RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTC23 (Homo sapiens)

Ensembl gene IDs: ENSG00000103852

Ensembl transcript IDs: ENST00000262074.8, ENST00000394129.6, ENST00000394132.7, ENST00000394135.7, ENST00000434594.5, ENST00000459771.5, ENST00000468436.1, ENST00000480371.1, ENST00000490671.1, ENST00000490688.2, ENST00000494567.1, ENST00000558078.5, ENST00000558438.1, ENST00000558663.5, ENST00000560235.1, ENST00000560279.5, ENST00000560772.5, ENST00000560860.5, ENST00000561365.5

Found 1053 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCAGGAAGCAGCTCCAGGTGGCATCCAGGTTTGTCCTGCCTGCAGTaGAGGCCACAGGAGGGATGCGAAGCAGCAGGGAGTCTGCGGTCT +
Preference number: 1 (lower is better)
Translates to: SGSSSRWHPGLSCLQ*RPQEGCEAAGSLRS
Trigger: AGACCGCAGACTCCCTGCTGCTTCGCATCCCTCCTGTGGCCTCCACTGCAGGCAGGACAAACCTGGATGCCACCTGGAGCTGCTTCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR TCA 90 bp CAGGGTGTCCTGAGGGATGCTGGTGCAGAAGGCCACTTTGGCTTTTaGTGCCTGCCTTGGCTTCGAAGCAACCTTGGGGGCCGTGGACAG +
Preference number: 1 (lower is better)
Translates to: QGVLRDAGAEGHFGF*CLPWLRSNLGGRGQ
Trigger: CTGTCCACGGCCCCCAAGGTTGCTTCGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCACCAGCATCCCTCAGGACACCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR TCA 90 bp CAGGGTGTCCTGAGGGATGCTGGTGCAGAAGGCCACTTTGGCTTTTaGTGCCTGCCTTGGCTTCGAAGCAACCTTGGGGGCCCTGGGCAA +
Preference number: 1 (lower is better)
Translates to: QGVLRDAGAEGHFGF*CLPWLRSNLGGPGQ
Trigger: TTGCCCAGGGCCCCCAAGGTTGCTTCGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCACCAGCATCCCTCAGGACACCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480371.1
3UTR CCA 90 bp AAGCAACCTTGGGGGCCGTGGACAGCATGCCCATGGCCTGCTGGGTaGCCAGAGTCCTTTTGTCCTGCGGTCCATATAAGAGGGTCTGGA +
Preference number: 1 (lower is better)
Translates to: KQPWGPWTACPWPAG*PESFCPAVHIRGSG
Trigger: TCCAGACCCTCTTATATGGACCGCAGGACAAAAGGACTCTGGCCACCCAGCAGGCCATGGGCATGCTGTCCACGGCCCCCAAGGTTGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR CCA 90 bp TTCGAAGCAACCTTGGGGGCCGTGGACAGCATGCCCATGGCCTGCTaGGTGGCCAGAGTCCTTTTGTCCTGCGGTCCATATAAGAGGGTC +
Preference number: 1 (lower is better)
Translates to: FEATLGAVDSMPMAC*VARVLLSCGPYKRV
Trigger: GACCCTCTTATATGGACCGCAGGACAAAAGGACTCTGGCCACCCAGCAGGCCATGGGCATGCTGTCCACGGCCCCCAAGGTTGCTTCGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR CCA 90 bp CCTGCACCCCTACCCCTGGGTGTTCCATCCACCTCGATCTGGCACTaGATCTCCTCGTTGACATCGTGGAGGAAGGCACTCAAAGCTTCC +
Preference number: 1 (lower is better)
Translates to: PAPLPLGVPSTSIWH*ISSLTSWRKALKAS
Trigger: GGAAGCTTTGAGTGCCTTCCTCCACGATGTCAACGAGGAGATCCAGTGCCAGATCGAGGTGGATGGAACACCCAGGGGTAGGGGTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR CCA 90 bp CCCACACCTGCACCCCTACCCCTGGGTGTTCCATCCACCTCGATCTaGCACTGGATCTCCTCGTTGACATCGTGGAGGAAGGCACTCAAA +
Preference number: 1 (lower is better)
Translates to: PTPAPLPLGVPSTSI*HWISSLTSWRKALK
Trigger: TTTGAGTGCCTTCCTCCACGATGTCAACGAGGAGATCCAGTGCCAGATCGAGGTGGATGGAACACCCAGGGGTAGGGGTGCAGGTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR CCA 90 bp ATGTCCGACAGGCCTGGGTCTGGGACCAGTGTGTACCAGCAAGCATaGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTC +
Preference number: 1 (lower is better)
Translates to: MSDRPGSGTSVYQQA*SVGSAVTLLRKTMV
Trigger: GACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGCTTGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCGGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR TCA 90 bp CTGGAAGCTGGGAAGTCTCAAGGTGCCAACAGTTTCATTTCCTGGTaGGGGCTCTCTTCCGGGCCTGCAGACGGCTGTCTTCTCACTGTG +
Preference number: 1 (lower is better)
Translates to: LEAGKSQGANSFISW*GLSSGPADGCLLTV
Trigger: CACAGTGAGAAGACAGCCGTCTGCAGGCCCGGAAGAGAGCCCTCACCAGGAAATGAAACTGTTGGCACCTTGAGACTTCCCAGCTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR GCA 90 bp TGCCATCCTCACACGACTATGGCCTCCTTCCAGGGGGCTGAAGACTaGTGTGTACACGATAGTGTGCCAACTCAGGAAGCAGCTCCAGGT +
Preference number: 1 (lower is better)
Translates to: CHPHTTMASFQGAED*CVHDSVPTQEAAPG
Trigger: ACCTGGAGCTGCTTCCTGAGTTGGCACACTATCGTGTACACAGCAGTCTTCAGCCCCCTGGAAGGAGGCCATAGTCGTGTGAGGATGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR TCA 90 bp CCCTGGGTGTTCCATCCACCTCGATCTGGCACTGGATCTCCTCGTTaGCATCGTGGAGGAAGGCACTCAAAGCTTCCTGTTCGACTTTGC +
Preference number: 1 (lower is better)
Translates to: PWVFHPPRSGTGSPR*HRGGRHSKLPVRLC
Trigger: GCAAAGTCGAACAGGAAGCTTTGAGTGCCTTCCTCCACGATGTCAACGAGGAGATCCAGTGCCAGATCGAGGTGGATGGAACACCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR GCA 90 bp GTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTaGTTCTCTCCACCCTGTCGTGGCTCTACTGAGTTTATTTTCCCC +
Preference number: 1 (lower is better)
Translates to: VCGVSCHAPEEDNGP*FSPPCRGSTEFIFP
Trigger: GGGGAAAATAAACTCAGTAGAGCCACGACAGGGTGGAGAGAAGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR GCA 90 bp CCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTaGACAGGGCGCACTGAACTGTTGAAGAGAAGTTTTTCAGCCACA +
Preference number: 1 (lower is better)
Translates to: PMQGAVCTSRCRADS*TGRTELLKRSFSAT
Trigger: TGTGGCTGAAAAACTTCTCTTCAACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
3UTR GCA 90 bp AGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATaGCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTTGAAGAGA +
Preference number: 1 (lower is better)
Translates to: RSNSTPMQGAVCTSR*RADSCTGRTELLKR
Trigger: TCTCTTCAACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
3UTR CCA 90 bp GTTCCATCCACCTCGATCTGGCACTGGATCTCCTCGTTGACATCGTaGAGGAAGGCACTCAAAGCTTCCTGTTCGACTTTGCCATCCTCA +
Preference number: 1 (lower is better)
Translates to: VPSTSIWHWISSLTS*RKALKASCSTLPSS
Trigger: TGAGGATGGCAAAGTCGAACAGGAAGCTTTGAGTGCCTTCCTCCACGATGTCAACGAGGAGATCCAGTGCCAGATCGAGGTGGATGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR GCA 90 bp TCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTaGATGTTGGGGCCAACAGTTGGCCTTGGAAATCTGTATCCTGAC +
Preference number: 1 (lower is better)
Translates to: STVKMWPTGGLWSHC*MLGPTVGLGNLYPD
Trigger: GTCAGGATACAGATTTCCAAGGCCAACTGTTGGCCCCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
3UTR GCA 90 bp AAAGGACTTCCTGAAGTTCACTGTCCAGATCTAACTCCACACCTATaGAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCA +
Preference number: 1 (lower is better)
Translates to: KGLPEVHCPDLTPHL*KELCVQADAGLTPA
Trigger: TGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAACTTCAGGAAGTCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
3UTR CCA 90 bp TCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTaGGGCCAACAGTTGGCCTTGGAAATCTGTATCCTGACTGTTGAA +
Preference number: 1 (lower is better)
Translates to: SKCGPREAYGLTVAC*GQQLALEICILTVE
Trigger: TTCAACAGTCAGGATACAGATTTCCAAGGCCAACTGTTGGCCCCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
3UTR GCA 90 bp CAAACATTTATTTCTTACAGTTCTGGAAGCTGGGAAGTCTCAAGGTaGCAACAGTTTCATTTCCTGGTGAGGGCTCTCTTCCGGGCCTGC +
Preference number: 1 (lower is better)
Translates to: QTFISYSSGSWEVSR*QQFHFLVRALFRAC
Trigger: GCAGGCCCGGAAGAGAGCCCTCACCAGGAAATGAAACTGTTGGCACCTTGAGACTTCCCAGCTTCCAGAACTGTAAGAAATAAATGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR TCA 90 bp AAACCCCTTTTCAGGCTCCGAAGAACTCTGAGGCAGGCTGCACTTTaGAAACACATGCTGACAGCAGCGTGTTCAGGTTTCCCTTTATTA +
Preference number: 1 (lower is better)
Translates to: KPLFRLRRTLRQAAL*KHMLTAACSGFPLL
Trigger: TAATAAAGGGAAACCTGAACACGCTGCTGTCAGCATGTGTTTTCAAAGTGCAGCCTGCCTCAGAGTTCTTCGGAGCCTGAAAAGGGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR CCA 90 bp CGACAGGCCTGGGTCTGGGACCAGTGTGTACCAGCAAGCATGGTCTGTGGGGTCCAACCTTGGGGGCCGTaGACAGCATGCCCATGGCCT +
Preference number: 2 (lower is better)
Translates to: RQAWVWDQCVPASMVCGVQPWGP*TACPWP
Trigger: AGGCCATGGGCATGCTGTCCACGGCCCCCAAGGTTG...GACCCCACAGACCATGCTTGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR CAA 90 bp GCAGGGTGTCCTGAGGGATGCTGGTGCAGAAGGCCACTTTGGCTTTaGATGCCTGCCTTGGCTTCGAAGCAACCTTGGGGGCCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: AGCPEGCWCRRPLWL*MPALASKQPWGPWA
Trigger: TGCCCAGGGCCCCCAAGGTTGCTTCGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCACCAGCATCCCTCAGGACACCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480371.1
3UTR-3UTR GCA 90 bp GCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCTTGCCGGGCTGACTCCTaGACAGGGCGCACTGAACTG +
Preference number: 2 (lower is better)
Translates to: AWSVGSAVTLLRKTMVPACRADS*TGRTEL
Trigger: CAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCA...AGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR CAA 90 bp GAGGGATGCTGGTGCAGAAGGCCACTTTGGCTTTTGATGCCTGCCTaGGCTTCGAAGCAACCTTGGGGGCCGTGGACAGCATGCCCATGG +
Preference number: 2 (lower is better)
Translates to: EGCWCRRPLWLLMPA*ASKQPWGPWTACPW
Trigger: CCATGGGCATGCTGTCCACGGCCCCCAAGGTTGCTTCGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCACCAGCATCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR CAA 90 bp GCAGGGTGTCCTGAGGGATGCTGGTGCAGAAGGCCACTTTGGCTTTaGATGCCTGCCTTGGCTTCGAAGCAACCTTGGGGGCCGTGGACA +
Preference number: 2 (lower is better)
Translates to: AGCPEGCWCRRPLWL*MPALASKQPWGPWT
Trigger: TGTCCACGGCCCCCAAGGTTGCTTCGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCACCAGCATCCCTCAGGACACCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR-3UTR TCA 90 bp GGGCTGAAGACTGCTGTGTACACGATAGTGTGCCAACTCAGGAAGCAGCTCCAGAAGCAGATGCCGGGCTaGCTCCTGCACAGGGCGCAC +
Preference number: 2 (lower is better)
Translates to: GLKTAVYTIVCQLRKQLQKQMPG*LLHRAH
Trigger: GTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTT...CTGGAGCTGCTTCCTGAGTTGGCACACTATCGTGTACACAGCAGTCTTCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR GCA 90 bp GCAAGCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCATCACTGCCCACACCTaGACCCCTACCCCTGGGTGT +
Preference number: 2 (lower is better)
Translates to: ASMVCGVSCHAPEEDNGPITAHT*TPTPGC
Trigger: ACACCCAGGGGTAGGGGTGCAGGTGTGGGCAGTGAT...GGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR CAA 90 bp GCCGTGGACAGCATGCCCATGGCCTGCTGGGTGGCCAGAGTCCTTTaGTCCTGCGGTCCATATAAGAGGGTCTGGATCTGGAGACACTGT +
Preference number: 2 (lower is better)
Translates to: AVDSMPMACWVARVL*SCGPYKRVWIWRHC
Trigger: ACAGTGTCTCCAGATCCAGACCCTCTTATATGGACCGCAGGACAAAAGGACTCTGGCCACCCAGCAGGCCATGGGCATGCTGTCCACGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR-3UTR GCA 90 bp GTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTTGGGGTGTCCTGAGGGATaGTGGTGCAGAAGGCCACTT +
Preference number: 2 (lower is better)
Translates to: VCTSRCRADSCTGRTELLGCPEG*WCRRPL
Trigger: AAGTGGCCTTCTGCACCAGCATCCCTCAGGACACCC...CAACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000459771.5
ENST00000480371.1
3UTR-3UTR CCA 90 bp CTGGTGCAGAAGGCCACTTTGGCTTTTGATGCCTGCCTTGGCTTCGAAGCAACCTGGACAGCATGCCCATaGCCTGCTGGGTGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: LVQKATLAFDACLGFEATWTACP*PAGWPE
Trigger: CTCTGGCCACCCAGCAGGCCATGGGCATGCTGTCCA...GGTTGCTTCGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR-3UTR CCA 90 bp GTACCAGCAAGCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATCTTACACCTGCCTCCTaGGCCCCAGGCCAAGTCAGG +
Preference number: 2 (lower is better)
Translates to: VPASMVCGVSCHAPEEDNLTPAS*APGQVR
Trigger: CCTGACTTGGCCTGGGGCCCAGGAGGCAGGTGTAAG...ATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGCTTGCTGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR CCA 90 bp GTCTGGGACCAGTGTGTACCAGCAAGCATGGTCTGTGGGGTCAGCTGTCACGCTGGAAGCAGCTCCAGGTaGCATCCAGGTTTGTCCTGC +
Preference number: 2 (lower is better)
Translates to: VWDQCVPASMVCGVSCHAGSSSR*HPGLSC
Trigger: GCAGGACAAACCTGGATGCCACCTGGAGCTGCTTCC...AGCGTGACAGCTGACCCCACAGACCATGCTTGCTGGTACACACTGGTCCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR TCA 90 bp CCAGGCCAAGTCAGGTGTGTCGGCCTCCTGCCCCTCCTACTGGGCTCTTTCTCACTGCACAGGGCGCACTaGACTGTTGAAGAGAAGTTT +
Preference number: 2 (lower is better)
Translates to: PGQVRCVGLLPLLLGSFSLHRAH*TVEEKF
Trigger: AAACTTCTCTTCAACAGTTCAGTGCGCCCTGTGCAG...TGAGAAAGAGCCCAGTAGGAGGGGCAGGAGGCCGACACACCTGACTTGGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR TCA 90 bp GCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCTGGCTCCGAAGAACTCTaGGGCAGGCTGCACTTTGAA +
Preference number: 2 (lower is better)
Translates to: AWSVGSAVTLLRKTMVPAGSEEL*GRLHFE
Trigger: TTCAAAGTGCAGCCTGCCTCAGAGTTCTTCGGAGCC...AGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR GCA 90 bp GTACCAGCAAGCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATAGCATGCCCATGGCCTaGTGGGTGGCCAGAGTCCTT +
Preference number: 2 (lower is better)
Translates to: VPASMVCGVSCHAPEEDNSMPMA*WVARVL
Trigger: AAGGACTCTGGCCACCCAGCAGGCCATGGGCATGCT...ATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGCTTGCTGGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR-3UTR GCA 90 bp GCAAGCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCCCTGAGGGATGCTGGTaGAGAAGGCCACTTTGGCTT +
Preference number: 2 (lower is better)
Translates to: ASMVCGVSCHAPEEDNGPPEGCW*RRPLWL
Trigger: AAGCCAAAGTGGCCTTCTGCACCAGCATCCCTCAGG...GGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR CAA 90 bp GAGGGATGCTGGTGCAGAAGGCCACTTTGGCTTTTGATGCCTGCCTaGGCTTCGAAGCAACCTTGGGGGCCCTGGGCAAGGAAGATCTTT +
Preference number: 2 (lower is better)
Translates to: EGCWCRRPLWLLMPA*ASKQPWGPWARKIF
Trigger: AAAGATCTTCCTTGCCCAGGGCCCCCAAGGTTGCTTCGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCACCAGCATCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480371.1
3UTR-3UTR GCA 90 bp TGTCGTGGCTCTACTGAGTTTATTTTCCCCATCAATACTGGAGGTGGTGCCCTGCTCAGTCTGCTGTTGTaGCGGGCCGGGCCTTCCCCA +
Preference number: 2 (lower is better)
Translates to: CRGSTEFIFPINTGGGALLSLLL*RAGPSP
Trigger: TGGGGAAGGCCCGGCCCGGCACAACAGCAGACTGAG...CAGGGCACCACCTCCAGTATTGATGGGGAAAATAAACTCAGTAGAGCCACGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR-3UTR GCA 90 bp TGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCTTCTGTGTGTACAAGCAGATaGCGGGCTGACTCCTGCACA +
Preference number: 2 (lower is better)
Translates to: WSVGSAVTLLRKTMVPASVCTSR*RADSCT
Trigger: TGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACAC...AGAAGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR CCA 90 bp GTACCAGCAAGCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGAAGCAGCTCCAGGTaGCATCCAGGTTTGTCCTGC +
Preference number: 2 (lower is better)
Translates to: VPASMVCGVSCHAPEEDNGSSSR*HPGLSC
Trigger: GCAGGACAAACCTGGATGCCACCTGGAGCTGCTTCC...ATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGCTTGCTGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR CAA 90 bp CCCCTGGGTGTTCCATCCACCTCGATCTGGCACTGGATCTCCTCGTaGACATCGTGGAGGAAGGCACTCAAAGCTTCCTGTTCGACTTTG +
Preference number: 2 (lower is better)
Translates to: PLGVPSTSIWHWISS*TSWRKALKASCSTL
Trigger: CAAAGTCGAACAGGAAGCTTTGAGTGCCTTCCTCCACGATGTCAACGAGGAGATCCAGTGCCAGATCGAGGTGGATGGAACACCCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR TCA 90 bp CGACAGGCCTGGGTCTGGGACCAGTGTGTACCAGCAAGCATGGTCTGTGGGGTCCTGTCGTGGCTCTACTaGGTTTATTTTCCCCATCAA +
Preference number: 2 (lower is better)
Translates to: RQAWVWDQCVPASMVCGVLSWLY*VYFPHQ
Trigger: TTGATGGGGAAAATAAACTCAGTAGAGCCACGACAG...GACCCCACAGACCATGCTTGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR GCA 90 bp TGTCGTGGCTCTACTGAGTTTATTTTCCCCATCAATACTGGAGGTGGTGCCCTGTGCCGGGCTGACTCCTaGACAGGGCGCACTGAACTG +
Preference number: 2 (lower is better)
Translates to: CRGSTEFIFPINTGGGALCRADS*TGRTEL
Trigger: CAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCA...CAGGGCACCACCTCCAGTATTGATGGGGAAAATAAACTCAGTAGAGCCACGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR GCA 90 bp GCCTGGGTCTGGGACCAGTGTGTACCAGCAAGCATGGTCTGTGGGGTCAGCTGTCTTCCTGTTCGACTTTaGCATCCTCACACGACTATG +
Preference number: 2 (lower is better)
Translates to: AWVWDQCVPASMVCGVSCLPVRL*HPHTTM
Trigger: CATAGTCGTGTGAGGATGGCAAAGTCGAACAGGAAG...ACAGCTGACCCCACAGACCATGCTTGCTGGTACACACTGGTCCCAGACCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR GCA 90 bp CCCTGTCGTGGCTCTACTGAGTTTATTTTCCCCATCAATACTGGAGGTGGTGCCGGGAAGGGACATCACTaGCCACACCTGCACCCCTAC +
Preference number: 2 (lower is better)
Translates to: PCRGSTEFIFPINTGGGAGKGHH*PHLHPY
Trigger: GTAGGGGTGCAGGTGTGGGCAGTGATGTCCCTTCCC...GGCACCACCTCCAGTATTGATGGGGAAAATAAACTCAGTAGAGCCACGACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR CCA 90 bp CTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCATGGCCTGCTGGGTaGCCAGAGTCCTTTTGTCCT +
Preference number: 2 (lower is better)
Translates to: LTPHLCKELCVQADAGLTPWPAG*PESFCP
Trigger: AGGACAAAAGGACTCTGGCCACCCAGCAGGCCATGG...AGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR-3UTR CCA 90 bp GAGGAAGGCACTCAAAGCTTCCTGTTCGACTTTGCCATCCTCACACGACTATGGGCTTCGAAGCAACCTTaGGGGCCGTGGACAGCATGC +
Preference number: 2 (lower is better)
Translates to: EEGTQSFLFDFAILTRLWASKQP*GPWTAC
Trigger: GCATGCTGTCCACGGCCCCCAAGGTTGCTTCGAAGC...CCATAGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGCTTTGAGTGCCTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR-3UTR CCA 90 bp AGCACACTGCTGATGTCCGACAGGCCTGGGTCTGGGACCAGTGTGTACCAGCAATCCTCGTTGACATCGTaGAGGAAGGCACTCAAAGCT +
Preference number: 2 (lower is better)
Translates to: STLLMSDRPGSGTSVYQQSSLTS*RKALKA
Trigger: AGCTTTGAGTGCCTTCCTCCACGATGTCAACGAGGA...TTGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCGGACATCAGCAGTGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR CCA 90 bp TGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCTTCTACCTCGATCTGGCACTaGATCTCCTCGTTGACATCG +
Preference number: 2 (lower is better)
Translates to: WSVGSAVTLLRKTMVPASTSIWH*ISSLTS
Trigger: CGATGTCAACGAGGAGATCCAGTGCCAGATCGAGGT...AGAAGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR TCA 90 bp CTGGATCTCCTCGTTGACATCGTGGAGGAAGGCACTCAAAGCTTCCTGTTCGACGGCTCCGAAGAACTCTaGGGCAGGCTGCACTTTGAA +
Preference number: 2 (lower is better)
Translates to: LDLLVDIVEEGTQSFLFDGSEEL*GRLHFE
Trigger: TTCAAAGTGCAGCCTGCCTCAGAGTTCTTCGGAGCC...GTCGAACAGGAAGCTTTGAGTGCCTTCCTCCACGATGTCAACGAGGAGATCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR GCA 90 bp GCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCTAGAGTCCTTTTGTCCTaGGGTCCATATAAGAGGGTC +
Preference number: 2 (lower is better)
Translates to: AWSVGSAVTLLRKTMVPARVLLS*GPYKRV
Trigger: GACCCTCTTATATGGACCGCAGGACAAAAGGACTCT...AGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR-3UTR GCA 90 bp AGCTTCCTGTTCGACTTTGCCATCCTCACACGACTATGGCCTCCTTCCAGGGGGTTGGCTTTTGATGCCTaGCTTGGCTTCGAAGCAACC +
Preference number: 2 (lower is better)
Translates to: SFLFDFAILTRLWPPSRGLAFDA*LGFEAT
Trigger: GGTTGCTTCGAAGCCAAGGCAGGCATCAAAAGCCAA...CCCCCTGGAAGGAGGCCATAGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR-3UTR GCA 90 bp GAAGTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAACTCAGTCTGCTGTTGTaGCGGGCCGGGCCTTCCCCA +
Preference number: 2 (lower is better)
Translates to: EVHCPDLTPHLCKELCVQLSLLL*RAGPSP
Trigger: TGGGGAAGGCCCGGCCCGGCACAACAGCAGACTGAG...TTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR-3UTR CCA 90 bp CACACTGCTGATGTCCGACAGGCCTGGGTCTGGGACCAGTGTGTACCAGCAAGCCCATATAAGAGGGTCTaGATCTGGAGACACTGTAGA +
Preference number: 2 (lower is better)
Translates to: HTADVRQAWVWDQCVPASPYKRV*IWRHCR
Trigger: TCTACAGTGTCTCCAGATCCAGACCCTCTTATATGG...GCTTGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCGGACATCAGCAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR-3UTR CCA 90 bp TGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCTTCTGTTGGGGCCAACAGTTaGCCTTGGAAATCTGTATCC +
Preference number: 2 (lower is better)
Translates to: WSVGSAVTLLRKTMVPASVGANS*PWKSVS
Trigger: GGATACAGATTTCCAAGGCCAACTGTTGGCCCCAAC...AGAAGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR CCA 90 bp CAGGGGGCTGAAGACTGCTGTGTACACGATAGTGTGCCAACTCAGGAAGCAGCTTCCACTGTCAAAATGTaGCCCACGGGAGGCTTATGG +
Preference number: 2 (lower is better)
Translates to: QGAEDCCVHDSVPTQEAASTVKM*PTGGLW
Trigger: CCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGA...AGCTGCTTCCTGAGTTGGCACACTATCGTGTACACAGCAGTCTTCAGCCCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR CCA 90 bp TGGGCCCCAGGCCAAGTCAGGTGTGTCGGCCTCCTGCCCCTCCTACTGGGCTCTGGTAAAAATTCTTGTTaGCAAGAAAAACCACTTAGG +
Preference number: 2 (lower is better)
Translates to: WAPGQVRCVGLLPLLLGSGKNSC*QEKPLR
Trigger: CCTAAGTGGTTTTTCTTGCCAACAAGAATTTTTACC...AGAGCCCAGTAGGAGGGGCAGGAGGCCGACACACCTGACTTGGCCTGGGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR CCA 90 bp TCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCTTCTCTCTCCTCGTTGACATCGTaGAGGAAGGCACTCAAAGCT +
Preference number: 2 (lower is better)
Translates to: SVGSAVTLLRKTMVPASLSSLTS*RKALKA
Trigger: AGCTTTGAGTGCCTTCCTCCACGATGTCAACGAGGA...GAGAGAAGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR CCA 90 bp AGTAGTGACATCTTACACGTTTTTAGCACACTGCTGATGTCCGACAGGCCTGGGCTGCACCCCTACCCCTaGGTGTTCCATCCACCTCGA +
Preference number: 2 (lower is better)
Translates to: SSDILHVFSTLLMSDRPGLHPYP*VFHPPR
Trigger: TCGAGGTGGATGGAACACCCAGGGGTAGGGGTGCAG...CCCAGGCCTGTCGGACATCAGCAGTGTGCTAAAAACGTGTAAGATGTCACTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR GCA 90 bp GCTTCCTGTTCGACTTTGCCATCCTCACACGACTATGGCCTCCTTCCAGGGGGCCTAACTCCACACCTATaGAAGGAGCTGTGTGTACAA +
Preference number: 2 (lower is better)
Translates to: ASCSTLPSSHDYGLLPGGLTPHL*KELCVQ
Trigger: TTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAG...GCCCCCTGGAAGGAGGCCATAGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR GCA 90 bp GGAAGCTGGGAAGTCTCAAGGTGCCAACAGTTTCATTTCCTGGTGAGGGCTCTCCAGGGGGCTGAAGACTaGTGTGTACACGATAGTGTG +
Preference number: 2 (lower is better)
Translates to: GSWEVSRCQQFHFLVRALQGAED*CVHDSV
Trigger: CACACTATCGTGTACACAGCAGTCTTCAGCCCCCTG...GAGAGCCCTCACCAGGAAATGAAACTGTTGGCACCTTGAGACTTCCCAGCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR CCA 90 bp AGTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCGCTTCGAAGCAACCTTaGGGGCCGTGGACAGCATGC +
Preference number: 2 (lower is better)
Translates to: SSLSRSNSTPMQGAVCTSASKQP*GPWTAC
Trigger: GCATGCTGTCCACGGCCCCCAAGGTTGCTTCGAAGC...GCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR-3UTR CCA 90 bp CCCTCCTACTGGGCTCTTTCTCAAACCCCTTTTCAGGCTCCGAAGAACTCTGAGCTCACTGTTGCATGTTaGGGCCAACAGTTGGCCTTG +
Preference number: 2 (lower is better)
Translates to: PSYWALSQTPFQAPKNSELTVAC*GQQLAL
Trigger: CAAGGCCAACTGTTGGCCCCAACATGCAACAGTGAG...CTCAGAGTTCTTCGGAGCCTGAAAAGGGGTTTGAGAAAGAGCCCAGTAGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR CCA 90 bp GGAAGCTGGGAAGTCTCAAGGTGCCAACAGTTTCATTTCCTGGTGAGGGCTCTCCCCACGGGAGGCTTATaGTCTCACTGTTGCATGTTG +
Preference number: 2 (lower is better)
Translates to: GSWEVSRCQQFHFLVRALPTGGL*SHCCML
Trigger: CAACATGCAACAGTGAGACCATAAGCCTCCCGTGGG...GAGAGCCCTCACCAGGAAATGAAACTGTTGGCACCTTGAGACTTCCCAGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR CCA 90 bp CCCTCCTACTGGGCTCTTTCTCAAACCCCTTTTCAGGCTCCGAAGAACTCTGAGCCCACGGGAGGCTTATaGTCTCACTGTTGCATGTTG +
Preference number: 2 (lower is better)
Translates to: PSYWALSQTPFQAPKNSEPTGGL*SHCCML
Trigger: CAACATGCAACAGTGAGACCATAAGCCTCCCGTGGG...CTCAGAGTTCTTCGGAGCCTGAAAAGGGGTTTGAGAAAGAGCCCAGTAGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR TCA 90 bp GGAAGCTGGGAAGTCTCAAGGTGCCAACAGTTTCATTTCCTGGTGAGGGCTCTCCTGCACAGGGCGCACTaGACTGTTGAAGAGAAGTTT +
Preference number: 2 (lower is better)
Translates to: GSWEVSRCQQFHFLVRALLHRAH*TVEEKF
Trigger: AAACTTCTCTTCAACAGTTCAGTGCGCCCTGTGCAG...GAGAGCCCTCACCAGGAAATGAAACTGTTGGCACCTTGAGACTTCCCAGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR GCA 90 bp TGTCGTGGCTCTACTGAGTTTATTTTCCCCATCAATACTGGAGGTGGTGCCCTGCCCTGTGCTGCAATCTaGTGTCATAGCACCAGCCTG +
Preference number: 2 (lower is better)
Translates to: CRGSTEFIFPINTGGGALPCAAI*CHSTSL
Trigger: CAGGCTGGTGCTATGACAGCAGATTGCAGCACAGGG...CAGGGCACCACCTCCAGTATTGATGGGGAAAATAAACTCAGTAGAGCCACGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR GCA 90 bp AGTAGTGACATCTTACACGTTTTTAGCACACTGCTGATGTCCGACAGGCCTGGGCCCTGTGCTGCAATCTaGTGTCATAGCACCAGCCTG +
Preference number: 2 (lower is better)
Translates to: SSDILHVFSTLLMSDRPGPCAAI*CHSTSL
Trigger: CAGGCTGGTGCTATGACAGCAGATTGCAGCACAGGG...CCCAGGCCTGTCGGACATCAGCAGTGTGCTAAAAACGTGTAAGATGTCACTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR CCA 90 bp CTTCCTGAAGTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTATGCCCATGGCCTGCTaGGTGGCCAGAGTCCTTTTG +
Preference number: 2 (lower is better)
Translates to: LPEVHCPDLTPHLCKELCMPMAC*VARVLL
Trigger: CAAAAGGACTCTGGCCACCCAGCAGGCCATGGGCAT...ACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAACTTCAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR-3UTR CCA 90 bp TGGATCTCCTCGTTGACATCGTGGAGGAAGGCACTCAAAGCTTCCTGTTCGACTTCCACTGTCAAAATGTaGCCCACGGGAGGCTTATGG +
Preference number: 2 (lower is better)
Translates to: WISSLTSWRKALKASCSTSTVKM*PTGGLW
Trigger: CCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGA...AGTCGAACAGGAAGCTTTGAGTGCCTTCCTCCACGATGTCAACGAGGAGATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR TCA 90 bp ACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTTTTTCTAGGCGGAGGTaGTTTGTACAGCACCCTAAA +
Preference number: 2 (lower is better)
Translates to: TPHLCKELCVQADAGLTPFSRRR*FVQHPK
Trigger: TTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAA...AGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
3UTR-3UTR GCA 90 bp TCATGTTATTCTCAATCCCTATTAGCCTCCTATAAGAAAGGACTTCCTGAAGTTGTGGGGGCCTCAGTCTaGTGTTGTGCCGGGCCGGGC +
Preference number: 2 (lower is better)
Translates to: SCYSQSLLASYKKGLPEVVGASV*CCAGPG
Trigger: GCCCGGCCCGGCACAACAGCAGACTGAGGCCCCCAC...AACTTCAGGAAGTCCTTTCTTATAGGAGGCTAATAGGGATTGAGAATAACATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR-3UTR CCA 90 bp TCGTTGACATCGTGGAGGAAGGCACTCAAAGCTTCCTGTTCGACTTTGCCATCCGTTGGGGCCAACAGTTaGCCTTGGAAATCTGTATCC +
Preference number: 2 (lower is better)
Translates to: SLTSWRKALKASCSTLPSVGANS*PWKSVS
Trigger: GGATACAGATTTCCAAGGCCAACTGTTGGCCCCAAC...GGATGGCAAAGTCGAACAGGAAGCTTTGAGTGCCTTCCTCCACGATGTCAACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR CCA 90 bp AGTAGTGACATCTTACACGTTTTTAGCACACTGCTGATGTCCGACAGGCCTGGGCTCACTGTTGCATGTTaGGGCCAACAGTTGGCCTTG +
Preference number: 2 (lower is better)
Translates to: SSDILHVFSTLLMSDRPGLTVAC*GQQLAL
Trigger: CAAGGCCAACTGTTGGCCCCAACATGCAACAGTGAG...CCCAGGCCTGTCGGACATCAGCAGTGTGCTAAAAACGTGTAAGATGTCACTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR CAA 90 bp ACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTaGAAGAGAAGTTTTTCAGCCACAGTAGTGCTGATGGGTAAAAAT +
Preference number: 2 (lower is better)
Translates to: TSRCRADSCTGRTEL*KRSFSATVVLMGKN
Trigger: ATTTTTACCCATCAGCACTACTGTGGCTGAAAAACTTCTCTTCAACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
3UTR-3UTR TCA 90 bp TGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGCCACTTTGGCTTTTaGTGCCTGCCTTGGCTTCGA +
Preference number: 2 (lower is better)
Translates to: CFIAYITLKGIHCQNVAHGHFGF*CLPWLR
Trigger: TCGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCC...GTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000459771.5
ENST00000480371.1
3UTR-3UTR TCA 90 bp CGTGGAGGAAGGCACTCAAAGCTTCCTGTTCGACTTTGCCATCCTCACACGACTCTGTATCCTGACTGTTaGATTCCATTTTCTAGGCGG +
Preference number: 2 (lower is better)
Translates to: RGGRHSKLPVRLCHPHTTLYPDC*IPFSRR
Trigger: CCGCCTAGAAAATGGAATTCAACAGTCAGGATACAG...AGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGCTTTGAGTGCCTTCCTCCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR TCA 90 bp GCAAGCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGGAAATCTGTATCCTaGCTGTTGAATTCCATTTTC +
Preference number: 2 (lower is better)
Translates to: ASMVCGVSCHAPEEDNGPWKSVS*LLNSIF
Trigger: GAAAATGGAATTCAACAGTCAGGATACAGATTTCCA...GGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR GCA 90 bp AGTAGTGACATCTTACACGTTTTTAGCACACTGCTGATGTCCGACAGGCCTGGGGTGTACACGATAGTGTaGCAACTCAGGAAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: SSDILHVFSTLLMSDRPGVYTIV*QLRKQL
Trigger: GAGCTGCTTCCTGAGTTGGCACACTATCGTGTACAC...CCCAGGCCTGTCGGACATCAGCAGTGTGCTAAAAACGTGTAAGATGTCACTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR CCA 90 bp ATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCGGTAAAAATTCTTGTTaGCAAGAAAAACCACTTAGG +
Preference number: 2 (lower is better)
Translates to: MQGAVCTSRCRADSCTGRGKNSC*QEKPLR
Trigger: CCTAAGTGGTTTTTCTTGCCAACAAGAATTTTTACC...GCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
3UTR-3UTR CCA 90 bp ACCTGCACCCCTACCCCTGGGTGTTCCATCCACCTCGATCTGGCACTGGATCTCGGTAAAAATTCTTGTTaGCAAGAAAAACCACTTAGG +
Preference number: 2 (lower is better)
Translates to: TCTPTPGCSIHLDLALDLGKNSC*QEKPLR
Trigger: CCTAAGTGGTTTTTCTTGCCAACAAGAATTTTTACC...GAGATCCAGTGCCAGATCGAGGTGGATGGAACACCCAGGGGTAGGGGTGCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR CCA 90 bp AGTAGTGACATCTTACACGTTTTTAGCACACTGCTGATGTCCGACAGGCCTGGGTTTCCCCATCAATACTaGAGGTGGTGCCCTGCACAA +
Preference number: 2 (lower is better)
Translates to: SSDILHVFSTLLMSDRPGFPHQY*RWCPAQ
Trigger: TTGTGCAGGGCACCACCTCCAGTATTGATGGGGAAA...CCCAGGCCTGTCGGACATCAGCAGTGTGCTAAAAACGTGTAAGATGTCACTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR GCA 90 bp CCCTGTCGTGGCTCTACTGAGTTTATTTTCCCCATCAATACTGGAGGTGGTGCCCTAACTCCACACCTATaGAAGGAGCTGTGTGTACAA +
Preference number: 2 (lower is better)
Translates to: PCRGSTEFIFPINTGGGALTPHL*KELCVQ
Trigger: TTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAG...GGCACCACCTCCAGTATTGATGGGGAAAATAAACTCAGTAGAGCCACGACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR CCA 90 bp GATAGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGGACAGCATGCCCATaGCCTGCTGGGTGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: DRKLLYSIYHPEGHPLSKWTACP*PAGWPE
Trigger: CTCTGGCCACCCAGCAGGCCATGGGCATGCTGTCCA...TTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR CAA 90 bp GAGGCTTATGGTCTCACTGTTGCATGTTGGGGCCAACAGTTGGCCTaGGAAATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGA +
Preference number: 2 (lower is better)
Translates to: EAYGLTVACWGQQLA*EICILTVEFHFLGG
Trigger: TCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGATTTCCAAGGCCAACTGTTGGCCCCAACATGCAACAGTGAGACCATAAGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
3UTR CAA 90 bp CCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGGGCCAACAGTaGGCCTTGGAAATCTGTATCCTGACTGTTGAATTCCATTTTCTA +
Preference number: 2 (lower is better)
Translates to: PREAYGLTVACWGQQ*ALEICILTVEFHFL
Trigger: TAGAAAATGGAATTCAACAGTCAGGATACAGATTTCCAAGGCCAACTGTTGGCCCCAACATGCAACAGTGAGACCATAAGCCTCCCGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
3UTR-3UTR TCA 90 bp TTCTTACAGTTCTGGAAGCTGGGAAGTCTCAAGGTGCCAACAGTTTCATTTCCTTTTTTAGCACACTGCTaGTGTCCGACAGGCCTGGGT +
Preference number: 2 (lower is better)
Translates to: FLQFWKLGSLKVPTVSFPFLAHC*CPTGLG
Trigger: ACCCAGGCCTGTCGGACATCAGCAGTGTGCTAAAAA...AGGAAATGAAACTGTTGGCACCTTGAGACTTCCCAGCTTCCAGAACTGTAAGAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR GCA 90 bp TGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACTTGGCTTTTGATGCCTaGCTTGGCTTCGAAGCAACC +
Preference number: 2 (lower is better)
Translates to: CFIAYITLKGIHCQNVAHLAFDA*LGFEAT
Trigger: GGTTGCTTCGAAGCCAAGGCAGGCATCAAAAGCCAA...GTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000459771.5
ENST00000480371.1
3UTR-3UTR GCA 90 bp TTCTTACAGTTCTGGAAGCTGGGAAGTCTCAAGGTGCCAACAGTTTCATTTCCTTTGGCTTTTGATGCCTaGCTTGGCTTCGAAGCAACC +
Preference number: 2 (lower is better)
Translates to: FLQFWKLGSLKVPTVSFPLAFDA*LGFEAT
Trigger: GGTTGCTTCGAAGCCAAGGCAGGCATCAAAAGCCAA...AGGAAATGAAACTGTTGGCACCTTGAGACTTCCCAGCTTCCAGAACTGTAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR-3UTR CCA 90 bp TCCCTATTAGCCTCCTATAAGAAAGGACTTCCTGAAGTTCACTGTCCAGATCTACTCACTGTTGCATGTTaGGGCCAACAGTTGGCCTTG +
Preference number: 2 (lower is better)
Translates to: SLLASYKKGLPEVHCPDLLTVAC*GQQLAL
Trigger: CAAGGCCAACTGTTGGCCCCAACATGCAACAGTGAG...TAGATCTGGACAGTGAACTTCAGGAAGTCCTTTCTTATAGGAGGCTAATAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
3UTR-3UTR CCA 90 bp TCCCTATTAGCCTCCTATAAGAAAGGACTTCCTGAAGTTCACTGTCCAGATCTACCCACGGGAGGCTTATaGTCTCACTGTTGCATGTTG +
Preference number: 2 (lower is better)
Translates to: SLLASYKKGLPEVHCPDLPTGGL*SHCCML
Trigger: CAACATGCAACAGTGAGACCATAAGCCTCCCGTGGG...TAGATCTGGACAGTGAACTTCAGGAAGTCCTTTCTTATAGGAGGCTAATAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
3UTR CAA 90 bp ATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTaGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGCTT +
Preference number: 2 (lower is better)
Translates to: ICILTVEFHFLGGGD*YSTLNDSAQECPRL
Trigger: AAGCCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
3UTR-3UTR TCA 90 bp GAAGTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAATTTTCTAGGCGGAGGTaGTTTGTACAGCACCCTAAA +
Preference number: 2 (lower is better)
Translates to: EVHCPDLTPHLCKELCVQFSRRR*FVQHPK
Trigger: TTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAA...TTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
3UTR-3UTR TCA 90 bp TCAGCCACAGTAGTGCTGATGGGTAAAAATTCTTGTTGGCAAGAAAAACCACTTTTTTCTAGGCGGAGGTaGTTTGTACAGCACCCTAAA +
Preference number: 2 (lower is better)
Translates to: SATVVLMGKNSCWQEKPLFSRRR*FVQHPK
Trigger: TTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAA...AAGTGGTTTTTCTTGCCAACAAGAATTTTTACCCATCAGCACTACTGTGGCTGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
3UTR-3UTR TCA 90 bp AAAAAGGTAAGATTAGATCCATTCCTCATGCCATCCACACAAATAAACTCCAAAACAAGGGAGAGAAATTaGCCTTGGAGAGGGGAGGGA +
Preference number: 2 (lower is better)
Translates to: KKVRLDPFLMPSTQINSKTRERN*PWRGEG
Trigger: TCCCTCCCCTCTCCAAGGTCAATTTCTCTCCCTTGT...TTTGGAGTTTATTTGTGTGGATGGCATGAGGAATGGATCTAATCTTACCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394129.6
3UTR-3UTR CCA 90 bp TCATGTTATTCTCAATCCCTATTAGCCTCCTATAAGAAAGGACTTCCTGAAGTTGTTGGGGCCAACAGTTaGCCTTGGAAATCTGTATCC +
Preference number: 2 (lower is better)
Translates to: SCYSQSLLASYKKGLPEVVGANS*PWKSVS
Trigger: GGATACAGATTTCCAAGGCCAACTGTTGGCCCCAAC...AACTTCAGGAAGTCCTTTCTTATAGGAGGCTAATAGGGATTGAGAATAACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
ENST00000558663.5
3UTR-3UTR CCA 90 bp GTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGGTAAAAATTCTTGTTaGCAAGAAAAACCACTTAGG +
Preference number: 2 (lower is better)
Translates to: VHCPDLTPHLCKELCVQAGKNSC*QEKPLR
Trigger: CCTAAGTGGTTTTTCTTGCCAACAAGAATTTTTACC...TGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
3UTR-3UTR TCA 90 bp GTTGGCAAGAAAAACCACTTAGGTGATAGAAAACTGCTTTATAGCATATATCACTGGAAATCTGTATCCTaGCTGTTGAATTCCATTTTC +
Preference number: 2 (lower is better)
Translates to: VGKKNHLGDRKLLYSIYHWKSVS*LLNSIF
Trigger: GAAAATGGAATTCAACAGTCAGGATACAGATTTCCA...GTGATATATGCTATAAAGCAGTTTTCTATCACCTAAGTGGTTTTTCTTGCCAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
3UTR-3UTR CAA 90 bp CACACTGCTGATGTCCGACAGGCCTGGGTCTGGGACCAGTGTGTACCAGCAAGCGGCTTCGAAGCAACCTaGGGGGCCGTGGACAGCATG +
Preference number: 3 (lower is better)
Translates to: HTADVRQAWVWDQCVPASGFEAT*GAVDSM
Trigger: CATGCTGTCCACGGCCCCCAAGGTTGCTTCGAAGCC...GCTTGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCGGACATCAGCAGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR GCA 72 bp GGCCCTGTGCTGCAATCTGCTGTCATAGCACCAGCCTaGAGCCTCATGGCCACAGTCTGTGGGACCAGGGGA +
Preference number: 3 (lower is better)
Translates to: GPVLQSAVIAPA*SLMATVCGTRG
Trigger: TCCCCTGGTCCCACAGACTGTGGCCATGAGGCTGCAGGCTGGTGCTATGACAGCAGATTGCAGCACAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR CCA 72 bp ACCTTGGGGGCCGTGGACAGCATGCCCATGGCCTGCTaGGTGGCCAGAGTCCTTTTGTCCTGCGGTCCATAT +
Preference number: 3 (lower is better)
Translates to: TLGAVDSMPMAC*VARVLLSCGPY
Trigger: ATATGGACCGCAGGACAAAAGGACTCTGGCCACCCAGCAGGCCATGGGCATGCTGTCCACGGCCCCCAAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR CCA 72 bp AGCTCCAGGTGGCATCCAGGTTTGTCCTGCCTGCAGTaGAGGCCACAGGAGGGATGCGAAGCAGCAGGGAGT +
Preference number: 3 (lower is better)
Translates to: SSRWHPGLSCLQ*RPQEGCEAAGS
Trigger: ACTCCCTGCTGCTTCGCATCCCTCCTGTGGCCTCCACTGCAGGCAGGACAAACCTGGATGCCACCTGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR CCA 72 bp TGGGGGCCGTGGACAGCATGCCCATGGCCTGCTGGGTaGCCAGAGTCCTTTTGTCCTGCGGTCCATATAAGA +
Preference number: 3 (lower is better)
Translates to: WGPWTACPWPAG*PESFCPAVHIR
Trigger: TCTTATATGGACCGCAGGACAAAAGGACTCTGGCCACCCAGCAGGCCATGGGCATGCTGTCCACGGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR CCA 72 bp GCTAGCCTTTCTTTTCACTCCCTTACACCTGCCTCCTaGGCCCCAGGCCAAGTCAGGTGTGTCGGCCTCCTG +
Preference number: 3 (lower is better)
Translates to: ASLSFHSLTPAS*APGQVRCVGLL
Trigger: CAGGAGGCCGACACACCTGACTTGGCCTGGGGCCCAGGAGGCAGGTGTAAGGGAGTGAAAAGAAAGGCTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR CCA 72 bp AGGCCTGGGTCTGGGACCAGTGTGTACCAGCAAGCATaGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAG +
Preference number: 3 (lower is better)
Translates to: RPGSGTSVYQQA*SVGSAVTLLRK
Trigger: CTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGCTTGCTGGTACACACTGGTCCCAGACCCAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR CAA 90 bp CGACAGGCCTGGGTCTGGGACCAGTGTGTACCAGCAAGCATGGTCTGTGGGGTCCACTGGATCTCCTCGTaGACATCGTGGAGGAAGGCA +
Preference number: 3 (lower is better)
Translates to: RQAWVWDQCVPASMVCGVHWISS*TSWRKA
Trigger: TGCCTTCCTCCACGATGTCAACGAGGAGATCCAGTG...GACCCCACAGACCATGCTTGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR CCA 72 bp GCACCCCTACCCCTGGGTGTTCCATCCACCTCGATCTaGCACTGGATCTCCTCGTTGACATCGTGGAGGAAG +
Preference number: 3 (lower is better)
Translates to: APLPLGVPSTSI*HWISSLTSWRK
Trigger: CTTCCTCCACGATGTCAACGAGGAGATCCAGTGCCAGATCGAGGTGGATGGAACACCCAGGGGTAGGGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR TCA 72 bp AGCAAGCATGGTCTGTGGGGTCAGCTGTCACGCTCCTaGGGAAGACAATGGTCCCTGCTTCTCTCCACCCTG +
Preference number: 3 (lower is better)
Translates to: SKHGLWGQLSRS*GRQWSLLLSTL
Trigger: CAGGGTGGAGAGAAGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR GCA 72 bp TCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATaGCGGGCTGACTCCTGCACAGGGCGCACTGAACTG +
Preference number: 3 (lower is better)
Translates to: STPMQGAVCTSR*RADSCTGRTEL
Trigger: CAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
3UTR GCA 72 bp TCCAGGGGGCTGAAGACTGCTGTGTACACGATAGTGTaGCAACTCAGGAAGCAGCTCCAGGTGGCATCCAGG +
Preference number: 3 (lower is better)
Translates to: SRGLKTAVYTIV*QLRKQLQVASR
Trigger: CCTGGATGCCACCTGGAGCTGCTTCCTGAGTTGGCACACTATCGTGTACACAGCAGTCTTCAGCCCCCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR CCA 72 bp CTACCCCTGGGTGTTCCATCCACCTCGATCTGGCACTaGATCTCCTCGTTGACATCGTGGAGGAAGGCACTC +
Preference number: 3 (lower is better)
Translates to: LPLGVPSTSIWH*ISSLTSWRKAL
Trigger: GAGTGCCTTCCTCCACGATGTCAACGAGGAGATCCAGTGCCAGATCGAGGTGGATGGAACACCCAGGGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR CAA 90 bp CCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGGTGGCCAGAGTCCTTTaGTCCTGCGGTCCATATAAG +
Preference number: 3 (lower is better)
Translates to: PMQGAVCTSRCRADSCTGVARVL*SCGPYK
Trigger: CTTATATGGACCGCAGGACAAAAGGACTCTGGCCAC...CCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR TCA 72 bp GGGAAGTCTCAAGGTGCCAACAGTTTCATTTCCTGGTaGGGGCTCTCTTCCGGGCCTGCAGACGGCTGTCTT +
Preference number: 3 (lower is better)
Translates to: GKSQGANSFISW*GLSSGPADGCL
Trigger: AAGACAGCCGTCTGCAGGCCCGGAAGAGAGCCCTCACCAGGAAATGAAACTGTTGGCACCTTGAGACTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR CAA 90 bp AGTAGTGACATCTTACACGTTTTTAGCACACTGCTGATGTCCGACAGGCCTGGGGGCTTCGAAGCAACCTaGGGGGCCGTGGACAGCATG +
Preference number: 3 (lower is better)
Translates to: SSDILHVFSTLLMSDRPGGFEAT*GAVDSM
Trigger: CATGCTGTCCACGGCCCCCAAGGTTGCTTCGAAGCC...CCCAGGCCTGTCGGACATCAGCAGTGTGCTAAAAACGTGTAAGATGTCACTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR-3UTR CAA 90 bp GTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGGGCCAAGGCCACTTTGGCTTTaGATGCCTGCCTTGGCTTCG +
Preference number: 3 (lower is better)
Translates to: VKMWPTGGLWSHCCMLGPRPLWL*MPALAS
Trigger: CGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCCT...TGGCCCCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000459771.5
ENST00000480371.1
3UTR-3UTR CAA 90 bp CCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCAGTGCAGAAGGCCACTTaGGCTTTTGATGCCTGCCTT +
Preference number: 3 (lower is better)
Translates to: PHLCKELCVQADAGLTPAVQKAT*AFDACL
Trigger: AAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCAC...TGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000459771.5
ENST00000480371.1
3UTR-3UTR CAA 90 bp TCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCTTCTCTCTCTCACTGTTGCATGTaGGGGCCAACAGTTGGCCTT +
Preference number: 3 (lower is better)
Translates to: SVGSAVTLLRKTMVPASLSHCCM*GPTVGL
Trigger: AAGGCCAACTGTTGGCCCCAACATGCAACAGTGAGA...GAGAGAAGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR CAA 90 bp TGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCTTCTTCTCACTGTTGCATGTaGGGGCCAACAGTTGGCCTT +
Preference number: 3 (lower is better)
Translates to: WSVGSAVTLLRKTMVPASSHCCM*GPTVGL
Trigger: AAGGCCAACTGTTGGCCCCAACATGCAACAGTGAGA...AGAAGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR GCA 72 bp CACACGACTATGGCCTCCTTCCAGGGGGCTGAAGACTaGTGTGTACACGATAGTGTGCCAACTCAGGAAGCA +
Preference number: 3 (lower is better)
Translates to: HTTMASFQGAED*CVHDSVPTQEA
Trigger: TGCTTCCTGAGTTGGCACACTATCGTGTACACAGCAGTCTTCAGCCCCCTGGAAGGAGGCCATAGTCGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR GCA 72 bp GTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTaGTTCTCTCCACCCTGTCGTGGCTCTACTGAGTTT +
Preference number: 3 (lower is better)
Translates to: VSCHAPEEDNGP*FSPPCRGSTEF
Trigger: AAACTCAGTAGAGCCACGACAGGGTGGAGAGAAGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR CCA 72 bp GGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTaGGGCCAACAGTTGGCCTTGGAAATCTGTATCCTG +
Preference number: 3 (lower is better)
Translates to: GPREAYGLTVAC*GQQLALEICIL
Trigger: CAGGATACAGATTTCCAAGGCCAACTGTTGGCCCCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
3UTR CCA 72 bp GCATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATaGTCTCACTGTTGCATGTTGGGGCCAACAGTTGGC +
Preference number: 3 (lower is better)
Translates to: ASTVKMWPTGGL*SHCCMLGPTVG
Trigger: GCCAACTGTTGGCCCCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
3UTR-3UTR CAA 90 bp CCCTCCTACTGGGCTCTTTCTCAAACCCCTTTTCAGGCTCCGAAGAACTCTGAGAGGCCACTTTGGCTTTaGATGCCTGCCTTGGCTTCG +
Preference number: 3 (lower is better)
Translates to: PSYWALSQTPFQAPKNSERPLWL*MPALAS
Trigger: CGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCCT...CTCAGAGTTCTTCGGAGCCTGAAAAGGGGTTTGAGAAAGAGCCCAGTAGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR-3UTR CAA 90 bp GGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGAGGCCACTTTGGCTTTaGATGCCTGCCTTGGCTTCG +
Preference number: 3 (lower is better)
Translates to: GGGDLYSTLNDSAQECPRRPLWL*MPALAS
Trigger: CGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCCT...CCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000459771.5
ENST00000480371.1
3UTR-3UTR CAA 90 bp TGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCTTCTTGTTGGGGCCAACAGTaGGCCTTGGAAATCTGTATC +
Preference number: 3 (lower is better)
Translates to: WSVGSAVTLLRKTMVPASCWGQQ*ALEICI
Trigger: GATACAGATTTCCAAGGCCAACTGTTGGCCCCAACA...AGAAGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR CAA 90 bp TGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTTGAAGCTTATGGTCTCACTGTaGCATGTTGGGGCCAACAGT +
Preference number: 3 (lower is better)
Translates to: CTSRCRADSCTGRTELLKLMVSL*HVGANS
Trigger: ACTGTTGGCCCCAACATGCAACAGTGAGACCATAAG...CTTCAACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
3UTR GCA 72 bp GGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTaGACAGGGCGCACTGAACTGTTGAAGAGAAGTTTT +
Preference number: 3 (lower is better)
Translates to: GAVCTSRCRADS*TGRTELLKRSF
Trigger: AAAACTTCTCTTCAACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
3UTR-3UTR CAA 90 bp CCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGCTTTTGATGCCTGCCTaGGCTTCGAAGCAACCTTGG +
Preference number: 3 (lower is better)
Translates to: PLSKCGPREAYGLTVACWLLMPA*ASKQPW
Trigger: CCAAGGTTGCTTCGAAGCCAAGGCAGGCATCAAAAG...CCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000459771.5
ENST00000480371.1
3UTR-3UTR CAA 90 bp ACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTCTTATGGTCTCACTGTaGCATGTTGGGGCCAACAGT +
Preference number: 3 (lower is better)
Translates to: TPHLCKELCVQADAGLTPLMVSL*HVGANS
Trigger: ACTGTTGGCCCCAACATGCAACAGTGAGACCATAAG...AGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
3UTR TCA 72 bp TTCCATCCACCTCGATCTGGCACTGGATCTCCTCGTTaGCATCGTGGAGGAAGGCACTCAAAGCTTCCTGTT +
Preference number: 3 (lower is better)
Translates to: FHPPRSGTGSPR*HRGGRHSKLPV
Trigger: AACAGGAAGCTTTGAGTGCCTTCCTCCACGATGTCAACGAGGAGATCCAGTGCCAGATCGAGGTGGATGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR GCA 72 bp CCTGAAGTTCACTGTCCAGATCTAACTCCACACCTATaGAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTG +
Preference number: 3 (lower is better)
Translates to: PEVHCPDLTPHL*KELCVQADAGL
Trigger: CAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAACTTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
3UTR CCA 72 bp ACCTCGATCTGGCACTGGATCTCCTCGTTGACATCGTaGAGGAAGGCACTCAAAGCTTCCTGTTCGACTTTG +
Preference number: 3 (lower is better)
Translates to: TSIWHWISSLTS*RKALKASCSTL
Trigger: CAAAGTCGAACAGGAAGCTTTGAGTGCCTTCCTCCACGATGTCAACGAGGAGATCCAGTGCCAGATCGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR CAA 90 bp GAGGAAGGCACTCAAAGCTTCCTGTTCGACTTTGCCATCCTCACACGACTATGGGTGGCCAGAGTCCTTTaGTCCTGCGGTCCATATAAG +
Preference number: 3 (lower is better)
Translates to: EEGTQSFLFDFAILTRLWVARVL*SCGPYK
Trigger: CTTATATGGACCGCAGGACAAAAGGACTCTGGCCAC...CCATAGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGCTTTGAGTGCCTTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR-3UTR CAA 90 bp CTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCTAGGCGGAGGTGATTaGTACAGCACCCTAAATGAC +
Preference number: 3 (lower is better)
Translates to: LTPHLCKELCVQADAGLTLGGGD*YSTLND
Trigger: GTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAG...AGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
3UTR-3UTR CAA 90 bp CCCTCCTACTGGGCTCTTTCTCAAACCCCTTTTCAGGCTCCGAAGAACTCTGAGGGCCAACAGTTGGCCTaGGAAATCTGTATCCTGACT +
Preference number: 3 (lower is better)
Translates to: PSYWALSQTPFQAPKNSEGQQLA*EICILT
Trigger: AGTCAGGATACAGATTTCCAAGGCCAACTGTTGGCC...CTCAGAGTTCTTCGGAGCCTGAAAAGGGGTTTGAGAAAGAGCCCAGTAGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR CAA 90 bp CCCTGTCGTGGCTCTACTGAGTTTATTTTCCCCATCAATACTGGAGGTGGTGCCCTAGGCGGAGGTGATTaGTACAGCACCCTAAATGAC +
Preference number: 3 (lower is better)
Translates to: PCRGSTEFIFPINTGGGALGGGD*YSTLND
Trigger: GTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAG...GGCACCACCTCCAGTATTGATGGGGAAAATAAACTCAGTAGAGCCACGACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR CAA 90 bp CCCTGTCGTGGCTCTACTGAGTTTATTTTCCCCATCAATACTGGAGGTGGTGCCGGCCAACAGTTGGCCTaGGAAATCTGTATCCTGACT +
Preference number: 3 (lower is better)
Translates to: PCRGSTEFIFPINTGGGAGQQLA*EICILT
Trigger: AGTCAGGATACAGATTTCCAAGGCCAACTGTTGGCC...GGCACCACCTCCAGTATTGATGGGGAAAATAAACTCAGTAGAGCCACGACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR TCA 72 bp TTCAGGCTCCGAAGAACTCTGAGGCAGGCTGCACTTTaGAAACACATGCTGACAGCAGCGTGTTCAGGTTTC +
Preference number: 3 (lower is better)
Translates to: FRLRRTLRQAAL*KHMLTAACSGF
Trigger: GAAACCTGAACACGCTGCTGTCAGCATGTGTTTTCAAAGTGCAGCCTGCCTCAGAGTTCTTCGGAGCCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR CAA 90 bp AGTAGTGACATCTTACACGTTTTTAGCACACTGCTGATGTCCGACAGGCCTGGGCTTATGGTCTCACTGTaGCATGTTGGGGCCAACAGT +
Preference number: 3 (lower is better)
Translates to: SSDILHVFSTLLMSDRPGLMVSL*HVGANS
Trigger: ACTGTTGGCCCCAACATGCAACAGTGAGACCATAAG...CCCAGGCCTGTCGGACATCAGCAGTGTGCTAAAAACGTGTAAGATGTCACTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR CAA 90 bp TGTCGTGGCTCTACTGAGTTTATTTTCCCCATCAATACTGGAGGTGGTGCCCTGGCTTCCTGTTCGACTTaGCCATCCTCACACGACTAT +
Preference number: 3 (lower is better)
Translates to: CRGSTEFIFPINTGGGALASCST*PSSHDY
Trigger: ATAGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGC...CAGGGCACCACCTCCAGTATTGATGGGGAAAATAAACTCAGTAGAGCCACGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR-3UTR CAA 90 bp GTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCATGTTGGGGCCAACAGTaGGCCTTGGAAATCTGTATC +
Preference number: 3 (lower is better)
Translates to: VHCPDLTPHLCKELCVQACWGQQ*ALEICI
Trigger: GATACAGATTTCCAAGGCCAACTGTTGGCCCCAACA...TGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
3UTR-3UTR CAA 90 bp GTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCACTTATGGTCTCACTGTaGCATGTTGGGGCCAACAGT +
Preference number: 3 (lower is better)
Translates to: VHCPDLTPHLCKELCVQALMVSL*HVGANS
Trigger: ACTGTTGGCCCCAACATGCAACAGTGAGACCATAAG...TGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
3UTR TCA 72 bp CGTGAATTGGGAGCATATGAACATTCACCCCTTAGCTaGCTCCACCCATGTCAACTAGATAGGACACACGGT +
Preference number: 3 (lower is better)
Translates to: RELGAYEHSPLS*LHPCQLDRTHG
Trigger: ACCGTGTGTCCTATCTAGTTGACATGGGTGGAGTCAGCTAAGGGGTGAATGTTCATATGCTCCCAATTCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR CCA 72 bp CTTTTGTCCTGCGGTCCATATAAGAGGGTCTGGATCTaGAGACACTGTAGAACACCAAGCAGCTATCATGAG +
Preference number: 3 (lower is better)
Translates to: LLSCGPYKRVWI*RHCRTPSSYHE
Trigger: CTCATGATAGCTGCTTGGTGTTCTACAGTGTCTCCAGATCCAGACCCTCTTATATGGACCGCAGGACAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR CCA 72 bp AGAGTCCTTTTGTCCTGCGGTCCATATAAGAGGGTCTaGATCTGGAGACACTGTAGAACACCAAGCAGCTAT +
Preference number: 3 (lower is better)
Translates to: RVLLSCGPYKRV*IWRHCRTPSSY
Trigger: ATAGCTGCTTGGTGTTCTACAGTGTCTCCAGATCCAGACCCTCTTATATGGACCGCAGGACAAAAGGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR-3UTR CAA 90 bp TCAGCCACAGTAGTGCTGATGGGTAAAAATTCTTGTTGGCAAGAAAAACCACTTGGCCAACAGTTGGCCTaGGAAATCTGTATCCTGACT +
Preference number: 3 (lower is better)
Translates to: SATVVLMGKNSCWQEKPLGQQLA*EICILT
Trigger: AGTCAGGATACAGATTTCCAAGGCCAACTGTTGGCC...AAGTGGTTTTTCTTGCCAACAAGAATTTTTACCCATCAGCACTACTGTGGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
3UTR-3UTR CAA 90 bp TCAGCCACAGTAGTGCTGATGGGTAAAAATTCTTGTTGGCAAGAAAAACCACTTTGTTGGGGCCAACAGTaGGCCTTGGAAATCTGTATC +
Preference number: 3 (lower is better)
Translates to: SATVVLMGKNSCWQEKPLCWGQQ*ALEICI
Trigger: GATACAGATTTCCAAGGCCAACTGTTGGCCCCAACA...AAGTGGTTTTTCTTGCCAACAAGAATTTTTACCCATCAGCACTACTGTGGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp CAGTGGAGGCCACAGGAGGGATGCGAAGCAGCAGGGAGTCTGCGGTCTTCCCCCTCACTCCCTTACACCTaGCTCCTGGGCCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: QWRPQEGCEAAGSLRSSPSLPYT*LLGPRP
Trigger: TGGCCTGGGGCCCAGGAGGCAGGTGTAAGGGAGTGA...GGGGGAAGACCGCAGACTCCCTGCTGCTTCGCATCCCTCCTGTGGCCTCCACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp CAGTGGAGGCCACAGGAGGGATGCGAAGCAGCAGGGAGTCTGCGGTCTTCCCCCCTGGAGGTGGTGCCCTaGACAAATGGCCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: QWRPQEGCEAAGSLRSSPLEVVP*TNGPRV
Trigger: CACCCTGGGGCCATTTGTGCAGGGCACCACCTCCAG...GGGGGAAGACCGCAGACTCCCTGCTGCTTCGCATCCCTCCTGTGGCCTCCACTG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp TGGGCCCCAGGCCAAGTCAGGTGTGTCGGCCTCCTGCCCCTCCTACTGGGCTCTGATGTGTGCCGAGTCTaGTGCCTCCACTTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: WAPGQVRCVGLLPLLLGSDVCRV*CLHLRG
Trigger: CCCTCTCAAGTGGAGGCAGCAGACTCGGCACACATC...AGAGCCCAGTAGGAGGGGCAGGAGGCCGACACACCTGACTTGGCCTGGGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp GCCTGCCTTGGCTTCGAAGCAACCTTGGGGGCCGTGGACAGCATGCCCATGGCCAGCATGCCCATGGCCTaGTGGGTGGCCAGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: ACLGFEATLGAVDSMPMASMPMA*WVARVL
Trigger: AAGGACTCTGGCCACCCAGCAGGCCATGGGCATGCT...GGCCATGGGCATGCTGTCCACGGCCCCCAAGGTTGCTTCGAAGCCAAGGCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR GCA 90 bp CCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGGTGGGGGCCTCAGTCTaGTGTTGTGCCGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: PMQGAVCTSRCRADSCTGVGASV*CCAGPG
Trigger: GCCCGGCCCGGCACAACAGCAGACTGAGGCCCCCAC...CCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp CAGGAATGTCCTAGGCTTTTTCAGGGTGGGGGCCTCAGTCTGCTGTTGTGCCGGGTGGGGGCCTCAGTCTaGTGTTGTGCCGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: QECPRLFQGGGLSLLLCRVGASV*CCAGPG
Trigger: GCCCGGCCCGGCACAACAGCAGACTGAGGCCCCCAC...CCGGCACAACAGCAGACTGAGGCCCCCACCCTGAAAAAGCCTAGGACATTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000459771.5
ENST00000480371.1
CDS-3UTR GCA 90 bp GTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTTGCCCCTGCGCCAGGTCTaGTCCTCCCAGGAGCCGGTA +
Preference number: 4 (lower is better)
Translates to: VCTSRCRADSCTGRTELLPLRQV*SSQEPV
Trigger: TACCGGCTCCTGGGAGGAGCAGACCTGGCGCAGGGG...CAACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp ATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCCCACTGTGGTTCCCCTaGGCCAGGTCTGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: MQGAVCTSRCRADSCTGRPLWFP*ARSAPP
Trigger: GGGAGGAGCAGACCTGGCGCAGGGGAACCACAGTGG...GCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp CAGTGGAGGCCACAGGAGGGATGCGAAGCAGCAGGGAGTCTGCGGTCTTCCCCCGGGTGTCCTGAGGGATaGTGGTGCAGAAGGCCACTT +
Preference number: 4 (lower is better)
Translates to: QWRPQEGCEAAGSLRSSPGCPEG*WCRRPL
Trigger: AAGTGGCCTTCTGCACCAGCATCCCTCAGGACACCC...GGGGGAAGACCGCAGACTCCCTGCTGCTTCGCATCCCTCCTGTGGCCTCCACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp AGCTTCCTGTTCGACTTTGCCATCCTCACACGACTATGGCCTCCTTCCAGGGGGGTGGGGGCCTCAGTCTaGTGTTGTGCCGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: SFLFDFAILTRLWPPSRGVGASV*CCAGPG
Trigger: GCCCGGCCCGGCACAACAGCAGACTGAGGCCCCCAC...CCCCCTGGAAGGAGGCCATAGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp CGACAGGCCTGGGTCTGGGACCAGTGTGTACCAGCAAGCATGGTCTGTGGGGTCTGCCGGGCTGACTCCTaGACAGGGCGCACTGAACTG +
Preference number: 4 (lower is better)
Translates to: RQAWVWDQCVPASMVCGVCRADS*TGRTEL
Trigger: CAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCA...GACCCCACAGACCATGCTTGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp TGTCCTAGGCTTTTTCAGGGTGGGGGCCTCAGTCTGCTGTTGTGCCGGGCCGGGGCTTCGAAGCAACCTTaGGGGCCGTGGACAGCATGC +
Preference number: 4 (lower is better)
Translates to: CPRLFQGGGLSLLLCRAGASKQP*GPWTAC
Trigger: GCATGCTGTCCACGGCCCCCAAGGTTGCTTCGAAGC...CCCGGCCCGGCACAACAGCAGACTGAGGCCCCCACCCTGAAAAAGCCTAGGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR CCA 90 bp TGGGCCCCAGGCCAAGTCAGGTGTGTCGGCCTCCTGCCCCTCCTACTGGGCTCTTCCTGCCCCTCCTACTaGGCTCTTTCTCAAACCCCT +
Preference number: 4 (lower is better)
Translates to: WAPGQVRCVGLLPLLLGSSCPSY*ALSQTP
Trigger: AGGGGTTTGAGAAAGAGCCCAGTAGGAGGGGCAGGA...AGAGCCCAGTAGGAGGGGCAGGAGGCCGACACACCTGACTTGGCCTGGGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp CCAGGCCAAGTCAGGTGTGTCGGCCTCCTGCCCCTCCTACTGGGCTCTTTCTCACTTACACCTGCCTCCTaGGCCCCAGGCCAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: PGQVRCVGLLPLLLGSFSLTPAS*APGQVR
Trigger: CCTGACTTGGCCTGGGGCCCAGGAGGCAGGTGTAAG...TGAGAAAGAGCCCAGTAGGAGGGGCAGGAGGCCGACACACCTGACTTGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp CACACTGCTGATGTCCGACAGGCCTGGGTCTGGGACCAGTGTGTACCAGCAAGCCATGGCCACAGTCTGTaGGACCAGGGGAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: HTADVRQAWVWDQCVPASHGHSL*DQGREG
Trigger: CCCCTCCCTCCCCTGGTCCCACAGACTGTGGCCATG...GCTTGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCGGACATCAGCAGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp CTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTAAGCAGATGCCGGGCTaGCTCCTGCACAGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: LCVQADAGLTPAQGALNCKQMPG*LLHRAH
Trigger: GTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTT...ACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp GCTTCCTGTTCGACTTTGCCATCCTCACACGACTATGGCCTCCTTCCAGGGGGCCCACTGTGGTTCCCCTaGGCCAGGTCTGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: ASCSTLPSSHDYGLLPGGPLWFP*ARSAPP
Trigger: GGGAGGAGCAGACCTGGCGCAGGGGAACCACAGTGG...GCCCCCTGGAAGGAGGCCATAGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp ACCTGCACCCCTACCCCTGGGTGTTCCATCCACCTCGATCTGGCACTGGATCTCTCACTCCCTTACACCTaGCTCCTGGGCCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: TCTPTPGCSIHLDLALDLSLPYT*LLGPRP
Trigger: TGGCCTGGGGCCCAGGAGGCAGGTGTAAGGGAGTGA...GAGATCCAGTGCCAGATCGAGGTGGATGGAACACCCAGGGGTAGGGGTGCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp CCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGTTGCGGGCCCCACTGTaGTTCCCCTGCGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: PMQGAVCTSRCRADSCTGLRAPL*FPCARS
Trigger: AGACCTGGCGCAGGGGAACCACAGTGGGGCCCGCAA...CCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CCA 90 bp GCCTGCCTTGGCTTCGAAGCAACCTTGGGGGCCGTGGACAGCATGCCCATGGCCTCCTGCCCCTCCTACTaGGCTCTTTCTCAAACCCCT +
Preference number: 4 (lower is better)
Translates to: ACLGFEATLGAVDSMPMASCPSY*ALSQTP
Trigger: AGGGGTTTGAGAAAGAGCCCAGTAGGAGGGGCAGGA...GGCCATGGGCATGCTGTCCACGGCCCCCAAGGTTGCTTCGAAGCCAAGGCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR CCA 90 bp GTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTTGCATGGCCACAGTCTGTaGGACCAGGGGAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: VCTSRCRADSCTGRTELLHGHSL*DQGREG
Trigger: CCCCTCCCTCCCCTGGTCCCACAGACTGTGGCCATG...CAACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp GTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTTGGTGCTCGTGTCTCCCTaGAGCGACAGCAGCATGGGC +
Preference number: 4 (lower is better)
Translates to: VCTSRCRADSCTGRTELLVLVSP*SDSSMG
Trigger: GCCCATGCTGCTGTCGCTTCAGGGAGACACGAGCAC...CAACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR TCA 90 bp TGTCCTAGGCTTTTTCAGGGTGGGGGCCTCAGTCTGCTGTTGTGCCGGGCCGGGAGTTTCATTTCCTGGTaGGGGCTCTCTTCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: CPRLFQGGGLSLLLCRAGSFISW*GLSSGP
Trigger: AGGCCCGGAAGAGAGCCCTCACCAGGAAATGAAACT...CCCGGCCCGGCACAACAGCAGACTGAGGCCCCCACCCTGAAAAAGCCTAGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR GCA 90 bp TGTCCTAGGCTTTTTCAGGGTGGGGGCCTCAGTCTGCTGTTGTGCCGGGCCGGGCCTGAGGGATGCTGGTaGAGAAGGCCACTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: CPRLFQGGGLSLLLCRAGPEGCW*RRPLWL
Trigger: AAGCCAAAGTGGCCTTCTGCACCAGCATCCCTCAGG...CCCGGCCCGGCACAACAGCAGACTGAGGCCCCCACCCTGAAAAAGCCTAGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000459771.5
ENST00000480371.1
CDS-3UTR GCA 90 bp CTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTTGCCGGGCTGACTCCTaGACAGGGCGCACTGAACTG +
Preference number: 4 (lower is better)
Translates to: LCVQADAGLTPAQGALNCCRADS*TGRTEL
Trigger: CAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCA...ACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp TGTCCTAGGCTTTTTCAGGGTGGGGGCCTCAGTCTGCTGTTGTGCCGGGCCGGGGTGTGTACAAGCAGATaGCGGGCTGACTCCTGCACA +
Preference number: 4 (lower is better)
Translates to: CPRLFQGGGLSLLLCRAGVCTSR*RADSCT
Trigger: TGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACAC...CCCGGCCCGGCACAACAGCAGACTGAGGCCCCCACCCTGAAAAAGCCTAGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000459771.5
ENST00000480371.1
CDS-3UTR GCA 90 bp GAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACATCACTGCCCACACCTaGACCCCTACCCCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: ELCVQADAGLTPAQGALNITAHT*TPTPGC
Trigger: ACACCCAGGGGTAGGGGTGCAGGTGTGGGCAGTGAT...GTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp CCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCTGGAGGTGGTGCCCTaGACAAATGGCCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: PMQGAVCTSRCRADSCTGLEVVP*TNGPRV
Trigger: CACCCTGGGGCCATTTGTGCAGGGCACCACCTCCAG...CCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp GCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCTTGGACAGCATGCCCATaGCCTGCTGGGTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: AWSVGSAVTLLRKTMVPAWTACP*PAGWPE
Trigger: CTCTGGCCACCCAGCAGGCCATGGGCATGCTGTCCA...AGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp GAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTTGTCCTGCCTGCAGTaGAGGCCACAGGAGGGATGC +
Preference number: 4 (lower is better)
Translates to: ELCVQADAGLTPAQGALNLSCLQ*RPQEGC
Trigger: GCATCCCTCCTGTGGCCTCCACTGCAGGCAGGACAA...GTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp TGGGCCCCAGGCCAAGTCAGGTGTGTCGGCCTCCTGCCCCTCCTACTGGGCTCTTTGTTTTGCTTGCAGTaGCAGTCCTTTCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: WAPGQVRCVGLLPLLLGSLFCLQ*QSFQLE
Trigger: CTCCAGCTGAAAGGACTGTCACTGCAAGCAAAACAA...AGAGCCCAGTAGGAGGGGCAGGAGGCCGACACACCTGACTTGGCCTGGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp CAGTGGAGGCCACAGGAGGGATGCGAAGCAGCAGGGAGTCTGCGGTCTTCCCCCACCAAGCAGCTATCATaGGGCTATGGAAGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: QWRPQEGCEAAGSLRSSPTKQLS*GYGSVA
Trigger: AGCGACACTTCCATAGCCTCATGATAGCTGCTTGGT...GGGGGAAGACCGCAGACTCCCTGCTGCTTCGCATCCCTCCTGTGGCCTCCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR TCA 90 bp GTACCAGCAAGCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATAAGCAGATGCCGGGCTaGCTCCTGCACAGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: VPASMVCGVSCHAPEEDNKQMPG*LLHRAH
Trigger: GTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTT...ATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGCTTGCTGGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp CGACAGGCCTGGGTCTGGGACCAGTGTGTACCAGCAAGCATGGTCTGTGGGGTCACTGGATCTCCTCGTTaGCATCGTGGAGGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: RQAWVWDQCVPASMVCGVTGSPR*HRGGRH
Trigger: GTGCCTTCCTCCACGATGTCAACGAGGAGATCCAGT...GACCCCACAGACCATGCTTGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp GAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACGATGTGTGCCGAGTCTaGTGCCTCCACTTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: ELCVQADAGLTPAQGALNDVCRV*CLHLRG
Trigger: CCCTCTCAAGTGGAGGCAGCAGACTCGGCACACATC...GTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp GGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGCCCCTGCGCCAGGTCTaGTCCTCCCAGGAGCCGGTA +
Preference number: 4 (lower is better)
Translates to: GGGDLYSTLNDSAQECPRPLRQV*SSQEPV
Trigger: TACCGGCTCCTGGGAGGAGCAGACCTGGCGCAGGGG...CCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp AGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTCCCCTGCGCCAGGTCTaGTCCTCCCAGGAGCCGGTA +
Preference number: 4 (lower is better)
Translates to: SIYHPEGHPLSKCGPREAPLRQV*SSQEPV
Trigger: TACCGGCTCCTGGGAGGAGCAGACCTGGCGCAGGGG...AGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp CAGGAATGTCCTAGGCTTTTTCAGGGTGGGGGCCTCAGTCTGCTGTTGTGCCGGAGCATGCCCATGGCCTaGTGGGTGGCCAGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: QECPRLFQGGGLSLLLCRSMPMA*WVARVL
Trigger: AAGGACTCTGGCCACCCAGCAGGCCATGGGCATGCT...CCGGCACAACAGCAGACTGAGGCCCCCACCCTGAAAAAGCCTAGGACATTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR GCA 90 bp GCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCTAGCATGCCCATGGCCTaGTGGGTGGCCAGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: AWSVGSAVTLLRKTMVPASMPMA*WVARVL
Trigger: AAGGACTCTGGCCACCCAGCAGGCCATGGGCATGCT...AGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp GTACCAGCAAGCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATCTCAGTCTGCTGTTGTaGCGGGCCGGGCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: VPASMVCGVSCHAPEEDNLSLLL*RAGPSP
Trigger: TGGGGAAGGCCCGGCCCGGCACAACAGCAGACTGAG...ATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGCTTGCTGGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp CGACAGGCCTGGGTCTGGGACCAGTGTGTACCAGCAAGCATGGTCTGTGGGGTCCCCTGTGCTGCAATCTaGTGTCATAGCACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: RQAWVWDQCVPASMVCGVPCAAI*CHSTSL
Trigger: CAGGCTGGTGCTATGACAGCAGATTGCAGCACAGGG...GACCCCACAGACCATGCTTGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp TGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCTTCTCTGGAGGTGGTGCCCTaGACAAATGGCCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: WSVGSAVTLLRKTMVPASLEVVP*TNGPRV
Trigger: CACCCTGGGGCCATTTGTGCAGGGCACCACCTCCAG...AGAAGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp GCAAGCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCGAAGCGACAGCAGCATaGGCGACGATGTGTGCCGAG +
Preference number: 4 (lower is better)
Translates to: ASMVCGVSCHAPEEDNGPEATAA*ATMCAE
Trigger: CTCGGCACACATCGTCGCCCATGCTGCTGTCGCTTC...GGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp GTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGGGCCATTGCGGGCCCCACTGTaGTTCCCCTGCGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: VKMWPTGGLWSHCCMLGPLRAPL*FPCARS
Trigger: AGACCTGGCGCAGGGGAACCACAGTGGGGCCCGCAA...TGGCCCCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CCA 90 bp CCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACTTACACCTGCCTCCTaGGCCCCAGGCCAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: PHLCKELCVQADAGLTPALTPAS*APGQVR
Trigger: CCTGACTTGGCCTGGGGCCCAGGAGGCAGGTGTAAG...TGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp AGCACACTGCTGATGTCCGACAGGCCTGGGTCTGGGACCAGTGTGTACCAGCAACTGCACCCCTACCCCTaGGTGTTCCATCCACCTCGA +
Preference number: 4 (lower is better)
Translates to: STLLMSDRPGSGTSVYQQLHPYP*VFHPPR
Trigger: TCGAGGTGGATGGAACACCCAGGGGTAGGGGTGCAG...TTGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCGGACATCAGCAGTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp GTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTTGCGACAGGCCTGGGTCTaGGACCAGTGTGTACCAGCA +
Preference number: 4 (lower is better)
Translates to: VCTSRCRADSCTGRTELLRQAWV*DQCVPA
Trigger: TGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCG...CAACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp AGCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCCGACAGGCCTGGGTCTaGGACCAGTGTGTACCAGCA +
Preference number: 4 (lower is better)
Translates to: SMVCGVSCHAPEEDNGPCRQAWV*DQCVPA
Trigger: TGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCG...GCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp CTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTGCTTCGAAGCAACCTTaGGGGCCCTGGGCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: LCVQADAGLTPAQGALNCASKQP*GPWARK
Trigger: CTTCCTTGCCCAGGGCCCCCAAGGTTGCTTCGAAGC...ACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480371.1
3UTR CAA 72 bp TGGTGCAGAAGGCCACTTTGGCTTTTGATGCCTGCCTaGGCTTCGAAGCAACCTTGGGGGCCCTGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: WCRRPLWLLMPA*ASKQPWGPWAR
Trigger: CCTTGCCCAGGGCCCCCAAGGTTGCTTCGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480371.1
CDS-3UTR TCA 90 bp AGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGCTTTTTCAGGGTGGGGGCGTGCTCGTGTCTCCCTaGAGCGACAGCAGCATGGGC +
Preference number: 4 (lower is better)
Translates to: STLNDSAQECPRLFQGGGVLVSP*SDSSMG
Trigger: GCCCATGCTGCTGTCGCTTCAGGGAGACACGAGCAC...GCCCCCACCCTGAAAAAGCCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR TCA 90 bp CACACTGCTGATGTCCGACAGGCCTGGGTCTGGGACCAGTGTGTACCAGCAAGCCTGCCACCTCGGGACTaGAATCGCCAAATGCTTCCA +
Preference number: 4 (lower is better)
Translates to: HTADVRQAWVWDQCVPASLPPRD*NRQMLP
Trigger: TGGAAGCATTTGGCGATTTCAGTCCCGAGGTGGCAG...GCTTGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCGGACATCAGCAGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp AGCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCCAGCTGTCACGCTCCTaGGGAAGACAATGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SMVCGVSCHAPEEDNGPCQLSRS*GRQWSL
Trigger: CAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTG...GCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp ATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCGAGCCGGTATGTCTCTaGCACCTCGGGACTGAAATC +
Preference number: 4 (lower is better)
Translates to: MQGAVCTSRCRADSCTGREPVCL*HLGTEI
Trigger: GATTTCAGTCCCGAGGTGGCAGAGACATACCGGCTC...GCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp CTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCTCAGTCTGCTGTTGTaGCGGGCCGGGCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LTPHLCKELCVQADAGLTLSLLL*RAGPSP
Trigger: TGGGGAAGGCCCGGCCCGGCACAACAGCAGACTGAG...AGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp ATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTGGACAGCATGCCCATaGCCTGCTGGGTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: ITLKGIHCQNVAHGRLMVWTACP*PAGWPE
Trigger: CTCTGGCCACCCAGCAGGCCATGGGCATGCTGTCCA...GACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp AGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCCAACCTTGGGGGCCGTaGACAGCATGCCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: RASTVKMWPTGGLWSHCCQPWGP*TACPWP
Trigger: AGGCCATGGGCATGCTGTCCACGGCCCCCAAGGTTG...GCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp GTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTTGATCCTCACACGACTATaGCCTCCTTCCAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VCTSRCRADSCTGRTELLILTRL*PPSRGL
Trigger: CAGCCCCCTGGAAGGAGGCCATAGTCGTGTGAGGAT...CAACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp AGCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCATCCTCACACGACTATaGCCTCCTTCCAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SMVCGVSCHAPEEDNGPCILTRL*PPSRGL
Trigger: CAGCCCCCTGGAAGGAGGCCATAGTCGTGTGAGGAT...GCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp ACCTGCACCCCTACCCCTGGGTGTTCCATCCACCTCGATCTGGCACTGGATCTCCCATCCACCTCGATCTaGCACTGGATCTCCTCGTTG +
Preference number: 4 (lower is better)
Translates to: TCTPTPGCSIHLDLALDLPSTSI*HWISSL
Trigger: CAACGAGGAGATCCAGTGCCAGATCGAGGTGGATGG...GAGATCCAGTGCCAGATCGAGGTGGATGGAACACCCAGGGGTAGGGGTGCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp TCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCTTCTCTCCAGCCTGCAGCCTCATaGCCACAGTCTGTGGGACCA +
Preference number: 4 (lower is better)
Translates to: SVGSAVTLLRKTMVPASLQPAAS*PQSVGP
Trigger: TGGTCCCACAGACTGTGGCCATGAGGCTGCAGGCTG...GAGAGAAGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp GCAAGCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCGATGTCCGACAGGCCTaGGTCTGGGACCAGTGTGTA +
Preference number: 4 (lower is better)
Translates to: ASMVCGVSCHAPEEDNGPDVRQA*VWDQCV
Trigger: TACACACTGGTCCCAGACCCAGGCCTGTCGGACATC...GGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp AGCTTCCTGTTCGACTTTGCCATCCTCACACGACTATGGCCTCCTTCCAGGGGGTCTGCTGCCTCCACTTaGGAGGGGCTTCTACTCAGG +
Preference number: 4 (lower is better)
Translates to: SFLFDFAILTRLWPPSRGSAAST*EGLLLR
Trigger: CCTGAGTAGAAGCCCCTCTCAAGTGGAGGCAGCAGA...CCCCCTGGAAGGAGGCCATAGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp GAGGAAGGCACTCAAAGCTTCCTGTTCGACTTTGCCATCCTCACACGACTATGGAAGCAGATGCCGGGCTaGCTCCTGCACAGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: EEGTQSFLFDFAILTRLWKQMPG*LLHRAH
Trigger: GTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTT...CCATAGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGCTTTGAGTGCCTTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp GCACCCCTACCCCTGGGTGTTCCATCCACCTCGATCTGGCACTGGATCTCCTCGAGGCAGGCTGCACTTTaGAAACACATGCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: APLPLGVPSTSIWHWISSRQAAL*KHMLTA
Trigger: TGCTGTCAGCATGTGTTTTCAAAGTGCAGCCTGCCT...CGAGGAGATCCAGTGCCAGATCGAGGTGGATGGAACACCCAGGGGTAGGGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp CGACAGGCCTGGGTCTGGGACCAGTGTGTACCAGCAAGCATGGTCTGTGGGGTCAAACCATCCTCTTCTTaGCAGCCGTGGGTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: RQAWVWDQCVPASMVCGVKPSSS*QPWVQL
Trigger: AAGCTGAACCCACGGCTGGCAAGAAGAGGATGGTTT...GACCCCACAGACCATGCTTGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp AGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCAGCATGCCCATGGCCTaGTGGGTGGCCAGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: RASTVKMWPTGGLWSHCCSMPMA*WVARVL
Trigger: AAGGACTCTGGCCACCCAGCAGGCCATGGGCATGCT...GCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp TCGTTGACATCGTGGAGGAAGGCACTCAAAGCTTCCTGTTCGACTTTGCCATCCCTCAGTCTGCTGTTGTaGCGGGCCGGGCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SLTSWRKALKASCSTLPSLSLLL*RAGPSP
Trigger: TGGGGAAGGCCCGGCCCGGCACAACAGCAGACTGAG...GGATGGCAAAGTCGAACAGGAAGCTTTGAGTGCCTTCCTCCACGATGTCAACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp TCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGAGTGGGGGCCTCAGTCTaGTGTTGTGCCGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: SLSRSNSTPMQGAVCTSRVGASV*CCAGPG
Trigger: GCCCGGCCCGGCACAACAGCAGACTGAGGCCCCCAC...TCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp CCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGTGCCGGGCTGACTCCTaGACAGGGCGCACTGAACTG +
Preference number: 4 (lower is better)
Translates to: PLSKCGPREAYGLTVACWCRADS*TGRTEL
Trigger: CAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCA...CCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp CAGGAATGTCCTAGGCTTTTTCAGGGTGGGGGCCTCAGTCTGCTGTTGTGCCGGGTGTGTACAAGCAGATaGCGGGCTGACTCCTGCACA +
Preference number: 4 (lower is better)
Translates to: QECPRLFQGGGLSLLLCRVCTSR*RADSCT
Trigger: TGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACAC...CCGGCACAACAGCAGACTGAGGCCCCCACCCTGAAAAAGCCTAGGACATTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000459771.5
ENST00000480371.1
CDS-3UTR GCA 90 bp GAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACCAGGGGGCTGAAGACTaGTGTGTACACGATAGTGTG +
Preference number: 4 (lower is better)
Translates to: ELCVQADAGLTPAQGALNQGAED*CVHDSV
Trigger: CACACTATCGTGTACACAGCAGTCTTCAGCCCCCTG...GTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp AGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATCACTGCCCACACCTaGACCCCTACCCCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: RASTVKMWPTGGLWSHCCITAHT*TPTPGC
Trigger: ACACCCAGGGGTAGGGGTGCAGGTGTGGGCAGTGAT...GCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp CAGGAATGTCCTAGGCTTTTTCAGGGTGGGGGCCTCAGTCTGCTGTTGTGCCGGCCCTGTGCTGCAATCTaGTGTCATAGCACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: QECPRLFQGGGLSLLLCRPCAAI*CHSTSL
Trigger: CAGGCTGGTGCTATGACAGCAGATTGCAGCACAGGG...CCGGCACAACAGCAGACTGAGGCCCCCACCCTGAAAAAGCCTAGGACATTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR GCA 90 bp GCCTGGGTCTGGGACCAGTGTGTACCAGCAAGCATGGTCTGTGGGGTCAGCTGTCCAGTTTACCCAGTCTaGTGGAGAGGCTCACCGTTT +
Preference number: 4 (lower is better)
Translates to: AWVWDQCVPASMVCGVSCPVYPV*WRGSPF
Trigger: AAACGGTGAGCCTCTCCAGCAGACTGGGTAAACTGG...ACAGCTGACCCCACAGACCATGCTTGCTGGTACACACTGGTCCCAGACCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394132.7
CDS-3UTR CCA 90 bp TGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTTGAAGATGCCCATGGCCTGCTaGGTGGCCAGAGTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: CTSRCRADSCTGRTELLKMPMAC*VARVLL
Trigger: CAAAAGGACTCTGGCCACCCAGCAGGCCATGGGCAT...CTTCAACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp CGTGGAGGAAGGCACTCAAAGCTTCCTGTTCGACTTTGCCATCCTCACACGACTCAACCTTGGGGGCCGTaGACAGCATGCCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: RGGRHSKLPVRLCHPHTTQPWGP*TACPWP
Trigger: AGGCCATGGGCATGCTGTCCACGGCCCCCAAGGTTG...AGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGCTTTGAGTGCCTTCCTCCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp TCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGGGCCAACAACCTTGGGGGCCGTaGACAGCATGCCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: SKCGPREAYGLTVACWGQQPWGP*TACPWP
Trigger: AGGCCATGGGCATGCTGTCCACGGCCCCCAAGGTTG...TTGGCCCCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp GAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACCTCACTGTTGCATGTTaGGGCCAACAGTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: ELCVQADAGLTPAQGALNLTVAC*GQQLAL
Trigger: CAAGGCCAACTGTTGGCCCCAACATGCAACAGTGAG...GTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CCA 90 bp GTACCAGCAAGCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATCTGCACCCCTACCCCTaGGTGTTCCATCCACCTCGA +
Preference number: 4 (lower is better)
Translates to: VPASMVCGVSCHAPEEDNLHPYP*VFHPPR
Trigger: TCGAGGTGGATGGAACACCCAGGGGTAGGGGTGCAG...ATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGCTTGCTGGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp CAGGGGGCTGAAGACTGCTGTGTACACGATAGTGTGCCAACTCAGGAAGCAGCTCAGCCTGCAGCCTCATaGCCACAGTCTGTGGGACCA +
Preference number: 4 (lower is better)
Translates to: QGAEDCCVHDSVPTQEAAQPAAS*PQSVGP
Trigger: TGGTCCCACAGACTGTGGCCATGAGGCTGCAGGCTG...AGCTGCTTCCTGAGTTGGCACACTATCGTGTACACAGCAGTCTTCAGCCCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp GCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCTGGTGCCCTGCACAAATaGCCCCAGGGTGGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: AWSVGSAVTLLRKTMVPAGALHK*PQGGFD
Trigger: ATCAAAACCACCCTGGGGCCATTTGTGCAGGGCACC...AGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp GTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGGGCCACGACAGGCCTGGGTCTaGGACCAGTGTGTACCAGCA +
Preference number: 4 (lower is better)
Translates to: VKMWPTGGLWSHCCMLGPRQAWV*DQCVPA
Trigger: TGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCG...TGGCCCCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR CAA 72 bp AGCATGCCCATGGCCTGCTGGGTGGCCAGAGTCCTTTaGTCCTGCGGTCCATATAAGAGGGTCTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: SMPMACWVARVL*SCGPYKRVWIW
Trigger: CCAGATCCAGACCCTCTTATATGGACCGCAGGACAAAAGGACTCTGGCCACCCAGCAGGCCATGGGCATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR CAA 72 bp TGGTGCAGAAGGCCACTTTGGCTTTTGATGCCTGCCTaGGCTTCGAAGCAACCTTGGGGGCCGTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: WCRRPLWLLMPA*ASKQPWGPWTA
Trigger: TGCTGTCCACGGCCCCCAAGGTTGCTTCGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
3UTR CAA 72 bp CCTGAGGGATGCTGGTGCAGAAGGCCACTTTGGCTTTaGATGCCTGCCTTGGCTTCGAAGCAACCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: PEGCWCRRPLWL*MPALASKQPWG
Trigger: CCCCCAAGGTTGCTTCGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCACCAGCATCCCTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000459771.5
ENST00000480371.1
CDS-3UTR TCA 90 bp ATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCCTGCACAGGGCGCACTaGACTGTTGAAGAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: MQGAVCTSRCRADSCTGRLHRAH*TVEEKF
Trigger: AAACTTCTCTTCAACAGTTCAGTGCGCCCTGTGCAG...GCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp TCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCTTCTCTCGGCTCCGAAGAACTCTaGGGCAGGCTGCACTTTGAA +
Preference number: 4 (lower is better)
Translates to: SVGSAVTLLRKTMVPASLGSEEL*GRLHFE
Trigger: TTCAAAGTGCAGCCTGCCTCAGAGTTCTTCGGAGCC...GAGAGAAGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp CTAGGCTTTTTCAGGGTGGGGGCCTCAGTCTGCTGTTGTGCCGGGCCGGGCCTTCTGTCGTGGCTCTACTaGGTTTATTTTCCCCATCAA +
Preference number: 4 (lower is better)
Translates to: LGFFRVGASVCCCAGPGLLSWLY*VYFPHQ
Trigger: TTGATGGGGAAAATAAACTCAGTAGAGCCACGACAG...AAGGCCCGGCCCGGCACAACAGCAGACTGAGGCCCCCACCCTGAAAAAGCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR TCA 90 bp TGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCTTCTGTTGTCTTGGCAGCGTaGTTTGCCCTCTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: WSVGSAVTLLRKTMVPASVVLAA*FALWFL
Trigger: CAGGAACCAGAGGGCAAATCACGCTGCCAAGACAAC...AGAAGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp AGCACACTGCTGATGTCCGACAGGCCTGGGTCTGGGACCAGTGTGTACCAGCAAAGGCAGAGGTTGCAGTaGGCCAAGATCACACCACTA +
Preference number: 4 (lower is better)
Translates to: STLLMSDRPGSGTSVYQQRQRLQ*AKITPL
Trigger: TAGTGGTGTGATCTTGGCTCACTGCAACCTCTGCCT...TTGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCGGACATCAGCAGTGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp CGACAGGCCTGGGTCTGGGACCAGTGTGTACCAGCAAGCATGGTCTGTGGGGTCGGGAGAGTAAAGCTCTaGCCATGGTATGGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: RQAWVWDQCVPASMVCGVGRVKL*PWYGKA
Trigger: AGCTTTTCCATACCATGGGCAGAGCTTTACTCTCCC...GACCCCACAGACCATGCTTGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp TGTCCTAGGCTTTTTCAGGGTGGGGGCCTCAGTCTGCTGTTGTGCCGGGCCGGGCAGGATGATAAGATGTaGCTGGAGGAAGTGGTTGAT +
Preference number: 4 (lower is better)
Translates to: CPRLFQGGGLSLLLCRAGQDDKM*LEEVVD
Trigger: ATCAACCACTTCCTCCAGGCACATCTTATCATCCTG...CCCGGCCCGGCACAACAGCAGACTGAGGCCCCCACCCTGAAAAAGCCTAGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR GCA 90 bp GGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGGTGTGCCGAGTCTGCTaGCTCCACTTGAGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: GGGDLYSTLNDSAQECPRVCRVC*LHLRGA
Trigger: AGCCCCTCTCAAGTGGAGGCAGCAGACTCGGCACAC...CCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp CGTGGAGGAAGGCACTCAAAGCTTCCTGTTCGACTTTGCCATCCTCACACGACTATGGGCGACGATGTGTaGCGAGTCTGCTGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: RGGRHSKLPVRLCHPHTTMGDDV*RVCCLH
Trigger: GTGGAGGCAGCAGACTCGGCACACATCGTCGCCCAT...AGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGCTTTGAGTGCCTTCCTCCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp TGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTTGAAGGAGCCGGTATGTCTCTaGCACCTCGGGACTGAAATC +
Preference number: 4 (lower is better)
Translates to: CTSRCRADSCTGRTELLKEPVCL*HLGTEI
Trigger: GATTTCAGTCCCGAGGTGGCAGAGACATACCGGCTC...CTTCAACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp TCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCTTCTCTCGAGCCGGTATGTCTCTaGCACCTCGGGACTGAAATC +
Preference number: 4 (lower is better)
Translates to: SVGSAVTLLRKTMVPASLEPVCL*HLGTEI
Trigger: GATTTCAGTCCCGAGGTGGCAGAGACATACCGGCTC...GAGAGAAGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp TCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGACCCCTGCGCCAGGTCTaGTCCTCCCAGGAGCCGGTA +
Preference number: 4 (lower is better)
Translates to: SLSRSNSTPMQGAVCTSRPLRQV*SSQEPV
Trigger: TACCGGCTCCTGGGAGGAGCAGACCTGGCGCAGGGG...TCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp GTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCACCCCTGCGCCAGGTCTaGTCCTCCCAGGAGCCGGTA +
Preference number: 4 (lower is better)
Translates to: VHCPDLTPHLCKELCVQAPLRQV*SSQEPV
Trigger: TACCGGCTCCTGGGAGGAGCAGACCTGGCGCAGGGG...TGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp ATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTCCACTGTGGTTCCCCTaGGCCAGGTCTGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: IHCQNVAHGRLMVSLLHVPLWFP*ARSAPP
Trigger: GGGAGGAGCAGACCTGGCGCAGGGGAACCACAGTGG...AACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp ATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCTTGGCTTTTGATGCCTaGCTTGGCTTCGAAGCAACC +
Preference number: 4 (lower is better)
Translates to: MQGAVCTSRCRADSCTGRLAFDA*LGFEAT
Trigger: GGTTGCTTCGAAGCCAAGGCAGGCATCAAAAGCCAA...GCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp AGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCGGGTGTCCTGAGGGATaGTGGTGCAGAAGGCCACTT +
Preference number: 4 (lower is better)
Translates to: RASTVKMWPTGGLWSHCCGCPEG*WCRRPL
Trigger: AAGTGGCCTTCTGCACCAGCATCCCTCAGGACACCC...GCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp CTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTTGCCGGGCTGACTCCTaGACAGGGCGCACTGAACTG +
Preference number: 4 (lower is better)
Translates to: LGGGDLYSTLNDSAQECPCRADS*TGRTEL
Trigger: CAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCA...AGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp CTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTCAGGGGGCTGAAGACTaGTGTGTACACGATAGTGTG +
Preference number: 4 (lower is better)
Translates to: LCVQADAGLTPAQGALNCQGAED*CVHDSV
Trigger: CACACTATCGTGTACACAGCAGTCTTCAGCCCCCTG...ACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp ACCTGCACCCCTACCCCTGGGTGTTCCATCCACCTCGATCTGGCACTGGATCTCCTTGGCAGCGTGATTTaGCCTCTGGTTCCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: TCTPTPGCSIHLDLALDLLGSVI*PLVPAL
Trigger: TAAAGCAGGAACCAGAGGGCAAATCACGCTGCCAAG...GAGATCCAGTGCCAGATCGAGGTGGATGGAACACCCAGGGGTAGGGGTGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp CTAGGCTTTTTCAGGGTGGGGGCCTCAGTCTGCTGTTGTGCCGGGCCGGGCCTTAGGTGGTTGGATATGTaGGTTTCCTGTGATTCTTGC +
Preference number: 4 (lower is better)
Translates to: LGFFRVGASVCCCAGPGLRWLDM*VSCDSC
Trigger: GCAAGAATCACAGGAAACCCACATATCCAACCACCT...AAGGCCCGGCCCGGCACAACAGCAGACTGAGGCCCCCACCCTGAAAAAGCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR CCA 90 bp ACCTGCACCCCTACCCCTGGGTGTTCCATCCACCTCGATCTGGCACTGGATCTCTTGATGGATACATCGTaGAGTCCCAGGGCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: TCTPTPGCSIHLDLALDLLMDTS*SPRACS
Trigger: AGAGCAAGCCCTGGGACTCCACGATGTATCCATCAA...GAGATCCAGTGCCAGATCGAGGTGGATGGAACACCCAGGGGTAGGGGTGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp GTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGGGCCACCATGGCCTGCTGGGTaGCCAGAGTCCTTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: VKMWPTGGLWSHCCMLGPPWPAG*PESFCP
Trigger: AGGACAAAAGGACTCTGGCCACCCAGCAGGCCATGG...TGGCCCCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp ATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCATGCCCATGGCCTGCTaGGTGGCCAGAGTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: ITLKGIHCQNVAHGRLMVMPMAC*VARVLL
Trigger: CAAAAGGACTCTGGCCACCCAGCAGGCCATGGGCAT...GACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp ATGCTGGTGCAGAAGGCCACTTTGGCTTTTGATGCCTGCCTTGGCTTCGAAGCAGCTTCGAAGCAACCTTaGGGGCCGTGGACAGCATGC +
Preference number: 4 (lower is better)
Translates to: MLVQKATLAFDACLGFEAASKQP*GPWTAC
Trigger: GCATGCTGTCCACGGCCCCCAAGGTTGCTTCGAAGC...TGCTTCGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCACCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR CCA 90 bp GCCTGGGTCTGGGACCAGTGTGTACCAGCAAGCATGGTCTGTGGGGTCAGCTGTTGCAGAAGGCCACTTTaGCTTTTGATGCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: AWVWDQCVPASMVCGVSCCRRPL*LLMPAL
Trigger: CAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCA...ACAGCTGACCCCACAGACCATGCTTGCTGGTACACACTGGTCCCAGACCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp GAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACGTTGGGGCCAACAGTTaGCCTTGGAAATCTGTATCC +
Preference number: 4 (lower is better)
Translates to: ELCVQADAGLTPAQGALNVGANS*PWKSVS
Trigger: GGATACAGATTTCCAAGGCCAACTGTTGGCCCCAAC...GTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CCA 90 bp CCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCTCACTGTTGCATGTTaGGGCCAACAGTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: PMQGAVCTSRCRADSCTGLTVAC*GQQLAL
Trigger: CAAGGCCAACTGTTGGCCCCAACATGCAACAGTGAG...CCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CCA 90 bp GTCTGGGACCAGTGTGTACCAGCAAGCATGGTCTGTGGGGTCAGCTGTCACGCTCCCACGGGAGGCTTATaGTCTCACTGTTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: VWDQCVPASMVCGVSCHAPTGGL*SHCCML
Trigger: CAACATGCAACAGTGAGACCATAAGCCTCCCGTGGG...AGCGTGACAGCTGACCCCACAGACCATGCTTGCTGGTACACACTGGTCCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp GGGCTGAAGACTGCTGTGTACACGATAGTGTGCCAACTCAGGAAGCAGCTCCAGGGAAGCAGCTCCAGGTaGCATCCAGGTTTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: GLKTAVYTIVCQLRKQLQGSSSR*HPGLSC
Trigger: GCAGGACAAACCTGGATGCCACCTGGAGCTGCTTCC...CTGGAGCTGCTTCCTGAGTTGGCACACTATCGTGTACACAGCAGTCTTCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp TCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCTTCTCTCCCATCCACCTCGATCTaGCACTGGATCTCCTCGTTG +
Preference number: 4 (lower is better)
Translates to: SVGSAVTLLRKTMVPASLPSTSI*HWISSL
Trigger: CAACGAGGAGATCCAGTGCCAGATCGAGGTGGATGG...GAGAGAAGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp TGTCCTGAGGGATGCTGGTGCAGAAGGCCACTTTGGCTTTTGATGCCTGCCTTGAGCAAGCATGGTCTGTaGGGTCAGCTGTCACGCTCC +
Preference number: 4 (lower is better)
Translates to: CPEGCWCRRPLWLLMPALSKHGL*GQLSRS
Trigger: GGAGCGTGACAGCTGACCCCACAGACCATGCTTGCT...CAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCACCAGCATCCCTCAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR CCA 90 bp CGACAGGCCTGGGTCTGGGACCAGTGTGTACCAGCAAGCATGGTCTGTGGGGTCTGTGTCCTCACATGGTaGAGAGAGAGATCATCTCTC +
Preference number: 4 (lower is better)
Translates to: RQAWVWDQCVPASMVCGVCVLTW*RERSSL
Trigger: GAGAGATGATCTCTCTCTCCACCATGTGAGGACACA...GACCCCACAGACCATGCTTGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp TGGGCCCCAGGCCAAGTCAGGTGTGTCGGCCTCCTGCCCCTCCTACTGGGCTCTGTGCAAATGATAATCTaGTCCGTGCTTCAATTTCTA +
Preference number: 4 (lower is better)
Translates to: WAPGQVRCVGLLPLLLGSVQMII*SVLQFL
Trigger: TAGAAATTGAAGCACGGATCAGATTATCATTTGCAC...AGAGCCCAGTAGGAGGGGCAGGAGGCCGACACACCTGACTTGGCCTGGGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp CTGGATCTCCTCGTTGACATCGTGGAGGAAGGCACTCAAAGCTTCCTGTTCGACTCTGCTGCCTCCACTTaGGAGGGGCTTCTACTCAGG +
Preference number: 4 (lower is better)
Translates to: LDLLVDIVEEGTQSFLFDSAAST*EGLLLR
Trigger: CCTGAGTAGAAGCCCCTCTCAAGTGGAGGCAGCAGA...GTCGAACAGGAAGCTTTGAGTGCCTTCCTCCACGATGTCAACGAGGAGATCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp CCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGACCAAGCAGCTATCATaGGGCTATGGAAGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: PMQGAVCTSRCRADSCTGTKQLS*GYGSVA
Trigger: AGCGACACTTCCATAGCCTCATGATAGCTGCTTGGT...CCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR TCA 90 bp TGGGCTCTTTCTCAAACCCCTTTTCAGGCTCCGAAGAACTCTGAGGCAGGCTGCAGTTTCATTTCCTGGTaGGGGCTCTCTTCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: WALSQTPFQAPKNSEAGCSFISW*GLSSGP
Trigger: AGGCCCGGAAGAGAGCCCTCACCAGGAAATGAAACT...GCAGCCTGCCTCAGAGTTCTTCGGAGCCTGAAAAGGGGTTTGAGAAAGAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp AGCACACTGCTGATGTCCGACAGGCCTGGGTCTGGGACCAGTGTGTACCAGCAAAAACCATCCTCTTCTTaGCAGCCGTGGGTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: STLLMSDRPGSGTSVYQQKPSSS*QPWVQL
Trigger: AAGCTGAACCCACGGCTGGCAAGAAGAGGATGGTTT...TTGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCGGACATCAGCAGTGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp GCTTCCTGTTCGACTTTGCCATCCTCACACGACTATGGCCTCCTTCCAGGGGGCTGGAGTCCCAGGGCTTaGTCTACACCTGCTAATTCT +
Preference number: 4 (lower is better)
Translates to: ASCSTLPSSHDYGLLPGGWSPRA*STPANS
Trigger: AGAATTAGCAGGTGTAGAGCAAGCCCTGGGACTCCA...GCCCCCTGGAAGGAGGCCATAGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp GCACCCCTACCCCTGGGTGTTCCATCCACCTCGATCTGGCACTGGATCTCCTCGCAGGATGATAAGATGTaGCTGGAGGAAGTGGTTGAT +
Preference number: 4 (lower is better)
Translates to: APLPLGVPSTSIWHWISSQDDKM*LEEVVD
Trigger: ATCAACCACTTCCTCCAGGCACATCTTATCATCCTG...CGAGGAGATCCAGTGCCAGATCGAGGTGGATGGAACACCCAGGGGTAGGGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp CATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTGTGTGCCGAGTCTGCTaGCTCCACTTGAGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: HPLSKCGPREAYGLTVACVCRVC*LHLRGA
Trigger: AGCCCCTCTCAAGTGGAGGCAGCAGACTCGGCACAC...ACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp CCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGGATGTGTGCCGAGTCTaGTGCCTCCACTTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PLSKCGPREAYGLTVACWDVCRV*CLHLRG
Trigger: CCCTCTCAAGTGGAGGCAGCAGACTCGGCACACATC...CCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp CATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTATGGGCGACGATGTGTaGCGAGTCTGCTGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: HPLSKCGPREAYGLTVACMGDDV*RVCCLH
Trigger: GTGGAGGCAGCAGACTCGGCACACATCGTCGCCCAT...ACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp ATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCAGAGTCCTTTTGTCCTaGGGTCCATATAAGAGGGTC +
Preference number: 4 (lower is better)
Translates to: MQGAVCTSRCRADSCTGRRVLLS*GPYKRV
Trigger: GACCCTCTTATATGGACCGCAGGACAAAAGGACTCT...GCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp GTCTGGGACCAGTGTGTACCAGCAAGCATGGTCTGTGGGGTCAGCTGTCACGCTTTGGCTTTTGATGCCTaGCTTGGCTTCGAAGCAACC +
Preference number: 4 (lower is better)
Translates to: VWDQCVPASMVCGVSCHALAFDA*LGFEAT
Trigger: GGTTGCTTCGAAGCCAAGGCAGGCATCAAAAGCCAA...AGCGTGACAGCTGACCCCACAGACCATGCTTGCTGGTACACACTGGTCCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp CTGGTGCAGAAGGCCACTTTGGCTTTTGATGCCTGCCTTGGCTTCGAAGCAACCCCTGAGGGATGCTGGTaGAGAAGGCCACTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: LVQKATLAFDACLGFEATPEGCW*RRPLWL
Trigger: AAGCCAAAGTGGCCTTCTGCACCAGCATCCCTCAGG...GGTTGCTTCGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000459771.5
ENST00000480371.1
CDS-3UTR GCA 90 bp CTTCCTGAAGTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTCTCAGTCTGCTGTTGTaGCGGGCCGGGCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LPEVHCPDLTPHLCKELCLSLLL*RAGPSP
Trigger: TGGGGAAGGCCCGGCCCGGCACAACAGCAGACTGAG...ACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAACTTCAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp TGGGCTCTTTCTCAAACCCCTTTTCAGGCTCCGAAGAACTCTGAGGCAGGCTGCGTGTGTACAAGCAGATaGCGGGCTGACTCCTGCACA +
Preference number: 4 (lower is better)
Translates to: WALSQTPFQAPKNSEAGCVCTSR*RADSCT
Trigger: TGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACAC...GCAGCCTGCCTCAGAGTTCTTCGGAGCCTGAAAAGGGGTTTGAGAAAGAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp AGCACACTGCTGATGTCCGACAGGCCTGGGTCTGGGACCAGTGTGTACCAGCAAGTGTACACGATAGTGTaGCAACTCAGGAAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: STLLMSDRPGSGTSVYQQVYTIV*QLRKQL
Trigger: GAGCTGCTTCCTGAGTTGGCACACTATCGTGTACAC...TTGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCGGACATCAGCAGTGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp GCTTCCTGTTCGACTTTGCCATCCTCACACGACTATGGCCTCCTTCCAGGGGGCTCTTCTTGCCAGCCGTaGGTTCAGCTTTCTAGGTCT +
Preference number: 4 (lower is better)
Translates to: ASCSTLPSSHDYGLLPGGSSCQP*VQLSRS
Trigger: AGACCTAGAAAGCTGAACCCACGGCTGGCAAGAAGA...GCCCCCTGGAAGGAGGCCATAGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp CCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCAACGCACAAGCTCATaGACGGCCTGTTTGTACTCA +
Preference number: 4 (lower is better)
Translates to: PMQGAVCTSRCRADSCTGQRTSS*TACLYS
Trigger: TGAGTACAAACAGGCCGTCCATGAGCTTGTGCGTTG...CCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp GAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTATAGGGAGGCACAATaGAGTTGGCGAGGATTTGTC +
Preference number: 4 (lower is better)
Translates to: ELCVQADAGLTPAQGALNYREAQ*SWRGFV
Trigger: GACAAATCCTCGCCAACTCCATTGTGCCTCCCTATA...GTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp GCACCCCTACCCCTGGGTGTTCCATCCACCTCGATCTGGCACTGGATCTCCTCGGCTCTGCCCATGGTATaGAAAAGCTCAATGGAAAAC +
Preference number: 4 (lower is better)
Translates to: APLPLGVPSTSIWHWISSALPMV*KSSMEN
Trigger: GTTTTCCATTGAGCTTTTCCATACCATGGGCAGAGC...CGAGGAGATCCAGTGCCAGATCGAGGTGGATGGAACACCCAGGGGTAGGGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp CTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTGAAGCGACAGCAGCATaGGCGACGATGTGTGCCGAG +
Preference number: 4 (lower is better)
Translates to: LGGGDLYSTLNDSAQECPEATAA*ATMCAE
Trigger: CTCGGCACACATCGTCGCCCATGCTGCTGTCGCTTC...AGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp GTCTGGGACCAGTGTGTACCAGCAAGCATGGTCTGTGGGGTCAGCTGTCACGCTTGCTCAGCTACATCATaGTGCTCGTGTCTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: VWDQCVPASMVCGVSCHACSATS*CSCLPE
Trigger: TTCAGGGAGACACGAGCACCATGATGTAGCTGAGCA...AGCGTGACAGCTGACCCCACAGACCATGCTTGCTGGTACACACTGGTCCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp GAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACCAAATGCTTCCACTTTaGCTTCCAGGGACTCTCTCA +
Preference number: 4 (lower is better)
Translates to: ELCVQADAGLTPAQGALNQMLPL*LPGTLS
Trigger: TGAGAGAGTCCCTGGAAGCCAAAGTGGAAGCATTTG...GTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CCA 90 bp GGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGCCATGGCCTGCTGGGTaGCCAGAGTCCTTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: GGGDLYSTLNDSAQECPRPWPAG*PESFCP
Trigger: AGGACAAAAGGACTCTGGCCACCCAGCAGGCCATGG...CCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp AGCACACTGCTGATGTCCGACAGGCCTGGGTCTGGGACCAGTGTGTACCAGCAATGCAGAAGGCCACTTTaGCTTTTGATGCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: STLLMSDRPGSGTSVYQQCRRPL*LLMPAL
Trigger: CAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCA...TTGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCGGACATCAGCAGTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp CCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGTGCAGAAGGCCACTTTaGCTTTTGATGCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: PMQGAVCTSRCRADSCTGCRRPL*LLMPAL
Trigger: CAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCA...CCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CCA 90 bp GTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTTGGTTGGGGCCAACAGTTaGCCTTGGAAATCTGTATCC +
Preference number: 4 (lower is better)
Translates to: VCTSRCRADSCTGRTELLVGANS*PWKSVS
Trigger: GGATACAGATTTCCAAGGCCAACTGTTGGCCCCAAC...CAACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CCA 90 bp TGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTTGAAGCCCACGGGAGGCTTATaGTCTCACTGTTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: CTSRCRADSCTGRTELLKPTGGL*SHCCML
Trigger: CAACATGCAACAGTGAGACCATAAGCCTCCCGTGGG...CTTCAACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CCA 90 bp AGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTGGAAGCAGCTCCAGGTaGCATCCAGGTTTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SIYHPEGHPLSKCGPREAGSSSR*HPGLSC
Trigger: GCAGGACAAACCTGGATGCCACCTGGAGCTGCTTCC...AGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp GCAAGCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTCCTCGTTGACATCGTaGAGGAAGGCACTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: ASMVCGVSCHAPEEDNGPSSLTS*RKALKA
Trigger: AGCTTTGAGTGCCTTCCTCCACGATGTCAACGAGGA...GGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp GTACCAGCAAGCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATCCATCCACCTCGATCTaGCACTGGATCTCCTCGTTG +
Preference number: 4 (lower is better)
Translates to: VPASMVCGVSCHAPEEDNPSTSI*HWISSL
Trigger: CAACGAGGAGATCCAGTGCCAGATCGAGGTGGATGG...ATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGCTTGCTGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp AGCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCTTTCCCCATCAATACTaGAGGTGGTGCCCTGCACAA +
Preference number: 4 (lower is better)
Translates to: SMVCGVSCHAPEEDNGPCFPHQY*RWCPAQ
Trigger: TTGTGCAGGGCACCACCTCCAGTATTGATGGGGAAA...GCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp GTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGGGCCAGTGTACCAGCAAGCATaGTCTGTGGGGTCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: VKMWPTGGLWSHCCMLGPVYQQA*SVGSAV
Trigger: GACAGCTGACCCCACAGACCATGCTTGCTGGTACAC...TGGCCCCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp CAGGGGGCTGAAGACTGCTGTGTACACGATAGTGTGCCAACTCAGGAAGCAGCTGTGTACCAGCAAGCATaGTCTGTGGGGTCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: QGAEDCCVHDSVPTQEAAVYQQA*SVGSAV
Trigger: GACAGCTGACCCCACAGACCATGCTTGCTGGTACAC...AGCTGCTTCCTGAGTTGGCACACTATCGTGTACACAGCAGTCTTCAGCCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp ACCTGCACCCCTACCCCTGGGTGTTCCATCCACCTCGATCTGGCACTGGATCTCTTCAAAAACTCGGCATaGACTCTCAGTTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: TCTPTPGCSIHLDLALDLFKNSA*TLSSGC
Trigger: GCAGCCTGAACTGAGAGTCCATGCCGAGTTTTTGAA...GAGATCCAGTGCCAGATCGAGGTGGATGGAACACCCAGGGGTAGGGGTGCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp TGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTTGAAGCAACCTTGGGGGCCCTaGGCAAGGAAGATCTTTTAC +
Preference number: 4 (lower is better)
Translates to: CTSRCRADSCTGRTELLKQPWGP*ARKIFY
Trigger: GTAAAAGATCTTCCTTGCCCAGGGCCCCCAAGGTTG...CTTCAACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480371.1
3UTR CAA 72 bp TCGTGGAGGAAGGCACTCAAAGCTTCCTGTTCGACTTaGCCATCCTCACACGACTATGGCCTCCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SWRKALKASCST*PSSHDYGLLPG
Trigger: CCCTGGAAGGAGGCCATAGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGCTTTGAGTGCCTTCCTCCACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp ACCTGCACCCCTACCCCTGGGTGTTCCATCCACCTCGATCTGGCACTGGATCTCAATCACAACTGCCAATaGGACCTACTCAGTCAGTTG +
Preference number: 4 (lower is better)
Translates to: TCTPTPGCSIHLDLALDLNHNCQ*DLLSQL
Trigger: CAACTGACTGAGTAGGTCTCATTGGCAGTTGTGATT...GAGATCCAGTGCCAGATCGAGGTGGATGGAACACCCAGGGGTAGGGGTGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp GTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTTGTTGTTTTGCTTGCAGTaGCAGTCCTTTCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VCTSRCRADSCTGRTELLLFCLQ*QSFQLE
Trigger: CTCCAGCTGAAAGGACTGTCACTGCAAGCAAAACAA...CAACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR TCA 90 bp TGTCCTAGGCTTTTTCAGGGTGGGGGCCTCAGTCTGCTGTTGTGCCGGGCCGGGGCTTCCTTAAATTTTTaGAGGGAGAGTAAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: CPRLFQGGGLSLLLCRAGASLNF*RESKAL
Trigger: CAGAGCTTTACTCTCCCTTCAAAAATTTAAGGAAGC...CCCGGCCCGGCACAACAGCAGACTGAGGCCCCCACCCTGAAAAAGCCTAGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR TCA 90 bp CAGAAGGCCACTTTGGCTTTTGATGCCTGCCTTGGCTTCGAAGCAACCTTGGGGCCTGGAGGAAGTGGTTaGTGGATACATCGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: QKATLAFDACLGFEATLGPGGSG*WIHRGV
Trigger: GACTCCACGATGTATCCATCAACCACTTCCTCCAGG...CCCCAAGGTTGCTTCGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR TCA 90 bp CCCTGTCGTGGCTCTACTGAGTTTATTTTCCCCATCAATACTGGAGGTGGTGCCTCTGCTGCCTCCACTTaGGAGGGGCTTCTACTCAGG +
Preference number: 4 (lower is better)
Translates to: PCRGSTEFIFPINTGGGASAAST*EGLLLR
Trigger: CCTGAGTAGAAGCCCCTCTCAAGTGGAGGCAGCAGA...GGCACCACCTCCAGTATTGATGGGGAAAATAAACTCAGTAGAGCCACGACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp GTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGTGCTCGTGTCTCCCTaGAGCGACAGCAGCATGGGC +
Preference number: 4 (lower is better)
Translates to: VHCPDLTPHLCKELCVQAVLVSP*SDSSMG
Trigger: GCCCATGCTGCTGTCGCTTCAGGGAGACACGAGCAC...TGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR TCA 90 bp GGAAGCTGGGAAGTCTCAAGGTGCCAACAGTTTCATTTCCTGGTGAGGGCTCTCCTGCCACCTCGGGACTaGAATCGCCAAATGCTTCCA +
Preference number: 4 (lower is better)
Translates to: GSWEVSRCQQFHFLVRALLPPRD*NRQMLP
Trigger: TGGAAGCATTTGGCGATTTCAGTCCCGAGGTGGCAG...GAGAGCCCTCACCAGGAAATGAAACTGTTGGCACCTTGAGACTTCCCAGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp AGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTCTGCCACCTCGGGACTaGAATCGCCAAATGCTTCCA +
Preference number: 4 (lower is better)
Translates to: SIYHPEGHPLSKCGPREALPPRD*NRQMLP
Trigger: TGGAAGCATTTGGCGATTTCAGTCCCGAGGTGGCAG...AGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp TCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGGGCCAAGGCCACTTTGGCTTTTaGTGCCTGCCTTGGCTTCGA +
Preference number: 4 (lower is better)
Translates to: SKCGPREAYGLTVACWGQGHFGF*CLPWLR
Trigger: TCGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCC...TTGGCCCCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp AGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTGGCCACTTTGGCTTTTaGTGCCTGCCTTGGCTTCGA +
Preference number: 4 (lower is better)
Translates to: SIYHPEGHPLSKCGPREAGHFGF*CLPWLR
Trigger: TCGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCC...AGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp CACACTGCTGATGTCCGACAGGCCTGGGTCTGGGACCAGTGTGTACCAGCAAGCTTTTCTAGGCGGAGGTaGTTTGTACAGCACCCTAAA +
Preference number: 4 (lower is better)
Translates to: HTADVRQAWVWDQCVPASFSRRR*FVQHPK
Trigger: TTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAA...GCTTGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCGGACATCAGCAGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp TCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCTTCTCTCCTGCACAGGGCGCACTaGACTGTTGAAGAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: SVGSAVTLLRKTMVPASLLHRAH*TVEEKF
Trigger: AAACTTCTCTTCAACAGTTCAGTGCGCCCTGTGCAG...GAGAGAAGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp TCGTTGACATCGTGGAGGAAGGCACTCAAAGCTTCCTGTTCGACTTTGCCATCCCAGCTGTCACGCTCCTaGGGAAGACAATGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SLTSWRKALKASCSTLPSQLSRS*GRQWSL
Trigger: CAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTG...GGATGGCAAAGTCGAACAGGAAGCTTTGAGTGCCTTCCTCCACGATGTCAACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp CCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGGTTGTCTTGGCAGCGTaGTTTGCCCTCTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: PLSKCGPREAYGLTVACWVVLAA*FALWFL
Trigger: CAGGAACCAGAGGGCAAATCACGCTGCCAAGACAAC...CCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
CDS-3UTR TCA 90 bp GTACCAGCAAGCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATAGGCAGAGGTTGCAGTaGGCCAAGATCACACCACTA +
Preference number: 4 (lower is better)
Translates to: VPASMVCGVSCHAPEEDNRQRLQ*AKITPL
Trigger: TAGTGGTGTGATCTTGGCTCACTGCAACCTCTGCCT...ATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGCTTGCTGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp GAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACGCATGTTGTTTTGCTTaGAGTGACAGTCCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: ELCVQADAGLTPAQGALNACCFA*SDSPFS
Trigger: GCTGAAAGGACTGTCACTGCAAGCAAAACAACATGC...GTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp TGTCGTGGCTCTACTGAGTTTATTTTCCCCATCAATACTGGAGGTGGTGCCCTGGTGTGCCGAGTCTGCTaGCTCCACTTGAGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: CRGSTEFIFPINTGGGALVCRVC*LHLRGA
Trigger: AGCCCCTCTCAAGTGGAGGCAGCAGACTCGGCACAC...CAGGGCACCACCTCCAGTATTGATGGGGAAAATAAACTCAGTAGAGCCACGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp GTACCAGCAAGCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATTCAGCTACATCATGGTaGTCGTGTCTCCCTGAAGCG +
Preference number: 4 (lower is better)
Translates to: VPASMVCGVSCHAPEEDNSATSW*SCLPEA
Trigger: CGCTTCAGGGAGACACGAGCACCATGATGTAGCTGA...ATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGCTTGCTGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp AGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCTCAGCTACATCATGGTaGTCGTGTCTCCCTGAAGCG +
Preference number: 4 (lower is better)
Translates to: RASTVKMWPTGGLWSHCCSATSW*SCLPEA
Trigger: CGCTTCAGGGAGACACGAGCACCATGATGTAGCTGA...GCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp ATGCTGGTGCAGAAGGCCACTTTGGCTTTTGATGCCTGCCTTGGCTTCGAAGCAGAGCCGGTATGTCTCTaGCACCTCGGGACTGAAATC +
Preference number: 4 (lower is better)
Translates to: MLVQKATLAFDACLGFEAEPVCL*HLGTEI
Trigger: GATTTCAGTCCCGAGGTGGCAGAGACATACCGGCTC...TGCTTCGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCACCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000459771.5
ENST00000480371.1
CDS-3UTR GCA 90 bp ATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTACCCCTGCGCCAGGTCTaGTCCTCCCAGGAGCCGGTA +
Preference number: 4 (lower is better)
Translates to: ILTVEFHFLGGGDLYSTLPLRQV*SSQEPV
Trigger: TACCGGCTCCTGGGAGGAGCAGACCTGGCGCAGGGG...TAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp GAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCCACTGTGGTTCCCCTaGGCCAGGTCTGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: EFHFLGGGDLYSTLNDSAPLWFP*ARSAPP
Trigger: GGGAGGAGCAGACCTGGCGCAGGGGAACCACAGTGG...GGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp GTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTTGAGAGTCCTTTTGTCCTaGGGTCCATATAAGAGGGTC +
Preference number: 4 (lower is better)
Translates to: VCTSRCRADSCTGRTELLRVLLS*GPYKRV
Trigger: GACCCTCTTATATGGACCGCAGGACAAAAGGACTCT...CAACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp GTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGGTGTGTCGGCCTCCTaGCCCTCCTACTGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: VHCPDLTPHLCKELCVQAGVSAS*PSYWAL
Trigger: AAGAGCCCAGTAGGAGGGGCAGGAGGCCGACACACC...TGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp GTACCAGCAAGCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATCAGGGGGCTGAAGACTaGTGTGTACACGATAGTGTG +
Preference number: 4 (lower is better)
Translates to: VPASMVCGVSCHAPEEDNQGAED*CVHDSV
Trigger: CACACTATCGTGTACACAGCAGTCTTCAGCCCCCTG...ATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGCTTGCTGGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp ATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCAGGTGGTTGGATATGTaGGTTTCCTGTGATTCTTGC +
Preference number: 4 (lower is better)
Translates to: MQGAVCTSRCRADSCTGRRWLDM*VSCDSC
Trigger: GCAAGAATCACAGGAAACCCACATATCCAACCACCT...GCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp AGCTTCCTGTTCGACTTTGCCATCCTCACACGACTATGGCCTCCTTCCAGGGGGTGCTCAGCTACATCATaGTGCTCGTGTCTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: SFLFDFAILTRLWPPSRGCSATS*CSCLPE
Trigger: TTCAGGGAGACACGAGCACCATGATGTAGCTGAGCA...CCCCCTGGAAGGAGGCCATAGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp GGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGCTTTTTTTGCGGGCCCCACTGTaGTTCCCCTGCGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GDLYSTLNDSAQECPRLFLRAPL*FPCARS
Trigger: AGACCTGGCGCAGGGGAACCACAGTGGGGCCCGCAA...AAAAAGCCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACC
54% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CCA 90 bp GAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCTTGCGGGCCCCACTGTaGTTCCCCTGCGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: EFHFLGGGDLYSTLNDSALRAPL*FPCARS
Trigger: AGACCTGGCGCAGGGGAACCACAGTGGGGCCCGCAA...GGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CCA 90 bp CTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGTGGACAGCATGCCCATaGCCTGCTGGGTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LYSIYHPEGHPLSKCGPRWTACP*PAGWPE
Trigger: CTCTGGCCACCCAGCAGGCCATGGGCATGCTGTCCA...CCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp CTTCCTGAAGTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTTGGACAGCATGCCCATaGCCTGCTGGGTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LPEVHCPDLTPHLCKELCWTACP*PAGWPE
Trigger: CTCTGGCCACCCAGCAGGCCATGGGCATGCTGTCCA...ACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAACTTCAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp GTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCACAACCTTGGGGGCCGTaGACAGCATGCCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: VHCPDLTPHLCKELCVQAQPWGP*TACPWP
Trigger: AGGCCATGGGCATGCTGTCCACGGCCCCCAAGGTTG...TGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp CTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGCAACCTTGGGGGCCGTaGACAGCATGCCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: LYSIYHPEGHPLSKCGPRQPWGP*TACPWP
Trigger: AGGCCATGGGCATGCTGTCCACGGCCCCCAAGGTTG...CCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp ATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGCTTCGAAGCAACCTTaGGGGCCGTGGACAGCATGC +
Preference number: 4 (lower is better)
Translates to: IHCQNVAHGRLMVSLLHVASKQP*GPWTAC
Trigger: GCATGCTGTCCACGGCCCCCAAGGTTGCTTCGAAGC...AACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp TGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTTGAAGGTTGGGGCCAACAGTTaGCCTTGGAAATCTGTATCC +
Preference number: 4 (lower is better)
Translates to: CTSRCRADSCTGRTELLKVGANS*PWKSVS
Trigger: GGATACAGATTTCCAAGGCCAACTGTTGGCCCCAAC...CTTCAACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CCA 90 bp CTGGTGCAGAAGGCCACTTTGGCTTTTGATGCCTGCCTTGGCTTCGAAGCAACCCTCACTGTTGCATGTTaGGGCCAACAGTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LVQKATLAFDACLGFEATLTVAC*GQQLAL
Trigger: CAAGGCCAACTGTTGGCCCCAACATGCAACAGTGAG...GGTTGCTTCGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000459771.5
ENST00000480371.1
CDS-3UTR CCA 90 bp ACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTCTCACTGTTGCATGTTaGGGCCAACAGTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: TPHLCKELCVQADAGLTPLTVAC*GQQLAL
Trigger: CAAGGCCAACTGTTGGCCCCAACATGCAACAGTGAG...AGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CCA 90 bp CAGAAGGCCACTTTGGCTTTTGATGCCTGCCTTGGCTTCGAAGCAACCTTGGGGCCCACGGGAGGCTTATaGTCTCACTGTTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: QKATLAFDACLGFEATLGPTGGL*SHCCML
Trigger: CAACATGCAACAGTGAGACCATAAGCCTCCCGTGGG...CCCCAAGGTTGCTTCGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000459771.5
ENST00000480371.1
CDS-3UTR CCA 90 bp GTACCAGCAAGCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATCCCACGGGAGGCTTATaGTCTCACTGTTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: VPASMVCGVSCHAPEEDNPTGGL*SHCCML
Trigger: CAACATGCAACAGTGAGACCATAAGCCTCCCGTGGG...ATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGCTTGCTGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp GGGCTGAAGACTGCTGTGTACACGATAGTGTGCCAACTCAGGAAGCAGCTCCAGTCCACTGTCAAAATGTaGCCCACGGGAGGCTTATGG +
Preference number: 4 (lower is better)
Translates to: GLKTAVYTIVCQLRKQLQSTVKM*PTGGLW
Trigger: CCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGA...CTGGAGCTGCTTCCTGAGTTGGCACACTATCGTGTACACAGCAGTCTTCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp TCCTTTTGTCCTGCGGTCCATATAAGAGGGTCTGGATCTGGAGACACTGTAGAACTTACACCTGCCTCCTaGGCCCCAGGCCAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: SFCPAVHIRGSGSGDTVELTPAS*APGQVR
Trigger: CCTGACTTGGCCTGGGGCCCAGGAGGCAGGTGTAAG...TTCTACAGTGTCTCCAGATCCAGACCCTCTTATATGGACCGCAGGACAAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR CCA 90 bp TGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCTTGTCCTGCCTGCAGTaGAGGCCACAGGAGGGATGC +
Preference number: 4 (lower is better)
Translates to: CPDLTPHLCKELCVQADALSCLQ*RPQEGC
Trigger: GCATCCCTCCTGTGGCCTCCACTGCAGGCAGGACAA...GGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp CTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTATCCTCACACGACTATaGCCTCCTTCCAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LGGGDLYSTLNDSAQECPILTRL*PPSRGL
Trigger: CAGCCCCCTGGAAGGAGGCCATAGTCGTGTGAGGAT...AGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp TGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACCATGGCCACAGTCTGTaGGACCAGGGGAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: CFIAYITLKGIHCQNVAHHGHSL*DQGREG
Trigger: CCCCTCCCTCCCCTGGTCCCACAGACTGTGGCCATG...GTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp TGGATCTCCTCGTTGACATCGTGGAGGAAGGCACTCAAAGCTTCCTGTTCGACTAGCAAGCATGGTCTGTaGGGTCAGCTGTCACGCTCC +
Preference number: 4 (lower is better)
Translates to: WISSLTSWRKALKASCSTSKHGL*GQLSRS
Trigger: GGAGCGTGACAGCTGACCCCACAGACCATGCTTGCT...AGTCGAACAGGAAGCTTTGAGTGCCTTCCTCCACGATGTCAACGAGGAGATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp GAGGAAGGCACTCAAAGCTTCCTGTTCGACTTTGCCATCCTCACACGACTATGGAGCAAGCATGGTCTGTaGGGTCAGCTGTCACGCTCC +
Preference number: 4 (lower is better)
Translates to: EEGTQSFLFDFAILTRLWSKHGL*GQLSRS
Trigger: GGAGCGTGACAGCTGACCCCACAGACCATGCTTGCT...CCATAGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGCTTTGAGTGCCTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp CATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTGATGTCCGACAGGCCTaGGTCTGGGACCAGTGTGTA +
Preference number: 4 (lower is better)
Translates to: HPLSKCGPREAYGLTVACDVRQA*VWDQCV
Trigger: TACACACTGGTCCCAGACCCAGGCCTGTCGGACATC...ACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp GAGGAAGGCACTCAAAGCTTCCTGTTCGACTTTGCCATCCTCACACGACTATGGGATGTCCGACAGGCCTaGGTCTGGGACCAGTGTGTA +
Preference number: 4 (lower is better)
Translates to: EEGTQSFLFDFAILTRLWDVRQA*VWDQCV
Trigger: TACACACTGGTCCCAGACCCAGGCCTGTCGGACATC...CCATAGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGCTTTGAGTGCCTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR CAA 72 bp TGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTaGGGGCCAACAGTTGGCCTTGGAAATCTGTATCCT +
Preference number: 4 (lower is better)
Translates to: WPTGGLWSHCCM*GPTVGLGNLYP
Trigger: AGGATACAGATTTCCAAGGCCAACTGTTGGCCCCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
3UTR CAA 72 bp TGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTaGAAGAGAAGTTTTTCAGCCACAGTAGTGCTGATG +
Preference number: 4 (lower is better)
Translates to: CRADSCTGRTEL*KRSFSATVVLM
Trigger: CATCAGCACTACTGTGGCTGAAAAACTTCTCTTCAACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
3UTR CAA 72 bp GTTCCATCCACCTCGATCTGGCACTGGATCTCCTCGTaGACATCGTGGAGGAAGGCACTCAAAGCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: VPSTSIWHWISS*TSWRKALKASC
Trigger: ACAGGAAGCTTTGAGTGCCTTCCTCCACGATGTCAACGAGGAGATCCAGTGCCAGATCGAGGTGGATGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp GGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGCCTGGAGGAAGTGGTTaGTGGATACATCGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: GGGDLYSTLNDSAQECPRPGGSG*WIHRGV
Trigger: GACTCCACGATGTATCCATCAACCACTTCCTCCAGG...CCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR TCA 90 bp AGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTCCTGGAGGAAGTGGTTaGTGGATACATCGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: SIYHPEGHPLSKCGPREAPGGSG*WIHRGV
Trigger: GACTCCACGATGTATCCATCAACCACTTCCTCCAGG...AGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR TCA 90 bp GAAGTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGTGCTCGTGTCTCCCTaGAGCGACAGCAGCATGGGC +
Preference number: 4 (lower is better)
Translates to: EVHCPDLTPHLCKELCVQVLVSP*SDSSMG
Trigger: GCCCATGCTGCTGTCGCTTCAGGGAGACACGAGCAC...TTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR TCA 90 bp TGTCCTGAGGGATGCTGGTGCAGAAGGCCACTTTGGCTTTTGATGCCTGCCTTGCTGCACAGGGCGCACTaGACTGTTGAAGAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: CPEGCWCRRPLWLLMPALLHRAH*TVEEKF
Trigger: AAACTTCTCTTCAACAGTTCAGTGCGCCCTGTGCAG...CAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCACCAGCATCCCTCAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000459771.5
ENST00000480371.1
CDS-3UTR TCA 90 bp TGGATCTCCTCGTTGACATCGTGGAGGAAGGCACTCAAAGCTTCCTGTTCGACTGGCTCCGAAGAACTCTaGGGCAGGCTGCACTTTGAA +
Preference number: 4 (lower is better)
Translates to: WISSLTSWRKALKASCSTGSEEL*GRLHFE
Trigger: TTCAAAGTGCAGCCTGCCTCAGAGTTCTTCGGAGCC...AGTCGAACAGGAAGCTTTGAGTGCCTTCCTCCACGATGTCAACGAGGAGATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp GTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGGGCCACATTCACCCCTTAGCTaGCTCCACCCATGTCAACTA +
Preference number: 4 (lower is better)
Translates to: VKMWPTGGLWSHCCMLGPHSPLS*LHPCQL
Trigger: TAGTTGACATGGGTGGAGTCAGCTAAGGGGTGAATG...TGGCCCCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp TGGGCTCTTTCTCAAACCCCTTTTCAGGCTCCGAAGAACTCTGAGGCAGGCTGCCATTCACCCCTTAGCTaGCTCCACCCATGTCAACTA +
Preference number: 4 (lower is better)
Translates to: WALSQTPFQAPKNSEAGCHSPLS*LHPCQL
Trigger: TAGTTGACATGGGTGGAGTCAGCTAAGGGGTGAATG...GCAGCCTGCCTCAGAGTTCTTCGGAGCCTGAAAAGGGGTTTGAGAAAGAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp CTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTGCATGTTGTTTTGCTTaGAGTGACAGTCCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: LCVQADAGLTPAQGALNCACCFA*SDSPFS
Trigger: GCTGAAAGGACTGTCACTGCAAGCAAAACAACATGC...ACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp CCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCAGGATGATAAGATGTaGCTGGAGGAAGTGGTTGAT +
Preference number: 4 (lower is better)
Translates to: PMQGAVCTSRCRADSCTGQDDKM*LEEVVD
Trigger: ATCAACCACTTCCTCCAGGCACATCTTATCATCCTG...CCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp GGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGTCAGCTACATCATGGTaGTCGTGTCTCCCTGAAGCG +
Preference number: 4 (lower is better)
Translates to: GGGDLYSTLNDSAQECPRSATSW*SCLPEA
Trigger: CGCTTCAGGGAGACACGAGCACCATGATGTAGCTGA...CCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp ATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTACCACTGTGGTTCCCCTaGGCCAGGTCTGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: ILTVEFHFLGGGDLYSTLPLWFP*ARSAPP
Trigger: GGGAGGAGCAGACCTGGCGCAGGGGAACCACAGTGG...TAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp GAGGAAGGCACTCAAAGCTTCCTGTTCGACTTTGCCATCCTCACACGACTATGGCCTGAGGGATGCTGGTaGAGAAGGCCACTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: EEGTQSFLFDFAILTRLWPEGCW*RRPLWL
Trigger: AAGCCAAAGTGGCCTTCTGCACCAGCATCCCTCAGG...CCATAGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGCTTTGAGTGCCTTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp CATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTCCTGAGGGATGCTGGTaGAGAAGGCCACTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: HPLSKCGPREAYGLTVACPEGCW*RRPLWL
Trigger: AAGCCAAAGTGGCCTTCTGCACCAGCATCCCTCAGG...ACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp ATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGGTGTCCTGAGGGATaGTGGTGCAGAAGGCCACTT +
Preference number: 4 (lower is better)
Translates to: IHCQNVAHGRLMVSLLHVGCPEG*WCRRPL
Trigger: AAGTGGCCTTCTGCACCAGCATCCCTCAGGACACCC...AACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp GAAATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACGTGGGGGCCTCAGTCTaGTGTTGTGCCGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: EICILTVEFHFLGGGDLYVGASV*CCAGPG
Trigger: GCCCGGCCCGGCACAACAGCAGACTGAGGCCCCCAC...GTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp TGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACTGCCGGGCTGACTCCTaGACAGGGCGCACTGAACTG +
Preference number: 4 (lower is better)
Translates to: CFIAYITLKGIHCQNVAHCRADS*TGRTEL
Trigger: CAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCA...GTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp CTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCATGCCGGGCTGACTCCTaGACAGGGCGCACTGAACTG +
Preference number: 4 (lower is better)
Translates to: LLYSIYHPEGHPLSKCGPCRADS*TGRTEL
Trigger: CAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCA...TGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp CCCTGTCGTGGCTCTACTGAGTTTATTTTCCCCATCAATACTGGAGGTGGTGCCGTGTGTACAAGCAGATaGCGGGCTGACTCCTGCACA +
Preference number: 4 (lower is better)
Translates to: PCRGSTEFIFPINTGGGAVCTSR*RADSCT
Trigger: TGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACAC...GGCACCACCTCCAGTATTGATGGGGAAAATAAACTCAGTAGAGCCACGACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp CTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCAGGTGTGTCGGCCTCCTaGCCCTCCTACTGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: LLYSIYHPEGHPLSKCGPGVSAS*PSYWAL
Trigger: AAGAGCCCAGTAGGAGGGGCAGGAGGCCGACACACC...TGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp TCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGAATCACTGCCCACACCTaGACCCCTACCCCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: SLSRSNSTPMQGAVCTSRITAHT*TPTPGC
Trigger: ACACCCAGGGGTAGGGGTGCAGGTGTGGGCAGTGAT...TCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp CATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAAGGGAAGGGACATCACTaGCCACACCTGCACCCCTAC +
Preference number: 4 (lower is better)
Translates to: HFLGGGDLYSTLNDSAQEGKGHH*PHLHPY
Trigger: GTAGGGGTGCAGGTGTGGGCAGTGATGTCCCTTCCC...TTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp CCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGAGGTGGTTGGATATGTaGGTTTCCTGTGATTCTTGC +
Preference number: 4 (lower is better)
Translates to: PMQGAVCTSRCRADSCTGRWLDM*VSCDSC
Trigger: GCAAGAATCACAGGAAACCCACATATCCAACCACCT...CCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp AGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCGAGGCACAATGGAGTTaGCGAGGATTTGTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: RASTVKMWPTGGLWSHCCEAQWS*RGFVWL
Trigger: AAGCCAGACAAATCCTCGCCAACTCCATTGTGCCTC...GCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp TGGGCTCTTTCTCAAACCCCTTTTCAGGCTCCGAAGAACTCTGAGGCAGGCTGCGAGGCACAATGGAGTTaGCGAGGATTTGTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: WALSQTPFQAPKNSEAGCEAQWS*RGFVWL
Trigger: AAGCCAGACAAATCCTCGCCAACTCCATTGTGCCTC...GCAGCCTGCCTCAGAGTTCTTCGGAGCCTGAAAAGGGGTTTGAGAAAGAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp AGCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCGCTCTGCCCATGGTATaGAAAAGCTCAATGGAAAAC +
Preference number: 4 (lower is better)
Translates to: SMVCGVSCHAPEEDNGPCALPMV*KSSMEN
Trigger: GTTTTCCATTGAGCTTTTCCATACCATGGGCAGAGC...GCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp GTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGGGCCATGCTCAGCTACATCATaGTGCTCGTGTCTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: VKMWPTGGLWSHCCMLGPCSATS*CSCLPE
Trigger: TTCAGGGAGACACGAGCACCATGATGTAGCTGAGCA...TGGCCCCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp TTCTTACAGTTCTGGAAGCTGGGAAGTCTCAAGGTGCCAACAGTTTCATTTCCTTTGCGGGCCCCACTGTaGTTCCCCTGCGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: FLQFWKLGSLKVPTVSFPLRAPL*FPCARS
Trigger: AGACCTGGCGCAGGGGAACCACAGTGGGGCCCGCAA...AGGAAATGAAACTGTTGGCACCTTGAGACTTCCCAGCTTCCAGAACTGTAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp TCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGAGCTTCGAAGCAACCTTaGGGGCCGTGGACAGCATGC +
Preference number: 4 (lower is better)
Translates to: SLSRSNSTPMQGAVCTSRASKQP*GPWTAC
Trigger: GCATGCTGTCCACGGCCCCCAAGGTTGCTTCGAAGC...TCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp AGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTCTCACTGTTGCATGTTaGGGCCAACAGTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SIYHPEGHPLSKCGPREALTVAC*GQQLAL
Trigger: CAAGGCCAACTGTTGGCCCCAACATGCAACAGTGAG...AGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CCA 90 bp TCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGGGCCAATCCACTGTCAAAATGTaGCCCACGGGAGGCTTATGG +
Preference number: 4 (lower is better)
Translates to: SKCGPREAYGLTVACWGQSTVKM*PTGGLW
Trigger: CCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGA...TTGGCCCCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CCA 90 bp GTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCATTGTCCTGCCTGCAGTaGAGGCCACAGGAGGGATGC +
Preference number: 4 (lower is better)
Translates to: VHCPDLTPHLCKELCVQALSCLQ*RPQEGC
Trigger: GCATCCCTCCTGTGGCCTCCACTGCAGGCAGGACAA...TGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp GTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGGGCCATCCTCGTTGACATCGTaGAGGAAGGCACTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: VKMWPTGGLWSHCCMLGPSSLTS*RKALKA
Trigger: AGCTTTGAGTGCCTTCCTCCACGATGTCAACGAGGA...TGGCCCCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp CCCTCCTACTGGGCTCTTTCTCAAACCCCTTTTCAGGCTCCGAAGAACTCTGAGACCTCGATCTGGCACTaGATCTCCTCGTTGACATCG +
Preference number: 4 (lower is better)
Translates to: PSYWALSQTPFQAPKNSETSIWH*ISSLTS
Trigger: CGATGTCAACGAGGAGATCCAGTGCCAGATCGAGGT...CTCAGAGTTCTTCGGAGCCTGAAAAGGGGTTTGAGAAAGAGCCCAGTAGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp GTCTGGGACCAGTGTGTACCAGCAAGCATGGTCTGTGGGGTCAGCTGTCACGCTCCATATAAGAGGGTCTaGATCTGGAGACACTTCTTC +
Preference number: 4 (lower is better)
Translates to: VWDQCVPASMVCGVSCHAPYKRV*IWRHFF
Trigger: GAAGAAGTGTCTCCAGATCCAGACCCTCTTATATGG...AGCGTGACAGCTGACCCCACAGACCATGCTTGCTGGTACACACTGGTCCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394132.7
CDS-3UTR CCA 90 bp CCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCCATATAAGAGGGTCTaGATCTGGAGACACTTCTTC +
Preference number: 4 (lower is better)
Translates to: PMQGAVCTSRCRADSCTGPYKRV*IWRHFF
Trigger: GAAGAAGTGTCTCCAGATCCAGACCCTCTTATATGG...CCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394132.7
ENST00000394135.7
ENST00000558663.5
CDS-3UTR TCA 90 bp TGGGTGGCCAGAGTCCTTTTGTCCTGCGGTCCATATAAGAGGGTCTGGATCTGGACCTACTCAGTCAGTTaGTACTGTTCCTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: WVARVLLSCGPYKRVWIWTYSVS*YCSFCQ
Trigger: CTGGCAGAAGGAACAGTATCAACTGACTGAGTAGGT...CCAGATCCAGACCCTCTTATATGGACCGCAGGACAAAAGGACTCTGGCCACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR TCA 90 bp AGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCTTGTTTTGCTTGCAGTaGCAGTCCTTTCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RASTVKMWPTGGLWSHCCLFCLQ*QSFQLE
Trigger: CTCCAGCTGAAAGGACTGTCACTGCAAGCAAAACAA...GCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR TCA 90 bp TGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCGTGCTCGTGTCTCCCTaGAGCGACAGCAGCATGGGC +
Preference number: 4 (lower is better)
Translates to: CILTVEFHFLGGGDLYSTVLVSP*SDSSMG
Trigger: GCCCATGCTGCTGTCGCTTCAGGGAGACACGAGCAC...GGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR TCA 90 bp AGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTCTGCACAGGGCGCACTaGACTGTTGAAGAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: SIYHPEGHPLSKCGPREALHRAH*TVEEKF
Trigger: AAACTTCTCTTCAACAGTTCAGTGCGCCCTGTGCAG...AGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp TCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCTTCTCTCCTGTCGTGGCTCTACTaGGTTTATTTTCCCCATCAA +
Preference number: 4 (lower is better)
Translates to: SVGSAVTLLRKTMVPASLLSWLY*VYFPHQ
Trigger: TTGATGGGGAAAATAAACTCAGTAGAGCCACGACAG...GAGAGAAGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp GGGCTGAAGACTGCTGTGTACACGATAGTGTGCCAACTCAGGAAGCAGCTCCAGGGGAGAGTAAAGCTCTaGCCATGGTATGGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: GLKTAVYTIVCQLRKQLQGRVKL*PWYGKA
Trigger: AGCTTTTCCATACCATGGGCAGAGCTTTACTCTCCC...CTGGAGCTGCTTCCTGAGTTGGCACACTATCGTGTACACAGCAGTCTTCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp CTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCAATGGGCGACGATGTGTaGCGAGTCTGCTGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: LLYSIYHPEGHPLSKCGPMGDDV*RVCCLH
Trigger: GTGGAGGCAGCAGACTCGGCACACATCGTCGCCCAT...TGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp CTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTTCAGCTACATCATGGTaGTCGTGTCTCCCTGAAGCG +
Preference number: 4 (lower is better)
Translates to: LGGGDLYSTLNDSAQECPSATSW*SCLPEA
Trigger: CGCTTCAGGGAGACACGAGCACCATGATGTAGCTGA...AGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp TGGGCAAGGAAGATCTTTTACAACTCGGGTTTCAAAGGAACTTGTCCTTTATGCCCACTGTGGTTCCCCTaGGCCAGGTCTGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: WARKIFYNSGFKGTCPLCPLWFP*ARSAPP
Trigger: GGGAGGAGCAGACCTGGCGCAGGGGAACCACAGTGG...GCATAAAGGACAAGTTCCTTTGAAACCCGAGTTGTAAAAGATCTTCCTTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480371.1
CDS-3UTR GCA 90 bp ATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCAGAGTCCTTTTGTCCTaGGGTCCATATAAGAGGGTC +
Preference number: 4 (lower is better)
Translates to: ITLKGIHCQNVAHGRLMVRVLLS*GPYKRV
Trigger: GACCCTCTTATATGGACCGCAGGACAAAAGGACTCT...GACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp TCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGGGCCAATTGGCTTTTGATGCCTaGCTTGGCTTCGAAGCAACC +
Preference number: 4 (lower is better)
Translates to: SKCGPREAYGLTVACWGQLAFDA*LGFEAT
Trigger: GGTTGCTTCGAAGCCAAGGCAGGCATCAAAAGCCAA...TTGGCCCCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp CTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGGGTGTCCTGAGGGATaGTGGTGCAGAAGGCCACTT +
Preference number: 4 (lower is better)
Translates to: LYSIYHPEGHPLSKCGPRGCPEG*WCRRPL
Trigger: AAGTGGCCTTCTGCACCAGCATCCCTCAGGACACCC...CCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp AGAAGTTTTTCAGCCACAGTAGTGCTGATGGGTAAAAATTCTTGTTGGCAAGAAGTGGGGGCCTCAGTCTaGTGTTGTGCCGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: RSFSATVVLMGKNSCWQEVGASV*CCAGPG
Trigger: GCCCGGCCCGGCACAACAGCAGACTGAGGCCCCCAC...TTCTTGCCAACAAGAATTTTTACCCATCAGCACTACTGTGGCTGAAAAACTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp TGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCTTCTAACTCTGAGGCAGGCTaGACTTTGAAAACACATGCT +
Preference number: 4 (lower is better)
Translates to: WSVGSAVTLLRKTMVPASNSEAG*TLKTHA
Trigger: AGCATGTGTTTTCAAAGTGCAGCCTGCCTCAGAGTT...AGAAGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp TCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGGGCCAACTTGGCAGCGTGATTTaGCCTCTGGTTCCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: SKCGPREAYGLTVACWGQLGSVI*PLVPAL
Trigger: TAAAGCAGGAACCAGAGGGCAAATCACGCTGCCAAG...TTGGCCCCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
CDS-3UTR CCA 90 bp CGTGGAGGAAGGCACTCAAAGCTTCCTGTTCGACTTTGCCATCCTCACACGACTTCTTCTTGCCAGCCGTaGGTTCAGCTTTCTAGGTCT +
Preference number: 4 (lower is better)
Translates to: RGGRHSKLPVRLCHPHTTSSCQP*VQLSRS
Trigger: AGACCTAGAAAGCTGAACCCACGGCTGGCAAGAAGA...AGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGCTTTGAGTGCCTTCCTCCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp TGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTTGAAGCTTCATCTAGGTGGTTaGATATGTGGGTTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: CTSRCRADSCTGRTELLKLHLGG*ICGFPV
Trigger: CACAGGAAACCCACATATCCAACCACCTAGATGAAG...CTTCAACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp GGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGCAACGCACAAGCTCATaGACGGCCTGTTTGTACTCA +
Preference number: 4 (lower is better)
Translates to: GGGDLYSTLNDSAQECPRQRTSS*TACLYS
Trigger: TGAGTACAAACAGGCCGTCCATGAGCTTGTGCGTTG...CCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp AGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTCAACGCACAAGCTCATaGACGGCCTGTTTGTACTCA +
Preference number: 4 (lower is better)
Translates to: SIYHPEGHPLSKCGPREAQRTSS*TACLYS
Trigger: TGAGTACAAACAGGCCGTCCATGAGCTTGTGCGTTG...AGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp TGGGTGGCCAGAGTCCTTTTGTCCTGCGGTCCATATAAGAGGGTCTGGATCTGGTATAGGGAGGCACAATaGAGTTGGCGAGGATTTGTC +
Preference number: 4 (lower is better)
Translates to: WVARVLLSCGPYKRVWIWYREAQ*SWRGFV
Trigger: GACAAATCCTCGCCAACTCCATTGTGCCTCCCTATA...CCAGATCCAGACCCTCTTATATGGACCGCAGGACAAAAGGACTCTGGCCACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR CCA 90 bp CAGGGGGCTGAAGACTGCTGTGTACACGATAGTGTGCCAACTCAGGAAGCAGCTTATAGGGAGGCACAATaGAGTTGGCGAGGATTTGTC +
Preference number: 4 (lower is better)
Translates to: QGAEDCCVHDSVPTQEAAYREAQ*SWRGFV
Trigger: GACAAATCCTCGCCAACTCCATTGTGCCTCCCTATA...AGCTGCTTCCTGAGTTGGCACACTATCGTGTACACAGCAGTCTTCAGCCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp CCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCAGCTCTGCCCATGGTATaGAAAAGCTCAATGGAAAAC +
Preference number: 4 (lower is better)
Translates to: PHLCKELCVQADAGLTPAALPMV*KSSMEN
Trigger: GTTTTCCATTGAGCTTTTCCATACCATGGGCAGAGC...TGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp GGAAGCTGGGAAGTCTCAAGGTGCCAACAGTTTCATTTCCTGGTGAGGGCTCTCTTGATGGATACATCGTaGAGTCCCAGGGCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: GSWEVSRCQQFHFLVRALLMDTS*SPRACS
Trigger: AGAGCAAGCCCTGGGACTCCACGATGTATCCATCAA...GAGAGCCCTCACCAGGAAATGAAACTGTTGGCACCTTGAGACTTCCCAGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp CTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTTGCAGAAGGCCACTTTaGCTTTTGATGCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: LTPHLCKELCVQADAGLTCRRPL*LLMPAL
Trigger: CAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCA...AGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp CTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTGTTGGGGCCAACAGTTaGCCTTGGAAATCTGTATCC +
Preference number: 4 (lower is better)
Translates to: LTPHLCKELCVQADAGLTVGANS*PWKSVS
Trigger: GGATACAGATTTCCAAGGCCAACTGTTGGCCCCAAC...AGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp CCCTGTCGTGGCTCTACTGAGTTTATTTTCCCCATCAATACTGGAGGTGGTGCCTCCACTGTCAAAATGTaGCCCACGGGAGGCTTATGG +
Preference number: 4 (lower is better)
Translates to: PCRGSTEFIFPINTGGGASTVKM*PTGGLW
Trigger: CCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGA...GGCACCACCTCCAGTATTGATGGGGAAAATAAACTCAGTAGAGCCACGACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp TGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACCTGCACCCCTACCCCTaGGTGTTCCATCCACCTCGA +
Preference number: 4 (lower is better)
Translates to: CFIAYITLKGIHCQNVAHLHPYP*VFHPPR
Trigger: TCGAGGTGGATGGAACACCCAGGGGTAGGGGTGCAG...GTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp GGAAGCTGGGAAGTCTCAAGGTGCCAACAGTTTCATTTCCTGGTGAGGGCTCTCACCTACTCAGTCAGTTaGTACTGTTCCTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GSWEVSRCQQFHFLVRALTYSVS*YCSFCQ
Trigger: CTGGCAGAAGGAACAGTATCAACTGACTGAGTAGGT...GAGAGCCCTCACCAGGAAATGAAACTGTTGGCACCTTGAGACTTCCCAGCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp TGTCCTGAGGGATGCTGGTGCAGAAGGCCACTTTGGCTTTTGATGCCTGCCTTGTGGAATAGTGCTGTCTaGAGCAGCTTGTTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: CPEGCWCRRPLWLLMPALWNSAV*SSLFWN
Trigger: GTTCCAAAACAAGCTGCTTCAGACAGCACTATTCCA...CAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCACCAGCATCCCTCAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR TCA 90 bp GGGCTGAAGACTGCTGTGTACACGATAGTGTGCCAACTCAGGAAGCAGCTCCAGTGGAATAGTGCTGTCTaGAGCAGCTTGTTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: GLKTAVYTIVCQLRKQLQWNSAV*SSLFWN
Trigger: GTTCCAAAACAAGCTGCTTCAGACAGCACTATTCCA...CTGGAGCTGCTTCCTGAGTTGGCACACTATCGTGTACACAGCAGTCTTCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp AGCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCGCTTCCTTAAATTTTTaGAGGGAGAGTAAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SMVCGVSCHAPEEDNGPCASLNF*RESKAL
Trigger: CAGAGCTTTACTCTCCCTTCAAAAATTTAAGGAAGC...GCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp GAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACGTGCAAATGATAATCTaGTCCGTGCTTCAATTTCTA +
Preference number: 4 (lower is better)
Translates to: ELCVQADAGLTPAQGALNVQMII*SVLQFL
Trigger: TAGAAATTGAAGCACGGATCAGATTATCATTTGCAC...GTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR TCA 90 bp GCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCTGGACAAAGCTTCTTTTaGCTTCTTCTGACCTTGATA +
Preference number: 4 (lower is better)
Translates to: AWSVGSAVTLLRKTMVPAGQSFF*LLLTLI
Trigger: TATCAAGGTCAGAAGAAGTCAAAAGAAGCTTTGTCC...AGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp CTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCATCTGCTGCCTCCACTTaGGAGGGGCTTCTACTCAGG +
Preference number: 4 (lower is better)
Translates to: LLYSIYHPEGHPLSKCGPSAAST*EGLLLR
Trigger: CCTGAGTAGAAGCCCCTCTCAAGTGGAGGCAGCAGA...TGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR TCA 90 bp GTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGGGCCATTTTCTAGGCGGAGGTaGTTTGTACAGCACCCTAAA +
Preference number: 4 (lower is better)
Translates to: VKMWPTGGLWSHCCMLGPFSRRR*FVQHPK
Trigger: TTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAA...TGGCCCCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp GAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGGAAATCTGTATCCTaGCTGTTGAATTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: ELCVQADAGLTPAQGALNWKSVS*LLNSIF
Trigger: GAAAATGGAATTCAACAGTCAGGATACAGATTTCCA...GTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp CATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTCTGCACAGGGCGCACTaGACTGTTGAAGAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: HPLSKCGPREAYGLTVACLHRAH*TVEEKF
Trigger: AAACTTCTCTTCAACAGTTCAGTGCGCCCTGTGCAG...ACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp TTGGAAATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGAAGCAGATGCCGGGCTaGCTCCTGCACAGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: LEICILTVEFHFLGGGDLKQMPG*LLHRAH
Trigger: GTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTT...CAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGATTTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp GTGATAGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAAGCAGATGCCGGGCTaGCTCCTGCACAGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: VIENCFIAYITLKGIHCQKQMPG*LLHRAH
Trigger: GTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTT...TTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCTATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp AGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCTTTGAAAACACATGCTaGCAGCAGCGTGTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: RASTVKMWPTGGLWSHCCFENTC*QQRVQV
Trigger: AACCTGAACACGCTGCTGTCAGCATGTGTTTTCAAA...GCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp ATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGAGGCAGGCTGCACTTTaGAAACACATGCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: IAYITLKGIHCQNVAHGRRQAAL*KHMLTA
Trigger: TGCTGTCAGCATGTGTTTTCAAAGTGCAGCCTGCCT...CCTCCCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp CATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTAGGCAGGCTGCACTTTaGAAACACATGCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: HPLSKCGPREAYGLTVACRQAAL*KHMLTA
Trigger: TGCTGTCAGCATGTGTTTTCAAAGTGCAGCCTGCCT...ACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp CTTCCTGAAGTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTACTGGATCTCCTCGTTaGCATCGTGGAGGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: LPEVHCPDLTPHLCKELCTGSPR*HRGGRH
Trigger: GTGCCTTCCTCCACGATGTCAACGAGGAGATCCAGT...ACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAACTTCAGGAAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp GGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGCTTTTTCAGCTGTCACGCTCCTaGGGAAGACAATGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GDLYSTLNDSAQECPRLFQLSRS*GRQWSL
Trigger: CAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTG...AAAAAGCCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp TGGGCTCTTTCTCAAACCCCTTTTCAGGCTCCGAAGAACTCTGAGGCAGGCTGCGCATGTTGTTTTGCTTaGAGTGACAGTCCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: WALSQTPFQAPKNSEAGCACCFA*SDSPFS
Trigger: GCTGAAAGGACTGTCACTGCAAGCAAAACAACATGC...GCAGCCTGCCTCAGAGTTCTTCGGAGCCTGAAAAGGGGTTTGAGAAAGAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp TGGATCTCCTCGTTGACATCGTGGAGGAAGGCACTCAAAGCTTCCTGTTCGACTTGGAGTCCCAGGGCTTaGTCTACACCTGCTAATTCT +
Preference number: 4 (lower is better)
Translates to: WISSLTSWRKALKASCSTWSPRA*STPANS
Trigger: AGAATTAGCAGGTGTAGAGCAAGCCCTGGGACTCCA...AGTCGAACAGGAAGCTTTGAGTGCCTTCCTCCACGATGTCAACGAGGAGATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp CCCTGTCGTGGCTCTACTGAGTTTATTTTCCCCATCAATACTGGAGGTGGTGCCTGGAGTCCCAGGGCTTaGTCTACACCTGCTAATTCT +
Preference number: 4 (lower is better)
Translates to: PCRGSTEFIFPINTGGGAWSPRA*STPANS
Trigger: AGAATTAGCAGGTGTAGAGCAAGCCCTGGGACTCCA...GGCACCACCTCCAGTATTGATGGGGAAAATAAACTCAGTAGAGCCACGACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp ATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGTGGAGTCCCAGGGCTTaGTCTACACCTGCTAATTCT +
Preference number: 4 (lower is better)
Translates to: IAYITLKGIHCQNVAHGRWSPRA*STPANS
Trigger: AGAATTAGCAGGTGTAGAGCAAGCCCTGGGACTCCA...CCTCCCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp CAGGGGGCTGAAGACTGCTGTGTACACGATAGTGTGCCAACTCAGGAAGCAGCTCAGGATGATAAGATGTaGCTGGAGGAAGTGGTTGAT +
Preference number: 4 (lower is better)
Translates to: QGAEDCCVHDSVPTQEAAQDDKM*LEEVVD
Trigger: ATCAACCACTTCCTCCAGGCACATCTTATCATCCTG...AGCTGCTTCCTGAGTTGGCACACTATCGTGTACACAGCAGTCTTCAGCCCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp CTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCAGATGTGTGCCGAGTCTaGTGCCTCCACTTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LLYSIYHPEGHPLSKCGPDVCRV*CLHLRG
Trigger: CCCTCTCAAGTGGAGGCAGCAGACTCGGCACACATC...TGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp ATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCACTGAAATCGCCAAATaGTTCCACTTTGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: ITLKGIHCQNVAHGRLMVTEIAK*FHFGFQ
Trigger: CTGGAAGCCAAAGTGGAAGCATTTGGCGATTTCAGT...GACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp CATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAAGAGCCGGTATGTCTCTaGCACCTCGGGACTGAAATC +
Preference number: 4 (lower is better)
Translates to: HFLGGGDLYSTLNDSAQEEPVCL*HLGTEI
Trigger: GATTTCAGTCCCGAGGTGGCAGAGACATACCGGCTC...TTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp CTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTAGAGTCCTTTTGTCCTaGGGTCCATATAAGAGGGTC +
Preference number: 4 (lower is better)
Translates to: LTPHLCKELCVQADAGLTRVLLS*GPYKRV
Trigger: GACCCTCTTATATGGACCGCAGGACAAAAGGACTCT...AGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp ATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGTTGGCTTTTGATGCCTaGCTTGGCTTCGAAGCAACC +
Preference number: 4 (lower is better)
Translates to: IAYITLKGIHCQNVAHGRLAFDA*LGFEAT
Trigger: GGTTGCTTCGAAGCCAAGGCAGGCATCAAAAGCCAA...CCTCCCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp TCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGAGTGTGTACAAGCAGATaGCGGGCTGACTCCTGCACA +
Preference number: 4 (lower is better)
Translates to: SLSRSNSTPMQGAVCTSRVCTSR*RADSCT
Trigger: TGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACAC...TCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp CATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAACCCTGTGCTGCAATCTaGTGTCATAGCACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: HFLGGGDLYSTLNDSAQEPCAAI*CHSTSL
Trigger: CAGGCTGGTGCTATGACAGCAGATTGCAGCACAGGG...TTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp GTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGGGCCATGGGAAGTCTCAAGGTaGCAACAGTTTCATTTCCTG +
Preference number: 4 (lower is better)
Translates to: VKMWPTGGLWSHCCMLGPWEVSR*QQFHFL
Trigger: CAGGAAATGAAACTGTTGGCACCTTGAGACTTCCCA...TGGCCCCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp CTGGTGCAGAAGGCCACTTTGGCTTTTGATGCCTGCCTTGGCTTCGAAGCAACCCTTCATCTAGGTGGTTaGATATGTGGGTTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: LVQKATLAFDACLGFEATLHLGG*ICGFPV
Trigger: CACAGGAAACCCACATATCCAACCACCTAGATGAAG...GGTTGCTTCGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR CCA 90 bp ATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCCTTCATCTAGGTGGTTaGATATGTGGGTTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: ITLKGIHCQNVAHGRLMVLHLGG*ICGFPV
Trigger: CACAGGAAACCCACATATCCAACCACCTAGATGAAG...GACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp TGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTTGAAGACAACTTCATCTAGGTaGTTGGATATGTGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: CTSRCRADSCTGRTELLKTTSSR*LDMWVS
Trigger: GGAAACCCACATATCCAACCACCTAGATGAAGTTGT...CTTCAACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp GAGGAAGGCACTCAAAGCTTCCTGTTCGACTTTGCCATCCTCACACGACTATGGGAGGCACAATGGAGTTaGCGAGGATTTGTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: EEGTQSFLFDFAILTRLWEAQWS*RGFVWL
Trigger: AAGCCAGACAAATCCTCGCCAACTCCATTGTGCCTC...CCATAGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGCTTTGAGTGCCTTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp CCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGTATAGGGAGGCACAATaGAGTTGGCGAGGATTTGTC +
Preference number: 4 (lower is better)
Translates to: PLSKCGPREAYGLTVACWYREAQ*SWRGFV
Trigger: GACAAATCCTCGCCAACTCCATTGTGCCTCCCTATA...CCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp TGTCCTGAGGGATGCTGGTGCAGAAGGCCACTTTGGCTTTTGATGCCTGCCTTGGTAAAGCTCTGCCCATaGTATGGAAAAGCTCAATGG +
Preference number: 4 (lower is better)
Translates to: CPEGCWCRRPLWLLMPALVKLCP*YGKAQW
Trigger: CCATTGAGCTTTTCCATACCATGGGCAGAGCTTTAC...CAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCACCAGCATCCCTCAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR CCA 90 bp GTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTTGCTAATTCTCTCAATATaGGTACACACTCACGACTTG +
Preference number: 4 (lower is better)
Translates to: VCTSRCRADSCTGRTELLLILSI*VHTHDL
Trigger: CAAGTCGTGAGTGTGTACCCATATTGAGAGAATTAG...CAACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp CCCTGTCGTGGCTCTACTGAGTTTATTTTCCCCATCAATACTGGAGGTGGTGCCTTGATGGATACATCGTaGAGTCCCAGGGCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: PCRGSTEFIFPINTGGGALMDTS*SPRACS
Trigger: AGAGCAAGCCCTGGGACTCCACGATGTATCCATCAA...GGCACCACCTCCAGTATTGATGGGGAAAATAAACTCAGTAGAGCCACGACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp CCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCAATGATAAGATGTGCCTaGAGGAAGTGGTTGATGGAT +
Preference number: 4 (lower is better)
Translates to: PHLCKELCVQADAGLTPAMIRCA*RKWLMD
Trigger: ATCCATCAACCACTTCCTCCAGGCACATCTTATCAT...TGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp GGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGCAAATGCTTCCACTTTaGCTTCCAGGGACTCTCTCA +
Preference number: 4 (lower is better)
Translates to: GGGDLYSTLNDSAQECPRQMLPL*LPGTLS
Trigger: TGAGAGAGTCCCTGGAAGCCAAAGTGGAAGCATTTG...CCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CCA 90 bp TCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGGGCCAACAAATGCTTCCACTTTaGCTTCCAGGGACTCTCTCA +
Preference number: 4 (lower is better)
Translates to: SKCGPREAYGLTVACWGQQMLPL*LPGTLS
Trigger: TGAGAGAGTCCCTGGAAGCCAAAGTGGAAGCATTTG...TTGGCCCCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CCA 90 bp TTGGAAATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTTGCGGGCCCCACTGTaGTTCCCCTGCGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LEICILTVEFHFLGGGDLLRAPL*FPCARS
Trigger: AGACCTGGCGCAGGGGAACCACAGTGGGGCCCGCAA...CAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGATTTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CCA 90 bp GAAGTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAATGCCCATGGCCTGCTaGGTGGCCAGAGTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: EVHCPDLTPHLCKELCVQMPMAC*VARVLL
Trigger: CAAAAGGACTCTGGCCACCCAGCAGGCCATGGGCAT...TTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp CTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAAATTGGACAGCATGCCCATaGCCTGCTGGGTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LTVEFHFLGGGDLYSTLNWTACP*PAGWPE
Trigger: CTCTGGCCACCCAGCAGGCCATGGGCATGCTGTCCA...ATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp ATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTCCCACGGGAGGCTTATaGTCTCACTGTTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: IHCQNVAHGRLMVSLLHVPTGGL*SHCCML
Trigger: CAACATGCAACAGTGAGACCATAAGCCTCCCGTGGG...AACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CCA 90 bp CTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTTGTGTCCTCACATGGTaGAGAGAGAGATCATCTCTC +
Preference number: 4 (lower is better)
Translates to: LTPHLCKELCVQADAGLTCVLTW*RERSSL
Trigger: GAGAGATGATCTCTCTCTCCACCATGTGAGGACACA...AGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp CGTGGAGGAAGGCACTCAAAGCTTCCTGTTCGACTTTGCCATCCTCACACGACTTTCAAAAACTCGGCATaGACTCTCAGTTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RGGRHSKLPVRLCHPHTTFKNSA*TLSSGC
Trigger: GCAGCCTGAACTGAGAGTCCATGCCGAGTTTTTGAA...AGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGCTTTGAGTGCCTTCCTCCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp ACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTAAGAGGGTCTGGATCTaGAGACACTTCTTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: TPHLCKELCVQADAGLTPKRVWI*RHFFSF
Trigger: GAAACTGAAGAAGTGTCTCCAGATCCAGACCCTCTT...AGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394132.7
ENST00000394135.7
ENST00000558663.5
CDS-3UTR CCA 90 bp AGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGCTTTTTCAGGGTGGGGGCCCATATAAGAGGGTCTaGATCTGGAGACACTTCTTC +
Preference number: 4 (lower is better)
Translates to: STLNDSAQECPRLFQGGGPYKRV*IWRHFF
Trigger: GAAGAAGTGTCTCCAGATCCAGACCCTCTTATATGG...GCCCCCACCCTGAAAAAGCCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000394132.7
ENST00000394135.7
ENST00000558663.5
CDS-3UTR TCA 90 bp GAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCTGCCACCTCGGGACTaGAATCGCCAAATGCTTCCA +
Preference number: 4 (lower is better)
Translates to: EFHFLGGGDLYSTLNDSALPPRD*NRQMLP
Trigger: TGGAAGCATTTGGCGATTTCAGTCCCGAGGTGGCAG...GGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp TGTCGTGGCTCTACTGAGTTTATTTTCCCCATCAATACTGGAGGTGGTGCCCTGCTATGGAAGTGTCGCTaGGAGCAGGAAACTAAGGTC +
Preference number: 4 (lower is better)
Translates to: CRGSTEFIFPINTGGGALLWKCR*EQETKV
Trigger: GACCTTAGTTTCCTGCTCTCAGCGACACTTCCATAG...CAGGGCACCACCTCCAGTATTGATGGGGAAAATAAACTCAGTAGAGCCACGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR TCA 90 bp GAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCGGCCACTTTGGCTTTTaGTGCCTGCCTTGGCTTCGA +
Preference number: 4 (lower is better)
Translates to: EFHFLGGGDLYSTLNDSAGHFGF*CLPWLR
Trigger: TCGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCC...GGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp AGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTCTGTATCCTGACTGTTaGATTCCATTTTCTAGGCGG +
Preference number: 4 (lower is better)
Translates to: SIYHPEGHPLSKCGPREALYPDC*IPFSRR
Trigger: CCGCCTAGAAAATGGAATTCAACAGTCAGGATACAG...AGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp AGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTAAGCAGATGCCGGGCTaGCTCCTGCACAGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: RKLLYSIYHPEGHPLSKCKQMPG*LLHRAH
Trigger: GTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTT...ACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp CTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTTTTGAAAACACATGCTaGCAGCAGCGTGTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: LTPHLCKELCVQADAGLTFENTC*QQRVQV
Trigger: AACCTGAACACGCTGCTGTCAGCATGTGTTTTCAAA...AGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp TGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCCATTCACCCCTTAGCTaGCTCCACCCATGTCAACTA +
Preference number: 4 (lower is better)
Translates to: CPDLTPHLCKELCVQADAHSPLS*LHPCQL
Trigger: TAGTTGACATGGGTGGAGTCAGCTAAGGGGTGAATG...GGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp CCCTCCTACTGGGCTCTTTCTCAAACCCCTTTTCAGGCTCCGAAGAACTCTGAGCTGATAATCTGGGCATaGTGCTTTCAAACTTCACCC +
Preference number: 4 (lower is better)
Translates to: PSYWALSQTPFQAPKNSELIIWA*CFQTSP
Trigger: GGGTGAAGTTTGAAAGCATCATGCCCAGATTATCAG...CTCAGAGTTCTTCGGAGCCTGAAAAGGGGTTTGAGAAAGAGCCCAGTAGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394132.7
CDS-3UTR GCA 90 bp CTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAAATATGGGCGACGATGTGTaGCGAGTCTGCTGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: LTVEFHFLGGGDLYSTLNMGDDV*RVCCLH
Trigger: GTGGAGGCAGCAGACTCGGCACACATCGTCGCCCAT...ATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp CTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACCTGAGGGATGCTGGTaGAGAAGGCCACTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: LLYSIYHPEGHPLSKCGPPEGCW*RRPLWL
Trigger: AAGCCAAAGTGGCCTTCTGCACCAGCATCCCTCAGG...TGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp GATAGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAACTCAGTCTGCTGTTGTaGCGGGCCGGGCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: DRKLLYSIYHPEGHPLSKLSLLL*RAGPSP
Trigger: TGGGGAAGGCCCGGCCCGGCACAACAGCAGACTGAG...TTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp TCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGGGCCAAAACTCTGAGGCAGGCTaGACTTTGAAAACACATGCT +
Preference number: 4 (lower is better)
Translates to: SKCGPREAYGLTVACWGQNSEAG*TLKTHA
Trigger: AGCATGTGTTTTCAAAGTGCAGCCTGCCTCAGAGTT...TTGGCCCCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp GTGATAGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAGGTGTGTCGGCCTCCTaGCCCTCCTACTGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: VIENCFIAYITLKGIHCQGVSAS*PSYWAL
Trigger: AAGAGCCCAGTAGGAGGGGCAGGAGGCCGACACACC...TTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCTATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp CTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAAATGGGAAGGGACATCACTaGCCACACCTGCACCCCTAC +
Preference number: 4 (lower is better)
Translates to: LTVEFHFLGGGDLYSTLNGKGHH*PHLHPY
Trigger: GTAGGGGTGCAGGTGTGGGCAGTGATGTCCCTTCCC...ATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp TCCTTTTGTCCTGCGGTCCATATAAGAGGGTCTGGATCTGGAGACACTGTAGAAGAAGACAATGGTCCCTaGTTCTCTCCACCCTGTCGT +
Preference number: 4 (lower is better)
Translates to: SFCPAVHIRGSGSGDTVEEDNGP*FSPPCR
Trigger: ACGACAGGGTGGAGAGAAGCAGGGACCATTGTCTTC...TTCTACAGTGTCTCCAGATCCAGACCCTCTTATATGGACCGCAGGACAAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR GCA 90 bp GTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCACCAGTTTACCCAGTCTaGTGGAGAGGCTCACCGTTT +
Preference number: 4 (lower is better)
Translates to: VHCPDLTPHLCKELCVQAPVYPV*WRGSPF
Trigger: AAACGGTGAGCCTCTCCAGCAGACTGGGTAAACTGG...TGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394132.7
ENST00000394135.7
CDS-3UTR GCA 90 bp GGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGTGTCGTAAAATCCCTTaGCAGTTTACCCAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: GGGDLYSTLNDSAQECPRCRKIP*QFTQSA
Trigger: AGCAGACTGGGTAAACTGGCAAGGGATTTTACGACA...CCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394132.7
ENST00000394135.7
CDS-3UTR CCA 90 bp AGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTAGGTGGTTGGATATGTaGGTTTCCTGTGATTCTTGC +
Preference number: 4 (lower is better)
Translates to: SIYHPEGHPLSKCGPREARWLDM*VSCDSC
Trigger: GCAAGAATCACAGGAAACCCACATATCCAACCACCT...AGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp CCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACTAATTCTCTCAATATaGGTACACACTCACGACTTG +
Preference number: 4 (lower is better)
Translates to: PHLCKELCVQADAGLTPALILSI*VHTHDL
Trigger: CAAGTCGTGAGTGTGTACCCATATTGAGAGAATTAG...TGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp AGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGATAAGATGTGCCTaGAGGAAGTGGTTGATGGAT +
Preference number: 4 (lower is better)
Translates to: RASTVKMWPTGGLWSHCCMIRCA*RKWLMD
Trigger: ATCCATCAACCACTTCCTCCAGGCACATCTTATCAT...GCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp CTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTCAAATGCTTCCACTTTaGCTTCCAGGGACTCTCTCA +
Preference number: 4 (lower is better)
Translates to: LGGGDLYSTLNDSAQECPQMLPL*LPGTLS
Trigger: TGAGAGAGTCCCTGGAAGCCAAAGTGGAAGCATTTG...AGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CCA 90 bp TGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCATGCCCATGGCCTGCTaGGTGGCCAGAGTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: CILTVEFHFLGGGDLYSTMPMAC*VARVLL
Trigger: CAAAAGGACTCTGGCCACCCAGCAGGCCATGGGCAT...GGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp TGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGTTGGGGCCAACAGTTaGCCTTGGAAATCTGTATCC +
Preference number: 4 (lower is better)
Translates to: CPDLTPHLCKELCVQADAVGANS*PWKSVS
Trigger: GGATACAGATTTCCAAGGCCAACTGTTGGCCCCAAC...GGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp CATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATCCACTGTCAAAATGTaGCCCACGGGAGGCTTATGG +
Preference number: 4 (lower is better)
Translates to: HFLGGGDLYSTLNDSAQESTVKM*PTGGLW
Trigger: CCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGA...TTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CCA 90 bp CCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGAAGAGGGTCTGGATCTaGAGACACTTCTTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: PLSKCGPREAYGLTVACWKRVWI*RHFFSF
Trigger: GAAACTGAAGAAGTGTCTCCAGATCCAGACCCTCTT...CCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394132.7
ENST00000394135.7
ENST00000558663.5
3UTR CAA 72 bp TTTCAGGCTCCGAAGAACTCTGAGGCAGGCTGCACTTaGAAAACACATGCTGACAGCAGCGTGTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: FQAPKNSEAGCT*KTHADSSVFRF
Trigger: AAACCTGAACACGCTGCTGTCAGCATGTGTTTTCAAAGTGCAGCCTGCCTCAGAGTTCTTCGGAGCCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp ACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCTTCCTTAAATTTTTaGAGGGAGAGTAAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: TPHLCKELCVQADAGLTPASLNF*RESKAL
Trigger: CAGAGCTTTACTCTCCCTTCAAAAATTTAAGGAAGC...AGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR TCA 90 bp GGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGCTTTTTCCTGGAGGAAGTGGTTaGTGGATACATCGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: GDLYSTLNDSAQECPRLFPGGSG*WIHRGV
Trigger: GACTCCACGATGTATCCATCAACCACTTCCTCCAGG...AAAAAGCCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR TCA 90 bp CCCTGTCGTGGCTCTACTGAGTTTATTTTCCCCATCAATACTGGAGGTGGTGCCCTGTATCCTGACTGTTaGATTCCATTTTCTAGGCGG +
Preference number: 4 (lower is better)
Translates to: PCRGSTEFIFPINTGGGALYPDC*IPFSRR
Trigger: CCGCCTAGAAAATGGAATTCAACAGTCAGGATACAG...GGCACCACCTCCAGTATTGATGGGGAAAATAAACTCAGTAGAGCCACGACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp TGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACTTTTTAGCACACTGCTaGTGTCCGACAGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: CFIAYITLKGIHCQNVAHFLAHC*CPTGLG
Trigger: ACCCAGGCCTGTCGGACATCAGCAGTGTGCTAAAAA...GTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp ATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCAGGATGATAAGATGTaGCTGGAGGAAGTGGTTGAT +
Preference number: 4 (lower is better)
Translates to: IAYITLKGIHCQNVAHGRQDDKM*LEEVVD
Trigger: ATCAACCACTTCCTCCAGGCACATCTTATCATCCTG...CCTCCCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp GAAATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACGTGTGCCGAGTCTGCTaGCTCCACTTGAGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: EICILTVEFHFLGGGDLYVCRVC*LHLRGA
Trigger: AGCCCCTCTCAAGTGGAGGCAGCAGACTCGGCACAC...GTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp TTGGAAATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGATGGGCGACGATGTGTaGCGAGTCTGCTGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: LEICILTVEFHFLGGGDLMGDDV*RVCCLH
Trigger: GTGGAGGCAGCAGACTCGGCACACATCGTCGCCCAT...CAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGATTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp GAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCTCAGCTACATCATGGTaGTCGTGTCTCCCTGAAGCG +
Preference number: 4 (lower is better)
Translates to: EFHFLGGGDLYSTLNDSASATSW*SCLPEA
Trigger: CGCTTCAGGGAGACACGAGCACCATGATGTAGCTGA...GGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp GAGGAAGGCACTCAAAGCTTCCTGTTCGACTTTGCCATCCTCACACGACTATGGACTGAAATCGCCAAATaGTTCCACTTTGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: EEGTQSFLFDFAILTRLWTEIAK*FHFGFQ
Trigger: CTGGAAGCCAAAGTGGAAGCATTTGGCGATTTCAGT...CCATAGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGCTTTGAGTGCCTTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp GTATGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTCCCCTGCGCCAGGTCTaGTCCTCCCAGGAGCCGGTA +
Preference number: 4 (lower is better)
Translates to: VCLRGLLCLLPKKYQVRSPLRQV*SSQEPV
Trigger: TACCGGCTCCTGGGAGGAGCAGACCTGGCGCAGGGG...AGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR GCA 90 bp ATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCGGGTGTCCTGAGGGATaGTGGTGCAGAAGGCCACTT +
Preference number: 4 (lower is better)
Translates to: ICILTVEFHFLGGGDLYSGCPEG*WCRRPL
Trigger: AAGTGGCCTTCTGCACCAGCATCCCTCAGGACACCC...GCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp GTGATAGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAGGGAAGGGACATCACTaGCCACACCTGCACCCCTAC +
Preference number: 4 (lower is better)
Translates to: VIENCFIAYITLKGIHCQGKGHH*PHLHPY
Trigger: GTAGGGGTGCAGGTGTGGGCAGTGATGTCCCTTCCC...TTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCTATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp CTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCAGAAGACAATGGTCCCTaGTTCTCTCCACCCTGTCGT +
Preference number: 4 (lower is better)
Translates to: LLYSIYHPEGHPLSKCGPEDNGP*FSPPCR
Trigger: ACGACAGGGTGGAGAGAAGCAGGGACCATTGTCTTC...TGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp CGTGGAGGAAGGCACTCAAAGCTTCCTGTTCGACTTTGCCATCCTCACACGACTTTGCCCTCTGGTTCCTaGTTTATCAGTTTGGTGATT +
Preference number: 4 (lower is better)
Translates to: RGGRHSKLPVRLCHPHTTLPSGS*FISLVI
Trigger: AATCACCAAACTGATAAAGCAGGAACCAGAGGGCAA...AGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGCTTTGAGTGCCTTCCTCCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp GGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGGGAACTTGTCCTTTATaGAAGTTATGGGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: GGGDLYSTLNDSAQECPRGTCPL*KLWEVS
Trigger: GCTGACTTCCCATAACTTGCATAAAGGACAAGTTCC...CCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480371.1
CDS-3UTR CCA 90 bp GTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCATCTTCTTGCCAGCCGTaGGTTCAGCTTTCTAGGTCT +
Preference number: 4 (lower is better)
Translates to: VHCPDLTPHLCKELCVQASSCQP*VQLSRS
Trigger: AGACCTAGAAAGCTGAACCCACGGCTGGCAAGAAGA...TGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp ATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGAGGTGGTTGGATATGTaGGTTTCCTGTGATTCTTGC +
Preference number: 4 (lower is better)
Translates to: IAYITLKGIHCQNVAHGRRWLDM*VSCDSC
Trigger: GCAAGAATCACAGGAAACCCACATATCCAACCACCT...CCTCCCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp CTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTCTTCATCTAGGTGGTTaGATATGTGGGTTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: LGGGDLYSTLNDSAQECPLHLGG*ICGFPV
Trigger: CACAGGAAACCCACATATCCAACCACCTAGATGAAG...AGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp CATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAAGAGGCACAATGGAGTTaGCGAGGATTTGTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: HFLGGGDLYSTLNDSAQEEAQWS*RGFVWL
Trigger: AAGCCAGACAAATCCTCGCCAACTCCATTGTGCCTC...TTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp TCGTTGACATCGTGGAGGAAGGCACTCAAAGCTTCCTGTTCGACTTTGCCATCCGCTCTGCCCATGGTATaGAAAAGCTCAATGGAAAAC +
Preference number: 4 (lower is better)
Translates to: SLTSWRKALKASCSTLPSALPMV*KSSMEN
Trigger: GTTTTCCATTGAGCTTTTCCATACCATGGGCAGAGC...GGATGGCAAAGTCGAACAGGAAGCTTTGAGTGCCTTCCTCCACGATGTCAACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp ATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGGTAAAGCTCTGCCCATaGTATGGAAAAGCTCAATGG +
Preference number: 4 (lower is better)
Translates to: IAYITLKGIHCQNVAHGRVKLCP*YGKAQW
Trigger: CCATTGAGCTTTTCCATACCATGGGCAGAGCTTTAC...CCTCCCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp CATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTGTAAAGCTCTGCCCATaGTATGGAAAAGCTCAATGG +
Preference number: 4 (lower is better)
Translates to: HPLSKCGPREAYGLTVACVKLCP*YGKAQW
Trigger: CCATTGAGCTTTTCCATACCATGGGCAGAGCTTTAC...ACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp ATGCTGGTGCAGAAGGCCACTTTGGCTTTTGATGCCTGCCTTGGCTTCGAAGCAATGATAAGATGTGCCTaGAGGAAGTGGTTGATGGAT +
Preference number: 4 (lower is better)
Translates to: MLVQKATLAFDACLGFEAMIRCA*RKWLMD
Trigger: ATCCATCAACCACTTCCTCCAGGCACATCTTATCAT...TGCTTCGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCACCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR CCA 90 bp GAAATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACGAAGCGACAGCAGCATaGGCGACGATGTGTGCCGAG +
Preference number: 4 (lower is better)
Translates to: EICILTVEFHFLGGGDLYEATAA*ATMCAE
Trigger: CTCGGCACACATCGTCGCCCATGCTGCTGTCGCTTC...GTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp TGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACCTTGCGGGCCCCACTGTaGTTCCCCTGCGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: CLRGLLCLLPKKYQVRSTLRAPL*FPCARS
Trigger: AGACCTGGCGCAGGGGAACCACAGTGGGGCCCGCAA...GGTAGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CCA 90 bp CATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGCAGAAGGCCACTTTaGCTTTTGATGCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: HFLGGGDLYSTLNDSAQECRRPL*LLMPAL
Trigger: CAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCA...TTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CCA 90 bp GGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGCTTTTTCCCACGGGAGGCTTATaGTCTCACTGTTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: GDLYSTLNDSAQECPRLFPTGGL*SHCCML
Trigger: CAACATGCAACAGTGAGACCATAAGCCTCCCGTGGG...AAAAAGCCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CCA 90 bp GAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCTCCACTGTCAAAATGTaGCCCACGGGAGGCTTATGG +
Preference number: 4 (lower is better)
Translates to: EFHFLGGGDLYSTLNDSASTVKM*PTGGLW
Trigger: CCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGA...GGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CCA 90 bp GAAGTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAACCTCGATCTGGCACTaGATCTCCTCGTTGACATCG +
Preference number: 4 (lower is better)
Translates to: EVHCPDLTPHLCKELCVQTSIWH*ISSLTS
Trigger: CGATGTCAACGAGGAGATCCAGTGCCAGATCGAGGT...TTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp AGTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCTTTCCCCATCAATACTaGAGGTGGTGCCCTGCACAA +
Preference number: 4 (lower is better)
Translates to: SSLSRSNSTPMQGAVCTSFPHQY*RWCPAQ
Trigger: TTGTGCAGGGCACCACCTCCAGTATTGATGGGGAAA...GCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp TTCTTACAGTTCTGGAAGCTGGGAAGTCTCAAGGTGCCAACAGTTTCATTTCCTGTGTACCAGCAAGCATaGTCTGTGGGGTCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: FLQFWKLGSLKVPTVSFPVYQQA*SVGSAV
Trigger: GACAGCTGACCCCACAGACCATGCTTGCTGGTACAC...AGGAAATGAAACTGTTGGCACCTTGAGACTTCCCAGCTTCCAGAACTGTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp TCATGTTATTCTCAATCCCTATTAGCCTCCTATAAGAAAGGACTTCCTGAAGTTCAGCACTCTGGGAGGTaGAGGCGGGAGGGTCACCTC +
Preference number: 4 (lower is better)
Translates to: SCYSQSLLASYKKGLPEVQHSGR*RREGHL
Trigger: GAGGTGACCCTCCCGCCTCCACCTCCCAGAGTGCTG...AACTTCAGGAAGTCCTTTCTTATAGGAGGCTAATAGGGATTGAGAATAACATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394132.7
CDS-3UTR CCA 90 bp CTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTTTGCAAACCAATCTTTaGGAGCCAGAGGTGGGAATT +
Preference number: 4 (lower is better)
Translates to: LGGGDLYSTLNDSAQECPLQTNL*EPEVGI
Trigger: AATTCCCACCTCTGGCTCCCAAAGATTGGTTTGCAA...AGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394135.7
ENST00000558663.5
CDS-3UTR CCA 90 bp ATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGTTGCAAACCAATCTTTaGGAGCCAGAGGTGGGAATT +
Preference number: 4 (lower is better)
Translates to: IAYITLKGIHCQNVAHGRLQTNL*EPEVGI
Trigger: AATTCCCACCTCTGGCTCCCAAAGATTGGTTTGCAA...CCTCCCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394135.7
ENST00000558663.5
CDS-3UTR TCA 90 bp TGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCTGGAATAGTGCTGTCTaGAGCAGCTTGTTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: CPDLTPHLCKELCVQADAWNSAV*SSLFWN
Trigger: GTTCCAAAACAAGCTGCTTCAGACAGCACTATTCCA...GGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR TCA 90 bp AGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGCTTTTTCAGGGTGGGGGCGTGCAAATGATAATCTaGTCCGTGCTTCAATTTCTA +
Preference number: 4 (lower is better)
Translates to: STLNDSAQECPRLFQGGGVQMII*SVLQFL
Trigger: TAGAAATTGAAGCACGGATCAGATTATCATTTGCAC...GCCCCCACCCTGAAAAAGCCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR TCA 90 bp TCAGCCACAGTAGTGCTGATGGGTAAAAATTCTTGTTGGCAAGAAAAACCACTTTCTGCTGCCTCCACTTaGGAGGGGCTTCTACTCAGG +
Preference number: 4 (lower is better)
Translates to: SATVVLMGKNSCWQEKPLSAAST*EGLLLR
Trigger: CCTGAGTAGAAGCCCCTCTCAAGTGGAGGCAGCAGA...AAGTGGTTTTTCTTGCCAACAAGAATTTTTACCCATCAGCACTACTGTGGCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR TCA 90 bp CTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACCACAGTGCTCGTGTCTCCCTaGAGCGACAGCAGCATGGGC +
Preference number: 4 (lower is better)
Translates to: LRGLLCLLPKKYQVRSTTVLVSP*SDSSMG
Trigger: GCCCATGCTGCTGTCGCTTCAGGGAGACACGAGCAC...TGTGGTAGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR TCA 90 bp CTGGGCAAGGAAGATCTTTTACAACTCGGGTTTCAAAGGAACTTGTCCTTTATGCTGCCACCTCGGGACTaGAATCGCCAAATGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LGKEDLLQLGFQRNLSFMLPPRD*NRQMLP
Trigger: TGGAAGCATTTGGCGATTTCAGTCCCGAGGTGGCAG...CATAAAGGACAAGTTCCTTTGAAACCCGAGTTGTAAAAGATCTTCCTTGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480371.1
CDS-3UTR TCA 90 bp CTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAAATGGCCACTTTGGCTTTTaGTGCCTGCCTTGGCTTCGA +
Preference number: 4 (lower is better)
Translates to: LTVEFHFLGGGDLYSTLNGHFGF*CLPWLR
Trigger: TCGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCC...ATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp ATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTTTTTCTAGGCGGAGGTaGTTTGTACAGCACCCTAAA +
Preference number: 4 (lower is better)
Translates to: IHCQNVAHGRLMVSLLHVFSRRR*FVQHPK
Trigger: TTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAA...AACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGAT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp CAGAAGGCCACTTTGGCTTTTGATGCCTGCCTTGGCTTCGAAGCAACCTTGGGGTGGAAATCTGTATCCTaGCTGTTGAATTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: QKATLAFDACLGFEATLGWKSVS*LLNSIF
Trigger: GAAAATGGAATTCAACAGTCAGGATACAGATTTCCA...CCCCAAGGTTGCTTCGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000459771.5
ENST00000480371.1
CDS-3UTR TCA 90 bp ATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCGTTGTCTTGGCAGCGTaGTTTGCCCTCTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: ICILTVEFHFLGGGDLYSVVLAA*FALWFL
Trigger: CAGGAACCAGAGGGCAAATCACGCTGCCAAGACAAC...GCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
CDS-3UTR GCA 90 bp CTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCAAAACCATCCTCTTCTTaGCAGCCGTGGGTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: LLYSIYHPEGHPLSKCGPKPSSS*QPWVQL
Trigger: AAGCTGAACCCACGGCTGGCAAGAAGAGGATGGTTT...TGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp TCCTTTTGTCCTGCGGTCCATATAAGAGGGTCTGGATCTGGAGACACTGTAGAAGCAAATTCTTGTCAGTaGTACGCAACGCACAAGCTC +
Preference number: 4 (lower is better)
Translates to: SFCPAVHIRGSGSGDTVEANSCQ*YATHKL
Trigger: GAGCTTGTGCGTTGCGTAGCACTGACAAGAATTTGC...TTCTACAGTGTCTCCAGATCCAGACCCTCTTATATGGACCGCAGGACAAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR GCA 90 bp CTTCCTGAAGTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGGGAGAGTAAAGCTCTaGCCATGGTATGGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: LPEVHCPDLTPHLCKELCGRVKL*PWYGKA
Trigger: AGCTTTTCCATACCATGGGCAGAGCTTTACTCTCCC...ACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAACTTCAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp GAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCTGGAGTCCCAGGGCTTaGTCTACACCTGCTAATTCT +
Preference number: 4 (lower is better)
Translates to: EFHFLGGGDLYSTLNDSAWSPRA*STPANS
Trigger: AGAATTAGCAGGTGTAGAGCAAGCCCTGGGACTCCA...GGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp GATAGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAAGTGTGCCGAGTCTGCTaGCTCCACTTGAGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: DRKLLYSIYHPEGHPLSKVCRVC*LHLRGA
Trigger: AGCCCCTCTCAAGTGGAGGCAGCAGACTCGGCACAC...TTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp TCCCTATTAGCCTCCTATAAGAAAGGACTTCCTGAAGTTCACTGTCCAGATCTAGAGCCGGTATGTCTCTaGCACCTCGGGACTGAAATC +
Preference number: 4 (lower is better)
Translates to: SLLASYKKGLPEVHCPDLEPVCL*HLGTEI
Trigger: GATTTCAGTCCCGAGGTGGCAGAGACATACCGGCTC...TAGATCTGGACAGTGAACTTCAGGAAGTCCTTTCTTATAGGAGGCTAATAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp GTATGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTCCACTGTGGTTCCCCTaGGCCAGGTCTGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: VCLRGLLCLLPKKYQVRSPLWFP*ARSAPP
Trigger: GGGAGGAGCAGACCTGGCGCAGGGGAACCACAGTGG...AGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR GCA 90 bp CTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGAGAGTCCTTTTGTCCTaGGGTCCATATAAGAGGGTC +
Preference number: 4 (lower is better)
Translates to: LYSIYHPEGHPLSKCGPRRVLLS*GPYKRV
Trigger: GACCCTCTTATATGGACCGCAGGACAAAAGGACTCT...CCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp AGTAGTGACATCTTACACGTTTTTAGCACACTGCTGATGTCCGACAGGCCTGGGAACTCTGAGGCAGGCTaGACTTTGAAAACACATGCT +
Preference number: 4 (lower is better)
Translates to: SSDILHVFSTLLMSDRPGNSEAG*TLKTHA
Trigger: AGCATGTGTTTTCAAAGTGCAGCCTGCCTCAGAGTT...CCCAGGCCTGTCGGACATCAGCAGTGTGCTAAAAACGTGTAAGATGTCACTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp TCATGTTATTCTCAATCCCTATTAGCCTCCTATAAGAAAGGACTTCCTGAAGTTTCACTCCCTTACACCTaGCTCCTGGGCCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SCYSQSLLASYKKGLPEVSLPYT*LLGPRP
Trigger: TGGCCTGGGGCCCAGGAGGCAGGTGTAAGGGAGTGA...AACTTCAGGAAGTCCTTTCTTATAGGAGGCTAATAGGGATTGAGAATAACATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp TCCTTTTGTCCTGCGGTCCATATAAGAGGGTCTGGATCTGGAGACACTGTAGAACTTCCTGTTCGACTTTaGCATCCTCACACGACTATG +
Preference number: 4 (lower is better)
Translates to: SFCPAVHIRGSGSGDTVELPVRL*HPHTTM
Trigger: CATAGTCGTGTGAGGATGGCAAAGTCGAACAGGAAG...TTCTACAGTGTCTCCAGATCCAGACCCTCTTATATGGACCGCAGGACAAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR GCA 90 bp TGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCTGGGAAGTCTCAAGGTaGCAACAGTTTCATTTCCTG +
Preference number: 4 (lower is better)
Translates to: CPDLTPHLCKELCVQADAWEVSR*QQFHFL
Trigger: CAGGAAATGAAACTGTTGGCACCTTGAGACTTCCCA...GGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp TGGGCTCTTTCTCAAACCCCTTTTCAGGCTCCGAAGAACTCTGAGGCAGGCTGCTGTAGTAGCTATAGCTaGGGCTTAAAATTTCATCAG +
Preference number: 4 (lower is better)
Translates to: WALSQTPFQAPKNSEAGCCSSYS*GLKFHQ
Trigger: CTGATGAAATTTTAAGCCCCAGCTATAGCTACTACA...GCAGCCTGCCTCAGAGTTCTTCGGAGCCTGAAAAGGGGTTTGAGAAAGAGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp GAAGTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAACAACGCACAAGCTCATaGACGGCCTGTTTGTACTCA +
Preference number: 4 (lower is better)
Translates to: EVHCPDLTPHLCKELCVQQRTSS*TACLYS
Trigger: TGAGTACAAACAGGCCGTCCATGAGCTTGTGCGTTG...TTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp ATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGTAAAGCTCTGCCCATaGTATGGAAAAGCTCAATGG +
Preference number: 4 (lower is better)
Translates to: IHCQNVAHGRLMVSLLHVVKLCP*YGKAQW
Trigger: CCATTGAGCTTTTCCATACCATGGGCAGAGCTTTAC...AACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp CTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCTAATTCTCTCAATATaGGTACACACTCACGACTTG +
Preference number: 4 (lower is better)
Translates to: LTPHLCKELCVQADAGLTLILSI*VHTHDL
Trigger: CAAGTCGTGAGTGTGTACCCATATTGAGAGAATTAG...AGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp TCGTTGACATCGTGGAGGAAGGCACTCAAAGCTTCCTGTTCGACTTTGCCATCCATGATAAGATGTGCCTaGAGGAAGTGGTTGATGGAT +
Preference number: 4 (lower is better)
Translates to: SLTSWRKALKASCSTLPSMIRCA*RKWLMD
Trigger: ATCCATCAACCACTTCCTCCAGGCACATCTTATCAT...GGATGGCAAAGTCGAACAGGAAGCTTTGAGTGCCTTCCTCCACGATGTCAACGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp AGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGAAGCGACAGCAGCATaGGCGACGATGTGTGCCGAG +
Preference number: 4 (lower is better)
Translates to: RKLLYSIYHPEGHPLSKCEATAA*ATMCAE
Trigger: CTCGGCACACATCGTCGCCCATGCTGCTGTCGCTTC...ACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp GATAGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAAGAAGCGACAGCAGCATaGGCGACGATGTGTGCCGAG +
Preference number: 4 (lower is better)
Translates to: DRKLLYSIYHPEGHPLSKEATAA*ATMCAE
Trigger: CTCGGCACACATCGTCGCCCATGCTGCTGTCGCTTC...TTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp CCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCAGGTAAAAATTCTTGTTaGCAAGAAAAACCACTTAGG +
Preference number: 4 (lower is better)
Translates to: PHLCKELCVQADAGLTPAGKNSC*QEKPLR
Trigger: CCTAAGTGGTTTTTCTTGCCAACAAGAATTTTTACC...TGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CCA 90 bp GAAATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACGGAAGCAGCTCCAGGTaGCATCCAGGTTTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: EICILTVEFHFLGGGDLYGSSSR*HPGLSC
Trigger: GCAGGACAAACCTGGATGCCACCTGGAGCTGCTTCC...GTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp CTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAAATGGTGCCCTGCACAAATaGCCCCAGGGTGGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: LTVEFHFLGGGDLYSTLNGALHK*PQGGFD
Trigger: ATCAAAACCACCCTGGGGCCATTTGTGCAGGGCACC...ATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp CTTCCTGAAGTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTTGTGTCCTCACATGGTaGAGAGAGAGATCATCTCTC +
Preference number: 4 (lower is better)
Translates to: LPEVHCPDLTPHLCKELCCVLTW*RERSSL
Trigger: GAGAGATGATCTCTCTCTCCACCATGTGAGGACACA...ACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAACTTCAGGAAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp GGAAGCTGGGAAGTCTCAAGGTGCCAACAGTTTCATTTCCTGGTGAGGGCTCTCTATTTCTTACAGTTCTaGAAGCTGGGAAGTCTCAAG +
Preference number: 4 (lower is better)
Translates to: GSWEVSRCQQFHFLVRALYFLQF*KLGSLK
Trigger: CTTGAGACTTCCCAGCTTCCAGAACTGTAAGAAATA...GAGAGCCCTCACCAGGAAATGAAACTGTTGGCACCTTGAGACTTCCCAGCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp CTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTTATTTCTTACAGTTCTaGAAGCTGGGAAGTCTCAAG +
Preference number: 4 (lower is better)
Translates to: LTPHLCKELCVQADAGLTYFLQF*KLGSLK
Trigger: CTTGAGACTTCCCAGCTTCCAGAACTGTAAGAAATA...AGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp GTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAAGCTTTCTAGGTCTCTaGATCACAACTGCCAATGAG +
Preference number: 4 (lower is better)
Translates to: VHCPDLTPHLCKELCVQASFLGL*ITTANE
Trigger: CTCATTGGCAGTTGTGATTCAGAGACCTAGAAAGCT...TGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp GAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCTTGTTTTGCTTGCAGTaGCAGTCCTTTCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: EFHFLGGGDLYSTLNDSALFCLQ*QSFQLE
Trigger: CTCCAGCTGAAAGGACTGTCACTGCAAGCAAAACAA...GGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR TCA 90 bp TTCTTACAGTTCTGGAAGCTGGGAAGTCTCAAGGTGCCAACAGTTTCATTTCCTCTATGGAAGTGTCGCTaGGAGCAGGAAACTAAGGTC +
Preference number: 4 (lower is better)
Translates to: FLQFWKLGSLKVPTVSFPLWKCR*EQETKV
Trigger: GACCTTAGTTTCCTGCTCTCAGCGACACTTCCATAG...AGGAAATGAAACTGTTGGCACCTTGAGACTTCCCAGCTTCCAGAACTGTAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR TCA 90 bp TCAGCCACAGTAGTGCTGATGGGTAAAAATTCTTGTTGGCAAGAAAAACCACTTGGCCACTTTGGCTTTTaGTGCCTGCCTTGGCTTCGA +
Preference number: 4 (lower is better)
Translates to: SATVVLMGKNSCWQEKPLGHFGF*CLPWLR
Trigger: TCGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCC...AAGTGGTTTTTCTTGCCAACAAGAATTTTTACCCATCAGCACTACTGTGGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp CTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTTGGAAATCTGTATCCTaGCTGTTGAATTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: LTPHLCKELCVQADAGLTWKSVS*LLNSIF
Trigger: GAAAATGGAATTCAACAGTCAGGATACAGATTTCCA...AGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR TCA 90 bp AGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTTGGAAATCTGTATCCTaGCTGTTGAATTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: SIYHPEGHPLSKCGPREAWKSVS*LLNSIF
Trigger: GAAAATGGAATTCAACAGTCAGGATACAGATTTCCA...AGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp TGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTGCACAGGGCGCACTaGACTGTTGAAGAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: CILTVEFHFLGGGDLYSTLHRAH*TVEEKF
Trigger: AAACTTCTCTTCAACAGTTCAGTGCGCCCTGTGCAG...GGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp TCAGCCACAGTAGTGCTGATGGGTAAAAATTCTTGTTGGCAAGAAAAACCACTTGGCTCCGAAGAACTCTaGGGCAGGCTGCACTTTGAA +
Preference number: 4 (lower is better)
Translates to: SATVVLMGKNSCWQEKPLGSEEL*GRLHFE
Trigger: TTCAAAGTGCAGCCTGCCTCAGAGTTCTTCGGAGCC...AAGTGGTTTTTCTTGCCAACAAGAATTTTTACCCATCAGCACTACTGTGGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp CTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTTCTCTGCTTTTCCTTTaGCACTCAATCACTCCTTTA +
Preference number: 4 (lower is better)
Translates to: LGGGDLYSTLNDSAQECPSLLFL*HSITPL
Trigger: TAAAGGAGTGATTGAGTGTCAAAGGAAAAGCAGAGA...AGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394132.7
ENST00000394135.7
CDS-3UTR TCA 90 bp CTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGCTGATAATCTGGGCATaGTGCTTTCAAACTTCACCC +
Preference number: 4 (lower is better)
Translates to: LYSIYHPEGHPLSKCGPRLIIWA*CFQTSP
Trigger: GGGTGAAGTTTGAAAGCATCATGCCCAGATTATCAG...CCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394132.7
ENST00000394135.7
CDS-3UTR TCA 90 bp CTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTGAACCAGCTTTCTCTTaGGATTCTTCTTCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LGGGDLYSTLNDSAQECPEPAFS*DSSSVS
Trigger: AGAAACTGAAGAAGAATCTCAAGAGAAAGCTGGTTC...AGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480371.1
CDS-3UTR GCA 90 bp TGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACCGTGTGCCGAGTCTGCTaGCTCCACTTGAGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: CLRGLLCLLPKKYQVRSTVCRVC*LHLRGA
Trigger: AGCCCCTCTCAAGTGGAGGCAGCAGACTCGGCACAC...GGTAGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR GCA 90 bp CTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACCACAATGGGCGACGATGTGTaGCGAGTCTGCTGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: LRGLLCLLPKKYQVRSTTMGDDV*RVCCLH
Trigger: GTGGAGGCAGCAGACTCGGCACACATCGTCGCCCAT...TGTGGTAGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR GCA 90 bp TCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGAACTGAAATCGCCAAATaGTTCCACTTTGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: SLSRSNSTPMQGAVCTSRTEIAK*FHFGFQ
Trigger: CTGGAAGCCAAAGTGGAAGCATTTGGCGATTTCAGT...TCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp CTTCCTGAAGTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTCTAACTCCACACCTATaGAAGGAGCTGTGTGTACAA +
Preference number: 4 (lower is better)
Translates to: LPEVHCPDLTPHLCKELCLTPHL*KELCVQ
Trigger: TTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAG...ACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAACTTCAGGAAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp GAAGTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAACTTCCTGTTCGACTTTaGCATCCTCACACGACTATG +
Preference number: 4 (lower is better)
Translates to: EVHCPDLTPHLCKELCVQLPVRL*HPHTTM
Trigger: CATAGTCGTGTGAGGATGGCAAAGTCGAACAGGAAG...TTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp CTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCATATAGGGAGGCACAATaGAGTTGGCGAGGATTTGTC +
Preference number: 4 (lower is better)
Translates to: LLYSIYHPEGHPLSKCGPYREAQ*SWRGFV
Trigger: GACAAATCCTCGCCAACTCCATTGTGCCTCCCTATA...TGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp CTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGTAAAGCTCTGCCCATaGTATGGAAAAGCTCAATGG +
Preference number: 4 (lower is better)
Translates to: LYSIYHPEGHPLSKCGPRVKLCP*YGKAQW
Trigger: CCATTGAGCTTTTCCATACCATGGGCAGAGCTTTAC...CCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp CTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTCTAATTCTCTCAATATaGGTACACACTCACGACTTG +
Preference number: 4 (lower is better)
Translates to: LGGGDLYSTLNDSAQECPLILSI*VHTHDL
Trigger: CAAGTCGTGAGTGTGTACCCATATTGAGAGAATTAG...AGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp ATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTATGCTCAGCTACATCATaGTGCTCGTGTCTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: ILTVEFHFLGGGDLYSTLCSATS*CSCLPE
Trigger: TTCAGGGAGACACGAGCACCATGATGTAGCTGAGCA...TAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp GATAGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAAATGCCCATGGCCTGCTaGGTGGCCAGAGTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: DRKLLYSIYHPEGHPLSKMPMAC*VARVLL
Trigger: CAAAAGGACTCTGGCCACCCAGCAGGCCATGGGCAT...TTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp TTGGAAATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTCCTGCCCCTCCTACTaGGCTCTTTCTCAAACCCCT +
Preference number: 4 (lower is better)
Translates to: LEICILTVEFHFLGGGDLSCPSY*ALSQTP
Trigger: AGGGGTTTGAGAAAGAGCCCAGTAGGAGGGGCAGGA...CAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGATTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp ATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTATCCTCGTTGACATCGTaGAGGAAGGCACTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: ILTVEFHFLGGGDLYSTLSSLTS*RKALKA
Trigger: AGCTTTGAGTGCCTTCCTCCACGATGTCAACGAGGA...TAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp TTGGAAATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGGGTGCCCTGCACAAATaGCCCCAGGGTGGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: LEICILTVEFHFLGGGDLGALHK*PQGGFD
Trigger: ATCAAAACCACCCTGGGGCCATTTGTGCAGGGCACC...CAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGATTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp CTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCATTCAAAAACTCGGCATaGACTCTCAGTTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LLYSIYHPEGHPLSKCGPFKNSA*TLSSGC
Trigger: GCAGCCTGAACTGAGAGTCCATGCCGAGTTTTTGAA...TGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp AGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGCTTTTTCAGGGTGGGGGCGGAATTTTCTTAAAGTaGTATCGTTGCCTGTTGATA +
Preference number: 4 (lower is better)
Translates to: STLNDSAQECPRLFQGGGGIFLK*YRCLLI
Trigger: TATCAACAGGCAACGATACCACTTTAAGAAAATTCC...GCCCCCACCCTGAAAAAGCCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394135.7
ENST00000558663.5
CDS-3UTR TCA 90 bp GGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGCTTTTTTGGAATAGTGCTGTCTaGAGCAGCTTGTTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: GDLYSTLNDSAQECPRLFWNSAV*SSLFWN
Trigger: GTTCCAAAACAAGCTGCTTCAGACAGCACTATTCCA...AAAAAGCCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR TCA 90 bp GAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCTTTTCTAGGCGGAGGTaGTTTGTACAGCACCCTAAA +
Preference number: 4 (lower is better)
Translates to: EFHFLGGGDLYSTLNDSAFSRRR*FVQHPK
Trigger: TTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAA...GGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp CTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCATTTTCTAGGCGGAGGTaGTTTGTACAGCACCCTAAA +
Preference number: 4 (lower is better)
Translates to: LLYSIYHPEGHPLSKCGPFSRRR*FVQHPK
Trigger: TTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAA...TGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp GAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCTGTATCCTGACTGTTaGATTCCATTTTCTAGGCGG +
Preference number: 4 (lower is better)
Translates to: EFHFLGGGDLYSTLNDSALYPDC*IPFSRR
Trigger: CCGCCTAGAAAATGGAATTCAACAGTCAGGATACAG...GGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp ACTGAACTGTTGAAGAGAAGTTTTTCAGCCACAGTAGTGCTGATGGGTAAAAATACTGGATCTCCTCGTTaGCATCGTGGAGGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: TELLKRSFSATVVLMGKNTGSPR*HRGGRH
Trigger: GTGCCTTCCTCCACGATGTCAACGAGGAGATCCAGT...ATTTTTACCCATCAGCACTACTGTGGCTGAAAAACTTCTCTTCAACAGTTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp TCAGCCACAGTAGTGCTGATGGGTAAAAATTCTTGTTGGCAAGAAAAACCACTTTTTTTAGCACACTGCTaGTGTCCGACAGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SATVVLMGKNSCWQEKPLFLAHC*CPTGLG
Trigger: ACCCAGGCCTGTCGGACATCAGCAGTGTGCTAAAAA...AAGTGGTTTTTCTTGCCAACAAGAATTTTTACCCATCAGCACTACTGTGGCTGA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp ACTGAACTGTTGAAGAGAAGTTTTTCAGCCACAGTAGTGCTGATGGGTAAAAATAGTTTCATTTCCTGGTaGGGGCTCTCTTCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: TELLKRSFSATVVLMGKNSFISW*GLSSGP
Trigger: AGGCCCGGAAGAGAGCCCTCACCAGGAAATGAAACT...ATTTTTACCCATCAGCACTACTGTGGCTGAAAAACTTCTCTTCAACAGTTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp TGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACCGATGTGTGCCGAGTCTaGTGCCTCCACTTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: CLRGLLCLLPKKYQVRSTDVCRV*CLHLRG
Trigger: CCCTCTCAAGTGGAGGCAGCAGACTCGGCACACATC...GGTAGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR GCA 90 bp GAAGTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAACTGAAATCGCCAAATaGTTCCACTTTGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: EVHCPDLTPHLCKELCVQTEIAK*FHFGFQ
Trigger: CTGGAAGCCAAAGTGGAAGCATTTGGCGATTTCAGT...TTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp GTTGGCAAGAAAAACCACTTAGGTGATAGAAAACTGCTTTATAGCATATATCACAGCATGCCCATGGCCTaGTGGGTGGCCAGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: VGKKNHLGDRKLLYSIYHSMPMA*WVARVL
Trigger: AAGGACTCTGGCCACCCAGCAGGCCATGGGCATGCT...GTGATATATGCTATAAAGCAGTTTTCTATCACCTAAGTGGTTTTTCTTGCCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp TCCCTATTAGCCTCCTATAAGAAAGGACTTCCTGAAGTTCACTGTCCAGATCTATTGGCTTTTGATGCCTaGCTTGGCTTCGAAGCAACC +
Preference number: 4 (lower is better)
Translates to: SLLASYKKGLPEVHCPDLLAFDA*LGFEAT
Trigger: GGTTGCTTCGAAGCCAAGGCAGGCATCAAAAGCCAA...TAGATCTGGACAGTGAACTTCAGGAAGTCCTTTCTTATAGGAGGCTAATAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp GATAGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAACCTGAGGGATGCTGGTaGAGAAGGCCACTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: DRKLLYSIYHPEGHPLSKPEGCW*RRPLWL
Trigger: AAGCCAAAGTGGCCTTCTGCACCAGCATCCCTCAGG...TTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp TCATGTTATTCTCAATCCCTATTAGCCTCCTATAAGAAAGGACTTCCTGAAGTTGGGTGTCCTGAGGGATaGTGGTGCAGAAGGCCACTT +
Preference number: 4 (lower is better)
Translates to: SCYSQSLLASYKKGLPEVGCPEG*WCRRPL
Trigger: AAGTGGCCTTCTGCACCAGCATCCCTCAGGACACCC...AACTTCAGGAAGTCCTTTCTTATAGGAGGCTAATAGGGATTGAGAATAACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp TGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACCTAACTCCACACCTATaGAAGGAGCTGTGTGTACAA +
Preference number: 4 (lower is better)
Translates to: CFIAYITLKGIHCQNVAHLTPHL*KELCVQ
Trigger: TTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAG...GTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp GGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGCTTTTTTGGGAAGTCTCAAGGTaGCAACAGTTTCATTTCCTG +
Preference number: 4 (lower is better)
Translates to: GDLYSTLNDSAQECPRLFWEVSR*QQFHFL
Trigger: CAGGAAATGAAACTGTTGGCACCTTGAGACTTCCCA...AAAAAGCCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp GAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCTTCATCTAGGTGGTTaGATATGTGGGTTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: EFHFLGGGDLYSTLNDSALHLGG*ICGFPV
Trigger: CACAGGAAACCCACATATCCAACCACCTAGATGAAG...GGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp TCCTTTTGTCCTGCGGTCCATATAAGAGGGTCTGGATCTGGAGACACTGTAGAAACAACTTCATCTAGGTaGTTGGATATGTGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: SFCPAVHIRGSGSGDTVETTSSR*LDMWVS
Trigger: GGAAACCCACATATCCAACCACCTAGATGAAGTTGT...TTCTACAGTGTCTCCAGATCCAGACCCTCTTATATGGACCGCAGGACAAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR CCA 90 bp TGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGCTCTGCCCATGGTATaGAAAAGCTCAATGGAAAAC +
Preference number: 4 (lower is better)
Translates to: CFIAYITLKGIHCQNVAHALPMV*KSSMEN
Trigger: GTTTTCCATTGAGCTTTTCCATACCATGGGCAGAGC...GTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp GTATGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTGAAGCGACAGCAGCATaGGCGACGATGTGTGCCGAG +
Preference number: 4 (lower is better)
Translates to: VCLRGLLCLLPKKYQVRSEATAA*ATMCAE
Trigger: CTCGGCACACATCGTCGCCCATGCTGCTGTCGCTTC...AGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CCA 90 bp TCCCTATTAGCCTCCTATAAGAAAGGACTTCCTGAAGTTCACTGTCCAGATCTATGCTCAGCTACATCATaGTGCTCGTGTCTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: SLLASYKKGLPEVHCPDLCSATS*CSCLPE
Trigger: TTCAGGGAGACACGAGCACCATGATGTAGCTGAGCA...TAGATCTGGACAGTGAACTTCAGGAAGTCCTTTCTTATAGGAGGCTAATAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp TTCTTACAGTTCTGGAAGCTGGGAAGTCTCAAGGTGCCAACAGTTTCATTTCCTCAAATGCTTCCACTTTaGCTTCCAGGGACTCTCTCA +
Preference number: 4 (lower is better)
Translates to: FLQFWKLGSLKVPTVSFPQMLPL*LPGTLS
Trigger: TGAGAGAGTCCCTGGAAGCCAAAGTGGAAGCATTTG...AGGAAATGAAACTGTTGGCACCTTGAGACTTCCCAGCTTCCAGAACTGTAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp GGCAAGAAAAACCACTTAGGTGATAGAAAACTGCTTTATAGCATATATCACCCTCCATGGCCTGCTGGGTaGCCAGAGTCCTTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: GKKNHLGDRKLLYSIYHPPWPAG*PESFCP
Trigger: AGGACAAAAGGACTCTGGCCACCCAGCAGGCCATGG...AGGGTGATATATGCTATAAAGCAGTTTTCTATCACCTAAGTGGTTTTTCTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp TCATGTTATTCTCAATCCCTATTAGCCTCCTATAAGAAAGGACTTCCTGAAGTTCCATGGCCTGCTGGGTaGCCAGAGTCCTTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: SCYSQSLLASYKKGLPEVPWPAG*PESFCP
Trigger: AGGACAAAAGGACTCTGGCCACCCAGCAGGCCATGG...AACTTCAGGAAGTCCTTTCTTATAGGAGGCTAATAGGGATTGAGAATAACATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp GTTGGCAAGAAAAACCACTTAGGTGATAGAAAACTGCTTTATAGCATATATCACGCTTCGAAGCAACCTTaGGGGCCGTGGACAGCATGC +
Preference number: 4 (lower is better)
Translates to: VGKKNHLGDRKLLYSIYHASKQP*GPWTAC
Trigger: GCATGCTGTCCACGGCCCCCAAGGTTGCTTCGAAGC...GTGATATATGCTATAAAGCAGTTTTCTATCACCTAAGTGGTTTTTCTTGCCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp TTGGAAATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTCCACTGTCAAAATGTaGCCCACGGGAGGCTTATGG +
Preference number: 4 (lower is better)
Translates to: LEICILTVEFHFLGGGDLSTVKM*PTGGLW
Trigger: CCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGA...CAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGATTTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CCA 90 bp CTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTGGTAAAAATTCTTGTTaGCAAGAAAAACCACTTAGG +
Preference number: 4 (lower is better)
Translates to: LTPHLCKELCVQADAGLTGKNSC*QEKPLR
Trigger: CCTAAGTGGTTTTTCTTGCCAACAAGAATTTTTACC...AGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp TTGGAAATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGACCTCGATCTGGCACTaGATCTCCTCGTTGACATCG +
Preference number: 4 (lower is better)
Translates to: LEICILTVEFHFLGGGDLTSIWH*ISSLTS
Trigger: CGATGTCAACGAGGAGATCCAGTGCCAGATCGAGGT...CAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGATTTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp GTTGGCAAGAAAAACCACTTAGGTGATAGAAAACTGCTTTATAGCATATATCACCAGCCTGCAGCCTCATaGCCACAGTCTGTGGGACCA +
Preference number: 4 (lower is better)
Translates to: VGKKNHLGDRKLLYSIYHQPAAS*PQSVGP
Trigger: TGGTCCCACAGACTGTGGCCATGAGGCTGCAGGCTG...GTGATATATGCTATAAAGCAGTTTTCTATCACCTAAGTGGTTTTTCTTGCCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp CTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAAATTTTCCCCATCAATACTaGAGGTGGTGCCCTGCACAA +
Preference number: 4 (lower is better)
Translates to: LTVEFHFLGGGDLYSTLNFPHQY*RWCPAQ
Trigger: TTGTGCAGGGCACCACCTCCAGTATTGATGGGGAAA...ATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp ATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTTATTTCTTACAGTTCTaGAAGCTGGGAAGTCTCAAG +
Preference number: 4 (lower is better)
Translates to: IHCQNVAHGRLMVSLLHVYFLQF*KLGSLK
Trigger: CTTGAGACTTCCCAGCTTCCAGAACTGTAAGAAATA...AACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
3UTR CAA 72 bp CTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTaGTACAGCACCCTAAATGACAGTGCCCAGGAATGT +
Preference number: 4 (lower is better)
Translates to: LTVEFHFLGGGD*YSTLNDSAQEC
Trigger: ACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
3UTR CAA 72 bp GGTCTCACTGTTGCATGTTGGGGCCAACAGTTGGCCTaGGAAATCTGTATCCTGACTGTTGAATTCCATTTT +
Preference number: 4 (lower is better)
Translates to: GLTVACWGQQLA*EICILTVEFHF
Trigger: AAAATGGAATTCAACAGTCAGGATACAGATTTCCAAGGCCAACTGTTGGCCCCAACATGCAACAGTGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp CTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGGACAAAGCTTCTTTTaGCTTCTTCTGACCTTGATA +
Preference number: 4 (lower is better)
Translates to: LYSIYHPEGHPLSKCGPRGQSFF*LLLTLI
Trigger: TATCAAGGTCAGAAGAAGTCAAAAGAAGCTTTGTCC...CCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR TCA 90 bp AGAAGTTTTTCAGCCACAGTAGTGCTGATGGGTAAAAATTCTTGTTGGCAAGAACCTGGAGGAAGTGGTTaGTGGATACATCGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: RSFSATVVLMGKNSCWQEPGGSG*WIHRGV
Trigger: GACTCCACGATGTATCCATCAACCACTTCCTCCAGG...TTCTTGCCAACAAGAATTTTTACCCATCAGCACTACTGTGGCTGAAAAACTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR TCA 90 bp GTATGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTTCTGCTGCCTCCACTTaGGAGGGGCTTCTACTCAGG +
Preference number: 4 (lower is better)
Translates to: VCLRGLLCLLPKKYQVRSSAAST*EGLLLR
Trigger: CCTGAGTAGAAGCCCCTCTCAAGTGGAGGCAGCAGA...AGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR TCA 90 bp GGCAAGAAAAACCACTTAGGTGATAGAAAACTGCTTTATAGCATATATCACCCTCTGCCACCTCGGGACTaGAATCGCCAAATGCTTCCA +
Preference number: 4 (lower is better)
Translates to: GKKNHLGDRKLLYSIYHPLPPRD*NRQMLP
Trigger: TGGAAGCATTTGGCGATTTCAGTCCCGAGGTGGCAG...AGGGTGATATATGCTATAAAGCAGTTTTCTATCACCTAAGTGGTTTTTCTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp GGCAAGAAAAACCACTTAGGTGATAGAAAACTGCTTTATAGCATATATCACCCTGGCCACTTTGGCTTTTaGTGCCTGCCTTGGCTTCGA +
Preference number: 4 (lower is better)
Translates to: GKKNHLGDRKLLYSIYHPGHFGF*CLPWLR
Trigger: TCGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCC...AGGGTGATATATGCTATAAAGCAGTTTTCTATCACCTAAGTGGTTTTTCTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp TGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTGTATCCTGACTGTTaGATTCCATTTTCTAGGCGG +
Preference number: 4 (lower is better)
Translates to: CILTVEFHFLGGGDLYSTLYPDC*IPFSRR
Trigger: CCGCCTAGAAAATGGAATTCAACAGTCAGGATACAG...GGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp ATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTACTGTATCCTGACTGTTaGATTCCATTTTCTAGGCGG +
Preference number: 4 (lower is better)
Translates to: ILTVEFHFLGGGDLYSTLLYPDC*IPFSRR
Trigger: CCGCCTAGAAAATGGAATTCAACAGTCAGGATACAG...TAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp TTCTTACAGTTCTGGAAGCTGGGAAGTCTCAAGGTGCCAACAGTTTCATTTCCTTTTGAAAACACATGCTaGCAGCAGCGTGTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: FLQFWKLGSLKVPTVSFPFENTC*QQRVQV
Trigger: AACCTGAACACGCTGCTGTCAGCATGTGTTTTCAAA...AGGAAATGAAACTGTTGGCACCTTGAGACTTCCCAGCTTCCAGAACTGTAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp TCCCTATTAGCCTCCTATAAGAAAGGACTTCCTGAAGTTCACTGTCCAGATCTAGGGAGAGTAAAGCTCTaGCCATGGTATGGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: SLLASYKKGLPEVHCPDLGRVKL*PWYGKA
Trigger: AGCTTTTCCATACCATGGGCAGAGCTTTACTCTCCC...TAGATCTGGACAGTGAACTTCAGGAAGTCCTTTCTTATAGGAGGCTAATAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp TGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCACTGAAATCGCCAAATaGTTCCACTTTGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: CILTVEFHFLGGGDLYSTTEIAK*FHFGFQ
Trigger: CTGGAAGCCAAAGTGGAAGCATTTGGCGATTTCAGT...GGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp ACTGAACTGTTGAAGAGAAGTTTTTCAGCCACAGTAGTGCTGATGGGTAAAAATGAAGACAATGGTCCCTaGTTCTCTCCACCCTGTCGT +
Preference number: 4 (lower is better)
Translates to: TELLKRSFSATVVLMGKNEDNGP*FSPPCR
Trigger: ACGACAGGGTGGAGAGAAGCAGGGACCATTGTCTTC...ATTTTTACCCATCAGCACTACTGTGGCTGAAAAACTTCTCTTCAACAGTTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp TCAGCCACAGTAGTGCTGATGGGTAAAAATTCTTGTTGGCAAGAAAAACCACTTCAACGCACAAGCTCATaGACGGCCTGTTTGTACTCA +
Preference number: 4 (lower is better)
Translates to: SATVVLMGKNSCWQEKPLQRTSS*TACLYS
Trigger: TGAGTACAAACAGGCCGTCCATGAGCTTGTGCGTTG...AAGTGGTTTTTCTTGCCAACAAGAATTTTTACCCATCAGCACTACTGTGGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp CATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAACTAATTCTCTCAATATaGGTACACACTCACGACTTG +
Preference number: 4 (lower is better)
Translates to: HFLGGGDLYSTLNDSAQELILSI*VHTHDL
Trigger: CAAGTCGTGAGTGTGTACCCATATTGAGAGAATTAG...TTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp GAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCATGATAAGATGTGCCTaGAGGAAGTGGTTGATGGAT +
Preference number: 4 (lower is better)
Translates to: EFHFLGGGDLYSTLNDSAMIRCA*RKWLMD
Trigger: ATCCATCAACCACTTCCTCCAGGCACATCTTATCAT...GGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp ATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCCAAATGCTTCCACTTTaGCTTCCAGGGACTCTCTCA +
Preference number: 4 (lower is better)
Translates to: ICILTVEFHFLGGGDLYSQMLPL*LPGTLS
Trigger: TGAGAGAGTCCCTGGAAGCCAAAGTGGAAGCATTTG...GCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CCA 90 bp TGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCCATATAAGAGGGTCTaGATCTGGAGACACTGTAGA +
Preference number: 4 (lower is better)
Translates to: CILTVEFHFLGGGDLYSTPYKRV*IWRHCR
Trigger: TCTACAGTGTCTCCAGATCCAGACCCTCTTATATGG...GGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR CCA 90 bp AGAAGTTTTTCAGCCACAGTAGTGCTGATGGGTAAAAATTCTTGTTGGCAAGAACTCACTGTTGCATGTTaGGGCCAACAGTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: RSFSATVVLMGKNSCWQELTVAC*GQQLAL
Trigger: CAAGGCCAACTGTTGGCCCCAACATGCAACAGTGAG...TTCTTGCCAACAAGAATTTTTACCCATCAGCACTACTGTGGCTGAAAAACTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp TCAGCCACAGTAGTGCTGATGGGTAAAAATTCTTGTTGGCAAGAAAAACCACTTACCTACTCAGTCAGTTaGTACTGTTCCTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SATVVLMGKNSCWQEKPLTYSVS*YCSFCQ
Trigger: CTGGCAGAAGGAACAGTATCAACTGACTGAGTAGGT...AAGTGGTTTTTCTTGCCAACAAGAATTTTTACCCATCAGCACTACTGTGGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp GGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGCTTTTTGCTTCCTTAAATTTTTaGAGGGAGAGTAAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: GDLYSTLNDSAQECPRLFASLNF*RESKAL
Trigger: CAGAGCTTTACTCTCCCTTCAAAAATTTAAGGAAGC...AAAAAGCCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR TCA 90 bp GTATGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTCTGCCACCTCGGGACTaGAATCGCCAAATGCTTCCA +
Preference number: 4 (lower is better)
Translates to: VCLRGLLCLLPKKYQVRSLPPRD*NRQMLP
Trigger: TGGAAGCATTTGGCGATTTCAGTCCCGAGGTGGCAG...AGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR TCA 90 bp TCATGTTATTCTCAATCCCTATTAGCCTCCTATAAGAAAGGACTTCCTGAAGTTTTTTTAGCACACTGCTaGTGTCCGACAGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SCYSQSLLASYKKGLPEVFLAHC*CPTGLG
Trigger: ACCCAGGCCTGTCGGACATCAGCAGTGTGCTAAAAA...AACTTCAGGAAGTCCTTTCTTATAGGAGGCTAATAGGGATTGAGAATAACATGA
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp GTGATAGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAGGGAGAGTAAAGCTCTaGCCATGGTATGGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: VIENCFIAYITLKGIHCQGRVKL*PWYGKA
Trigger: AGCTTTTCCATACCATGGGCAGAGCTTTACTCTCCC...TTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCTATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp ATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACTGAAATCGCCAAATaGTTCCACTTTGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: ICILTVEFHFLGGGDLYSTEIAK*FHFGFQ
Trigger: CTGGAAGCCAAAGTGGAAGCATTTGGCGATTTCAGT...GCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp AAAAAGGTAAGATTAGATCCATTCCTCATGCCATCCACACAAATAAACTCCAAAGAGCCGGTATGTCTCTaGCACCTCGGGACTGAAATC +
Preference number: 4 (lower is better)
Translates to: KKVRLDPFLMPSTQINSKEPVCL*HLGTEI
Trigger: GATTTCAGTCCCGAGGTGGCAGAGACATACCGGCTC...TTTGGAGTTTATTTGTGTGGATGGCATGAGGAATGGATCTAATCTTACCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR GCA 90 bp AGAAGTTTTTCAGCCACAGTAGTGCTGATGGGTAAAAATTCTTGTTGGCAAGAATTGGCTTTTGATGCCTaGCTTGGCTTCGAAGCAACC +
Preference number: 4 (lower is better)
Translates to: RSFSATVVLMGKNSCWQELAFDA*LGFEAT
Trigger: GGTTGCTTCGAAGCCAAGGCAGGCATCAAAAGCCAA...TTCTTGCCAACAAGAATTTTTACCCATCAGCACTACTGTGGCTGAAAAACTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp GTTGGCAAGAAAAACCACTTAGGTGATAGAAAACTGCTTTATAGCATATATCACGTGTGTACAAGCAGATaGCGGGCTGACTCCTGCACA +
Preference number: 4 (lower is better)
Translates to: VGKKNHLGDRKLLYSIYHVCTSR*RADSCT
Trigger: TGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACAC...GTGATATATGCTATAAAGCAGTTTTCTATCACCTAAGTGGTTTTTCTTGCCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp TCCCTATTAGCCTCCTATAAGAAAGGACTTCCTGAAGTTCACTGTCCAGATCTACTAACTCCACACCTATaGAAGGAGCTGTGTGTACAA +
Preference number: 4 (lower is better)
Translates to: SLLASYKKGLPEVHCPDLLTPHL*KELCVQ
Trigger: TTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAG...TAGATCTGGACAGTGAACTTCAGGAAGTCCTTTCTTATAGGAGGCTAATAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp AGAAGTTTTTCAGCCACAGTAGTGCTGATGGGTAAAAATTCTTGTTGGCAAGAAGTGTACACGATAGTGTaGCAACTCAGGAAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RSFSATVVLMGKNSCWQEVYTIV*QLRKQL
Trigger: GAGCTGCTTCCTGAGTTGGCACACTATCGTGTACAC...TTCTTGCCAACAAGAATTTTTACCCATCAGCACTACTGTGGCTGAAAAACTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp TTGGAAATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGCTTCCTGTTCGACTTTaGCATCCTCACACGACTATG +
Preference number: 4 (lower is better)
Translates to: LEICILTVEFHFLGGGDLLPVRL*HPHTTM
Trigger: CATAGTCGTGTGAGGATGGCAAAGTCGAACAGGAAG...CAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGATTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR GCA 90 bp CTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGTATTTTGTCGAAGTTTaGAAACCAATCTTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: LYSIYHPEGHPLSKCGPRYFVEV*KPIFGS
Trigger: GCTCCCAAAGATTGGTTTGCAAACTTCGACAAAATA...CCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394135.7
ENST00000558663.5
CDS-3UTR CCA 90 bp ACTGAACTGTTGAAGAGAAGTTTTTCAGCCACAGTAGTGCTGATGGGTAAAAATTTGATGGATACATCGTaGAGTCCCAGGGCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: TELLKRSFSATVVLMGKNLMDTS*SPRACS
Trigger: AGAGCAAGCCCTGGGACTCCACGATGTATCCATCAA...ATTTTTACCCATCAGCACTACTGTGGCTGAAAAACTTCTCTTCAACAGTTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp GATAGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATTGATGGATACATCGTaGAGTCCCAGGGCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: DRKLLYSIYHPEGHPLSKLMDTS*SPRACS
Trigger: AGAGCAAGCCCTGGGACTCCACGATGTATCCATCAA...TTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp AGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTTGCAGAAGGCCACTTTaGCTTTTGATGCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: RKLLYSIYHPEGHPLSKCCRRPL*LLMPAL
Trigger: CAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCA...ACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CCA 90 bp GATAGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAAGTTGGGGCCAACAGTTaGCCTTGGAAATCTGTATCC +
Preference number: 4 (lower is better)
Translates to: DRKLLYSIYHPEGHPLSKVGANS*PWKSVS
Trigger: GGATACAGATTTCCAAGGCCAACTGTTGGCCCCAAC...TTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CCA 90 bp TGTCGTGGCTCTACTGAGTTTATTTTCCCCATCAATACTGGAGGTGGTGCCCTGGGTAAAAATTCTTGTTaGCAAGAAAAACCACTTAGG +
Preference number: 4 (lower is better)
Translates to: CRGSTEFIFPINTGGGALGKNSC*QEKPLR
Trigger: CCTAAGTGGTTTTTCTTGCCAACAAGAATTTTTACC...CAGGGCACCACCTCCAGTATTGATGGGGAAAATAAACTCAGTAGAGCCACGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CCA 90 bp GGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGCTTTTTGTCTTCAATAGCGAGTaGAGAAGAGTATTTTGTCGA +
Preference number: 4 (lower is better)
Translates to: GDLYSTLNDSAQECPRLFVFNSE*RRVFCR
Trigger: TCGACAAAATACTCTTCTCCACTCGCTATTGAAGAC...AAAAAGCCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558663.5
CDS-3UTR TCA 90 bp GAAATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCTTTCTAGGTCTCTaGATCACAACTGCCAATGAG +
Preference number: 4 (lower is better)
Translates to: EICILTVEFHFLGGGDLYSFLGL*ITTANE
Trigger: CTCATTGGCAGTTGTGATTCAGAGACCTAGAAAGCT...GTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp TCAGCCACAGTAGTGCTGATGGGTAAAAATTCTTGTTGGCAAGAAAAACCACTTTGGAATAGTGCTGTCTaGAGCAGCTTGTTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: SATVVLMGKNSCWQEKPLWNSAV*SSLFWN
Trigger: GTTCCAAAACAAGCTGCTTCAGACAGCACTATTCCA...AAGTGGTTTTTCTTGCCAACAAGAATTTTTACCCATCAGCACTACTGTGGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR TCA 90 bp GATAGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATTGTTTTGCTTGCAGTaGCAGTCCTTTCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: DRKLLYSIYHPEGHPLSKLFCLQ*QSFQLE
Trigger: CTCCAGCTGAAAGGACTGTCACTGCAAGCAAAACAA...TTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR TCA 90 bp CTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCAGTGCAAATGATAATCTaGTCCGTGCTTCAATTTCTA +
Preference number: 4 (lower is better)
Translates to: LLYSIYHPEGHPLSKCGPVQMII*SVLQFL
Trigger: TAGAAATTGAAGCACGGATCAGATTATCATTTGCAC...TGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR TCA 90 bp GAAGTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGTGCAAATGATAATCTaGTCCGTGCTTCAATTTCTA +
Preference number: 4 (lower is better)
Translates to: EVHCPDLTPHLCKELCVQVQMII*SVLQFL
Trigger: TAGAAATTGAAGCACGGATCAGATTATCATTTGCAC...TTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR TCA 90 bp ATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAGGACAAAGCTTCTTTTaGCTTCTTCTGACCTTGATA +
Preference number: 4 (lower is better)
Translates to: ILTVEFHFLGGGDLYSTLGQSFF*LLLTLI
Trigger: TATCAAGGTCAGAAGAAGTCAAAAGAAGCTTTGTCC...TAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR TCA 90 bp AAAAAGGTAAGATTAGATCCATTCCTCATGCCATCCACACAAATAAACTCCAAACCTGGAGGAAGTGGTTaGTGGATACATCGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: KKVRLDPFLMPSTQINSKPGGSG*WIHRGV
Trigger: GACTCCACGATGTATCCATCAACCACTTCCTCCAGG...TTTGGAGTTTATTTGTGTGGATGGCATGAGGAATGGATCTAATCTTACCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR TCA 90 bp TCAGCCACAGTAGTGCTGATGGGTAAAAATTCTTGTTGGCAAGAAAAACCACTTCTGTATCCTGACTGTTaGATTCCATTTTCTAGGCGG +
Preference number: 4 (lower is better)
Translates to: SATVVLMGKNSCWQEKPLLYPDC*IPFSRR
Trigger: CCGCCTAGAAAATGGAATTCAACAGTCAGGATACAG...AAGTGGTTTTTCTTGCCAACAAGAATTTTTACCCATCAGCACTACTGTGGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp TGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACTGGAAATCTGTATCCTaGCTGTTGAATTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: CFIAYITLKGIHCQNVAHWKSVS*LLNSIF
Trigger: GAAAATGGAATTCAACAGTCAGGATACAGATTTCCA...GTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp TCAGCCACAGTAGTGCTGATGGGTAAAAATTCTTGTTGGCAAGAAAAACCACTTCTGTCGTGGCTCTACTaGGTTTATTTTCCCCATCAA +
Preference number: 4 (lower is better)
Translates to: SATVVLMGKNSCWQEKPLLSWLY*VYFPHQ
Trigger: TTGATGGGGAAAATAAACTCAGTAGAGCCACGACAG...AAGTGGTTTTTCTTGCCAACAAGAATTTTTACCCATCAGCACTACTGTGGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp AAAAAGGTAAGATTAGATCCATTCCTCATGCCATCCACACAAATAAACTCCAAAAGGCAGAGGTTGCAGTaGGCCAAGATCACACCACTA +
Preference number: 4 (lower is better)
Translates to: KKVRLDPFLMPSTQINSKRQRLQ*AKITPL
Trigger: TAGTGGTGTGATCTTGGCTCACTGCAACCTCTGCCT...TTTGGAGTTTATTTGTGTGGATGGCATGAGGAATGGATCTAATCTTACCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR TCA 90 bp GTATGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACAAGGGAGAGAAATTaGCCTTGGAGAGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: VCLRGLLCLLPKKYQVRSTRERN*PWRGEG
Trigger: TCCCTCCCCTCTCCAAGGTCAATTTCTCTCCCTTGT...AGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR GCA 90 bp TGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACCTGGAGTCCCAGGGCTTaGTCTACACCTGCTAATTCT +
Preference number: 4 (lower is better)
Translates to: CLRGLLCLLPKKYQVRSTWSPRA*STPANS
Trigger: AGAATTAGCAGGTGTAGAGCAAGCCCTGGGACTCCA...GGTAGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR GCA 90 bp AAAAAGGTAAGATTAGATCCATTCCTCATGCCATCCACACAAATAAACTCCAAATCAGCTACATCATGGTaGTCGTGTCTCCCTGAAGCG +
Preference number: 4 (lower is better)
Translates to: KKVRLDPFLMPSTQINSKSATSW*SCLPEA
Trigger: CGCTTCAGGGAGACACGAGCACCATGATGTAGCTGA...TTTGGAGTTTATTTGTGTGGATGGCATGAGGAATGGATCTAATCTTACCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR GCA 90 bp TTGGAAATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGCTAACTCCACACCTATaGAAGGAGCTGTGTGTACAA +
Preference number: 4 (lower is better)
Translates to: LEICILTVEFHFLGGGDLLTPHL*KELCVQ
Trigger: TTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAG...CAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGATTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp GGCAAGAAAAACCACTTAGGTGATAGAAAACTGCTTTATAGCATATATCACCCTGAGGCACAATGGAGTTaGCGAGGATTTGTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: GKKNHLGDRKLLYSIYHPEAQWS*RGFVWL
Trigger: AAGCCAGACAAATCCTCGCCAACTCCATTGTGCCTC...AGGGTGATATATGCTATAAAGCAGTTTTCTATCACCTAAGTGGTTTTTCTTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp TGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACCTTGATGGATACATCGTaGAGTCCCAGGGCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: CLRGLLCLLPKKYQVRSTLMDTS*SPRACS
Trigger: AGAGCAAGCCCTGGGACTCCACGATGTATCCATCAA...GGTAGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CCA 90 bp GTGATAGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAACCATATAAGAGGGTCTaGATCTGGAGACACTGTAGA +
Preference number: 4 (lower is better)
Translates to: VIENCFIAYITLKGIHCQPYKRV*IWRHCR
Trigger: TCTACAGTGTCTCCAGATCCAGACCCTCTTATATGG...TTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCTATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR CCA 90 bp GTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGGAATTTTCTTAAAGTaGTATCGTTGCCTGTTGATA +
Preference number: 4 (lower is better)
Translates to: VHCPDLTPHLCKELCVQAGIFLK*YRCLLI
Trigger: TATCAACAGGCAACGATACCACTTTAAGAAAATTCC...TGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394135.7
ENST00000558663.5
CDS-3UTR TCA 90 bp CTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACCACAACCTACTCAGTCAGTTaGTACTGTTCCTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LRGLLCLLPKKYQVRSTTTYSVS*YCSFCQ
Trigger: CTGGCAGAAGGAACAGTATCAACTGACTGAGTAGGT...TGTGGTAGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR TCA 90 bp ACTGAACTGTTGAAGAGAAGTTTTTCAGCCACAGTAGTGCTGATGGGTAAAAATTTTTCTAGGCGGAGGTaGTTTGTACAGCACCCTAAA +
Preference number: 4 (lower is better)
Translates to: TELLKRSFSATVVLMGKNFSRRR*FVQHPK
Trigger: TTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAA...ATTTTTACCCATCAGCACTACTGTGGCTGAAAAACTTCTCTTCAACAGTTCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp GTATGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTAAACCATCCTCTTCTTaGCAGCCGTGGGTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: VCLRGLLCLLPKKYQVRSKPSSS*QPWVQL
Trigger: AAGCTGAACCCACGGCTGGCAAGAAGAGGATGGTTT...AGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR GCA 90 bp AGAAGTTTTTCAGCCACAGTAGTGCTGATGGGTAAAAATTCTTGTTGGCAAGAACTAACTCCACACCTATaGAAGGAGCTGTGTGTACAA +
Preference number: 4 (lower is better)
Translates to: RSFSATVVLMGKNSCWQELTPHL*KELCVQ
Trigger: TTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAG...TTCTTGCCAACAAGAATTTTTACCCATCAGCACTACTGTGGCTGAAAAACTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp GAAATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACTTGCCCTCTGGTTCCTaGTTTATCAGTTTGGTGATT +
Preference number: 4 (lower is better)
Translates to: EICILTVEFHFLGGGDLYLPSGS*FISLVI
Trigger: AATCACCAAACTGATAAAGCAGGAACCAGAGGGCAA...GTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
CDS-3UTR GCA 90 bp GTTGGCAAGAAAAACCACTTAGGTGATAGAAAACTGCTTTATAGCATATATCACCTTGGCAGCGTGATTTaGCCTCTGGTTCCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: VGKKNHLGDRKLLYSIYHLGSVI*PLVPAL
Trigger: TAAAGCAGGAACCAGAGGGCAAATCACGCTGCCAAG...GTGATATATGCTATAAAGCAGTTTTCTATCACCTAAGTGGTTTTTCTTGCCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
CDS-3UTR GCA 90 bp AGAAGTTTTTCAGCCACAGTAGTGCTGATGGGTAAAAATTCTTGTTGGCAAGAATGTCGTAAAATCCCTTaGCAGTTTACCCAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: RSFSATVVLMGKNSCWQECRKIP*QFTQSA
Trigger: AGCAGACTGGGTAAACTGGCAAGGGATTTTACGACA...TTCTTGCCAACAAGAATTTTTACCCATCAGCACTACTGTGGCTGAAAAACTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394132.7
ENST00000394135.7
CDS-3UTR GCA 90 bp TGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCTATTTTGTCGAAGTTTaGAAACCAATCTTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: CILTVEFHFLGGGDLYSTYFVEV*KPIFGS
Trigger: GCTCCCAAAGATTGGTTTGCAAACTTCGACAAAATA...GGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394135.7
ENST00000558663.5
CDS-3UTR CCA 90 bp GTATGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTTCTTCTTGCCAGCCGTaGGTTCAGCTTTCTAGGTCT +
Preference number: 4 (lower is better)
Translates to: VCLRGLLCLLPKKYQVRSSSCQP*VQLSRS
Trigger: AGACCTAGAAAGCTGAACCCACGGCTGGCAAGAAGA...AGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CCA 90 bp GAAATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACACAACTTCATCTAGGTaGTTGGATATGTGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: EICILTVEFHFLGGGDLYTTSSR*LDMWVS
Trigger: GGAAACCCACATATCCAACCACCTAGATGAAGTTGT...GTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp GTATGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTCAACGCACAAGCTCATaGACGGCCTGTTTGTACTCA +
Preference number: 4 (lower is better)
Translates to: VCLRGLLCLLPKKYQVRSQRTSS*TACLYS
Trigger: TGAGTACAAACAGGCCGTCCATGAGCTTGTGCGTTG...AGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CCA 90 bp GTATGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTGAGGCACAATGGAGTTaGCGAGGATTTGTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: VCLRGLLCLLPKKYQVRSEAQWS*RGFVWL
Trigger: AAGCCAGACAAATCCTCGCCAACTCCATTGTGCCTC...AGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CCA 90 bp GTATGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTTGCTCAGCTACATCATaGTGCTCGTGTCTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: VCLRGLLCLLPKKYQVRSCSATS*CSCLPE
Trigger: TTCAGGGAGACACGAGCACCATGATGTAGCTGAGCA...AGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CCA 90 bp CTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACCACACAAATGCTTCCACTTTaGCTTCCAGGGACTCTCTCA +
Preference number: 4 (lower is better)
Translates to: LRGLLCLLPKKYQVRSTTQMLPL*LPGTLS
Trigger: TGAGAGAGTCCCTGGAAGCCAAAGTGGAAGCATTTG...TGTGGTAGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CCA 90 bp TTGGAAATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGCTCACCAATAGCGAGTaGAGAAGAGTATTTTGTCGA +
Preference number: 4 (lower is better)
Translates to: LEICILTVEFHFLGGGDLLTNSE*RRVFCR
Trigger: TCGACAAAATACTCTTCTCCACTCGCTATTGGTGAG...CAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGATTTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394135.7
CDS-3UTR TCA 90 bp CTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACCACAAGCTTTCTAGGTCTCTaGATCACAACTGCCAATGAG +
Preference number: 4 (lower is better)
Translates to: LRGLLCLLPKKYQVRSTTSFLGL*ITTANE
Trigger: CTCATTGGCAGTTGTGATTCAGAGACCTAGAAAGCT...TGTGGTAGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR TCA 90 bp GTATGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTTTGTTTTGCTTGCAGTaGCAGTCCTTTCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VCLRGLLCLLPKKYQVRSLFCLQ*QSFQLE
Trigger: CTCCAGCTGAAAGGACTGTCACTGCAAGCAAAACAA...AGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR TCA 90 bp GTGATAGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAGGACAAAGCTTCTTTTaGCTTCTTCTGACCTTGATA +
Preference number: 4 (lower is better)
Translates to: VIENCFIAYITLKGIHCQGQSFF*LLLTLI
Trigger: TATCAAGGTCAGAAGAAGTCAAAAGAAGCTTTGTCC...TTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCTATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR TCA 90 bp GAAATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACGGACAAAGCTTCTTTTaGCTTCTTCTGACCTTGATA +
Preference number: 4 (lower is better)
Translates to: EICILTVEFHFLGGGDLYGQSFF*LLLTLI
Trigger: TATCAAGGTCAGAAGAAGTCAAAAGAAGCTTTGTCC...GTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp GGCAAGAAAAACCACTTAGGTGATAGAAAACTGCTTTATAGCATATATCACCCTGCATGTTGTTTTGCTTaGAGTGACAGTCCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: GKKNHLGDRKLLYSIYHPACCFA*SDSPFS
Trigger: GCTGAAAGGACTGTCACTGCAAGCAAAACAACATGC...AGGGTGATATATGCTATAAAGCAGTTTTCTATCACCTAAGTGGTTTTTCTTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR GCA 90 bp AAAAAGGTAAGATTAGATCCATTCCTCATGCCATCCACACAAATAAACTCCAAAGGGAGAGTAAAGCTCTaGCCATGGTATGGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: KKVRLDPFLMPSTQINSKGRVKL*PWYGKA
Trigger: AGCTTTTCCATACCATGGGCAGAGCTTTACTCTCCC...TTTGGAGTTTATTTGTGTGGATGGCATGAGGAATGGATCTAATCTTACCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CCA 90 bp GATAGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAAACAACTTCATCTAGGTaGTTGGATATGTGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: DRKLLYSIYHPEGHPLSKTTSSR*LDMWVS
Trigger: GGAAACCCACATATCCAACCACCTAGATGAAGTTGT...TTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CCA 90 bp AAAAAGGTAAGATTAGATCCATTCCTCATGCCATCCACACAAATAAACTCCAAATATAGGGAGGCACAATaGAGTTGGCGAGGATTTGTC +
Preference number: 4 (lower is better)
Translates to: KKVRLDPFLMPSTQINSKYREAQ*SWRGFV
Trigger: GACAAATCCTCGCCAACTCCATTGTGCCTCCCTATA...TTTGGAGTTTATTTGTGTGGATGGCATGAGGAATGGATCTAATCTTACCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CCA 90 bp CTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACCACAGCTCTGCCCATGGTATaGAAAAGCTCAATGGAAAAC +
Preference number: 4 (lower is better)
Translates to: LRGLLCLLPKKYQVRSTTALPMV*KSSMEN
Trigger: GTTTTCCATTGAGCTTTTCCATACCATGGGCAGAGC...TGTGGTAGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CCA 90 bp TGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACCGTAAAGCTCTGCCCATaGTATGGAAAAGCTCAATGG +
Preference number: 4 (lower is better)
Translates to: CLRGLLCLLPKKYQVRSTVKLCP*YGKAQW
Trigger: CCATTGAGCTTTTCCATACCATGGGCAGAGCTTTAC...GGTAGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR TCA 90 bp GTTGGCAAGAAAAACCACTTAGGTGATAGAAAACTGCTTTATAGCATATATCACAGCTTTCTAGGTCTCTaGATCACAACTGCCAATGAG +
Preference number: 4 (lower is better)
Translates to: VGKKNHLGDRKLLYSIYHSFLGL*ITTANE
Trigger: CTCATTGGCAGTTGTGATTCAGAGACCTAGAAAGCT...GTGATATATGCTATAAAGCAGTTTTCTATCACCTAAGTGGTTTTTCTTGCCAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR TCA 90 bp AAAAAGGTAAGATTAGATCCATTCCTCATGCCATCCACACAAATAAACTCCAAATGGAATAGTGCTGTCTaGAGCAGCTTGTTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: KKVRLDPFLMPSTQINSKWNSAV*SSLFWN
Trigger: GTTCCAAAACAAGCTGCTTCAGACAGCACTATTCCA...TTTGGAGTTTATTTGTGTGGATGGCATGAGGAATGGATCTAATCTTACCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR TCA 90 bp AGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGCTTCCTTAAATTTTTaGAGGGAGAGTAAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: RKLLYSIYHPEGHPLSKCASLNF*RESKAL
Trigger: CAGAGCTTTACTCTCCCTTCAAAAATTTAAGGAAGC...ACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR TCA 90 bp ACTGAACTGTTGAAGAGAAGTTTTTCAGCCACAGTAGTGCTGATGGGTAAAAATTCTCTGCTTTTCCTTTaGCACTCAATCACTCCTTTA +
Preference number: 4 (lower is better)
Translates to: TELLKRSFSATVVLMGKNSLLFL*HSITPL
Trigger: TAAAGGAGTGATTGAGTGTCAAAGGAAAAGCAGAGA...ATTTTTACCCATCAGCACTACTGTGGCTGAAAAACTTCTCTTCAACAGTTCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394132.7
ENST00000394135.7
CDS-3UTR TCA 90 bp GGCAAGAAAAACCACTTAGGTGATAGAAAACTGCTTTATAGCATATATCACCCTGTTTGTCAAAGAACGTaGAATCACCAGCTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: GKKNHLGDRKLLYSIYHPVCQRT*NHQLRG
Trigger: TCCTCTAAGCTGGTGATTTCACGTTCTTTGACAAAC...AGGGTGATATATGCTATAAAGCAGTTTTCTATCACCTAAGTGGTTTTTCTTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394135.7
ENST00000558663.5
CDS-3UTR GCA 90 bp GTATGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTGCATGTTGTTTTGCTTaGAGTGACAGTCCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: VCLRGLLCLLPKKYQVRSACCFA*SDSPFS
Trigger: GCTGAAAGGACTGTCACTGCAAGCAAAACAACATGC...AGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR GCA 90 bp AAAAAGGTAAGATTAGATCCATTCCTCATGCCATCCACACAAATAAACTCCAAACAGGATGATAAGATGTaGCTGGAGGAAGTGGTTGAT +
Preference number: 4 (lower is better)
Translates to: KKVRLDPFLMPSTQINSKQDDKM*LEEVVD
Trigger: ATCAACCACTTCCTCCAGGCACATCTTATCATCCTG...TTTGGAGTTTATTTGTGTGGATGGCATGAGGAATGGATCTAATCTTACCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR GCA 90 bp AAAAAGGTAAGATTAGATCCATTCCTCATGCCATCCACACAAATAAACTCCAAAACTGAAATCGCCAAATaGTTCCACTTTGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: KKVRLDPFLMPSTQINSKTEIAK*FHFGFQ
Trigger: CTGGAAGCCAAAGTGGAAGCATTTGGCGATTTCAGT...TTTGGAGTTTATTTGTGTGGATGGCATGAGGAATGGATCTAATCTTACCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CCA 90 bp AAAAAGGTAAGATTAGATCCATTCCTCATGCCATCCACACAAATAAACTCCAAAAGGTGGTTGGATATGTaGGTTTCCTGTGATTCTTGC +
Preference number: 4 (lower is better)
Translates to: KKVRLDPFLMPSTQINSKRWLDM*VSCDSC
Trigger: GCAAGAATCACAGGAAACCCACATATCCAACCACCT...TTTGGAGTTTATTTGTGTGGATGGCATGAGGAATGGATCTAATCTTACCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CCA 90 bp AAAAAGGTAAGATTAGATCCATTCCTCATGCCATCCACACAAATAAACTCCAAACTTCATCTAGGTGGTTaGATATGTGGGTTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: KKVRLDPFLMPSTQINSKLHLGG*ICGFPV
Trigger: CACAGGAAACCCACATATCCAACCACCTAGATGAAG...TTTGGAGTTTATTTGTGTGGATGGCATGAGGAATGGATCTAATCTTACCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CCA 90 bp TGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACCACAACTTCATCTAGGTaGTTGGATATGTGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: CLRGLLCLLPKKYQVRSTTTSSR*LDMWVS
Trigger: GGAAACCCACATATCCAACCACCTAGATGAAGTTGT...GGTAGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CCA 90 bp TGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACCATGATAAGATGTGCCTaGAGGAAGTGGTTGATGGAT +
Preference number: 4 (lower is better)
Translates to: CLRGLLCLLPKKYQVRSTMIRCA*RKWLMD
Trigger: ATCCATCAACCACTTCCTCCAGGCACATCTTATCAT...GGTAGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CCA 90 bp GTTGGCAAGAAAAACCACTTAGGTGATAGAAAACTGCTTTATAGCATATATCACAAGAGGGTCTGGATCTaGAGACACTTCTTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: VGKKNHLGDRKLLYSIYHKRVWI*RHFFSF
Trigger: GAAACTGAAGAAGTGTCTCCAGATCCAGACCCTCTT...GTGATATATGCTATAAAGCAGTTTTCTATCACCTAAGTGGTTTTTCTTGCCAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394132.7
ENST00000394135.7
ENST00000558663.5
CDS-3UTR CCA 90 bp GTATGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTTTGCAAACCAATCTTTaGGAGCCAGAGGTGGGAATT +
Preference number: 4 (lower is better)
Translates to: VCLRGLLCLLPKKYQVRSLQTNL*EPEVGI
Trigger: AATTCCCACCTCTGGCTCCCAAAGATTGGTTTGCAA...AGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CCA 90 bp TGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACCCTAATTAAATGGTGCTaGACAACTGGGTGGCCATTT +
Preference number: 4 (lower is better)
Translates to: CLRGLLCLLPKKYQVRSTLIKWC*TTGWPF
Trigger: AAATGGCCACCCAGTTGTCCAGCACCATTTAATTAG...GGTAGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR TCA 90 bp TGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACCGCTTCCTTAAATTTTTaGAGGGAGAGTAAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: CLRGLLCLLPKKYQVRSTASLNF*RESKAL
Trigger: CAGAGCTTTACTCTCCCTTCAAAAATTTAAGGAAGC...GGTAGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR TCA 90 bp CTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACCACAGGACAAAGCTTCTTTTaGCTTCTTCTGACCTTGATA +
Preference number: 4 (lower is better)
Translates to: LRGLLCLLPKKYQVRSTTGQSFF*LLLTLI
Trigger: TATCAAGGTCAGAAGAAGTCAAAAGAAGCTTTGTCC...TGTGGTAGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR TCA 90 bp AGAAGTTTTTCAGCCACAGTAGTGCTGATGGGTAAAAATTCTTGTTGGCAAGAATGGAAATCTGTATCCTaGCTGTTGAATTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: RSFSATVVLMGKNSCWQEWKSVS*LLNSIF
Trigger: GAAAATGGAATTCAACAGTCAGGATACAGATTTCCA...TTCTTGCCAACAAGAATTTTTACCCATCAGCACTACTGTGGCTGAAAAACTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR TCA 90 bp GTATGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTGTTTGTCAAAGAACGTaGAATCACCAGCTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: VCLRGLLCLLPKKYQVRSVCQRT*NHQLRG
Trigger: TCCTCTAAGCTGGTGATTTCACGTTCTTTGACAAAC...AGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR TCA 90 bp GTTGGCAAGAAAAACCACTTAGGTGATAGAAAACTGCTTTATAGCATATATCACGTTTGTCAAAGAACGTaGAATCACCAGCTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: VGKKNHLGDRKLLYSIYHVCQRT*NHQLRG
Trigger: TCCTCTAAGCTGGTGATTTCACGTTCTTTGACAAAC...GTGATATATGCTATAAAGCAGTTTTCTATCACCTAAGTGGTTTTTCTTGCCAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394135.7
ENST00000558663.5
CDS-3UTR TCA 90 bp GTATGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTGATGAAGGTGTTATCTaGAGTCACTGGAGCATAGAT +
Preference number: 4 (lower is better)
Translates to: VCLRGLLCLLPKKYQVRSDEGVI*SHWSID
Trigger: ATCTATGCTCCAGTGACTTCAGATAACACCTTCATC...AGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR GCA 90 bp GTTGGCAAGAAAAACCACTTAGGTGATAGAAAACTGCTTTATAGCATATATCACTTGCCCTCTGGTTCCTaGTTTATCAGTTTGGTGATT +
Preference number: 4 (lower is better)
Translates to: VGKKNHLGDRKLLYSIYHLPSGS*FISLVI
Trigger: AATCACCAAACTGATAAAGCAGGAACCAGAGGGCAA...GTGATATATGCTATAAAGCAGTTTTCTATCACCTAAGTGGTTTTTCTTGCCAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
CDS-3UTR CCA 90 bp TTGGAAATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGGGTAAAAATTCTTGTTaGCAAGAAAAACCACTTAGG +
Preference number: 4 (lower is better)
Translates to: LEICILTVEFHFLGGGDLGKNSC*QEKPLR
Trigger: CCTAAGTGGTTTTTCTTGCCAACAAGAATTTTTACC...CAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGATTTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CCA 90 bp GTGATAGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAGGTAAAAATTCTTGTTaGCAAGAAAAACCACTTAGG +
Preference number: 4 (lower is better)
Translates to: VIENCFIAYITLKGIHCQGKNSC*QEKPLR
Trigger: CCTAAGTGGTTTTTCTTGCCAACAAGAATTTTTACC...TTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCTATCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR GCA 90 bp CTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACCACATATTTTGTCGAAGTTTaGAAACCAATCTTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: LRGLLCLLPKKYQVRSTTYFVEV*KPIFGS
Trigger: GCTCCCAAAGATTGGTTTGCAAACTTCGACAAAATA...TGTGGTAGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CCA 90 bp AAAAAGGTAAGATTAGATCCATTCCTCATGCCATCCACACAAATAAACTCCAAACTAATTCTCTCAATATaGGTACACACTCACGACTTG +
Preference number: 4 (lower is better)
Translates to: KKVRLDPFLMPSTQINSKLILSI*VHTHDL
Trigger: CAAGTCGTGAGTGTGTACCCATATTGAGAGAATTAG...TTTGGAGTTTATTTGTGTGGATGGCATGAGGAATGGATCTAATCTTACCTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CCA 90 bp GTATGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTTCCATCAATAGCGAGTaGAGAAGAGTATTTTGTCGA +
Preference number: 4 (lower is better)
Translates to: VCLRGLLCLLPKKYQVRSSINSE*RRVFCR
Trigger: TCGACAAAATACTCTTCTCCACTCGCTATTGATGGA...AGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACATAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR TCA 90 bp AAAAAGGTAAGATTAGATCCATTCCTCATGCCATCCACACAAATAAACTCCAAAGTGCAAATGATAATCTaGTCCGTGCTTCAATTTCTA +
Preference number: 4 (lower is better)
Translates to: KKVRLDPFLMPSTQINSKVQMII*SVLQFL
Trigger: TAGAAATTGAAGCACGGATCAGATTATCATTTGCAC...TTTGGAGTTTATTTGTGTGGATGGCATGAGGAATGGATCTAATCTTACCTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CCA 90 bp CTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACCACAGGAATTTTCTTAAAGTaGTATCGTTGCCTGTTGATA +
Preference number: 4 (lower is better)
Translates to: LRGLLCLLPKKYQVRSTTGIFLK*YRCLLI
Trigger: TATCAACAGGCAACGATACCACTTTAAGAAAATTCC...TGTGGTAGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CAA 90 bp CGACAGGCCTGGGTCTGGGACCAGTGTGTACCAGCAAGCATGGTCTGTGGGGTCGGCCTCAGTCTGCTGTaGTGCCGGGCCGGGCCTTCC +
Preference number: 5 (lower is better)
Translates to: RQAWVWDQCVPASMVCGVGLSLL*CRAGPS
Trigger: GGAAGGCCCGGCCCGGCACAACAGCAGACTGAGGCC...GACCCCACAGACCATGCTTGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS GCA 90 bp CTTCAGTTTCTTGCGGGCCCCACTGTGGTTCCCCTGCGCCAGGTCTaGTCCTCCCAGGAGCCGGTATGTCTCTGCCACCTCGGGACTGAA +
Preference number: 5 (lower is better)
Translates to: LQFLAGPTVVPLRQV*SSQEPVCLCHLGTE
Trigger: TTCAGTCCCGAGGTGGCAGAGACATACCGGCTCCTGGGAGGAGCAGACCTGGCGCAGGGGAACCACAGTGGGGCCCGCAAGAAACTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000394135.7
ENST00000434594.5
ENST00000459771.5
ENST00000480371.1
ENST00000494567.1
ENST00000558438.1
ENST00000558663.5
CDS-3UTR CAA 90 bp GAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACGGCTTCGAAGCAACCTaGGGGGCCGTGGACAGCATG +
Preference number: 5 (lower is better)
Translates to: ELCVQADAGLTPAQGALNGFEAT*GAVDSM
Trigger: CATGCTGTCCACGGCCCCCAAGGTTGCTTCGAAGCC...GTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp ACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGGCCTCAGTCTGCTGTaGTGCCGGGCCGGGCCTTCC +
Preference number: 5 (lower is better)
Translates to: TPHLCKELCVQADAGLTPGLSLL*CRAGPS
Trigger: GGAAGGCCCGGCCCGGCACAACAGCAGACTGAGGCC...AGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp TGTCCTGAGGGATGCTGGTGCAGAAGGCCACTTTGGCTTTTGATGCCTGCCTTGGGCCTCAGTCTGCTGTaGTGCCGGGCCGGGCCTTCC +
Preference number: 5 (lower is better)
Translates to: CPEGCWCRRPLWLLMPALGLSLL*CRAGPS
Trigger: GGAAGGCCCGGCCCGGCACAACAGCAGACTGAGGCC...CAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCACCAGCATCCCTCAGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000459771.5
ENST00000480371.1
CDS-3UTR CAA 90 bp ATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCGGCTTCGAAGCAACCTaGGGGGCCCTGGGCAAGGAA +
Preference number: 5 (lower is better)
Translates to: MQGAVCTSRCRADSCTGRGFEAT*GALGKE
Trigger: TTCCTTGCCCAGGGCCCCCAAGGTTGCTTCGAAGCC...GCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480371.1
CDS CCA 90 bp GTCTGGATCTGGAGACACTTCTTCAGTTTCTTGCGGGCCCCACTGTaGTTCCCCTGCGCCAGGTCTGCTCCTCCCAGGAGCCGGTATGTC +
Preference number: 5 (lower is better)
Translates to: VWIWRHFFSFLRAPL*FPCARSAPPRSRYV
Trigger: GACATACCGGCTCCTGGGAGGAGCAGACCTGGCGCAGGGGAACCACAGTGGGGCCCGCAAGAAACTGAAGAAGTGTCTCCAGATCCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394132.7
ENST00000394135.7
ENST00000494567.1
ENST00000558663.5
CDS CCA 90 bp GTGGCCCTTGTTATAGCCTTCTTCAGTTTCTTGCGGGCCCCACTGTaGTTCCCCTGCGCCAGGTCTGCTCCTCCCAGGAGCCGGTATGTC +
Preference number: 5 (lower is better)
Translates to: VALVIAFFSFLRAPL*FPCARSAPPRSRYV
Trigger: GACATACCGGCTCCTGGGAGGAGCAGACCTGGCGCAGGGGAACCACAGTGGGGCCCGCAAGAAACTGAAGAAGGCTATAACAAGGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434594.5
CDS-3UTR CAA 90 bp TCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGGGCCAAGGCCTCAGTCTGCTGTaGTGCCGGGCCGGGCCTTCC +
Preference number: 5 (lower is better)
Translates to: SKCGPREAYGLTVACWGQGLSLL*CRAGPS
Trigger: GGAAGGCCCGGCCCGGCACAACAGCAGACTGAGGCC...TTGGCCCCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS GCA 90 bp GTTCCCCTGCGCCAGGTCTGCTCCTCCCAGGAGCCGGTATGTCTCTaGCACCTCGGGACTGAAATCGCCAAATGCTTCCACTTTGGCTTC +
Preference number: 5 (lower is better)
Translates to: VPLRQVCSSQEPVCL*HLGTEIAKCFHFGF
Trigger: GAAGCCAAAGTGGAAGCATTTGGCGATTTCAGTCCCGAGGTGGCAGAGACATACCGGCTCCTGGGAGGAGCAGACCTGGCGCAGGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000394135.7
ENST00000434594.5
ENST00000459771.5
ENST00000480371.1
ENST00000494567.1
ENST00000558438.1
ENST00000558663.5
CDS CCA 90 bp AGGAAACTAAGGTCTCCCTTCTTCAGTTTCTTGCGGGCCCCACTGTaGTTCCCCTGCGCCAGGTCTGCTCCTCCCAGGAGCCGGTATGTC +
Preference number: 5 (lower is better)
Translates to: RKLRSPFFSFLRAPL*FPCARSAPPRSRYV
Trigger: GACATACCGGCTCCTGGGAGGAGCAGACCTGGCGCAGGGGAACCACAGTGGGGCCCGCAAGAAACTGAAGAAGGGAGACCTTAGTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS CCA 90 bp ACTGGTTCCAGCTTTACCTTCTTCAGTTTCTTGCGGGCCCCACTGTaGTTCCCCTGCGCCAGGTCTGCTCCTCCCAGGAGCCGGTATGTC +
Preference number: 5 (lower is better)
Translates to: TGSSFTFFSFLRAPL*FPCARSAPPRSRYV
Trigger: GACATACCGGCTCCTGGGAGGAGCAGACCTGGCGCAGGGGAACCACAGTGGGGCCCGCAAGAAACTGAAGAAGGTAAAGCTGGAACCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CAA 90 bp GCACCCCTACCCCTGGGTGTTCCATCCACCTCGATCTGGCACTGGATCTCCTCGCACTTCTTCAGTTTCTaGCGGGCCCCACTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: APLPLGVPSTSIWHWISSHFFSF*RAPLWF
Trigger: GAACCACAGTGGGGCCCGCAAGAAACTGAAGAAGTG...CGAGGAGATCCAGTGCCAGATCGAGGTGGATGGAACACCCAGGGGTAGGGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394132.7
CDS TCA 90 bp GAATTCTTTCTGCAGCCTTTCACCACTCTCCTGGCCTTGGCTGACTaGGCCAGGGGTGGGCCCTGGATTCAAGCCAGGCCCGTCAGTCTT +
Preference number: 5 (lower is better)
Translates to: EFFLQPFTTLLALAD*ARGGPWIQARPVSL
Trigger: AAGACTGACGGGCCTGGCTTGAATCCAGGGCCCACCCCTGGCTCAGTCAGCCAAGGCCAGGAGAGTGGTGAAAGGCTGCAGAAAGAATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558438.1
CDS-3UTR CAA 90 bp GTACCAGCAAGCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGCTTCGAAGCAACCTaGGGGGCCGTGGACAGCATG +
Preference number: 5 (lower is better)
Translates to: VPASMVCGVSCHAPEEDNGFEAT*GAVDSM
Trigger: CATGCTGTCCACGGCCCCCAAGGTTGCTTCGAAGCC...ATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGCTTGCTGGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp CGACAGGCCTGGGTCTGGGACCAGTGTGTACCAGCAAGCATGGTCTGTGGGGTCCTTTTGATGCCTGCCTaGGCTTCGAAGCAACCTTGG +
Preference number: 5 (lower is better)
Translates to: RQAWVWDQCVPASMVCGVLLMPA*ASKQPW
Trigger: CCAAGGTTGCTTCGAAGCCAAGGCAGGCATCAAAAG...GACCCCACAGACCATGCTTGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp CACACTGCTGATGTCCGACAGGCCTGGGTCTGGGACCAGTGTGTACCAGCAAGCAGGCCACTTTGGCTTTaGATGCCTGCCTTGGCTTCG +
Preference number: 5 (lower is better)
Translates to: HTADVRQAWVWDQCVPASRPLWL*MPALAS
Trigger: CGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCCT...GCTTGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCGGACATCAGCAGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp AGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTGGCCCCAGGGTGGTTTaGATGTCCCACTGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: SIYHPEGHPLSKCGPREAGPRVV*MSHWGL
Trigger: CAGCCCCCAGTGGGACATCAAAACCACCCTGGGGCC...AGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS TCA 90 bp GGTCTGCTCCTCCCAGGAGCCGGTATGTCTCTGCCACCTCGGGACTaGAATCGCCAAATGCTTCCACTTTGGCTTCCAGGGACTCTCTCA +
Preference number: 5 (lower is better)
Translates to: GLLLPGAGMSLPPRD*NRQMLPLWLPGTLS
Trigger: TGAGAGAGTCCCTGGAAGCCAAAGTGGAAGCATTTGGCGATTTCAGTCCCGAGGTGGCAGAGACATACCGGCTCCTGGGAGGAGCAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000394135.7
ENST00000434594.5
ENST00000459771.5
ENST00000480371.1
ENST00000494567.1
ENST00000558663.5
CDS CCA 90 bp AGCTTTCTCTTGAGATTCTTCTTCAGTTTCTTGCGGGCCCCACTGTaGTTCCCCTGCGCCAGGTCTGCTCCTCCCAGGAGCCGGTATGTC +
Preference number: 5 (lower is better)
Translates to: SFLLRFFFSFLRAPL*FPCARSAPPRSRYV
Trigger: GACATACCGGCTCCTGGGAGGAGCAGACCTGGCGCAGGGGAACCACAGTGGGGCCCGCAAGAAACTGAAGAAGAATCTCAAGAGAAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480371.1
CDS-3UTR CAA 90 bp CTAGGCTTTTTCAGGGTGGGGGCCTCAGTCTGCTGTTGTGCCGGGCCGGGCCTTGACCTACTCAGTCAGTaGATACTGTTCCTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: LGFFRVGASVCCCAGPGLDLLSQ*ILFLLP
Trigger: TGGCAGAAGGAACAGTATCAACTGACTGAGTAGGTC...AAGGCCCGGCCCGGCACAACAGCAGACTGAGGCCCCCACCCTGAAAAAGCCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR CAA 90 bp GCTTCCTGTTCGACTTTGCCATCCTCACACGACTATGGCCTCCTTCCAGGGGGCGGAGGCACAATGGAGTaGGCGAGGATTTGTCTGGCT +
Preference number: 5 (lower is better)
Translates to: ASCSTLPSSHDYGLLPGGGGTME*ARICLA
Trigger: AGCCAGACAAATCCTCGCCAACTCCATTGTGCCTCC...GCCCCCTGGAAGGAGGCCATAGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp CCCTCCTACTGGGCTCTTTCTCAAACCCCTTTTCAGGCTCCGAAGAACTCTGAGGGCTTCGAAGCAACCTaGGGGGCCGTGGACAGCATG +
Preference number: 5 (lower is better)
Translates to: PSYWALSQTPFQAPKNSEGFEAT*GAVDSM
Trigger: CATGCTGTCCACGGCCCCCAAGGTTGCTTCGAAGCC...CTCAGAGTTCTTCGGAGCCTGAAAAGGGGTTTGAGAAAGAGCCCAGTAGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp GGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGGGCTTCGAAGCAACCTaGGGGGCCGTGGACAGCATG +
Preference number: 5 (lower is better)
Translates to: GGGDLYSTLNDSAQECPRGFEAT*GAVDSM
Trigger: CATGCTGTCCACGGCCCCCAAGGTTGCTTCGAAGCC...CCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp CTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTGGCTTCGAAGCAACCTaGGGGGCCGTGGACAGCATG +
Preference number: 5 (lower is better)
Translates to: LTPHLCKELCVQADAGLTGFEAT*GAVDSM
Trigger: CATGCTGTCCACGGCCCCCAAGGTTGCTTCGAAGCC...AGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp GTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGGCCTCAGTCTGCTGTaGTGCCGGGCCGGGCCTTCC +
Preference number: 5 (lower is better)
Translates to: VHCPDLTPHLCKELCVQAGLSLL*CRAGPS
Trigger: GGAAGGCCCGGCCCGGCACAACAGCAGACTGAGGCC...TGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp GTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTTGCACTGGATCTCCTCGTaGACATCGTGGAGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: VCTSRCRADSCTGRTELLHWISS*TSWRKA
Trigger: TGCCTTCCTCCACGATGTCAACGAGGAGATCCAGTG...CAACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp CATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTGGCCCCAGGGTGGTTTaGATGTCCCACTGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: HPLSKCGPREAYGLTVACGPRVV*MSHWGL
Trigger: CAGCCCCCAGTGGGACATCAAAACCACCCTGGGGCC...ACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS TCA 90 bp ACAGCAGCATGGGCGACGATGTGTGCCGAGTCTGCTGCCTCCACTTaGGAGGGGCTTCTACTCAGGATGATAAGATGTGCCTGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: TAAWATMCAESAAST*EGLLLRMIRCAWRK
Trigger: CTTCCTCCAGGCACATCTTATCATCCTGAGTAGAAGCCCCTCTCAAGTGGAGGCAGCAGACTCGGCACACATCGTCGCCCATGCTGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000494567.1
ENST00000558663.5
CDS GCA 90 bp CAGGAGCCGGTATGTCTCTGCCACCTCGGGACTGAAATCGCCAAATaGTTCCACTTTGGCTTCCAGGGACTCTCTCAGGATCGAGGTTGC +
Preference number: 5 (lower is better)
Translates to: QEPVCLCHLGTEIAK*FHFGFQGLSQDRGC
Trigger: GCAACCTCGATCCTGAGAGAGTCCCTGGAAGCCAAAGTGGAAGCATTTGGCGATTTCAGTCCCGAGGTGGCAGAGACATACCGGCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000394135.7
ENST00000434594.5
ENST00000459771.5
ENST00000480371.1
ENST00000494567.1
ENST00000558663.5
CDS-3UTR CAA 90 bp CAGGAATGTCCTAGGCTTTTTCAGGGTGGGGGCCTCAGTCTGCTGTTGTGCCGGCAGCTGGAGGTAGCCTaGAGCCAGATTAACATGTGC +
Preference number: 5 (lower is better)
Translates to: QECPRLFQGGGLSLLLCRQLEVA*SQINMC
Trigger: GCACATGTTAATCTGGCTCAAGGCTACCTCCAGCTG...CCGGCACAACAGCAGACTGAGGCCCCCACCCTGAAAAAGCCTAGGACATTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR CAA 90 bp CCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCAGGAGGCACAATGGAGTaGGCGAGGATTTGTCTGGCT +
Preference number: 5 (lower is better)
Translates to: PHLCKELCVQADAGLTPAGGTME*ARICLA
Trigger: AGCCAGACAAATCCTCGCCAACTCCATTGTGCCTCC...TGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp CACACTGCTGATGTCCGACAGGCCTGGGTCTGGGACCAGTGTGTACCAGCAAGCCTCTCAGGATCGAGGTaGCTCTCTCTTTTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: HTADVRQAWVWDQCVPASLSGSR*LSLFVQ
Trigger: CTGGACAAAAAGAGAGAGCAACCTCGATCCTGAGAG...GCTTGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCGGACATCAGCAGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp AGCACACTGCTGATGTCCGACAGGCCTGGGTCTGGGACCAGTGTGTACCAGCAACCAAATGCTTCCACTTaGGCTTCCAGGGACTCTCTC +
Preference number: 5 (lower is better)
Translates to: STLLMSDRPGSGTSVYQQPNAST*ASRDSL
Trigger: GAGAGAGTCCCTGGAAGCCAAAGTGGAAGCATTTGG...TTGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCGGACATCAGCAGTGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp CAGGAATGTCCTAGGCTTTTTCAGGGTGGGGGCCTCAGTCTGCTGTTGTGCCGGCCAAATGCTTCCACTTaGGCTTCCAGGGACTCTCTC +
Preference number: 5 (lower is better)
Translates to: QECPRLFQGGGLSLLLCRPNAST*ASRDSL
Trigger: GAGAGAGTCCCTGGAAGCCAAAGTGGAAGCATTTGG...CCGGCACAACAGCAGACTGAGGCCCCCACCCTGAAAAAGCCTAGGACATTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000459771.5
ENST00000480371.1
CDS-3UTR CAA 90 bp TGGGCTCTTTCTCAAACCCCTTTTCAGGCTCCGAAGAACTCTGAGGCAGGCTGCCCCTTCTTCAGTTTCTaGCGGGCCCCACTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: WALSQTPFQAPKNSEAGCPFFSF*RAPLWF
Trigger: GAACCACAGTGGGGCCCGCAAGAAACTGAAGAAGGG...GCAGCCTGCCTCAGAGTTCTTCGGAGCCTGAAAAGGGGTTTGAGAAAGAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR CAA 90 bp AGCACACTGCTGATGTCCGACAGGCCTGGGTCTGGGACCAGTGTGTACCAGCAACTTTTGATGCCTGCCTaGGCTTCGAAGCAACCTTGG +
Preference number: 5 (lower is better)
Translates to: STLLMSDRPGSGTSVYQQLLMPA*ASKQPW
Trigger: CCAAGGTTGCTTCGAAGCCAAGGCAGGCATCAAAAG...TTGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCGGACATCAGCAGTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp TGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTTGAAGAGGCCACTTTGGCTTTaGATGCCTGCCTTGGCTTCG +
Preference number: 5 (lower is better)
Translates to: CTSRCRADSCTGRTELLKRPLWL*MPALAS
Trigger: CGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCCT...CTTCAACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp CTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTGTGCAGAAGGCCACTTaGGCTTTTGATGCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: LCVQADAGLTPAQGALNCVQKAT*AFDACL
Trigger: AAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCAC...ACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp GAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACCTAGGCGGAGGTGATTaGTACAGCACCCTAAATGAC +
Preference number: 5 (lower is better)
Translates to: ELCVQADAGLTPAQGALNLGGGD*YSTLND
Trigger: GTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAG...GTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp GAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACGGCCAACAGTTGGCCTaGGAAATCTGTATCCTGACT +
Preference number: 5 (lower is better)
Translates to: ELCVQADAGLTPAQGALNGQQLA*EICILT
Trigger: AGTCAGGATACAGATTTCCAAGGCCAACTGTTGGCC...GTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp TGGCTTTTGATGCCTGCCTTGGCTTCGAAGCAACCTTGGGGGCCCTGGGCAAGGTGTTGGGGCCAACAGTaGGCCTTGGAAATCTGTATC +
Preference number: 5 (lower is better)
Translates to: WLLMPALASKQPWGPWARCWGQQ*ALEICI
Trigger: GATACAGATTTCCAAGGCCAACTGTTGGCCCCAACA...CCTTGCCCAGGGCCCCCAAGGTTGCTTCGAAGCCAAGGCAGGCATCAAAAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480371.1
CDS-3UTR CAA 90 bp GTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTTGTCTCACTGTTGCATGTaGGGGCCAACAGTTGGCCTT +
Preference number: 5 (lower is better)
Translates to: VCTSRCRADSCTGRTELLSHCCM*GPTVGL
Trigger: AAGGCCAACTGTTGGCCCCAACATGCAACAGTGAGA...CAACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp CCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACACTGGATCTCCTCGTaGACATCGTGGAGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: PHLCKELCVQADAGLTPAHWISS*TSWRKA
Trigger: TGCCTTCCTCCACGATGTCAACGAGGAGATCCAGTG...TGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp TGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTTGAAGCACTTCTTCAGTTTCTaGCGGGCCCCACTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: CTSRCRADSCTGRTELLKHFFSF*RAPLWF
Trigger: GAACCACAGTGGGGCCCGCAAGAAACTGAAGAAGTG...CTTCAACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394132.7
ENST00000394135.7
ENST00000558663.5
CDS GCA 90 bp CCTGAGATGTTCCTGATCCATGAAGCCGCCTTCAGGAATTCTTTCTaGAGCCTTTCACCACTCTCCTGGCCTTGGCTGACTGAGCCAGGG +
Preference number: 5 (lower is better)
Translates to: PEMFLIHEAAFRNSF*SLSPLSWPWLTEPG
Trigger: CCCTGGCTCAGTCAGCCAAGGCCAGGAGAGTGGTGAAAGGCTGCAGAAAGAATTCCTGAAGGCGGCTTCATGGATCAGGAACATCTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558438.1
CDS-3UTR CAA 90 bp TCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCTTCTCTCGCCTGGAGGAAGTGGTaGATGGATACATCGTGGAGT +
Preference number: 5 (lower is better)
Translates to: SVGSAVTLLRKTMVPASLAWRKW*MDTSWS
Trigger: ACTCCACGATGTATCCATCAACCACTTCCTCCAGGC...GAGAGAAGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp CCAGGCCAAGTCAGGTGTGTCGGCCTCCTGCCCCTCCTACTGGGCTCTTTCTCAATGAGCCATGCTCTCTaGAAAATACTGCTCAGCTAC +
Preference number: 5 (lower is better)
Translates to: PGQVRCVGLLPLLLGSFSMSHAL*KILLSY
Trigger: GTAGCTGAGCAGTATTTTCAAGAGAGCATGGCTCAT...TGAGAAAGAGCCCAGTAGGAGGGGCAGGAGGCCGACACACCTGACTTGGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp CCCTCCTACTGGGCTCTTTCTCAAACCCCTTTTCAGGCTCCGAAGAACTCTGAGCCCTTCTTCAGTTTCTaGCGGGCCCCACTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: PSYWALSQTPFQAPKNSEPFFSF*RAPLWF
Trigger: GAACCACAGTGGGGCCCGCAAGAAACTGAAGAAGGG...CTCAGAGTTCTTCGGAGCCTGAAAAGGGGTTTGAGAAAGAGCCCAGTAGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR CAA 90 bp TGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCTTCTGTGGCCAGAGTCCTTTaGTCCTGCGGTCCATATAAG +
Preference number: 5 (lower is better)
Translates to: WSVGSAVTLLRKTMVPASVARVL*SCGPYK
Trigger: CTTATATGGACCGCAGGACAAAAGGACTCTGGCCAC...AGAAGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp ACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTAGGCCACTTTGGCTTTaGATGCCTGCCTTGGCTTCG +
Preference number: 5 (lower is better)
Translates to: TPHLCKELCVQADAGLTPRPLWL*MPALAS
Trigger: CGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCCT...AGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp TGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTTGAAGGTGCAGAAGGCCACTTaGGCTTTTGATGCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: CTSRCRADSCTGRTELLKVQKAT*AFDACL
Trigger: AAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCAC...CTTCAACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp CCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCTAGGCGGAGGTGATTaGTACAGCACCCTAAATGAC +
Preference number: 5 (lower is better)
Translates to: PMQGAVCTSRCRADSCTGLGGGD*YSTLND
Trigger: GTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAG...CCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp AGCACACTGCTGATGTCCGACAGGCCTGGGTCTGGGACCAGTGTGTACCAGCAATGTTGGGGCCAACAGTaGGCCTTGGAAATCTGTATC +
Preference number: 5 (lower is better)
Translates to: STLLMSDRPGSGTSVYQQCWGQQ*ALEICI
Trigger: GATACAGATTTCCAAGGCCAACTGTTGGCCCCAACA...TTGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCGGACATCAGCAGTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp CAGGAATGTCCTAGGCTTTTTCAGGGTGGGGGCCTCAGTCTGCTGTTGTGCCGGCTTATGGTCTCACTGTaGCATGTTGGGGCCAACAGT +
Preference number: 5 (lower is better)
Translates to: QECPRLFQGGGLSLLLCRLMVSL*HVGANS
Trigger: ACTGTTGGCCCCAACATGCAACAGTGAGACCATAAG...CCGGCACAACAGCAGACTGAGGCCCCCACCCTGAAAAAGCCTAGGACATTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000459771.5
ENST00000480371.1
CDS-3UTR CAA 90 bp TGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCTTCTGAGGCAGGCTGCACTTaGAAAACACATGCTGACAGC +
Preference number: 5 (lower is better)
Translates to: WSVGSAVTLLRKTMVPASEAGCT*KTHADS
Trigger: GCTGTCAGCATGTGTTTTCAAAGTGCAGCCTGCCTC...AGAAGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp GAGGAAGGCACTCAAAGCTTCCTGTTCGACTTTGCCATCCTCACACGACTATGGCCTCAGCTCAGGAGTTaGGGACCAGCCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: EEGTQSFLFDFAILTRLWPQLRS*GPAWAT
Trigger: TGTTGCCCAGGCTGGTCCCAAACTCCTGAGCTGAGG...CCATAGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGCTTTGAGTGCCTTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394132.7
CDS-3UTR CAA 90 bp GCAAGCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCCTCCATAGCAAATTCTaGTCAGTGCTACGCAACGCA +
Preference number: 5 (lower is better)
Translates to: ASMVCGVSCHAPEEDNGPLHSKF*SVLRNA
Trigger: TGCGTTGCGTAGCACTGACAAGAATTTGCTATGGAG...GGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp AGCACACTGCTGATGTCCGACAGGCCTGGGTCTGGGACCAGTGTGTACCAGCAACTCCATAGCAAATTCTaGTCAGTGCTACGCAACGCA +
Preference number: 5 (lower is better)
Translates to: STLLMSDRPGSGTSVYQQLHSKF*SVLRNA
Trigger: TGCGTTGCGTAGCACTGACAAGAATTTGCTATGGAG...TTGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCGGACATCAGCAGTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp CTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTGGAGGCACAATGGAGTaGGCGAGGATTTGTCTGGCT +
Preference number: 5 (lower is better)
Translates to: LTPHLCKELCVQADAGLTGGTME*ARICLA
Trigger: AGCCAGACAAATCCTCGCCAACTCCATTGTGCCTCC...AGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp CGACAGGCCTGGGTCTGGGACCAGTGTGTACCAGCAAGCATGGTCTGTGGGGTCGGGACAAAGCTTCTTTaGACTTCTTCTGACCTTGAT +
Preference number: 5 (lower is better)
Translates to: RQAWVWDQCVPASMVCGVGTKLL*TSSDLD
Trigger: ATCAAGGTCAGAAGAAGTCAAAAGAAGCTTTGTCCC...GACCCCACAGACCATGCTTGCTGGTACACACTGGTCCCAGACCCAGGCCTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp TGTCCTGAGGGATGCTGGTGCAGAAGGCCACTTTGGCTTTTGATGCCTGCCTTGCCAAATGCTTCCACTTaGGCTTCCAGGGACTCTCTC +
Preference number: 5 (lower is better)
Translates to: CPEGCWCRRPLWLLMPALPNAST*ASRDSL
Trigger: GAGAGAGTCCCTGGAAGCCAAAGTGGAAGCATTTGG...CAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCACCAGCATCCCTCAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000459771.5
ENST00000480371.1
CDS-3UTR CAA 90 bp GTACCAGCAAGCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGTGGCCAGAGTCCTTTaGTCCTGCGGTCCATATAAG +
Preference number: 5 (lower is better)
Translates to: VPASMVCGVSCHAPEEDNVARVL*SCGPYK
Trigger: CTTATATGGACCGCAGGACAAAAGGACTCTGGCCAC...ATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGCTTGCTGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp AGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCCTTTTGATGCCTGCCTaGGCTTCGAAGCAACCTTGG +
Preference number: 5 (lower is better)
Translates to: RASTVKMWPTGGLWSHCCLLMPA*ASKQPW
Trigger: CCAAGGTTGCTTCGAAGCCAAGGCAGGCATCAAAAG...GCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp AGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTAGGCCACTTTGGCTTTaGATGCCTGCCTTGGCTTCG +
Preference number: 5 (lower is better)
Translates to: SIYHPEGHPLSKCGPREARPLWL*MPALAS
Trigger: CGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCCT...AGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp CCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACTAGGCGGAGGTGATTaGTACAGCACCCTAAATGAC +
Preference number: 5 (lower is better)
Translates to: PHLCKELCVQADAGLTPALGGGD*YSTLND
Trigger: GTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAG...TGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp TGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCTTCTCTTATGGTCTCACTGTaGCATGTTGGGGCCAACAGT +
Preference number: 5 (lower is better)
Translates to: WSVGSAVTLLRKTMVPASLMVSL*HVGANS
Trigger: ACTGTTGGCCCCAACATGCAACAGTGAGACCATAAG...AGAAGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp AGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTCACTGGATCTCCTCGTaGACATCGTGGAGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: SIYHPEGHPLSKCGPREAHWISS*TSWRKA
Trigger: TGCCTTCCTCCACGATGTCAACGAGGAGATCCAGTG...AGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp CAGTGGAGGCCACAGGAGGGATGCGAAGCAGCAGGGAGTCTGCGGTCTTCCCCCTCCTGCTTTATCAGTTaGGTGATTCTTTGTACAGAT +
Preference number: 5 (lower is better)
Translates to: QWRPQEGCEAAGSLRSSPSCFIS*VILCTD
Trigger: ATCTGTACAAAGAATCACCAAACTGATAAAGCAGGA...GGGGGAAGACCGCAGACTCCCTGCTGCTTCGCATCCCTCCTGTGGCCTCCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp AGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTCACTTCTTCAGTTTCTaGCGGGCCCCACTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: SIYHPEGHPLSKCGPREAHFFSF*RAPLWF
Trigger: GAACCACAGTGGGGCCCGCAAGAAACTGAAGAAGTG...AGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394132.7
ENST00000394135.7
ENST00000558663.5
CDS-3UTR CAA 90 bp GTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGGGCCATTCTTCTTCAGTTTCTaGCGGGCCCCACTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: VKMWPTGGLWSHCCMLGPFFFSF*RAPLWF
Trigger: GAACCACAGTGGGGCCCGCAAGAAACTGAAGAAGAA...TGGCCCCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480371.1
CDS CCA 90 bp CGGAGGCCAGATGATGACTGGACCCAAATCCGACTTCAGTGTTCTTaGGCTCAGTATACTCCTGAGATGTTCCTGATCCATGAAGCCGCC +
Preference number: 5 (lower is better)
Translates to: RRPDDDWTQIRLQCS*AQYTPEMFLIHEAA
Trigger: GGCGGCTTCATGGATCAGGAACATCTCAGGAGTATACTGAGCCCAAGAACACTGAAGTCGGATTTGGGTCCAGTCATCATCTGGCCTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558438.1
CDS-3UTR CAA 90 bp ATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCTGTTGGAATAGGACTTaGCTTTCTCTTCACAGAGGT +
Preference number: 5 (lower is better)
Translates to: MQGAVCTSRCRADSCTGRCWNRT*LSLHRG
Trigger: ACCTCTGTGAAGAGAAAGCAAAGTCCTATTCCAACA...GCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp GAGGAAGGCACTCAAAGCTTCCTGTTCGACTTTGCCATCCTCACACGACTATGGGGAGGCACAATGGAGTaGGCGAGGATTTGTCTGGCT +
Preference number: 5 (lower is better)
Translates to: EEGTQSFLFDFAILTRLWGGTME*ARICLA
Trigger: AGCCAGACAAATCCTCGCCAACTCCATTGTGCCTCC...CCATAGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGCTTTGAGTGCCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp CAGAAGGCCACTTTGGCTTTTGATGCCTGCCTTGGCTTCGAAGCAACCTTGGGGCTCTCAGGATCGAGGTaGCTCTCTCTTTTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: QKATLAFDACLGFEATLGLSGSR*LSLFVQ
Trigger: CTGGACAAAAAGAGAGAGCAACCTCGATCCTGAGAG...CCCCAAGGTTGCTTCGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR CAA 90 bp ATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCCTCTCAGGATCGAGGTaGCTCTCTCTTTTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: ITLKGIHCQNVAHGRLMVLSGSR*LSLFVQ
Trigger: CTGGACAAAAAGAGAGAGCAACCTCGATCCTGAGAG...GACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp CTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCTTTTGATGCCTGCCTaGGCTTCGAAGCAACCTTGG +
Preference number: 5 (lower is better)
Translates to: LTPHLCKELCVQADAGLTLLMPA*ASKQPW
Trigger: CCAAGGTTGCTTCGAAGCCAAGGCAGGCATCAAAAG...AGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp CCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGGTGCAGAAGGCCACTTaGGCTTTTGATGCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: PLSKCGPREAYGLTVACWVQKAT*AFDACL
Trigger: AAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCAC...CCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp AGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGCTTTTTCAGGGTGGGGGCGGCCAACAGTTGGCCTaGGAAATCTGTATCCTGACT +
Preference number: 5 (lower is better)
Translates to: STLNDSAQECPRLFQGGGGQQLA*EICILT
Trigger: AGTCAGGATACAGATTTCCAAGGCCAACTGTTGGCC...GCCCCCACCCTGAAAAAGCCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp CCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGTCTCACTGTTGCATGTaGGGGCCAACAGTTGGCCTT +
Preference number: 5 (lower is better)
Translates to: PLSKCGPREAYGLTVACWSHCCM*GPTVGL
Trigger: AAGGCCAACTGTTGGCCCCAACATGCAACAGTGAGA...CCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp TGTCCTGAGGGATGCTGGTGCAGAAGGCCACTTTGGCTTTTGATGCCTGCCTTGGGGCGCACTGAACTGTaGAAGAGAAGTTTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: CPEGCWCRRPLWLLMPALGRTEL*KRSFSA
Trigger: GGCTGAAAAACTTCTCTTCAACAGTTCAGTGCGCCC...CAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCACCAGCATCCCTCAGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000459771.5
ENST00000480371.1
CDS-3UTR CAA 90 bp TTCTTACAGTTCTGGAAGCTGGGAAGTCTCAAGGTGCCAACAGTTTCATTTCCTGGCCCCAGGGTGGTTTaGATGTCCCACTGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: FLQFWKLGSLKVPTVSFPGPRVV*MSHWGL
Trigger: CAGCCCCCAGTGGGACATCAAAACCACCCTGGGGCC...AGGAAATGAAACTGTTGGCACCTTGAGACTTCCCAGCTTCCAGAACTGTAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp TGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATGGTCCCTGCTTCTGAGCGAATTACACAGTaGTCTTGGCAGCGTGATTTG +
Preference number: 5 (lower is better)
Translates to: WSVGSAVTLLRKTMVPASERITQ*SWQRDL
Trigger: CAAATCACGCTGCCAAGACAACTGTGTAATTCGCTC...AGAAGCAGGGACCATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394132.7
ENST00000459771.5
CDS CCA 90 bp TGGGTGGCCAGAGTCCTTTTGTCCTGCGGTCCATATAAGAGGGTCTaGATCTGGAGACACTGTAGAACACCAAGCAGCTATCATGAGGCT +
Preference number: 5 (lower is better)
Translates to: WVARVLLSCGPYKRV*IWRHCRTPSSYHEA
Trigger: AGCCTCATGATAGCTGCTTGGTGTTCTACAGTGTCTCCAGATCCAGACCCTCTTATATGGACCGCAGGACAAAAGGACTCTGGCCACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262074.8
ENST00000434594.5
ENST00000459771.5
ENST00000490688.2
CDS-3UTR CAA 90 bp GTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGGGCCAGACCTACTCAGTCAGTaGATACTGTTCCTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: VKMWPTGGLWSHCCMLGPDLLSQ*ILFLLP
Trigger: TGGCAGAAGGAACAGTATCAACTGACTGAGTAGGTC...TGGCCCCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp AGCTTCCTGTTCGACTTTGCCATCCTCACACGACTATGGCCTCCTTCCAGGGGGACTTCATCTAGGTGGTaGGATATGTGGGTTTCCTGT +
Preference number: 5 (lower is better)
Translates to: SFLFDFAILTRLWPPSRGTSSRW*DMWVSC
Trigger: ACAGGAAACCCACATATCCAACCACCTAGATGAAGT...CCCCCTGGAAGGAGGCCATAGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp GAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACCTGAAGCAGCTTGTTTaGGAACTTCTTTCTATGAGT +
Preference number: 5 (lower is better)
Translates to: ELCVQADAGLTPAQGALNLKQLV*ELLSMS
Trigger: ACTCATAGAAAGAAGTTCCAAAACAAGCTGCTTCAG...GTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp ATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCAAAGTCTCTCTGCTTTaGTCAAATTCTCTGCAGCTT +
Preference number: 5 (lower is better)
Translates to: MQGAVCTSRCRADSCTGRKVSLL*SNSLQL
Trigger: AAGCTGCAGAGAATTTGACAAAAGCAGAGAGACTTT...GCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp GTCTGGGACCAGTGTGTACCAGCAAGCATGGTCTGTGGGGTCAGCTGTCACGCTATATTCCAAAGCTGCTaGATAGTGGGACAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: VWDQCVPASMVCGVSCHAIFQSC*IVGQSF
Trigger: GAAGCTTTGTCCCACTATCAAGCAGCTTTGGAATAT...AGCGTGACAGCTGACCCCACAGACCATGCTTGCTGGTACACACTGGTCCCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp CTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTGCCTGGAGGAAGTGGTaGATGGATACATCGTGGAGT +
Preference number: 5 (lower is better)
Translates to: LGGGDLYSTLNDSAQECPAWRKW*MDTSWS
Trigger: ACTCCACGATGTATCCATCAACCACTTCCTCCAGGC...AGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp GGGGCCCTGGGCAAGGAAGATCTTTTACAACTCGGGTTTCAAAGGAACTTGTCCCCAAATGCTTCCACTTaGGCTTCCAGGGACTCTCTC +
Preference number: 5 (lower is better)
Translates to: GALGKEDLLQLGFQRNLSPNAST*ASRDSL
Trigger: GAGAGAGTCCCTGGAAGCCAAAGTGGAAGCATTTGG...GGACAAGTTCCTTTGAAACCCGAGTTGTAAAAGATCTTCCTTGCCCAGGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480371.1
CDS-3UTR CAA 90 bp ATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTTTTGATGCCTGCCTaGGCTTCGAAGCAACCTTGG +
Preference number: 5 (lower is better)
Translates to: IAYITLKGIHCQNVAHGRLLMPA*ASKQPW
Trigger: CCAAGGTTGCTTCGAAGCCAAGGCAGGCATCAAAAG...CCTCCCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp AGAAGTTTTTCAGCCACAGTAGTGCTGATGGGTAAAAATTCTTGTTGGCAAGAAGGCCTCAGTCTGCTGTaGTGCCGGGCCGGGCCTTCC +
Preference number: 5 (lower is better)
Translates to: RSFSATVVLMGKNSCWQEGLSLL*CRAGPS
Trigger: GGAAGGCCCGGCCCGGCACAACAGCAGACTGAGGCC...TTCTTGCCAACAAGAATTTTTACCCATCAGCACTACTGTGGCTGAAAAACTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp CCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGGGCCAACAGTTGGCCTaGGAAATCTGTATCCTGACT +
Preference number: 5 (lower is better)
Translates to: PLSKCGPREAYGLTVACWGQQLA*EICILT
Trigger: AGTCAGGATACAGATTTCCAAGGCCAACTGTTGGCC...CCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp GGGGCCCTGGGCAAGGAAGATCTTTTACAACTCGGGTTTCAAAGGAACTTGTCCTCTCACTGTTGCATGTaGGGGCCAACAGTTGGCCTT +
Preference number: 5 (lower is better)
Translates to: GALGKEDLLQLGFQRNLSSHCCM*GPTVGL
Trigger: AAGGCCAACTGTTGGCCCCAACATGCAACAGTGAGA...GGACAAGTTCCTTTGAAACCCGAGTTGTAAAAGATCTTCCTTGCCCAGGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480371.1
CDS-3UTR CAA 90 bp CCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGCTTATGGTCTCACTGTaGCATGTTGGGGCCAACAGT +
Preference number: 5 (lower is better)
Translates to: PLSKCGPREAYGLTVACWLMVSL*HVGANS
Trigger: ACTGTTGGCCCCAACATGCAACAGTGAGACCATAAG...CCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp CGTGGAGGAAGGCACTCAAAGCTTCCTGTTCGACTTTGCCATCCTCACACGACTCTTATGGTCTCACTGTaGCATGTTGGGGCCAACAGT +
Preference number: 5 (lower is better)
Translates to: RGGRHSKLPVRLCHPHTTLMVSL*HVGANS
Trigger: ACTGTTGGCCCCAACATGCAACAGTGAGACCATAAG...AGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGCTTTGAGTGCCTTCCTCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp GGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGGGGCGCACTGAACTGTaGAAGAGAAGTTTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: GGGDLYSTLNDSAQECPRGRTEL*KRSFSA
Trigger: GGCTGAAAAACTTCTCTTCAACAGTTCAGTGCGCCC...CCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp GAGGAAGGCACTCAAAGCTTCCTGTTCGACTTTGCCATCCTCACACGACTATGGGAGGCAGGCTGCACTTaGAAAACACATGCTGACAGC +
Preference number: 5 (lower is better)
Translates to: EEGTQSFLFDFAILTRLWEAGCT*KTHADS
Trigger: GCTGTCAGCATGTGTTTTCAAAGTGCAGCCTGCCTC...CCATAGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGCTTTGAGTGCCTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp GCACCCCTACCCCTGGGTGTTCCATCCACCTCGATCTGGCACTGGATCTCCTCGTCCTGCTTTATCAGTTaGGTGATTCTTTGTACAGAT +
Preference number: 5 (lower is better)
Translates to: APLPLGVPSTSIWHWISSSCFIS*VILCTD
Trigger: ATCTGTACAAAGAATCACCAAACTGATAAAGCAGGA...CGAGGAGATCCAGTGCCAGATCGAGGTGGATGGAACACCCAGGGGTAGGGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp GAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTTCTCTGCTTTTCCTTaGACACTCAATCACTCCTTT +
Preference number: 5 (lower is better)
Translates to: ELCVQADAGLTPAQGALNFSAFP*TLNHSF
Trigger: AAAGGAGTGATTGAGTGTCAAAGGAAAAGCAGAGAA...GTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394132.7
ENST00000394135.7
CDS-3UTR CAA 90 bp AGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGCTTTTTCAGGGTGGGGGCTTTGCAAACCAATCTTaGGGAGCCAGAGGTGGGAAT +
Preference number: 5 (lower is better)
Translates to: STLNDSAQECPRLFQGGGFANQS*GARGGN
Trigger: ATTCCCACCTCTGGCTCCCAAAGATTGGTTTGCAAA...GCCCCCACCCTGAAAAAGCCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394135.7
ENST00000558663.5
CDS-3UTR CAA 90 bp TGTCCTGAGGGATGCTGGTGCAGAAGGCCACTTTGGCTTTTGATGCCTGCCTTGACTTCATCTAGGTGGTaGGATATGTGGGTTTCCTGT +
Preference number: 5 (lower is better)
Translates to: CPEGCWCRRPLWLLMPALTSSRW*DMWVSC
Trigger: ACAGGAAACCCACATATCCAACCACCTAGATGAAGT...CAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCACCAGCATCCCTCAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR CAA 90 bp GGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGCTCCATAGCAAATTCTaGTCAGTGCTACGCAACGCA +
Preference number: 5 (lower is better)
Translates to: GGGDLYSTLNDSAQECPRLHSKF*SVLRNA
Trigger: TGCGTTGCGTAGCACTGACAAGAATTTGCTATGGAG...CCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp CCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCATTTCTGCATGTTGTTTaGCTTGCAGTGACAGTCCTT +
Preference number: 5 (lower is better)
Translates to: PHLCKELCVQADAGLTPAFLHVV*LAVTVL
Trigger: AAGGACTGTCACTGCAAGCAAAACAACATGCAGAAA...TGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp AGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGAGCCATGCTCTCTaGAAAATACTGCTCAGCTAC +
Preference number: 5 (lower is better)
Translates to: RASTVKMWPTGGLWSHCCMSHAL*KILLSY
Trigger: GTAGCTGAGCAGTATTTTCAAGAGAGCATGGCTCAT...GCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp TGTCGTGGCTCTACTGAGTTTATTTTCCCCATCAATACTGGAGGTGGTGCCCTGGTGGCCAGAGTCCTTTaGTCCTGCGGTCCATATAAG +
Preference number: 5 (lower is better)
Translates to: CRGSTEFIFPINTGGGALVARVL*SCGPYK
Trigger: CTTATATGGACCGCAGGACAAAAGGACTCTGGCCAC...CAGGGCACCACCTCCAGTATTGATGGGGAAAATAAACTCAGTAGAGCCACGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp GGGGGCCCTGGGCAAGGAAGATCTTTTACAACTCGGGTTTCAAAGGAACTTGTCCTAGGCGGAGGTGATTaGTACAGCACCCTAAATGAC +
Preference number: 5 (lower is better)
Translates to: GGPGQGRSFTTRVSKELVLGGGD*YSTLND
Trigger: GTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAG...GACAAGTTCCTTTGAAACCCGAGTTGTAAAAGATCTTCCTTGCCCAGGGCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480371.1
CDS-3UTR CAA 90 bp CTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTCTTATGGTCTCACTGTaGCATGTTGGGGCCAACAGT +
Preference number: 5 (lower is better)
Translates to: LGGGDLYSTLNDSAQECPLMVSL*HVGANS
Trigger: ACTGTTGGCCCCAACATGCAACAGTGAGACCATAAG...AGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp CCCTGTCGTGGCTCTACTGAGTTTATTTTCCCCATCAATACTGGAGGTGGTGCCGGGCGCACTGAACTGTaGAAGAGAAGTTTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: PCRGSTEFIFPINTGGGAGRTEL*KRSFSA
Trigger: GGCTGAAAAACTTCTCTTCAACAGTTCAGTGCGCCC...GGCACCACCTCCAGTATTGATGGGGAAAATAAACTCAGTAGAGCCACGACAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp ATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGGCTTCCTGTTCGACTTaGCCATCCTCACACGACTAT +
Preference number: 5 (lower is better)
Translates to: IAYITLKGIHCQNVAHGRASCST*PSSHDY
Trigger: ATAGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGC...CCTCCCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp CTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTGAGCGAATTACACAGTaGTCTTGGCAGCGTGATTTG +
Preference number: 5 (lower is better)
Translates to: LTPHLCKELCVQADAGLTERITQ*SWQRDL
Trigger: CAAATCACGCTGCCAAGACAACTGTGTAATTCGCTC...AGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
CDS-3UTR CAA 90 bp CTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGGGCGCACTGAACTGTGGGTTTCAAAGGAACTaGTCCTTTATGCAAGTTATG +
Preference number: 5 (lower is better)
Translates to: LCVQADAGLTPAQGALNCGFQRN*SFMQVM
Trigger: CATAACTTGCATAAAGGACAAGTTCCTTTGAAACCC...ACAGTTCAGTGCGCCCTGTGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480371.1
CDS TCA 90 bp CAGCCGTGGGTTCAGCTTTCTAGGTCTCTGAATCACAACTGCCAATaGGACCTACTCAGTCAGTTGATACTGTTCCTTCTGCCAGACCTG +
Preference number: 5 (lower is better)
Translates to: QPWVQLSRSLNHNCQ*DLLSQLILFLLPDL
Trigger: CAGGTCTGGCAGAAGGAACAGTATCAACTGACTGAGTAGGTCTCATTGGCAGTTGTGATTCAGAGACCTAGAAAGCTGAACCCACGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000459771.5
ENST00000490671.1
CDS TCA 90 bp ACTGTAGAACACCAAGCAGCTATCATGAGGCTATGGAAGTGTCGCTaGGAGCAGGAAACTAAGGTCTCCCTTCTTCAGTTTCTTGCGGGC +
Preference number: 5 (lower is better)
Translates to: TVEHQAAIMRLWKCR*EQETKVSLLQFLAG
Trigger: GCCCGCAAGAAACTGAAGAAGGGAGACCTTAGTTTCCTGCTCTCAGCGACACTTCCATAGCCTCATGATAGCTGCTTGGTGTTCTACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS TCA 90 bp CAGCCGTGGGTTCAGCTTTCTAGGTCTCTGAATCACAACTGCCAATaGGACCTACTCAGTCAGTTGATACTGTTCCTTCTGCCAGACCGT +
Preference number: 5 (lower is better)
Translates to: QPWVQLSRSLNHNCQ*DLLSQLILFLLPDR
Trigger: ACGGTCTGGCAGAAGGAACAGTATCAACTGACTGAGTAGGTCTCATTGGCAGTTGTGATTCAGAGACCTAGAAAGCTGAACCCACGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558078.5
ENST00000560235.1
CDS GCA 90 bp AATTTCATCAGACATCAGCCCAGGTCCCACAAACCATCCTCTTCTTaGCAGCCGTGGGTTCAGCTTTCTAGGTCTCTGAATCACAACTGC +
Preference number: 5 (lower is better)
Translates to: NFIRHQPRSHKPSSS*QPWVQLSRSLNHNC
Trigger: GCAGTTGTGATTCAGAGACCTAGAAAGCTGAACCCACGGCTGGCAAGAAGAGGATGGTTTGTGGGACCTGGGCTGATGTCTGATGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000459771.5
ENST00000490671.1
ENST00000558078.5
ENST00000560235.1
CDS CCA 90 bp GCCAGAGTCCTTTTGTCCTGCGGTCCATATAAGAGGGTCTGGATCTaGAGACACTGTAGAACACCAAGCAGCTATCATGAGGCTATGGAA +
Preference number: 5 (lower is better)
Translates to: ARVLLSCGPYKRVWI*RHCRTPSSYHEAME
Trigger: TTCCATAGCCTCATGATAGCTGCTTGGTGTTCTACAGTGTCTCCAGATCCAGACCCTCTTATATGGACCGCAGGACAAAAGGACTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262074.8
ENST00000434594.5
ENST00000459771.5
ENST00000490688.2
CDS-3UTR CAA 90 bp TCGTTGACATCGTGGAGGAAGGCACTCAAAGCTTCCTGTTCGACTTTGCCATCCGACCTACTCAGTCAGTaGATACTGTTCCTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: SLTSWRKALKASCSTLPSDLLSQ*ILFLLP
Trigger: TGGCAGAAGGAACAGTATCAACTGACTGAGTAGGTC...GGATGGCAAAGTCGAACAGGAAGCTTTGAGTGCCTTCCTCCACGATGTCAACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp GGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGCTTTTTCAAACCATCCTCTTCTaGCCAGCCGTGGGTTCAGCT +
Preference number: 5 (lower is better)
Translates to: GDLYSTLNDSAQECPRLFQTILF*PAVGSA
Trigger: AGCTGAACCCACGGCTGGCAAGAAGAGGATGGTTTG...AAAAAGCCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp TCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGACAGCTGGAGGTAGCCTaGAGCCAGATTAACATGTGC +
Preference number: 5 (lower is better)
Translates to: SLSRSNSTPMQGAVCTSRQLEVA*SQINMC
Trigger: GCACATGTTAATCTGGCTCAAGGCTACCTCCAGCTG...TCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp AGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCTTTCTGCATGTTGTTTaGCTTGCAGTGACAGTCCTT +
Preference number: 5 (lower is better)
Translates to: RASTVKMWPTGGLWSHCCFLHVV*LAVTVL
Trigger: AAGGACTGTCACTGCAAGCAAAACAACATGCAGAAA...GCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp TGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGAGGCACAATGGAGTaGGCGAGGATTTGTCTGGCT +
Preference number: 5 (lower is better)
Translates to: CFIAYITLKGIHCQNVAHGGTME*ARICLA
Trigger: AGCCAGACAAATCCTCGCCAACTCCATTGTGCCTCC...GTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp TGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCCTCTCAGGATCGAGGTaGCTCTCTCTTTTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: CPDLTPHLCKELCVQADALSGSR*LSLFVQ
Trigger: CTGGACAAAAAGAGAGAGCAACCTCGATCCTGAGAG...GGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp CTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGTGGCCAGAGTCCTTTaGTCCTGCGGTCCATATAAG +
Preference number: 5 (lower is better)
Translates to: LYSIYHPEGHPLSKCGPRVARVL*SCGPYK
Trigger: CTTATATGGACCGCAGGACAAAAGGACTCTGGCCAC...CCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp CTTCCTGAAGTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTCTTTTGATGCCTGCCTaGGCTTCGAAGCAACCTTGG +
Preference number: 5 (lower is better)
Translates to: LPEVHCPDLTPHLCKELCLLMPA*ASKQPW
Trigger: CCAAGGTTGCTTCGAAGCCAAGGCAGGCATCAAAAG...ACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAACTTCAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp CTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGTGCAGAAGGCCACTTaGGCTTTTGATGCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: LYSIYHPEGHPLSKCGPRVQKAT*AFDACL
Trigger: AAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCAC...CCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp TGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGCCAACAGTTGGCCTaGGAAATCTGTATCCTGACT +
Preference number: 5 (lower is better)
Translates to: CPDLTPHLCKELCVQADAGQQLA*EICILT
Trigger: AGTCAGGATACAGATTTCCAAGGCCAACTGTTGGCC...GGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp AGTAGTGACATCTTACACGTTTTTAGCACACTGCTGATGTCCGACAGGCCTGGGTGTTGGGGCCAACAGTaGGCCTTGGAAATCTGTATC +
Preference number: 5 (lower is better)
Translates to: SSDILHVFSTLLMSDRPGCWGQQ*ALEICI
Trigger: GATACAGATTTCCAAGGCCAACTGTTGGCCCCAACA...CCCAGGCCTGTCGGACATCAGCAGTGTGCTAAAAACGTGTAAGATGTCACTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp GTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCATCTCACTGTTGCATGTaGGGGCCAACAGTTGGCCTT +
Preference number: 5 (lower is better)
Translates to: VHCPDLTPHLCKELCVQASHCCM*GPTVGL
Trigger: AAGGCCAACTGTTGGCCCCAACATGCAACAGTGAGA...TGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp TCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATCTCACTGTTGCATGTaGGGGCCAACAGTTGGCCTT +
Preference number: 5 (lower is better)
Translates to: SLSRSNSTPMQGAVCTSRSHCCM*GPTVGL
Trigger: AAGGCCAACTGTTGGCCCCAACATGCAACAGTGAGA...TCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp CATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTGAGCGAATTACACAGTaGTCTTGGCAGCGTGATTTG +
Preference number: 5 (lower is better)
Translates to: HPLSKCGPREAYGLTVACERITQ*SWQRDL
Trigger: CAAATCACGCTGCCAAGACAACTGTGTAATTCGCTC...ACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
CDS CCA 90 bp GGAGAGGCTCACCGTTTCTTTTTCGAGCGAATTACACAGTTGTCTTaGCAGCGTGATTTGCCCTCTGGTTCCTGCTTTATCAGTTTGGTG +
Preference number: 5 (lower is better)
Translates to: GEAHRFFFERITQLS*QRDLPSGSCFISLV
Trigger: CACCAAACTGATAAAGCAGGAACCAGAGGGCAAATCACGCTGCCAAGACAACTGTGTAATTCGCTCGAAAAAGAAACGGTGAGCCTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394132.7
ENST00000394135.7
CDS CCA 90 bp AAGGGGTGCCTCCGTTTCTTTTTCGAGCGAATTACACAGTTGTCTTaGCAGCGTGATTTGCCCTCTGGTTCCTGCTTTATCAGTTTGGTG +
Preference number: 5 (lower is better)
Translates to: KGCLRFFFERITQLS*QRDLPSGSCFISLV
Trigger: CACCAAACTGATAAAGCAGGAACCAGAGGGCAAATCACGCTGCCAAGACAACTGTGTAATTCGCTCGAAAAAGAAACGGAGGCACCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490671.1
CDS CCA 90 bp CCATCTGTGTGCCAGTATTTACACAGCATGGGGCCCCTTAGCTTCTaGTCTCTGCTCTGGTCTAGCCATCTTAAATTCCACTGTCAGTTT +
Preference number: 5 (lower is better)
Translates to: PSVCQYLHSMGPLSF*SLLWSSHLKFHCQF
Trigger: AAACTGACAGTGGAATTTAAGATGGCTAGACCAGAGCAGAGACCAGAAGCTAAGGGGCCCCATGCTGTGTAAATACTGGCACACAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490671.1
CDS-3UTR CAA 90 bp TGTCCTGAGGGATGCTGGTGCAGAAGGCCACTTTGGCTTTTGATGCCTGCCTTGCTGAAGCAGCTTGTTTaGGAACTTCTTTCTATGAGT +
Preference number: 5 (lower is better)
Translates to: CPEGCWCRRPLWLLMPALLKQLV*ELLSMS
Trigger: ACTCATAGAAAGAAGTTCCAAAACAAGCTGCTTCAG...CAAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCACCAGCATCCCTCAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS-3UTR CAA 90 bp GGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGCTTTTTCAGCTGGAGGTAGCCTaGAGCCAGATTAACATGTGC +
Preference number: 5 (lower is better)
Translates to: GDLYSTLNDSAQECPRLFQLEVA*SQINMC
Trigger: GCACATGTTAATCTGGCTCAAGGCTACCTCCAGCTG...AAAAAGCCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp GAAGTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAACAGCTGGAGGTAGCCTaGAGCCAGATTAACATGTGC +
Preference number: 5 (lower is better)
Translates to: EVHCPDLTPHLCKELCVQQLEVA*SQINMC
Trigger: GCACATGTTAATCTGGCTCAAGGCTACCTCCAGCTG...TTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAACTTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp CCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGTTTCTGCATGTTGTTTaGCTTGCAGTGACAGTCCTT +
Preference number: 5 (lower is better)
Translates to: PLSKCGPREAYGLTVACWFLHVV*LAVTVL
Trigger: AAGGACTGTCACTGCAAGCAAAACAACATGCAGAAA...CCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp CTTCCTGAAGTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGGAGTTGGCGAGGATTaGTCTGGCTTTTTCTGCATG +
Preference number: 5 (lower is better)
Translates to: LPEVHCPDLTPHLCKELCGVGED*SGFFCM
Trigger: CATGCAGAAAAAGCCAGACAAATCCTCGCCAACTCC...ACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAACTTCAGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp GTACCAGCAAGCATGGTCTGTGGGGTCAGCTGTCACGCTCCTGAGGAAGACAATAAAGTCTCTCTGCTTTaGTCAAATTCTCTGCAGCTT +
Preference number: 5 (lower is better)
Translates to: VPASMVCGVSCHAPEEDNKVSLL*SNSLQL
Trigger: AAGCTGCAGAGAATTTGACAAAAGCAGAGAGACTTT...ATTGTCTTCCTCAGGAGCGTGACAGCTGACCCCACAGACCATGCTTGCTGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp CTGGATCTCCTCGTTGACATCGTGGAGGAAGGCACTCAAAGCTTCCTGTTCGACATATTCCAAAGCTGCTaGATAGTGGGACAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: LDLLVDIVEEGTQSFLFDIFQSC*IVGQSF
Trigger: GAAGCTTTGTCCCACTATCAAGCAGCTTTGGAATAT...GTCGAACAGGAAGCTTTGAGTGCCTTCCTCCACGATGTCAACGAGGAGATCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp CTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGGCCAACAGTTGGCCTaGGAAATCTGTATCCTGACT +
Preference number: 5 (lower is better)
Translates to: LYSIYHPEGHPLSKCGPRGQQLA*EICILT
Trigger: AGTCAGGATACAGATTTCCAAGGCCAACTGTTGGCC...CCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp CATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTTGGGGCCAACAGTaGGCCTTGGAAATCTGTATC +
Preference number: 5 (lower is better)
Translates to: HFLGGGDLYSTLNDSAQECWGQQ*ALEICI
Trigger: GATACAGATTTCCAAGGCCAACTGTTGGCCCCAACA...TTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp GTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGCTTCCTGTTCGACTTaGCCATCCTCACACGACTAT +
Preference number: 5 (lower is better)
Translates to: VHCPDLTPHLCKELCVQAASCST*PSSHDY
Trigger: ATAGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGC...TGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp CCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGGGCTGACTCCTGCACAGTTTGGTGATTCTTaGTACAGATTGATAACCATG +
Preference number: 5 (lower is better)
Translates to: PHLCKELCVQADAGLTPAQFGDS*YRLITM
Trigger: CATGGTTATCAATCTGTACAAAGAATCACCAAACTG...TGCAGGAGTCAGCCCGGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394132.7
ENST00000394135.7
CDS-3UTR CAA 90 bp GTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGGGCCACGTTGCCTGTTGATATaGAAGTTTGTCAAAGAACGT +
Preference number: 5 (lower is better)
Translates to: VKMWPTGGLWSHCCMLGPRCLLI*KFVKER
Trigger: ACGTTCTTTGACAAACTTCAATATCAACAGGCAACG...TGGCCCCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394135.7
ENST00000558663.5
CDS-3UTR CAA 90 bp AGGGCATCCACTGTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCGTATTTTGTCGAAGTTaGCAAACCAATCTTTGGGAG +
Preference number: 5 (lower is better)
Translates to: RASTVKMWPTGGLWSHCCVFCRS*QTNLWE
Trigger: CTCCCAAAGATTGGTTTGCAAACTTCGACAAAATAC...GCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGACAGTGGATGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394135.7
ENST00000558663.5
CDS CCA 90 bp AGGATGATAAGATGTGCCTGGAGGAAGTGGTTGATGGATACATCGTaGAGTCCCAGGGCTTGCTCTACACCTGCTAATTCTCTCAATATG +
Preference number: 5 (lower is better)
Translates to: RMIRCAWRKWLMDTS*SPRACSTPANSLNM
Trigger: CATATTGAGAGAATTAGCAGGTGTAGAGCAAGCCCTGGGACTCCACGATGTATCCATCAACCACTTCCTCCAGGCACATCTTATCATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000494567.1
ENST00000558663.5
CDS CCA 90 bp GCGAGACTCCATCGTTTCTTTTTCGAGCGAATTACACAGTTGTCTTaGCAGCGTGATTTGCCCTCTGGTTCCTGCTTTATCAGTTTGGTG +
Preference number: 5 (lower is better)
Translates to: ARLHRFFFERITQLS*QRDLPSGSCFISLV
Trigger: CACCAAACTGATAAAGCAGGAACCAGAGGGCAAATCACGCTGCCAAGACAACTGTGTAATTCGCTCGAAAAAGAAACGATGGAGTCTCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000459771.5
ENST00000560772.5
CDS CCA 90 bp CTTCTGCCAGACCGTTTCTTTTTCGAGCGAATTACACAGTTGTCTTaGCAGCGTGATTTGCCCTCTGGTTCCTGCTTTATCAGTTTGGTG +
Preference number: 5 (lower is better)
Translates to: LLPDRFFFERITQLS*QRDLPSGSCFISLV
Trigger: CACCAAACTGATAAAGCAGGAACCAGAGGGCAAATCACGCTGCCAAGACAACTGTGTAATTCGCTCGAAAAAGAAACGGTCTGGCAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558078.5
ENST00000560235.1
CDS-3UTR CAA 90 bp CTGGATCTCCTCGTTGACATCGTGGAGGAAGGCACTCAAAGCTTCCTGTTCGACCTGAAGCAGCTTGTTTaGGAACTTCTTTCTATGAGT +
Preference number: 5 (lower is better)
Translates to: LDLLVDIVEEGTQSFLFDLKQLV*ELLSMS
Trigger: ACTCATAGAAAGAAGTTCCAAAACAAGCTGCTTCAG...GTCGAACAGGAAGCTTTGAGTGCCTTCCTCCACGATGTCAACGAGGAGATCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp AGTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCCTCCATAGCAAATTCTaGTCAGTGCTACGCAACGCA +
Preference number: 5 (lower is better)
Translates to: SSLSRSNSTPMQGAVCTSLHSKF*SVLRNA
Trigger: TGCGTTGCGTAGCACTGACAAGAATTTGCTATGGAG...GCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp CTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTATATTCCAAAGCTGCTaGATAGTGGGACAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: LGGGDLYSTLNDSAQECPIFQSC*IVGQSF
Trigger: GAAGCTTTGTCCCACTATCAAGCAGCTTTGGAATAT...AGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp TGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCCAAATGCTTCCACTTaGGCTTCCAGGGACTCTCTC +
Preference number: 5 (lower is better)
Translates to: CILTVEFHFLGGGDLYSTPNAST*ASRDSL
Trigger: GAGAGAGTCCCTGGAAGCCAAAGTGGAAGCATTTGG...GGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp TTCTTACAGTTCTGGAAGCTGGGAAGTCTCAAGGTGCCAACAGTTTCATTTCCTGTGCAGAAGGCCACTTaGGCTTTTGATGCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: FLQFWKLGSLKVPTVSFPVQKAT*AFDACL
Trigger: AAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCAC...AGGAAATGAAACTGTTGGCACCTTGAGACTTCCCAGCTTCCAGAACTGTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp GGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGCTTTTTCTAGGCGGAGGTGATTaGTACAGCACCCTAAATGAC +
Preference number: 5 (lower is better)
Translates to: GDLYSTLNDSAQECPRLFLGGGD*YSTLND
Trigger: GTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAG...AAAAAGCCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp CTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCAGGCCAACAGTTGGCCTaGGAAATCTGTATCCTGACT +
Preference number: 5 (lower is better)
Translates to: LLYSIYHPEGHPLSKCGPGQQLA*EICILT
Trigger: AGTCAGGATACAGATTTCCAAGGCCAACTGTTGGCC...TGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp GTCAAAATGTGGCCCACGGGAGGCTTATGGTCTCACTGTTGCATGTTGGGGCCATGGTATCGTTGCCTGTaGATATTGAAGTTTGTCAAA +
Preference number: 5 (lower is better)
Translates to: VKMWPTGGLWSHCCMLGPWYRCL*ILKFVK
Trigger: TTTGACAAACTTCAATATCAACAGGCAACGATACCA...TGGCCCCAACATGCAACAGTGAGACCATAAGCCTCCCGTGGGCCACATTTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394135.7
ENST00000558663.5
CDS-3UTR CAA 90 bp GTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCATTTGCAAACCAATCTTaGGGAGCCAGAGGTGGGAAT +
Preference number: 5 (lower is better)
Translates to: VHCPDLTPHLCKELCVQAFANQS*GARGGN
Trigger: ATTCCCACCTCTGGCTCCCAAAGATTGGTTTGCAAA...TGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394135.7
ENST00000558663.5
CDS-3UTR CAA 90 bp ATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCCAGCTGGAGGTAGCCTaGAGCCAGATTAACATGTGC +
Preference number: 5 (lower is better)
Translates to: ICILTVEFHFLGGGDLYSQLEVA*SQINMC
Trigger: GCACATGTTAATCTGGCTCAAGGCTACCTCCAGCTG...GCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp TTCTTACAGTTCTGGAAGCTGGGAAGTCTCAAGGTGCCAACAGTTTCATTTCCTGGAGTTGGCGAGGATTaGTCTGGCTTTTTCTGCATG +
Preference number: 5 (lower is better)
Translates to: FLQFWKLGSLKVPTVSFPGVGED*SGFFCM
Trigger: CATGCAGAAAAAGCCAGACAAATCCTCGCCAACTCC...AGGAAATGAAACTGTTGGCACCTTGAGACTTCCCAGCTTCCAGAACTGTAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp CATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAAATGAGCCATGCTCTCTaGAAAATACTGCTCAGCTAC +
Preference number: 5 (lower is better)
Translates to: HFLGGGDLYSTLNDSAQEMSHAL*KILLSY
Trigger: GTAGCTGAGCAGTATTTTCAAGAGAGCATGGCTCAT...TTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp CTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAAATCCAAATGCTTCCACTTaGGCTTCCAGGGACTCTCTC +
Preference number: 5 (lower is better)
Translates to: LTVEFHFLGGGDLYSTLNPNAST*ASRDSL
Trigger: GAGAGAGTCCCTGGAAGCCAAAGTGGAAGCATTTGG...ATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp TCAGCCACAGTAGTGCTGATGGGTAAAAATTCTTGTTGGCAAGAAAAACCACTTAGGCCACTTTGGCTTTaGATGCCTGCCTTGGCTTCG +
Preference number: 5 (lower is better)
Translates to: SATVVLMGKNSCWQEKPLRPLWL*MPALAS
Trigger: CGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCCT...AAGTGGTTTTTCTTGCCAACAAGAATTTTTACCCATCAGCACTACTGTGGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp ATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAGGGCGCACTGAACTGTaGAAGAGAAGTTTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: ILTVEFHFLGGGDLYSTLGRTEL*KRSFSA
Trigger: GGCTGAAAAACTTCTCTTCAACAGTTCAGTGCGCCC...TAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS TCA 90 bp CCTCCGTTTCTTTTTCGAGCGAATTACACAGTTGTCTTGGCAGCGTaGTTTGCCCTCTGGTTCCTGCTTTATCAGTTTGGTGATTCTTTG +
Preference number: 5 (lower is better)
Translates to: PPFLFRANYTVVLAA*FALWFLLYQFGDSL
Trigger: CAAAGAATCACCAAACTGATAAAGCAGGAACCAGAGGGCAAATCACGCTGCCAAGACAACTGTGTAATTCGCTCGAAAAAGAAACGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490671.1
CDS CCA 90 bp TTTCCACTTGGTTCTAGATTCTACACCCCATGTCCTGAACTTCCTTaGCTCCCATACTTCCAATCACACTTCCTAAGTCATCCATCAGCA +
Preference number: 5 (lower is better)
Translates to: FPLGSRFYTPCPELP*LPYFQSHFLSHPSA
Trigger: TGCTGATGGATGACTTAGGAAGTGTGATTGGAAGTATGGGAGCCAAGGAAGTTCAGGACATGGGGTGTAGAATCTAGAACCAAGTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494567.1
CDS-3UTR CAA 90 bp TGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACACTTCATCTAGGTGGTaGGATATGTGGGTTTCCTGT +
Preference number: 5 (lower is better)
Translates to: CFIAYITLKGIHCQNVAHTSSRW*DMWVSC
Trigger: ACAGGAAACCCACATATCCAACCACCTAGATGAAGT...GTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp AGTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCTGTTGGAATAGGACTTaGCTTTCTCTTCACAGAGGT +
Preference number: 5 (lower is better)
Translates to: SSLSRSNSTPMQGAVCTSCWNRT*LSLHRG
Trigger: ACCTCTGTGAAGAGAAAGCAAAGTCCTATTCCAACA...GCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp CTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGTGTTGGAATAGGACTTaGCTTTCTCTTCACAGAGGT +
Preference number: 5 (lower is better)
Translates to: LYSIYHPEGHPLSKCGPRCWNRT*LSLHRG
Trigger: ACCTCTGTGAAGAGAAAGCAAAGTCCTATTCCAACA...CCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp AGTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCTTTCTGCATGTTGTTTaGCTTGCAGTGACAGTCCTT +
Preference number: 5 (lower is better)
Translates to: SSLSRSNSTPMQGAVCTSFLHVV*LAVTVL
Trigger: AAGGACTGTCACTGCAAGCAAAACAACATGCAGAAA...GCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp TCCCTATTAGCCTCCTATAAGAAAGGACTTCCTGAAGTTCACTGTCCAGATCTAGGAGTTGGCGAGGATTaGTCTGGCTTTTTCTGCATG +
Preference number: 5 (lower is better)
Translates to: SLLASYKKGLPEVHCPDLGVGED*SGFFCM
Trigger: CATGCAGAAAAAGCCAGACAAATCCTCGCCAACTCC...TAGATCTGGACAGTGAACTTCAGGAAGTCCTTTCTTATAGGAGGCTAATAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp CTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACGGGGGACAAAGCTTCTTTaGACTTCTTCTGACCTTGAT +
Preference number: 5 (lower is better)
Translates to: LYSIYHPEGHPLSKCGPRGTKLL*TSSDLD
Trigger: ATCAAGGTCAGAAGAAGTCAAAAGAAGCTTTGTCCC...CCGTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp GTGATAGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAGCCTGGAGGAAGTGGTaGATGGATACATCGTGGAGT +
Preference number: 5 (lower is better)
Translates to: VIENCFIAYITLKGIHCQAWRKW*MDTSWS
Trigger: ACTCCACGATGTATCCATCAACCACTTCCTCCAGGC...TTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCTATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp TCAGCCACAGTAGTGCTGATGGGTAAAAATTCTTGTTGGCAAGAAAAACCACTTGCCTGGAGGAAGTGGTaGATGGATACATCGTGGAGT +
Preference number: 5 (lower is better)
Translates to: SATVVLMGKNSCWQEKPLAWRKW*MDTSWS
Trigger: ACTCCACGATGTATCCATCAACCACTTCCTCCAGGC...AAGTGGTTTTTCTTGCCAACAAGAATTTTTACCCATCAGCACTACTGTGGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp GGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTAGGCTTTTTATGAGCCATGCTCTCTaGAAAATACTGCTCAGCTAC +
Preference number: 5 (lower is better)
Translates to: GDLYSTLNDSAQECPRLFMSHAL*KILLSY
Trigger: GTAGCTGAGCAGTATTTTCAAGAGAGCATGGCTCAT...AAAAAGCCTAGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp GAAATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACGTGGCCAGAGTCCTTTaGTCCTGCGGTCCATATAAG +
Preference number: 5 (lower is better)
Translates to: EICILTVEFHFLGGGDLYVARVL*SCGPYK
Trigger: CTTATATGGACCGCAGGACAAAAGGACTCTGGCCAC...GTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp AGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTAGGCCACTTTGGCTTTaGATGCCTGCCTTGGCTTCG +
Preference number: 5 (lower is better)
Translates to: RKLLYSIYHPEGHPLSKCRPLWL*MPALAS
Trigger: CGAAGCCAAGGCAGGCATCAAAAGCCAAAGTGGCCT...ACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp TTGGAAATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTCTCACTGTTGCATGTaGGGGCCAACAGTTGGCCTT +
Preference number: 5 (lower is better)
Translates to: LEICILTVEFHFLGGGDLSHCCM*GPTVGL
Trigger: AAGGCCAACTGTTGGCCCCAACATGCAACAGTGAGA...CAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGATTTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp CTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAAATCTTATGGTCTCACTGTaGCATGTTGGGGCCAACAGT +
Preference number: 5 (lower is better)
Translates to: LTVEFHFLGGGDLYSTLNLMVSL*HVGANS
Trigger: ACTGTTGGCCCCAACATGCAACAGTGAGACCATAAG...ATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp ATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCGGGCGCACTGAACTGTaGAAGAGAAGTTTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: ICILTVEFHFLGGGDLYSGRTEL*KRSFSA
Trigger: GGCTGAAAAACTTCTCTTCAACAGTTCAGTGCGCCC...GCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp CTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTTCCTGCTTTATCAGTTaGGTGATTCTTTGTACAGAT +
Preference number: 5 (lower is better)
Translates to: LGGGDLYSTLNDSAQECPSCFIS*VILCTD
Trigger: ATCTGTACAAAGAATCACCAAACTGATAAAGCAGGA...AGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
CDS-3UTR CAA 90 bp TCGTTGACATCGTGGAGGAAGGCACTCAAAGCTTCCTGTTCGACTTTGCCATCCGCAAAACTCTGTCTTTaGAGTTACATGCTTATCATC +
Preference number: 5 (lower is better)
Translates to: SLTSWRKALKASCSTLPSAKLCL*SYMLII
Trigger: GATGATAAGCATGTAACTCAAAAGACAGAGTTTTGC...GGATGGCAAAGTCGAACAGGAAGCTTTGAGTGCCTTCCTCCACGATGTCAACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394132.7
CDS-3UTR CAA 90 bp CTAGGCGGAGGTGATTTGTACAGCACCCTAAATGACAGTGCCCAGGAATGTCCTTGGTATCGTTGCCTGTaGATATTGAAGTTTGTCAAA +
Preference number: 5 (lower is better)
Translates to: LGGGDLYSTLNDSAQECPWYRCL*ILKFVK
Trigger: TTTGACAAACTTCAATATCAACAGGCAACGATACCA...AGGACATTCCTGGGCACTGTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394135.7
ENST00000558663.5
CDS-3UTR CAA 90 bp TGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGATGCCGTATTTTGTCGAAGTTaGCAAACCAATCTTTGGGAG +
Preference number: 5 (lower is better)
Translates to: CPDLTPHLCKELCVQADAVFCRS*QTNLWE
Trigger: CTCCCAAAGATTGGTTTGCAAACTTCGACAAAATAC...GGCATCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394135.7
ENST00000558663.5
CDS TCA 90 bp TCACCGTTTCTTTTTCGAGCGAATTACACAGTTGTCTTGGCAGCGTaGTTTGCCCTCTGGTTCCTGCTTTATCAGTTTGGTGATTCTTTG +
Preference number: 5 (lower is better)
Translates to: SPFLFRANYTVVLAA*FALWFLLYQFGDSL
Trigger: CAAAGAATCACCAAACTGATAAAGCAGGAACCAGAGGGCAAATCACGCTGCCAAGACAACTGTGTAATTCGCTCGAAAAAGAAACGGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394132.7
ENST00000394135.7
CDS TCA 90 bp ACTTCTAAAGTTTCATTTAAAAGAACCACCACAAGGGAGAGAAATTaGCCTTGGAGAGGGGAGGGAGAGCCTAGTCTCGTGTTAGTACTG +
Preference number: 5 (lower is better)
Translates to: TSKVSFKRTTTRERN*PWRGEGEPSLVLVL
Trigger: CAGTACTAACACGAGACTAGGCTCTCCCTCCCCTCTCCAAGGTCAATTTCTCTCCCTTGTGGTGGTTCTTTTAAATGAAACTTTAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS TCA 90 bp CCATCGTTTCTTTTTCGAGCGAATTACACAGTTGTCTTGGCAGCGTaGTTTGCCCTCTGGTTCCTGCTTTATCAGTTTGGTGATTCTTTG +
Preference number: 5 (lower is better)
Translates to: PSFLFRANYTVVLAA*FALWFLLYQFGDSL
Trigger: CAAAGAATCACCAAACTGATAAAGCAGGAACCAGAGGGCAAATCACGCTGCCAAGACAACTGTGTAATTCGCTCGAAAAAGAAACGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000459771.5
ENST00000560772.5
CDS TCA 90 bp AGACCGTTTCTTTTTCGAGCGAATTACACAGTTGTCTTGGCAGCGTaGTTTGCCCTCTGGTTCCTGCTTTATCAGTTTGGTGATTCTTTG +
Preference number: 5 (lower is better)
Translates to: RPFLFRANYTVVLAA*FALWFLLYQFGDSL
Trigger: CAAAGAATCACCAAACTGATAAAGCAGGAACCAGAGGGCAAATCACGCTGCCAAGACAACTGTGTAATTCGCTCGAAAAAGAAACGGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558078.5
ENST00000560235.1
CDS-3UTR CAA 90 bp GTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCACTGAAGCAGCTTGTTTaGGAACTTCTTTCTATGAGT +
Preference number: 5 (lower is better)
Translates to: VHCPDLTPHLCKELCVQALKQLV*ELLSMS
Trigger: ACTCATAGAAAGAAGTTCCAAAACAAGCTGCTTCAG...TGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp GAAGTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAATTTCTGCATGTTGTTTaGCTTGCAGTGACAGTCCTT +
Preference number: 5 (lower is better)
Translates to: EVHCPDLTPHLCKELCVQFLHVV*LAVTVL
Trigger: AAGGACTGTCACTGCAAGCAAAACAACATGCAGAAA...TTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp TCAGCCACAGTAGTGCTGATGGGTAAAAATTCTTGTTGGCAAGAAAAACCACTTGGAGTTGGCGAGGATTaGTCTGGCTTTTTCTGCATG +
Preference number: 5 (lower is better)
Translates to: SATVVLMGKNSCWQEKPLGVGED*SGFFCM
Trigger: CATGCAGAAAAAGCCAGACAAATCCTCGCCAACTCC...AAGTGGTTTTTCTTGCCAACAAGAATTTTTACCCATCAGCACTACTGTGGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp TCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAAGCAGAAAAGTCTCTCTGCTTTaGTCAAATTCTCTGCAGCTT +
Preference number: 5 (lower is better)
Translates to: SLSRSNSTPMQGAVCTSRKVSLL*SNSLQL
Trigger: AAGCTGCAGAGAATTTGACAAAAGCAGAGAGACTTT...TCTGCTTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp CTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCAGGGACAAAGCTTCTTTaGACTTCTTCTGACCTTGAT +
Preference number: 5 (lower is better)
Translates to: LLYSIYHPEGHPLSKCGPGTKLL*TSSDLD
Trigger: ATCAAGGTCAGAAGAAGTCAAAAGAAGCTTTGTCCC...TGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp GATAGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAAGCCTGGAGGAAGTGGTaGATGGATACATCGTGGAGT +
Preference number: 5 (lower is better)
Translates to: DRKLLYSIYHPEGHPLSKAWRKW*MDTSWS
Trigger: ACTCCACGATGTATCCATCAACCACTTCCTCCAGGC...TTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp AGAAGTTTTTCAGCCACAGTAGTGCTGATGGGTAAAAATTCTTGTTGGCAAGAAGTGCAGAAGGCCACTTaGGCTTTTGATGCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: RSFSATVVLMGKNSCWQEVQKAT*AFDACL
Trigger: AAGGCAGGCATCAAAAGCCAAAGTGGCCTTCTGCAC...TTCTTGCCAACAAGAATTTTTACCCATCAGCACTACTGTGGCTGAAAAACTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp TTGGAAATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGGGGCGCACTGAACTGTaGAAGAGAAGTTTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: LEICILTVEFHFLGGGDLGRTEL*KRSFSA
Trigger: GGCTGAAAAACTTCTCTTCAACAGTTCAGTGCGCCC...CAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGATTTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp AGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGAGGCAGGCTGCACTTaGAAAACACATGCTGACAGC +
Preference number: 5 (lower is better)
Translates to: RKLLYSIYHPEGHPLSKCEAGCT*KTHADS
Trigger: GCTGTCAGCATGTGTTTTCAAAGTGCAGCCTGCCTC...ACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS-3UTR CAA 90 bp TCAGCCACAGTAGTGCTGATGGGTAAAAATTCTTGTTGGCAAGAAAAACCACTTGCTTCCTGTTCGACTTaGCCATCCTCACACGACTAT +
Preference number: 5 (lower is better)
Translates to: SATVVLMGKNSCWQEKPLASCST*PSSHDY
Trigger: ATAGTCGTGTGAGGATGGCAAAGTCGAACAGGAAGC...AAGTGGTTTTTCTTGCCAACAAGAATTTTTACCCATCAGCACTACTGTGGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
CDS TCA 90 bp TCTTCGTTTCTTTTTCGAGCGAATTACACAGTTGTCTTGGCAGCGTaGTTTGCCCTCTGGTTCCTGCTTTATCAGTTTGGTGATTCTTTG +
Preference number: 5 (lower is better)
Translates to: SSFLFRANYTVVLAA*FALWFLLYQFGDSL
Trigger: CAAAGAATCACCAAACTGATAAAGCAGGAACCAGAGGGCAAATCACGCTGCCAAGACAACTGTGTAATTCGCTCGAAAAAGAAACGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560860.5
CDS CCA 90 bp ATACATTGTCTTCGTTTCTTTTTCGAGCGAATTACACAGTTGTCTTaGCAGCGTGATTTGCCCTCTGGTTCCTGCTTTATCAGTTTGGTG +
Preference number: 5 (lower is better)
Translates to: IHCLRFFFERITQLS*QRDLPSGSCFISLV
Trigger: CACCAAACTGATAAAGCAGGAACCAGAGGGCAAATCACGCTGCCAAGACAACTGTGTAATTCGCTCGAAAAAGAAACGAAGACAATGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560860.5
CDS-3UTR CAA 90 bp CTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTAAATACTTCATCTAGGTGGTaGGATATGTGGGTTTCCTGT +
Preference number: 5 (lower is better)
Translates to: LTVEFHFLGGGDLYSTLNTSSRW*DMWVSC
Trigger: ACAGGAAACCCACATATCCAACCACCTAGATGAAGT...ATTTAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp ATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCCTATGTTGGAATAGGACTTaGCTTTCTCTTCACAGAGGT +
Preference number: 5 (lower is better)
Translates to: ILTVEFHFLGGGDLYSTLCWNRT*LSLHRG
Trigger: ACCTCTGTGAAGAGAAAGCAAAGTCCTATTCCAACA...TAGGGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp CTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACCACACAGCTGGAGGTAGCCTaGAGCCAGATTAACATGTGC +
Preference number: 5 (lower is better)
Translates to: LRGLLCLLPKKYQVRSTTQLEVA*SQINMC
Trigger: GCACATGTTAATCTGGCTCAAGGCTACCTCCAGCTG...TGTGGTAGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CAA 90 bp AAAAAGGTAAGATTAGATCCATTCCTCATGCCATCCACACAAATAAACTCCAAAGGAGGCACAATGGAGTaGGCGAGGATTTGTCTGGCT +
Preference number: 5 (lower is better)
Translates to: KKVRLDPFLMPSTQINSKGGTME*ARICLA
Trigger: AGCCAGACAAATCCTCGCCAACTCCATTGTGCCTCC...TTTGGAGTTTATTTGTGTGGATGGCATGAGGAATGGATCTAATCTTACCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CAA 90 bp TGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGCCCACAAAGTCTCTCTGCTTTaGTCAAATTCTCTGCAGCTT +
Preference number: 5 (lower is better)
Translates to: CFIAYITLKGIHCQNVAHKVSLL*SNSLQL
Trigger: AAGCTGCAGAGAATTTGACAAAAGCAGAGAGACTTT...GTGGGCCACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp TGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACCCCAAATGCTTCCACTTaGGCTTCCAGGGACTCTCTC +
Preference number: 5 (lower is better)
Translates to: CLRGLLCLLPKKYQVRSTPNAST*ASRDSL
Trigger: GAGAGAGTCCCTGGAAGCCAAAGTGGAAGCATTTGG...GGTAGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CAA 90 bp GATAGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAACTAGGCGGAGGTGATTaGTACAGCACCCTAAATGAC +
Preference number: 5 (lower is better)
Translates to: DRKLLYSIYHPEGHPLSKLGGGD*YSTLND
Trigger: GTCATTTAGGGTGCTGTACAAATCACCTCCGCCTAG...TTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp GAAGTTCACTGTCCAGATCTAACTCCACACCTATGCAAGGAGCTGTGTGTACAACGTTGCCTGTTGATATaGAAGTTTGTCAAAGAACGT +
Preference number: 5 (lower is better)
Translates to: EVHCPDLTPHLCKELCVQRCLLI*KFVKER
Trigger: ACGTTCTTTGACAAACTTCAATATCAACAGGCAACG...TTGTACACACAGCTCCTTGCATAGGTGTGGAGTTAGATCTGGACAGTGAACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394135.7
ENST00000558663.5
CDS-3UTR CAA 90 bp AAAAAGGTAAGATTAGATCCATTCCTCATGCCATCCACACAAATAAACTCCAAAACCTTCTTCAGTTTCTaGCGGGCCCCACTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: KKVRLDPFLMPSTQINSKTFFSF*RAPLWF
Trigger: GAACCACAGTGGGGCCCGCAAGAAACTGAAGAAGGT...TTTGGAGTTTATTTGTGTGGATGGCATGAGGAATGGATCTAATCTTACCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS TCA 90 bp AGAGTAAAGCTCTGCCCATGGTATGGAAAAGCTCAATGGAAAACTTaGAAACATCTGTATTCTCACTATAGGGAGGCACAATGGAGTTGG +
Preference number: 5 (lower is better)
Translates to: RVKLCPWYGKAQWKT*KHLYSHYREAQWSW
Trigger: CCAACTCCATTGTGCCTCCCTATAGTGAGAATACAGATGTTTTCAAGTTTTCCATTGAGCTTTTCCATACCATGGGCAGAGCTTTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000494567.1
ENST00000558663.5
ENST00000560279.5
ENST00000561365.5
CDS CCA 90 bp ACTCCAGGCAAAAGAATGAATGATAGAGCACTCACCAATAGCGAGTaGAGAAGAGTATTTTGTCGAAGTTTGCAAACCAATCTTTGGGAG +
Preference number: 5 (lower is better)
Translates to: TPGKRMNDRALTNSE*RRVFCRSLQTNLWE
Trigger: CTCCCAAAGATTGGTTTGCAAACTTCGACAAAATACTCTTCTCCACTCGCTATTGGTGAGTGCTCTATCATTCATTCTTTTGCCTGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394135.7
CDS-3UTR CAA 90 bp GAAATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACACTTCATCTAGGTGGTaGGATATGTGGGTTTCCTGT +
Preference number: 5 (lower is better)
Translates to: EICILTVEFHFLGGGDLYTSSRW*DMWVSC
Trigger: ACAGGAAACCCACATATCCAACCACCTAGATGAAGT...GTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp GATAGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAACTCCATAGCAAATTCTaGTCAGTGCTACGCAACGCA +
Preference number: 5 (lower is better)
Translates to: DRKLLYSIYHPEGHPLSKLHSKF*SVLRNA
Trigger: TGCGTTGCGTAGCACTGACAAGAATTTGCTATGGAG...TTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp CTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACCACAGGAGTTGGCGAGGATTaGTCTGGCTTTTTCTGCATG +
Preference number: 5 (lower is better)
Translates to: LRGLLCLLPKKYQVRSTTGVGED*SGFFCM
Trigger: CATGCAGAAAAAGCCAGACAAATCCTCGCCAACTCC...TGTGGTAGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CAA 90 bp GGCAAGAAAAACCACTTAGGTGATAGAAAACTGCTTTATAGCATATATCACCCTGGAGTTGGCGAGGATTaGTCTGGCTTTTTCTGCATG +
Preference number: 5 (lower is better)
Translates to: GKKNHLGDRKLLYSIYHPGVGED*SGFFCM
Trigger: CATGCAGAAAAAGCCAGACAAATCCTCGCCAACTCC...AGGGTGATATATGCTATAAAGCAGTTTTCTATCACCTAAGTGGTTTTTCTTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp TGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACAGCACCAAAGTCTCTCTGCTTTaGTCAAATTCTCTGCAGCTT +
Preference number: 5 (lower is better)
Translates to: CILTVEFHFLGGGDLYSTKVSLL*SNSLQL
Trigger: AAGCTGCAGAGAATTTGACAAAAGCAGAGAGACTTT...GGTGCTGTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp AAAAAGGTAAGATTAGATCCATTCCTCATGCCATCCACACAAATAAACTCCAAAGCCTGGAGGAAGTGGTaGATGGATACATCGTGGAGT +
Preference number: 5 (lower is better)
Translates to: KKVRLDPFLMPSTQINSKAWRKW*MDTSWS
Trigger: ACTCCACGATGTATCCATCAACCACTTCCTCCAGGC...TTTGGAGTTTATTTGTGTGGATGGCATGAGGAATGGATCTAATCTTACCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CAA 90 bp GGCAAGAAAAACCACTTAGGTGATAGAAAACTGCTTTATAGCATATATCACCCTTGTTGGGGCCAACAGTaGGCCTTGGAAATCTGTATC +
Preference number: 5 (lower is better)
Translates to: GKKNHLGDRKLLYSIYHPCWGQQ*ALEICI
Trigger: GATACAGATTTCCAAGGCCAACTGTTGGCCCCAACA...AGGGTGATATATGCTATAAAGCAGTTTTCTATCACCTAAGTGGTTTTTCTTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS CCA 90 bp CAGAGTAGAAATACAGAAACAAAAGTCTCCTTACCTCATGACTGTTaGAATAGGACTTTGCTTTCTCTTCACAGAGGTGGAGTTTCTCTC +
Preference number: 5 (lower is better)
Translates to: QSRNTETKVSLPHDC*NRTLLSLHRGGVSL
Trigger: GAGAGAAACTCCACCTCTGTGAAGAGAAAGCAAAGTCCTATTCCAACAGTCATGAGGTAAGGAGACTTTTGTTTCTGTATTTCTACTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468436.1
CDS-3UTR CAA 90 bp GAAATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACTGTTGGAATAGGACTTaGCTTTCTCTTCACAGAGGT +
Preference number: 5 (lower is better)
Translates to: EICILTVEFHFLGGGDLYCWNRT*LSLHRG
Trigger: ACCTCTGTGAAGAGAAAGCAAAGTCCTATTCCAACA...GTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp TCAGCCACAGTAGTGCTGATGGGTAAAAATTCTTGTTGGCAAGAAAAACCACTTGGGACAAAGCTTCTTTaGACTTCTTCTGACCTTGAT +
Preference number: 5 (lower is better)
Translates to: SATVVLMGKNSCWQEKPLGTKLL*TSSDLD
Trigger: ATCAAGGTCAGAAGAAGTCAAAAGAAGCTTTGTCCC...AAGTGGTTTTTCTTGCCAACAAGAATTTTTACCCATCAGCACTACTGTGGCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp TCAGCCACAGTAGTGCTGATGGGTAAAAATTCTTGTTGGCAAGAAAAACCACTTATATTCCAAAGCTGCTaGATAGTGGGACAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: SATVVLMGKNSCWQEKPLIFQSC*IVGQSF
Trigger: GAAGCTTTGTCCCACTATCAAGCAGCTTTGGAATAT...AAGTGGTTTTTCTTGCCAACAAGAATTTTTACCCATCAGCACTACTGTGGCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp AAAAAGGTAAGATTAGATCCATTCCTCATGCCATCCACACAAATAAACTCCAAACTCTCAGGATCGAGGTaGCTCTCTCTTTTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: KKVRLDPFLMPSTQINSKLSGSR*LSLFVQ
Trigger: CTGGACAAAAAGAGAGAGCAACCTCGATCCTGAGAG...TTTGGAGTTTATTTGTGTGGATGGCATGAGGAATGGATCTAATCTTACCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CAA 90 bp GTTGGCAAGAAAAACCACTTAGGTGATAGAAAACTGCTTTATAGCATATATCACTGTTGGGGCCAACAGTaGGCCTTGGAAATCTGTATC +
Preference number: 5 (lower is better)
Translates to: VGKKNHLGDRKLLYSIYHCWGQQ*ALEICI
Trigger: GATACAGATTTCCAAGGCCAACTGTTGGCCCCAACA...GTGATATATGCTATAAAGCAGTTTTCTATCACCTAAGTGGTTTTTCTTGCCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000480371.1
ENST00000558663.5
CDS-3UTR CAA 90 bp TTCTTACAGTTCTGGAAGCTGGGAAGTCTCAAGGTGCCAACAGTTTCATTTCCTCAGTTTGGTGATTCTTaGTACAGATTGATAACCATG +
Preference number: 5 (lower is better)
Translates to: FLQFWKLGSLKVPTVSFPQFGDS*YRLITM
Trigger: CATGGTTATCAATCTGTACAAAGAATCACCAAACTG...AGGAAATGAAACTGTTGGCACCTTGAGACTTCCCAGCTTCCAGAACTGTAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394132.7
CDS TCA 90 bp ATTCTCTCAATATGGGTACACACTCACGACTTGTTTCACCTTTACTaGTCTCAACATATTCCAAAGCTGCTTGATAGTGGGACAAAGCTT +
Preference number: 5 (lower is better)
Translates to: ILSIWVHTHDLFHLY*SQHIPKLLDSGTKL
Trigger: AAGCTTTGTCCCACTATCAAGCAGCTTTGGAATATGTTGAGATCAGTAAAGGTGAAACAAGTCGTGAGTGTGTACCCATATTGAGAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000494567.1
ENST00000558663.5
CDS GCA 90 bp AGGAAGATCTTTTACAACTCGGGTTTCAAAGGAACTTGTCCTTTATaGAAGTTATGGGAAGTCAGCAAAACATTCCAGAGAAGGTTACAC +
Preference number: 5 (lower is better)
Translates to: RKIFYNSGFKGTCPL*KLWEVSKTFQRRLH
Trigger: GTGTAACCTTCTCTGGAATGTTTTGCTGACTTCCCATAACTTGCATAAAGGACAAGTTCCTTTGAAACCCGAGTTGTAAAAGATCTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480371.1
CDS-3UTR CAA 90 bp GTATGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTGACCTACTCAGTCAGTaGATACTGTTCCTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: VCLRGLLCLLPKKYQVRSDLLSQ*ILFLLP
Trigger: TGGCAGAAGGAACAGTATCAACTGACTGAGTAGGTC...AGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CAA 90 bp TGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACCACTTCATCTAGGTGGTaGGATATGTGGGTTTCCTGT +
Preference number: 5 (lower is better)
Translates to: CLRGLLCLLPKKYQVRSTTSSRW*DMWVSC
Trigger: ACAGGAAACCCACATATCCAACCACCTAGATGAAGT...GGTAGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CAA 90 bp GAAATCTGTATCCTGACTGTTGAATTCCATTTTCTAGGCGGAGGTGATTTGTACCTGAAGCAGCTTGTTTaGGAACTTCTTTCTATGAGT +
Preference number: 5 (lower is better)
Translates to: EICILTVEFHFLGGGDLYLKQLV*ELLSMS
Trigger: ACTCATAGAAAGAAGTTCCAAAACAAGCTGCTTCAG...GTACAAATCACCTCCGCCTAGAAAATGGAATTCAACAGTCAGGATACAGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp AAAAAGGTAAGATTAGATCCATTCCTCATGCCATCCACACAAATAAACTCCAAACTCCATAGCAAATTCTaGTCAGTGCTACGCAACGCA +
Preference number: 5 (lower is better)
Translates to: KKVRLDPFLMPSTQINSKLHSKF*SVLRNA
Trigger: TGCGTTGCGTAGCACTGACAAGAATTTGCTATGGAG...TTTGGAGTTTATTTGTGTGGATGGCATGAGGAATGGATCTAATCTTACCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CAA 90 bp AGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGGGACAAAGCTTCTTTaGACTTCTTCTGACCTTGAT +
Preference number: 5 (lower is better)
Translates to: RKLLYSIYHPEGHPLSKCGTKLL*TSSDLD
Trigger: ATCAAGGTCAGAAGAAGTCAAAAGAAGCTTTGTCCC...ACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp AGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTATATTCCAAAGCTGCTaGATAGTGGGACAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: RKLLYSIYHPEGHPLSKCIFQSC*IVGQSF
Trigger: GAAGCTTTGTCCCACTATCAAGCAGCTTTGGAATAT...ACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp TCATGTTATTCTCAATCCCTATTAGCCTCCTATAAGAAAGGACTTCCTGAAGTTATGAGCCATGCTCTCTaGAAAATACTGCTCAGCTAC +
Preference number: 5 (lower is better)
Translates to: SCYSQSLLASYKKGLPEVMSHAL*KILLSY
Trigger: GTAGCTGAGCAGTATTTTCAAGAGAGCATGGCTCAT...AACTTCAGGAAGTCCTTTCTTATAGGAGGCTAATAGGGATTGAGAATAACATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262074.8
ENST00000394132.7
ENST00000459771.5
ENST00000558663.5
CDS-3UTR CAA 90 bp AAAAAGGTAAGATTAGATCCATTCCTCATGCCATCCACACAAATAAACTCCAAATTTGCAAACCAATCTTaGGGAGCCAGAGGTGGGAAT +
Preference number: 5 (lower is better)
Translates to: KKVRLDPFLMPSTQINSKFANQS*GARGGN
Trigger: ATTCCCACCTCTGGCTCCCAAAGATTGGTTTGCAAA...TTTGGAGTTTATTTGTGTGGATGGCATGAGGAATGGATCTAATCTTACCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS CCA 90 bp GTGATGCTAACAGCAGCAACAACTTCATCTAGGTGGTTGGATATGTaGGTTTCCTGTGATTCTTGCATATTTTTATATACATTGTCTTCG +
Preference number: 5 (lower is better)
Translates to: VMLTAATTSSRWLDM*VSCDSCIFLYTLSS
Trigger: CGAAGACAATGTATATAAAAATATGCAAGAATCACAGGAAACCCACATATCCAACCACCTAGATGAAGTTGTTGCTGCTGTTAGCATCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468436.1
ENST00000560860.5
CDS CCA 90 bp GTGATGCTAACAGCAGCAACAACTTCATCTAGGTGGTTGGATATGTaGGTTTCCTGTGATTCTTGCATATTTTTATATACATTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: VMLTAATTSSRWLDM*VSCDSCIFLYTLSS
Trigger: GGAAGACAATGTATATAAAAATATGCAAGAATCACAGGAAACCCACATATCCAACCACCTAGATGAAGTTGTTGCTGCTGTTAGCATCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561365.5
CDS-3UTR CAA 90 bp TGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACCGGGACAAAGCTTCTTTaGACTTCTTCTGACCTTGAT +
Preference number: 5 (lower is better)
Translates to: CLRGLLCLLPKKYQVRSTGTKLL*TSSDLD
Trigger: ATCAAGGTCAGAAGAAGTCAAAAGAAGCTTTGTCCC...GGTAGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CAA 90 bp CTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACCACAATATTCCAAAGCTGCTaGATAGTGGGACAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: LRGLLCLLPKKYQVRSTTIFQSC*IVGQSF
Trigger: GAAGCTTTGTCCCACTATCAAGCAGCTTTGGAATAT...TGTGGTAGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CAA 90 bp GTATGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTATGAGCCATGCTCTCTaGAAAATACTGCTCAGCTAC +
Preference number: 5 (lower is better)
Translates to: VCLRGLLCLLPKKYQVRSMSHAL*KILLSY
Trigger: GTAGCTGAGCAGTATTTTCAAGAGAGCATGGCTCAT...AGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CAA 90 bp AGAAGTTTTTCAGCCACAGTAGTGCTGATGGGTAAAAATTCTTGTTGGCAAGAATTCTCTGCTTTTCCTTaGACACTCAATCACTCCTTT +
Preference number: 5 (lower is better)
Translates to: RSFSATVVLMGKNSCWQEFSAFP*TLNHSF
Trigger: AAAGGAGTGATTGAGTGTCAAAGGAAAAGCAGAGAA...TTCTTGCCAACAAGAATTTTTACCCATCAGCACTACTGTGGCTGAAAAACTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394132.7
ENST00000394135.7
CDS-3UTR CAA 90 bp GTGATAGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAACTTAAAGTGGTATCGTaGCCTGTTGATATTGAAGTT +
Preference number: 5 (lower is better)
Translates to: VIENCFIAYITLKGIHCQLKVVS*PVDIEV
Trigger: AACTTCAATATCAACAGGCAACGATACCACTTTAAG...TTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCTATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394135.7
ENST00000558663.5
CDS-3UTR CAA 90 bp AGAAAACTGCTTTATAGCATATATCACCCTGAAGGGCATCCACTGTCAAAATGTGTGGAGAAGAGTATTTaGTCGAAGTTTGCAAACCAA +
Preference number: 5 (lower is better)
Translates to: RKLLYSIYHPEGHPLSKCVEKSI*SKFANQ
Trigger: TTGGTTTGCAAACTTCGACAAAATACTCTTCTCCAC...ACATTTTGACAGTGGATGCCCTTCAGGGTGATATATGCTATAAAGCAGTTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394135.7
ENST00000558663.5
CDS-3UTR CAA 90 bp AGAAGTTTTTCAGCCACAGTAGTGCTGATGGGTAAAAATTCTTGTTGGCAAGAAAGAACCAGCTTTCTCTaGAGATTCTTCTTCAGTTTC +
Preference number: 5 (lower is better)
Translates to: RSFSATVVLMGKNSCWQERTSFL*RFFFSF
Trigger: GAAACTGAAGAAGAATCTCAAGAGAAAGCTGGTTCT...TTCTTGCCAACAAGAATTTTTACCCATCAGCACTACTGTGGCTGAAAAACTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000480371.1
CDS CCA 90 bp GTGATGCTAACAGCAGCAACAACTTCATCTAGGTGGTTGGATATGTaGGTTTCCTGTGATTCTTGCATATTTTTATATACATTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: VMLTAATTSSRWLDM*VSCDSCIFLYTLSS
Trigger: AGAAGACAATGTATATAAAAATATGCAAGAATCACAGGAAACCCACATATCCAACCACCTAGATGAAGTTGTTGCTGCTGTTAGCATCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000394132.7
ENST00000394135.7
ENST00000560235.1
ENST00000560279.5
ENST00000560772.5
CDS CCA 90 bp GTGATGCTAACAGCAGCAACAACTTCATCTAGGTGGTTGGATATGTaGGTTTCCTGTGATTCTTGCATATTTTTATATACATTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: VMLTAATTSSRWLDM*VSCDSCIFLYTLSS
Trigger: TGAAGACAATGTATATAAAAATATGCAAGAATCACAGGAAACCCACATATCCAACCACCTAGATGAAGTTGTTGCTGCTGTTAGCATCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558663.5
CDS-3UTR CAA 90 bp AAAAAGGTAAGATTAGATCCATTCCTCATGCCATCCACACAAATAAACTCCAAATGTTGGAATAGGACTTaGCTTTCTCTTCACAGAGGT +
Preference number: 5 (lower is better)
Translates to: KKVRLDPFLMPSTQINSKCWNRT*LSLHRG
Trigger: ACCTCTGTGAAGAGAAAGCAAAGTCCTATTCCAACA...TTTGGAGTTTATTTGTGTGGATGGCATGAGGAATGGATCTAATCTTACCTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CAA 90 bp GTATGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTTTTCTGCATGTTGTTTaGCTTGCAGTGACAGTCCTT +
Preference number: 5 (lower is better)
Translates to: VCLRGLLCLLPKKYQVRSFLHVV*LAVTVL
Trigger: AAGGACTGTCACTGCAAGCAAAACAACATGCAGAAA...AGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CAA 90 bp TGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACCAAAGTCTCTCTGCTTTaGTCAAATTCTCTGCAGCTT +
Preference number: 5 (lower is better)
Translates to: CLRGLLCLLPKKYQVRSTKVSLL*SNSLQL
Trigger: AAGCTGCAGAGAATTTGACAAAAGCAGAGAGACTTT...GGTAGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CAA 90 bp CTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACCACACGTTGCCTGTTGATATaGAAGTTTGTCAAAGAACGT +
Preference number: 5 (lower is better)
Translates to: LRGLLCLLPKKYQVRSTTRCLLI*KFVKER
Trigger: ACGTTCTTTGACAAACTTCAATATCAACAGGCAACG...TGTGGTAGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CAA 90 bp CTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACCACAGTATTTTGTCGAAGTTaGCAAACCAATCTTTGGGAG +
Preference number: 5 (lower is better)
Translates to: LRGLLCLLPKKYQVRSTTVFCRS*QTNLWE
Trigger: CTCCCAAAGATTGGTTTGCAAACTTCGACAAAATAC...TGTGGTAGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CAA 90 bp GGCAAGAAAAACCACTTAGGTGATAGAAAACTGCTTTATAGCATATATCACCCTGTGGAGAAGAGTATTTaGTCGAAGTTTGCAAACCAA +
Preference number: 5 (lower is better)
Translates to: GKKNHLGDRKLLYSIYHPVEKSI*SKFANQ
Trigger: TTGGTTTGCAAACTTCGACAAAATACTCTTCTCCAC...AGGGTGATATATGCTATAAAGCAGTTTTCTATCACCTAAGTGGTTTTTCTTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394135.7
ENST00000558663.5
CDS CCA 90 bp GTGATGCTAACAGCAGCAACAACTTCATCTAGGTGGTTGGATATGTaGGTTTCCTGTGATTCTTGCATATTTTTATATACATTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: VMLTAATTSSRWLDM*VSCDSCIFLYTLSF
Trigger: AAAAGACAATGTATATAAAAATATGCAAGAATCACAGGAAACCCACATATCCAACCACCTAGATGAAGTTGTTGCTGCTGTTAGCATCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000459771.5
ENST00000558078.5
CDS-3UTR CAA 90 bp GTATGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTCTGAAGCAGCTTGTTTaGGAACTTCTTTCTATGAGT +
Preference number: 5 (lower is better)
Translates to: VCLRGLLCLLPKKYQVRSLKQLV*ELLSMS
Trigger: ACTCATAGAAAGAAGTTCCAAAACAAGCTGCTTCAG...AGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACATAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CAA 90 bp TGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACCTGGTATCGTTGCCTGTaGATATTGAAGTTTGTCAAA +
Preference number: 5 (lower is better)
Translates to: CLRGLLCLLPKKYQVRSTWYRCL*ILKFVK
Trigger: TTTGACAAACTTCAATATCAACAGGCAACGATACCA...GGTAGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CAA 90 bp CTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTACCACACTTAAAGTGGTATCGTaGCCTGTTGATATTGAAGTT +
Preference number: 5 (lower is better)
Translates to: LRGLLCLLPKKYQVRSTTLKVVS*PVDIEV
Trigger: AACTTCAATATCAACAGGCAACGATACCACTTTAAG...TGTGGTAGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS-3UTR CAA 90 bp GGCAAGAAAAACCACTTAGGTGATAGAAAACTGCTTTATAGCATATATCACCCTCTTAAAGTGGTATCGTaGCCTGTTGATATTGAAGTT +
Preference number: 5 (lower is better)
Translates to: GKKNHLGDRKLLYSIYHPLKVVS*PVDIEV
Trigger: AACTTCAATATCAACAGGCAACGATACCACTTTAAG...AGGGTGATATATGCTATAAAGCAGTTTTCTATCACCTAAGTGGTTTTTCTTGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394135.7
ENST00000558663.5
CDS-3UTR CAA 90 bp GTATGTCTAAGAGGCTTACTATGTCTTTTACCCAAAAAGTATCAGGTTAGATCTGTGGAGAAGAGTATTTaGTCGAAGTTTGCAAACCAA +
Preference number: 5 (lower is better)
Translates to: VCLRGLLCLLPKKYQVRSVEKSI*SKFANQ
Trigger: TTGGTTTGCAAACTTCGACAAAATACTCTTCTCCAC...AGATCTAACCTGATACTTTTTGGGTAAAAGACATAGTAAGCCTCTTAGACATAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS GCA 72 bp CTTGCGGGCCCCACTGTGGTTCCCCTGCGCCAGGTCTaGTCCTCCCAGGAGCCGGTATGTCTCTGCCACCTC +
Preference number: 6 (lower is better)
Translates to: LAGPTVVPLRQV*SSQEPVCLCHL
Trigger: GAGGTGGCAGAGACATACCGGCTCCTGGGAGGAGCAGACCTGGCGCAGGGGAACCACAGTGGGGCCCGCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000394135.7
ENST00000434594.5
ENST00000459771.5
ENST00000480371.1
ENST00000494567.1
ENST00000558438.1
ENST00000558663.5
CDS CCA 72 bp AGGTCTCCCTTCTTCAGTTTCTTGCGGGCCCCACTGTaGTTCCCCTGCGCCAGGTCTGCTCCTCCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: RSPFFSFLRAPL*FPCARSAPPRS
Trigger: GCTCCTGGGAGGAGCAGACCTGGCGCAGGGGAACCACAGTGGGGCCCGCAAGAAACTGAAGAAGGGAGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262074.8
ENST00000459771.5
CDS CCA 72 bp TGGAGACACTTCTTCAGTTTCTTGCGGGCCCCACTGTaGTTCCCCTGCGCCAGGTCTGCTCCTCCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: WRHFFSFLRAPL*FPCARSAPPRS
Trigger: GCTCCTGGGAGGAGCAGACCTGGCGCAGGGGAACCACAGTGGGGCCCGCAAGAAACTGAAGAAGTGTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394132.7
ENST00000394135.7
ENST00000494567.1
ENST00000558663.5
CDS TCA 72 bp CTTTCTGCAGCCTTTCACCACTCTCCTGGCCTTGGCTaGCTGAGCCAGGGGTGGGCCCTGGATTCAAGCCAG +
Preference number: 6 (lower is better)
Translates to: LSAAFHHSPGLG*LSQGWALDSSQ
Trigger: CTGGCTTGAATCCAGGGCCCACCCCTGGCTCAGTCAGCCAAGGCCAGGAGAGTGGTGAAAGGCTGCAGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558438.1
CDS CCA 72 bp AGCTTTACCTTCTTCAGTTTCTTGCGGGCCCCACTGTaGTTCCCCTGCGCCAGGTCTGCTCCTCCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: SFTFFSFLRAPL*FPCARSAPPRS
Trigger: GCTCCTGGGAGGAGCAGACCTGGCGCAGGGGAACCACAGTGGGGCCCGCAAGAAACTGAAGAAGGTAAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS CCA 72 bp GTTATAGCCTTCTTCAGTTTCTTGCGGGCCCCACTGTaGTTCCCCTGCGCCAGGTCTGCTCCTCCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: VIAFFSFLRAPL*FPCARSAPPRS
Trigger: GCTCCTGGGAGGAGCAGACCTGGCGCAGGGGAACCACAGTGGGGCCCGCAAGAAACTGAAGAAGGCTATAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434594.5
CDS CCA 72 bp CTTTCAAGCTTCTTCAGTTTCTTGCGGGCCCCACTGTaGTTCCCCTGCGCCAGGTCTGCTCCTCCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: LSSFFSFLRAPL*FPCARSAPPRS
Trigger: GCTCCTGGGAGGAGCAGACCTGGCGCAGGGGAACCACAGTGGGGCCCGCAAGAAACTGAAGAAGCTTGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558438.1
CDS GCA 72 bp AGCGACAGCAGCATGGGCGACGATGTGTGCCGAGTCTaGTGCCTCCACTTGAGAGGGGCTTCTACTCAGGAT +
Preference number: 6 (lower is better)
Translates to: SDSSMGDDVCRV*CLHLRGASTQD
Trigger: ATCCTGAGTAGAAGCCCCTCTCAAGTGGAGGCAGCAGACTCGGCACACATCGTCGCCCATGCTGCTGTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000494567.1
ENST00000558663.5
CDS CCA 72 bp TTGAGATTCTTCTTCAGTTTCTTGCGGGCCCCACTGTaGTTCCCCTGCGCCAGGTCTGCTCCTCCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: LRFFFSFLRAPL*FPCARSAPPRS
Trigger: GCTCCTGGGAGGAGCAGACCTGGCGCAGGGGAACCACAGTGGGGCCCGCAAGAAACTGAAGAAGAATCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480371.1
CDS CAA 90 bp GCCGTGGACAGCATGCCCATGGCCTGCTGGGTGGCCAGAGTCCTTTaGTCCTGCGGTCCATATAAGAGGGTCTGGATCTGGAGACACTTC +
Preference number: 6 (lower is better)
Translates to: AVDSMPMACWVARVL*SCGPYKRVWIWRHF
Trigger: GAAGTGTCTCCAGATCCAGACCCTCTTATATGGACCGCAGGACAAAAGGACTCTGGCCACCCAGCAGGCCATGGGCATGCTGTCCACGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394132.7
ENST00000394135.7
ENST00000494567.1
ENST00000558663.5
CDS TCA 72 bp CTCCCAGGAGCCGGTATGTCTCTGCCACCTCGGGACTaGAATCGCCAAATGCTTCCACTTTGGCTTCCAGGG +
Preference number: 6 (lower is better)
Translates to: LPGAGMSLPPRD*NRQMLPLWLPG
Trigger: CCCTGGAAGCCAAAGTGGAAGCATTTGGCGATTTCAGTCCCGAGGTGGCAGAGACATACCGGCTCCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000394135.7
ENST00000434594.5
ENST00000459771.5
ENST00000480371.1
ENST00000494567.1
ENST00000558438.1
ENST00000558663.5
CDS GCA 72 bp GACAGCAGCATGGGCGACGATGTGTGCCGAGTCTGCTaGCTCCACTTGAGAGGGGCTTCTACTCAGGATGAT +
Preference number: 6 (lower is better)
Translates to: DSSMGDDVCRVC*LHLRGASTQDD
Trigger: ATCATCCTGAGTAGAAGCCCCTCTCAAGTGGAGGCAGCAGACTCGGCACACATCGTCGCCCATGCTGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000494567.1
ENST00000558663.5
CDS CAA 90 bp GACAGCAGCATGGGCGACGATGTGTGCCGAGTCTGCTGCCTCCACTaGAGAGGGGCTTCTACTCAGGATGATAAGATGTGCCTGGAGGAA +
Preference number: 6 (lower is better)
Translates to: DSSMGDDVCRVCCLH*RGASTQDDKMCLEE
Trigger: TTCCTCCAGGCACATCTTATCATCCTGAGTAGAAGCCCCTCTCAAGTGGAGGCAGCAGACTCGGCACACATCGTCGCCCATGCTGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000494567.1
ENST00000558663.5
CDS CAA 90 bp GGGCCCTGGATTCAAGCCAGGCCCGTCAGTCTTTCCCTGAGGTCTTaGAGGTCTTTCAAGCTTCTTCAGTTTCTTGCGGGCCCCACTGTG +
Preference number: 6 (lower is better)
Translates to: GPWIQARPVSLSLRS*RSFKLLQFLAGPTV
Trigger: CACAGTGGGGCCCGCAAGAAACTGAAGAAGCTTGAAAGACCTCAAAGACCTCAGGGAAAGACTGACGGGCCTGGCTTGAATCCAGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558438.1
CDS TCA 72 bp TGGGCGACGATGTGTGCCGAGTCTGCTGCCTCCACTTaGGAGGGGCTTCTACTCAGGATGATAAGATGTGCC +
Preference number: 6 (lower is better)
Translates to: WATMCAESAAST*EGLLLRMIRCA
Trigger: GGCACATCTTATCATCCTGAGTAGAAGCCCCTCTCAAGTGGAGGCAGCAGACTCGGCACACATCGTCGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000494567.1
ENST00000558663.5
CDS TCA 72 bp ATACTGCTCAGCTACATCATGGTGCTCGTGTCTCCCTaGAGCGACAGCAGCATGGGCGACGATGTGTGCCGA +
Preference number: 6 (lower is better)
Translates to: ILLSYIMVLVSP*SDSSMGDDVCR
Trigger: TCGGCACACATCGTCGCCCATGCTGCTGTCGCTTCAGGGAGACACGAGCACCATGATGTAGCTGAGCAGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000394135.7
ENST00000434594.5
ENST00000459771.5
ENST00000494567.1
ENST00000558663.5
CDS CAA 72 bp ATGGGCGACGATGTGTGCCGAGTCTGCTGCCTCCACTaGAGAGGGGCTTCTACTCAGGATGATAAGATGTGC +
Preference number: 6 (lower is better)
Translates to: MGDDVCRVCCLH*RGASTQDDKMC
Trigger: GCACATCTTATCATCCTGAGTAGAAGCCCCTCTCAAGTGGAGGCAGCAGACTCGGCACACATCGTCGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000494567.1
ENST00000558663.5
CDS CAA 72 bp GCCACCTCGGGACTGAAATCGCCAAATGCTTCCACTTaGGCTTCCAGGGACTCTCTCAGGATCGAGGTTGCT +
Preference number: 6 (lower is better)
Translates to: ATSGLKSPNAST*ASRDSLRIEVA
Trigger: AGCAACCTCGATCCTGAGAGAGTCCCTGGAAGCCAAAGTGGAAGCATTTGGCGATTTCAGTCCCGAGGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000394135.7
ENST00000434594.5
ENST00000459771.5
ENST00000480371.1
ENST00000494567.1
ENST00000558663.5
CDS CAA 72 bp GTTAGTACTGGTTCCAGCTTTACCTTCTTCAGTTTCTaGCGGGCCCCACTGTGGTTCCCCTGCGCCAGGTCT +
Preference number: 6 (lower is better)
Translates to: VSTGSSFTFFSF*RAPLWFPCARS
Trigger: AGACCTGGCGCAGGGGAACCACAGTGGGGCCCGCAAGAAACTGAAGAAGGTAAAGCTGGAACCAGTACTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS GCA 72 bp GTATGTCTCTGCCACCTCGGGACTGAAATCGCCAAATaGTTCCACTTTGGCTTCCAGGGACTCTCTCAGGAT +
Preference number: 6 (lower is better)
Translates to: VCLCHLGTEIAK*FHFGFQGLSQD
Trigger: ATCCTGAGAGAGTCCCTGGAAGCCAAAGTGGAAGCATTTGGCGATTTCAGTCCCGAGGTGGCAGAGACATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000394135.7
ENST00000434594.5
ENST00000459771.5
ENST00000480371.1
ENST00000494567.1
ENST00000558663.5
CDS GCA 72 bp TTCCTGATCCATGAAGCCGCCTTCAGGAATTCTTTCTaGAGCCTTTCACCACTCTCCTGGCCTTGGCTGACT +
Preference number: 6 (lower is better)
Translates to: FLIHEAAFRNSF*SLSPLSWPWLT
Trigger: AGTCAGCCAAGGCCAGGAGAGTGGTGAAAGGCTGCAGAAAGAATTCCTGAAGGCGGCTTCATGGATCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558438.1
CDS CCA 72 bp AGCATGCTCCTGGGATGTCTCCTAGTGACTGACCTTTaGTTTGGATGTTCTGAGGGATCAGAGGATGGGCTC +
Preference number: 6 (lower is better)
Translates to: SMLLGCLLVTDL*FGCSEGSEDGL
Trigger: GAGCCCATCCTCTGATCCCTCAGAACATCCAAACCAAAGGTCAGTCACTAGGAGACATCCCAGGAGCATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434594.5
CDS CAA 72 bp GGGTGCCTCCGTTTCTTTTTCGAGCGAATTACACAGTaGTCTTGGCAGCGTGATTTGCCCTCTGGTTCCTGC +
Preference number: 6 (lower is better)
Translates to: GCLRFFFERITQ*SWQRDLPSGSC
Trigger: GCAGGAACCAGAGGGCAAATCACGCTGCCAAGACAACTGTGTAATTCGCTCGAAAAAGAAACGGAGGCACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490671.1
CDS CAA 90 bp TATGTCTCTGCCACCTCGGGACTGAAATCGCCAAATGCTTCCACTTaGGCTTCCAGGGACTCTCTCAGGATCGAGGTTGCTCTCTCTTTT +
Preference number: 6 (lower is better)
Translates to: YVSATSGLKSPNAST*ASRDSLRIEVALSF
Trigger: AAAAGAGAGAGCAACCTCGATCCTGAGAGAGTCCCTGGAAGCCAAAGTGGAAGCATTTGGCGATTTCAGTCCCGAGGTGGCAGAGACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000394135.7
ENST00000434594.5
ENST00000459771.5
ENST00000480371.1
ENST00000494567.1
ENST00000558663.5
CDS CCA 72 bp AGAGTCCTTTTGTCCTGCGGTCCATATAAGAGGGTCTaGATCTGGAGACACTTCTTCAGTTTCTTGCGGGCC +
Preference number: 6 (lower is better)
Translates to: RVLLSCGPYKRV*IWRHFFSFLRA
Trigger: GGCCCGCAAGAAACTGAAGAAGTGTCTCCAGATCCAGACCCTCTTATATGGACCGCAGGACAAAAGGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394132.7
ENST00000394135.7
ENST00000494567.1
ENST00000558663.5
CDS CAA 72 bp GAGGCTCACCGTTTCTTTTTCGAGCGAATTACACAGTaGTCTTGGCAGCGTGATTTGCCCTCTGGTTCCTGC +
Preference number: 6 (lower is better)
Translates to: EAHRFFFERITQ*SWQRDLPSGSC
Trigger: GCAGGAACCAGAGGGCAAATCACGCTGCCAAGACAACTGTGTAATTCGCTCGAAAAAGAAACGGTGAGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394132.7
ENST00000394135.7
CDS CAA 72 bp ATTCAAGCCAGGCCCGTCAGTCTTTCCCTGAGGTCTTaGAGGTCTTTCAAGCTTCTTCAGTTTCTTGCGGGC +
Preference number: 6 (lower is better)
Translates to: IQARPVSLSLRS*RSFKLLQFLAG
Trigger: GCCCGCAAGAAACTGAAGAAGCTTGAAAGACCTCAAAGACCTCAGGGAAAGACTGACGGGCCTGGCTTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558438.1
CDS CAA 72 bp CTGCCAGACCGTTTCTTTTTCGAGCGAATTACACAGTaGTCTTGGCAGCGTGATTTGCCCTCTGGTTCCTGC +
Preference number: 6 (lower is better)
Translates to: LPDRFFFERITQ*SWQRDLPSGSC
Trigger: GCAGGAACCAGAGGGCAAATCACGCTGCCAAGACAACTGTGTAATTCGCTCGAAAAAGAAACGGTCTGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558078.5
ENST00000560235.1
CDS CAA 90 bp GCTCATGGACGGCCTGTTTGTACTCATGACTGTTGGAATAGGACTTaGCTTTCTCTTCACAGAGGTGGAGTTTCTCTCGAGGAGGCTGGA +
Preference number: 6 (lower is better)
Translates to: AHGRPVCTHDCWNRT*LSLHRGGVSLEEAG
Trigger: TCCAGCCTCCTCGAGAGAAACTCCACCTCTGTGAAGAGAAAGCAAAGTCCTATTCCAACAGTCATGAGTACAAACAGGCCGTCCATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
ENST00000560279.5
ENST00000560772.5
ENST00000560860.5
ENST00000561365.5
CDS TCA 72 bp CTTCTTGCCAGCCGTGGGTTCAGCTTTCTAGGTCTCTaGATCACAACTGCCAATGAGACCTACTCAGTCAGT +
Preference number: 6 (lower is better)
Translates to: LLASRGFSFLGL*ITTANETYSVS
Trigger: ACTGACTGAGTAGGTCTCATTGGCAGTTGTGATTCAGAGACCTAGAAAGCTGAACCCACGGCTGGCAAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000459771.5
ENST00000490671.1
ENST00000558078.5
ENST00000560235.1
CDS CCA 72 bp TGCCAGTATTTACACAGCATGGGGCCCCTTAGCTTCTaGTCTCTGCTCTGGTCTAGCCATCTTAAATTCCAC +
Preference number: 6 (lower is better)
Translates to: CQYLHSMGPLSF*SLLWSSHLKFH
Trigger: GTGGAATTTAAGATGGCTAGACCAGAGCAGAGACCAGAAGCTAAGGGGCCCCATGCTGTGTAAATACTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490671.1
CDS CAA 90 bp CATGTGCCTCTGCTAGTTTCCAATGTGAGTCTCCATAGCAAATTCTaGTCAGTGCTACGCAACGCACAAGCTCATGGACGGCCTGTTTGT +
Preference number: 6 (lower is better)
Translates to: HVPLLVSNVSLHSKF*SVLRNAQAHGRPVC
Trigger: ACAAACAGGCCGTCCATGAGCTTGTGCGTTGCGTAGCACTGACAAGAATTTGCTATGGAGACTCACATTGGAAACTAGCAGAGGCACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000494567.1
ENST00000558663.5
ENST00000560279.5
ENST00000560860.5
ENST00000561365.5
CDS CAA 90 bp TCTGCTGGAGAGGCTCACCGTTTCTTTTTCGAGCGAATTACACAGTaGTCTTGGCAGCGTGATTTGCCCTCTGGTTCCTGCTTTATCAGT +
Preference number: 6 (lower is better)
Translates to: SAGEAHRFFFERITQ*SWQRDLPSGSCFIS
Trigger: ACTGATAAAGCAGGAACCAGAGGGCAAATCACGCTGCCAAGACAACTGTGTAATTCGCTCGAAAAAGAAACGGTGAGCCTCTCCAGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394132.7
ENST00000394135.7
CDS TCA 72 bp GTTTCATTTAAAAGAACCACCACAAGGGAGAGAAATTaGCCTTGGAGAGGGGAGGGAGAGCCTAGTCTCGTG +
Preference number: 6 (lower is better)
Translates to: VSFKRTTTRERN*PWRGEGEPSLV
Trigger: CACGAGACTAGGCTCTCCCTCCCCTCTCCAAGGTCAATTTCTCTCCCTTGTGGTGGTTCTTTTAAATGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS CAA 72 bp CTGCTAGTTTCCAATGTGAGTCTCCATAGCAAATTCTaGTCAGTGCTACGCAACGCACAAGCTCATGGACGG +
Preference number: 6 (lower is better)
Translates to: LLVSNVSLHSKF*SVLRNAQAHGR
Trigger: CCGTCCATGAGCTTGTGCGTTGCGTAGCACTGACAAGAATTTGCTATGGAGACTCACATTGGAAACTAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000494567.1
ENST00000558663.5
ENST00000560279.5
ENST00000560860.5
ENST00000561365.5
CDS CAA 72 bp GGAAGTGTCGCTGAGAGCAGGAAACTAAGGTCTCCCTaGAATGAGAGAAAGATGACCTCATTCTTAGGCCCT +
Preference number: 6 (lower is better)
Translates to: GSVAESRKLRSP*NERKMTSFLGP
Trigger: AGGGCCTAAGAATGAGGTCATCTTTCTCTCATTCAAGGGAGACCTTAGTTTCCTGCTCTCAGCGACACTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434594.5
ENST00000490688.2
CDS CAA 72 bp AGACTCCATCGTTTCTTTTTCGAGCGAATTACACAGTaGTCTTGGCAGCGTGATTTGCCCTCTGGTTCCTGC +
Preference number: 6 (lower is better)
Translates to: RLHRFFFERITQ*SWQRDLPSGSC
Trigger: GCAGGAACCAGAGGGCAAATCACGCTGCCAAGACAACTGTGTAATTCGCTCGAAAAAGAAACGATGGAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000459771.5
ENST00000560772.5
CDS CAA 90 bp GACAGAGCGAGACTCCATCGTTTCTTTTTCGAGCGAATTACACAGTaGTCTTGGCAGCGTGATTTGCCCTCTGGTTCCTGCTTTATCAGT +
Preference number: 6 (lower is better)
Translates to: DRARLHRFFFERITQ*SWQRDLPSGSCFIS
Trigger: ACTGATAAAGCAGGAACCAGAGGGCAAATCACGCTGCCAAGACAACTGTGTAATTCGCTCGAAAAAGAAACGATGGAGTCTCGCTCTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000459771.5
ENST00000560772.5
CDS CAA 90 bp CTGTTCCTTCTGCCAGACCGTTTCTTTTTCGAGCGAATTACACAGTaGTCTTGGCAGCGTGATTTGCCCTCTGGTTCCTGCTTTATCAGT +
Preference number: 6 (lower is better)
Translates to: LFLLPDRFFFERITQ*SWQRDLPSGSCFIS
Trigger: ACTGATAAAGCAGGAACCAGAGGGCAAATCACGCTGCCAAGACAACTGTGTAATTCGCTCGAAAAAGAAACGGTCTGGCAGAAGGAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558078.5
ENST00000560235.1
CDS CAA 90 bp TTTCATAAGGGGTGCCTCCGTTTCTTTTTCGAGCGAATTACACAGTaGTCTTGGCAGCGTGATTTGCCCTCTGGTTCCTGCTTTATCAGT +
Preference number: 6 (lower is better)
Translates to: FHKGCLRFFFERITQ*SWQRDLPSGSCFIS
Trigger: ACTGATAAAGCAGGAACCAGAGGGCAAATCACGCTGCCAAGACAACTGTGTAATTCGCTCGAAAAAGAAACGGAGGCACCCCTTATGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490671.1
CDS GCA 72 bp AAGTGGTTGATGGATACATCGTGGAGTCCCAGGGCTTaGTCTACACCTGCTAATTCTCTCAATATGGGTACA +
Preference number: 6 (lower is better)
Translates to: KWLMDTSWSPRA*STPANSLNMGT
Trigger: TGTACCCATATTGAGAGAATTAGCAGGTGTAGAGCAAGCCCTGGGACTCCACGATGTATCCATCAACCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000494567.1
ENST00000558663.5
CDS CAA 72 bp CGGCCTGTTTGTACTCATGACTGTTGGAATAGGACTTaGCTTTCTCTTCACAGAGGTGGAGTTTCTCTCGAG +
Preference number: 6 (lower is better)
Translates to: RPVCTHDCWNRT*LSLHRGGVSLE
Trigger: CTCGAGAGAAACTCCACCTCTGTGAAGAGAAAGCAAAGTCCTATTCCAACAGTCATGAGTACAAACAGGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000558663.5
ENST00000560279.5
ENST00000560772.5
ENST00000560860.5
ENST00000561365.5
CDS CAA 72 bp CATTGTCTTCGTTTCTTTTTCGAGCGAATTACACAGTaGTCTTGGCAGCGTGATTTGCCCTCTGGTTCCTGC +
Preference number: 6 (lower is better)
Translates to: HCLRFFFERITQ*SWQRDLPSGSC
Trigger: GCAGGAACCAGAGGGCAAATCACGCTGCCAAGACAACTGTGTAATTCGCTCGAAAAAGAAACGAAGACAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560860.5
CDS CAA 90 bp ACAGAAACAAAAGTCTCCTTACCTCATGACTGTTGGAATAGGACTTaGCTTTCTCTTCACAGAGGTGGAGTTTCTCTCGAGGAGGCTGGA +
Preference number: 6 (lower is better)
Translates to: TETKVSLPHDCWNRT*LSLHRGGVSLEEAG
Trigger: TCCAGCCTCCTCGAGAGAAACTCCACCTCTGTGAAGAGAAAGCAAAGTCCTATTCCAACAGTCATGAGGTAAGGAGACTTTTGTTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468436.1
CDS TCA 72 bp CTTTTTCGAGCGAATTACACAGTTGTCTTGGCAGCGTaGTTTGCCCTCTGGTTCCTGCTTTATCAGTTTGGT +
Preference number: 6 (lower is better)
Translates to: LFRANYTVVLAA*FALWFLLYQFG
Trigger: ACCAAACTGATAAAGCAGGAACCAGAGGGCAAATCACGCTGCCAAGACAACTGTGTAATTCGCTCGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000490671.1
ENST00000558078.5
ENST00000560235.1
ENST00000560772.5
ENST00000560860.5
CDS CCA 72 bp GGTTCTAGATTCTACACCCCATGTCCTGAACTTCCTTaGCTCCCATACTTCCAATCACACTTCCTAAGTCAT +
Preference number: 6 (lower is better)
Translates to: GSRFYTPCPELP*LPYFQSHFLSH
Trigger: ATGACTTAGGAAGTGTGATTGGAAGTATGGGAGCCAAGGAAGTTCAGGACATGGGGTGTAGAATCTAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494567.1
CDS CAA 72 bp CATCCCTTCAGAATCCTTAAGATGAGCCATGCTCTCTaGAAAATACTGCTCAGCTACATCATGGTGCTCGTG +
Preference number: 6 (lower is better)
Translates to: HPFRILKMSHAL*KILLSYIMVLV
Trigger: CACGAGCACCATGATGTAGCTGAGCAGTATTTTCAAGAGAGCATGGCTCATCTTAAGGATTCTGAAGGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000394135.7
ENST00000434594.5
ENST00000459771.5
ENST00000494567.1
ENST00000558663.5
CDS CAA 72 bp TTCGAGCGAATTACACAGTTGTCTTGGCAGCGTGATTaGCCCTCTGGTTCCTGCTTTATCAGTTTGGTGATT +
Preference number: 6 (lower is better)
Translates to: FERITQLSWQRD*PSGSCFISLVI
Trigger: AATCACCAAACTGATAAAGCAGGAACCAGAGGGCAAATCACGCTGCCAAGACAACTGTGTAATTCGCTCGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000490671.1
ENST00000558078.5
ENST00000560235.1
ENST00000560772.5
ENST00000560860.5
CDS CAA 90 bp GCCCTCTGGTTCCTGCTTTATCAGTTTGGTGATTCTTTGTACAGATaGATAACCATGAAAAAGTCTAAAGTAGGGCAGTTCCGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: ALWFLLYQFGDSLYR*ITMKKSKVGQFRSS
Trigger: GCTGCTCCGGAACTGCCCTACTTTAGACTTTTTCATGGTTATCAATCTGTACAAAGAATCACCAAACTGATAAAGCAGGAACCAGAGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000394132.7
ENST00000394135.7
ENST00000490671.1
ENST00000558078.5
ENST00000560772.5
ENST00000560860.5
CDS CCA 72 bp CATCTGTATTCTCACTATAGGGAGGCACAATGGAGTTaGCGAGGATTTGTCTGGCTTTTTCTGCATGTTGTT +
Preference number: 6 (lower is better)
Translates to: HLYSHYREAQWS*RGFVWLFLHVV
Trigger: AACAACATGCAGAAAAAGCCAGACAAATCCTCGCCAACTCCATTGTGCCTCCCTATAGTGAGAATACAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000494567.1
ENST00000558663.5
ENST00000560279.5
ENST00000561365.5
CDS CAA 72 bp ACCAATAGCGAGTGGAGAAGAGTATTTTGTCGAAGTTaGCAAACCAATCTTTGGGAGCCAGAGGTGGGAATT +
Preference number: 6 (lower is better)
Translates to: TNSEWRRVFCRS*QTNLWEPEVGI
Trigger: AATTCCCACCTCTGGCTCCCAAAGATTGGTTTGCAAACTTCGACAAAATACTCTTCTCCACTCGCTATTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394135.7
CDS CAA 90 bp CGTTTCTTTTTCGAGCGAATTACACAGTTGTCTTGGCAGCGTGATTaGCCCTCTGGTTCCTGCTTTATCAGTTTGGTGATTCTTTGTACA +
Preference number: 6 (lower is better)
Translates to: RFFFERITQLSWQRD*PSGSCFISLVILCT
Trigger: TGTACAAAGAATCACCAAACTGATAAAGCAGGAACCAGAGGGCAAATCACGCTGCCAAGACAACTGTGTAATTCGCTCGAAAAAGAAACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000490671.1
ENST00000558078.5
ENST00000560235.1
ENST00000560772.5
ENST00000560860.5
CDS CAA 72 bp ATCAATAGCGAGTGGAGAAGAGTATTTTGTCGAAGTTaGCAAACCAATCTTTGGGAGCCAGAGGTGGGAATT +
Preference number: 6 (lower is better)
Translates to: INSEWRRVFCRS*QTNLWEPEVGI
Trigger: AATTCCCACCTCTGGCTCCCAAAGATTGGTTTGCAAACTTCGACAAAATACTCTTCTCCACTCGCTATTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394129.6
CDS CAA 72 bp TTCAATAGCGAGTGGAGAAGAGTATTTTGTCGAAGTTaGCAAACCAATCTTTGGGAGCCAGAGGTGGGAATT +
Preference number: 6 (lower is better)
Translates to: FNSEWRRVFCRS*QTNLWEPEVGI
Trigger: AATTCCCACCTCTGGCTCCCAAAGATTGGTTTGCAAACTTCGACAAAATACTCTTCTCCACTCGCTATTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558663.5
CDS TCA 72 bp ATATGGGTACACACTCACGACTTGTTTCACCTTTACTaGTCTCAACATATTCCAAAGCTGCTTGATAGTGGG +
Preference number: 6 (lower is better)
Translates to: IWVHTHDLFHLY*SQHIPKLLDSG
Trigger: CCCACTATCAAGCAGCTTTGGAATATGTTGAGATCAGTAAAGGTGAAACAAGTCGTGAGTGTGTACCCATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000494567.1
ENST00000558663.5
CDS CAA 90 bp TTTTATATACATTGTCTTCGTTTCTTTTTCGAGCGAATTACACAGTaGTCTTGGCAGCGTGATTTGCCCTCTGGTTCCTGCTTTATCAGT +
Preference number: 6 (lower is better)
Translates to: FYIHCLRFFFERITQ*SWQRDLPSGSCFIS
Trigger: ACTGATAAAGCAGGAACCAGAGGGCAAATCACGCTGCCAAGACAACTGTGTAATTCGCTCGAAAAAGAAACGAAGACAATGTATATAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560860.5
CDS TCA 72 bp GTGATTTGCCCTCTGGTTCCTGCTTTATCAGTTTGGTaGTTCTTTGTACAGATTGATAACCATGAAAAAGTC +
Preference number: 6 (lower is better)
Translates to: VICPLVPALSVW*FFVQIDNHEKV
Trigger: GACTTTTTCATGGTTATCAATCTGTACAAAGAATCACCAAACTGATAAAGCAGGAACCAGAGGGCAAATCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000394132.7
ENST00000394135.7
ENST00000490671.1
ENST00000558078.5
ENST00000560235.1
ENST00000560772.5
ENST00000560860.5
CDS GCA 72 bp TTTTACAACTCGGGTTTCAAAGGAACTTGTCCTTTATaGAAGTTATGGGAAGTCAGCAAAACATTCCAGAGA +
Preference number: 6 (lower is better)
Translates to: FYNSGFKGTCPL*KLWEVSKTFQR
Trigger: TCTCTGGAATGTTTTGCTGACTTCCCATAACTTGCATAAAGGACAAGTTCCTTTGAAACCCGAGTTGTAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480371.1
CDS CAA 72 bp AAGGAAGATCTTTTACAACTCGGGTTTCAAAGGAACTaGTCCTTTATGCAAGTTATGGGAAGTCAGCAAAAC +
Preference number: 6 (lower is better)
Translates to: KEDLLQLGFQRN*SFMQVMGSQQN
Trigger: GTTTTGCTGACTTCCCATAACTTGCATAAAGGACAAGTTCCTTTGAAACCCGAGTTGTAAAAGATCTTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480371.1
CDS CCA 72 bp ACAGCAGCAACAACTTCATCTAGGTGGTTGGATATGTaGGTTTCCTGTGATTCTTGCATATTTTTATATACA +
Preference number: 6 (lower is better)
Translates to: TAATTSSRWLDM*VSCDSCIFLYT
Trigger: TGTATATAAAAATATGCAAGAATCACAGGAAACCCACATATCCAACCACCTAGATGAAGTTGTTGCTGCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000262074.8
ENST00000394129.6
ENST00000394132.7
ENST00000394135.7
ENST00000459771.5
ENST00000468436.1
ENST00000558078.5
ENST00000558663.5
ENST00000560235.1
ENST00000560279.5
ENST00000560772.5
ENST00000560860.5
ENST00000561365.5
CDS CCA 72 bp AAAAGAATGAATGATAGAGCACTCACCAATAGCGAGTaGAGAAGAGTATTTTGTCGAAGTTTGCAAACCAAT +
Preference number: 6 (lower is better)
Translates to: KRMNDRALTNSE*RRVFCRSLQTN
Trigger: ATTGGTTTGCAAACTTCGACAAAATACTCTTCTCCACTCGCTATTGGTGAGTGCTCTATCATTCATTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394135.7
CDS CAA 72 bp GCCCTCTGGTTCCTGCTTTATCAGTTTGGTGATTCTTaGTACAGATTGATAACCATGAAAAAGTCTAAAGTA +
Preference number: 6 (lower is better)
Translates to: ALWFLLYQFGDS*YRLITMKKSKV
Trigger: TACTTTAGACTTTTTCATGGTTATCAATCTGTACAAAGAATCACCAAACTGATAAAGCAGGAACCAGAGGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000394132.7
ENST00000394135.7
ENST00000490671.1
ENST00000558078.5
ENST00000560772.5
ENST00000560860.5
CDS CAA 72 bp CACTTCCTAAGTCATCCATCAGCATCAGCTTTTTACTaGGCGTGTAAGTGTTACGTGAATAGTATTTCTATT +
Preference number: 6 (lower is better)
Translates to: HFLSHPSASAFY*ACKCYVNSISI
Trigger: AATAGAAATACTATTCACGTAACACTTACACGCCAAGTAAAAAGCTGATGCTGATGGATGACTTAGGAAGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494567.1
CDS CAA 90 bp CTTTTCCTTGGAATTTTCTTAAAGTGGTATCGTTGCCTGTTGATATaGAAGTTTGTCAAAGAACGTGAAATCACCAGCTTAGAGGATTTT +
Preference number: 6 (lower is better)
Translates to: LFLGIFLKWYRCLLI*KFVKEREITSLEDF
Trigger: AAAATCCTCTAAGCTGGTGATTTCACGTTCTTTGACAAACTTCAATATCAACAGGCAACGATACCACTTTAAGAAAATTCCAAGGAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394129.6
ENST00000394135.7
ENST00000558663.5
CDS CAA 90 bp TTCCAATCACACTTCCTAAGTCATCCATCAGCATCAGCTTTTTACTaGGCGTGTAAGTGTTACGTGAATAGTATTTCTATTTGTAAAAGT +
Preference number: 6 (lower is better)
Translates to: FQSHFLSHPSASAFY*ACKCYVNSISICKS
Trigger: ACTTTTACAAATAGAAATACTATTCACGTAACACTTACACGCCAAGTAAAAAGCTGATGCTGATGGATGACTTAGGAAGTGTGATTGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494567.1
CDS CAA 72 bp TTCCTGCTTTATCAGTTTGGTGATTCTTTGTACAGATaGATAACCATGAAAAAGTCTAAAGTAGGGCAGTTC +
Preference number: 6 (lower is better)
Translates to: FLLYQFGDSLYR*ITMKKSKVGQF
Trigger: GAACTGCCCTACTTTAGACTTTTTCATGGTTATCAATCTGTACAAAGAATCACCAAACTGATAAAGCAGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000394132.7
ENST00000394135.7
ENST00000490671.1
ENST00000558078.5
ENST00000560772.5
ENST00000560860.5
CDS CAA 72 bp GGAATTTTCTTAAAGTGGTATCGTTGCCTGTTGATATaGAAGTTTGTCAAAGAACGTGAAATCACCAGCTTA +
Preference number: 6 (lower is better)
Translates to: GIFLKWYRCLLI*KFVKEREITSL
Trigger: TAAGCTGGTGATTTCACGTTCTTTGACAAACTTCAATATCAACAGGCAACGATACCACTTTAAGAAAATTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394129.6
ENST00000394135.7
ENST00000558663.5
CDS CAA 72 bp TTCCTTGGAATTTTCTTAAAGTGGTATCGTTGCCTGTaGATATTGAAGTTTGTCAAAGAACGTGAAATCACC +
Preference number: 6 (lower is better)
Translates to: FLGIFLKWYRCL*ILKFVKEREIT
Trigger: GGTGATTTCACGTTCTTTGACAAACTTCAATATCAACAGGCAACGATACCACTTTAAGAAAATTCCAAGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394129.6
ENST00000394135.7
ENST00000558663.5