGAAGACAAATTTCACTGCCAAAACCTGCAGACGAGTTCTCCCTGCTGAGGCAGGAGACTaGCGTGAACCCAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: AIHWKTNFTAKTCRRVLPAEAGD*REPRRW
Trigger: CCACCTCCTGGGTTCACGCCAGTCTCCTGCCTCAGC...AGGGAGAACTCGTCTGCAGGTTTTGGCAGTGAAATTTGTCTTCCAGTGAATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CCA 90 bp AGTTCTCTTCCCATCTATTCTCTTCTAGGTAGGGATGGCTCTGCACTTTCTAGAATTAGCCGGGCGCGGTaGCGGGTGCCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SSLPIYSLLGRDGSALSRISRAR*RVPVVP
Trigger: TGGGACTACAGGCACCCGCCACCGCGCCCGGCTAAT...TCTAGAAAGTGCAGAGCCATCCCTACCTAGAAGAGAATAGATGGGAAGAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp TGTTATAAGAGCTCAGAAGCCTGGGGCTGGAATATGACTTACGACAGAGAGCCTTTGACGTCGGTCTTGTaGGTCCCCACCACACAGCGA +
Preference number: 4 (lower is better)
Translates to: CYKSSEAWGWNMTYDREPLTSVL*VPTTQR
Trigger: TCGCTGTGTGGTGGGGACTCACAAGACCGACGTCAA...AGGCTCTCTGTCGTAAGTCATATTCCAGCCCCAGGCTTCTGAGCTCTTATAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp AGGCTGAGACGGGCGGATCACGAGGTCAGGAGATGGAGAGCATTGTGGCTAACATTTCATATGATCCCTTaGACCCATTTCCTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: RLRRADHEVRRWRALWLTFHMIP*THFLAK
Trigger: CTTGGCCAGGAAATGGGTTCAAGGGATCATATGAAA...TGTTAGCCACAATGCTCTCCATCTCCTGACCTCGTGATCCGCCCGTCTCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp CTCCTCCACAGTGAGGAGGGGTTCCCTTGGAGTAAAGCATTACTTGCTGGCGCATCTTCTTCCCCAACATaGCGTTTGAACTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: LLHSEEGFPWSKALLAGASSSPT*RLNSNR
Trigger: CCTGTTGGAGTTCAAACGTCATGTTGGGGAAGAAGA...TGCGCCAGCAAGTAATGCTTTACTCCAAGGGAACCCCTCCTCACTGTGGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS-3UTR GCA 90 bp ATTGTATCACATTCACTAGCTGATCCTCCCACCAACTGGAAGAACTGCTGGGCATGTGCTGTACGCCTCTaGCTACAGCAGGTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: IVSHSLADPPTNWKNCWACAVRL*LQQVWP
Trigger: GGGCCAAACCTGCTGTAGGCAGAGGCGTACAGCACA...TGCCCAGCAGTTCTTCCAGTTGGTGGGAGGATCAGCTAGTGAATGTGATACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR GCA 90 bp CTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACCTTGAGGCTTTCCTGGCCAAGGGCTaGATTGACCACTCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: LCSARRLSLSKSVSDLEAFLAKG*IDHSFE
Trigger: CTCAAAGGAGTGGTCAATGCAGCCCTTGGCCAGGAA...AGCCTCAAGGTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR GCA 90 bp AGCAATTCACTGGAAGACAAATTTCACTGCCAAAACCTGCAGACGAGTTCTCCCTGTGCTGTACGCCTCTaGCTACAGCAGGTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: SNSLEDKFHCQNLQTSSPCAVRL*LQQVWP
Trigger: GGGCCAAACCTGCTGTAGGCAGAGGCGTACAGCACA...GGGAGAACTCGTCTGCAGGTTTTGGCAGTGAAATTTGTCTTCCAGTGAATTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR GCA 90 bp GAGGCTGAGACGGGCGGATCACGAGGTCAGGAGATGGAGAGCATTGTGGCTAACGGCTTTAAGATTGAGTaGGATGGTACTATCAGGAAT +
Preference number: 4 (lower is better)
Translates to: EAETGGSRGQEMESIVANGFKIE*DGTIRN
Trigger: ATTCCTGATAGTACCATCGCACTCAATCTTAAAGCC...GTTAGCCACAATGCTCTCCATCTCCTGACCTCGTGATCCGCCCGTCTCAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR GCA 90 bp TCCTCCACAGTGAGGAGGGGTTCCCTTGGAGTAAAGCATTACTTGCTGGCGCATCTGCCTCAGCTGCTCTaGCATTGTAAAGGCGAAAAT +
Preference number: 4 (lower is better)
Translates to: SSTVRRGSLGVKHYLLAHLPQLL*HCKGEN
Trigger: ATTTTCGCCTTTACAATGGCAGAGCAGCTGAGGCAG...ATGCGCCAGCAAGTAATGCTTTACTCCAAGGGAACCCCTCCTCACTGTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS-3UTR GCA 90 bp ATCTCCTCCACAGTGAGGAGGGGTTCCCTTGGAGTAAAGCATTACTTGCTGGCGCAAGCTTTTGAGTTCTaGCTCAGCTGCTCTGCCATT +
Preference number: 4 (lower is better)
Translates to: ISSTVRRGSLGVKHYLLAQAFEF*LSCSAI
Trigger: AATGGCAGAGCAGCTGAGGCAGAACTCAAAAGCTTG...CGCCAGCAAGTAATGCTTTACTCCAAGGGAACCCCTCCTCACTGTGGAGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS-3UTR GCA 90 bp ACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACTTCCTGGCCAAGGGCTaGATTGACCACTCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: TMALCSARRLSLSKSVSDFLAKG*IDHSFE
Trigger: CTCAAAGGAGTGGTCAATGCAGCCCTTGGCCAGGAA...GTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR GCA 90 bp CTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACCTTGAGGCTCAGGAAGCCATGCACTaGCTCCCTGGTATTGTATCA +
Preference number: 4 (lower is better)
Translates to: LCSARRLSLSKSVSDLEAQEAMH*LPGIVS
Trigger: TGATACAATACCAGGGAGGCAGTGCATGGCTTCCTG...AGCCTCAAGGTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR GCA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTCGCCCTCACTGGTATTaGCTGTTGCAGCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: QTMALCSARRLSLSKSVSRPHWY*LLQLWL
Trigger: AAGCCAAAGCTGCAACAGGCAATACCAGTGAGGGCG...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR GCA 90 bp ACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACCACAGGCACCCCGTTTaGCTTCCCAATATTCAGGGT +
Preference number: 4 (lower is better)
Translates to: TMALCSARRLSLSKSVSDHRHPV*LPNIQG
Trigger: ACCCTGAATATTGGGAAGGCAAACGGGGTGCCTGTG...GTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR GCA 90 bp AGGCTGAGACGGGCGGATCACGAGGTCAGGAGATGGAGAGCATTGTGGCTAACAGAAGACAAATTTCACTaGCAAAACCTGCAGACGAGT +
Preference number: 4 (lower is better)
Translates to: RLRRADHEVRRWRALWLTEDKFH*QNLQTS
Trigger: ACTCGTCTGCAGGTTTTGGCAGTGAAATTTGTCTTC...TGTTAGCCACAATGCTCTCCATCTCCTGACCTCGTGATCCGCCCGTCTCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR GCA 90 bp TTTGGGAGGCTGAGACGGGCGGATCACGAGGTCAGGAGATGGAGAGCATTGTGGACATATTTCACTACATaGCTAAGTCTGGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: FGRLRRADHEVRRWRALWTYFTT*LSLGLP
Trigger: AGGAAGACCCAGACTTAGGCATGTAGTGAAATATGT...CCACAATGCTCTCCATCTCCTGACCTCGTGATCCGCCCGTCTCAGCCTCCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CCA 90 bp ACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACCTTGAACCCATTTCCTaGCCAAGGGCTGCATTGACC +
Preference number: 4 (lower is better)
Translates to: TMALCSARRLSLSKSVSDLEPIS*PRAALT
Trigger: GGTCAATGCAGCCCTTGGCCAGGAAATGGGTTCAAG...GTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTCTTGAACCCATTTCCTaGCCAAGGGCTGCATTGACC +
Preference number: 4 (lower is better)
Translates to: QTMALCSARRLSLSKSVSLEPIS*PRAALT
Trigger: GGTCAATGCAGCCCTTGGCCAGGAAATGGGTTCAAG...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTCCTCTTCGCCCTCACTaGTATTGCCTGTTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: QTMALCSARRLSLSKSVSPLRPH*YCLLQL
Trigger: AAGCTGCAACAGGCAATACCAGTGAGGGCGAAGAGG...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTTGTCAAAGTAGAAGCTaGTTCCTAGGACGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: QTMALCSARRLSLSKSVSCQSRS*FLGRWR
Trigger: GCGCCAGCGTCCTAGGAACCAGCTTCTACTTTGACA...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp GAGAGCCTAGCCATTAGGAGATTCCCTCAAAGGACTTTATACGATTCATGTTTTATTAGCCGGGCGCGGTaGCGGGTGCCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: ESLAIRRFPQRTLYDSCFISRAR*RVPVVP
Trigger: TGGGACTACAGGCACCCGCCACCGCGCCCGGCTAAT...AAAACATGAATCGTATAAAGTCCTTTGAGGGAATCTCCTAATGGCTAGGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CCA 90 bp TCCACAGTGAGGAGGGGTTCCCTTGGAGTAAAGCATTACTTGCTGGCGCATCTCGAGGAGGGGTTCCCTTaGAGTAAAGCATTACTTGCT +
Preference number: 4 (lower is better)
Translates to: STVRRGSLGVKHYLLAHLEEGFP*SKALLA
Trigger: AGCAAGTAATGCTTTACTCCAAGGGAACCCCTCCTC...GAGATGCGCCAGCAAGTAATGCTTTACTCCAAGGGAACCCCTCCTCACTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474035.6
3UTR CAA 72 bp ATGATCATCTGGAAAATGCCCACACAGGCACCCCGTTaGCCTTCCCAATATTCAGGGTTAGGATCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: MIIWKMPTQAPR*PSQYSGLGSSL
Trigger: GAGGCTGGATCCTAACCCTGAATATTGGGAAGGCAAACGGGGTGCCTGTGTGGGCATTTTCCAGATGATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR TCA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTAGCAGGTTTGGCCCTTaGAAGCATCATCTTGACGTC +
Preference number: 4 (lower is better)
Translates to: QTMALCSARRLSLSKSVSSRFGP*KHHLDV
Trigger: GACGTCAAGATGATGCTTTCAAGGGCCAAACCTGCT...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR TCA 90 bp TCCTCCACAGTGAGGAGGGGTTCCCTTGGAGTAAAGCATTACTTGCTGGCGCATTTGGAGTCGGCTTTTTaGAGCTTTAAATCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SSTVRRGSLGVKHYLLAHLESAF*SFKSSC
Trigger: GCAGCTGGATTTAAAGCTTCAAAAAGCCGACTCCAA...ATGCGCCAGCAAGTAATGCTTTACTCCAAGGGAACCCCTCCTCACTGTGGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS-3UTR TCA 90 bp TCCTCCACAGTGAGGAGGGGTTCCCTTGGAGTAAAGCATTACTTGCTGGCGCATTCATCATTAAACTTGTaGGCCAAGTGGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SSTVRRGSLGVKHYLLAHSSLNL*AKWKRR
Trigger: CCTCCTCTTCCACTTGGCTCACAAGTTTAATGATGA...ATGCGCCAGCAAGTAATGCTTTACTCCAAGGGAACCCCTCCTCACTGTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS-3UTR TCA 90 bp GAGGCTGAGACGGGCGGATCACGAGGTCAGGAGATGGAGAGCATTGTGGCTAACAGCAAATTCAAAGGATaGAGAAGCATTGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: EAETGGSRGQEMESIVANSKFKG*RSIVHQ
Trigger: TTGATGGACAATGCTTCTTCATCCTTTGAATTTGCT...GTTAGCCACAATGCTCTCCATCTCCTGACCTCGTGATCCGCCCGTCTCAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp CTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACCTTGAGGCTGTTCTCTCCCAGCTATaGTCATCTGGAAAATGCCCA +
Preference number: 4 (lower is better)
Translates to: LCSARRLSLSKSVSDLEAVLSQL*SSGKCP
Trigger: TGGGCATTTTCCAGATGATCATAGCTGGGAGAGAAC...AGCCTCAAGGTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR TCA 90 bp CTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACCTTGAGGCTTCTTCTTCCCCAACATaGCGTTTGAACTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: LCSARRLSLSKSVSDLEASSSPT*RLNSNR
Trigger: CCTGTTGGAGTTCAAACGTCATGTTGGGGAAGAAGA...AGCCTCAAGGTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGATCCTCCCACCAACTaGAAGAACTGCTGGGCAATT +
Preference number: 4 (lower is better)
Translates to: QTMALCSARRLSLSKSVSDPPTN*KNCWAI
Trigger: AATTGCCCAGCAGTTCTTCCAGTTGGTGGGAGGATC...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR TCA 90 bp AATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGTTGACGTCGGTCTTGTaGGTCCCCACCACACAGCGA +
Preference number: 4 (lower is better)
Translates to: NLIATRIIQGHRLWHSVQLTSVL*VPTTQR
Trigger: TCGCTGTGTGGTGGGGACTCACAAGACCGACGTCAA...CTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR TCA 90 bp TCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTGACGTCGGTCTTGTaGGTCCCCACCACACAGCGA +
Preference number: 4 (lower is better)
Translates to: SKILLLLGSYRVTDYGTLLTSVL*VPTTQR
Trigger: TCGCTGTGTGGTGGGGACTCACAAGACCGACGTCAA...CAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR TCA 90 bp ACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACTTGAAAGCATCATCTTaGCGTCGGTCTTGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: TMALCSARRLSLSKSVSDLKASS*RRSCES
Trigger: GGACTCACAAGACCGACGTCAAGATGATGCTTTCAA...GTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR TCA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTTTGAAAGCATCATCTTaGCGTCGGTCTTGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: QTMALCSARRLSLSKSVSLKASS*RRSCES
Trigger: GGACTCACAAGACCGACGTCAAGATGATGCTTTCAA...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR TCA 90 bp ATTGTATCACATTCACTAGCTGATCCTCCCACCAACTGGAAGAACTGCTGGGCAAGCAGGTTTGGCCCTTaGAAGCATCATCTTGACGTC +
Preference number: 4 (lower is better)
Translates to: IVSHSLADPPTNWKNCWASRFGP*KHHLDV
Trigger: GACGTCAAGATGATGCTTTCAAGGGCCAAACCTGCT...TGCCCAGCAGTTCTTCCAGTTGGTGGGAGGATCAGCTAGTGAATGTGATACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR TCA 90 bp ACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACTCTTCTTCCCCAACATaGCGTTTGAACTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: TMALCSARRLSLSKSVSDSSSPT*RLNSNR
Trigger: CCTGTTGGAGTTCAAACGTCATGTTGGGGAAGAAGA...GTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR TCA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTTCTTCTTCCCCAACATaGCGTTTGAACTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: QTMALCSARRLSLSKSVSSSSPT*RLNSNR
Trigger: CCTGTTGGAGTTCAAACGTCATGTTGGGGAAGAAGA...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR TCA 90 bp GATGCCAGAAACTGTACATATTTCACTACATGCCTAAGTCTGGGTCTTCCTCTCCCCTACTTTCAAAACTaGTGTTTGGGCCAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: DARNCTYFTTCLSLGLPLPYFQN*CLGQAR
Trigger: CCGCGCCTGGCCCAAACATCAGTTTTGAAAGTAGGG...GAGAGGAAGACCCAGACTTAGGCATGTAGTGAAATATGTACAGTTTCTGGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTTGTCCATCAAGCTTTTaGGTTCTGCCTTGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: QTMALCSARRLSLSKSVSCPSSF*VLPCEP
Trigger: TGGCTCACAAGGCAGAACTCAAAAGCTTGATGGACA...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478836.6
CDS-3UTR GCA 90 bp AATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGTGTGCTGTACGCCTCTaGCTACAGCAGGTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: NLIATRIIQGHRLWHSVQCAVRL*LQQVWP
Trigger: GGGCCAAACCTGCTGTAGGCAGAGGCGTACAGCACA...CTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR GCA 90 bp AGGAAACAGATTAGTACTTTAAAACTTATCTCCTCCACAGTGAGGAGGGGTTCCTGTGCTGTACGCCTCTaGCTACAGCAGGTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: RKQISTLKLISSTVRRGSCAVRL*LQQVWP
Trigger: GGGCCAAACCTGCTGTAGGCAGAGGCGTACAGCACA...GGAACCCCTCCTCACTGTGGAGGAGATAAGTTTTAAAGTACTAATCTGTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS-3UTR GCA 90 bp CTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACCTTGAGGCTCAAGAAAGAAGTAGGTaGAAGCTAGGTTCACCCAGA +
Preference number: 4 (lower is better)
Translates to: LCSARRLSLSKSVSDLEAQERSR*KLGSPR
Trigger: TCTGGGTGAACCTAGCTTGCACCTACTTCTTTCTTG...AGCCTCAAGGTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR GCA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTCTGCCTCAGCTGCTCTaGCATTGTAAAGGCGAAAAT +
Preference number: 4 (lower is better)
Translates to: QTMALCSARRLSLSKSVSLPQLL*HCKGEN
Trigger: ATTTTCGCCTTTACAATGGCAGAGCAGCTGAGGCAG...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
CDS-3UTR GCA 90 bp CTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGCCAGAGTTCTGCCTCAGCTaGTCTGCCATTGTAAAGGCG +
Preference number: 4 (lower is better)
Translates to: LIATRIIQGHRLWHSVQPEFCLS*SAIVKA
Trigger: CGCCTTTACAATGGCAGAGCAGCTGAGGCAGAACTC...TGGCTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
CDS-3UTR GCA 90 bp ACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACACTGGTATTGCCTGTTaGAGCTTTGGCTTGGGCATA +
Preference number: 4 (lower is better)
Translates to: TMALCSARRLSLSKSVSDTGIAC*SFGLGI
Trigger: TATGCCCAAGCCAAAGCTGCAACAGGCAATACCAGT...GTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR GCA 90 bp GCAATTCACTGGAAGACAAATTTCACTGCCAAAACCTGCAGACGAGTTCTCCCTCGCCCTCACTGGTATTaGCTGTTGCAGCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: AIHWKTNFTAKTCRRVLPRPHWY*LLQLWL
Trigger: AAGCCAAAGCTGCAACAGGCAATACCAGTGAGGGCG...AGGGAGAACTCGTCTGCAGGTTTTGGCAGTGAAATTTGTCTTCCAGTGAATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR GCA 90 bp CTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGCCACGCCCTCACTGGTATTaGCTGTTGCAGCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: LIATRIIQGHRLWHSVQPRPHWY*LLQLWL
Trigger: AAGCCAAAGCTGCAACAGGCAATACCAGTGAGGGCG...TGGCTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR GCA 90 bp CTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACCTTGAGGCTCATCCACAAGTGGAGTaGTGGGATAAATGGAACAAC +
Preference number: 4 (lower is better)
Translates to: LCSARRLSLSKSVSDLEAHPQVE*WDKWNN
Trigger: GTTGTTCCATTTATCCCAGCACTCCACTTGTGGATG...AGCCTCAAGGTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR GCA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGGCTGCTTCCACTCCTaGCATTTTCTCATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: QTMALCSARRLSLSKSVSGCFHS*HFLISF
Trigger: AAAGGAGATGAGAAAATGGCAGGAGTGGAAGCAGCC...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CCA 90 bp ACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACAAGAGGAGGCGGTTTTaGAGTCGGCTTTTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: TMALCSARRLSLSKSVSDKRRRF*SRLFEA
Trigger: AGCTTCAAAAAGCCGACTCCAAAACCGCCTCCTCTT...GTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp CTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACCTTGAGGCTCATGCACTGCCTCCCTaGTATTGTATCACATTCACT +
Preference number: 4 (lower is better)
Translates to: LCSARRLSLSKSVSDLEAHALPP*YCITFT
Trigger: AGTGAATGTGATACAATACCAGGGAGGCAGTGCATG...AGCCTCAAGGTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp TTTTCATCTTCTCACTTTGGATCAAGAGGAACGCCTCTTCGCCCTCACTGGTATCCTCTTCGCCCTCACTaGTATTGCCTGTTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: FSSSHFGSRGTPLRPHWYPLRPH*YCLLQL
Trigger: AAGCTGCAACAGGCAATACCAGTGAGGGCGAAGAGG...ATACCAGTGAGGGCGAAGAGGCGTTCCTCTTGATCCAAAGTGAGAAGATGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR CCA 90 bp ACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACCCAGCTATGATCATCTaGAAAATGCCCACACAGGCA +
Preference number: 4 (lower is better)
Translates to: TMALCSARRLSLSKSVSDPAMII*KMPTQA
Trigger: TGCCTGTGTGGGCATTTTCCAGATGATCATAGCTGG...GTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTTGGTTCCTAGGACGCTaGCGCTATTTTAGATGGACA +
Preference number: 4 (lower is better)
Translates to: QTMALCSARRLSLSKSVSWFLGR*RYFRWT
Trigger: TGTCCATCTAAAATAGCGCCAGCGTCCTAGGAACCA...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp TGTTATAAGAGCTCAGAAGCCTGGGGCTGGAATATGACTTACGACAGAGAGCCTCACGAGGTCAGGAGATaGAGAGCATTGTGGCTAACA +
Preference number: 4 (lower is better)
Translates to: CYKSSEAWGWNMTYDREPHEVRR*RALWLT
Trigger: TGTTAGCCACAATGCTCTCCATCTCCTGACCTCGTG...AGGCTCTCTGTCGTAAGTCATATTCCAGCCCCAGGCTTCTGAGCTCTTATAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp GCAATTCACTGGAAGACAAATTTCACTGCCAAAACCTGCAGACGAGTTCTCCCTAGCAGGTTTGGCCCTTaGAAGCATCATCTTGACGTC +
Preference number: 4 (lower is better)
Translates to: AIHWKTNFTAKTCRRVLPSRFGP*KHHLDV
Trigger: GACGTCAAGATGATGCTTTCAAGGGCCAAACCTGCT...AGGGAGAACTCGTCTGCAGGTTTTGGCAGTGAAATTTGTCTTCCAGTGAATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp CTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGCCAAGCAGGTTTGGCCCTTaGAAGCATCATCTTGACGTC +
Preference number: 4 (lower is better)
Translates to: LIATRIIQGHRLWHSVQPSRFGP*KHHLDV
Trigger: GACGTCAAGATGATGCTTTCAAGGGCCAAACCTGCT...TGGCTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR TCA 90 bp ACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACTTGGAGTCGGCTTTTTaGAGCTTTAAATCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TMALCSARRLSLSKSVSDLESAF*SFKSSC
Trigger: GCAGCTGGATTTAAAGCTTCAAAAAGCCGACTCCAA...GTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR TCA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTTTGGAGTCGGCTTTTTaGAGCTTTAAATCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QTMALCSARRLSLSKSVSLESAF*SFKSSC
Trigger: GCAGCTGGATTTAAAGCTTCAAAAAGCCGACTCCAA...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR TCA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTTCATCATTAAACTTGTaGGCCAAGTGGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: QTMALCSARRLSLSKSVSSSLNL*AKWKRR
Trigger: CCTCCTCTTCCACTTGGCTCACAAGTTTAATGATGA...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp CTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACCTTGAGGCTTGGCCCATTTCTTCATaGTCCGGATCATGTATTCTA +
Preference number: 4 (lower is better)
Translates to: LCSARRLSLSKSVSDLEAWPISS*SGSCIL
Trigger: TAGAATACATGATCCGGATCATGAAGAAATGGGCCA...AGCCTCAAGGTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR GCA 90 bp CAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTTGTGCTGTACGCCTCTaGCTACAGCAGGTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: QNLIATRIIQGHRLWHSVCAVRL*LQQVWP
Trigger: GGGCCAAACCTGCTGTAGGCAGAGGCGTACAGCACA...AACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR GCA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTTTTCTTTTGTCAGTGTaGTGTACGCCTCTGCCTACA +
Preference number: 4 (lower is better)
Translates to: QTMALCSARRLSLSKSVSFLLSV*CTPLPT
Trigger: TGTAGGCAGAGGCGTACAGCACACTGACAAAAGAAA...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR GCA 90 bp ACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACCAAGAAAGAAGTAGGTaGAAGCTAGGTTCACCCAGA +
Preference number: 4 (lower is better)
Translates to: TMALCSARRLSLSKSVSDQERSR*KLGSPR
Trigger: TCTGGGTGAACCTAGCTTGCACCTACTTCTTTCTTG...GTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR GCA 90 bp TCCACAGTGAGGAGGGGTTCCCTTGGAGTAAAGCATTACTTGCTGGCGCATCTCGGCTTTAAGATTGAGTaGGATGGTACTATCAGGAAT +
Preference number: 4 (lower is better)
Translates to: STVRRGSLGVKHYLLAHLGFKIE*DGTIRN
Trigger: ATTCCTGATAGTACCATCGCACTCAATCTTAAAGCC...GAGATGCGCCAGCAAGTAATGCTTTACTCCAAGGGAACCCCTCCTCACTGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS-3UTR GCA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTCTTGGGTGTTACCTGTaGTTCTCAGTAAATGGAGCA +
Preference number: 4 (lower is better)
Translates to: QTMALCSARRLSLSKSVSLGCYL*FSVNGA
Trigger: TGCTCCATTTACTGAGAAGCACAGGTAACACCCAAG...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR GCA 90 bp TATAAGAGCTCAGAAGCCTGGGGCTGGAATATGACTTACGACAGAGAGCCTAGCCTTGGGTGTTACCTGTaGTTCTCAGTAAATGGAGCA +
Preference number: 4 (lower is better)
Translates to: YKSSEAWGWNMTYDREPSLGCYL*FSVNGA
Trigger: TGCTCCATTTACTGAGAAGCACAGGTAACACCCAAG...GCTAGGCTCTCTGTCGTAAGTCATATTCCAGCCCCAGGCTTCTGAGCTCTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR GCA 90 bp CCTGTGCTTCTCAGTAAATGGAGCACTTCTCGAAGGGTCTCTTTGGGTTCTCTCCTTGGGTGTTACCTGTaGTTCTCAGTAAATGGAGCA +
Preference number: 4 (lower is better)
Translates to: PVLLSKWSTSRRVSLGSLLGCYL*FSVNGA
Trigger: TGCTCCATTTACTGAGAAGCACAGGTAACACCCAAG...GAGAGAACCCAAAGAGACCCTTCGAGAAGTGCTCCATTTACTGAGAAGCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR CCA 90 bp GATGCCAGAAACTGTACATATTTCACTACATGCCTAAGTCTGGGTCTTCCTCTCCTTGAACCCATTTCCTaGCCAAGGGCTGCATTGACC +
Preference number: 4 (lower is better)
Translates to: DARNCTYFTTCLSLGLPLLEPIS*PRAALT
Trigger: GGTCAATGCAGCCCTTGGCCAGGAAATGGGTTCAAG...GAGAGGAAGACCCAGACTTAGGCATGTAGTGAAATATGTACAGTTTCTGGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CCA 90 bp AGCAATTCACTGGAAGACAAATTTCACTGCCAAAACCTGCAGACGAGTTCTCCCGATCCTCCCACCAACTaGAAGAACTGCTGGGCAATT +
Preference number: 4 (lower is better)
Translates to: SNSLEDKFHCQNLQTSSPDPPTN*KNCWAI
Trigger: AATTGCCCAGCAGTTCTTCCAGTTGGTGGGAGGATC...GGGAGAACTCGTCTGCAGGTTTTGGCAGTGAAATTTGTCTTCCAGTGAATTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CCA 90 bp CTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGCCAGATCCTCCCACCAACTaGAAGAACTGCTGGGCAATT +
Preference number: 4 (lower is better)
Translates to: LIATRIIQGHRLWHSVQPDPPTN*KNCWAI
Trigger: AATTGCCCAGCAGTTCTTCCAGTTGGTGGGAGGATC...TGGCTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp ACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACCATGCACTGCCTCCCTaGTATTGTATCACATTCACT +
Preference number: 4 (lower is better)
Translates to: TMALCSARRLSLSKSVSDHALPP*YCITFT
Trigger: AGTGAATGTGATACAATACCAGGGAGGCAGTGCATG...GTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTCATGCACTGCCTCCCTaGTATTGTATCACATTCACT +
Preference number: 4 (lower is better)
Translates to: QTMALCSARRLSLSKSVSHALPP*YCITFT
Trigger: AGTGAATGTGATACAATACCAGGGAGGCAGTGCATG...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp GATGCCAGAAACTGTACATATTTCACTACATGCCTAAGTCTGGGTCTTCCTCTCCAGGGTCACAGACTATaGCACTCTGTTCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: DARNCTYFTTCLSLGLPLQGHRL*HSVQPG
Trigger: TCCTGGCTGAACAGAGTGCCATAGTCTGTGACCCTG...GAGAGGAAGACCCAGACTTAGGCATGTAGTGAAATATGTACAGTTTCTGGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CCA 90 bp ACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACTCCTTCATCCACAAGTaGAGTGCTGGGATAAATGGA +
Preference number: 4 (lower is better)
Translates to: TMALCSARRLSLSKSVSDSFIHK*SAGING
Trigger: TCCATTTATCCCAGCACTCCACTTGTGGATGAAGGA...GTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp TTTTCATCTTCTCACTTTGGATCAAGAGGAACGCCTCTTCGCCCTCACTGGTATTTGAAAGCATCATCTTaGCGTCGGTCTTGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: FSSSHFGSRGTPLRPHWYLKASS*RRSCES
Trigger: GGACTCACAAGACCGACGTCAAGATGATGCTTTCAA...ATACCAGTGAGGGCGAAGAGGCGTTCCTCTTGATCCAAAGTGAGAAGATGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR TCA 90 bp CTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACCTTGAGGCTACCGAGCTAACCAGCTaGGGTAAATGTAATCATTTT +
Preference number: 4 (lower is better)
Translates to: LCSARRLSLSKSVSDLEATELTS*GKCNHF
Trigger: AAAATGATTACATTTACCTCAGCTGGTTAGCTCGGT...AGCCTCAAGGTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR TCA 90 bp TTTTCATCTTCTCACTTTGGATCAAGAGGAACGCCTCTTCGCCCTCACTGGTATGTTCTCTCCCAGCTATaGTCATCTGGAAAATGCCCA +
Preference number: 4 (lower is better)
Translates to: FSSSHFGSRGTPLRPHWYVLSQL*SSGKCP
Trigger: TGGGCATTTTCCAGATGATCATAGCTGGGAGAGAAC...ATACCAGTGAGGGCGAAGAGGCGTTCCTCTTGATCCAAAGTGAGAAGATGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR TCA 90 bp CTCTCTCCTCCATCATCACATGTAAGAAAACCAGCTATGCAATACTACTTTGCACCCTACTTTCAAAACTaGTGTTTGGGCCAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: LSPPSSHVRKPAMQYYFAPYFQN*CLGQAR
Trigger: CCGCGCCTGGCCCAAACATCAGTTTTGAAAGTAGGG...TGCAAAGTAGTATTGCATAGCTGGTTTTCTTACATGTGATGATGGAGGAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp CTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGCCAGGTGAAATAACCCCTTaGGACAGTCCTGAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: LIATRIIQGHRLWHSVQPGEITP*DSPEGE
Trigger: TTCACCTTCAGGACTGTCTCAAGGGGTTATTTCACC...TGGCTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp ACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACAAAGTAGGAACAACATaGGGAAACAGAAGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: TMALCSARRLSLSKSVSDKVGTT*GNRSFG
Trigger: GCCAAAGCTTCTGTTTCCTCATGTTGTTCCTACTTT...GTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR GCA 90 bp CTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACCTTGAGGCTGGCTTTAAGATTGAGTaGGATGGTACTATCAGGAAT +
Preference number: 4 (lower is better)
Translates to: LCSARRLSLSKSVSDLEAGFKIE*DGTIRN
Trigger: ATTCCTGATAGTACCATCGCACTCAATCTTAAAGCC...AGCCTCAAGGTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
CDS-3UTR GCA 90 bp GGTCTTCCTCTCTCCTCCATCATCACATGTAAGAAAACCAGCTATGCAATACTAGAGTTCTGCCTCAGCTaGTCTGCCATTGTAAAGGCG +
Preference number: 4 (lower is better)
Translates to: GLPLSSIITCKKTSYAILEFCLS*SAIVKA
Trigger: CGCCTTTACAATGGCAGAGCAGCTGAGGCAGAACTC...TAGTATTGCATAGCTGGTTTTCTTACATGTGATGATGGAGGAGAGAGGAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR GCA 90 bp TCCTTTCTATACAACTCCTTCATCCACAAGTGGAGTGCTGGGATAAATGGAACATTCCTGGCCAAGGGCTaGATTGACCACTCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: SFLYNSFIHKWSAGINGTFLAKG*IDHSFE
Trigger: CTCAAAGGAGTGGTCAATGCAGCCCTTGGCCAGGAA...TGTTCCATTTATCCCAGCACTCCACTTGTGGATGAAGGAGTTGTATAGAAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR GCA 90 bp TCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCCTGGCCAAGGGCTaGATTGACCACTCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: SKILLLLGSYRVTDYGTLFLAKG*IDHSFE
Trigger: CTCAAAGGAGTGGTCAATGCAGCCCTTGGCCAGGAA...CAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR GCA 90 bp AATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGCGCCCTCACTGGTATTaGCTGTTGCAGCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: NLIATRIIQGHRLWHSVQRPHWY*LLQLWL
Trigger: AAGCCAAAGCTGCAACAGGCAATACCAGTGAGGGCG...CTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR GCA 90 bp AATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGCACAGGCACCCCGTTTaGCTTCCCAATATTCAGGGT +
Preference number: 4 (lower is better)
Translates to: NLIATRIIQGHRLWHSVQHRHPV*LPNIQG
Trigger: ACCCTGAATATTGGGAAGGCAAACGGGGTGCCTGTG...CTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR GCA 90 bp TCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGCACAGGCACCCCGTTTaGCTTCCCAATATTCAGGGT +
Preference number: 4 (lower is better)
Translates to: SKILLLLGSYRVTDYGTLHRHPV*LPNIQG
Trigger: ACCCTGAATATTGGGAAGGCAAACGGGGTGCCTGTG...CAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR GCA 90 bp AGTTCTCTTCCCATCTATTCTCTTCTAGGTAGGGATGGCTCTGCACTTTCTAGATTCACTGCCAAAACCTaGAGACGAGTTCTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: SSLPIYSLLGRDGSALSRFTAKT*RRVLPV
Trigger: GACAGGGAGAACTCGTCTGCAGGTTTTGGCAGTGAA...TCTAGAAAGTGCAGAGCCATCCCTACCTAGAAGAGAATAGATGGGAAGAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CCA 90 bp CTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGCCAAAGAGGAGGCGGTTTTaGAGTCGGCTTTTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: LIATRIIQGHRLWHSVQPKRRRF*SRLFEA
Trigger: AGCTTCAAAAAGCCGACTCCAAAACCGCCTCCTCTT...TGGCTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp AATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGCTTGAACCCATTTCCTaGCCAAGGGCTGCATTGACC +
Preference number: 4 (lower is better)
Translates to: NLIATRIIQGHRLWHSVQLEPIS*PRAALT
Trigger: GGTCAATGCAGCCCTTGGCCAGGAAATGGGTTCAAG...CTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp AATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGCCTCTTCGCCCTCACTaGTATTGCCTGTTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: NLIATRIIQGHRLWHSVQPLRPH*YCLLQL
Trigger: AAGCTGCAACAGGCAATACCAGTGAGGGCGAAGAGG...CTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp TCCTTTCTATACAACTCCTTCATCCACAAGTGGAGTGCTGGGATAAATGGAACACCTCTTCGCCCTCACTaGTATTGCCTGTTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: SFLYNSFIHKWSAGINGTPLRPH*YCLLQL
Trigger: AAGCTGCAACAGGCAATACCAGTGAGGGCGAAGAGG...TGTTCCATTTATCCCAGCACTCCACTTGTGGATGAAGGAGTTGTATAGAAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CCA 90 bp CTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGCCACCAGCTATGATCATCTaGAAAATGCCCACACAGGCA +
Preference number: 4 (lower is better)
Translates to: LIATRIIQGHRLWHSVQPPAMII*KMPTQA
Trigger: TGCCTGTGTGGGCATTTTCCAGATGATCATAGCTGG...TGGCTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp CTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACCTTGAGGCTATCATGTATTCTACTTaGGTGTTACCTGTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LCSARRLSLSKSVSDLEAIMYST*VLPVLL
Trigger: GAGAAGCACAGGTAACACCCAAGTAGAATACATGAT...AGCCTCAAGGTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp CTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACCTTGAGGCTTGGCGCTATTTTAGATaGACACTCTGTTTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LCSARRLSLSKSVSDLEAWRYFR*TLCFLW
Trigger: CCAAAGAAAACAGAGTGTCCATCTAAAATAGCGCCA...AGCCTCAAGGTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp AATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGTGTCAAAGTAGAAGCTaGTTCCTAGGACGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: NLIATRIIQGHRLWHSVQCQSRS*FLGRWR
Trigger: GCGCCAGCGTCCTAGGAACCAGCTTCTACTTTGACA...CTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp TCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTGTCAAAGTAGAAGCTaGTTCCTAGGACGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: SKILLLLGSYRVTDYGTLCQSRS*FLGRWR
Trigger: GCGCCAGCGTCCTAGGAACCAGCTTCTACTTTGACA...CAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp AGCAATTCACTGGAAGACAAATTTCACTGCCAAAACCTGCAGACGAGTTCTCCCAAGAGCTCAGAAGCCTaGGGCTGGAATATGACTTAC +
Preference number: 4 (lower is better)
Translates to: SNSLEDKFHCQNLQTSSPKSSEA*GWNMTY
Trigger: GTAAGTCATATTCCAGCCCCAGGCTTCTGAGCTCTT...GGGAGAACTCGTCTGCAGGTTTTGGCAGTGAAATTTGTCTTCCAGTGAATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp TCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGAGCAGGTTTGGCCCTTaGAAGCATCATCTTGACGTC +
Preference number: 4 (lower is better)
Translates to: SKILLLLGSYRVTDYGTLSRFGP*KHHLDV
Trigger: GACGTCAAGATGATGCTTTCAAGGGCCAAACCTGCT...CAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR TCA 90 bp CTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGCCATTGGAGTCGGCTTTTTaGAGCTTTAAATCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LIATRIIQGHRLWHSVQPLESAF*SFKSSC
Trigger: GCAGCTGGATTTAAAGCTTCAAAAAGCCGACTCCAA...TGGCTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR TCA 90 bp CTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGCCATTTCATATGATCCCTTaGACCCATTTCCTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: LIATRIIQGHRLWHSVQPFHMIP*THFLAK
Trigger: CTTGGCCAGGAAATGGGTTCAAGGGATCATATGAAA...TGGCTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR TCA 90 bp TCAAAGATGTTTGTTATTGCAGCCAGGAGACAATGCCATAAAATGCTAACAAAAAGGTGGAGCTTGCAGTaGGCCGAGATCGCACCACTG +
Preference number: 4 (lower is better)
Translates to: SKMFVIAARRQCHKMLTKRWSLQ*AEIAPL
Trigger: CAGTGGTGCGATCTCGGCTCACTGCAAGCTCCACCT...TTTTGTTAGCATTTTATGGCATTGTCTCCTGGCTGCAATAACAAACATCTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp AGAAAGGCACCAGATAAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCCCTGGGGCTGGAATATaGCTTACGACAGAGAGCCTA +
Preference number: 4 (lower is better)
Translates to: RKAPDKSKILLLLGSYRVPGAGI*LTTESL
Trigger: TAGGCTCTCTGTCGTAAGTCATATTCCAGCCCCAGG...GACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp AAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTTTGAGTTCTGCCTTGTaGGCCAAGTGGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: KSKILLLLGSYRVTDYGTLSSAL*AKWKRR
Trigger: CCTCCTCTTCCACTTGGCTCACAAGGCAGAACTCAA...AGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478836.6
CDS-3UTR TCA 90 bp CAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCGGAAAACAACCTTGTaGGCCAAGTGGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: QNLIATRIIQGHRLWHSVRKTTL*AKWKRR
Trigger: CCTCCTCTTCCACTTGGCTCACAAGGTTGTTTTCCG...AACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495038.5
CDS-3UTR GCA 90 bp GCCAGAAACTGTACATATTTCACTACATGCCTAAGTCTGGGTCTTCCTCTCTCCCAAGAAAGAAGTAGGTaGAAGCTAGGTTCACCCAGA +
Preference number: 4 (lower is better)
Translates to: ARNCTYFTTCLSLGLPLSQERSR*KLGSPR
Trigger: TCTGGGTGAACCTAGCTTGCACCTACTTCTTTCTTG...GGAGAGAGGAAGACCCAGACTTAGGCATGTAGTGAAATATGTACAGTTTCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR GCA 90 bp AGTTCTCTTCCCATCTATTCTCTTCTAGGTAGGGATGGCTCTGCACTTTCTAGACAAGCTTTTGAGTTCTaGCTCAGCTGCTCTGCCATT +
Preference number: 4 (lower is better)
Translates to: SSLPIYSLLGRDGSALSRQAFEF*LSCSAI
Trigger: AATGGCAGAGCAGCTGAGGCAGAACTCAAAAGCTTG...TCTAGAAAGTGCAGAGCCATCCCTACCTAGAAGAGAATAGATGGGAAGAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR GCA 90 bp AAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCGCCCTCACTGGTATTaGCTGTTGCAGCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: KSKILLLLGSYRVTDYGTRPHWY*LLQLWL
Trigger: AAGCCAAAGCTGCAACAGGCAATACCAGTGAGGGCG...AGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR GCA 90 bp GAGAGCCTAGCCATTAGGAGATTCCCTCAAAGGACTTTATACGATTCATGTTTTCACAGGCACCCCGTTTaGCTTCCCAATATTCAGGGT +
Preference number: 4 (lower is better)
Translates to: ESLAIRRFPQRTLYDSCFHRHPV*LPNIQG
Trigger: ACCCTGAATATTGGGAAGGCAAACGGGGTGCCTGTG...AAAACATGAATCGTATAAAGTCCTTTGAGGGAATCTCCTAATGGCTAGGCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464848.5
CDS-3UTR GCA 90 bp CTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGCCACTTGGGTGTTACCTGTaGTTCTCAGTAAATGGAGCA +
Preference number: 4 (lower is better)
Translates to: LIATRIIQGHRLWHSVQPLGCYL*FSVNGA
Trigger: TGCTCCATTTACTGAGAAGCACAGGTAACACCCAAG...TGGCTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR GCA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGCAGCCAGGAGACAATaGCATAAAATGCTAACAAAA +
Preference number: 4 (lower is better)
Translates to: QTMALCSARRLSLSKSVSAARRQ*HKMLTK
Trigger: TTTTGTTAGCATTTTATGGCATTGTCTCCTGGCTGC...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR CCA 90 bp GAGAGCCTAGCCATTAGGAGATTCCCTCAAAGGACTTTATACGATTCATGTTTTCTTGAACCCATTTCCTaGCCAAGGGCTGCATTGACC +
Preference number: 4 (lower is better)
Translates to: ESLAIRRFPQRTLYDSCFLEPIS*PRAALT
Trigger: GGTCAATGCAGCCCTTGGCCAGGAAATGGGTTCAAG...AAAACATGAATCGTATAAAGTCCTTTGAGGGAATCTCCTAATGGCTAGGCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CCA 90 bp AGAAAGGCACCAGATAAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCCTTGAACCCATTTCCTaGCCAAGGGCTGCATTGACC +
Preference number: 4 (lower is better)
Translates to: RKAPDKSKILLLLGSYRVLEPIS*PRAALT
Trigger: GGTCAATGCAGCCCTTGGCCAGGAAATGGGTTCAAG...GACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR CCA 90 bp TCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGGATCCTCCCACCAACTaGAAGAACTGCTGGGCAATT +
Preference number: 4 (lower is better)
Translates to: SKILLLLGSYRVTDYGTLDPPTN*KNCWAI
Trigger: AATTGCCCAGCAGTTCTTCCAGTTGGTGGGAGGATC...CAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp AATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGGATCCTCCCACCAACTaGAAGAACTGCTGGGCAATT +
Preference number: 4 (lower is better)
Translates to: NLIATRIIQGHRLWHSVQDPPTN*KNCWAI
Trigger: AATTGCCCAGCAGTTCTTCCAGTTGGTGGGAGGATC...CTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp CTCTCTCCTCCATCATCACATGTAAGAAAACCAGCTATGCAATACTACTTTGCACCTCTTCGCCCTCACTaGTATTGCCTGTTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: LSPPSSHVRKPAMQYYFAPLRPH*YCLLQL
Trigger: AAGCTGCAACAGGCAATACCAGTGAGGGCGAAGAGG...TGCAAAGTAGTATTGCATAGCTGGTTTTCTTACATGTGATGATGGAGGAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CCA 90 bp AAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCCTCTTCGCCCTCACTaGTATTGCCTGTTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: KSKILLLLGSYRVTDYGTPLRPH*YCLLQL
Trigger: AAGCTGCAACAGGCAATACCAGTGAGGGCGAAGAGG...AGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp ACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACATCATGTATTCTACTTaGGTGTTACCTGTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TMALCSARRLSLSKSVSDIMYST*VLPVLL
Trigger: GAGAAGCACAGGTAACACCCAAGTAGAATACATGAT...GTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp CCTGTGCTTCTCAGTAAATGGAGCACTTCTCGAAGGGTCTCTTTGGGTTCTCTCTGGCGCTATTTTAGATaGACACTCTGTTTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: PVLLSKWSTSRRVSLGSLWRYFR*TLCFLW
Trigger: CCAAAGAAAACAGAGTGTCCATCTAAAATAGCGCCA...GAGAGAACCCAAAGAGACCCTTCGAGAAGTGCTCCATTTACTGAGAAGCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR CCA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTTGGCGCTATTTTAGATaGACACTCTGTTTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: QTMALCSARRLSLSKSVSWRYFR*TLCFLW
Trigger: CCAAAGAAAACAGAGTGTCCATCTAAAATAGCGCCA...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp AGAAAGGCACCAGATAAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCCAGGGTCACAGACTATaGCACTCTGTTCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RKAPDKSKILLLLGSYRVQGHRL*HSVQPG
Trigger: TCCTGGCTGAACAGAGTGCCATAGTCTGTGACCCTG...GACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR CCA 90 bp AAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCAGGGTCACAGACTATaGCACTCTGTTCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: KSKILLLLGSYRVTDYGTQGHRL*HSVQPG
Trigger: TCCTGGCTGAACAGAGTGCCATAGTCTGTGACCCTG...AGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp CAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGGGTCACAGACTATaGCACTCTGTTCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: QNLIATRIIQGHRLWHSVQGHRL*HSVQPG
Trigger: TCCTGGCTGAACAGAGTGCCATAGTCTGTGACCCTG...AACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTAATTCCCCAATAAAATaGGATAACGTACAGAGACGC +
Preference number: 4 (lower is better)
Translates to: QTMALCSARRLSLSKSVSNSPIK*DNVQRR
Trigger: GCGTCTCTGTACGTTATCCCATTTTATTGGGGAATT...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
CDS-3UTR TCA 90 bp TCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTGAAAGCATCATCTTaGCGTCGGTCTTGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: SKILLLLGSYRVTDYGTLLKASS*RRSCES
Trigger: GGACTCACAAGACCGACGTCAAGATGATGCTTTCAA...CAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR TCA 90 bp AAACAGATTAGTACTTTAAAACTTATCTCCTCCACAGTGAGGAGGGGTTCCCTTAGCAGGTTTGGCCCTTaGAAGCATCATCTTGACGTC +
Preference number: 4 (lower is better)
Translates to: KQISTLKLISSTVRRGSLSRFGP*KHHLDV
Trigger: GACGTCAAGATGATGCTTTCAAGGGCCAAACCTGCT...AAGGGAACCCCTCCTCACTGTGGAGGAGATAAGTTTTAAAGTACTAATCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS-3UTR TCA 90 bp GATGCCAGAAACTGTACATATTTCACTACATGCCTAAGTCTGGGTCTTCCTCTCTCGCATATAGTGGATTaGGGCCAAACTGAGTTGATC +
Preference number: 4 (lower is better)
Translates to: DARNCTYFTTCLSLGLPLSHIVD*GQTELI
Trigger: GATCAACTCAGTTTGGCCTCAATCCACTATATGCGA...GAGAGGAAGACCCAGACTTAGGCATGTAGTGAAATATGTACAGTTTCTGGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp AGTGCTGGGATAAATGGAACAACTAATACAGTGCCTACGGGGATTTTCCTGACTTTTCATATGATCCCTTaGACCCATTTCCTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: SAGINGTTNTVPTGIFLTFHMIP*THFLAK
Trigger: CTTGGCCAGGAAATGGGTTCAAGGGATCATATGAAA...AGTCAGGAAAATCCCCGTAGGCACTGTATTAGTTGTTCCATTTATCCCAGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp CTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGCCATGGCCCATTTCTTCATaGTCCGGATCATGTATTCTA +
Preference number: 4 (lower is better)
Translates to: LIATRIIQGHRLWHSVQPWPISS*SGSCIL
Trigger: TAGAATACATGATCCGGATCATGAAGAAATGGGCCA...TGGCTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR TCA 90 bp AATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGTCTTCTTCCCCAACATaGCGTTTGAACTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: NLIATRIIQGHRLWHSVQSSSPT*RLNSNR
Trigger: CCTGTTGGAGTTCAAACGTCATGTTGGGGAAGAAGA...CTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR TCA 90 bp GGTCTTCCTCTCTCCTCCATCATCACATGTAAGAAAACCAGCTATGCAATACTACTACGGGGATTTTCCTaGCTTCAGTGCTTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: GLPLSSIITCKKTSYAILLRGFS*LQCLRN
Trigger: ATTCCTCAAGCACTGAAGTCAGGAAAATCCCCGTAG...TAGTATTGCATAGCTGGTTTTCTTACATGTGATGATGGAGGAGAGAGGAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp GCCAGAAACTGTACATATTTCACTACATGCCTAAGTCTGGGTCTTCCTCTCTCCAAAGTAGGAACAACATaGGGAAACAGAAGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: ARNCTYFTTCLSLGLPLSKVGTT*GNRSFG
Trigger: GCCAAAGCTTCTGTTTCCTCATGTTGTTCCTACTTT...GGAGAGAGGAAGACCCAGACTTAGGCATGTAGTGAAATATGTACAGTTTCTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp TGTTATAAGAGCTCAGAAGCCTGGGGCTGGAATATGACTTACGACAGAGAGCCTGAGAATCTAGAGTGCTaGATTCAACACAAGCTCATT +
Preference number: 4 (lower is better)
Translates to: CYKSSEAWGWNMTYDREPENLEC*IQHKLI
Trigger: AATGAGCTTGTGTTGAATTCAGCACTCTAGATTCTC...AGGCTCTCTGTCGTAAGTCATATTCCAGCCCCAGGCTTCTGAGCTCTTATAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR GCA 90 bp GATGCCAGAAACTGTACATATTTCACTACATGCCTAAGTCTGGGTCTTCCTCTCTTTCTTTTGTCAGTGTaGTGTACGCCTCTGCCTACA +
Preference number: 4 (lower is better)
Translates to: DARNCTYFTTCLSLGLPLFLLSV*CTPLPT
Trigger: TGTAGGCAGAGGCGTACAGCACACTGACAAAAGAAA...GAGAGGAAGACCCAGACTTAGGCATGTAGTGAAATATGTACAGTTTCTGGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR GCA 90 bp TTCAGGGTTAGGATCCAGCCTCTCAAGGACATCAAAAGCTTTGGCAGAATAGTATTTCTTTTGTCAGTGTaGTGTACGCCTCTGCCTACA +
Preference number: 4 (lower is better)
Translates to: FRVRIQPLKDIKSFGRIVFLLSV*CTPLPT
Trigger: TGTAGGCAGAGGCGTACAGCACACTGACAAAAGAAA...TACTATTCTGCCAAAGCTTTTGATGTCCTTGAGAGGCTGGATCCTAACCCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR GCA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTAAAACAACCAGATTGTaGCTGATGAGTTCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: QTMALCSARRLSLSKSVSKTTRL*LMSSLA
Trigger: TGCTAAAGAACTCATCAGGCACAATCTGGTTGTTTT...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR GCA 90 bp AGAAAGGCACCAGATAAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCCAGGAAGCCATGCACTaGCTCCCTGGTATTGTATCA +
Preference number: 4 (lower is better)
Translates to: RKAPDKSKILLLLGSYRVQEAMH*LPGIVS
Trigger: TGATACAATACCAGGGAGGCAGTGCATGGCTTCCTG...GACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR GCA 90 bp CAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGGAAGCCATGCACTaGCTCCCTGGTATTGTATCA +
Preference number: 4 (lower is better)
Translates to: QNLIATRIIQGHRLWHSVQEAMH*LPGIVS
Trigger: TGATACAATACCAGGGAGGCAGTGCATGGCTTCCTG...AACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR GCA 90 bp AAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCAGGAAGCCATGCACTaGCTCCCTGGTATTGTATCA +
Preference number: 4 (lower is better)
Translates to: KSKILLLLGSYRVTDYGTQEAMH*LPGIVS
Trigger: TGATACAATACCAGGGAGGCAGTGCATGGCTTCCTG...AGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR GCA 90 bp TGTTATAAGAGCTCAGAAGCCTGGGGCTGGAATATGACTTACGACAGAGAGCCTAAAGATGTTTGTTATTaGAGCCAGGAGACAATGCCA +
Preference number: 4 (lower is better)
Translates to: CYKSSEAWGWNMTYDREPKDVCY*SQETMP
Trigger: TGGCATTGTCTCCTGGCTGCAATAACAAACATCTTT...AGGCTCTCTGTCGTAAGTCATATTCCAGCCCCAGGCTTCTGAGCTCTTATAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR GCA 90 bp CAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTTTCACTGCCAAAACCTaGAGACGAGTTCTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: QNLIATRIIQGHRLWHSVFTAKT*RRVLPV
Trigger: GACAGGGAGAACTCGTCTGCAGGTTTTGGCAGTGAA...AACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CCA 90 bp TTCAGGGTTAGGATCCAGCCTCTCAAGGACATCAAAAGCTTTGGCAGAATAGTACATGCACTGCCTCCCTaGTATTGTATCACATTCACT +
Preference number: 4 (lower is better)
Translates to: FRVRIQPLKDIKSFGRIVHALPP*YCITFT
Trigger: AGTGAATGTGATACAATACCAGGGAGGCAGTGCATG...TACTATTCTGCCAAAGCTTTTGATGTCCTTGAGAGGCTGGATCCTAACCCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR CCA 90 bp ATTGTATCACATTCACTAGCTGATCCTCCCACCAACTGGAAGAACTGCTGGGCAATCATGTATTCTACTTaGGTGTTACCTGTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: IVSHSLADPPTNWKNCWAIMYST*VLPVLL
Trigger: GAGAAGCACAGGTAACACCCAAGTAGAATACATGAT...TGCCCAGCAGTTCTTCCAGTTGGTGGGAGGATCAGCTAGTGAATGTGATACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR CCA 90 bp TCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTGGTTCCTAGGACGCTaGCGCTATTTTAGATGGACA +
Preference number: 4 (lower is better)
Translates to: SKILLLLGSYRVTDYGTLWFLGR*RYFRWT
Trigger: TGTCCATCTAAAATAGCGCCAGCGTCCTAGGAACCA...CAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp CGGAAAACAACCAGATTGTGCCTGATGAGTTCTTTAGCAAATTCAAAGGATGAATGTCAAAGTAGAAGCTaGTTCCTAGGACGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: RKTTRLCLMSSLANSKDECQSRS*FLGRWR
Trigger: GCGCCAGCGTCCTAGGAACCAGCTTCTACTTTGACA...TTCATCCTTTGAATTTGCTAAAGAACTCATCAGGCACAATCTGGTTGTTTTCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR CCA 90 bp GAGAGCCTAGCCATTAGGAGATTCCCTCAAAGGACTTTATACGATTCATGTTTTTCATCGATCTCTTCTTaGCTGCTTCCACTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: ESLAIRRFPQRTLYDSCFSSISS*LLPLLP
Trigger: TGGCAGGAGTGGAAGCAGCCAAGAAGAGATCGATGA...AAAACATGAATCGTATAAAGTCCTTTGAGGGAATCTCCTAATGGCTAGGCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CCA 90 bp AAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTTCATCGATCTCTTCTTaGCTGCTTCCACTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: KSKILLLLGSYRVTDYGTSSISS*LLPLLP
Trigger: TGGCAGGAGTGGAAGCAGCCAAGAAGAGATCGATGA...AGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp AGAAAGGCACCAGATAAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCTTGAAAGCATCATCTTaGCGTCGGTCTTGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: RKAPDKSKILLLLGSYRVLKASS*RRSCES
Trigger: GGACTCACAAGACCGACGTCAAGATGATGCTTTCAA...GACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR TCA 90 bp TCCTTTCTATACAACTCCTTCATCCACAAGTGGAGTGCTGGGATAAATGGAACATTGGAGTCGGCTTTTTaGAGCTTTAAATCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SFLYNSFIHKWSAGINGTLESAF*SFKSSC
Trigger: GCAGCTGGATTTAAAGCTTCAAAAAGCCGACTCCAA...TGTTCCATTTATCCCAGCACTCCACTTGTGGATGAAGGAGTTGTATAGAAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp AAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTGTTCTCTCCCAGCTATaGTCATCTGGAAAATGCCCA +
Preference number: 4 (lower is better)
Translates to: KSKILLLLGSYRVTDYGTVLSQL*SSGKCP
Trigger: TGGGCATTTTCCAGATGATCATAGCTGGGAGAGAAC...AGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR TCA 90 bp CAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCTACGGGGATTTTCCTaGCTTCAGTGCTTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: QNLIATRIIQGHRLWHSVLRGFS*LQCLRN
Trigger: ATTCCTCAAGCACTGAAGTCAGGAAAATCCCCGTAG...AACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp TCTCCTTTTATTAATCTTTCTAATTGCTGTGATGTACCAAAGCAGAGTAGGACTTTATCTCCTCCACAGTaGGGAGGGGTTCCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: SPFINLSNCCDVPKQSRTLSPPQ*GGVPLE
Trigger: CTCCAAGGGAACCCCTCCTCACTGTGGAGGAGATAA...AGTCCTACTCTGCTTTGGTACATCACAGCAATTAGAAAGATTAATAAAAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS-3UTR TCA 90 bp CGGAAAACAACCAGATTGTGCCTGATGAGTTCTTTAGCAAATTCAAAGGATGAACTTCATTTCTCCTTGTaGGCCAAGTGGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RKTTRLCLMSSLANSKDELHFSL*AKWKRR
Trigger: CCTCCTCTTCCACTTGGCTCACAAGGAGAAATGAAG...TTCATCCTTTGAATTTGCTAAAGAACTCATCAGGCACAATCTGGTTGTTTTCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR GCA 90 bp TCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGCAAGAAAGAAGTAGGTaGAAGCTAGGTTCACCCAGA +
Preference number: 4 (lower is better)
Translates to: SKILLLLGSYRVTDYGTLQERSR*KLGSPR
Trigger: TCTGGGTGAACCTAGCTTGCACCTACTTCTTTCTTG...CAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR GCA 90 bp AAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGCCTCAGCTGCTCTaGCATTGTAAAGGCGAAAAT +
Preference number: 4 (lower is better)
Translates to: KSKILLLLGSYRVTDYGTLPQLL*HCKGEN
Trigger: ATTTTCGCCTTTACAATGGCAGAGCAGCTGAGGCAG...AGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
CDS-3UTR GCA 90 bp AGAAAGGCACCAGATAAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCCAAGCTTTTGAGTTCTaGCTCAGCTGCTCTGCCATT +
Preference number: 4 (lower is better)
Translates to: RKAPDKSKILLLLGSYRVQAFEF*LSCSAI
Trigger: AATGGCAGAGCAGCTGAGGCAGAACTCAAAAGCTTG...GACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
CDS-3UTR GCA 90 bp CAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAAGCTTTTGAGTTCTaGCTCAGCTGCTCTGCCATT +
Preference number: 4 (lower is better)
Translates to: QNLIATRIIQGHRLWHSVQAFEF*LSCSAI
Trigger: AATGGCAGAGCAGCTGAGGCAGAACTCAAAAGCTTG...AACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
CDS-3UTR GCA 90 bp ACATCAAAGATGTTTGTTATTGCAGCCAGGAGACAATGCCATAAAATGCTAACATTCCTGGCCAAGGGCTaGATTGACCACTCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: TSKMFVIAARRQCHKMLTFLAKG*IDHSFE
Trigger: CTCAAAGGAGTGGTCAATGCAGCCCTTGGCCAGGAA...TGTTAGCATTTTATGGCATTGTCTCCTGGCTGCAATAACAAACATCTTTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR GCA 90 bp GCAAATTCAAAGGATGAAGAAGCATTGTCCATCAAGCTTTTGAGTTCTGCCTCAACTGGTATTGCCTGTTaGAGCTTTGGCTTGGGCATA +
Preference number: 4 (lower is better)
Translates to: ANSKDEEALSIKLLSSASTGIAC*SFGLGI
Trigger: TATGCCCAAGCCAAAGCTGCAACAGGCAATACCAGT...TGAGGCAGAACTCAAAAGCTTGATGGACAATGCTTCTTCATCCTTTGAATTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR GCA 90 bp CAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTACTGGTATTGCCTGTTaGAGCTTTGGCTTGGGCATA +
Preference number: 4 (lower is better)
Translates to: QNLIATRIIQGHRLWHSVTGIAC*SFGLGI
Trigger: TATGCCCAAGCCAAAGCTGCAACAGGCAATACCAGT...AACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR GCA 90 bp TTTTCATCTTCTCACTTTGGATCAAGAGGAACGCCTCTTCGCCCTCACTGGTATGCAGCCAGGAGACAATaGCATAAAATGCTAACAAAA +
Preference number: 4 (lower is better)
Translates to: FSSSHFGSRGTPLRPHWYAARRQ*HKMLTK
Trigger: TTTTGTTAGCATTTTATGGCATTGTCTCCTGGCTGC...ATACCAGTGAGGGCGAAGAGGCGTTCCTCTTGATCCAAAGTGAGAAGATGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR GCA 90 bp TATAAGAGCTCAGAAGCCTGGGGCTGGAATATGACTTACGACAGAGAGCCTAGCCACCTTTTAAAACATTaGAATACTCATCTTACTGCG +
Preference number: 4 (lower is better)
Translates to: YKSSEAWGWNMTYDREPSHLLKH*NTHLTA
Trigger: CGCAGTAAGATGAGTATTGCAATGTTTTAAAAGGTG...GCTAGGCTCTCTGTCGTAAGTCATATTCCAGCCCCAGGCTTCTGAGCTCTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CCA 90 bp GCTGAGGTAAATGTAATCATTTTTCATCTTCTCACTTTGGATCAAGAGGAACGCGATCCTCCCACCAACTaGAAGAACTGCTGGGCAATT +
Preference number: 4 (lower is better)
Translates to: AEVNVIIFHLLTLDQEERDPPTN*KNCWAI
Trigger: AATTGCCCAGCAGTTCTTCCAGTTGGTGGGAGGATC...GCGTTCCTCTTGATCCAAAGTGAGAAGATGAAAAATGATTACATTTACCTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR CCA 90 bp TCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGCATGCACTGCCTCCCTaGTATTGTATCACATTCACT +
Preference number: 4 (lower is better)
Translates to: SKILLLLGSYRVTDYGTLHALPP*YCITFT
Trigger: AGTGAATGTGATACAATACCAGGGAGGCAGTGCATG...CAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp AAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCCAGCTATGATCATCTaGAAAATGCCCACACAGGCA +
Preference number: 4 (lower is better)
Translates to: KSKILLLLGSYRVTDYGTPAMII*KMPTQA
Trigger: TGCCTGTGTGGGCATTTTCCAGATGATCATAGCTGG...AGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp CTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGCCATGGCGCTATTTTAGATaGACACTCTGTTTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LIATRIIQGHRLWHSVQPWRYFR*TLCFLW
Trigger: CCAAAGAAAACAGAGTGTCCATCTAAAATAGCGCCA...TGGCTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp CAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTTGGTTCCTAGGACGCTaGCGCTATTTTAGATGGACA +
Preference number: 4 (lower is better)
Translates to: QNLIATRIIQGHRLWHSVWFLGR*RYFRWT
Trigger: TGTCCATCTAAAATAGCGCCAGCGTCCTAGGAACCA...AACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp AGAAAGGCACCAGATAAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCTGGTTCCTAGGACGCTaGCGCTATTTTAGATGGACA +
Preference number: 4 (lower is better)
Translates to: RKAPDKSKILLLLGSYRVWFLGR*RYFRWT
Trigger: TGTCCATCTAAAATAGCGCCAGCGTCCTAGGAACCA...GACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR CCA 90 bp ACATCAAAGATGTTTGTTATTGCAGCCAGGAGACAATGCCATAAAATGCTAACACAGGGTCACAGACTATaGCACTCTGTTCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: TSKMFVIAARRQCHKMLTQGHRL*HSVQPG
Trigger: TCCTGGCTGAACAGAGTGCCATAGTCTGTGACCCTG...TGTTAGCATTTTATGGCATTGTCTCCTGGCTGCAATAACAAACATCTTTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR CCA 90 bp CTCTCTCCTCCATCATCACATGTAAGAAAACCAGCTATGCAATACTACTTTGCATCAGAAGCCTGGGGCTaGAATATGACTTACGACAGA +
Preference number: 4 (lower is better)
Translates to: LSPPSSHVRKPAMQYYFASEAWG*NMTYDR
Trigger: TCTGTCGTAAGTCATATTCCAGCCCCAGGCTTCTGA...TGCAAAGTAGTATTGCATAGCTGGTTTTCTTACATGTGATGATGGAGGAGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CCA 90 bp CAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTTCAGAAGCCTGGGGCTaGAATATGACTTACGACAGA +
Preference number: 4 (lower is better)
Translates to: QNLIATRIIQGHRLWHSVSEAWG*NMTYDR
Trigger: TCTGTCGTAAGTCATATTCCAGCCCCAGGCTTCTGA...AACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CCA 90 bp TCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTCCTTCATCCACAAGTaGAGTGCTGGGATAAATGGA +
Preference number: 4 (lower is better)
Translates to: SKILLLLGSYRVTDYGTLSFIHK*SAGING
Trigger: TCCATTTATCCCAGCACTCCACTTGTGGATGAAGGA...CAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR CAA 72 bp TTTCTGGAAATAGGTTGTGAGCTTAAGAATGCTCAGTaGTATGTTATAAGAGCTCAGAAGCCTGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: FLEIGCELKNAQ*YVIRAQKPGAG
Trigger: TCCAGCCCCAGGCTTCTGAGCTCTTATAACATACAACTGAGCATTCTTAAGCTCACAACCTATTTCCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp GGCGCATCTCCTTTTATTAATCTTTCTAATTGCTGTGATGTACCAAAGCAGAGTTTGAAAGCATCATCTTaGCGTCGGTCTTGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: GASPFINLSNCCDVPKQSLKASS*RRSCES
Trigger: GGACTCACAAGACCGACGTCAAGATGATGCTTTCAA...ACTCTGCTTTGGTACATCACAGCAATTAGAAAGATTAATAAAAGGAGATGCGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS-3UTR TCA 90 bp CAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTTTGGAGTCGGCTTTTTaGAGCTTTAAATCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QNLIATRIIQGHRLWHSVLESAF*SFKSSC
Trigger: GCAGCTGGATTTAAAGCTTCAAAAAGCCGACTCCAA...AACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR TCA 90 bp GAGAGCCTAGCCATTAGGAGATTCCCTCAAAGGACTTTATACGATTCATGTTTTTCATCATTAAACTTGTaGGCCAAGTGGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ESLAIRRFPQRTLYDSCFSSLNL*AKWKRR
Trigger: CCTCCTCTTCCACTTGGCTCACAAGTTTAATGATGA...AAAACATGAATCGTATAAAGTCCTTTGAGGGAATCTCCTAATGGCTAGGCTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp AGAAAGGCACCAGATAAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCTCGCATATAGTGGATTaGGGCCAAACTGAGTTGATC +
Preference number: 4 (lower is better)
Translates to: RKAPDKSKILLLLGSYRVSHIVD*GQTELI
Trigger: GATCAACTCAGTTTGGCCTCAATCCACTATATGCGA...GACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
CDS-3UTR TCA 90 bp CAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTTCGCATATAGTGGATTaGGGCCAAACTGAGTTGATC +
Preference number: 4 (lower is better)
Translates to: QNLIATRIIQGHRLWHSVSHIVD*GQTELI
Trigger: GATCAACTCAGTTTGGCCTCAATCCACTATATGCGA...AACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
CDS-3UTR TCA 90 bp GATGCCAGAAACTGTACATATTTCACTACATGCCTAAGTCTGGGTCTTCCTCTCACCGAGCTAACCAGCTaGGGTAAATGTAATCATTTT +
Preference number: 4 (lower is better)
Translates to: DARNCTYFTTCLSLGLPLTELTS*GKCNHF
Trigger: AAAATGATTACATTTACCTCAGCTGGTTAGCTCGGT...GAGAGGAAGACCCAGACTTAGGCATGTAGTGAAATATGTACAGTTTCTGGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp GCCAGAAACTGTACATATTTCACTACATGCCTAAGTCTGGGTCTTCCTCTCTCCCCCAAGATTCAGAGATaGCGTTATAAAACCCTTTAT +
Preference number: 4 (lower is better)
Translates to: ARNCTYFTTCLSLGLPLSPKIQR*RYKTLY
Trigger: ATAAAGGGTTTTATAACGTCATCTCTGAATCTTGGG...GGAGAGAGGAAGACCCAGACTTAGGCATGTAGTGAAATATGTACAGTTTCTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp GGTCTTCCTCTCTCCTCCATCATCACATGTAAGAAAACCAGCTATGCAATACTACCTGACTTCAGTGCTTaGGGAATTCTTTCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: GLPLSSIITCKKTSYAILPDFSA*GILSFS
Trigger: ACTGAAAGAAAGAATTCCTCAAGCACTGAAGTCAGG...TAGTATTGCATAGCTGGTTTTCTTACATGTGATGATGGAGGAGAGAGGAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR GCA 90 bp CTCTCTCCTCCATCATCACATGTAAGAAAACCAGCTATGCAATACTACTTTGCACAAGAAAGAAGTAGGTaGAAGCTAGGTTCACCCAGA +
Preference number: 4 (lower is better)
Translates to: LSPPSSHVRKPAMQYYFAQERSR*KLGSPR
Trigger: TCTGGGTGAACCTAGCTTGCACCTACTTCTTTCTTG...TGCAAAGTAGTATTGCATAGCTGGTTTTCTTACATGTGATGATGGAGGAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR GCA 90 bp AAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCAAGAAAGAAGTAGGTaGAAGCTAGGTTCACCCAGA +
Preference number: 4 (lower is better)
Translates to: KSKILLLLGSYRVTDYGTQERSR*KLGSPR
Trigger: TCTGGGTGAACCTAGCTTGCACCTACTTCTTTCTTG...AGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR GCA 90 bp TTATTAATCTTTCTAATTGCTGTGATGTACCAAAGCAGAGTAGGACTGAACTCAGAGTTCTGCCTCAGCTaGTCTGCCATTGTAAAGGCG +
Preference number: 4 (lower is better)
Translates to: LLIFLIAVMYQSRVGLNSEFCLS*SAIVKA
Trigger: CGCCTTTACAATGGCAGAGCAGCTGAGGCAGAACTC...TGAGTTCAGTCCTACTCTGCTTTGGTACATCACAGCAATTAGAAAGATTAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS-3UTR GCA 90 bp TCAAAGATGTTTGTTATTGCAGCCAGGAGACAATGCCATAAAATGCTAACAAAAGAGTTCTGCCTCAGCTaGTCTGCCATTGTAAAGGCG +
Preference number: 4 (lower is better)
Translates to: SKMFVIAARRQCHKMLTKEFCLS*SAIVKA
Trigger: CGCCTTTACAATGGCAGAGCAGCTGAGGCAGAACTC...TTTTGTTAGCATTTTATGGCATTGTCTCCTGGCTGCAATAACAAACATCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
CDS-3UTR GCA 90 bp AAACAGCCAAAACTTCTTGAGACACATCATAGTAATCCAACTTGTAGTAGCAGACAGGAAGCCATGCACTaGCTCCCTGGTATTGTATCA +
Preference number: 4 (lower is better)
Translates to: KQPKLLETHHSNPTCSSRQEAMH*LPGIVS
Trigger: TGATACAATACCAGGGAGGCAGTGCATGGCTTCCTG...TCTGCTACTACAAGTTGGATTACTATGATGTGTCTCAAGAAGTTTTGGCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR GCA 90 bp AAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTTGGGTGTTACCTGTaGTTCTCAGTAAATGGAGCA +
Preference number: 4 (lower is better)
Translates to: KSKILLLLGSYRVTDYGTLGCYL*FSVNGA
Trigger: TGCTCCATTTACTGAGAAGCACAGGTAACACCCAAG...AGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR GCA 90 bp AGTTCTCTTCCCATCTATTCTCTTCTAGGTAGGGATGGCTCTGCACTTTCTAGAAAAGATGTTTGTTATTaGAGCCAGGAGACAATGCCA +
Preference number: 4 (lower is better)
Translates to: SSLPIYSLLGRDGSALSRKDVCY*SQETMP
Trigger: TGGCATTGTCTCCTGGCTGCAATAACAAACATCTTT...TCTAGAAAGTGCAGAGCCATCCCTACCTAGAAGAGAATAGATGGGAAGAGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR GCA 90 bp GGTCTTCCTCTCTCCTCCATCATCACATGTAAGAAAACCAGCTATGCAATACTAGAAGACAAATTTCACTaGCAAAACCTGCAGACGAGT +
Preference number: 4 (lower is better)
Translates to: GLPLSSIITCKKTSYAILEDKFH*QNLQTS
Trigger: ACTCGTCTGCAGGTTTTGGCAGTGAAATTTGTCTTC...TAGTATTGCATAGCTGGTTTTCTTACATGTGATGATGGAGGAGAGAGGAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CCA 90 bp CTTGCTGGCGCATCTCCTTTTATTAATCTTTCTAATTGCTGTGATGTACCAAAGAAGAGGAGGCGGTTTTaGAGTCGGCTTTTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: LAGASPFINLSNCCDVPKKRRRF*SRLFEA
Trigger: AGCTTCAAAAAGCCGACTCCAAAACCGCCTCCTCTT...CTTTGGTACATCACAGCAATTAGAAAGATTAATAAAAGGAGATGCGCCAGCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS-3UTR CCA 90 bp CGGAAAACAACCAGATTGTGCCTGATGAGTTCTTTAGCAAATTCAAAGGATGAAAAGAGGAGGCGGTTTTaGAGTCGGCTTTTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: RKTTRLCLMSSLANSKDEKRRRF*SRLFEA
Trigger: AGCTTCAAAAAGCCGACTCCAAAACCGCCTCCTCTT...TTCATCCTTTGAATTTGCTAAAGAACTCATCAGGCACAATCTGGTTGTTTTCCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR CCA 90 bp AGTGCTGGGATAAATGGAACAACTAATACAGTGCCTACGGGGATTTTCCTGACTTGGCGCTATTTTAGATaGACACTCTGTTTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: SAGINGTTNTVPTGIFLTWRYFR*TLCFLW
Trigger: CCAAAGAAAACAGAGTGTCCATCTAAAATAGCGCCA...AGTCAGGAAAATCCCCGTAGGCACTGTATTAGTTGTTCCATTTATCCCAGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR CAA 72 bp TTTGGAAGAAAGGCACCAGATAAGTCCAAAATCTTATaGCTACTAGGATCATACAGGGTCACAGACTATGGC +
Preference number: 4 (lower is better)
Translates to: FGRKAPDKSKIL*LLGSYRVTDYG
Trigger: GCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCTTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
3UTR CAA 72 bp ACAGTGAGGAGGGGTTCCCTTGGAGTAAAGCATTACTaGCTGGCGCATCTCCTTTTATTAATCTTTCTAATT +
Preference number: 4 (lower is better)
Translates to: TVRRGSLGVKHY*LAHLLLLIFLI
Trigger: AATTAGAAAGATTAATAAAAGGAGATGCGCCAGCAAGTAATGCTTTACTCCAAGGGAACCCCTCCTCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS-3UTR TCA 90 bp CTTGCTGGCGCATCTCCTTTTATTAATCTTTCTAATTGCTGTGATGTACCAAAGTCGCATATAGTGGATTaGGGCCAAACTGAGTTGATC +
Preference number: 4 (lower is better)
Translates to: LAGASPFINLSNCCDVPKSHIVD*GQTELI
Trigger: GATCAACTCAGTTTGGCCTCAATCCACTATATGCGA...CTTTGGTACATCACAGCAATTAGAAAGATTAATAAAAGGAGATGCGCCAGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS-3UTR TCA 90 bp TTCAGGGTTAGGATCCAGCCTCTCAAGGACATCAAAAGCTTTGGCAGAATAGTAAGCAAATTCAAAGGATaGAGAAGCATTGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: FRVRIQPLKDIKSFGRIVSKFKG*RSIVHQ
Trigger: TTGATGGACAATGCTTCTTCATCCTTTGAATTTGCT...TACTATTCTGCCAAAGCTTTTGATGTCCTTGAGAGGCTGGATCCTAACCCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR TCA 90 bp AGAAAGGCACCAGATAAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCTGGCCCATTTCTTCATaGTCCGGATCATGTATTCTA +
Preference number: 4 (lower is better)
Translates to: RKAPDKSKILLLLGSYRVWPISS*SGSCIL
Trigger: TAGAATACATGATCCGGATCATGAAGAAATGGGCCA...GACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR TCA 90 bp AAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTTGGCCCATTTCTTCATaGTCCGGATCATGTATTCTA +
Preference number: 4 (lower is better)
Translates to: KSKILLLLGSYRVTDYGTWPISS*SGSCIL
Trigger: TAGAATACATGATCCGGATCATGAAGAAATGGGCCA...AGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR TCA 90 bp AGTGCTGGGATAAATGGAACAACTAATACAGTGCCTACGGGGATTTTCCTGACTTGCATAAAAGTACTCTaGGCATTTTTGGAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: SAGINGTTNTVPTGIFLTCIKVL*AFLEER
Trigger: CCTTTCTTCCAAAAATGCTCAGAGTACTTTTATGCA...AGTCAGGAAAATCCCCGTAGGCACTGTATTAGTTGTTCCATTTATCCCAGCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp TTCAGGGTTAGGATCCAGCCTCTCAAGGACATCAAAAGCTTTGGCAGAATAGTATGCATAAAAGTACTCTaGGCATTTTTGGAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: FRVRIQPLKDIKSFGRIVCIKVL*AFLEER
Trigger: CCTTTCTTCCAAAAATGCTCAGAGTACTTTTATGCA...TACTATTCTGCCAAAGCTTTTGATGTCCTTGAGAGGCTGGATCCTAACCCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR TCA 90 bp AGCATTTTTGGAAGAAAGGCACCAGATAAGTCCAAAATCTTATTGCTACTAGGATCTTCTTCCCCAACATaGCGTTTGAACTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: SIFGRKAPDKSKILLLLGSSSPT*RLNSNR
Trigger: CCTGTTGGAGTTCAAACGTCATGTTGGGGAAGAAGA...TCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCTTCCAAAAATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR TCA 90 bp GAGAGCCTAGCCATTAGGAGATTCCCTCAAAGGACTTTATACGATTCATGTTTTCCTGACTTCAGTGCTTaGGGAATTCTTTCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: ESLAIRRFPQRTLYDSCFPDFSA*GILSFS
Trigger: ACTGAAAGAAAGAATTCCTCAAGCACTGAAGTCAGG...AAAACATGAATCGTATAAAGTCCTTTGAGGGAATCTCCTAATGGCTAGGCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp AGCATTTTTGGAAGAAAGGCACCAGATAAGTCCAAAATCTTATTGCTACTAGGAGGTGAAATAACCCCTTaGGACAGTCCTGAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: SIFGRKAPDKSKILLLLGGEITP*DSPEGE
Trigger: TTCACCTTCAGGACTGTCTCAAGGGGTTATTTCACC...TCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCTTCCAAAAATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR GCA 90 bp GGCGCATCTCCTTTTATTAATCTTTCTAATTGCTGTGATGTACCAAAGCAGAGTCAAGAAAGAAGTAGGTaGAAGCTAGGTTCACCCAGA +
Preference number: 4 (lower is better)
Translates to: GASPFINLSNCCDVPKQSQERSR*KLGSPR
Trigger: TCTGGGTGAACCTAGCTTGCACCTACTTCTTTCTTG...ACTCTGCTTTGGTACATCACAGCAATTAGAAAGATTAATAAAAGGAGATGCGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS-3UTR GCA 90 bp AAACAGCCAAAACTTCTTGAGACACATCATAGTAATCCAACTTGTAGTAGCAGACAAGCTTTTGAGTTCTaGCTCAGCTGCTCTGCCATT +
Preference number: 4 (lower is better)
Translates to: KQPKLLETHHSNPTCSSRQAFEF*LSCSAI
Trigger: AATGGCAGAGCAGCTGAGGCAGAACTCAAAAGCTTG...TCTGCTACTACAAGTTGGATTACTATGATGTGTCTCAAGAAGTTTTGGCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR GCA 90 bp ACATCAAAGATGTTTGTTATTGCAGCCAGGAGACAATGCCATAAAATGCTAACAACTGGTATTGCCTGTTaGAGCTTTGGCTTGGGCATA +
Preference number: 4 (lower is better)
Translates to: TSKMFVIAARRQCHKMLTTGIAC*SFGLGI
Trigger: TATGCCCAAGCCAAAGCTGCAACAGGCAATACCAGT...TGTTAGCATTTTATGGCATTGTCTCCTGGCTGCAATAACAAACATCTTTGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR GCA 90 bp AATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGGCAGCCAGGAGACAATaGCATAAAATGCTAACAAAA +
Preference number: 4 (lower is better)
Translates to: NLIATRIIQGHRLWHSVQAARRQ*HKMLTK
Trigger: TTTTGTTAGCATTTTATGGCATTGTCTCCTGGCTGC...CTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR GCA 90 bp AATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGAAAGATGTTTGTTATTaGAGCCAGGAGACAATGCCA +
Preference number: 4 (lower is better)
Translates to: NLIATRIIQGHRLWHSVQKDVCY*SQETMP
Trigger: TGGCATTGTCTCCTGGCTGCAATAACAAACATCTTT...CTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR GCA 90 bp TCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGACATATTTCACTACATaGCTAAGTCTGGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SKILLLLGSYRVTDYGTLTYFTT*LSLGLP
Trigger: AGGAAGACCCAGACTTAGGCATGTAGTGAAATATGT...CAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CCA 90 bp ACATCAAAGATGTTTGTTATTGCAGCCAGGAGACAATGCCATAAAATGCTAACAAAGAGGAGGCGGTTTTaGAGTCGGCTTTTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: TSKMFVIAARRQCHKMLTKRRRF*SRLFEA
Trigger: AGCTTCAAAAAGCCGACTCCAAAACCGCCTCCTCTT...TGTTAGCATTTTATGGCATTGTCTCCTGGCTGCAATAACAAACATCTTTGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR CCA 90 bp GGTCTTCCTCTCTCCTCCATCATCACATGTAAGAAAACCAGCTATGCAATACTATGGCGCTATTTTAGATaGACACTCTGTTTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: GLPLSSIITCKKTSYAILWRYFR*TLCFLW
Trigger: CCAAAGAAAACAGAGTGTCCATCTAAAATAGCGCCA...TAGTATTGCATAGCTGGTTTTCTTACATGTGATGATGGAGGAGAGAGGAAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CCA 90 bp AGCATTTTTGGAAGAAAGGCACCAGATAAGTCCAAAATCTTATTGCTACTAGGAAAGAGCTCAGAAGCCTaGGGCTGGAATATGACTTAC +
Preference number: 4 (lower is better)
Translates to: SIFGRKAPDKSKILLLLGKSSEA*GWNMTY
Trigger: GTAAGTCATATTCCAGCCCCAGGCTTCTGAGCTCTT...TCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCTTCCAAAAATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CCA 90 bp GCAATTCACTGGAAGACAAATTTCACTGCCAAAACCTGCAGACGAGTTCTCCCTATAATAGCAATTCACTaGAAGACAAATTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: AIHWKTNFTAKTCRRVLPIIAIH*KTNFTA
Trigger: GGCAGTGAAATTTGTCTTCCAGTGAATTGCTATTAT...AGGGAGAACTCGTCTGCAGGTTTTGGCAGTGAAATTTGTCTTCCAGTGAATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp ACATCAAAGATGTTTGTTATTGCAGCCAGGAGACAATGCCATAAAATGCTAACATTGGAGTCGGCTTTTTaGAGCTTTAAATCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TSKMFVIAARRQCHKMLTLESAF*SFKSSC
Trigger: GCAGCTGGATTTAAAGCTTCAAAAAGCCGACTCCAA...TGTTAGCATTTTATGGCATTGTCTCCTGGCTGCAATAACAAACATCTTTGATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR TCA 90 bp ACATCAAAGATGTTTGTTATTGCAGCCAGGAGACAATGCCATAAAATGCTAACATCATCATTAAACTTGTaGGCCAAGTGGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TSKMFVIAARRQCHKMLTSSLNL*AKWKRR
Trigger: CCTCCTCTTCCACTTGGCTCACAAGTTTAATGATGA...TGTTAGCATTTTATGGCATTGTCTCCTGGCTGCAATAACAAACATCTTTGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp AGCATTTTTGGAAGAAAGGCACCAGATAAGTCCAAAATCTTATTGCTACTAGGATTTCATATGATCCCTTaGACCCATTTCCTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: SIFGRKAPDKSKILLLLGFHMIP*THFLAK
Trigger: CTTGGCCAGGAAATGGGTTCAAGGGATCATATGAAA...TCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCTTCCAAAAATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR TCA 90 bp AAACAGCCAAAACTTCTTGAGACACATCATAGTAATCCAACTTGTAGTAGCAGATTTCATATGATCCCTTaGACCCATTTCCTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: KQPKLLETHHSNPTCSSRFHMIP*THFLAK
Trigger: CTTGGCCAGGAAATGGGTTCAAGGGATCATATGAAA...TCTGCTACTACAAGTTGGATTACTATGATGTGTCTCAAGAAGTTTTGGCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR TCA 90 bp AAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTACCGAGCTAACCAGCTaGGGTAAATGTAATCATTTT +
Preference number: 4 (lower is better)
Translates to: KSKILLLLGSYRVTDYGTTELTS*GKCNHF
Trigger: AAAATGATTACATTTACCTCAGCTGGTTAGCTCGGT...AGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR TCA 90 bp CAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTACCGAGCTAACCAGCTaGGGTAAATGTAATCATTTT +
Preference number: 4 (lower is better)
Translates to: QNLIATRIIQGHRLWHSVTELTS*GKCNHF
Trigger: AAAATGATTACATTTACCTCAGCTGGTTAGCTCGGT...AACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR TCA 90 bp TCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTGCATAAAAGTACTCTaGGCATTTTTGGAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: SKILLLLGSYRVTDYGTLCIKVL*AFLEER
Trigger: CCTTTCTTCCAAAAATGCTCAGAGTACTTTTATGCA...CAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR TCA 90 bp AATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGCCCAAGATTCAGAGATaGCGTTATAAAACCCTTTAT +
Preference number: 4 (lower is better)
Translates to: NLIATRIIQGHRLWHSVQPKIQR*RYKTLY
Trigger: ATAAAGGGTTTTATAACGTCATCTCTGAATCTTGGG...CTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
CDS-3UTR TCA 90 bp CTATACAACTCCTTCATCCACAAGTGGAGTGCTGGGATAAATGGAACAACTAATGAGAATCTAGAGTGCTaGATTCAACACAAGCTCATT +
Preference number: 4 (lower is better)
Translates to: LYNSFIHKWSAGINGTTNENLEC*IQHKLI
Trigger: AATGAGCTTGTGTTGAATTCAGCACTCTAGATTCTC...ATTAGTTGTTCCATTTATCCCAGCACTCCACTTGTGGATGAAGGAGTTGTATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR GCA 90 bp AGCATTTTTGGAAGAAAGGCACCAGATAAGTCCAAAATCTTATTGCTACTAGGATTTCTTTTGTCAGTGTaGTGTACGCCTCTGCCTACA +
Preference number: 4 (lower is better)
Translates to: SIFGRKAPDKSKILLLLGFLLSV*CTPLPT
Trigger: TGTAGGCAGAGGCGTACAGCACACTGACAAAAGAAA...TCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCTTCCAAAAATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR GCA 90 bp ACATCAAAGATGTTTGTTATTGCAGCCAGGAGACAATGCCATAAAATGCTAACATTTCTTTTGTCAGTGTaGTGTACGCCTCTGCCTACA +
Preference number: 4 (lower is better)
Translates to: TSKMFVIAARRQCHKMLTFLLSV*CTPLPT
Trigger: TGTAGGCAGAGGCGTACAGCACACTGACAAAAGAAA...TGTTAGCATTTTATGGCATTGTCTCCTGGCTGCAATAACAAACATCTTTGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR GCA 90 bp AAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTGGCTTTAAGATTGAGTaGGATGGTACTATCAGGAAT +
Preference number: 4 (lower is better)
Translates to: KSKILLLLGSYRVTDYGTGFKIE*DGTIRN
Trigger: ATTCCTGATAGTACCATCGCACTCAATCTTAAAGCC...AGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
CDS-3UTR GCA 90 bp AAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTGCAGCCAGGAGACAATaGCATAAAATGCTAACAAAA +
Preference number: 4 (lower is better)
Translates to: KSKILLLLGSYRVTDYGTAARRQ*HKMLTK
Trigger: TTTTGTTAGCATTTTATGGCATTGTCTCCTGGCTGC...AGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR GCA 90 bp AAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTAAAGATGTTTGTTATTaGAGCCAGGAGACAATGCCA +
Preference number: 4 (lower is better)
Translates to: KSKILLLLGSYRVTDYGTKDVCY*SQETMP
Trigger: TGGCATTGTCTCCTGGCTGCAATAACAAACATCTTT...AGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR GCA 90 bp ACATCAAAGATGTTTGTTATTGCAGCCAGGAGACAATGCCATAAAATGCTAACACATCCACAAGTGGAGTaGTGGGATAAATGGAACAAC +
Preference number: 4 (lower is better)
Translates to: TSKMFVIAARRQCHKMLTHPQVE*WDKWNN
Trigger: GTTGTTCCATTTATCCCAGCACTCCACTTGTGGATG...TGTTAGCATTTTATGGCATTGTCTCCTGGCTGCAATAACAAACATCTTTGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR GCA 90 bp TCAAAGATGTTTGTTATTGCAGCCAGGAGACAATGCCATAAAATGCTAACAAAAGGCTGCTTCCACTCCTaGCATTTTCTCATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: SKMFVIAARRQCHKMLTKGCFHS*HFLISF
Trigger: AAAGGAGATGAGAAAATGGCAGGAGTGGAAGCAGCC...TTTTGTTAGCATTTTATGGCATTGTCTCCTGGCTGCAATAACAAACATCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CCA 90 bp CTCTCTCCTCCATCATCACATGTAAGAAAACCAGCTATGCAATACTACTTTGCAATCATGTATTCTACTTaGGTGTTACCTGTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LSPPSSHVRKPAMQYYFAIMYST*VLPVLL
Trigger: GAGAAGCACAGGTAACACCCAAGTAGAATACATGAT...TGCAAAGTAGTATTGCATAGCTGGTTTTCTTACATGTGATGATGGAGGAGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CCA 90 bp AAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTATCATGTATTCTACTTaGGTGTTACCTGTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: KSKILLLLGSYRVTDYGTIMYST*VLPVLL
Trigger: GAGAAGCACAGGTAACACCCAAGTAGAATACATGAT...AGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CCA 90 bp CTATACAACTCCTTCATCCACAAGTGGAGTGCTGGGATAAATGGAACAACTAATAATTCCCCAATAAAATaGGATAACGTACAGAGACGC +
Preference number: 4 (lower is better)
Translates to: LYNSFIHKWSAGINGTTNNSPIK*DNVQRR
Trigger: GCGTCTCTGTACGTTATCCCATTTTATTGGGGAATT...ATTAGTTGTTCCATTTATCCCAGCACTCCACTTGTGGATGAAGGAGTTGTATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR TCA 90 bp CAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTAGCAAATTCAAAGGATaGAGAAGCATTGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: QNLIATRIIQGHRLWHSVSKFKG*RSIVHQ
Trigger: TTGATGGACAATGCTTCTTCATCCTTTGAATTTGCT...AACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR TCA 90 bp AAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTAGCAAATTCAAAGGATaGAGAAGCATTGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: KSKILLLLGSYRVTDYGTSKFKG*RSIVHQ
Trigger: TTGATGGACAATGCTTCTTCATCCTTTGAATTTGCT...AGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR TCA 90 bp ACATCAAAGATGTTTGTTATTGCAGCCAGGAGACAATGCCATAAAATGCTAACATGGCCCATTTCTTCATaGTCCGGATCATGTATTCTA +
Preference number: 4 (lower is better)
Translates to: TSKMFVIAARRQCHKMLTWPISS*SGSCIL
Trigger: TAGAATACATGATCCGGATCATGAAGAAATGGGCCA...TGTTAGCATTTTATGGCATTGTCTCCTGGCTGCAATAACAAACATCTTTGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR TCA 90 bp GCAAATTCAAAGGATGAAGAAGCATTGTCCATCAAGCTTTTGAGTTCTGCCTCACCCAAGATTCAGAGATaGCGTTATAAAACCCTTTAT +
Preference number: 4 (lower is better)
Translates to: ANSKDEEALSIKLLSSASPKIQR*RYKTLY
Trigger: ATAAAGGGTTTTATAACGTCATCTCTGAATCTTGGG...TGAGGCAGAACTCAAAAGCTTGATGGACAATGCTTCTTCATCCTTTGAATTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR GCA 90 bp TCTCCTTTTATTAATCTTTCTAATTGCTGTGATGTACCAAAGCAGAGTAGGACTTTTCTTTTGTCAGTGTaGTGTACGCCTCTGCCTACA +
Preference number: 4 (lower is better)
Translates to: SPFINLSNCCDVPKQSRTFLLSV*CTPLPT
Trigger: TGTAGGCAGAGGCGTACAGCACACTGACAAAAGAAA...AGTCCTACTCTGCTTTGGTACATCACAGCAATTAGAAAGATTAATAAAAGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS-3UTR GCA 90 bp AAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTAAAACAACCAGATTGTaGCTGATGAGTTCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: KSKILLLLGSYRVTDYGTKTTRL*LMSSLA
Trigger: TGCTAAAGAACTCATCAGGCACAATCTGGTTGTTTT...AGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR GCA 90 bp TTATTAATCTTTCTAATTGCTGTGATGTACCAAAGCAGAGTAGGACTGAACTCACACCTGGATCTACACTaGCTTGTGCTTCTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: LLIFLIAVMYQSRVGLNSHLDLH*LVLLSK
Trigger: TTTGGAAAGAAGCACAAGGCAGTGTAGATCCAGGTG...TGAGTTCAGTCCTACTCTGCTTTGGTACATCACAGCAATTAGAAAGATTAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS-3UTR TCA 90 bp AGCATTTTTGGAAGAAAGGCACCAGATAAGTCCAAAATCTTATTGCTACTAGGAACCGAGCTAACCAGCTaGGGTAAATGTAATCATTTT +
Preference number: 4 (lower is better)
Translates to: SIFGRKAPDKSKILLLLGTELTS*GKCNHF
Trigger: AAAATGATTACATTTACCTCAGCTGGTTAGCTCGGT...TCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCTTCCAAAAATGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR TCA 90 bp TCAAAGATGTTTGTTATTGCAGCCAGGAGACAATGCCATAAAATGCTAACAAAATGGCCCATTTCTTCATaGTCCGGATCATGTATTCTA +
Preference number: 4 (lower is better)
Translates to: SKMFVIAARRQCHKMLTKWPISS*SGSCIL
Trigger: TAGAATACATGATCCGGATCATGAAGAAATGGGCCA...TTTTGTTAGCATTTTATGGCATTGTCTCCTGGCTGCAATAACAAACATCTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR GCA 90 bp ACATCAAAGATGTTTGTTATTGCAGCCAGGAGACAATGCCATAAAATGCTAACAAAAGATGTTTGTTATTaGAGCCAGGAGACAATGCCA +
Preference number: 4 (lower is better)
Translates to: TSKMFVIAARRQCHKMLTKDVCY*SQETMP
Trigger: TGGCATTGTCTCCTGGCTGCAATAACAAACATCTTT...TGTTAGCATTTTATGGCATTGTCTCCTGGCTGCAATAACAAACATCTTTGATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR GCA 90 bp GGCGCATCTCCTTTTATTAATCTTTCTAATTGCTGTGATGTACCAAAGCAGAGTTTATTCACCAGATTGTaGCTGATGAGTTCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: GASPFINLSNCCDVPKQSLFTRL*LMSSLA
Trigger: TGCTAAAGAACTCATCAGGCACAATCTGGTGAATAA...ACTCTGCTTTGGTACATCACAGCAATTAGAAAGATTAATAAAAGGAGATGCGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS-3UTR CCA 90 bp AGCATTTTTGGAAGAAAGGCACCAGATAAGTCCAAAATCTTATTGCTACTAGGAATCATGTATTCTACTTaGGTGTTACCTGTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SIFGRKAPDKSKILLLLGIMYST*VLPVLL
Trigger: GAGAAGCACAGGTAACACCCAAGTAGAATACATGAT...TCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCTTCCAAAAATGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR CCA 90 bp AAACAGCCAAAACTTCTTGAGACACATCATAGTAATCCAACTTGTAGTAGCAGAAATTCCCCAATAAAATaGGATAACGTACAGAGACGC +
Preference number: 4 (lower is better)
Translates to: KQPKLLETHHSNPTCSSRNSPIK*DNVQRR
Trigger: GCGTCTCTGTACGTTATCCCATTTTATTGGGGAATT...TCTGCTACTACAAGTTGGATTACTATGATGTGTCTCAAGAAGTTTTGGCTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR CCA 90 bp CAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTATAATAGCAATTCACTaGAAGACAAATTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: QNLIATRIIQGHRLWHSVIIAIH*KTNFTA
Trigger: GGCAGTGAAATTTGTCTTCCAGTGAATTGCTATTAT...AACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
3UTR CAA 72 bp ATCAGGAATTTGCTGAAGGTAAACAGCCAAAACTTCTaGAGACACATCATAGTAATCCAACTTGTAGTAGCA +
Preference number: 4 (lower is better)
Translates to: IRNLLKVNSQNF*RHIIVIQLVVA
Trigger: TGCTACTACAAGTTGGATTACTATGATGTGTCTCAAGAAGTTTTGGCTGTTTACCTTCAGCAAATTCCTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR TCA 90 bp GCGCATCTCCTTTTATTAATCTTTCTAATTGCTGTGATGTACCAAAGCAGAGTAAGCAAATTCAAAGGATaGAGAAGCATTGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: AHLLLLIFLIAVMYQSRVSKFKG*RSIVHQ
Trigger: TTGATGGACAATGCTTCTTCATCCTTTGAATTTGCT...TACTCTGCTTTGGTACATCACAGCAATTAGAAAGATTAATAAAAGGAGATGCGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS-3UTR TCA 90 bp AGCATTTTTGGAAGAAAGGCACCAGATAAGTCCAAAATCTTATTGCTACTAGGATGCATAAAAGTACTCTaGGCATTTTTGGAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: SIFGRKAPDKSKILLLLGCIKVL*AFLEER
Trigger: CCTTTCTTCCAAAAATGCTCAGAGTACTTTTATGCA...TCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCTTCCAAAAATGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR GCA 90 bp TCAAAGATGTTTGTTATTGCAGCCAGGAGACAATGCCATAAAATGCTAACAAAAGGCTTTAAGATTGAGTaGGATGGTACTATCAGGAAT +
Preference number: 4 (lower is better)
Translates to: SKMFVIAARRQCHKMLTKGFKIE*DGTIRN
Trigger: ATTCCTGATAGTACCATCGCACTCAATCTTAAAGCC...TTTTGTTAGCATTTTATGGCATTGTCTCCTGGCTGCAATAACAAACATCTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
CDS-3UTR GCA 90 bp GCTGAGGTAAATGTAATCATTTTTCATCTTCTCACTTTGGATCAAGAGGAACGCCACCTTTTAAAACATTaGAATACTCATCTTACTGCG +
Preference number: 4 (lower is better)
Translates to: AEVNVIIFHLLTLDQEERHLLKH*NTHLTA
Trigger: CGCAGTAAGATGAGTATTGCAATGTTTTAAAAGGTG...GCGTTCCTCTTGATCCAAAGTGAGAAGATGAAAAATGATTACATTTACCTCAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR GCA 90 bp TCAAAGATGTTTGTTATTGCAGCCAGGAGACAATGCCATAAAATGCTAACAAAAAAAACAACCAGATTGTaGCTGATGAGTTCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: SKMFVIAARRQCHKMLTKKTTRL*LMSSLA
Trigger: TGCTAAAGAACTCATCAGGCACAATCTGGTTGTTTT...TTTTGTTAGCATTTTATGGCATTGTCTCCTGGCTGCAATAACAAACATCTTTGA
36% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR GCA 90 bp AGCATTTTTGGAAGAAAGGCACCAGATAAGTCCAAAATCTTATTGCTACTAGGACACCTTTTAAAACATTaGAATACTCATCTTACTGCG +
Preference number: 4 (lower is better)
Translates to: SIFGRKAPDKSKILLLLGHLLKH*NTHLTA
Trigger: CGCAGTAAGATGAGTATTGCAATGTTTTAAAAGGTG...TCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCTTCCAAAAATGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
CDS-3UTR CAA 90 bp CTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACCTTGAGGCTACACAGGCACCCCGTTaGCCTTCCCAATATTCAGGG +
Preference number: 5 (lower is better)
Translates to: LCSARRLSLSKSVSDLEATQAPR*PSQYSG
Trigger: CCCTGAATATTGGGAAGGCAAACGGGGTGCCTGTGT...AGCCTCAAGGTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp GAGGCTGAGACGGGCGGATCACGAGGTCAGGAGATGGAGAGCATTGTGGCTAACCAAAGATGTTTGTTATaGCAGCCAGGAGACAATGCC +
Preference number: 5 (lower is better)
Translates to: EAETGGSRGQEMESIVANQRCLL*QPGDNA
Trigger: GGCATTGTCTCCTGGCTGCAATAACAAACATCTTTG...GTTAGCCACAATGCTCTCCATCTCCTGACCTCGTGATCCGCCCGTCTCAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CAA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTTCGCCCTCACTGGTATaGCCTGTTGCAGCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: QTMALCSARRLSLSKSVSSPSLV*PVAALA
Trigger: AGCCAAAGCTGCAACAGGCAATACCAGTGAGGGCGA...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTCTGCCTACAGCAGGTTaGGCCCTTGAAAGCATCATC +
Preference number: 5 (lower is better)
Translates to: QTMALCSARRLSLSKSVSLPTAG*ALESII
Trigger: GATGATGCTTTCAAGGGCCAAACCTGCTGTAGGCAG...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp GAGGCTGAGACGGGCGGATCACGAGGTCAGGAGATGGAGAGCATTGTGGCTAACAAGGATGAAGAAGCATaGTCCATCAAGCTTTTGAGT +
Preference number: 5 (lower is better)
Translates to: EAETGGSRGQEMESIVANKDEEA*SIKLLS
Trigger: ACTCAAAAGCTTGATGGACAATGCTTCTTCATCCTT...GTTAGCCACAATGCTCTCCATCTCCTGACCTCGTGATCCGCCCGTCTCAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CAA 90 bp CTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACCTTGAGGCTTGGCCAAGGGCTGCATaGACCACTCCTTTGAGAATA +
Preference number: 5 (lower is better)
Translates to: LCSARRLSLSKSVSDLEAWPRAA*TTPLRI
Trigger: TATTCTCAAAGGAGTGGTCAATGCAGCCCTTGGCCA...AGCCTCAAGGTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTCACTGGTATTGCCTGTaGCAGCTTTGGCTTGGGCAT +
Preference number: 5 (lower is better)
Translates to: QTMALCSARRLSLSKSVSHWYCL*QLWLGH
Trigger: ATGCCCAAGCCAAAGCTGCAACAGGCAATACCAGTG...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTTGGCCAAGGGCTGCATaGACCACTCCTTTGAGAATA +
Preference number: 5 (lower is better)
Translates to: QTMALCSARRLSLSKSVSWPRAA*TTPLRI
Trigger: TATTCTCAAAGGAGTGGTCAATGCAGCCCTTGGCCA...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp CTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGCCATCGCCCTCACTGGTATaGCCTGTTGCAGCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: LIATRIIQGHRLWHSVQPSPSLV*PVAALA
Trigger: AGCCAAAGCTGCAACAGGCAATACCAGTGAGGGCGA...TGGCTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp CTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGCCAACACAGGCACCCCGTTaGCCTTCCCAATATTCAGGG +
Preference number: 5 (lower is better)
Translates to: LIATRIIQGHRLWHSVQPTQAPR*PSQYSG
Trigger: CCCTGAATATTGGGAAGGCAAACGGGGTGCCTGTGT...TGGCTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp ATTGTATCACATTCACTAGCTGATCCTCCCACCAACTGGAAGAACTGCTGGGCATCTCGAAGGGTCTCTTaGGGTTCTCTCCCAGCTATG +
Preference number: 5 (lower is better)
Translates to: IVSHSLADPPTNWKNCWASRRVS*GSLPAM
Trigger: CATAGCTGGGAGAGAACCCAAAGAGACCCTTCGAGA...TGCCCAGCAGTTCTTCCAGTTGGTGGGAGGATCAGCTAGTGAATGTGATACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR CAA 90 bp CTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACCTTGAGGCTAGTCAGTCTCTGACCTaGAGGCTTAAAGAGCAAGGA +
Preference number: 5 (lower is better)
Translates to: LCSARRLSLSKSVSDLEASQSLT*RLKEQG
Trigger: TCCTTGCTCTTTAAGCCTCAAGGTCAGAGACTGACT...AGCCTCAAGGTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp GCAATTCACTGGAAGACAAATTTCACTGCCAAAACCTGCAGACGAGTTCTCCCTCTGCCTACAGCAGGTTaGGCCCTTGAAAGCATCATC +
Preference number: 5 (lower is better)
Translates to: AIHWKTNFTAKTCRRVLPLPTAG*ALESII
Trigger: GATGATGCTTTCAAGGGCCAAACCTGCTGTAGGCAG...AGGGAGAACTCGTCTGCAGGTTTTGGCAGTGAAATTTGTCTTCCAGTGAATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CAA 90 bp TTTTCATCTTCTCACTTTGGATCAAGAGGAACGCCTCTTCGCCCTCACTGGTATCTGCCTACAGCAGGTTaGGCCCTTGAAAGCATCATC +
Preference number: 5 (lower is better)
Translates to: FSSSHFGSRGTPLRPHWYLPTAG*ALESII
Trigger: GATGATGCTTTCAAGGGCCAAACCTGCTGTAGGCAG...ATACCAGTGAGGGCGAAGAGGCGTTCCTCTTGATCCAAAGTGAGAAGATGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR CAA 90 bp AGCAATTCACTGGAAGACAAATTTCACTGCCAAAACCTGCAGACGAGTTCTCCCCACTGGTATTGCCTGTaGCAGCTTTGGCTTGGGCAT +
Preference number: 5 (lower is better)
Translates to: SNSLEDKFHCQNLQTSSPHWYCL*QLWLGH
Trigger: ATGCCCAAGCCAAAGCTGCAACAGGCAATACCAGTG...GGGAGAACTCGTCTGCAGGTTTTGGCAGTGAAATTTGTCTTCCAGTGAATTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CAA 90 bp CTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGCCATCTCGAAGGGTCTCTTaGGGTTCTCTCCCAGCTATG +
Preference number: 5 (lower is better)
Translates to: LIATRIIQGHRLWHSVQPSRRVS*GSLPAM
Trigger: CATAGCTGGGAGAGAACCCAAAGAGACCCTTCGAGA...TGGCTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTAGTCAGTCTCTGACCTaGAGGCTTAAAGAGCAAGGA +
Preference number: 5 (lower is better)
Translates to: QTMALCSARRLSLSKSVSSQSLT*RLKEQG
Trigger: TCCTTGCTCTTTAAGCCTCAAGGTCAGAGACTGACT...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp CTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACCTTGAGGCTGTAGCTCCTCTAGTTTaGGAATCTTCCTACCTTTCT +
Preference number: 5 (lower is better)
Translates to: LCSARRLSLSKSVSDLEAVAPLV*ESSYLS
Trigger: AGAAAGGTAGGAAGATTCCAAAACTAGAGGAGCTAC...AGCCTCAAGGTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp CTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACCTTGAGGCTGGTACTATCAGGAATTaGCTGAAGGTAAACAGCCAA +
Preference number: 5 (lower is better)
Translates to: LCSARRLSLSKSVSDLEAGTIRN*LKVNSQ
Trigger: TTGGCTGTTTACCTTCAGCAAATTCCTGATAGTACC...AGCCTCAAGGTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
CDS-3UTR CAA 90 bp CTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACCTTGAGGCTCGGAAAACAACCAGATaGTGCCTGATGAGTTCTTTA +
Preference number: 5 (lower is better)
Translates to: LCSARRLSLSKSVSDLEARKTTR*CLMSSL
Trigger: TAAAGAACTCATCAGGCACAATCTGGTTGTTTTCCG...AGCCTCAAGGTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR CAA 90 bp CTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGCCATGGCCAAGGGCTGCATaGACCACTCCTTTGAGAATA +
Preference number: 5 (lower is better)
Translates to: LIATRIIQGHRLWHSVQPWPRAA*TTPLRI
Trigger: TATTCTCAAAGGAGTGGTCAATGCAGCCCTTGGCCA...TGGCTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp CTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACCTTGAGGCTTTTTCATATGATCCCTaGAACCCATTTCCTGGCCAA +
Preference number: 5 (lower is better)
Translates to: LCSARRLSLSKSVSDLEAFSYDP*NPFPGQ
Trigger: TTGGCCAGGAAATGGGTTCAAGGGATCATATGAAAA...AGCCTCAAGGTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp AATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGACACAGGCACCCCGTTaGCCTTCCCAATATTCAGGG +
Preference number: 5 (lower is better)
Translates to: NLIATRIIQGHRLWHSVQTQAPR*PSQYSG
Trigger: CCCTGAATATTGGGAAGGCAAACGGGGTGCCTGTGT...CTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTCAAAGATGTTTGTTATaGCAGCCAGGAGACAATGCC +
Preference number: 5 (lower is better)
Translates to: QTMALCSARRLSLSKSVSQRCLL*QPGDNA
Trigger: GGCATTGTCTCCTGGCTGCAATAACAAACATCTTTG...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR CAA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGTAGCTCCTCTAGTTTaGGAATCTTCCTACCTTTCT +
Preference number: 5 (lower is better)
Translates to: QTMALCSARRLSLSKSVSVAPLV*ESSYLS
Trigger: AGAAAGGTAGGAAGATTCCAAAACTAGAGGAGCTAC...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp ACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACTCCAGCTGCTTCAGCTaGTTTATACATCCCAAGAAA +
Preference number: 5 (lower is better)
Translates to: TMALCSARRLSLSKSVSDSSCFS*FIHPKK
Trigger: TTTCTTGGGATGTATAAACAAGCTGAAGCAGCTGGA...GTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp ACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACGGTACTATCAGGAATTaGCTGAAGGTAAACAGCCAA +
Preference number: 5 (lower is better)
Translates to: TMALCSARRLSLSKSVSDGTIRN*LKVNSQ
Trigger: TTGGCTGTTTACCTTCAGCAAATTCCTGATAGTACC...GTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
CDS-3UTR CAA 90 bp TATAAGAGCTCAGAAGCCTGGGGCTGGAATATGACTTACGACAGAGAGCCTAGCGGTACTATCAGGAATTaGCTGAAGGTAAACAGCCAA +
Preference number: 5 (lower is better)
Translates to: YKSSEAWGWNMTYDREPSGTIRN*LKVNSQ
Trigger: TTGGCTGTTTACCTTCAGCAAATTCCTGATAGTACC...GCTAGGCTCTCTGTCGTAAGTCATATTCCAGCCCCAGGCTTCTGAGCTCTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CAA 90 bp ACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACTTTTCATATGATCCCTaGAACCCATTTCCTGGCCAA +
Preference number: 5 (lower is better)
Translates to: TMALCSARRLSLSKSVSDFSYDP*NPFPGQ
Trigger: TTGGCCAGGAAATGGGTTCAAGGGATCATATGAAAA...GTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp TCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGCACTGGTATTGCCTGTaGCAGCTTTGGCTTGGGCAT +
Preference number: 5 (lower is better)
Translates to: SKILLLLGSYRVTDYGTLHWYCL*QLWLGH
Trigger: ATGCCCAAGCCAAAGCTGCAACAGGCAATACCAGTG...CAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp AATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGCACTGGTATTGCCTGTaGCAGCTTTGGCTTGGGCAT +
Preference number: 5 (lower is better)
Translates to: NLIATRIIQGHRLWHSVQHWYCL*QLWLGH
Trigger: ATGCCCAAGCCAAAGCTGCAACAGGCAATACCAGTG...CTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp CAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTTCGCCCTCACTGGTATaGCCTGTTGCAGCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: QNLIATRIIQGHRLWHSVSPSLV*PVAALA
Trigger: AGCCAAAGCTGCAACAGGCAATACCAGTGAGGGCGA...AACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp AGAAAGGCACCAGATAAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACACAGGCACCCCGTTaGCCTTCCCAATATTCAGGG +
Preference number: 5 (lower is better)
Translates to: RKAPDKSKILLLLGSYRVTQAPR*PSQYSG
Trigger: CCCTGAATATTGGGAAGGCAAACGGGGTGCCTGTGT...GACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343187.8
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR CAA 90 bp ACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACGATCATGTATTCTACTaGGGTGTTACCTGTGCTTCT +
Preference number: 5 (lower is better)
Translates to: TMALCSARRLSLSKSVSDDHVFY*GVTCAS
Trigger: AGAAGCACAGGTAACACCCAAGTAGAATACATGATC...GTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGATCATGTATTCTACTaGGGTGTTACCTGTGCTTCT +
Preference number: 5 (lower is better)
Translates to: QTMALCSARRLSLSKSVSDHVFY*GVTCAS
Trigger: AGAAGCACAGGTAACACCCAAGTAGAATACATGATC...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp ACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACGAACATCAAAGATGTTaGTTATTGCAGCCAGGAGAC +
Preference number: 5 (lower is better)
Translates to: TMALCSARRLSLSKSVSDEHQRC*LLQPGD
Trigger: GTCTCCTGGCTGCAATAACAAACATCTTTGATGTTC...GTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR CAA 90 bp CTATACAACTCCTTCATCCACAAGTGGAGTGCTGGGATAAATGGAACAACTAATGTCATCGATCTCTTCTaGGCTGCTTCCACTCCTGCC +
Preference number: 5 (lower is better)
Translates to: LYNSFIHKWSAGINGTTNVIDLF*AASTPA
Trigger: GGCAGGAGTGGAAGCAGCCAAGAAGAGATCGATGAC...ATTAGTTGTTCCATTTATCCCAGCACTCCACTTGTGGATGAAGGAGTTGTATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CAA 90 bp GAGAGCCTAGCCATTAGGAGATTCCCTCAAAGGACTTTATACGATTCATGTTTTGTCATCGATCTCTTCTaGGCTGCTTCCACTCCTGCC +
Preference number: 5 (lower is better)
Translates to: ESLAIRRFPQRTLYDSCFVIDLF*AASTPA
Trigger: GGCAGGAGTGGAAGCAGCCAAGAAGAGATCGATGAC...AAAACATGAATCGTATAAAGTCCTTTGAGGGAATCTCCTAATGGCTAGGCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CAA 90 bp CAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCTGCCTACAGCAGGTTaGGCCCTTGAAAGCATCATC +
Preference number: 5 (lower is better)
Translates to: QNLIATRIIQGHRLWHSVLPTAG*ALESII
Trigger: GATGATGCTTTCAAGGGCCAAACCTGCTGTAGGCAG...AACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp TGTTATAAGAGCTCAGAAGCCTGGGGCTGGAATATGACTTACGACAGAGAGCCTGTAGCTCCTCTAGTTTaGGAATCTTCCTACCTTTCT +
Preference number: 5 (lower is better)
Translates to: CYKSSEAWGWNMTYDREPVAPLV*ESSYLS
Trigger: AGAAAGGTAGGAAGATTCCAAAACTAGAGGAGCTAC...AGGCTCTCTGTCGTAAGTCATATTCCAGCCCCAGGCTTCTGAGCTCTTATAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CAA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTAAGGATGAAGAAGCATaGTCCATCAAGCTTTTGAGT +
Preference number: 5 (lower is better)
Translates to: QTMALCSARRLSLSKSVSKDEEA*SIKLLS
Trigger: ACTCAAAAGCTTGATGGACAATGCTTCTTCATCCTT...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR CAA 90 bp TATAAGAGCTCAGAAGCCTGGGGCTGGAATATGACTTACGACAGAGAGCCTAGCAAGGATGAAGAAGCATaGTCCATCAAGCTTTTGAGT +
Preference number: 5 (lower is better)
Translates to: YKSSEAWGWNMTYDREPSKDEEA*SIKLLS
Trigger: ACTCAAAAGCTTGATGGACAATGCTTCTTCATCCTT...GCTAGGCTCTCTGTCGTAAGTCATATTCCAGCCCCAGGCTTCTGAGCTCTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CAA 90 bp CCTGTGCTTCTCAGTAAATGGAGCACTTCTCGAAGGGTCTCTTTGGGTTCTCTCAAGGATGAAGAAGCATaGTCCATCAAGCTTTTGAGT +
Preference number: 5 (lower is better)
Translates to: PVLLSKWSTSRRVSLGSLKDEEA*SIKLLS
Trigger: ACTCAAAAGCTTGATGGACAATGCTTCTTCATCCTT...GAGAGAACCCAAAGAGACCCTTCGAGAAGTGCTCCATTTACTGAGAAGCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR CAA 90 bp CAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCACTGGTATTGCCTGTaGCAGCTTTGGCTTGGGCAT +
Preference number: 5 (lower is better)
Translates to: QNLIATRIIQGHRLWHSVHWYCL*QLWLGH
Trigger: ATGCCCAAGCCAAAGCTGCAACAGGCAATACCAGTG...AACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp AGCAATTCACTGGAAGACAAATTTCACTGCCAAAACCTGCAGACGAGTTCTCCCTTTCATCTTCTCACTTaGGATCAAGAGGAACGCCTC +
Preference number: 5 (lower is better)
Translates to: SNSLEDKFHCQNLQTSSPFHLLT*DQEERL
Trigger: GAGGCGTTCCTCTTGATCCAAAGTGAGAAGATGAAA...GGGAGAACTCGTCTGCAGGTTTTGGCAGTGAAATTTGTCTTCCAGTGAATTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CAA 90 bp CTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGCCATTTCATCTTCTCACTTaGGATCAAGAGGAACGCCTC +
Preference number: 5 (lower is better)
Translates to: LIATRIIQGHRLWHSVQPFHLLT*DQEERL
Trigger: GAGGCGTTCCTCTTGATCCAAAGTGAGAAGATGAAA...TGGCTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp AGAAAGGCACCAGATAAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCTCTCGAAGGGTCTCTTaGGGTTCTCTCCCAGCTATG +
Preference number: 5 (lower is better)
Translates to: RKAPDKSKILLLLGSYRVSRRVS*GSLPAM
Trigger: CATAGCTGGGAGAGAACCCAAAGAGACCCTTCGAGA...GACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343187.8
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR CAA 90 bp GAGAGCCTAGCCATTAGGAGATTCCCTCAAAGGACTTTATACGATTCATGTTTTTCTCGAAGGGTCTCTTaGGGTTCTCTCCCAGCTATG +
Preference number: 5 (lower is better)
Translates to: ESLAIRRFPQRTLYDSCFSRRVS*GSLPAM
Trigger: CATAGCTGGGAGAGAACCCAAAGAGACCCTTCGAGA...AAAACATGAATCGTATAAAGTCCTTTGAGGGAATCTCCTAATGGCTAGGCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464848.5
CDS-3UTR CAA 90 bp AAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTTCTCGAAGGGTCTCTTaGGGTTCTCTCCCAGCTATG +
Preference number: 5 (lower is better)
Translates to: KSKILLLLGSYRVTDYGTSRRVS*GSLPAM
Trigger: CATAGCTGGGAGAGAACCCAAAGAGACCCTTCGAGA...AGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp AGTGCTGGGATAAATGGAACAACTAATACAGTGCCTACGGGGATTTTCCTGACTAGTCAGTCTCTGACCTaGAGGCTTAAAGAGCAAGGA +
Preference number: 5 (lower is better)
Translates to: SAGINGTTNTVPTGIFLTSQSLT*RLKEQG
Trigger: TCCTTGCTCTTTAAGCCTCAAGGTCAGAGACTGACT...AGTCAGGAAAATCCCCGTAGGCACTGTATTAGTTGTTCCATTTATCCCAGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CAA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTAGCTTCTTGTACATCTaGACGAAGGTAGTAAATCAC +
Preference number: 5 (lower is better)
Translates to: QTMALCSARRLSLSKSVSSFLYI*TKVVNH
Trigger: GTGATTTACTACCTTCGTCAAGATGTACAAGAAGCT...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478836.6
CDS CCA 90 bp CGGATCATGTATTCTACTTGGGTGTTACCTGTGCTTCTCAGTAAATaGAGCACTTCTCGAAGGGTCTCTCTTGTAGCAGTCATTAGCAAT +
Preference number: 5 (lower is better)
Translates to: RIMYSTWVLPVLLSK*STSRRVSLVAVISN
Trigger: ATTGCTAATGACTGCTACAAGAGAGACCCTTCGAGAAGTGCTCCATTTACTGAGAAGCACAGGTAACACCCAAGTAGAATACATGATCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430935.5
CDS-3UTR CAA 90 bp ATTGTATCACATTCACTAGCTGATCCTCCCACCAACTGGAAGAACTGCTGGGCATTACAGGCTTTAAGATaGAGTGCGATGGTACTATCA +
Preference number: 5 (lower is better)
Translates to: IVSHSLADPPTNWKNCWALQALR*SAMVLS
Trigger: TGATAGTACCATCGCACTCAATCTTAAAGCCTGTAA...TGCCCAGCAGTTCTTCCAGTTGGTGGGAGGATCAGCTAGTGAATGTGATACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR CAA 90 bp CTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGCCACGGAAAACAACCAGATaGTGCCTGATGAGTTCTTTA +
Preference number: 5 (lower is better)
Translates to: LIATRIIQGHRLWHSVQPRKTTR*CLMSSL
Trigger: TAAAGAACTCATCAGGCACAATCTGGTTGTTTTCCG...TGGCTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR CAA 90 bp AGCAATTCACTGGAAGACAAATTTCACTGCCAAAACCTGCAGACGAGTTCTCCCCGGAAAACAACCAGATaGTGCCTGATGAGTTCTTTA +
Preference number: 5 (lower is better)
Translates to: SNSLEDKFHCQNLQTSSPRKTTR*CLMSSL
Trigger: TAAAGAACTCATCAGGCACAATCTGGTTGTTTTCCG...GGGAGAACTCGTCTGCAGGTTTTGGCAGTGAAATTTGTCTTCCAGTGAATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CAA 90 bp CAGACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTTTCTTGTACATCATCTaGACGAAGGTAGTAAATCAC +
Preference number: 5 (lower is better)
Translates to: QTMALCSARRLSLSKSVSFLYII*TKVVNH
Trigger: GTGATTTACTACCTTCGTCAAGATGATGTACAAGAA...AGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000495038.5
CDS-3UTR CAA 90 bp CAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTTGGCCAAGGGCTGCATaGACCACTCCTTTGAGAATA +
Preference number: 5 (lower is better)
Translates to: QNLIATRIIQGHRLWHSVWPRAA*TTPLRI
Trigger: TATTCTCAAAGGAGTGGTCAATGCAGCCCTTGGCCA...AACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp GCAATTCACTGGAAGACAAATTTCACTGCCAAAACCTGCAGACGAGTTCTCCCTTTTTCATATGATCCCTaGAACCCATTTCCTGGCCAA +
Preference number: 5 (lower is better)
Translates to: AIHWKTNFTAKTCRRVLPFSYDP*NPFPGQ
Trigger: TTGGCCAGGAAATGGGTTCAAGGGATCATATGAAAA...AGGGAGAACTCGTCTGCAGGTTTTGGCAGTGAAATTTGTCTTCCAGTGAATTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CAA 90 bp TATAAGAGCTCAGAAGCCTGGGGCTGGAATATGACTTACGACAGAGAGCCTAGCTGTTGCAGCTTTGGCTaGGGCATAATTAAAGTTAAA +
Preference number: 5 (lower is better)
Translates to: YKSSEAWGWNMTYDREPSCCSFG*GIIKVK
Trigger: TTTAACTTTAATTATGCCCAAGCCAAAGCTGCAACA...GCTAGGCTCTCTGTCGTAAGTCATATTCCAGCCCCAGGCTTCTGAGCTCTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CAA 90 bp ACATCAAAGATGTTTGTTATTGCAGCCAGGAGACAATGCCATAAAATGCTAACATCGCCCTCACTGGTATaGCCTGTTGCAGCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: TSKMFVIAARRQCHKMLTSPSLV*PVAALA
Trigger: AGCCAAAGCTGCAACAGGCAATACCAGTGAGGGCGA...TGTTAGCATTTTATGGCATTGTCTCCTGGCTGCAATAACAAACATCTTTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR CAA 90 bp TCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGAGTCAGTCTCTGACCTaGAGGCTTAAAGAGCAAGGA +
Preference number: 5 (lower is better)
Translates to: SKILLLLGSYRVTDYGTLSQSLT*RLKEQG
Trigger: TCCTTGCTCTTTAAGCCTCAAGGTCAGAGACTGACT...CAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp CCTGTGCTTCTCAGTAAATGGAGCACTTCTCGAAGGGTCTCTTTGGGTTCTCTCAAGTCCAAAATCTTATaGCTACTAGGATCATACAGG +
Preference number: 5 (lower is better)
Translates to: PVLLSKWSTSRRVSLGSLKSKIL*LLGSYR
Trigger: CCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT...GAGAGAACCCAAAGAGACCCTTCGAGAAGTGCTCCATTTACTGAGAAGCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR CAA 90 bp ACTATGGCACTCTGTTCAGCCAGGAGACTAAGTCTCAGCAAGTCAGTCTCTGACTCAACACAAGCTCATTaGAAAGTAAGTCTCCATCAA +
Preference number: 5 (lower is better)
Translates to: TMALCSARRLSLSKSVSDSTQAH*KVSLHQ
Trigger: TTGATGGAGACTTACTTTCAAATGAGCTTGTGTTGA...GTCAGAGACTGACTTGCTGAGACTTAGTCTCCTGGCTGAACAGAGTGCCATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CAA 90 bp GCAATTCACTGGAAGACAAATTTCACTGCCAAAACCTGCAGACGAGTTCTCCCTTTACAGGCTTTAAGATaGAGTGCGATGGTACTATCA +
Preference number: 5 (lower is better)
Translates to: AIHWKTNFTAKTCRRVLPLQALR*SAMVLS
Trigger: TGATAGTACCATCGCACTCAATCTTAAAGCCTGTAA...AGGGAGAACTCGTCTGCAGGTTTTGGCAGTGAAATTTGTCTTCCAGTGAATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CAA 90 bp TGTTATAAGAGCTCAGAAGCCTGGGGCTGGAATATGACTTACGACAGAGAGCCTTTCTTGTACATCATCTaGACGAAGGTAGTAAATCAC +
Preference number: 5 (lower is better)
Translates to: CYKSSEAWGWNMTYDREPFLYII*TKVVNH
Trigger: GTGATTTACTACCTTCGTCAAGATGATGTACAAGAA...AGGCTCTCTGTCGTAAGTCATATTCCAGCCCCAGGCTTCTGAGCTCTTATAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CAA 90 bp AGCATTTTTGGAAGAAAGGCACCAGATAAGTCCAAAATCTTATTGCTACTAGGACACTGGTATTGCCTGTaGCAGCTTTGGCTTGGGCAT +
Preference number: 5 (lower is better)
Translates to: SIFGRKAPDKSKILLLLGHWYCL*QLWLGH
Trigger: ATGCCCAAGCCAAAGCTGCAACAGGCAATACCAGTG...TCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCTTCCAAAAATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR CAA 90 bp TCAAAGATGTTTGTTATTGCAGCCAGGAGACAATGCCATAAAATGCTAACAAAATCGCCCTCACTGGTATaGCCTGTTGCAGCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: SKMFVIAARRQCHKMLTKSPSLV*PVAALA
Trigger: AGCCAAAGCTGCAACAGGCAATACCAGTGAGGGCGA...TTTTGTTAGCATTTTATGGCATTGTCTCCTGGCTGCAATAACAAACATCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR CAA 90 bp TCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTTCATCTTCTCACTTaGGATCAAGAGGAACGCCTC +
Preference number: 5 (lower is better)
Translates to: SKILLLLGSYRVTDYGTLFHLLT*DQEERL
Trigger: GAGGCGTTCCTCTTGATCCAAAGTGAGAAGATGAAA...CAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp AAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTAGTCAGTCTCTGACCTaGAGGCTTAAAGAGCAAGGA +
Preference number: 5 (lower is better)
Translates to: KSKILLLLGSYRVTDYGTSQSLT*RLKEQG
Trigger: TCCTTGCTCTTTAAGCCTCAAGGTCAGAGACTGACT...AGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp TGTTATAAGAGCTCAGAAGCCTGGGGCTGGAATATGACTTACGACAGAGAGCCTCTTAAGAATGCTCAGTaGTATGTTATAAGAGCTCAG +
Preference number: 5 (lower is better)
Translates to: CYKSSEAWGWNMTYDREPLKNAQ*YVIRAQ
Trigger: CTGAGCTCTTATAACATACAACTGAGCATTCTTAAG...AGGCTCTCTGTCGTAAGTCATATTCCAGCCCCAGGCTTCTGAGCTCTTATAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CAA 90 bp TCTCCTTTTATTAATCTTTCTAATTGCTGTGATGTACCAAAGCAGAGTAGGACTCTGCCTACAGCAGGTTaGGCCCTTGAAAGCATCATC +
Preference number: 5 (lower is better)
Translates to: SPFINLSNCCDVPKQSRTLPTAG*ALESII
Trigger: GATGATGCTTTCAAGGGCCAAACCTGCTGTAGGCAG...AGTCCTACTCTGCTTTGGTACATCACAGCAATTAGAAAGATTAATAAAAGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS-3UTR CAA 90 bp TCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGGTAGCTCCTCTAGTTTaGGAATCTTCCTACCTTTCT +
Preference number: 5 (lower is better)
Translates to: SKILLLLGSYRVTDYGTLVAPLV*ESSYLS
Trigger: AGAAAGGTAGGAAGATTCCAAAACTAGAGGAGCTAC...CAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp AATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGGTAGCTCCTCTAGTTTaGGAATCTTCCTACCTTTCT +
Preference number: 5 (lower is better)
Translates to: NLIATRIIQGHRLWHSVQVAPLV*ESSYLS
Trigger: AGAAAGGTAGGAAGATTCCAAAACTAGAGGAGCTAC...CTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp AATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGTCCAGCTGCTTCAGCTaGTTTATACATCCCAAGAAA +
Preference number: 5 (lower is better)
Translates to: NLIATRIIQGHRLWHSVQSSCFS*FIHPKK
Trigger: TTTCTTGGGATGTATAAACAAGCTGAAGCAGCTGGA...CTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp TCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTCCAGCTGCTTCAGCTaGTTTATACATCCCAAGAAA +
Preference number: 5 (lower is better)
Translates to: SKILLLLGSYRVTDYGTLSSCFS*FIHPKK
Trigger: TTTCTTGGGATGTATAAACAAGCTGAAGCAGCTGGA...CAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp AGGAAACAGATTAGTACTTTAAAACTTATCTCCTCCACAGTGAGGAGGGGTTCCTCCAGCTGCTTCAGCTaGTTTATACATCCCAAGAAA +
Preference number: 5 (lower is better)
Translates to: RKQISTLKLISSTVRRGSSSCFS*FIHPKK
Trigger: TTTCTTGGGATGTATAAACAAGCTGAAGCAGCTGGA...GGAACCCCTCCTCACTGTGGAGGAGATAAGTTTTAAAGTACTAATCTGTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS-3UTR CAA 90 bp AATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGGGTACTATCAGGAATTaGCTGAAGGTAAACAGCCAA +
Preference number: 5 (lower is better)
Translates to: NLIATRIIQGHRLWHSVQGTIRN*LKVNSQ
Trigger: TTGGCTGTTTACCTTCAGCAAATTCCTGATAGTACC...CTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
CDS-3UTR CAA 90 bp AATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGTTTTCATATGATCCCTaGAACCCATTTCCTGGCCAA +
Preference number: 5 (lower is better)
Translates to: NLIATRIIQGHRLWHSVQFSYDP*NPFPGQ
Trigger: TTGGCCAGGAAATGGGTTCAAGGGATCATATGAAAA...CTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp GCCAGAAACTGTACATATTTCACTACATGCCTAAGTCTGGGTCTTCCTCTCTCCTGTTGCAGCTTTGGCTaGGGCATAATTAAAGTTAAA +
Preference number: 5 (lower is better)
Translates to: ARNCTYFTTCLSLGLPLSCCSFG*GIIKVK
Trigger: TTTAACTTTAATTATGCCCAAGCCAAAGCTGCAACA...GGAGAGAGGAAGACCCAGACTTAGGCATGTAGTGAAATATGTACAGTTTCTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CAA 90 bp AAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTTTTCATCTTCTCACTTaGGATCAAGAGGAACGCCTC +
Preference number: 5 (lower is better)
Translates to: KSKILLLLGSYRVTDYGTFHLLT*DQEERL
Trigger: GAGGCGTTCCTCTTGATCCAAAGTGAGAAGATGAAA...AGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp GAGAGCCTAGCCATTAGGAGATTCCCTCAAAGGACTTTATACGATTCATGTTTTTTTCATCTTCTCACTTaGGATCAAGAGGAACGCCTC +
Preference number: 5 (lower is better)
Translates to: ESLAIRRFPQRTLYDSCFFHLLT*DQEERL
Trigger: GAGGCGTTCCTCTTGATCCAAAGTGAGAAGATGAAA...AAAACATGAATCGTATAAAGTCCTTTGAGGGAATCTCCTAATGGCTAGGCTCTC
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CAA 90 bp AGAAAGGCACCAGATAAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCCAAAGATGTTTGTTATaGCAGCCAGGAGACAATGCC +
Preference number: 5 (lower is better)
Translates to: RKAPDKSKILLLLGSYRVQRCLL*QPGDNA
Trigger: GGCATTGTCTCCTGGCTGCAATAACAAACATCTTTG...GACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR CAA 90 bp GGTCTTCCTCTCTCCTCCATCATCACATGTAAGAAAACCAGCTATGCAATACTAGAACATCAAAGATGTTaGTTATTGCAGCCAGGAGAC +
Preference number: 5 (lower is better)
Translates to: GLPLSSIITCKKTSYAILEHQRC*LLQPGD
Trigger: GTCTCCTGGCTGCAATAACAAACATCTTTGATGTTC...TAGTATTGCATAGCTGGTTTTCTTACATGTGATGATGGAGGAGAGAGGAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CAA 90 bp TCCTTTCTATACAACTCCTTCATCCACAAGTGGAGTGCTGGGATAAATGGAACAGAACATCAAAGATGTTaGTTATTGCAGCCAGGAGAC +
Preference number: 5 (lower is better)
Translates to: SFLYNSFIHKWSAGINGTEHQRC*LLQPGD
Trigger: GTCTCCTGGCTGCAATAACAAACATCTTTGATGTTC...TGTTCCATTTATCCCAGCACTCCACTTGTGGATGAAGGAGTTGTATAGAAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS TCA 90 bp AACAACCAGATTGTGCCTGATGAGTTCTTTAGCAAATTCAAAGGATaGAGAAGCATTGTCCATCAAGCTTTTGAGTTCTGCCTTGTGAGC +
Preference number: 5 (lower is better)
Translates to: NNQIVPDEFFSKFKG*RSIVHQAFEFCLVS
Trigger: GCTCACAAGGCAGAACTCAAAAGCTTGATGGACAATGCTTCTTCATCCTTTGAATTTGCTAAAGAACTCATCAGGCACAATCTGGTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478836.6
CDS GCA 90 bp AGGACTGAACTCAGTCAAGACGGGAAATCGTTATTCACCAGATTGTaGCTGATGAGTTCTTTAGCAAATTCAAAGGATGAAGAAGCATTG +
Preference number: 5 (lower is better)
Translates to: RTELSQDGKSLFTRL*LMSSLANSKDEEAL
Trigger: CAATGCTTCTTCATCCTTTGAATTTGCTAAAGAACTCATCAGGCACAATCTGGTGAATAACGATTTCCCGTCTTGACTGAGTTCAGTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS-3UTR CAA 90 bp AAACAGATTAGTACTTTAAAACTTATCTCCTCCACAGTGAGGAGGGGTTCCCTTGTAGCTCCTCTAGTTTaGGAATCTTCCTACCTTTCT +
Preference number: 5 (lower is better)
Translates to: KQISTLKLISSTVRRGSLVAPLV*ESSYLS
Trigger: AGAAAGGTAGGAAGATTCCAAAACTAGAGGAGCTAC...AAGGGAACCCCTCCTCACTGTGGAGGAGATAAGTTTTAAAGTACTAATCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS-3UTR CAA 90 bp CAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTTCCAGCTGCTTCAGCTaGTTTATACATCCCAAGAAA +
Preference number: 5 (lower is better)
Translates to: QNLIATRIIQGHRLWHSVSSCFS*FIHPKK
Trigger: TTTCTTGGGATGTATAAACAAGCTGAAGCAGCTGGA...AACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp AATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGTTACAGGCTTTAAGATaGAGTGCGATGGTACTATCA +
Preference number: 5 (lower is better)
Translates to: NLIATRIIQGHRLWHSVQLQALR*SAMVLS
Trigger: TGATAGTACCATCGCACTCAATCTTAAAGCCTGTAA...CTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
CDS-3UTR CAA 90 bp AGAAAGGCACCAGATAAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCCGGAAAACAACCAGATaGTGCCTGATGAGTTCTTTA +
Preference number: 5 (lower is better)
Translates to: RKAPDKSKILLLLGSYRVRKTTR*CLMSSL
Trigger: TAAAGAACTCATCAGGCACAATCTGGTTGTTTTCCG...GACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR CAA 90 bp CAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCGGAAAACAACCAGATaGTGCCTGATGAGTTCTTTA +
Preference number: 5 (lower is better)
Translates to: QNLIATRIIQGHRLWHSVRKTTR*CLMSSL
Trigger: TAAAGAACTCATCAGGCACAATCTGGTTGTTTTCCG...AACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR CAA 90 bp TCAAAGATGTTTGTTATTGCAGCCAGGAGACAATGCCATAAAATGCTAACAAAATGGCCAAGGGCTGCATaGACCACTCCTTTGAGAATA +
Preference number: 5 (lower is better)
Translates to: SKMFVIAARRQCHKMLTKWPRAA*TTPLRI
Trigger: TATTCTCAAAGGAGTGGTCAATGCAGCCCTTGGCCA...TTTTGTTAGCATTTTATGGCATTGTCTCCTGGCTGCAATAACAAACATCTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR CAA 90 bp AAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTTTTTCATATGATCCCTaGAACCCATTTCCTGGCCAA +
Preference number: 5 (lower is better)
Translates to: KSKILLLLGSYRVTDYGTFSYDP*NPFPGQ
Trigger: TTGGCCAGGAAATGGGTTCAAGGGATCATATGAAAA...AGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp CAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTGATCATGTATTCTACTaGGGTGTTACCTGTGCTTCT +
Preference number: 5 (lower is better)
Translates to: QNLIATRIIQGHRLWHSVDHVFY*GVTCAS
Trigger: AGAAGCACAGGTAACACCCAAGTAGAATACATGATC...AACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp AGAAAGGCACCAGATAAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCGATCATGTATTCTACTaGGGTGTTACCTGTGCTTCT +
Preference number: 5 (lower is better)
Translates to: RKAPDKSKILLLLGSYRVDHVFY*GVTCAS
Trigger: AGAAGCACAGGTAACACCCAAGTAGAATACATGATC...GACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR CAA 90 bp GATGCCAGAAACTGTACATATTTCACTACATGCCTAAGTCTGGGTCTTCCTCTCAAGTCCAAAATCTTATaGCTACTAGGATCATACAGG +
Preference number: 5 (lower is better)
Translates to: DARNCTYFTTCLSLGLPLKSKIL*LLGSYR
Trigger: CCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT...GAGAGGAAGACCCAGACTTAGGCATGTAGTGAAATATGTACAGTTTCTGGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CAA 90 bp GGCGCATCTCCTTTTATTAATCTTTCTAATTGCTGTGATGTACCAAAGCAGAGTGGAGTAAAGCATTACTaGCTGGCGCATCTCCTTTTA +
Preference number: 5 (lower is better)
Translates to: GASPFINLSNCCDVPKQSGVKHY*LAHLLL
Trigger: TAAAAGGAGATGCGCCAGCAAGTAATGCTTTACTCC...ACTCTGCTTTGGTACATCACAGCAATTAGAAAGATTAATAAAAGGAGATGCGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS-3UTR CAA 90 bp GGCGCATCTCCTTTTATTAATCTTTCTAATTGCTGTGATGTACCAAAGCAGAGTGGTACTATCAGGAATTaGCTGAAGGTAAACAGCCAA +
Preference number: 5 (lower is better)
Translates to: GASPFINLSNCCDVPKQSGTIRN*LKVNSQ
Trigger: TTGGCTGTTTACCTTCAGCAAATTCCTGATAGTACC...ACTCTGCTTTGGTACATCACAGCAATTAGAAAGATTAATAAAAGGAGATGCGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS-3UTR CAA 90 bp AAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTAAGGATGAAGAAGCATaGTCCATCAAGCTTTTGAGT +
Preference number: 5 (lower is better)
Translates to: KSKILLLLGSYRVTDYGTKDEEA*SIKLLS
Trigger: ACTCAAAAGCTTGATGGACAATGCTTCTTCATCCTT...AGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR CAA 90 bp AATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGTTCTTGTACATCATCTaGACGAAGGTAGTAAATCAC +
Preference number: 5 (lower is better)
Translates to: NLIATRIIQGHRLWHSVQFLYII*TKVVNH
Trigger: GTGATTTACTACCTTCGTCAAGATGATGTACAAGAA...CTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000495038.5
CDS-3UTR CAA 90 bp AATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGTGTTGCAGCTTTGGCTaGGGCATAATTAAAGTTAAA +
Preference number: 5 (lower is better)
Translates to: NLIATRIIQGHRLWHSVQCCSFG*GIIKVK
Trigger: TTTAACTTTAATTATGCCCAAGCCAAAGCTGCAACA...CTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp ACATCAAAGATGTTTGTTATTGCAGCCAGGAGACAATGCCATAAAATGCTAACATTTCATCTTCTCACTTaGGATCAAGAGGAACGCCTC +
Preference number: 5 (lower is better)
Translates to: TSKMFVIAARRQCHKMLTFHLLT*DQEERL
Trigger: GAGGCGTTCCTCTTGATCCAAAGTGAGAAGATGAAA...TGTTAGCATTTTATGGCATTGTCTCCTGGCTGCAATAACAAACATCTTTGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR CAA 90 bp AATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGAAGTCCAAAATCTTATaGCTACTAGGATCATACAGG +
Preference number: 5 (lower is better)
Translates to: NLIATRIIQGHRLWHSVQKSKIL*LLGSYR
Trigger: CCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT...CTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp TCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGAAGTCCAAAATCTTATaGCTACTAGGATCATACAGG +
Preference number: 5 (lower is better)
Translates to: SKILLLLGSYRVTDYGTLKSKIL*LLGSYR
Trigger: CCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT...CAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp AAACAGCCAAAACTTCTTGAGACACATCATAGTAATCCAACTTGTAGTAGCAGACAAAGATGTTTGTTATaGCAGCCAGGAGACAATGCC +
Preference number: 5 (lower is better)
Translates to: KQPKLLETHHSNPTCSSRQRCLL*QPGDNA
Trigger: GGCATTGTCTCCTGGCTGCAATAACAAACATCTTTG...TCTGCTACTACAAGTTGGATTACTATGATGTGTCTCAAGAAGTTTTGGCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476296.1
CDS-3UTR CAA 90 bp AATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGCTTAAGAATGCTCAGTaGTATGTTATAAGAGCTCAG +
Preference number: 5 (lower is better)
Translates to: NLIATRIIQGHRLWHSVQLKNAQ*YVIRAQ
Trigger: CTGAGCTCTTATAACATACAACTGAGCATTCTTAAG...CTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CAA 90 bp AATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTCAGTCAACACAAGCTCATTaGAAAGTAAGTCTCCATCAA +
Preference number: 5 (lower is better)
Translates to: NLIATRIIQGHRLWHSVQSTQAH*KVSLHQ
Trigger: TTGATGGAGACTTACTTTCAAATGAGCTTGTGTTGA...CTGAACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430935.5
ENST00000464848.5
CDS-3UTR CAA 90 bp AAACAGATTAGTACTTTAAAACTTATCTCCTCCACAGTGAGGAGGGGTTCCCTTTCGTTATTCACCAGATaGTGCCTGATGAGTTCTTTA +
Preference number: 5 (lower is better)
Translates to: KQISTLKLISSTVRRGSLSLFTR*CLMSSL
Trigger: TAAAGAACTCATCAGGCACAATCTGGTGAATAACGA...AAGGGAACCCCTCCTCACTGTGGAGGAGATAAGTTTTAAAGTACTAATCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS-3UTR CAA 90 bp GGCGCATCTCCTTTTATTAATCTTTCTAATTGCTGTGATGTACCAAAGCAGAGTTTACAGGCTTTAAGATaGAGTGCGATGGTACTATCA +
Preference number: 5 (lower is better)
Translates to: GASPFINLSNCCDVPKQSLQALR*SAMVLS
Trigger: TGATAGTACCATCGCACTCAATCTTAAAGCCTGTAA...ACTCTGCTTTGGTACATCACAGCAATTAGAAAGATTAATAAAAGGAGATGCGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS-3UTR CAA 90 bp AAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTTGTTGCAGCTTTGGCTaGGGCATAATTAAAGTTAAA +
Preference number: 5 (lower is better)
Translates to: KSKILLLLGSYRVTDYGTCCSFG*GIIKVK
Trigger: TTTAACTTTAATTATGCCCAAGCCAAAGCTGCAACA...AGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp CAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTCTGTTTGTTGCAGCTTTGGCTaGGGCATAATTAAAGTTAAA +
Preference number: 5 (lower is better)
Translates to: QNLIATRIIQGHRLWHSVCCSFG*GIIKVK
Trigger: TTTAACTTTAATTATGCCCAAGCCAAAGCTGCAACA...AACAGAGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp AGCATTTTTGGAAGAAAGGCACCAGATAAGTCCAAAATCTTATTGCTACTAGGAGATCATGTATTCTACTaGGGTGTTACCTGTGCTTCT +
Preference number: 5 (lower is better)
Translates to: SIFGRKAPDKSKILLLLGDHVFY*GVTCAS
Trigger: AGAAGCACAGGTAACACCCAAGTAGAATACATGATC...TCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCTTCCAAAAATGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR CAA 90 bp AGAAAGGCACCAGATAAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCAAGTCCAAAATCTTATaGCTACTAGGATCATACAGG +
Preference number: 5 (lower is better)
Translates to: RKAPDKSKILLLLGSYRVKSKIL*LLGSYR
Trigger: CCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT...GACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR CAA 90 bp AAGTCCAAAATCTTATTGCTACTAGGATCATACAGGGTCACAGACTATGGCACTAAGTCCAAAATCTTATaGCTACTAGGATCATACAGG +
Preference number: 5 (lower is better)
Translates to: KSKILLLLGSYRVTDYGTKSKIL*LLGSYR
Trigger: CCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT...AGTGCCATAGTCTGTGACCCTGTATGATCCTAGTAGCAATAAGATTTTGGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
ENST00000495038.5
CDS-3UTR CAA 90 bp ACATCAAAGATGTTTGTTATTGCAGCCAGGAGACAATGCCATAAAATGCTAACAGAACATCAAAGATGTTaGTTATTGCAGCCAGGAGAC +
Preference number: 5 (lower is better)
Translates to: TSKMFVIAARRQCHKMLTEHQRC*LLQPGD
Trigger: GTCTCCTGGCTGCAATAACAAACATCTTTGATGTTC...TGTTAGCATTTTATGGCATTGTCTCCTGGCTGCAATAACAAACATCTTTGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR CAA 90 bp AGCATTTTTGGAAGAAAGGCACCAGATAAGTCCAAAATCTTATTGCTACTAGGAGAACATCAAAGATGTTaGTTATTGCAGCCAGGAGAC +
Preference number: 5 (lower is better)
Translates to: SIFGRKAPDKSKILLLLGEHQRC*LLQPGD
Trigger: GTCTCCTGGCTGCAATAACAAACATCTTTGATGTTC...TCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCTTCCAAAAATGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR CAA 90 bp CTTGCTGGCGCATCTCCTTTTATTAATCTTTCTAATTGCTGTGATGTACCAAAGTGGATCTACACTGCCTaGTGCTTCTTTCCAAATATT +
Preference number: 5 (lower is better)
Translates to: LAGASPFINLSNCCDVPKWIYTA*CFFPNI
Trigger: AATATTTGGAAAGAAGCACAAGGCAGTGTAGATCCA...CTTTGGTACATCACAGCAATTAGAAAGATTAATAAAAGGAGATGCGCCAGCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS-3UTR CAA 90 bp TCAAAGATGTTTGTTATTGCAGCCAGGAGACAATGCCATAAAATGCTAACAAAATTACAGGCTTTAAGATaGAGTGCGATGGTACTATCA +
Preference number: 5 (lower is better)
Translates to: SKMFVIAARRQCHKMLTKLQALR*SAMVLS
Trigger: TGATAGTACCATCGCACTCAATCTTAAAGCCTGTAA...TTTTGTTAGCATTTTATGGCATTGTCTCCTGGCTGCAATAACAAACATCTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
CDS-3UTR CAA 90 bp TTATTAATCTTTCTAATTGCTGTGATGTACCAAAGCAGAGTAGGACTGAACTCAAAGGATGAAGAAGCATaGTCCATCAAGCTTTTGAGT +
Preference number: 5 (lower is better)
Translates to: LLIFLIAVMYQSRVGLNSKDEEA*SIKLLS
Trigger: ACTCAAAAGCTTGATGGACAATGCTTCTTCATCCTT...TGAGTTCAGTCCTACTCTGCTTTGGTACATCACAGCAATTAGAAAGATTAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS-3UTR CAA 90 bp AGCATTTTTGGAAGAAAGGCACCAGATAAGTCCAAAATCTTATTGCTACTAGGATGTTGCAGCTTTGGCTaGGGCATAATTAAAGTTAAA +
Preference number: 5 (lower is better)
Translates to: SIFGRKAPDKSKILLLLGCCSFG*GIIKVK
Trigger: TTTAACTTTAATTATGCCCAAGCCAAAGCTGCAACA...TCCTAGTAGCAATAAGATTTTGGACTTATCTGGTGCCTTTCTTCCAAAAATGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
ENST00000478836.6
CDS-3UTR CAA 90 bp TCAAAGATGTTTGTTATTGCAGCCAGGAGACAATGCCATAAAATGCTAACAAAATTCTTGTACATCATCTaGACGAAGGTAGTAAATCAC +
Preference number: 5 (lower is better)
Translates to: SKMFVIAARRQCHKMLTKFLYII*TKVVNH
Trigger: GTGATTTACTACCTTCGTCAAGATGATGTACAAGAA...TTTTGTTAGCATTTTATGGCATTGTCTCCTGGCTGCAATAACAAACATCTTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000476296.1
CDS TCA 72 bp TTGGCCCTTGAAAGCATCATCTTGACGTCGGTCTTGTaGGTCCCCACCACACAGCGAAGGCCGCGCCTCAGC +
Preference number: 6 (lower is better)
Translates to: LALESIILTSVL*VPTTQRRPRLS
Trigger: GCTGAGGCGCGGCCTTCGCTGTGTGGTGGGGACTCACAAGACCGACGTCAAGATGATGCTTTCAAGGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000474035.6
ENST00000476296.1
ENST00000478836.6
ENST00000479132.5
ENST00000481482.5
ENST00000495038.5
CDS CAA 72 bp TTGTCAGTGTGCTGTACGCCTCTGCCTACAGCAGGTTaGGCCCTTGAAAGCATCATCTTGACGTCGGTCTTG +
Preference number: 6 (lower is better)
Translates to: LSVCCTPLPTAG*ALESIILTSVL
Trigger: CAAGACCGACGTCAAGATGATGCTTTCAAGGGCCAAACCTGCTGTAGGCAGAGGCGTACAGCACACTGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000468866.1
ENST00000474035.6
ENST00000476296.1
ENST00000478836.6
ENST00000479132.5
ENST00000481482.5
ENST00000495038.5
CDS GCA 72 bp CTTTCTTCTTTCTTTTGTCAGTGTGCTGTACGCCTCTaGCTACAGCAGGTTTGGCCCTTGAAAGCATCATCT +
Preference number: 6 (lower is better)
Translates to: LSSFFCQCAVRL*LQQVWPLKASS
Trigger: AGATGATGCTTTCAAGGGCCAAACCTGCTGTAGGCAGAGGCGTACAGCACACTGACAAAAGAAAGAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000468866.1
ENST00000474035.6
ENST00000476296.1
ENST00000478836.6
ENST00000479132.5
ENST00000481482.5
ENST00000495038.5
CDS CCA 72 bp TATTCTACTTGGGTGTTACCTGTGCTTCTCAGTAAATaGAGCACTTCTCGAAGGGTCTCTCTTGTAGCAGTC +
Preference number: 6 (lower is better)
Translates to: YSTWVLPVLLSK*STSRRVSLVAV
Trigger: GACTGCTACAAGAGAGACCCTTCGAGAAGTGCTCCATTTACTGAGAAGCACAGGTAACACCCAAGTAGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430935.5
CDS CAA 90 bp AGTAGGACTGAACTCAGTCAAGACGGGAAATCGTTATTCACCAGATaGTGCCTGATGAGTTCTTTAGCAAATTCAAAGGATGAAGAAGCA +
Preference number: 6 (lower is better)
Translates to: SRTELSQDGKSLFTR*CLMSSLANSKDEEA
Trigger: TGCTTCTTCATCCTTTGAATTTGCTAAAGAACTCATCAGGCACAATCTGGTGAATAACGATTTCCCGTCTTGACTGAGTTCAGTCCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS GCA 72 bp CTTCAGCTTGTTTATACATCCCAAGAAAGAAGTAGGTaGAAGCTAGGTTCACCCAGACTTCAGAATTACAAT +
Preference number: 6 (lower is better)
Translates to: LQLVYTSQERSR*KLGSPRLQNYN
Trigger: ATTGTAATTCTGAAGTCTGGGTGAACCTAGCTTGCACCTACTTCTTTCTTGGGATGTATAAACAAGCTGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000343187.8
ENST00000430935.5
ENST00000464848.5
ENST00000468866.1
ENST00000474035.6
ENST00000476296.1
ENST00000478836.6
ENST00000479132.5
ENST00000481482.5
ENST00000495038.5
CDS GCA 72 bp GAAATAAAAGGAGCTACAGGAGAGCCTATTGCTGCTTaGACTTTGATAGTCATTTTGTTCTCTTCCATACAC +
Preference number: 6 (lower is better)
Translates to: EIKGATGEPIAA*TLIVILFSSIH
Trigger: GTGTATGGAAGAGAACAAAATGACTATCAAAGTGCAAGCAGCAATAGGCTCTCCTGTAGCTCCTTTTATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481482.5
CDS GCA 72 bp TGGAGAAATAAAAGGAGCTACAGGAGAGCCTATTGCTaGTTGCACTTTGATAGTCATTTTGTTCTCTTCCAT +
Preference number: 6 (lower is better)
Translates to: WRNKRSYRRAYC*LHFDSHFVLFH
Trigger: ATGGAAGAGAACAAAATGACTATCAAAGTGCAAGCAGCAATAGGCTCTCCTGTAGCTCCTTTTATTTCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481482.5
CDS GCA 72 bp CTCAGTCAAGACGGGAAATCGTTATTCACCAGATTGTaGCTGATGAGTTCTTTAGCAAATTCAAAGGATGAA +
Preference number: 6 (lower is better)
Translates to: LSQDGKSLFTRL*LMSSLANSKDE
Trigger: TTCATCCTTTGAATTTGCTAAAGAACTCATCAGGCACAATCTGGTGAATAACGATTTCCCGTCTTGACTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS CAA 72 bp GAACTCAGTCAAGACGGGAAATCGTTATTCACCAGATaGTGCCTGATGAGTTCTTTAGCAAATTCAAAGGAT +
Preference number: 6 (lower is better)
Translates to: ELSQDGKSLFTR*CLMSSLANSKD
Trigger: ATCCTTTGAATTTGCTAAAGAACTCATCAGGCACAATCTGGTGAATAACGATTTCCCGTCTTGACTGAGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474035.6
CDS CAA 90 bp GGGATATGGAGAAATAAAAGGAGCTACAGGAGAGCCTATTGCTGCTaGCACTTTGATAGTCATTTTGTTCTCTTCCATACACTTATAACT +
Preference number: 6 (lower is better)
Translates to: GIWRNKRSYRRAYCC*HFDSHFVLFHTLIT
Trigger: AGTTATAAGTGTATGGAAGAGAACAAAATGACTATCAAAGTGCAAGCAGCAATAGGCTCTCCTGTAGCTCCTTTTATTTCTCCATATCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481482.5
CDS GCA 72 bp ATATGGAGAAATAAAAGGAGCTACAGGAGAGCCTATTaGTGCTTGCACTTTGATAGTCATTTTGTTCTCTTC +
Preference number: 6 (lower is better)
Translates to: IWRNKRSYRRAY*CLHFDSHFVLF
Trigger: GAAGAGAACAAAATGACTATCAAAGTGCAAGCAGCAATAGGCTCTCCTGTAGCTCCTTTTATTTCTCCATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481482.5
CDS CAA 72 bp AGAAATAAAAGGAGCTACAGGAGAGCCTATTGCTGCTaGCACTTTGATAGTCATTTTGTTCTCTTCCATACA +
Preference number: 6 (lower is better)
Translates to: RNKRSYRRAYCC*HFDSHFVLFHT
Trigger: TGTATGGAAGAGAACAAAATGACTATCAAAGTGCAAGCAGCAATAGGCTCTCCTGTAGCTCCTTTTATTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481482.5