RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TTC21A (Homo sapiens)

Ensembl gene IDs: ENSG00000168026

Ensembl transcript IDs: ENST00000425163.5, ENST00000430597.6, ENST00000431162.6, ENST00000431559.5, ENST00000440121.1, ENST00000459702.1, ENST00000465962.1, ENST00000466875.1, ENST00000471025.1, ENST00000472866.6, ENST00000473587.1, ENST00000479954.5, ENST00000481734.1, ENST00000490036.5, ENST00000490245.1, ENST00000493337.5, ENST00000493856.5, ENST00000683103.1

Found 759 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATTGCACACAGCGCCGCAGCAGTTCTAAGGCGAGGTCGAACTTGCTaGCCTGGCAGTAAATGTCAGCCAGCAGGAGCCAGCTCTTCTCCA +
Preference number: 1 (lower is better)
Translates to: IAHSAAAVLRRGRTC*PGSKCQPAGASSSP
Trigger: TGGAGAAGAGCTGGCTCCTGCTGGCTGACATTTACTGCCAGGGCAGCAAGTTCGACCTCGCCTTAGAACTGCTGCGGCGCTGTGTGCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
3UTR GCA 90 bp TGTATTGCACACAGCGCCGCAGCAGTTCTAAGGCGAGGTCGAACTTaGTGCCCTGGCAGTAAATGTCAGCCAGCAGGAGCCAGCTCTTCT +
Preference number: 1 (lower is better)
Translates to: CIAHSAAAVLRRGRT*CPGSKCQPAGASSS
Trigger: AGAAGAGCTGGCTCCTGCTGGCTGACATTTACTGCCAGGGCAGCAAGTTCGACCTCGCCTTAGAACTGCTGCGGCGCTGTGTGCAATACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
3UTR GCA 90 bp GTTGGCGTGATGACTGTACTTCCAGGCCAGTTTGTAGTTGGTGACTaGATCCTTGTAGGACTGCTCCTTCTCCATGATGAAGCCCATGTA +
Preference number: 1 (lower is better)
Translates to: VGVMTVLPGQFVVGD*ILVGLLLLHDEAHV
Trigger: TACATGGGCTTCATCATGGAGAAGGAGCAGTCCTACAAGGATGCAGTCACCAACTACAAACTGGCCTGGAAGTACAGTCATCACGCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
3UTR-3UTR GCA 90 bp TTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCAGCTAGGGCCTCAGGGACCCGAGGTCGAACTTGCTaGCCTGGCAGTAAATGTCAG +
Preference number: 2 (lower is better)
Translates to: LMASTGPGPLTPARASGTRGRTC*PGSKCQ
Trigger: CTGACATTTACTGCCAGGGCAGCAAGTTCGACCTCG...GGTCCCTGAGGCCCTAGCTGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430597.6
3UTR-3UTR TCA 90 bp TTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCAGCTAGGGCCTCAGGGACCACAACTTCAGTAGGTTaGTGGCTTCTACTGGTCCAG +
Preference number: 2 (lower is better)
Translates to: LMASTGPGPLTPARASGTTTSVG*WLLLVQ
Trigger: CTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGT...GGTCCCTGAGGCCCTAGCTGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430597.6
3UTR-3UTR CCA 90 bp GTGATGACTGTACTTCCAGGCCAGTTTGTAGTTGGTGACTGCATCCTTGTAGGAGTTGATGGCTTCTACTaGTCCAGGCCCCTTGACCCC +
Preference number: 2 (lower is better)
Translates to: VMTVLPGQFVVGDCILVGVDGFY*SRPLDP
Trigger: GGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAAC...TCCTACAAGGATGCAGTCACCAACTACAAACTGGCCTGGAAGTACAGTCATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430597.6
3UTR-3UTR CCA 90 bp TCGGGGTGCTCCCTGAGGACATCGTTGCAGATTTCAATGGCCTCCACAAATTTCAGCCAATGGCAGGGTTaGCGTGATGACTGTACTTCC +
Preference number: 2 (lower is better)
Translates to: SGCSLRTSLQISMASTNFSQWQG*RDDCTS
Trigger: GGAAGTACAGTCATCACGCCAACCCTGCCATTGGCT...GAAATTTGTGGAGGCCATTGAAATCTGCAACGATGTCCTCAGGGAGCACCCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430597.6
3UTR CAA 90 bp TCTCTGAAGCCTCTAGAAATCTTCAGCATGCGGTCAATGTACTCTTaGGCCTTGTCATGGCGGCCTATGAGCCAGAGGAAAAGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: SLKPLEIFSMRSMYS*ALSWRPMSQRKRPA
Trigger: TGCTGGCCTTTTCCTCTGGCTCATAGGCCGCCATGACAAGGCCAAAGAGTACATTGACCGCATGCTGAAGATTTCTAGAGGCTTCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425163.5
3UTR-3UTR GCA 90 bp GTGCTCCCTGAGGACATCGTTGCAGATTTCAATGGCCTCCACAAATTTCTTGTCCAGGACTTGTTGTATTaGACACAGCGCCGCAGCAGT +
Preference number: 2 (lower is better)
Translates to: VLPEDIVADFNGLHKFLVQDLLY*TQRRSS
Trigger: ACTGCTGCGGCGCTGTGTGCAATACAACAAGTCCTG...GACAAGAAATTTGTGGAGGCCATTGAAATCTGCAACGATGTCCTCAGGGAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
3UTR-3UTR TCA 90 bp GTGCTCCCTGAGGACATCGTTGCAGATTTCAATGGCCTCCACAAATTTCTTGTCCCAGTTTGTAGTTGGTaGCTGCATCCTTGTAGGACT +
Preference number: 2 (lower is better)
Translates to: VLPEDIVADFNGLHKFLVPVCSW*LHPCRT
Trigger: AGTCCTACAAGGATGCAGTCACCAACTACAAACTGG...GACAAGAAATTTGTGGAGGCCATTGAAATCTGCAACGATGTCCTCAGGGAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
3UTR-3UTR GCA 90 bp AAGCCTCTAGAAATCTTCAGCATGCGGTCAATGTACTCTTTGGCCTTGTCATGGGCCAGCATAGTACAGTaGAGTCCCACTGACTGTCTT +
Preference number: 2 (lower is better)
Translates to: KPLEIFSMRSMYSLALSWASIVQ*SPTDCL
Trigger: AAGACAGTCAGTGGGACTGCACTGTACTATGCTGGC...CCATGACAAGGCCAAAGAGTACATTGACCGCATGCTGAAGATTTCTAGAGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425163.5
3UTR GCA 72 bp AGCGCCGCAGCAGTTCTAAGGCGAGGTCGAACTTGCTaGCCTGGCAGTAAATGTCAGCCAGCAGGAGCCAGC +
Preference number: 3 (lower is better)
Translates to: SAAAVLRRGRTC*PGSKCQPAGAS
Trigger: GCTGGCTCCTGCTGGCTGACATTTACTGCCAGGGCAGCAAGTTCGACCTCGCCTTAGAACTGCTGCGGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
3UTR GCA 72 bp CACAGCGCCGCAGCAGTTCTAAGGCGAGGTCGAACTTaGTGCCCTGGCAGTAAATGTCAGCCAGCAGGAGCC +
Preference number: 3 (lower is better)
Translates to: HSAAAVLRRGRT*CPGSKCQPAGA
Trigger: GGCTCCTGCTGGCTGACATTTACTGCCAGGGCAGCAAGTTCGACCTCGCCTTAGAACTGCTGCGGCGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
3UTR GCA 72 bp GCCTATGAGCCAGAGGAAAAGGCCAGCATAGTACAGTaGAGTCCCACTGACTGTCTTGCGTATTTCCTTCAG +
Preference number: 3 (lower is better)
Translates to: AYEPEEKASIVQ*SPTDCLAYFLQ
Trigger: CTGAAGGAAATACGCAAGACAGTCAGTGGGACTGCACTGTACTATGCTGGCCTTTTCCTCTGGCTCATAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425163.5
3UTR-3UTR CAA 90 bp GAAGCCCATGTACTCATAGGCCTTGTAGCAGGACTTGTTGTATTGCACACAGCGCACAACTTCAGTAGGTaGATGGCTTCTACTGGTCCA +
Preference number: 3 (lower is better)
Translates to: EAHVLIGLVAGLVVLHTAHNFSR*MASTGP
Trigger: TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTG...CGCTGTGTGCAATACAACAAGTCCTGCTACAAGGCCTATGAGTACATGGGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
3UTR GCA 72 bp ATGACTGTACTTCCAGGCCAGTTTGTAGTTGGTGACTaGATCCTTGTAGGACTGCTCCTTCTCCATGATGAA +
Preference number: 3 (lower is better)
Translates to: MTVLPGQFVVGD*ILVGLLLLHDE
Trigger: TTCATCATGGAGAAGGAGCAGTCCTACAAGGATGCAGTCACCAACTACAAACTGGCCTGGAAGTACAGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
3UTR GCA 72 bp GTAGCTGTGGTCATGTTTCCTTCTCTTGCAAGCTCATaGACGGTTAGAATTTGGCAGGCATCAATATTGCTC +
Preference number: 3 (lower is better)
Translates to: VAVVMFPSLASS*TVRIWQASILL
Trigger: GAGCAATATTGATGCCTGCCAAATTCTAACCGTGCATGAGCTTGCAAGAGAAGGAAACATGACCACAGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431559.5
CDS-3UTR CCA 90 bp TATTGCACACAGCGCCGCAGCAGTTCTAAGGCGAGGTCGAACTTGCTGCCCTGGCTCCGAGTCCGGGTCTaGTGGGGCGGTGCAGAGCGG +
Preference number: 4 (lower is better)
Translates to: YCTQRRSSSKARSNLLPWLRVRV*WGGAER
Trigger: CCGCTCTGCACCGCCCCACCAGACCCGGACTCGGAG...CCAGGGCAGCAAGTTCGACCTCGCCTTAGAACTGCTGCGGCGCTGTGTGCAATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp TTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCAGCTAGGGCCTCAGGGACCGCACCCAGGGGGTCTTaGCCAGGCGCTTCAACTGCA +
Preference number: 4 (lower is better)
Translates to: LMASTGPGPLTPARASGTAPRGS*PGASTA
Trigger: TGCAGTTGAAGCGCCTGGCCAAGACCCCCTGGGTGC...GGTCCCTGAGGCCCTAGCTGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR TCA 90 bp TCTACTGGTCCAGGCCCCTTGACCCCAGCTAGGGCCTCAGGGACCTTCGGGCCTCCTAGAATCACCTGGTaGCTCCCACACAGTCGGCTA +
Preference number: 4 (lower is better)
Translates to: STGPGPLTPARASGTFGPPRITW*LPHSRL
Trigger: TAGCCGACTGTGTGGGAGTCACCAGGTGATTCTAGG...AGGCCCGAAGGTCCCTGAGGCCCTAGCTGGGGTCAAGGGGCCTGGACCAGTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCCCCGAGGCAGGGTCGTaGGCACTCTATCGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPPEAGS*ALYRGG
Trigger: CCCGCCGCGATAGAGTGCCCACGACCCTGCCTCGGG...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000430597.6
ENST00000431162.6
CDS-3UTR GCA 90 bp AGGCGAGGTCGAACTTGCTGCCCTGGCAGTAAATGTCAGCCAGCAGGAGCCAGCCGCTCTGGCCCCAAGTaGTGTCCTTGCGTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: RRGRTCCPGSKCQPAGASRSGPK*CPCVPC
Trigger: ACAAGGCACGCAAGGACAGCACTTGGGGCCAGAGCG...GCTGGCTCCTGCTGGCTGACATTTACTGCCAGGGCAGCAAGTTCGACCTCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCCGAGTCCGGGTCTGGTaGGGCGGTGCAGAGCGGGAT +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPRVRVW*GGAERD
Trigger: ATCCCGCTCTGCACCGCCCCACCAGACCCGGACTCG...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430597.6
ENST00000431162.6
3UTR CAA 72 bp TTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTaGACCCCAGCTAGGGCCTCAGGGACCTTCGGGCCT +
Preference number: 4 (lower is better)
Translates to: FSRLMASTGPGP*TPARASGTFGP
Trigger: AGGCCCGAAGGTCCCTGAGGCCCTAGCTGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR TCA 90 bp TGTATTGCACACAGCGCCGCAGCAGTTCTAAGGCGAGGTCGAACTTGCTGCCCTAGTGTGGGGCTTGTCTaGGGTCAGGTCCACCCAGCC +
Preference number: 4 (lower is better)
Translates to: CIAHSAAAVLRRGRTCCPSVGLV*GQVHPA
Trigger: GGCTGGGTGGACCTGACCTCAGACAAGCCCCACACT...AGGGCAGCAAGTTCGACCTCGCCTTAGAACTGCTGCGGCGCTGTGTGCAATACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR TCA 90 bp AGGCGAGGTCGAACTTGCTGCCCTGGCAGTAAATGTCAGCCAGCAGGAGCCAGCAGAGGCGCCTGTCTCTaGGGGTCTGCAGGTAGATGT +
Preference number: 4 (lower is better)
Translates to: RRGRTCCPGSKCQPAGASRGACL*GSAGRC
Trigger: ACATCTACCTGCAGACCCTCAGAGACAGGCGCCTCT...GCTGGCTCCTGCTGGCTGACATTTACTGCCAGGGCAGCAAGTTCGACCTCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR TCA 90 bp AGGCGAGGTCGAACTTGCTGCCCTGGCAGTAAATGTCAGCCAGCAGGAGCCAGCGCTCACGGTAGCATCTaGTGTAGAGGCGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: RRGRTCCPGSKCQPAGASAHGSI*CRGACL
Trigger: GAGACAGGCGCCTCTACATCAGATGCTACCGTGAGC...GCTGGCTCCTGCTGGCTGACATTTACTGCCAGGGCAGCAAGTTCGACCTCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGGGTCTGGTGGGGCGGTaGAGAGCGGGATTCCCGAGG +
Preference number: 4 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLGLVGR*RAGFPR
Trigger: CCTCGGGAATCCCGCTCTGCACCGCCCCACCAGACC...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430597.6
ENST00000431162.6
CDS-3UTR GCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCAGCCGGCAGAGGCCCTaGAGCAGCCGCAGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGSRQRP*SSRSWV
Trigger: GACCCAGCTGCGGCTGCTGCAGGGCCTCTGCCGGCT...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp TCTACTGGTCCAGGCCCCTTGACCCCAGCTAGGGCCTCAGGGACCTTCGGGCCTGCCTGCTGCACATGGTaGAAGTACTTTTCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: STGPGPLTPARASGTFGPACCTW*KYFSWL
Trigger: TAGCCAGGAAAAGTACTTCCACCATGTGCAGCAGGC...AGGCCCGAAGGTCCCTGAGGCCCTAGCTGGGGTCAAGGGGCCTGGACCAGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp TTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCAGCTAGGGCCTCAGGGACCTCTTTGGCCTTGTCATaGCGGCCTATGAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LMASTGPGPLTPARASGTSLALS*RPMSQR
Trigger: CCTCTGGCTCATAGGCCGCCATGACAAGGCCAAAGA...GGTCCCTGAGGCCCTAGCTGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCCGCCCAGTAGCAGGCTaGTGTGGGGGCCAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPRPVAG*CGGQAD
Trigger: ATCTGCCTGGCCCCCACACCAGCCTGCTACTGGGCG...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCACGCCCAGTAGCAGGCTaGTGTGGGGGCCAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPRPVAG*CGGQAD
Trigger: ATCTGCCTGGCCCCCACACCAGCCTGCTACTGGGCG...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCGCCCAGTAGCAGGCTaGTGTGGGGGCCAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTRPVAG*CGGQAD
Trigger: ATCTGCCTGGCCCCCACACCAGCCTGCTACTGGGCG...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCAGTGTGGGGCTTGTCTaGGGTCAGGTCCACCCAGCC +
Preference number: 4 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTSVGLV*GQVHPA
Trigger: GGCTGGGTGGACCTGACCTCAGACAAGCCCCACACT...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430597.6
ENST00000431162.6
CDS-3UTR TCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCCCTGCGCTATCTGGATaGAGCTGCCCAGCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPPALSG*SCPAQP
Trigger: AGGCTGCGCTGGGCAGCTTCATCCAGATAGCGCAGG...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCACCTGCGCTATCTGGATaGAGCTGCCCAGCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPPALSG*SCPAQP
Trigger: AGGCTGCGCTGGGCAGCTTCATCCAGATAGCGCAGG...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp GTCATGGCGGCCTATGAGCCAGAGGAAAAGGCCAGCATAGTACAGTGCAGTCCCTGGGTCAGGCCTGGTTaGGCATGGTGGCACTCACCA +
Preference number: 4 (lower is better)
Translates to: VMAAYEPEEKASIVQCSPWVRPG*AWWHSP
Trigger: TGGTGAGTGCCACCATGCTCAACCAGGCCTGACCCA...GGGACTGCACTGTACTATGCTGGCCTTTTCCTCTGGCTCATAGGCCGCCATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS-3UTR GCA 90 bp TTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCAGCTAGGGCCTCAGGGACCGAGGGATGCCTTGCATaGTGGAGAAGTGAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LMASTGPGPLTPARASGTEGCLA*WRSEAP
Trigger: TGGAGCTTCACTTCTCCAGCATGCAAGGCATCCCTC...GGTCCCTGAGGCCCTAGCTGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp AGGCGAGGTCGAACTTGCTGCCCTGGCAGTAAATGTCAGCCAGCAGGAGCCAGCTGGTTCTGCTCAGTCTaGAGGAGGATGGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: RRGRTCCPGSKCQPAGASWFCSV*RRMAQC
Trigger: GCACTGTGCCATCCTCCTGCAGACTGAGCAGAACCA...GCTGGCTCCTGCTGGCTGACATTTACTGCCAGGGCAGCAAGTTCGACCTCGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp TTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCAGCTAGGGCCTCAGGGACCCCCAAGTGCTGTCCTTaGGTGCCTTGTTCAGGAACT +
Preference number: 4 (lower is better)
Translates to: LMASTGPGPLTPARASGTPKCCP*VPCSGT
Trigger: AGTTCCTGAACAAGGCACGCAAGGACAGCACTTGGG...GGTCCCTGAGGCCCTAGCTGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp TCTACTGGTCCAGGCCCCTTGACCCCAGCTAGGGCCTCAGGGACCTTCGGGCCTTCTTCTCCATGTAGTTaGTCTCAGCTCCCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: STGPGPLTPARASGTFGPSSPCS*SQLPGS
Trigger: AGAACCAGGGAGCTGAGAGCAACTACATGGAGAAGA...AGGCCCGAAGGTCCCTGAGGCCCTAGCTGGGGTCAAGGGGCCTGGACCAGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAAGCCGGCAGAGGCCCTaGAGCAGCCGCAGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPSRQRP*SSRSWV
Trigger: GACCCAGCTGCGGCTGCTGCAGGGCCTCTGCCGGCT...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCTCCGAGTCCGGGTCTaGTGGGGCGGTGCAGAGCGG +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGLRVRV*WGGAER
Trigger: CCGCTCTGCACCGCCCCACCAGACCCGGACTCGGAG...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431162.6
CDS-3UTR CCA 90 bp AGGCGAGGTCGAACTTGCTGCCCTGGCAGTAAATGTCAGCCAGCAGGAGCCAGCCGGACCTGGAAGTTGTaGCTGACACCCAGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: RRGRTCCPGSKCQPAGASRTWKL*LTPSSK
Trigger: CTTAGAGCTGGGTGTCAGCCACAACTTCCAGGTCCG...GCTGGCTCCTGCTGGCTGACATTTACTGCCAGGGCAGCAAGTTCGACCTCGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp GTCGAACTTGCTGCCCTGGCAGTAAATGTCAGCCAGCAGGAGCCAGCTCTTCTCCGTGCCCAATTCTGCTaGCCAGGGAGGCGTCATGTG +
Preference number: 4 (lower is better)
Translates to: VELAALAVNVSQQEPALLRAQFC*PGRRHV
Trigger: CACATGACGCCTCCCTGGCCAGCAGAATTGGGCACG...GAGAAGAGCTGGCTCCTGCTGGCTGACATTTACTGCCAGGGCAGCAAGTTCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp TTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCAGCTAGGGCCTCAGGGACCACTTTAAGGCTTCGTTaGGCTGCCCTATGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LMASTGPGPLTPARASGTTLRLR*AALCAS
Trigger: GCTGGCACATAGGGCAGCCCAACGAAGCCTTAAAGT...GGTCCCTGAGGCCCTAGCTGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR TCA 90 bp AGGCGAGGTCGAACTTGCTGCCCTGGCAGTAAATGTCAGCCAGCAGGAGCCAGCAGTAGATCTGACACATaGGGAGATGGGCATCCACGG +
Preference number: 4 (lower is better)
Translates to: RRGRTCCPGSKCQPAGASSRSDT*GDGHPR
Trigger: CCGTGGATGCCCATCTCCTCATGTGTCAGATCTACT...GCTGGCTCCTGCTGGCTGACATTTACTGCCAGGGCAGCAAGTTCGACCTCGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCTTCCAGGCCCACAGCTaGAGCCTGCTGCACATGGTG +
Preference number: 4 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTFQAHS*SLLHMV
Trigger: CACCATGTGCAGCAGGCTGCAGCTGTGGGCCTGGAA...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCGAACACGTAGGCTTGTaGCAAGGCCAGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPEHVGL*QGQQGR
Trigger: CCTGCCCTGCTGGCCTTGGCACAAGCCTACGTGTTC...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp GTGCTCCCTGAGGACATCGTTGCAGATTTCAATGGCCTCCACAAATTTCTTGTCCCCGAGGCAGGGTCGTaGGCACTCTATCGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: VLPEDIVADFNGLHKFLVPEAGS*ALYRGG
Trigger: CCCGCCGCGATAGAGTGCCCACGACCCTGCCTCGGG...GACAAGAAATTTGTGGAGGCCATTGAAATCTGCAACGATGTCCTCAGGGAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp GTACTTCCAGGCCAGTTTGTAGTTGGTGACTGCATCCTTGTAGGACTGCTCCTTCGAGTCCGGGTCTGGTaGGGCGGTGCAGAGCGGGAT +
Preference number: 4 (lower is better)
Translates to: VLPGQFVVGDCILVGLLLRVRVW*GGAERD
Trigger: ATCCCGCTCTGCACCGCCCCACCAGACCCGGACTCG...AAGGAGCAGTCCTACAAGGATGCAGTCACCAACTACAAACTGGCCTGGAAGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCAAGATGGATGCCCGCTaGCTAGGCTGCACAGAGGGC +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPKMDAR*LGCTEG
Trigger: GCCCTCTGTGCAGCCTAGCCAGCGGGCATCCATCTT...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCACGTGCCCAATTCTGCTaGCCAGGGAGGCGTCATGTG +
Preference number: 4 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPRAQFC*PGRRHV
Trigger: CACATGACGCCTCCCTGGCCAGCAGAATTGGGCACG...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCAGCACCATGTGGTAGATaGCGCTCTGGCCCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPAPCGR*RSGPKC
Trigger: GCACTTGGGGCCAGAGCGCCATCTACCACATGGTGC...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCATCGCGGCGGGCGGTTaGAGGCGTTACAGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGIAAGG*RRYSPW
Trigger: CCAAGGACTGTAACGCCTTCAACCGCCCGCCGCGAT...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431162.6
CDS-3UTR TCA 90 bp AGGCGAGGTCGAACTTGCTGCCCTGGCAGTAAATGTCAGCCAGCAGGAGCCAGCACACAGGGTCATTGCTaGATTTTTCCAGGCCCACAG +
Preference number: 4 (lower is better)
Translates to: RRGRTCCPGSKCQPAGASTQGHC*IFPGPQ
Trigger: CTGTGGGCCTGGAAAAATTCAGCAATGACCCTGTGT...GCTGGCTCCTGCTGGCTGACATTTACTGCCAGGGCAGCAAGTTCGACCTCGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR TCA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCTGTCATGGCGGCCTATaGGCCAGAGGAAAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTCHGGL*ARGKGQ
Trigger: CTGGCCTTTTCCTCTGGCTCATAGGCCGCCATGACA...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp TGTATTGCACACAGCGCCGCAGCAGTTCTAAGGCGAGGTCGAACTTGCTGCCCTCCACGTTGGCAATGGTaGTGCGGTTCTCTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: CIAHSAAAVLRRGRTCCPPRWQW*CGSLLV
Trigger: CACCAGAAGAGAACCGCATCACCATTGCCAACGTGG...AGGGCAGCAAGTTCGACCTCGCCTTAGAACTGCTGCGGCGCTGTGTGCAATACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR TCA 90 bp GGCCTTGTCATGGCGGCCTATGAGCCAGAGGAAAAGGCCAGCATAGTACAGTGCTCCTTTGGCAGCCCTTaGGGGGCTGTGTTATCTCTG +
Preference number: 4 (lower is better)
Translates to: GLVMAAYEPEEKASIVQCSFGSP*GAVLSL
Trigger: CAGAGATAACACAGCCCCTCAAGGGCTGCCAAAGGA...GCACTGTACTATGCTGGCCTTTTCCTCTGGCTCATAGGCCGCCATGACAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS-3UTR GCA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCTGGTGGGGCGGTaGAGAGCGGGATTCCCGAGG +
Preference number: 4 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTGLVGR*RAGFPR
Trigger: CCTCGGGAATCCCGCTCTGCACCGCCCCACCAGACC...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431162.6
CDS-3UTR GCA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCCACAGCTGCAGCCTaGTGCACATGGTGGAAGTAC +
Preference number: 4 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTPTAAA*CTWWKY
Trigger: GTACTTCCACCATGTGCAGCAGGCTGCAGCTGTGGG...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCACCCACAGCTGCAGCCTaGTGCACATGGTGGAAGTAC +
Preference number: 4 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPPTAAA*CTWWKY
Trigger: GTACTTCCACCATGTGCAGCAGGCTGCAGCTGTGGG...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp TTTGGCCTTGTCATGGCGGCCTATGAGCCAGAGGAAAAGGCCAGCATAGTACAGTTCCAGGCCCACAGCTaGAGCCTGCTGCACATGGTG +
Preference number: 4 (lower is better)
Translates to: FGLVMAAYEPEEKASIVQFQAHS*SLLHMV
Trigger: CACCATGTGCAGCAGGCTGCAGCTGTGGGCCTGGAA...CTGTACTATGCTGGCCTTTTCCTCTGGCTCATAGGCCGCCATGACAAGGCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS-3UTR GCA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCAGTCTGCTCCCAGTCCTaGCGAGCTAAGAACAGCTGC +
Preference number: 4 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPVCSQS*RAKNSC
Trigger: GCAGCTGTTCTTAGCTCGGCAGGACTGGGAGCAGAC...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCAGCGCCACGTCCACATTaGCCTTGCTCAGGACCAAGT +
Preference number: 4 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPAPRPH*PCSGPS
Trigger: ACTTGGTCCTGAGCAAGGGCAATGTGGACGTGGCGC...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCAAGCGTGCCCAATTCTaGTGGCCAGGGAGGCGTCAT +
Preference number: 4 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTKRAQF*WPGRRH
Trigger: ATGACGCCTCCCTGGCCAGCAGAATTGGGCACGCTT...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCAAGGAGGATGGCACAGTaGTGCTCACACAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPRRMAQ*CSHRSR
Trigger: CCTGGACCTGTGTGAGCAGCACTGTGCCATCCTCCT...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGGCAGTTTCTCGGCGGTaGTCACACCCTGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLAVSRR*SHPAAP
Trigger: TGGAGCAGCAGGGTGTGAGCACCGCCGAGAAACTGC...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGGAACACGTAGGCTTGTaGCAAGGCCAGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLEHVGL*QGQQGR
Trigger: CCTGCCCTGCTGGCCTTGGCACAAGCCTACGTGTTC...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp GTCATGGCGGCCTATGAGCCAGAGGAAAAGGCCAGCATAGTACAGTGCAGTCCCTCTTTGGCCTTGTCATaGCGGCCTATGAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: VMAAYEPEEKASIVQCSPSLALS*RPMSQR
Trigger: CCTCTGGCTCATAGGCCGCCATGACAAGGCCAAAGA...GGGACTGCACTGTACTATGCTGGCCTTTTCCTCTGGCTCATAGGCCGCCATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS-3UTR CCA 90 bp TATTGCACACAGCGCCGCAGCAGTTCTAAGGCGAGGTCGAACTTGCTGCCCTGGGATAGCCCAGTTCTGTaGCCACATGGACATACGAGG +
Preference number: 4 (lower is better)
Translates to: YCTQRRSSSKARSNLLPWDSPVL*PHGHTR
Trigger: CCTCGTATGTCCATGTGGCCACAGAACTGGGCTATC...CCAGGGCAGCAAGTTCGACCTCGCCTTAGAACTGCTGCGGCGCTGTGTGCAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCCCTTCAGGAGCGCTGTaGTCTCTTCCTCCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPPSGAL*SLPPPC
Trigger: ACAAGGGGGAGGAAGAGACCACAGCGCTCCTGAAGG...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCTTCAGGAGCGCTGTaGTCTCTTCCTCCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTPSGAL*SLPPPC
Trigger: ACAAGGGGGAGGAAGAGACCACAGCGCTCCTGAAGG...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCATCTGGCCTGGTAACCTaGGCTGCTTGGGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPSGLVT*AAWGRR
Trigger: TCTTCTGCCCCAAGCAGCCCAGGTTACCAGGCCAGA...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp TTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCAGCTAGGGCCTCAGGGACCTGGCCATCTTCTCTCTaGCTTCCATATAGCAGGACT +
Preference number: 4 (lower is better)
Translates to: LMASTGPGPLTPARASGTWPSSL*LPYSRT
Trigger: AGTCCTGCTATATGGAAGCCAGAGAGAAGATGGCCA...GGTCCCTGAGGCCCTAGCTGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGCGTGCCCAATTCTGCTaGCCAGGGAGGCGTCATGTG +
Preference number: 4 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLRAQFC*PGRRHV
Trigger: CACATGACGCCTCCCTGGCCAGCAGAATTGGGCACG...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp TCTACTGGTCCAGGCCCCTTGACCCCAGCTAGGGCCTCAGGGACCTTCGGGCCTATGGATGGGATGTCTTaGACAATGTCATGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: STGPGPLTPARASGTFGPMDGMS*TMSCSS
Trigger: ACTGGAACATGACATTGTCCAAGACATCCCATCCAT...AGGCCCGAAGGTCCCTGAGGCCCTAGCTGGGGTCAAGGGGCCTGGACCAGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp TTGTTGTATTGCACACAGCGCCGCAGCAGTTCTAAGGCGAGGTCGAACTTGCTGGCACCATGTGGTAGATaGCGCTCTGGCCCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: LLYCTQRRSSSKARSNLLAPCGR*RSGPKC
Trigger: GCACTTGGGGCCAGAGCGCCATCTACCACATGGTGC...CAGCAAGTTCGACCTCGCCTTAGAACTGCTGCGGCGCTGTGTGCAATACAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGAGCCGCAGCTGGGTCTaGCTGGAGTCTGAATGTGGG +
Preference number: 4 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLSRSWV*LESECG
Trigger: CCCACATTCAGACTCCAGCCAGACCCAGCTGCGGCT...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGAGGGACACGTCTGGGTaGTGCCTGATGCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLRDTSG*CLMLSR
Trigger: CCTGGAAAGCATCAGGCATCACCCAGACGTGTCCCT...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCACACCTCCAGGGCCTCTaGGTAGTTCTGCTGCATCAT +
Preference number: 4 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPHLQGL*VVLLHH
Trigger: ATGATGCAGCAGAACTACTCAGAGGCCCTGGAGGTG...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCACCTAGAATCACCTGGTaGCTCCCACACAGTCGGCTA +
Preference number: 4 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPPRITW*LPHSRL
Trigger: TAGCCGACTGTGTGGGAGTCACCAGGTGATTCTAGG...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCACCTGGAAGTTGTGGCTaGCACCCAGCTCTAAGCAGT +
Preference number: 4 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPPGSCG*HPALSS
Trigger: ACTGCTTAGAGCTGGGTGTCAGCCACAACTTCCAGG...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCGCTGCACAGAGGGCCTaGGGAACTTTCTGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPAAQRA*GTFCLL
Trigger: AAGAAGGCAGAAAGTTCCTCAGGCCCTCTGTGCAGC...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CTTGTCATGGCGGCCTATGAGCCAGAGGAAAAGGCCAGCATAGTACAGTGCAGTCCCACAGCTGCAGCCTaGTGCACATGGTGGAAGTAC +
Preference number: 4 (lower is better)
Translates to: LVMAAYEPEEKASIVQCSPTAAA*CTWWKY
Trigger: GTACTTCCACCATGTGCAGCAGGCTGCAGCTGTGGG...ACTGCACTGTACTATGCTGGCCTTTTCCTCTGGCTCATAGGCCGCCATGACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS-3UTR GCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCTTCCAGGCCCACAGCTaGAGCCTGCTGCACATGGTG +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGFQAHS*SLLHMV
Trigger: CACCATGTGCAGCAGGCTGCAGCTGTGGGCCTGGAA...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGGTCTGCTCCCAGTCCTaGCGAGCTAAGAACAGCTGC +
Preference number: 4 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLVCSQS*RAKNSC
Trigger: GCAGCTGTTCTTAGCTCGGCAGGACTGGGAGCAGAC...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCCATTTCTACTGTCTaGTCCCAGTCCTGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTPISTV*SQSCRA
Trigger: AGCTCGGCAGGACTGGGAGCAGACAGTAGAAATGGG...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCGGCAACGCTGCAGGATaGTCTGGGCATTCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPGNAAG*SGHSLA
Trigger: AGCTAGAGAATGCCCAGAGCATCCTGCAGCGTTGCC...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp TTGTTGTATTGCACACAGCGCCGCAGCAGTTCTAAGGCGAGGTCGAACTTGCTGAAGCGTGCCCAATTCTaGTGGCCAGGGAGGCGTCAT +
Preference number: 4 (lower is better)
Translates to: LLYCTQRRSSSKARSNLLKRAQF*WPGRRH
Trigger: ATGACGCCTCCCTGGCCAGCAGAATTGGGCACGCTT...CAGCAAGTTCGACCTCGCCTTAGAACTGCTGCGGCGCTGTGTGCAATACAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTGGTTCTGCTCAGTCTaGAGGAGGATGGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPWFCSV*RRMAQC
Trigger: GCACTGTGCCATCCTCCTGCAGACTGAGCAGAACCA...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCGCGGTCTCATGGTTCTaGTCAGTCTGCAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPAVSWF*SVCRRM
Trigger: CATCCTCCTGCAGACTGAGCAGAACCATGAGACCGC...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCAGTGCTCACACCCTGCTaGTCCAACTCCTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPVLTPC*SNSFFS
Trigger: GGAGAAGAAGGAGTTGGAGCAGCAGGGTGTGAGCAC...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp TCGGGGTGCTCCCTGAGGACATCGTTGCAGATTTCAATGGCCTCCACAAATTTCGAACACGTAGGCTTGTaGCAAGGCCAGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SGCSLRTSLQISMASTNFEHVGL*QGQQGR
Trigger: CCTGCCCTGCTGGCCTTGGCACAAGCCTACGTGTTC...GAAATTTGTGGAGGCCATTGAAATCTGCAACGATGTCCTCAGGGAGCACCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCGCCAGGCGCTTCAACTaGATACGCGCCTTGGGGATC +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGARRFN*IRALGI
Trigger: GATCCCCAAGGCGCGTATGCAGTTGAAGCGCCTGGC...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp GTCGAACTTGCTGCCCTGGCAGTAAATGTCAGCCAGCAGGAGCCAGCTCTTCTCGCAGCCTGCTGCACATaGTGGAAGTACTTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: VELAALAVNVSQQEPALLAACCT*WKYFSW
Trigger: CCAGGAAAAGTACTTCCACCATGTGCAGCAGGCTGC...GAGAAGAGCTGGCTCCTGCTGGCTGACATTTACTGCCAGGGCAGCAAGTTCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTCTTTGGCCTTGTCATaGCGGCCTATGAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPSLALS*RPMSQR
Trigger: CCTCTGGCTCATAGGCCGCCATGACAAGGCCAAAGA...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGCCCCCTTGTGCTTCCTaGACATCAGGAGGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLPPCAS*TSGGLG
Trigger: TCCAAGCCCTCCTGATGTCCAGGAAGCACAAGGGGG...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp AGGCGAGGTCGAACTTGCTGCCCTGGCAGTAAATGTCAGCCAGCAGGAGCCAGCGACTTGTTTAAGAAGTaGAGACACGATCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RRGRTCCPGSKCQPAGASDLFKK*RHDLAW
Trigger: CCAGGCCAGATCGTGTCTCCACTTCTTAAACAAGTC...GCTGGCTCCTGCTGGCTGACATTTACTGCCAGGGCAGCAAGTTCGACCTCGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCGGGGTCGATCAGAGCTaGTGCTGCTTTGACTACAGG +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPGVDQS*CCFDYR
Trigger: CCTGTAGTCAAAGCAGCACCAGCTCTGATCGACCCC...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCACGGACCTGGAAGTTGTaGCTGACACCCAGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPRTWKL*LTPSSK
Trigger: CTTAGAGCTGGGTGTCAGCCACAACTTCCAGGTCCG...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCAGGGAGGCGTCATGTaGGTTCTGTCTATAGGCCTC +
Preference number: 4 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTQGGVM*VLSIGL
Trigger: GAGGCCTATAGACAGAACCCACATGACGCCTCCCTG...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCCAGTCTGCAGGAGGATaGCACAGTGCTGCTCACACA +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPQSAGG*HSAAHT
Trigger: TGTGTGAGCAGCACTGTGCCATCCTCCTGCAGACTG...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp GTCGAACTTGCTGCCCTGGCAGTAAATGTCAGCCAGCAGGAGCCAGCTCTTCTCACAGAAGCGGTCTCATaGTTCTGCTCAGTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VELAALAVNVSQQEPALLTEAVS*FCSVCR
Trigger: CCTGCAGACTGAGCAGAACCATGAGACCGCTTCTGT...GAGAAGAGCTGGCTCCTGCTGGCTGACATTTACTGCCAGGGCAGCAAGTTCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTGCACCCAGGGGGTCTTaGCCAGGCGCTTCAACTGCA +
Preference number: 4 (lower is better)
Translates to: STDPLSIPPHNFSRLMASAPRGS*PGASTA
Trigger: TGCAGTTGAAGCGCCTGGCCAAGACCCCCTGGGTGC...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGCACCCAGGGGGTCTTaGCCAGGCGCTTCAACTGCA +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPAPRGS*PGASTA
Trigger: TGCAGTTGAAGCGCCTGGCCAAGACCCCCTGGGTGC...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGGTTGATGGCTTCTACTaGTCCAGGCCCCTTGACCCC +
Preference number: 4 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLVDGFY*SRPLDP
Trigger: GGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAAC...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
3UTR CAA 72 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTaGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCA +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSR*MASTGPGPLTP
Trigger: TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTCCCTGAAGTCACAGTaGTCTGGTTCACCACCTCCA +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPSLKSQ*SGSPPP
Trigger: TGGAGGTGGTGAACCAGATCACTGTGACTTCAGGGA...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCTGGCAGGAAGCTCCCTaGAGTCACAGTGATCTGGTT +
Preference number: 4 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTWQEAP*SHSDLV
Trigger: AACCAGATCACTGTGACTTCAGGGAGCTTCCTGCCA...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp TATTGCACACAGCGCCGCAGCAGTTCTAAGGCGAGGTCGAACTTGCTGCCCTGGGAGCTGGTGCTGCTTTaGCTACAGGATTCAAGATCA +
Preference number: 4 (lower is better)
Translates to: YCTQRRSSSKARSNLLPWELVLL*LQDSRS
Trigger: TGATCTTGAATCCTGTAGTCAAAGCAGCACCAGCTC...CCAGGGCAGCAAGTTCGACCTCGCCTTAGAACTGCTGCGGCGCTGTGTGCAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR TCA 90 bp AGCAAGTTTGAAGCCAATGGCAGGGTTGGCGTGATGACTGTACTTCCAGGCCAGCCTGGAAGTTGTGGCTaGCACCCAGCTCTAAGCAGT +
Preference number: 4 (lower is better)
Translates to: SKFEANGRVGVMTVLPGQPGSCG*HPALSS
Trigger: ACTGCTTAGAGCTGGGTGTCAGCCACAACTTCCAGG...CTGGCCTGGAAGTACAGTCATCACGCCAACCCTGCCATTGGCTTCAAACTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR TCA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGCCACGTTGGCAATGGTaGTGCGGTTCTCTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLPRWQW*CGSLLV
Trigger: CACCAGAAGAGAACCGCATCACCATTGCCAACGTGG...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCGCTCACGGTAGCATCTaGTGTAGAGGCGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGAHGSI*CRGACL
Trigger: GAGACAGGCGCCTCTACATCAGATGCTACCGTGAGC...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCGGTCTGGCTGGAGTCTaGATGTGGGTAAAACTCACG +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPGLAGV*MWVKLT
Trigger: CGTGAGTTTTACCCACATTCAGACTCCAGCCAGACC...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp AGCATAGTACAGTGCAGTCCCACTGACTGTCTTGCGTATTTCCTTCAGGCTGTAGGGAGGAGTCATTGCTaGTCATCTCGGGCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: SIVQCSPTDCLAYFLQAVGRSHC*SSRAAR
Trigger: GCGAGCGGCCCGAGATGAGCAGCAATGACTCCTCCC...TACAGCCTGAAGGAAATACGCAAGACAGTCAGTGGGACTGCACTGTACTATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS-3UTR GCA 90 bp GGCCTTGTCATGGCGGCCTATGAGCCAGAGGAAAAGGCCAGCATAGTACAGTGCGCCAGCATAGTACAGTaGAGTCCCACTGACTGTCTT +
Preference number: 4 (lower is better)
Translates to: GLVMAAYEPEEKASIVQCASIVQ*SPTDCL
Trigger: AAGACAGTCAGTGGGACTGCACTGTACTATGCTGGC...GCACTGTACTATGCTGGCCTTTTCCTCTGGCTCATAGGCCGCCATGACAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS-3UTR GCA 90 bp GTCGAACTTGCTGCCCTGGCAGTAAATGTCAGCCAGCAGGAGCCAGCTCTTCTCGCCAGCATAGTACAGTaGAGTCCCACTGACTGTCTT +
Preference number: 4 (lower is better)
Translates to: VELAALAVNVSQQEPALLASIVQ*SPTDCL
Trigger: AAGACAGTCAGTGGGACTGCACTGTACTATGCTGGC...GAGAAGAGCTGGCTCCTGCTGGCTGACATTTACTGCCAGGGCAGCAAGTTCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCACGAGCTAAGAACAGCTaGATCTTCAGGACGAGGGCT +
Preference number: 4 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPRAKNS*IFRTRA
Trigger: AGCCCTCGTCCTGAAGATGCAGCTGTTCTTAGCTCG...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCGTCTGCTCCCAGTCCTaGCGAGCTAAGAACAGCTGC +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGVCSQS*RAKNSC
Trigger: GCAGCTGTTCTTAGCTCGGCAGGACTGGGAGCAGAC...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp AGGCCTTGTAGCAGGACTTGTTGTATTGCACACAGCGCCGCAGCAGTTCTAAGGCCCATTTCTACTGTCTaGTCCCAGTCCTGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: RPCSRTCCIAHSAAAVLRPISTV*SQSCRA
Trigger: AGCTCGGCAGGACTGGGAGCAGACAGTAGAAATGGG...CCTTAGAACTGCTGCGGCGCTGTGTGCAATACAACAAGTCCTGCTACAAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGCCCATTTCTACTGTCTaGTCCCAGTCCTGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLPISTV*SQSCRA
Trigger: AGCTCGGCAGGACTGGGAGCAGACAGTAGAAATGGG...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCAGCTCCAGGCAACGCTaGAGGATGCTCTGGGCATTC +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGSSRQR*RMLWAF
Trigger: GAATGCCCAGAGCATCCTGCAGCGTTGCCTGGAGCT...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCAAGCAGTGGAAGCACATaGCAAAGTTGCCCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPSSGST*QSCPEP
Trigger: TGGCTCAGGGCAACTTTGGCATGTGCTTCCACTGCT...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp AGGCCTTGTAGCAGGACTTGTTGTATTGCACACAGCGCCGCAGCAGTTCTAAGGCGTCCACATTGCCCTTaGTCAGGACCAAGTCCACGT +
Preference number: 4 (lower is better)
Translates to: RPCSRTCCIAHSAAAVLRRPHCP*SGPSPR
Trigger: ACGTGGACTTGGTCCTGAGCAAGGGCAATGTGGACG...CCTTAGAACTGCTGCGGCGCTGTGTGCAATACAACAAGTCCTGCTACAAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCGCGCCACGTCCACATTaGCCTTGCTCAGGACCAAGT +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGAPRPH*PCSGPS
Trigger: ACTTGGTCCTGAGCAAGGGCAATGTGGACGTGGCGC...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCATCTCGGGCTCCAGAATaGTCATTAAGGCATCGCCCA +
Preference number: 4 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPSRAPE*SLRHRP
Trigger: TGGGCGATGCCTTAATGAGCATTCTGGAGCCCGAGA...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCCCCAAGTGCTGTCCTTaGGTGCCTTGTTCAGGAACT +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPPKCCP*VPCSGT
Trigger: AGTTCCTGAACAAGGCACGCAAGGACAGCACTTGGG...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCGCTCTGGCCCCAAGTaGTGTCCTTGCGTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGRSGPK*CPCVPC
Trigger: ACAAGGCACGCAAGGACAGCACTTGGGGCCAGAGCG...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCACGCTCTGGCCCCAAGTaGTGTCCTTGCGTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPRSGPK*CPCVPC
Trigger: ACAAGGCACGCAAGGACAGCACTTGGGGCCAGAGCG...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGGTGCTCACACCCTGCTaGTCCAACTCCTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLVLTPC*SNSFFS
Trigger: GGAGAAGAAGGAGTTGGAGCAGCAGGGTGTGAGCAC...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTGCAGTTTCTCGGCGGTaGTCACACCCTGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: STDPLSIPPHNFSRLMASAVSRR*SHPAAP
Trigger: TGGAGCAGCAGGGTGTGAGCACCGCCGAGAAACTGC...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTGCCAGGCGCTTCAACTaGATACGCGCCTTGGGGATC +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGARRFN*IRALGI
Trigger: GATCCCCAAGGCGCGTATGCAGTTGAAGCGCCTGGC...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCCGAGGTCGAACTTGCTaGCCTGGCAGTAAATGTCAG +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPRGRTC*PGSKCQ
Trigger: CTGACATTTACTGCCAGGGCAGCAAGTTCGACCTCG...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCGAGGTCGAACTTGCTaGCCTGGCAGTAAATGTCAG +
Preference number: 4 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTRGRTC*PGSKCQ
Trigger: CTGACATTTACTGCCAGGGCAGCAAGTTCGACCTCG...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp GTCATGGCGGCCTATGAGCCAGAGGAAAAGGCCAGCATAGTACAGTGCAGTCCCCTCAAGCTCCTGAATTaGTTCTCGGTCTCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: VMAAYEPEEKASIVQCSPLKLLN*FSVSFG
Trigger: GCCAAAGGAGACCGAGAAGCAATTCAGGAGCTTGAG...GGGACTGCACTGTACTATGCTGGCCTTTTCCTCTGGCTCATAGGCCGCCATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS-3UTR CCA 90 bp ATGTTTCCTTCTCTTGCAAGCTCATGCACGGTTAGAATTTGGCAGGCATCAATACCCGAGGCAGGGTCGTaGGCACTCTATCGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: MFPSLASSCTVRIWQASIPEAGS*ALYRGG
Trigger: CCCGCCGCGATAGAGTGCCCACGACCCTGCCTCGGG...TATTGATGCCTGCCAAATTCTAACCGTGCATGAGCTTGCAAGAGAAGGAAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431559.5
CDS-3UTR CCA 90 bp TTTCCTTCTCTTGCAAGCTCATGCACGGTTAGAATTTGGCAGGCATCAATATTGCTCCGAGTCCGGGTCTaGTGGGGCGGTGCAGAGCGG +
Preference number: 4 (lower is better)
Translates to: FPSLASSCTVRIWQASILLRVRV*WGGAER
Trigger: CCGCTCTGCACCGCCCCACCAGACCCGGACTCGGAG...CAATATTGATGCCTGCCAAATTCTAACCGTGCATGAGCTTGCAAGAGAAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431559.5
CDS-3UTR CCA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCGATAGCCCAGTTCTGTaGCCACATGGACATACGAGG +
Preference number: 4 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTDSPVL*PHGHTR
Trigger: CCTCGTATGTCCATGTGGCCACAGAACTGGGCTATC...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCGTAACCTGGGCTGCTTaGGGCAGAAGAGCAAGTACT +
Preference number: 4 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTVTWAA*GRRAST
Trigger: AGTACTTGCTCTTCTGCCCCAAGCAGCCCAGGTTAC...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCGTAACCTGGGCTGCTTaGGGCAGAAGAGCAAGTACT +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPVTWAA*GRRAST
Trigger: AGTACTTGCTCTTCTGCCCCAAGCAGCCCAGGTTAC...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCTCTGGCCTGGTAACCTaGGCTGCTTGGGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGSGLVT*AAWGRR
Trigger: TCTTCTGCCCCAAGCAGCCCAGGTTACCAGGCCAGA...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp TCGGGGTGCTCCCTGAGGACATCGTTGCAGATTTCAATGGCCTCCACAAATTTCAGTGGAGACACGATCTaGCCTGGTAACCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SGCSLRTSLQISMASTNFSGDTI*PGNLGC
Trigger: GCAGCCCAGGTTACCAGGCCAGATCGTGTCTCCACT...GAAATTTGTGGAGGCCATTGAAATCTGCAACGATGTCCTCAGGGAGCACCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp TGCATCCTTGTAGGACTGCTCCTTCTCCATGATGAAGCCCATGTACTCATAGGCAAGATGGATGCCCGCTaGCTAGGCTGCACAGAGGGC +
Preference number: 4 (lower is better)
Translates to: CILVGLLLLHDEAHVLIGKMDAR*LGCTEG
Trigger: GCCCTCTGTGCAGCCTAGCCAGCGGGCATCCATCTT...GCCTATGAGTACATGGGCTTCATCATGGAGAAGGAGCAGTCCTACAAGGATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCACAGAAGCGGTCTCATaGTTCTGCTCAGTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTTEAVS*FCSVCR
Trigger: CCTGCAGACTGAGCAGAACCATGAGACCGCTTCTGT...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCACAGAAGCGGTCTCATaGTTCTGCTCAGTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPTEAVS*FCSVCR
Trigger: CCTGCAGACTGAGCAGAACCATGAGACCGCTTCTGT...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCGCAGTAATTGAACCCTaGTTCCAAAGGCACCCGGCT +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPAVIEP*FQRHPA
Trigger: AGCCGGGTGCCTTTGGAACCAGGGTTCAATTACTGC...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCAGCAGTAATTGAACCCTaGTTCCAAAGGCACCCGGCT +
Preference number: 4 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPAVIEP*FQRHPA
Trigger: AGCCGGGTGCCTTTGGAACCAGGGTTCAATTACTGC...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGCACCATGTGGTAGATaGCGCTCTGGCCCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPAPCGR*RSGPKC
Trigger: GCACTTGGGGCCAGAGCGCCATCTACCACATGGTGC...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCTTGCTCTCAGCTCCCTaGTTCTCAAAAGCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTLLSAP*FSKASP
Trigger: CGGAGAGGCTTTTGAGAACCAGGGAGCTGAGAGCAA...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTAGCCGCAGCTGGGTCTaGCTGGAGTCTGAATGTGGG +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGSRSWV*LESECG
Trigger: CCCACATTCAGACTCCAGCCAGACCCAGCTGCGGCT...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCTCAGCCTGCGCTATCTaGATGAAGCTGCCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGSACAI*MKLPSA
Trigger: TGCGCTGGGCAGCTTCATCCAGATAGCGCAGGCTGA...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCAACTGCATACGCGCCTTaGGGATCTGCTTCAGGAACA +
Preference number: 4 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPTAYAP*GSASGT
Trigger: TGTTCCTGAAGCAGATCCCCAAGGCGCGTATGCAGT...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp TGTTGTATTGCACACAGCGCCGCAGCAGTTCTAAGGCGAGGTCGAACTTGCTGCAGCCAATGGCAGGGTTaGCGTGATGACTGTACTTCC +
Preference number: 4 (lower is better)
Translates to: CCIAHSAAAVLRRGRTCCSQWQG*RDDCTS
Trigger: GGAAGTACAGTCATCACGCCAACCCTGCCATTGGCT...GCAGCAAGTTCGACCTCGCCTTAGAACTGCTGCGGCGCTGTGTGCAATACAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR TCA 90 bp GAGGAAAAGGCCAGCATAGTACAGTGCAGTCCCACTGACTGTCTTGCGTATTTCAGGGACACGTCTGGGTaGTGCCTGATGCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: EEKASIVQCSPTDCLAYFRDTSG*CLMLSR
Trigger: CCTGGAAAGCATCAGGCATCACCCAGACGTGTCCCT...GAAATACGCAAGACAGTCAGTGGGACTGCACTGTACTATGCTGGCCTTTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS-3UTR TCA 90 bp AAGTTTGAAGCCAATGGCAGGGTTGGCGTGATGACTGTACTTCCAGGCCAGTTTAGGGACACGTCTGGGTaGTGCCTGATGCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: KFEANGRVGVMTVLPGQFRDTSG*CLMLSR
Trigger: CCTGGAAAGCATCAGGCATCACCCAGACGTGTCCCT...AAACTGGCCTGGAAGTACAGTCATCACGCCAACCCTGCCATTGGCTTCAAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR TCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAAGGGACACGTCTGGGTaGTGCCTGATGCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPRDTSG*CLMLSR
Trigger: CCTGGAAAGCATCAGGCATCACCCAGACGTGTCCCT...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp GAGGAAAAGGCCAGCATAGTACAGTGCAGTCCCACTGACTGTCTTGCGTATTTCTGTCATGGCGGCCTATaGGCCAGAGGAAAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: EEKASIVQCSPTDCLAYFCHGGL*ARGKGQ
Trigger: CTGGCCTTTTCCTCTGGCTCATAGGCCGCCATGACA...GAAATACGCAAGACAGTCAGTGGGACTGCACTGTACTATGCTGGCCTTTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS-3UTR TCA 90 bp GTTGGTGACTGCATCCTTGTAGGACTGCTCCTTCTCCATGATGAAGCCCATGTATGTCATGGCGGCCTATaGGCCAGAGGAAAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: VGDCILVGLLLLHDEAHVCHGGL*ARGKGQ
Trigger: CTGGCCTTTTCCTCTGGCTCATAGGCCGCCATGACA...TACATGGGCTTCATCATGGAGAAGGAGCAGTCCTACAAGGATGCAGTCACCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR TCA 90 bp TATTGCACACAGCGCCGCAGCAGTTCTAAGGCGAGGTCGAACTTGCTGCCCTGGAGTTCTGCTGCATCATaGAGTACATTGCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: YCTQRRSSSKARSNLLPWSSAAS*STLPFP
Trigger: TGGGAAAGGCAATGTACTTCATGATGCAGCAGAACT...CCAGGGCAGCAAGTTCGACCTCGCCTTAGAACTGCTGCGGCGCTGTGTGCAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR TCA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGTGGCAGGAAGCTCCCTaGAGTCACAGTGATCTGGTT +
Preference number: 4 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLWQEAP*SHSDLV
Trigger: AACCAGATCACTGTGACTTCAGGGAGCTTCCTGCCA...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGAGTAGATCTGACACATaGGGAGATGGGCATCCACGG +
Preference number: 4 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLSRSDT*GDGHPR
Trigger: CCGTGGATGCCCATCTCCTCATGTGTCAGATCTACT...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCGCTGCACAGAGGGCCTaGGGAACTTTCTGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGAAQRA*GTFCLL
Trigger: AAGAAGGCAGAAAGTTCCTCAGGCCCTCTGTGCAGC...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTAGAGGCGCCTGTCTCTaGGGGTCTGCAGGTAGATGT +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGRGACL*GSAGRC
Trigger: ACATCTACCTGCAGACCCTCAGAGACAGGCGCCTCT...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAAGAGGCGCCTGTCTCTaGGGGTCTGCAGGTAGATGT +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPRGACL*GSAGRC
Trigger: ACATCTACCTGCAGACCCTCAGAGACAGGCGCCTCT...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGCTCACGGTAGCATCTaGTGTAGAGGCGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPAHGSI*CRGACL
Trigger: GAGACAGGCGCCTCTACATCAGATGCTACCGTGAGC...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp ATTTCTAACGTGATTGGTAGCTGTGGTCATGTTTCCTTCTCTTGCAAGCTCATGGGTCTGGTGGGGCGGTaGAGAGCGGGATTCCCGAGG +
Preference number: 4 (lower is better)
Translates to: ISNVIGSCGHVSFSCKLMGLVGR*RAGFPR
Trigger: CCTCGGGAATCCCGCTCTGCACCGCCCCACCAGACC...CATGAGCTTGCAAGAGAAGGAAACATGACCACAGCTACCAATCACGTTAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431559.5
CDS-3UTR GCA 90 bp CTGAGGACATCGTTGCAGATTTCAATGGCCTCCACAAATTTCTTGTCCTTCAGGGGGAGGAGTCATTGCTaGTCATCTCGGGCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: LRTSLQISMASTNFLSFRGRSHC*SSRAAR
Trigger: GCGAGCGGCCCGAGATGAGCAGCAATGACTCCTCCC...CCTGAAGGACAAGAAATTTGTGGAGGCCATTGAAATCTGCAACGATGTCCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCACAGCTGCAGCCTGCTaGACATGGTGGAAGTACTTT +
Preference number: 4 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTTAAAC*TWWKYF
Trigger: AAAGTACTTCCACCATGTGCAGCAGGCTGCAGCTGT...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp GTGCTCCCTGAGGACATCGTTGCAGATTTCAATGGCCTCCACAAATTTCTTGTCTTCCAGGCCCACAGCTaGAGCCTGCTGCACATGGTG +
Preference number: 4 (lower is better)
Translates to: VLPEDIVADFNGLHKFLVFQAHS*SLLHMV
Trigger: CACCATGTGCAGCAGGCTGCAGCTGTGGGCCTGGAA...GACAAGAAATTTGTGGAGGCCATTGAAATCTGCAACGATGTCCTCAGGGAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp AGCAAGTTTGAAGCCAATGGCAGGGTTGGCGTGATGACTGTACTTCCAGGCCAGCGAGCTAAGAACAGCTaGATCTTCAGGACGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SKFEANGRVGVMTVLPGQRAKNS*IFRTRA
Trigger: AGCCCTCGTCCTGAAGATGCAGCTGTTCTTAGCTCG...CTGGCCTGGAAGTACAGTCATCACGCCAACCCTGCCATTGGCTTCAAACTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp AGGCCTTGTAGCAGGACTTGTTGTATTGCACACAGCGCCGCAGCAGTTCTAAGGCAGAGCCAAGAGGGATaGCTTGCATGCTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: RPCSRTCCIAHSAAAVLRQSQEG*LACWRS
Trigger: ACTTCTCCAGCATGCAAGGCATCCCTCTTGGCTCTG...CCTTAGAACTGCTGCGGCGCTGTGTGCAATACAACAAGTCCTGCTACAAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp GAAGCCCATGTACTCATAGGCCTTGTAGCAGGACTTGTTGTATTGCACACAGCGAGCTCCAGGCAACGCTaGAGGATGCTCTGGGCATTC +
Preference number: 4 (lower is better)
Translates to: EAHVLIGLVAGLVVLHTASSRQR*RMLWAF
Trigger: GAATGCCCAGAGCATCCTGCAGCGTTGCCTGGAGCT...CGCTGTGTGCAATACAACAAGTCCTGCTACAAGGCCTATGAGTACATGGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTAGCTCCAGGCAACGCTaGAGGATGCTCTGGGCATTC +
Preference number: 4 (lower is better)
Translates to: STDPLSIPPHNFSRLMASSSRQR*RMLWAF
Trigger: GAATGCCCAGAGCATCCTGCAGCGTTGCCTGGAGCT...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCACTTCAGGAGCAGTTTaGCCAGATCGCAGCACAGAA +
Preference number: 4 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTTSGAV*PDRSTE
Trigger: TTCTGTGCTGCGATCTGGGCAAACTGCTCCTGAAGT...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp GTTGGTGACTGCATCCTTGTAGGACTGCTCCTTCTCCATGATGAAGCCCATGTAAGGAGGATGGCACAGTaGTGCTCACACAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VGDCILVGLLLLHDEAHVRRMAQ*CSHRSR
Trigger: CCTGGACCTGTGTGAGCAGCACTGTGCCATCCTCCT...TACATGGGCTTCATCATGGAGAAGGAGCAGTCCTACAAGGATGCAGTCACCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTAGGAGGATGGCACAGTaGTGCTCACACAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGRRMAQ*CSHRSR
Trigger: CCTGGACCTGTGTGAGCAGCACTGTGCCATCCTCCT...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCGTGCTCACACCCTGCTaGTCCAACTCCTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGVLTPC*SNSFFS
Trigger: GGAGAAGAAGGAGTTGGAGCAGCAGGGTGTGAGCAC...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGCAGTTTCTCGGCGGTaGTCACACCCTGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTAVSRR*SHPAAP
Trigger: TGGAGCAGCAGGGTGTGAGCACCGCCGAGAAACTGC...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp AGCAAGTTTGAAGCCAATGGCAGGGTTGGCGTGATGACTGTACTTCCAGGCCAGAGGCGAGGTCGAACTTaGTGCCCTGGCAGTAAATGT +
Preference number: 4 (lower is better)
Translates to: SKFEANGRVGVMTVLPGQRRGRT*CPGSKC
Trigger: ACATTTACTGCCAGGGCAGCAAGTTCGACCTCGCCT...CTGGCCTGGAAGTACAGTCATCACGCCAACCCTGCCATTGGCTTCAAACTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp TTGTTGTATTGCACACAGCGCCGCAGCAGTTCTAAGGCGAGGTCGAACTTGCTGCAGGACTTGTTGTATTaGACACAGCGCCGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: LLYCTQRRSSSKARSNLLQDLLY*TQRRSS
Trigger: ACTGCTGCGGCGCTGTGTGCAATACAACAAGTCCTG...CAGCAAGTTCGACCTCGCCTTAGAACTGCTGCGGCGCTGTGTGCAATACAACAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp TATTGCACACAGCGCCGCAGCAGTTCTAAGGCGAGGTCGAACTTGCTGCCCTGGTTTGTAGTTGGTGACTaGATCCTTGTAGGACTGCTC +
Preference number: 4 (lower is better)
Translates to: YCTQRRSSSKARSNLLPWFVVGD*ILVGLL
Trigger: GAGCAGTCCTACAAGGATGCAGTCACCAACTACAAA...CCAGGGCAGCAAGTTCGACCTCGCCTTAGAACTGCTGCGGCGCTGTGTGCAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp CTTGTCATGGCGGCCTATGAGCCAGAGGAAAAGGCCAGCATAGTACAGTGCAGTGCAGCCTGCTGCACATaGTGGAAGTACTTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LVMAAYEPEEKASIVQCSAACCT*WKYFSW
Trigger: CCAGGAAAAGTACTTCCACCATGTGCAGCAGGCTGC...ACTGCACTGTACTATGCTGGCCTTTTCCTCTGGCTCATAGGCCGCCATGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS-3UTR CCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCGAAGTCACAGTGATCTaGTTCACCACCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGEVTVI*FTTSRA
Trigger: GGCCCTGGAGGTGGTGAACCAGATCACTGTGACTTC...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCACCCCCTTGTGCTTCCTaGACATCAGGAGGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPPPCAS*TSGGLG
Trigger: TCCAAGCCCTCCTGATGTCCAGGAAGCACAAGGGGG...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAAGTGGAGACACGATCTaGCCTGGTAACCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPSGDTI*PGNLGC
Trigger: GCAGCCCAGGTTACCAGGCCAGATCGTGTCTCCACT...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTAGTGGAGACACGATCTaGCCTGGTAACCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: STDPLSIPPHNFSRLMASSGDTI*PGNLGC
Trigger: GCAGCCCAGGTTACCAGGCCAGATCGTGTCTCCACT...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCGGGGTCGATCAGAGCTaGTGCTGCTTTGACTACAGG +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGGVDQS*CCFDYR
Trigger: CCTGTAGTCAAAGCAGCACCAGCTCTGATCGACCCC...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCCAGCTCTAAGCAGTaGAAGCACATGCCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTPSSKQ*KHMPKL
Trigger: CAACTTTGGCATGTGCTTCCACTGCTTAGAGCTGGG...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTAAGATGGATGCCCGCTaGCTAGGCTGCACAGAGGGC +
Preference number: 4 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTKMDAR*LGCTEG
Trigger: GCCCTCTGTGCAGCCTAGCCAGCGGGCATCCATCTT...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp TATTGCACACAGCGCCGCAGCAGTTCTAAGGCGAGGTCGAACTTGCTGCCCTGGTATAGCAGGACTGCTTaGGCAAGATGTTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: YCTQRRSSSKARSNLLPWYSRTA*ARCSLA
Trigger: TGCTAAGGAACATCTTGCCCAAGCAGTCCTGCTATA...CCAGGGCAGCAAGTTCGACCTCGCCTTAGAACTGCTGCGGCGCTGTGTGCAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCAGGGAGGCGTCATGTaGGTTCTGTCTATAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGQGGVM*VLSIGL
Trigger: GAGGCCTATAGACAGAACCCACATGACGCCTCCCTG...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCATTCAGTATCCGAGACTaGAGGTCCAAGGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPFSIRD*RSKALF
Trigger: GAACAAGGCCTTGGACCTCCAGTCTCGGATACTGAA...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCATTCTGGTTGCTCCAGTaGAACTCGCTTCAGTATCCG +
Preference number: 4 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPFWLLQ*NSLQYP
Trigger: CGGATACTGAAGCGAGTTCCACTGGAGCAACCAGAA...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCTTCTGGTTGCTCCAGTaGAACTCGCTTCAGTATCCG +
Preference number: 4 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTFWLLQ*NSLQYP
Trigger: CGGATACTGAAGCGAGTTCCACTGGAGCAACCAGAA...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTCTGGTTGCTCCAGTaGAACTCGCTTCAGTATCCG +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPFWLLQ*NSLQYP
Trigger: CGGATACTGAAGCGAGTTCCACTGGAGCAACCAGAA...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCAGCTGCCAGTTGCTTCTaGGAGGGAATCATTTCTGGT +
Preference number: 4 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPAASCF*EGIISG
Trigger: ACCAGAAATGATTCCCTCCCAGAAGCAACTGGCAGC...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTGTTGATGGCTTCTACTaGTCCAGGCCCCTTGACCCC +
Preference number: 4 (lower is better)
Translates to: STDPLSIPPHNFSRLMASVDGFY*SRPLDP
Trigger: GGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAAC...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp AGCATAGTACAGTGCAGTCCCACTGACTGTCTTGCGTATTTCCTTCAGGCTGTACTGGTGGGTCAGGCCTaGTTGAGCATGGTGGCACTC +
Preference number: 4 (lower is better)
Translates to: SIVQCSPTDCLAYFLQAVLVGQA*LSMVAL
Trigger: GAGTGCCACCATGCTCAACCAGGCCTGACCCACCAG...TACAGCCTGAAGGAAATACGCAAGACAGTCAGTGGGACTGCACTGTACTATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS-3UTR CCA 90 bp GAGGAAAAGGCCAGCATAGTACAGTGCAGTCCCACTGACTGTCTTGCGTATTTCCTTCTCGGTCTCCTTTaGCAGCCCTTGAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: EEKASIVQCSPTDCLAYFLLGLL*QPLRGC
Trigger: ACAGCCCCTCAAGGGCTGCCAAAGGAGACCGAGAAG...GAAATACGCAAGACAGTCAGTGGGACTGCACTGTACTATGCTGGCCTTTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS-3UTR TCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCCTGTACTCAAGCTCCTaGATTGCTTCTCGGTCAATG +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPLYSSS*IASRSM
Trigger: CATTGACCGAGAAGCAATTCAGGAGCTTGAGTACAG...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCTGTACTCAAGCTCCTaGATTGCTTCTCGGTCAATG +
Preference number: 4 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTLYSSS*IASRSM
Trigger: CATTGACCGAGAAGCAATTCAGGAGCTTGAGTACAG...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACAGTGCAGTCCCACTaGCTGTCTTGCGTATTTCCT +
Preference number: 4 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLTVQSH*LSCVFP
Trigger: AGGAAATACGCAAGACAGTCAGTGGGACTGCACTGT...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTCACCTCCAGGGCCTCTaGGTAGTTCTGCTGCATCAT +
Preference number: 4 (lower is better)
Translates to: STDPLSIPPHNFSRLMASHLQGL*VVLLHH
Trigger: ATGATGCAGCAGAACTACTCAGAGGCCCTGGAGGTG...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCTAGAATCACCTGGTaGCTCCCACACAGTCGGCTA +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGPRITW*LPHSRL
Trigger: TAGCCGACTGTGTGGGAGTCACCAGGTGATTCTAGG...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGCAGTTTCATGGCTTCTaGATACCACAGCAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLQFHGF*IPQQGL
Trigger: GAGGCCTTGCTGTGGTATTCAGAAGCCATGAAACTG...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCACCACGTTGGCAATGGTaGTGCGGTTCTCTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPPRWQW*CGSLLV
Trigger: CACCAGAAGAGAACCGCATCACCATTGCCAACGTGG...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCATACCTCTGCAGTAATTaGACCCTGGTTCCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPYLCSN*TLVPKA
Trigger: TGCCTTTGGAACCAGGGTTCAATTACTGCAGAGGTA...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCCCAGTTTGTAGTTGGTaGCTGCATCCTTGTAGGACT +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPPVCSW*LHPCRT
Trigger: AGTCCTACAAGGATGCAGTCACCAACTACAAACTGG...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCAACAACTTCAGTAGGTTaGTGGCTTCTACTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPTTSVG*WLLLVQ
Trigger: CTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGT...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCACAACTTCAGTAGGTTaGTGGCTTCTACTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTTTSVG*WLLLVQ
Trigger: CTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGT...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp TTTGGCCTTGTCATGGCGGCCTATGAGCCAGAGGAAAAGGCCAGCATAGTACAGCTGTACTCAAGCTCCTaGATTGCTTCTCGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: FGLVMAAYEPEEKASIVQLYSSS*IASRSP
Trigger: AGGAGACCGAGAAGCAATTCAGGAGCTTGAGTACAG...CTGTACTATGCTGGCCTTTTCCTCTGGCTCATAGGCCGCCATGACAAGGCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS-3UTR GCA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTCCCACAGCTGCAGCCTaGTGCACATGGTGGAAGTAC +
Preference number: 4 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTPTAAA*CTWWKY
Trigger: GTACTTCCACCATGTGCAGCAGGCTGCAGCTGTGGG...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGTTCCCAAGGGACTTCTaGACCTCCTTCAGGAATTCC +
Preference number: 4 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLFPRDF*TSFRNS
Trigger: GGAATTCCTGAAGGAGGTGCAGAAGTCCCTTGGGAA...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGAAGTGAAGCTCCACTaGCTCCTTCAGGAGCGCTGT +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPEVKLH*LLQERC
Trigger: ACAGCGCTCCTGAAGGAGGCAGTGGAGCTTCACTTC...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTGGCAACGCTGCAGGATaGTCTGGGCATTCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: STDPLSIPPHNFSRLMASGNAAG*SGHSLA
Trigger: AGCTAGAGAATGCCCAGAGCATCCTGCAGCGTTGCC...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTCGTCCACATTGCCCTTaGTCAGGACCAAGTCCACGT +
Preference number: 4 (lower is better)
Translates to: STDPLSIPPHNFSRLMASRPHCP*SGPSPR
Trigger: ACGTGGACTTGGTCCTGAGCAAGGGCAATGTGGACG...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCACGTCCACATTGCCCTTaGTCAGGACCAAGTCCACGT +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPRPHCP*SGPSPR
Trigger: ACGTGGACTTGGTCCTGAGCAAGGGCAATGTGGACG...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCTCTCGGGCTCCAGAATaGTCATTAAGGCATCGCCCA +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGSRAPE*SLRHRP
Trigger: TGGGCGATGCCTTAATGAGCATTCTGGAGCCCGAGA...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTAAGCGTGCCCAATTCTaGTGGCCAGGGAGGCGTCAT +
Preference number: 4 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTKRAQF*WPGRRH
Trigger: ATGACGCCTCCCTGGCCAGCAGAATTGGGCACGCTT...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACTTCAGGAGCAGTTTaGCCAGATCGCAGCACAGAA +
Preference number: 4 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLTSGAV*PDRSTE
Trigger: TTCTGTGCTGCGATCTGGGCAAACTGCTCCTGAAGT...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCATGGTTCTGCTCAGTCTaGAGGAGGATGGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPWFCSV*RRMAQC
Trigger: GCACTGTGCCATCCTCCTGCAGACTGAGCAGAACCA...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp AAGTTTGAAGCCAATGGCAGGGTTGGCGTGATGACTGTACTTCCAGGCCAGTTTGCGGTCTCATGGTTCTaGTCAGTCTGCAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: KFEANGRVGVMTVLPGQFAVSWF*SVCRRM
Trigger: CATCCTCCTGCAGACTGAGCAGAACCATGAGACCGC...AAACTGGCCTGGAAGTACAGTCATCACGCCAACCCTGCCATTGGCTTCAAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTGCGGTCTCATGGTTCTaGTCAGTCTGCAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: STDPLSIPPHNFSRLMASAVSWF*SVCRRM
Trigger: CATCCTCCTGCAGACTGAGCAGAACCATGAGACCGC...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCGCAGCCTGCTGCACATaGTGGAAGTACTTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGAACCT*WKYFSW
Trigger: CCAGGAAAAGTACTTCCACCATGTGCAGCAGGCTGC...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp GAGGAAAAGGCCAGCATAGTACAGTGCAGTCCCACTGACTGTCTTGCGTATTTCGCACAGGGACACGTCTaGGTGATGCCTGATGCTTTC +
Preference number: 4 (lower is better)
Translates to: EEKASIVQCSPTDCLAYFAQGHV*VMPDAF
Trigger: GAAAGCATCAGGCATCACCCAGACGTGTCCCTGTGC...GAAATACGCAAGACAGTCAGTGGGACTGCACTGTACTATGCTGGCCTTTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS-3UTR CCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTGCACAGGGACACGTCTaGGTGATGCCTGATGCTTTC +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGAQGHV*VMPDAF
Trigger: GAAAGCATCAGGCATCACCCAGACGTGTCCCTGTGC...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTTCTTTGGCCTTGTCATaGCGGCCTATGAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGSLALS*RPMSQR
Trigger: CCTCTGGCTCATAGGCCGCCATGACAAGGCCAAAGA...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp GAAGCCCATGTACTCATAGGCCTTGTAGCAGGACTTGTTGTATTGCACACAGCGGCTTTCTTCGCAGTGTaGGGCTTGTCTGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: EAHVLIGLVAGLVVLHTAAFFAV*GLSEVR
Trigger: CCTGACCTCAGACAAGCCCCACACTGCGAAGAAAGC...CGCTGTGTGCAATACAACAAGTCCTGCTACAAGGCCTATGAGTACATGGGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTGCTTTCTTCGCAGTGTaGGGCTTGTCTGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGAFFAV*GLSEVR
Trigger: CCTGACCTCAGACAAGCCCCACACTGCGAAGAAAGC...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431162.6
CDS-3UTR CCA 90 bp TGTTGTATTGCACACAGCGCCGCAGCAGTTCTAAGGCGAGGTCGAACTTGCTGCGCCCCAGCACATCTTTaGTGTCCTGAATTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: CCIAHSAAAVLRRGRTCCAPAHL*CPEFLV
Trigger: AACAAGGAATTCAGGACACCAAAGATGTGCTGGGGC...GCAGCAAGTTCGACCTCGCCTTAGAACTGCTGCGGCGCTGTGTGCAATACAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTGAAGTCACAGTGATCTaGTTCACCACCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGEVTVI*FTTSRA
Trigger: GGCCCTGGAGGTGGTGAACCAGATCACTGTGACTTC...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp GTGATGACTGTACTTCCAGGCCAGTTTGTAGTTGGTGACTGCATCCTTGTAGGACCCCCTTGTGCTTCCTaGACATCAGGAGGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: VMTVLPGQFVVGDCILVGPPCAS*TSGGLG
Trigger: TCCAAGCCCTCCTGATGTCCAGGAAGCACAAGGGGG...TCCTACAAGGATGCAGTCACCAACTACAAACTGGCCTGGAAGTACAGTCATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCAGACTTGTTTAAGAAGTaGAGACACGATCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPDLFKK*RHDLAW
Trigger: CCAGGCCAGATCGTGTCTCCACTTCTTAAACAAGTC...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCACGTCTTTATGGCCTCTaGATAGTCTCCAGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPRLYGL*IVSSLV
Trigger: AACAAGGCTGGAGACTATCCAGAGGCCATAAAGACG...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCGTCTTTATGGCCTCTaGATAGTCTCCAGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTRLYGL*IVSSLV
Trigger: AACAAGGCTGGAGACTATCCAGAGGCCATAAAGACG...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTGGCCATCTTCTCTCTaGCTTCCATATAGCAGGACT +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPWPSSL*LPYSRT
Trigger: AGTCCTGCTATATGGAAGCCAGAGAGAAGATGGCCA...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCTCTGCAGGTAGATGTTaGCCATCTTCTCTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTSAGRC*PSSLWL
Trigger: AAGCCAGAGAGAAGATGGCCAACATCTACCTGCAGA...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp GAAGCCCATGTACTCATAGGCCTTGTAGCAGGACTTGTTGTATTGCACACAGCGCAGTCTGCAGGAGGATaGCACAGTGCTGCTCACACA +
Preference number: 4 (lower is better)
Translates to: EAHVLIGLVAGLVVLHTAQSAGG*HSAAHT
Trigger: TGTGTGAGCAGCACTGTGCCATCCTCCTGCAGACTG...CGCTGTGTGCAATACAACAAGTCCTGCTACAAGGCCTATGAGTACATGGGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTCAGTCTGCAGGAGGATaGCACAGTGCTGCTCACACA +
Preference number: 4 (lower is better)
Translates to: STDPLSIPPHNFSRLMASQSAGG*HSAAHT
Trigger: TGTGTGAGCAGCACTGTGCCATCCTCCTGCAGACTG...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCGCAGTAATTGAACCCTaGTTCCAAAGGCACCCGGCT +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGAVIEP*FQRHPA
Trigger: AGCCGGGTGCCTTTGGAACCAGGGTTCAATTACTGC...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCACAACCTCGTTGTCTaGATTCAGACAGATCTGCAC +
Preference number: 4 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTHNLVV*IQTDLH
Trigger: GTGCAGATCTGTCTGAATCCAGACAACGAGGTTGTG...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp AGGGTTGGCGTGATGACTGTACTTCCAGGCCAGTTTGTAGTTGGTGACTGCATCTTGCTCTCAGCTCCCTaGTTCTCAAAAGCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: RVGVMTVLPGQFVVGDCILLSAP*FSKASP
Trigger: CGGAGAGGCTTTTGAGAACCAGGGAGCTGAGAGCAA...GATGCAGTCACCAACTACAAACTGGCCTGGAAGTACAGTCATCACGCCAACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTTCAGCCTGCGCTATCTaGATGAAGCTGCCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTSACAI*MKLPSA
Trigger: TGCGCTGGGCAGCTTCATCCAGATAGCGCAGGCTGA...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp GCCAGCATAGTACAGTGCAGTCCCACTGACTGTCTTGCGTATTTCCTTCAGGCTACACAGGGTCATTGCTaGATTTTTCCAGGCCCACAG +
Preference number: 4 (lower is better)
Translates to: ASIVQCSPTDCLAYFLQATQGHC*IFPGPQ
Trigger: CTGTGGGCCTGGAAAAATTCAGCAATGACCCTGTGT...AGCCTGAAGGAAATACGCAAGACAGTCAGTGGGACTGCACTGTACTATGCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS-3UTR TCA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCAACATCTTTGGTGTCCTaGATTCCTTGTTCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPTSLVS*IPCSRY
Trigger: GTACCTGGAACAAGGAATTCAGGACACCAAAGATGT...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430597.6
ENST00000431162.6
CDS-3UTR TCA 90 bp CTGTGGTCATGTTTCCTTCTCTTGCAAGCTCATGCACGGTTAGAATTTGGCAGGCACCTCCAGGGCCTCTaGGTAGTTCTGCTGCATCAT +
Preference number: 4 (lower is better)
Translates to: LWSCFLLLQAHARLEFGRHLQGL*VVLLHH
Trigger: ATGATGCAGCAGAACTACTCAGAGGCCCTGGAGGTG...CCTGCCAAATTCTAACCGTGCATGAGCTTGCAAGAGAAGGAAACATGACCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431559.5
CDS-3UTR TCA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTCACCTCCAGGGCCTCTaGGTAGTTCTGCTGCATCAT +
Preference number: 4 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTHLQGL*VVLLHH
Trigger: ATGATGCAGCAGAACTACTCAGAGGCCCTGGAGGTG...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCATCCCTGAAGTCACAGTaGTCTGGTTCACCACCTCCA +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPSLKSQ*SGSPPP
Trigger: TGGAGGTGGTGAACCAGATCACTGTGACTTCAGGGA...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTTCCCTGAAGTCACAGTaGTCTGGTTCACCACCTCCA +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGSLKSQ*SGSPPP
Trigger: TGGAGGTGGTGAACCAGATCACTGTGACTTCAGGGA...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTTGGCAGGAAGCTCCCTaGAGTCACAGTGATCTGGTT +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGWQEAP*SHSDLV
Trigger: AACCAGATCACTGTGACTTCAGGGAGCTTCCTGCCA...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCAGATATGACACAAGATaGTCCCTGTCAAACCAGCCA +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPRYDTR*SLSNQP
Trigger: TGGCTGGTTTGACAGGGATCATCTTGTGTCATATCT...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCGCTCTGAGTAATACCTaGCCTGAGCCATCAAATACA +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPALSNT*PEPSNT
Trigger: TGTATTTGATGGCTCAGGTCAGGTATTACTCAGAGC...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431162.6
CDS-3UTR TCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAAGTAGATCTGACACATaGGGAGATGGGCATCCACGG +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPSRSDT*GDGHPR
Trigger: CCGTGGATGCCCATCTCCTCATGTGTCAGATCTACT...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGCTGCACAGAGGGCCTaGGGAACTTTCTGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTAAQRA*GTFCLL
Trigger: AAGAAGGCAGAAAGTTCCTCAGGCCCTCTGTGCAGC...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCACTTGGTGGTAAAGATTaGTGGCCGCTTCATGTTTCT +
Preference number: 4 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPLGGKD*WPLHVS
Trigger: AGAAACATGAAGCGGCCATCAATCTTTACCACCAAG...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCCTTGGTGGTAAAGATTaGTGGCCGCTTCATGTTTCT +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPLGGKD*WPLHVS
Trigger: AGAAACATGAAGCGGCCATCAATCTTTACCACCAAG...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGATGGCATCCTGGATGTaGTCTTCTTTGAGGACTCCA +
Preference number: 4 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLMASWM*SSLRTP
Trigger: TGGAGTCCTCAAAGAAGAGCACATCCAGGATGCCAT...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTCGAGCTAAGAACAGCTaGATCTTCAGGACGAGGGCT +
Preference number: 4 (lower is better)
Translates to: STDPLSIPPHNFSRLMASRAKNS*IFRTRA
Trigger: AGCCCTCGTCCTGAAGATGCAGCTGTTCTTAGCTCG...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp TCGGGGTGCTCCCTGAGGACATCGTTGCAGATTTCAATGGCCTCCACAAATTTCTTCCCAAGGGACTTCTaGACCTCCTTCAGGAATTCC +
Preference number: 4 (lower is better)
Translates to: SGCSLRTSLQISMASTNFFPRDF*TSFRNS
Trigger: GGAATTCCTGAAGGAGGTGCAGAAGTCCCTTGGGAA...GAAATTTGTGGAGGCCATTGAAATCTGCAACGATGTCCTCAGGGAGCACCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGAAGTGAAGCTCCACTaGCTCCTTCAGGAGCGCTGT +
Preference number: 4 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTEVKLH*LLQERC
Trigger: ACAGCGCTCCTGAAGGAGGCAGTGGAGCTTCACTTC...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTGAGGGATGCCTTGCATaGTGGAGAAGTGAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGEGCLA*WRSEAP
Trigger: TGGAGCTTCACTTCTCCAGCATGCAAGGCATCCCTC...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCAGAGCCAAGAGGGATaGCTTGCATGCTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGQSQEG*LACWRS
Trigger: ACTTCTCCAGCATGCAAGGCATCCCTCTTGGCTCTG...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCAGATCAGAGCTGGTGCTaGTTTGACTACAGGATTCAA +
Preference number: 4 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPDQSWC*FDYRIQ
Trigger: TTGAATCCTGTAGTCAAAGCAGCACCAGCTCTGATC...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAAGCAGTGGAAGCACATaGCAAAGTTGCCCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPSSGST*QSCPEP
Trigger: TGGCTCAGGGCAACTTTGGCATGTGCTTCCACTGCT...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCTCATTGATGGTGTCCTaGATGACCTTGGTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGSLMVS*MTLVAS
Trigger: TGAGGCCACCAAGGTCATGCAGGACACCATCAATGA...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp GATGAAGCCCATGTACTCATAGGCCTTGTAGCAGGACTTGTTGTATTGCACACAGCGCCACGTCCACATTaGCCTTGCTCAGGACCAAGT +
Preference number: 4 (lower is better)
Translates to: DEAHVLIGLVAGLVVLHTAPRPH*PCSGPS
Trigger: ACTTGGTCCTGAGCAAGGGCAATGTGGACGTGGCGC...TGTGTGCAATACAACAAGTCCTGCTACAAGGCCTATGAGTACATGGGCTTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp GAAGCCCATGTACTCATAGGCCTTGTAGCAGGACTTGTTGTATTGCACACAGCGTCTCGGGCTCCAGAATaGTCATTAAGGCATCGCCCA +
Preference number: 4 (lower is better)
Translates to: EAHVLIGLVAGLVVLHTASRAPE*SLRHRP
Trigger: TGGGCGATGCCTTAATGAGCATTCTGGAGCCCGAGA...CGCTGTGTGCAATACAACAAGTCCTGCTACAAGGCCTATGAGTACATGGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCGCTCTTGTAAACCTTTaGCAGCAAAAGCAGGCACTT +
Preference number: 4 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTALVNL*QQKQAL
Trigger: AAGTGCCTGCTTTTGCTGGCAAAGGTTTACAAGAGC...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp AGCAAGTTTGAAGCCAATGGCAGGGTTGGCGTGATGACTGTACTTCCAGGCCAGGGAATCATTTCTGGTTaGTCCAGTGGAACTCGCTTC +
Preference number: 4 (lower is better)
Translates to: SKFEANGRVGVMTVLPGQGIISG*SSGTRF
Trigger: GAAGCGAGTTCCACTGGAGCAACCAGAAATGATTCC...CTGGCCTGGAAGTACAGTCATCACGCCAACCCTGCCATTGGCTTCAAACTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGGGAATCATTTCTGGTTaGTCCAGTGGAACTCGCTTC +
Preference number: 4 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLGIISG*SSGTRF
Trigger: GAAGCGAGTTCCACTGGAGCAACCAGAAATGATTCC...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTCCCAAGTGCTGTCCTTaGGTGCCTTGTTCAGGAACT +
Preference number: 4 (lower is better)
Translates to: STDPLSIPPHNFSRLMASPKCCP*VPCSGT
Trigger: AGTTCCTGAACAAGGCACGCAAGGACAGCACTTGGG...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCACGAGGTCGAACTTGCTaGCCTGGCAGTAAATGTCAG +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPRGRTC*PGSKCQ
Trigger: CTGACATTTACTGCCAGGGCAGCAAGTTCGACCTCG...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAAGGCGAGGTCGAACTTaGTGCCCTGGCAGTAAATGT +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPRRGRT*CPGSKC
Trigger: ACATTTACTGCCAGGGCAGCAAGTTCGACCTCGCCT...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTAGGCGAGGTCGAACTTaGTGCCCTGGCAGTAAATGT +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGRRGRT*CPGSKC
Trigger: ACATTTACTGCCAGGGCAGCAAGTTCGACCTCGCCT...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCAGGACTTGTTGTATTaGACACAGCGCCGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGQDLLY*TQRRSS
Trigger: ACTGCTGCGGCGCTGTGTGCAATACAACAAGTCCTG...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCTTTGTAGTTGGTGACTaGATCCTTGTAGGACTGCTC +
Preference number: 4 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTFVVGD*ILVGLL
Trigger: GAGCAGTCCTACAAGGATGCAGTCACCAACTACAAA...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTGCAGCCTGCTGCACATaGTGGAAGTACTTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: STDPLSIPPHNFSRLMASAACCT*WKYFSW
Trigger: CCAGGAAAAGTACTTCCACCATGTGCAGCAGGCTGC...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp GTGCTCCCTGAGGACATCGTTGCAGATTTCAATGGCCTCCACAAATTTCTTGTCGCACAGGGACACGTCTaGGTGATGCCTGATGCTTTC +
Preference number: 4 (lower is better)
Translates to: VLPEDIVADFNGLHKFLVAQGHV*VMPDAF
Trigger: GAAAGCATCAGGCATCACCCAGACGTGTCCCTGTGC...GACAAGAAATTTGTGGAGGCCATTGAAATCTGCAACGATGTCCTCAGGGAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGCACAGGGACACGTCTaGGTGATGCCTGATGCTTTC +
Preference number: 4 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTAQGHV*VMPDAF
Trigger: GAAAGCATCAGGCATCACCCAGACGTGTCCCTGTGC...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp GATGAAGCCCATGTACTCATAGGCCTTGTAGCAGGACTTGTTGTATTGCACACATCTGGCCTGGTAACCTaGGCTGCTTGGGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: DEAHVLIGLVAGLVVLHTSGLVT*AAWGRR
Trigger: TCTTCTGCCCCAAGCAGCCCAGGTTACCAGGCCAGA...TGTGTGCAATACAACAAGTCCTGCTACAAGGCCTATGAGTACATGGGCTTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTCGCTGCAGGATGCTCTaGGCATTCTCTAGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTRCRML*AFSSSE
Trigger: CTCAGAGCTAGAGAATGCCCAGAGCATCCTGCAGCG...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431162.6
CDS-3UTR CCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCAGCTCTAAGCAGTaGAAGCACATGCCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGPSSKQ*KHMPKL
Trigger: CAACTTTGGCATGTGCTTCCACTGCTTAGAGCTGGG...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCTTTTCAGCGTCTTTATaGCCTCTGGATAGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTFSASL*PLDSLQ
Trigger: CTGGAGACTATCCAGAGGCCATAAAGACGCTGAAAA...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGTGGCCATCTTCTCTCTaGCTTCCATATAGCAGGACT +
Preference number: 4 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLWPSSL*LPYSRT
Trigger: AGTCCTGCTATATGGAAGCCAGAGAGAAGATGGCCA...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGTCTGCAGGTAGATGTTaGCCATCTTCTCTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLSAGRC*PSSLWL
Trigger: AAGCCAGAGAGAAGATGGCCAACATCTACCTGCAGA...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp AGGGTTGGCGTGATGACTGTACTTCCAGGCCAGTTTGTAGTTGGTGACTGCATCGGAGGGAATCATTTCTaGTTGCTCCAGTGGAACTCG +
Preference number: 4 (lower is better)
Translates to: RVGVMTVLPGQFVVGDCIGGNHF*LLQWNS
Trigger: CGAGTTCCACTGGAGCAACCAGAAATGATTCCCTCC...GATGCAGTCACCAACTACAAACTGGCCTGGAAGTACAGTCATCACGCCAACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAACTTTAAGGCTTCGTTaGGCTGCCCTATGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPTLRLR*AALCAS
Trigger: GCTGGCACATAGGGCAGCCCAACGAAGCCTTAAAGT...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTTTGCTCTCAGCTCCCTaGTTCTCAAAAGCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: STDPLSIPPHNFSRLMASLLSAP*FSKASP
Trigger: CGGAGAGGCTTTTGAGAACCAGGGAGCTGAGAGCAA...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp GTTGGCGTGATGACTGTACTTCCAGGCCAGTTTGTAGTTGGTGACTGCATCCTTACTGCATACGCGCCTTaGGGATCTGCTTCAGGAACA +
Preference number: 4 (lower is better)
Translates to: VGVMTVLPGQFVVGDCILTAYAP*GSASGT
Trigger: TGTTCCTGAAGCAGATCCCCAAGGCGCGTATGCAGT...AAGGATGCAGTCACCAACTACAAACTGGCCTGGAAGTACAGTCATCACGCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAAGCCAATGGCAGGGTTaGCGTGATGACTGTACTTCC +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPSQWQG*RDDCTS
Trigger: GGAAGTACAGTCATCACGCCAACCCTGCCATTGGCT...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTAGCCAATGGCAGGGTTaGCGTGATGACTGTACTTCC +
Preference number: 4 (lower is better)
Translates to: STDPLSIPPHNFSRLMASSQWQG*RDDCTS
Trigger: GGAAGTACAGTCATCACGCCAACCCTGCCATTGGCT...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp GATGAAGCCCATGTACTCATAGGCCTTGTAGCAGGACTTGTTGTATTGCACACAGTTGATGGCTTCTACTaGTCCAGGCCCCTTGACCCC +
Preference number: 4 (lower is better)
Translates to: DEAHVLIGLVAGLVVLHTVDGFY*SRPLDP
Trigger: GGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAAC...TGTGTGCAATACAACAAGTCCTGCTACAAGGCCTATGAGTACATGGGCTTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430597.6
3UTR CAA 72 bp GAAATCTTCAGCATGCGGTCAATGTACTCTTTGGCCTaGTCATGGCGGCCTATGAGCCAGAGGAAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: EIFSMRSMYSLA*SWRPMSQRKRP
Trigger: TGGCCTTTTCCTCTGGCTCATAGGCCGCCATGACAAGGCCAAAGAGTACATTGACCGCATGCTGAAGATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS-3UTR TCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTACACAGGGTCATTGCTaGATTTTTCCAGGCCCACAG +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGTQGHC*IFPGPQ
Trigger: CTGTGGGCCTGGAAAAATTCAGCAATGACCCTGTGT...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp GAGGAAAAGGCCAGCATAGTACAGTGCAGTCCCACTGACTGTCTTGCGTATTTCACAGTGCAGTCCCACTaGCTGTCTTGCGTATTTCCT +
Preference number: 4 (lower is better)
Translates to: EEKASIVQCSPTDCLAYFTVQSH*LSCVFP
Trigger: AGGAAATACGCAAGACAGTCAGTGGGACTGCACTGT...GAAATACGCAAGACAGTCAGTGGGACTGCACTGTACTATGCTGGCCTTTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS-3UTR TCA 90 bp AAGTTTGAAGCCAATGGCAGGGTTGGCGTGATGACTGTACTTCCAGGCCAGTTTACAGTGCAGTCCCACTaGCTGTCTTGCGTATTTCCT +
Preference number: 4 (lower is better)
Translates to: KFEANGRVGVMTVLPGQFTVQSH*LSCVFP
Trigger: AGGAAATACGCAAGACAGTCAGTGGGACTGCACTGT...AAACTGGCCTGGAAGTACAGTCATCACGCCAACCCTGCCATTGGCTTCAAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR TCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAACAGTGCAGTCCCACTaGCTGTCTTGCGTATTTCCT +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPTVQSH*LSCVFP
Trigger: AGGAAATACGCAAGACAGTCAGTGGGACTGCACTGT...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCACAGTTTCATGGCTTCTaGATACCACAGCAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPQFHGF*IPQQGL
Trigger: GAGGCCTTGCTGTGGTATTCAGAAGCCATGAAACTG...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp TTGTTGTATTGCACACAGCGCCGCAGCAGTTCTAAGGCGAGGTCGAACTTGCTGAGATATGACACAAGATaGTCCCTGTCAAACCAGCCA +
Preference number: 4 (lower is better)
Translates to: LLYCTQRRSSSKARSNLLRYDTR*SLSNQP
Trigger: TGGCTGGTTTGACAGGGATCATCTTGTGTCATATCT...CAGCAAGTTCGACCTCGCCTTAGAACTGCTGCGGCGCTGTGTGCAATACAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR TCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCGAGCTGGTGCTGCTTTaGCTACAGGATTCAAGATCA +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGELVLL*LQDSRS
Trigger: TGATCTTGAATCCTGTAGTCAAAGCAGCACCAGCTC...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp AGGGTTGGCGTGATGACTGTACTTCCAGGCCAGTTTGTAGTTGGTGACTGCATCCCAGTTTGTAGTTGGTaGCTGCATCCTTGTAGGACT +
Preference number: 4 (lower is better)
Translates to: RVGVMTVLPGQFVVGDCIPVCSW*LHPCRT
Trigger: AGTCCTACAAGGATGCAGTCACCAACTACAAACTGG...GATGCAGTCACCAACTACAAACTGGCCTGGAAGTACAGTCATCACGCCAACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR TCA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCATCAGATTTCTAACGTaGTTGGTAGCTGTGGTCATG +
Preference number: 4 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTIRFLT*LVAVVM
Trigger: CATGACCACAGCTACCAATCACGTTAGAAATCTGAT...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430597.6
ENST00000440121.1
CDS-3UTR TCA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGCTCCTGAGTAATACCTaGCCTGAGCCATCAAATACA +
Preference number: 4 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLLLSNT*PEPSNT
Trigger: TGTATTTGATGGCTCAGGTCAGGTATTACTCAGGAG...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430597.6
ENST00000440121.1
CDS-3UTR GCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTACAGCTGCAGCCTGCTaGACATGGTGGAAGTACTTT +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGTAAAC*TWWKYF
Trigger: AAAGTACTTCCACCATGTGCAGCAGGCTGCAGCTGT...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp TTGGTAGCTGTGGTCATGTTTCCTTCTCTTGCAAGCTCATGCACGGTTAGAATTCCCACAGCTGCAGCCTaGTGCACATGGTGGAAGTAC +
Preference number: 4 (lower is better)
Translates to: LVAVVMFPSLASSCTVRIPTAAA*CTWWKY
Trigger: GTACTTCCACCATGTGCAGCAGGCTGCAGCTGTGGG...AATTCTAACCGTGCATGAGCTTGCAAGAGAAGGAAACATGACCACAGCTACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431559.5
CDS-3UTR GCA 90 bp TTTCCTTCTCTTGCAAGCTCATGCACGGTTAGAATTTGGCAGGCATCAATATTGTTCCAGGCCCACAGCTaGAGCCTGCTGCACATGGTG +
Preference number: 4 (lower is better)
Translates to: FPSLASSCTVRIWQASILFQAHS*SLLHMV
Trigger: CACCATGTGCAGCAGGCTGCAGCTGTGGGCCTGGAA...CAATATTGATGCCTGCCAAATTCTAACCGTGCATGAGCTTGCAAGAGAAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431559.5
CDS-3UTR GCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCCTCAAGCTCCTGAATTaGTTCTCGGTCAATGATTTC +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPLKLLN*FSVNDF
Trigger: GAAATCATTGACCGAGAAGCAATTCAGGAGCTTGAG...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGCCAGCATAGTACAGTaGAGTCCCACTGACTGTCTT +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPASIVQ*SPTDCL
Trigger: AAGACAGTCAGTGGGACTGCACTGTACTATGCTGGC...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp TCATGTTTCCTTCTCTTGCAAGCTCATGCACGGTTAGAATTTGGCAGGCATCAAGTCTGCTCCCAGTCCTaGCGAGCTAAGAACAGCTGC +
Preference number: 4 (lower is better)
Translates to: SCFLLLQAHARLEFGRHQVCSQS*RAKNSC
Trigger: GCAGCTGTTCTTAGCTCGGCAGGACTGGGAGCAGAC...TTGATGCCTGCCAAATTCTAACCGTGCATGAGCTTGCAAGAGAAGGAAACATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431559.5
CDS-3UTR GCA 90 bp CTGAGGACATCGTTGCAGATTTCAATGGCCTCCACAAATTTCTTGTCCTTCAGGGAAGTGAAGCTCCACTaGCTCCTTCAGGAGCGCTGT +
Preference number: 4 (lower is better)
Translates to: LRTSLQISMASTNFLSFREVKLH*LLQERC
Trigger: ACAGCGCTCCTGAAGGAGGCAGTGGAGCTTCACTTC...CCTGAAGGACAAGAAATTTGTGGAGGCCATTGAAATCTGCAACGATGTCCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGAGGGATGCCTTGCATaGTGGAGAAGTGAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTEGCLA*WRSEAP
Trigger: TGGAGCTTCACTTCTCCAGCATGCAAGGCATCCCTC...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTCAGAGCCAAGAGGGATaGCTTGCATGCTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTQSQEG*LACWRS
Trigger: ACTTCTCCAGCATGCAAGGCATCCCTCTTGGCTCTG...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCGTCGATCAGAGCTGGTaGTGCTTTGACTACAGGATT +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGVDQSW*CFDYRI
Trigger: AATCCTGTAGTCAAAGCAGCACCAGCTCTGATCGAC...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp AGGGTTGGCGTGATGACTGTACTTCCAGGCCAGTTTGTAGTTGGTGACTGCATCAGCACATGCCAAAGTTaGCCTGAGCCAAGTAGATCT +
Preference number: 4 (lower is better)
Translates to: RVGVMTVLPGQFVVGDCISTCQS*PEPSRS
Trigger: AGATCTACTTGGCTCAGGGCAACTTTGGCATGTGCT...GATGCAGTCACCAACTACAAACTGGCCTGGAAGTACAGTCATCACGCCAACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp AAGTTTGAAGCCAATGGCAGGGTTGGCGTGATGACTGTACTTCCAGGCCAGTTTTCATTGATGGTGTCCTaGATGACCTTGGTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: KFEANGRVGVMTVLPGQFSLMVS*MTLVAS
Trigger: TGAGGCCACCAAGGTCATGCAGGACACCATCAATGA...AAACTGGCCTGGAAGTACAGTCATCACGCCAACCCTGCCATTGGCTTCAAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCATCATTGATGGTGTCCTaGATGACCTTGGTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPSLMVS*MTLVAS
Trigger: TGAGGCCACCAAGGTCATGCAGGACACCATCAATGA...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTTCAGGAGCAGTTTaGCCAGATCGCAGCACAGAA +
Preference number: 4 (lower is better)
Translates to: STDPLSIPPHNFSRLMASTSGAV*PDRSTE
Trigger: TTCTGTGCTGCGATCTGGGCAAACTGCTCCTGAAGT...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCGGAATCATTTCTGGTTaGTCCAGTGGAACTCGCTTC +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGGIISG*SSGTRF
Trigger: GAAGCGAGTTCCACTGGAGCAACCAGAAATGATTCC...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp AGGGTTGGCGTGATGACTGTACTTCCAGGCCAGTTTGTAGTTGGTGACTGCATCATAGAGGCTGCCAGTTaGTTCTGGGAGGGAATCATT +
Preference number: 4 (lower is better)
Translates to: RVGVMTVLPGQFVVGDCIIEAAS*FWEGII
Trigger: AATGATTCCCTCCCAGAAGCAACTGGCAGCCTCTAT...GATGCAGTCACCAACTACAAACTGGCCTGGAAGTACAGTCATCACGCCAACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGGTCATACTCTTTCTCTaGCAGGTAGTGCTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLVILFL*QVVLCK
Trigger: TTTGCAGAGCACTACCTGGCAGAGAAAGAGTATGAC...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCTCTTCTCCATGTAGTTaGTCTCAGCTCCCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGSSPCS*SQLPGS
Trigger: AGAACCAGGGAGCTGAGAGCAACTACATGGAGAAGA...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp GTTGCAGATTTCAATGGCCTCCACAAATTTCTTGTCCTTCAGGTAGTTGAAAGCGCCAGGCGCTTCAACTaGATACGCGCCTTGGGGATC +
Preference number: 4 (lower is better)
Translates to: VADFNGLHKFLVLQVVESARRFN*IRALGI
Trigger: GATCCCCAAGGCGCGTATGCAGTTGAAGCGCCTGGC...GCTTTCAACTACCTGAAGGACAAGAAATTTGTGGAGGCCATTGAAATCTGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGCCTGCTGCACATGGTaGAAGTACTTTTCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPACCTW*KYFSWL
Trigger: TAGCCAGGAAAAGTACTTCCACCATGTGCAGCAGGC...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTGCCTGCTGCACATGGTaGAAGTACTTTTCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: STDPLSIPPHNFSRLMASACCTW*KYFSWL
Trigger: TAGCCAGGAAAAGTACTTCCACCATGTGCAGCAGGC...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGTCAATGTACTCTTTaGCCTTGTCATGGCGGCCTA +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPGQCTL*PCHGGL
Trigger: TAGGCCGCCATGACAAGGCCAAAGAGTACATTGACC...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTGGTCAATGTACTCTTTaGCCTTGTCATGGCGGCCTA +
Preference number: 4 (lower is better)
Translates to: STDPLSIPPHNFSRLMASGQCTL*PCHGGL
Trigger: TAGGCCGCCATGACAAGGCCAAAGAGTACATTGACC...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTGCACGGTTAGAATTTaGCAGGCATCAATATTGCTC +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPCTVRI*QASILL
Trigger: GAGCAATATTGATGCCTGCCAAATTCTAACCGTGCA...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCATGCACGGTTAGAATTTaGCAGGCATCAATATTGCTC +
Preference number: 4 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPCTVRI*QASILL
Trigger: GAGCAATATTGATGCCTGCCAAATTCTAACCGTGCA...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGATAGCCCAGTTCTGTaGCCACATGGACATACGAGG +
Preference number: 4 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTDSPVL*PHGHTR
Trigger: CCTCGTATGTCCATGTGGCCACAGAACTGGGCTATC...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp AGGGTTGGCGTGATGACTGTACTTCCAGGCCAGTTTGTAGTTGGTGACTGCATCGACATCAGGAGGGCTTaGAGGAAAATTAGCACCTCA +
Preference number: 4 (lower is better)
Translates to: RVGVMTVLPGQFVVGDCIDIRRA*RKISTS
Trigger: TGAGGTGCTAATTTTCCTCCAAGCCCTCCTGATGTC...GATGCAGTCACCAACTACAAACTGGCCTGGAAGTACAGTCATCACGCCAACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp AAGTTTGAAGCCAATGGCAGGGTTGGCGTGATGACTGTACTTCCAGGCCAGTTTCCCAGCTCTAAGCAGTaGAAGCACATGCCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: KFEANGRVGVMTVLPGQFPSSKQ*KHMPKL
Trigger: CAACTTTGGCATGTGCTTCCACTGCTTAGAGCTGGG...AAACTGGCCTGGAAGTACAGTCATCACGCCAACCCTGCCATTGGCTTCAAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGTTTTCAGCGTCTTTATaGCCTCTGGATAGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLFSASL*PLDSLQ
Trigger: CTGGAGACTATCCAGAGGCCATAAAGACGCTGAAAA...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCTCTGCAGGTAGATGTTaGCCATCTTCTCTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGSAGRC*PSSLWL
Trigger: AAGCCAGAGAGAAGATGGCCAACATCTACCTGCAGA...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp GATGAAGCCCATGTACTCATAGGCCTTGTAGCAGGACTTGTTGTATTGCACACACAGGGAGGCGTCATGTaGGTTCTGTCTATAGGCCTC +
Preference number: 4 (lower is better)
Translates to: DEAHVLIGLVAGLVVLHTQGGVM*VLSIGL
Trigger: GAGGCCTATAGACAGAACCCACATGACGCCTCCCTG...TGTGTGCAATACAACAAGTCCTGCTACAAGGCCTATGAGTACATGGGCTTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCATGGATGGGATGTCTTaGACAATGTCATGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTMDGMS*TMSCSS
Trigger: ACTGGAACATGACATTGTCCAAGACATCCCATCCAT...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTTTCAGTATCCGAGACTaGAGGTCCAAGGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGFSIRD*RSKALF
Trigger: GAACAAGGCCTTGGACCTCCAGTCTCGGATACTGAA...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTGGAGGGAATCATTTCTaGTTGCTCCAGTGGAACTCG +
Preference number: 4 (lower is better)
Translates to: STDPLSIPPHNFSRLMASGGNHF*LLQWNS
Trigger: CGAGTTCCACTGGAGCAACCAGAAATGATTCCCTCC...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTGCTGCCAGTTGCTTCTaGGAGGGAATCATTTCTGGT +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGAASCF*EGIISG
Trigger: ACCAGAAATGATTCCCTCCCAGAAGCAACTGGCAGC...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGCTGCCAGTTGCTTCTaGGAGGGAATCATTTCTGGT +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPAASCF*EGIISG
Trigger: ACCAGAAATGATTCCCTCCCAGAAGCAACTGGCAGC...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTACTTTAAGGCTTCGTTaGGCTGCCCTATGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTTLRLR*AALCAS
Trigger: GCTGGCACATAGGGCAGCCCAACGAAGCCTTAAAGT...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp AGGGTTGGCGTGATGACTGTACTTCCAGGCCAGTTTGTAGTTGGTGACTGCATCCACAACCTCGTTGTCTaGATTCAGACAGATCTGCAC +
Preference number: 4 (lower is better)
Translates to: RVGVMTVLPGQFVVGDCIHNLVV*IQTDLH
Trigger: GTGCAGATCTGTCTGAATCCAGACAACGAGGTTGTG...GATGCAGTCACCAACTACAAACTGGCCTGGAAGTACAGTCATCACGCCAACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCACAACCTCGTTGTCTaGATTCAGACAGATCTGCAC +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGHNLVV*IQTDLH
Trigger: GTGCAGATCTGTCTGAATCCAGACAACGAGGTTGTG...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTACTGCATACGCGCCTTaGGGATCTGCTTCAGGAACA +
Preference number: 4 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTTAYAP*GSASGT
Trigger: TGTTCCTGAAGCAGATCCCCAAGGCGCGTATGCAGT...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
3UTR CAA 72 bp CCTCTAGAAATCTTCAGCATGCGGTCAATGTACTCTTaGGCCTTGTCATGGCGGCCTATGAGCCAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: PLEIFSMRSMYS*ALSWRPMSQRK
Trigger: TTTCCTCTGGCTCATAGGCCGCCATGACAAGGCCAAAGAGTACATTGACCGCATGCTGAAGATTTCTAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS-3UTR TCA 90 bp TGCATCCTTGTAGGACTGCTCCTTCTCCATGATGAAGCCCATGTACTCATAGGCTTTTGTGAGCATAAATaGGGGCCATGGTGGAGCACA +
Preference number: 4 (lower is better)
Translates to: CILVGLLLLHDEAHVLIGFCEHK*GPWWST
Trigger: TGTGCTCCACCATGGCCCTCATTTATGCTCACAAAA...GCCTATGAGTACATGGGCTTCATCATGGAGAAGGAGCAGTCCTACAAGGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR TCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCATTTTGTGAGCATAAATaGGGGCCATGGTGGAGCACA +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPFCEHK*GPWWST
Trigger: TGTGCTCCACCATGGCCCTCATTTATGCTCACAAAA...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCTTGCTTCTCGGTCAATaGTTTCACATCTTTTGTGAG +
Preference number: 4 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTLLLGQ*FHIFCE
Trigger: CTCACAAAAGATGTGAAATCATTGACCGAGAAGCAA...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp GTTGGTGACTGCATCCTTGTAGGACTGCTCCTTCTCCATGATGAAGCCCATGTACTGTACTCAAGCTCCTaGATTGCTTCTCGGTCAATG +
Preference number: 4 (lower is better)
Translates to: VGDCILVGLLLLHDEAHVLYSSS*IASRSM
Trigger: CATTGACCGAGAAGCAATTCAGGAGCTTGAGTACAG...TACATGGGCTTCATCATGGAGAAGGAGCAGTCCTACAAGGATGCAGTCACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR TCA 90 bp GTGATGACTGTACTTCCAGGCCAGTTTGTAGTTGGTGACTGCATCCTTGTAGGACAGTTTCATGGCTTCTaGATACCACAGCAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: VMTVLPGQFVVGDCILVGQFHGF*IPQQGL
Trigger: GAGGCCTTGCTGTGGTATTCAGAAGCCATGAAACTG...TCCTACAAGGATGCAGTCACCAACTACAAACTGGCCTGGAAGTACAGTCATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR TCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCAGATATGACACAAGATaGTCCCTGTCAAACCAGCCA +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGRYDTR*SLSNQP
Trigger: TGGCTGGTTTGACAGGGATCATCTTGTGTCATATCT...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCTGGCCTTCTAAGATATaGCACAAGATGATCCCTGTC +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGWPSKI*HKMIPV
Trigger: GACAGGGATCATCTTGTGTCATATCTTAGAAGGCCA...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGAGCTGGTGCTGCTTTaGCTACAGGATTCAAGATCA +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPELVLL*LQDSRS
Trigger: TGATCTTGAATCCTGTAGTCAAAGCAGCACCAGCTC...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCATACCTCTGCAGTAATTaGACCCTGGTTCCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPYLCSN*TLVPKA
Trigger: TGCCTTTGGAACCAGGGTTCAATTACTGCAGAGGTA...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTTACCTCTGCAGTAATTaGACCCTGGTTCCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGYLCSN*TLVPKA
Trigger: TGCCTTTGGAACCAGGGTTCAATTACTGCAGAGGTA...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTCCAGTTTGTAGTTGGTaGCTGCATCCTTGTAGGACT +
Preference number: 4 (lower is better)
Translates to: STDPLSIPPHNFSRLMASPVCSW*LHPCRT
Trigger: AGTCCTACAAGGATGCAGTCACCAACTACAAACTGG...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp GAGGAAAAGGCCAGCATAGTACAGTGCAGTCCCACTGACTGTCTTGCGTATTTCATGGCATCCTGGATGTaGTCTTCTTTGAGGACTCCA +
Preference number: 4 (lower is better)
Translates to: EEKASIVQCSPTDCLAYFMASWM*SSLRTP
Trigger: TGGAGTCCTCAAAGAAGAGCACATCCAGGATGCCAT...GAAATACGCAAGACAGTCAGTGGGACTGCACTGTACTATGCTGGCCTTTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS-3UTR GCA 90 bp CTGCTCCTTCTCCATGATGAAGCCCATGTACTCATAGGCCTTGTAGCAGGACTTATGGCATCCTGGATGTaGTCTTCTTTGAGGACTCCA +
Preference number: 4 (lower is better)
Translates to: LLLLHDEAHVLIGLVAGLMASWM*SSLRTP
Trigger: TGGAGTCCTCAAAGAAGAGCACATCCAGGATGCCAT...AAGTCCTGCTACAAGGCCTATGAGTACATGGGCTTCATCATGGAGAAGGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAATGGCATCCTGGATGTaGTCTTCTTTGAGGACTCCA +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPMASWM*SSLRTP
Trigger: TGGAGTCCTCAAAGAAGAGCACATCCAGGATGCCAT...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGCCAGCATAGTACAGTaGAGTCCCACTGACTGTCTT +
Preference number: 4 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTASIVQ*SPTDCL
Trigger: AAGACAGTCAGTGGGACTGCACTGTACTATGCTGGC...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CAGATTTCTAACGTGATTGGTAGCTGTGGTCATGTTTCCTTCTCTTGCAAGCTCCCCATTTCTACTGTCTaGTCCCAGTCCTGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: QISNVIGSCGHVSFSCKLPISTV*SQSCRA
Trigger: AGCTCGGCAGGACTGGGAGCAGACAGTAGAAATGGG...GAGCTTGCAAGAGAAGGAAACATGACCACAGCTACCAATCACGTTAGAAATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431559.5
CDS-3UTR GCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTGTCGATCAGAGCTGGTaGTGCTTTGACTACAGGATT +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGVDQSW*CFDYRI
Trigger: AATCCTGTAGTCAAAGCAGCACCAGCTCTGATCGAC...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTGTCGATCAGAGCTGGTaGTGCTTTGACTACAGGATT +
Preference number: 4 (lower is better)
Translates to: STDPLSIPPHNFSRLMASVDQSW*CFDYRI
Trigger: AATCCTGTAGTCAAAGCAGCACCAGCTCTGATCGAC...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAAGCACATGCCAAAGTTaGCCTGAGCCAAGTAGATCT +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPSTCQS*PEPSRS
Trigger: AGATCTACTTGGCTCAGGGCAACTTTGGCATGTGCT...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTAGCACATGCCAAAGTTaGCCTGAGCCAAGTAGATCT +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGSTCQS*PEPSRS
Trigger: AGATCTACTTGGCTCAGGGCAACTTTGGCATGTGCT...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CTGAGGACATCGTTGCAGATTTCAATGGCCTCCACAAATTTCTTGTCCTTCAGGAGCAGTGGAAGCACATaGCAAAGTTGCCCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: LRTSLQISMASTNFLSFRSSGST*QSCPEP
Trigger: TGGCTCAGGGCAACTTTGGCATGTGCTTCCACTGCT...CCTGAAGGACAAGAAATTTGTGGAGGCCATTGAAATCTGCAACGATGTCCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTCATGTTCCAGTGCCTaGTTCAAAACTTTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPSCSSA*FKTFSA
Trigger: AGCAGAAAAAGTTTTGAAGCAGGCACTGGAACATGA...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTATAGAGGCTGCCAGTTaGTTCTGGGAGGGAATCATT +
Preference number: 4 (lower is better)
Translates to: STDPLSIPPHNFSRLMASIEAAS*FWEGII
Trigger: AATGATTCCCTCCCAGAAGCAACTGGCAGCCTCTAT...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCGTCATACTCTTTCTCTaGCAGGTAGTGCTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGVILFL*QVVLCK
Trigger: TTTGCAGAGCACTACCTGGCAGAGAAAGAGTATGAC...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTTCTTCTCCATGTAGTTaGTCTCAGCTCCCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGSSPCS*SQLPGS
Trigger: AGAACCAGGGAGCTGAGAGCAACTACATGGAGAAGA...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGCATCATGAAGTACATTaGCTCTCTGAAGCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLHHEVH*LSEASR
Trigger: TCTAGAGGCTTCAGAGAGGCAATGTACTTCATGATG...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440121.1
CDS-3UTR CCA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGTTCCAGGTACTCAATaGCTTTCTTCGCAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTVPGTQ*LSSQCG
Trigger: CCCACACTGCGAAGAAAGCCATTGAGTACCTGGAAC...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431162.6
CDS-3UTR CCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGCCCCAGCACATCTTTaGTGTCCTGAATTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPAPAHL*CPEFLV
Trigger: AACAAGGAATTCAGGACACCAAAGATGTGCTGGGGC...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430597.6
ENST00000431162.6
CDS-3UTR CCA 90 bp TCGGGGTGCTCCCTGAGGACATCGTTGCAGATTTCAATGGCCTCCACAAATTTCCCTTGTCCAGTTTCATaGCTTCTGAATACCACAGCA +
Preference number: 4 (lower is better)
Translates to: SGCSLRTSLQISMASTNFPCPVS*LLNTTA
Trigger: TGCTGTGGTATTCAGAAGCCATGAAACTGGACAAGG...GAAATTTGTGGAGGCCATTGAAATCTGCAACGATGTCCTCAGGGAGCACCCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCTTGTCCAGTTTCATaGCTTCTGAATACCACAGCA +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGPCPVS*LLNTTA
Trigger: TGCTGTGGTATTCAGAAGCCATGAAACTGGACAAGG...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTGACATCAGGAGGGCTTaGAGGAAAATTAGCACCTCA +
Preference number: 4 (lower is better)
Translates to: STDPLSIPPHNFSRLMASDIRRA*RKISTS
Trigger: TGAGGTGCTAATTTTCCTCCAAGCCCTCCTGATGTC...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGACATCAGGAGGGCTTaGAGGAAAATTAGCACCTCA +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPDIRRA*RKISTS
Trigger: TGAGGTGCTAATTTTCCTCCAAGCCCTCCTGATGTC...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CTGAGGACATCGTTGCAGATTTCAATGGCCTCCACAAATTTCTTGTCCTTCAGGGTAACCTGGGCTGCTTaGGGCAGAAGAGCAAGTACT +
Preference number: 4 (lower is better)
Translates to: LRTSLQISMASTNFLSFRVTWAA*GRRAST
Trigger: AGTACTTGCTCTTCTGCCCCAAGCAGCCCAGGTTAC...CCTGAAGGACAAGAAATTTGTGGAGGCCATTGAAATCTGCAACGATGTCCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTGACTTGTTTAAGAAGTaGAGACACGATCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: STDPLSIPPHNFSRLMASDLFKK*RHDLAW
Trigger: CCAGGCCAGATCGTGTCTCCACTTCTTAAACAAGTC...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTCGTCTTTATGGCCTCTaGATAGTCTCCAGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: STDPLSIPPHNFSRLMASRLYGL*IVSSLV
Trigger: AACAAGGCTGGAGACTATCCAGAGGCCATAAAGACG...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCTTTTCAGCGTCTTTATaGCCTCTGGATAGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGFSASL*PLDSLQ
Trigger: CTGGAGACTATCCAGAGGCCATAAAGACGCTGAAAA...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCTATAGCAGGACTGCTTaGGCAAGATGTTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGYSRTA*ARCSLA
Trigger: TGCTAAGGAACATCTTGCCCAAGCAGTCCTGCTATA...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp GTGATGACTGTACTTCCAGGCCAGTTTGTAGTTGGTGACTGCATCCTTGTAGGATTCAGTATCCGAGACTaGAGGTCCAAGGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: VMTVLPGQFVVGDCILVGFSIRD*RSKALF
Trigger: GAACAAGGCCTTGGACCTCCAGTCTCGGATACTGAA...TCCTACAAGGATGCAGTCACCAACTACAAACTGGCCTGGAAGTACAGTCATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGAGGGAATCATTTCTaGTTGCTCCAGTGGAACTCG +
Preference number: 4 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTGGNHF*LLQWNS
Trigger: CGAGTTCCACTGGAGCAACCAGAAATGATTCCCTCC...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCCGTTGCAGATTTCAATaGCCTCCACAAATTTCTTGT +
Preference number: 4 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPRCRFQ*PPQISC
Trigger: ACAAGAAATTTGTGGAGGCCATTGAAATCTGCAACG...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp AGCATAGTACAGTGCAGTCCCACTGACTGTCTTGCGTATTTCCTTCAGGCTGTATTTTGTGAGCATAAATaGGGGCCATGGTGGAGCACA +
Preference number: 4 (lower is better)
Translates to: SIVQCSPTDCLAYFLQAVFCEHK*GPWWST
Trigger: TGTGCTCCACCATGGCCCTCATTTATGCTCACAAAA...TACAGCCTGAAGGAAATACGCAAGACAGTCAGTGGGACTGCACTGTACTATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS-3UTR TCA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTTTTTGTGAGCATAAATaGGGGCCATGGTGGAGCACA +
Preference number: 4 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTFCEHK*GPWWST
Trigger: TGTGCTCCACCATGGCCCTCATTTATGCTCACAAAA...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGTTGCTTCTCGGTCAATaGTTTCACATCTTTTGTGAG +
Preference number: 4 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLLLLGQ*FHIFCE
Trigger: CTCACAAAAGATGTGAAATCATTGACCGAGAAGCAA...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp GTTGGCGTGATGACTGTACTTCCAGGCCAGTTTGTAGTTGGTGACTGCATCCTTACATCTTTGGTGTCCTaGATTCCTTGTTCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: VGVMTVLPGQFVVGDCILTSLVS*IPCSRY
Trigger: GTACCTGGAACAAGGAATTCAGGACACCAAAGATGT...AAGGATGCAGTCACCAACTACAAACTGGCCTGGAAGTACAGTCATCACGCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR TCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTAGTTCTGCTGCATCATaGAGTACATTGCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGSSAAS*STLPFP
Trigger: TGGGAAAGGCAATGTACTTCATGATGCAGCAGAACT...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431162.6
CDS-3UTR TCA 90 bp CAGATTTCTAACGTGATTGGTAGCTGTGGTCATGTTTCCTTCTCTTGCAAGCTCTGGCAGGAAGCTCCCTaGAGTCACAGTGATCTGGTT +
Preference number: 4 (lower is better)
Translates to: QISNVIGSCGHVSFSCKLWQEAP*SHSDLV
Trigger: AACCAGATCACTGTGACTTCAGGGAGCTTCCTGCCA...GAGCTTGCAAGAGAAGGAAACATGACCACAGCTACCAATCACGTTAGAAATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431559.5
CDS-3UTR TCA 90 bp CTGCTCCTTCTCCATGATGAAGCCCATGTACTCATAGGCCTTGTAGCAGGACTTTGGCCTTCTAAGATATaGCACAAGATGATCCCTGTC +
Preference number: 4 (lower is better)
Translates to: LLLLHDEAHVLIGLVAGLWPSKI*HKMIPV
Trigger: GACAGGGATCATCTTGTGTCATATCTTAGAAGGCCA...AAGTCCTGCTACAAGGCCTATGAGTACATGGGCTTCATCATGGAGAAGGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR TCA 90 bp CTGCTCCTTCTCCATGATGAAGCCCATGTACTCATAGGCCTTGTAGCAGGACTTCTTGGTGGTAAAGATTaGTGGCCGCTTCATGTTTCT +
Preference number: 4 (lower is better)
Translates to: LLLLHDEAHVLIGLVAGLLGGKD*WPLHVS
Trigger: AGAAACATGAAGCGGCCATCAATCTTTACCACCAAG...AAGTCCTGCTACAAGGCCTATGAGTACATGGGCTTCATCATGGAGAAGGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR TCA 90 bp TGCATCCTTGTAGGACTGCTCCTTCTCCATGATGAAGCCCATGTACTCATAGGCCTCCTGAGTAATACCTaGCCTGAGCCATCAAATACA +
Preference number: 4 (lower is better)
Translates to: CILVGLLLLHDEAHVLIGLLSNT*PEPSNT
Trigger: TGTATTTGATGGCTCAGGTCAGGTATTACTCAGGAG...GCCTATGAGTACATGGGCTTCATCATGGAGAAGGAGCAGTCCTACAAGGATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp CTCTCTGAAGCCTCTAGAAATCTTCAGCATGCGGTCAATGTACTCTTTGGCCTTACAGCTGCAGCCTGCTaGACATGGTGGAAGTACTTT +
Preference number: 4 (lower is better)
Translates to: LSEASRNLQHAVNVLFGLTAAAC*TWWKYF
Trigger: AAAGTACTTCCACCATGTGCAGCAGGCTGCAGCTGT...AAGGCCAAAGAGTACATTGACCGCATGCTGAAGATTTCTAGAGGCTTCAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS-3UTR GCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCTCAAGCTCCTGAATTaGTTCTCGGTCAATGATTTC +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGLKLLN*FSVNDF
Trigger: GAAATCATTGACCGAGAAGCAATTCAGGAGCTTGAG...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTGATCAGAGCTGGTGCTaGTTTGACTACAGGATTCAA +
Preference number: 4 (lower is better)
Translates to: STDPLSIPPHNFSRLMASDQSWC*FDYRIQ
Trigger: TTGAATCCTGTAGTCAAAGCAGCACCAGCTCTGATC...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTGCTCTTGTAAACCTTTaGCAGCAAAAGCAGGCACTT +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGALVNL*QQKQAL
Trigger: AAGTGCCTGCTTTTGCTGGCAAAGGTTTACAAGAGC...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp AAGTTTGAAGCCAATGGCAGGGTTGGCGTGATGACTGTACTTCCAGGCCAGTTTGTCATACTCTTTCTCTaGCAGGTAGTGCTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: KFEANGRVGVMTVLPGQFVILFL*QVVLCK
Trigger: TTTGCAGAGCACTACCTGGCAGAGAAAGAGTATGAC...AAACTGGCCTGGAAGTACAGTCATCACGCCAACCCTGCCATTGGCTTCAAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp TCTCTGAAGCCTCTAGAAATCTTCAGCATGCGGTCAATGTACTCTTTGGCCTTGGCCTGCTGCACATGGTaGAAGTACTTTTCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: SLKPLEIFSMRSMYSLALACCTW*KYFSWL
Trigger: TAGCCAGGAAAAGTACTTCCACCATGTGCAGCAGGC...CAAGGCCAAAGAGTACATTGACCGCATGCTGAAGATTTCTAGAGGCTTCAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS-3UTR CCA 90 bp TTGGTAGCTGTGGTCATGTTTCCTTCTCTTGCAAGCTCATGCACGGTTAGAATTGCAGCCTGCTGCACATaGTGGAAGTACTTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LVAVVMFPSLASSCTVRIAACCT*WKYFSW
Trigger: CCAGGAAAAGTACTTCCACCATGTGCAGCAGGCTGC...AATTCTAACCGTGCATGAGCTTGCAAGAGAAGGAAACATGACCACAGCTACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431559.5
CDS-3UTR CCA 90 bp AAGCCTCTAGAAATCTTCAGCATGCGGTCAATGTACTCTTTGGCCTTGTCATGGGGTCAATGTACTCTTTaGCCTTGTCATGGCGGCCTA +
Preference number: 4 (lower is better)
Translates to: KPLEIFSMRSMYSLALSWGQCTL*PCHGGL
Trigger: TAGGCCGCCATGACAAGGCCAAAGAGTACATTGACC...CCATGACAAGGCCAAAGAGTACATTGACCGCATGCTGAAGATTTCTAGAGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS-3UTR CCA 90 bp GATGAAGCCCATGTACTCATAGGCCTTGTAGCAGGACTTGTTGTATTGCACACAGTTCCAGGTACTCAATaGCTTTCTTCGCAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: DEAHVLIGLVAGLVVLHTVPGTQ*LSSQCG
Trigger: CCCACACTGCGAAGAAAGCCATTGAGTACCTGGAAC...TGTGTGCAATACAACAAGTCCTGCTACAAGGCCTATGAGTACATGGGCTTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp GTTGCAGATTTCAATGGCCTCCACAAATTTCTTGTCCTTCAGGTAGTTGAAAGCGAAGTCACAGTGATCTaGTTCACCACCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VADFNGLHKFLVLQVVESEVTVI*FTTSRA
Trigger: GGCCCTGGAGGTGGTGAACCAGATCACTGTGACTTC...GCTTTCAACTACCTGAAGGACAAGAAATTTGTGGAGGCCATTGAAATCTGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp TTTCCTTCTCTTGCAAGCTCATGCACGGTTAGAATTTGGCAGGCATCAATATTGGAAGTCACAGTGATCTaGTTCACCACCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: FPSLASSCTVRIWQASILEVTVI*FTTSRA
Trigger: GGCCCTGGAGGTGGTGAACCAGATCACTGTGACTTC...CAATATTGATGCCTGCCAAATTCTAACCGTGCATGAGCTTGCAAGAGAAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431559.5
CDS-3UTR CCA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCTGCACGGTTAGAATTTaGCAGGCATCAATATTGCTC +
Preference number: 4 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGCTVRI*QASILL
Trigger: GAGCAATATTGATGCCTGCCAAATTCTAACCGTGCA...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCTTGTCCAGTTTCATaGCTTCTGAATACCACAGCA +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGPCPVS*LLNTTA
Trigger: TGCTGTGGTATTCAGAAGCCATGAAACTGGACAAGG...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCATATAGCAGGACTGCTTaGGCAAGATGTTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPYSRTA*ARCSLA
Trigger: TGCTAAGGAACATCTTGCCCAAGCAGTCCTGCTATA...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp CAGATTTCTAACGTGATTGGTAGCTGTGGTCATGTTTCCTTCTCTTGCAAGCTCACACAGGGTCATTGCTaGATTTTTCCAGGCCCACAG +
Preference number: 4 (lower is better)
Translates to: QISNVIGSCGHVSFSCKLTQGHC*IFPGPQ
Trigger: CTGTGGGCCTGGAAAAATTCAGCAATGACCCTGTGT...GAGCTTGCAAGAGAAGGAAACATGACCACAGCTACCAATCACGTTAGAAATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431559.5
CDS-3UTR TCA 90 bp ATGTTTCCTTCTCTTGCAAGCTCATGCACGGTTAGAATTTGGCAGGCATCAATATCCCTGAAGTCACAGTaGTCTGGTTCACCACCTCCA +
Preference number: 4 (lower is better)
Translates to: MFPSLASSCTVRIWQASISLKSQ*SGSPPP
Trigger: TGGAGGTGGTGAACCAGATCACTGTGACTTCAGGGA...TATTGATGCCTGCCAAATTCTAACCGTGCATGAGCTTGCAAGAGAAGGAAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431559.5
CDS-3UTR TCA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTTGGCCTTCTAAGATATaGCACAAGATGATCCCTGTC +
Preference number: 4 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTWPSKI*HKMIPV
Trigger: GACAGGGATCATCTTGTGTCATATCTTAGAAGGCCA...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp TTGGTAGCTGTGGTCATGTTTCCTTCTCTTGCAAGCTCATGCACGGTTAGAATTACAGCTGCAGCCTGCTaGACATGGTGGAAGTACTTT +
Preference number: 4 (lower is better)
Translates to: LVAVVMFPSLASSCTVRITAAAC*TWWKYF
Trigger: AAAGTACTTCCACCATGTGCAGCAGGCTGCAGCTGT...AATTCTAACCGTGCATGAGCTTGCAAGAGAAGGAAACATGACCACAGCTACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431559.5
CDS-3UTR GCA 90 bp TTTCCTTCTCTTGCAAGCTCATGCACGGTTAGAATTTGGCAGGCATCAATATTGCGAGCTAAGAACAGCTaGATCTTCAGGACGAGGGCT +
Preference number: 4 (lower is better)
Translates to: FPSLASSCTVRIWQASILRAKNS*IFRTRA
Trigger: AGCCCTCGTCCTGAAGATGCAGCTGTTCTTAGCTCG...CAATATTGATGCCTGCCAAATTCTAACCGTGCATGAGCTTGCAAGAGAAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431559.5
CDS-3UTR GCA 90 bp GTGCTCCCTGAGGACATCGTTGCAGATTTCAATGGCCTCCACAAATTTCTTGTCGATCAGAGCTGGTGCTaGTTTGACTACAGGATTCAA +
Preference number: 4 (lower is better)
Translates to: VLPEDIVADFNGLHKFLVDQSWC*FDYRIQ
Trigger: TTGAATCCTGTAGTCAAAGCAGCACCAGCTCTGATC...GACAAGAAATTTGTGGAGGCCATTGAAATCTGCAACGATGTCCTCAGGGAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGAATGTCATGTTCCAGTaGCTGCTTCAAAACTTTTTC +
Preference number: 4 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLNVMFQ*LLQNFF
Trigger: GAAAAAGTTTTGAAGCAGGCACTGGAACATGACATT...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAAAGGCCTCTTTCACTTaGTTCTTCAGGATGAAGAGA +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPKASFT*FFRMKR
Trigger: TCTCTTCATCCTGAAGAACCAAGTGAAAGAGGCCTT...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTAAGGCCTCTTTCACTTaGTTCTTCAGGATGAAGAGA +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGKASFT*FFRMKR
Trigger: TCTCTTCATCCTGAAGAACCAAGTGAAAGAGGCCTT...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAATGGATGGGATGTCTTaGACAATGTCATGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPMDGMS*TMSCSS
Trigger: ACTGGAACATGACATTGTCCAAGACATCCCATCCAT...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR TCA 90 bp TGCATCCTTGTAGGACTGCTCCTTCTCCATGATGAAGCCCATGTACTCATAGGCTTGCTTCTCGGTCAATaGTTTCACATCTTTTGTGAG +
Preference number: 4 (lower is better)
Translates to: CILVGLLLLHDEAHVLIGLLLGQ*FHIFCE
Trigger: CTCACAAAAGATGTGAAATCATTGACCGAGAAGCAA...GCCTATGAGTACATGGGCTTCATCATGGAGAAGGAGCAGTCCTACAAGGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR TCA 90 bp AAGCCTCTAGAAATCTTCAGCATGCGGTCAATGTACTCTTTGGCCTTGTCATGGGGTGGCACTCACCAATaGTTTCACATCTTTTGTGAG +
Preference number: 4 (lower is better)
Translates to: KPLEIFSMRSMYSLALSWGGTHQ*FHIFCE
Trigger: CTCACAAAAGATGTGAAATCATTGGTGAGTGCCACC...CCATGACAAGGCCAAAGAGTACATTGACCGCATGCTGAAGATTTCTAGAGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS-3UTR TCA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTATCAGATTTCTAACGTaGTTGGTAGCTGTGGTCATG +
Preference number: 4 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTIRFLT*LVAVVM
Trigger: CATGACCACAGCTACCAATCACGTTAGAAATCTGAT...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440121.1
CDS-3UTR GCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTTCATGTTCCAGTGCCTaGTTCAAAACTTTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGSCSSA*FKTFSA
Trigger: AGCAGAAAAAGTTTTGAAGCAGGCACTGGAACATGA...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp CTGAGGACATCGTTGCAGATTTCAATGGCCTCCACAAATTTCTTGTCCTTCAGGGCTCTTGTAAACCTTTaGCAGCAAAAGCAGGCACTT +
Preference number: 4 (lower is better)
Translates to: LRTSLQISMASTNFLSFRALVNL*QQKQAL
Trigger: AAGTGCCTGCTTTTGCTGGCAAAGGTTTACAAGAGC...CCTGAAGGACAAGAAATTTGTGGAGGCCATTGAAATCTGCAACGATGTCCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp ATTTCTAACGTGATTGGTAGCTGTGGTCATGTTTCCTTCTCTTGCAAGCTCATGGCCTGCTGCACATGGTaGAAGTACTTTTCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: ISNVIGSCGHVSFSCKLMACCTW*KYFSWL
Trigger: TAGCCAGGAAAAGTACTTCCACCATGTGCAGCAGGC...CATGAGCTTGCAAGAGAAGGAAACATGACCACAGCTACCAATCACGTTAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431559.5
CDS-3UTR CCA 90 bp GTTGGTGACTGCATCCTTGTAGGACTGCTCCTTCTCCATGATGAAGCCCATGTACGTTGCAGATTTCAATaGCCTCCACAAATTTCTTGT +
Preference number: 4 (lower is better)
Translates to: VGDCILVGLLLLHDEAHVRCRFQ*PPQISC
Trigger: ACAAGAAATTTGTGGAGGCCATTGAAATCTGCAACG...TACATGGGCTTCATCATGGAGAAGGAGCAGTCCTACAAGGATGCAGTCACCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCGTTGCAGATTTCAATaGCCTCCACAAATTTCTTGT +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGRCRFQ*PPQISC
Trigger: ACAAGAAATTTGTGGAGGCCATTGAAATCTGCAACG...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR GCA 90 bp GAAGCCCATGTACTCATAGGCCTTGTAGCAGGACTTGTTGTATTGCACACAGCGAATGTCATGTTCCAGTaGCTGCTTCAAAACTTTTTC +
Preference number: 4 (lower is better)
Translates to: EAHVLIGLVAGLVVLHTANVMFQ*LLQNFF
Trigger: GAAAAAGTTTTGAAGCAGGCACTGGAACATGACATT...CGCTGTGTGCAATACAACAAGTCCTGCTACAAGGCCTATGAGTACATGGGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAAATGTCATGTTCCAGTaGCTGCTTCAAAACTTTTTC +
Preference number: 4 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPNVMFQ*LLQNFF
Trigger: GAAAAAGTTTTGAAGCAGGCACTGGAACATGACATT...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CCA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTTCAAAGAACTTACTGTaGTCATGTTTCCTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGSKNLL*SCFLLL
Trigger: CAAGAGAAGGAAACATGACCACAGTAAGTTCTTTGA...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431162.6
CDS-3UTR CCA 90 bp GATGAAGCCCATGTACTCATAGGCCTTGTAGCAGGACTTGTTGTATTGCACACAAAGGCCTCTTTCACTTaGTTCTTCAGGATGAAGAGA +
Preference number: 4 (lower is better)
Translates to: DEAHVLIGLVAGLVVLHTKASFT*FFRMKR
Trigger: TCTCTTCATCCTGAAGAACCAAGTGAAAGAGGCCTT...TGTGTGCAATACAACAAGTCCTGCTACAAGGCCTATGAGTACATGGGCTTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR GCA 90 bp CTGAGGACATCGTTGCAGATTTCAATGGCCTCCACAAATTTCTTGTCCTTCAGGTCATGTTCCAGTGCCTaGTTCAAAACTTTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LRTSLQISMASTNFLSFRSCSSA*FKTFSA
Trigger: AGCAGAAAAAGTTTTGAAGCAGGCACTGGAACATGA...CCTGAAGGACAAGAAATTTGTGGAGGCCATTGAAATCTGCAACGATGTCCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR TCA 90 bp ATGTTTCCTTCTCTTGCAAGCTCATGCACGGTTAGAATTTGGCAGGCATCAATAATCAGATTTCTAACGTaGTTGGTAGCTGTGGTCATG +
Preference number: 4 (lower is better)
Translates to: MFPSLASSCTVRIWQASIIRFLT*LVAVVM
Trigger: CATGACCACAGCTACCAATCACGTTAGAAATCTGAT...TATTGATGCCTGCCAAATTCTAACCGTGCATGAGCTTGCAAGAGAAGGAAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431559.5
CDS-3UTR CCA 90 bp TGCCTTAATCAGATTTCTAACGTGATTGGTAGCTGTGGTCATGTTTCCTTCTCTTGCACGGTTAGAATTTaGCAGGCATCAATATTGCTC +
Preference number: 4 (lower is better)
Translates to: CLNQISNVIGSCGHVSFSCTVRI*QASILL
Trigger: GAGCAATATTGATGCCTGCCAAATTCTAACCGTGCA...AGAGAAGGAAACATGACCACAGCTACCAATCACGTTAGAAATCTGATTAAGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431559.5
CDS GCA 90 bp CATCTCGGGCCGCTCGCGGCTCCGAGTCCGGGTCTGGTGGGGCGGTaGAGAGCGGGATTCCCGAGGCAGGGTCGTGGGCACTCTATCGCG +
Preference number: 5 (lower is better)
Translates to: HLGPLAAPSPGLVGR*RAGFPRQGRGHSIA
Trigger: CGCGATAGAGTGCCCACGACCCTGCCTCGGGAATCCCGCTCTGCACCGCCCCACCAGACCCGGACTCGGAGCCGCGAGCGGCCCGAGATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000431559.5
ENST00000459702.1
ENST00000479954.5
ENST00000490036.5
ENST00000493337.5
ENST00000683103.1
CDS CCA 90 bp TTGCTGCTCATCTCGGGCCGCTCGCGGCTCCGAGTCCGGGTCTGGTaGGGCGGTGCAGAGCGGGATTCCCGAGGCAGGGTCGTGGGCACT +
Preference number: 5 (lower is better)
Translates to: LLLISGRSRLRVRVW*GGAERDSRGRVVGT
Trigger: AGTGCCCACGACCCTGCCTCGGGAATCCCGCTCTGCACCGCCCCACCAGACCCGGACTCGGAGCCGCGAGCGGCCCGAGATGAGCAGCAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000431559.5
ENST00000459702.1
ENST00000479954.5
ENST00000490036.5
ENST00000493337.5
ENST00000683103.1
CDS CCA 90 bp TCATTGCTGCTCATCTCGGGCCGCTCGCGGCTCCGAGTCCGGGTCTaGTGGGGCGGTGCAGAGCGGGATTCCCGAGGCAGGGTCGTGGGC +
Preference number: 5 (lower is better)
Translates to: SLLLISGRSRLRVRV*WGGAERDSRGRVVG
Trigger: GCCCACGACCCTGCCTCGGGAATCCCGCTCTGCACCGCCCCACCAGACCCGGACTCGGAGCCGCGAGCGGCCCGAGATGAGCAGCAATGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000431559.5
ENST00000459702.1
ENST00000479954.5
ENST00000490036.5
ENST00000493337.5
ENST00000683103.1
CDS CCA 90 bp GGGTCTGGTGGGGCGGTGCAGAGCGGGATTCCCGAGGCAGGGTCGTaGGCACTCTATCGCGGCGGGCGGTTGAAGGCGTTACAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: GSGGAVQSGIPEAGS*ALYRGGRLKALQSL
Trigger: CAAGGACTGTAACGCCTTCAACCGCCCGCCGCGATAGAGTGCCCACGACCCTGCCTCGGGAATCCCGCTCTGCACCGCCCCACCAGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000431162.6
ENST00000479954.5
ENST00000683103.1
CDS GCA 90 bp GTCACAGGGACCCTGGGAAGGGAGGAAGGGAGGGGAGGGAGTGGGTaGTGGGGGCTTCCTACCACAGAAGCGGTCTCATGGTTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: VTGTLGREEGRGGSG*WGLPTTEAVSWFCS
Trigger: TGAGCAGAACCATGAGACCGCTTCTGTGGTAGGAAGCCCCCAGCACCCACTCCCTCCCCTCCCTTCCTCCCTTCCCAGGGTCCCTGTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473587.1
ENST00000481734.1
CDS CCA 90 bp ACAGGGACCCTGGGAAGGGAGGAAGGGAGGGGAGGGAGTGGGTGCTaGGGGCTTCCTACCACAGAAGCGGTCTCATGGTTCTGCTCAGTC +
Preference number: 5 (lower is better)
Translates to: TGTLGREEGRGGSGC*GLPTTEAVSWFCSV
Trigger: GACTGAGCAGAACCATGAGACCGCTTCTGTGGTAGGAAGCCCCCAGCACCCACTCCCTCCCCTCCCTTCCTCCCTTCCCAGGGTCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473587.1
ENST00000481734.1
CDS CCA 90 bp TCTGGTCACAGGGACCCTGGGAAGGGAGGAAGGGAGGGGAGGGAGTaGGTGCTGGGGGCTTCCTACCACAGAAGCGGTCTCATGGTTCTG +
Preference number: 5 (lower is better)
Translates to: SGHRDPGKGGREGRE*VLGASYHRSGLMVL
Trigger: CAGAACCATGAGACCGCTTCTGTGGTAGGAAGCCCCCAGCACCCACTCCCTCCCCTCCCTTCCTCCCTTCCCAGGGTCCCTGTGACCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473587.1
ENST00000481734.1
CDS GCA 90 bp CCACTGCCAGCCAGCCTACCGCTTCCGGCTAAAGGGCAGAGTAGGTaGAGCACTGAGTCCTCTCTGCCCGACAGCTCCTCAGAGGTGTGT +
Preference number: 5 (lower is better)
Translates to: PLPASLPLPAKGQSR*STESSLPDSSSEVC
Trigger: ACACACCTCTGAGGAGCTGTCGGGCAGAGAGGACTCAGTGCTGCACCTACTCTGCCCTTTAGCCGGAAGCGGTAGGCTGGCTGGCAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473587.1
ENST00000481734.1
CDS CCA 90 bp GCACCCAGGGGGTCTTGGCCAGGCGCTTCAACTGCATACGCGCCTTaGGGATCTGCTTCAGGAACACGTAGGCTTGTGCCAAGGCCAGCA +
Preference number: 5 (lower is better)
Translates to: APRGSWPGASTAYAP*GSASGTRRLVPRPA
Trigger: TGCTGGCCTTGGCACAAGCCTACGTGTTCCTGAAGCAGATCCCCAAGGCGCGTATGCAGTTGAAGCGCCTGGCCAAGACCCCCTGGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000472866.6
ENST00000490245.1
ENST00000493856.5
ENST00000683103.1
CDS GCA 90 bp TGGGGGCTTCCTACCACAGAAGCGGTCTCATGGTTCTGCTCAGTCTaGAGGAGGATGGCACAGTGCTGCTCACACAGGTCCAGGTGCCCC +
Preference number: 5 (lower is better)
Translates to: WGLPTTEAVSWFCSV*RRMAQCCSHRSRCP
Trigger: GGGGCACCTGGACCTGTGTGAGCAGCACTGTGCCATCCTCCTGCAGACTGAGCAGAACCATGAGACCGCTTCTGTGGTAGGAAGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473587.1
ENST00000481734.1
CDS GCA 90 bp ACCTCACCCCACCTTAGACTGGCCCAGGAGATTGATGCTGCCCACTaGCAGCCAGCCTACCGCTTCCGGCTAAAGGGCAGAGTAGGTGCA +
Preference number: 5 (lower is better)
Translates to: TSPHLRLAQEIDAAH*QPAYRFRLKGRVGA
Trigger: TGCACCTACTCTGCCCTTTAGCCGGAAGCGGTAGGCTGGCTGGCAGTGGGCAGCATCAATCTCCTGGGCCAGTCTAAGGTGGGGTGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473587.1
ENST00000481734.1
CDS CCA 90 bp GGAGGGAGTGGGTGCTGGGGGCTTCCTACCACAGAAGCGGTCTCATaGTTCTGCTCAGTCTGCAGGAGGATGGCACAGTGCTGCTCACAC +
Preference number: 5 (lower is better)
Translates to: GGSGCWGLPTTEAVS*FCSVCRRMAQCCSH
Trigger: GTGTGAGCAGCACTGTGCCATCCTCCTGCAGACTGAGCAGAACCATGAGACCGCTTCTGTGGTAGGAAGCCCCCAGCACCCACTCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473587.1
ENST00000481734.1
CDS-3UTR CAA 90 bp TTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCAGCTAGGGCCTCAGGGACCGTCTCTTCCTCCCCCTaGTGCTTCCTGGACATCAGG +
Preference number: 5 (lower is better)
Translates to: LMASTGPGPLTPARASGTVSSSP*CFLDIR
Trigger: CCTGATGTCCAGGAAGCACAAGGGGGAGGAAGAGAC...GGTCCCTGAGGCCCTAGCTGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS GCA 90 bp CTGCATACGCGCCTTGGGGATCTGCTTCAGGAACACGTAGGCTTGTaGCAAGGCCAGCAGGGCAGGGACGCTGTCCTTGCAGCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: LHTRLGDLLQEHVGL*QGQQGRDAVLAAVS
Trigger: AGAAACTGCTGCAAGGACAGCGTCCCTGCCCTGCTGGCCTTGGCACAAGCCTACGTGTTCCTGAAGCAGATCCCCAAGGCGCGTATGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS GCA 90 bp AGTGGGTGCTGGGGGCTTCCTACCACAGAAGCGGTCTCATGGTTCTaGTCAGTCTGCAGGAGGATGGCACAGTGCTGCTCACACAGGTCC +
Preference number: 5 (lower is better)
Translates to: SGCWGLPTTEAVSWF*SVCRRMAQCCSHRS
Trigger: GGACCTGTGTGAGCAGCACTGTGCCATCCTCCTGCAGACTGAGCAGAACCATGAGACCGCTTCTGTGGTAGGAAGCCCCCAGCACCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473587.1
ENST00000481734.1
CDS CCA 90 bp CTACCACAGAAGCGGTCTCATGGTTCTGCTCAGTCTGCAGGAGGATaGCACAGTGCTGCTCACACAGGTCCAGGTGCCCCTGGAGCAGGT +
Preference number: 5 (lower is better)
Translates to: LPQKRSHGSAQSAGG*HSAAHTGPGAPGAG
Trigger: ACCTGCTCCAGGGGCACCTGGACCTGTGTGAGCAGCACTGTGCCATCCTCCTGCAGACTGAGCAGAACCATGAGACCGCTTCTGTGGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473587.1
ENST00000481734.1
CDS TCA 90 bp GGAAGCACATGCCAAAGTTGCCCTGAGCCAAGTAGATCTGACACATaGGGAGATGGGCATCCACGGAGGCGGGGTCCAGCTCCAGGCAAC +
Preference number: 5 (lower is better)
Translates to: GSTCQSCPEPSRSDT*GDGHPRRRGPAPGN
Trigger: GTTGCCTGGAGCTGGACCCCGCCTCCGTGGATGCCCATCTCCTCATGTGTCAGATCTACTTGGCTCAGGGCAACTTTGGCATGTGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS GCA 90 bp AGGTCAGCCATCAACACAGAAGCGGTCTCATGGTTCTGCTCAGTCTaGAGGAGGATGGCACAGTGCTGCTCACACAGGTCCAGGTGCCCC +
Preference number: 5 (lower is better)
Translates to: RSAINTEAVSWFCSV*RRMAQCCSHRSRCP
Trigger: GGGGCACCTGGACCTGTGTGAGCAGCACTGTGCCATCCTCCTGCAGACTGAGCAGAACCATGAGACCGCTTCTGTGTTGATGGCTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000472866.6
ENST00000493856.5
ENST00000683103.1
CDS CCA 90 bp GCATGCTGGAGAAGTGAAGCTCCACTGCCTCCTTCAGGAGCGCTGTaGTCTCTTCCTCCCCCTTGTGCTTCCTGGACATCAGGAGGGCTT +
Preference number: 5 (lower is better)
Translates to: ACWRSEAPLPPSGAL*SLPPPCASWTSGGL
Trigger: AAGCCCTCCTGATGTCCAGGAAGCACAAGGGGGAGGAAGAGACCACAGCGCTCCTGAAGGAGGCAGTGGAGCTTCACTTCTCCAGCATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS CCA 90 bp TTCAGCCGGAGGGCCTCCACCAGTTCCAATAAGATGGATGCCCGCTaGCTAGGCTGCACAGAGGGCCTGAGGAACTTTCTGCCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: FSRRASTSSNKMDAR*LGCTEGLRNFLPSS
Trigger: GGAAGAAGGCAGAAAGTTCCTCAGGCCCTCTGTGCAGCCTAGCCAGCGGGCATCCATCTTATTGGAACTGGTGGAGGCCCTCCGGCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000466875.1
ENST00000683103.1
CDS CCA 90 bp TCTCGGGCTCCAGAATGCTCATTAAGGCATCGCCCAGTAGCAGGCTaGTGTGGGGGCCAGGCAGATGTTCACAGAGCTCACGGTAGCATC +
Preference number: 5 (lower is better)
Translates to: SRAPECSLRHRPVAG*CGGQADVHRAHGSI
Trigger: GATGCTACCGTGAGCTCTGTGAACATCTGCCTGGCCCCCACACCAGCCTGCTACTGGGCGATGCCTTAATGAGCATTCTGGAGCCCGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000471025.1
ENST00000683103.1
CDS CCA 90 bp TCAACACAGAAGCGGTCTCATGGTTCTGCTCAGTCTGCAGGAGGATaGCACAGTGCTGCTCACACAGGTCCAGGTGCCCCTGGAGCAGGT +
Preference number: 5 (lower is better)
Translates to: STQKRSHGSAQSAGG*HSAAHTGPGAPGAG
Trigger: ACCTGCTCCAGGGGCACCTGGACCTGTGTGAGCAGCACTGTGCCATCCTCCTGCAGACTGAGCAGAACCATGAGACCGCTTCTGTGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000472866.6
ENST00000493856.5
ENST00000683103.1
CDS-3UTR CAA 90 bp TCTACTGGTCCAGGCCCCTTGACCCCAGCTAGGGCCTCAGGGACCTTCGGGCCTAGAGCTGGTGCTGCTTaGACTACAGGATTCAAGATC +
Preference number: 5 (lower is better)
Translates to: STGPGPLTPARASGTFGPRAGAA*TTGFKI
Trigger: GATCTTGAATCCTGTAGTCAAAGCAGCACCAGCTCT...AGGCCCGAAGGTCCCTGAGGCCCTAGCTGGGGTCAAGGGGCCTGGACCAGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CAA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCACAGGAACACGTAGGCTaGTGCCAAGGCCAGCAGGGC +
Preference number: 5 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPQEHVG*CQGQQG
Trigger: GCCCTGCTGGCCTTGGCACAAGCCTACGTGTTCCTG...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCGCAGGGACGCTGTCCTaGCAGCAGTTTCTCGGCGGT +
Preference number: 5 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPAGTLS*QQFLGG
Trigger: ACCGCCGAGAAACTGCTGCAAGGACAGCGTCCCTGC...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS GCA 90 bp AGAGCCAAGAGGGATGCCTTGCATGCTGGAGAAGTGAAGCTCCACTaGCTCCTTCAGGAGCGCTGTGGTCTCTTCCTCCCCCTTGTGCTT +
Preference number: 5 (lower is better)
Translates to: RAKRDALHAGEVKLH*LLQERCGLFLPLVL
Trigger: AAGCACAAGGGGGAGGAAGAGACCACAGCGCTCCTGAAGGAGGCAGTGGAGCTTCACTTCTCCAGCATGCAAGGCATCCCTCTTGGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS GCA 90 bp CATCCCGCAGCCCTAGTGTGTGTGTGGCTCCTTGCCTTGTTGTATTaGACACAGCGCCGCAGCAGTTCTAAGGCGAGGTCGAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: HPAALVCVWLLALLY*TQRRSSSKARSNLL
Trigger: CAGCAAGTTCGACCTCGCCTTAGAACTGCTGCGGCGCTGTGTGCAATACAACAAGGCAAGGAGCCACACACACACTAGGGCTGCGGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490245.1
CDS-3UTR CAA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCATATCGCGGCGGGCGGTaGAAGGCGTTACAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPYRGGR*KALQSL
Trigger: CAAGGACTGTAACGCCTTCAACCGCCCGCCGCGATA...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431162.6
CDS-3UTR CAA 90 bp TTGTTGTATTGCACACAGCGCCGCAGCAGTTCTAAGGCGAGGTCGAACTTGCTGCAGGAACACGTAGGCTaGTGCCAAGGCCAGCAGGGC +
Preference number: 5 (lower is better)
Translates to: LLYCTQRRSSSKARSNLLQEHVG*CQGQQG
Trigger: GCCCTGCTGGCCTTGGCACAAGCCTACGTGTTCCTG...CAGCAAGTTCGACCTCGCCTTAGAACTGCTGCGGCGCTGTGTGCAATACAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS GCA 90 bp CCCATTTCTACTGTCTGCTCCCAGTCCTGCCGAGCTAAGAACAGCTaGATCTTCAGGACGAGGGCTGGCAGGAAGCTCCCTGAAGTCACA +
Preference number: 5 (lower is better)
Translates to: PISTVCSQSCRAKNS*IFRTRAGRKLPEVT
Trigger: TGTGACTTCAGGGAGCTTCCTGCCAGCCCTCGTCCTGAAGATGCAGCTGTTCTTAGCTCGGCAGGACTGGGAGCAGACAGTAGAAATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000431559.5
ENST00000440121.1
ENST00000459702.1
ENST00000479954.5
ENST00000493337.5
ENST00000683103.1
CDS GCA 90 bp TCCACTGCCTCCTTCAGGAGCGCTGTGGTCTCTTCCTCCCCCTTGTaGTTCCTGGACATCAGGAGGGCTTGGAGGAAAATTAGCACCTCA +
Preference number: 5 (lower is better)
Translates to: STASFRSAVVSSSPL*FLDIRRAWRKISTS
Trigger: TGAGGTGCTAATTTTCCTCCAAGCCCTCCTGATGTCCAGGAAGCACAAGGGGGAGGAAGAGACCACAGCGCTCCTGAAGGAGGCAGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS GCA 90 bp ATGCGGTTCTCTTCTGGTGTGCCACCGAACTCATTGATGGTGTCCTaGATGACCTTGGTGGCCTCATGTAGCTCCCCATTCAGCCGGAGG +
Preference number: 5 (lower is better)
Translates to: MRFSSGVPPNSLMVS*MTLVASCSSPFSRR
Trigger: CCTCCGGCTGAATGGGGAGCTACATGAGGCCACCAAGGTCATGCAGGACACCATCAATGAGTTCGGTGGCACACCAGAAGAGAACCGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS GCA 90 bp TCTGCACCATGTGGTAGATGGCGCTCTGGCCCCAAGTGCTGTCCTTaGGTGCCTTGTTCAGGAACTTTAAGGCTTCGTTGGGCTGCCCTA +
Preference number: 5 (lower is better)
Translates to: SAPCGRWRSGPKCCP*VPCSGTLRLRWAAL
Trigger: TAGGGCAGCCCAACGAAGCCTTAAAGTTCCTGAACAAGGCACGCAAGGACAGCACTTGGGGCCAGAGCGCCATCTACCACATGGTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000465962.1
ENST00000472866.6
ENST00000490245.1
ENST00000493856.5
ENST00000683103.1
CDS CCA 90 bp CACTTACCTCCAGAATGCTCATTAAGGCATCGCCCAGTAGCAGGCTaGTGTGGGGGCCAGGCAGATGTTCACAGAGCTCACGGTAGCATC +
Preference number: 5 (lower is better)
Translates to: HLPPECSLRHRPVAG*CGGQADVHRAHGSI
Trigger: GATGCTACCGTGAGCTCTGTGAACATCTGCCTGGCCCCCACACCAGCCTGCTACTGGGCGATGCCTTAATGAGCATTCTGGAGGTAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466875.1
CDS CCA 90 bp GGCTGCCAGTTGCTTCTGGGAGGGAATCATTTCTGGTTGCTCCAGTaGAACTCGCTTCAGTATCCGAGACTGGAGGTCCAAGGCCTCGAG +
Preference number: 5 (lower is better)
Translates to: GCQLLLGGNHFWLLQ*NSLQYPRLEVQGLE
Trigger: CTCGAGGCCTTGGACCTCCAGTCTCGGATACTGAAGCGAGTTCCACTGGAGCAACCAGAAATGATTCCCTCCCAGAAGCAACTGGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481734.1
ENST00000493856.5
CDS CCA 90 bp AGGGATATACAAGGACCACTTTGTGAGTCTGCACAAAGCAGAGGCTaGATCTCTGGTTTCCCAGCTCCCCTGGAGGAGATGCGGGCGTCG +
Preference number: 5 (lower is better)
Translates to: RDIQGPLCESAQSRG*ISGFPAPLEEMRAS
Trigger: CGACGCCCGCATCTCCTCCAGGGGAGCTGGGAAACCAGAGATCCAGCCTCTGCTTTGTGCAGACTCACAAAGTGGTCCTTGTATATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490245.1
CDS-3UTR CAA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCAGTCTCTTCCTCCCCCTaGTGCTTCCTGGACATCAGG +
Preference number: 5 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPVSSSP*CFLDIR
Trigger: CCTGATGTCCAGGAAGCACAAGGGGGAGGAAGAGAC...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCGGTAACCTGGGCTGCTaGGGGCAGAAGAGCAAGTAC +
Preference number: 5 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPGNLGC*GQKSKY
Trigger: GTACTTGCTCTTCTGCCCCAAGCAGCCCAGGTTACC...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCTCTCGGACCTGGAAGTaGTGGCTGACACCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTSRTWK*WLTPSS
Trigger: AGAGCTGGGTGTCAGCCACAACTTCCAGGTCCGAGA...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTCTCGGACCTGGAAGTaGTGGCTGACACCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPSRTWK*WLTPSS
Trigger: AGAGCTGGGTGTCAGCCACAACTTCCAGGTCCGAGA...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp TGTATTGCACACAGCGCCGCAGCAGTTCTAAGGCGAGGTCGAACTTGCTGCCCTGTGCCACCGAACTCATaGATGGTGTCCTGCATGACC +
Preference number: 5 (lower is better)
Translates to: CIAHSAAAVLRRGRTCCPVPPNS*MVSCMT
Trigger: GGTCATGCAGGACACCATCAATGAGTTCGGTGGCAC...AGGGCAGCAAGTTCGACCTCGCCTTAGAACTGCTGCGGCGCTGTGTGCAATACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CAA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCACGTCCACATTGCCCTaGCTCAGGACCAAGTCCACG +
Preference number: 5 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTTSTLP*LRTKST
Trigger: CGTGGACTTGGTCCTGAGCAAGGGCAATGTGGACGT...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCAGCAGGACTTGTTGTATaGCACACAGCGCCGCAGCAG +
Preference number: 5 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPAGLVV*HTAPQQ
Trigger: CTGCTGCGGCGCTGTGTGCAATACAACAAGTCCTGC...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp GTTGGCGTGATGACTGTACTTCCAGGCCAGTTTGTAGTTGGTGACTGCATCCTTACTGGTCCAGGCCCCTaGACCCCAGCTAGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: VGVMTVLPGQFVVGDCILTGPGP*TPARAS
Trigger: TGAGGCCCTAGCTGGGGTCAAGGGGCCTGGACCAGT...AAGGATGCAGTCACCAACTACAAACTGGCCTGGAAGTACAGTCATCACGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CAA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTACTGGTCCAGGCCCCTaGACCCCAGCTAGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGTGPGP*TPARAS
Trigger: TGAGGCCCTAGCTGGGGTCAAGGGGCCTGGACCAGT...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAACTGGTCCAGGCCCCTaGACCCCAGCTAGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPTGPGP*TPARAS
Trigger: TGAGGCCCTAGCTGGGGTCAAGGGGCCTGGACCAGT...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp GCCAGCATAGTACAGTGCAGTCCCACTGACTGTCTTGCGTATTTCCTTCAGGCTGTGGGTCAGGCCTGGTaGAGCATGGTGGCACTCACC +
Preference number: 5 (lower is better)
Translates to: ASIVQCSPTDCLAYFLQAVGQAW*SMVALT
Trigger: GGTGAGTGCCACCATGCTCAACCAGGCCTGACCCAC...AGCCTGAAGGAAATACGCAAGACAGTCAGTGGGACTGCACTGTACTATGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS GCA 90 bp TTATCAGATGAGGGTGCTGGGGCCCTAGGAGAAGCCAAGAGATACTaGCCATCTGGGCTGAGCAGGGACATTCCAACAGCTCCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: LSDEGAGALGEAKRY*PSGLSRDIPTAPES
Trigger: AGACTCTGGAGCTGTTGGAATGTCCCTGCTCAGCCCAGATGGGCAGTATCTCTTGGCTTCTCCTAGGGCCCCAGCACCCTCATCTGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465962.1
CDS CCA 90 bp CTTCACATAAGCGTGCCCAATTCTGCTGGCCAGGGAGGCGTCATGTaGGTTCTGTCTATAGGCCTCATCATAGACCTCCAGGGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: LHISVPNSAGQGGVM*VLSIGLIIDLQGLL
Trigger: GAGAAGGCCCTGGAGGTCTATGATGAGGCCTATAGACAGAACCCACATGACGCCTCCCTGGCCAGCAGAATTGGGCACGCTTATGTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000471025.1
ENST00000683103.1
CDS CCA 90 bp CAACCTCGTTGTCTGGATTCAGACAGATCTGCACCATGTGGTAGATaGCGCTCTGGCCCCAAGTGCTGTCCTTGCGTGCCTTGTTCAGGA +
Preference number: 5 (lower is better)
Translates to: QPRCLDSDRSAPCGR*RSGPKCCPCVPCSG
Trigger: TCCTGAACAAGGCACGCAAGGACAGCACTTGGGGCCAGAGCGCCATCTACCACATGGTGCAGATCTGTCTGAATCCAGACAACGAGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000465962.1
ENST00000472866.6
ENST00000490245.1
ENST00000493856.5
ENST00000683103.1
CDS CCA 90 bp GGCTGCCAGTTGCTTCTGGGAGGGAATCATTTCTGGTTGCTCCAGTaGAACTCGCTTCAGTATCCGAGACTGGAGGTCCAAGGCCAGATG +
Preference number: 5 (lower is better)
Translates to: GCQLLLGGNHFWLLQ*NSLQYPRLEVQGQM
Trigger: CATCTGGCCTTGGACCTCCAGTCTCGGATACTGAAGCGAGTTCCACTGGAGCAACCAGAAATGATTCCCTCCCAGAAGCAACTGGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472866.6
CDS-3UTR CAA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCAAGGCGTTACAGTCCTaGGAAACCGAGCTGCTAGCC +
Preference number: 5 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPKALQS*ETELLA
Trigger: GGCTAGCAGCTCGGTTTCCAAGGACTGTAACGCCTT...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431162.6
CDS-3UTR CAA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGATAAGGGAGGAGTCATaGCTGCTCATCTCGGGCCGC +
Preference number: 5 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLIREES*LLISGR
Trigger: GCGGCCCGAGATGAGCAGCAATGACTCCTCCCTTAT...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCGGTCAATGTACTCTTaGGCCTTGTCATGGCGGCCT +
Preference number: 5 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTRSMYS*ALSWRP
Trigger: AGGCCGCCATGACAAGGCCAAAGAGTACATTGACCG...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp TTGTTGTATTGCACACAGCGCCGCAGCAGTTCTAAGGCGAGGTCGAACTTGCTGGGTAACCTGGGCTGCTaGGGGCAGAAGAGCAAGTAC +
Preference number: 5 (lower is better)
Translates to: LLYCTQRRSSSKARSNLLGNLGC*GQKSKY
Trigger: GTACTTGCTCTTCTGCCCCAAGCAGCCCAGGTTACC...CAGCAAGTTCGACCTCGCCTTAGAACTGCTGCGGCGCTGTGTGCAATACAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CAA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCAGGACCAAGTCCACGTaGGCAATGGTGATGCGGTTC +
Preference number: 5 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPRTKST*AMVMRF
Trigger: GAACCGCATCACCATTGCCAACGTGGACTTGGTCCT...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACGTCCACATTGCCCTaGCTCAGGACCAAGTCCACG +
Preference number: 5 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLTSTLP*LRTKST
Trigger: CGTGGACTTGGTCCTGAGCAAGGGCAATGTGGACGT...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp GTCGAACTTGCTGCCCTGGCAGTAAATGTCAGCCAGCAGGAGCCAGCTCTTCTCGATAGAGGCTGCCAGTaGCTTCTGGGAGGGAATCAT +
Preference number: 5 (lower is better)
Translates to: VELAALAVNVSQQEPALLDRGCQ*LLGGNH
Trigger: ATGATTCCCTCCCAGAAGCAACTGGCAGCCTCTATC...GAGAAGAGCTGGCTCCTGCTGGCTGACATTTACTGCCAGGGCAGCAAGTTCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CAA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGCCCCAAGTGCTGTCCTaGCGTGCCTTGTTCAGGAAC +
Preference number: 5 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLPQVLS*RALFRN
Trigger: GTTCCTGAACAAGGCACGCAAGGACAGCACTTGGGG...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTCAGGAACACGTAGGCTaGTGCCAAGGCCAGCAGGGC +
Preference number: 5 (lower is better)
Translates to: STDPLSIPPHNFSRLMASQEHVG*CQGQQG
Trigger: GCCCTGCTGGCCTTGGCACAAGCCTACGTGTTCCTG...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp AAGGCCAGCATAGTACAGTGCAGTCCCACTGACTGTCTTGCGTATTTCCTTCAGGCTTCTCGGTCTCCTTaGGCAGCCCTTGAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: KASIVQCSPTDCLAYFLQASRSP*AALEGL
Trigger: CAGCCCCTCAAGGGCTGCCAAAGGAGACCGAGAAGC...CTGAAGGAAATACGCAAGACAGTCAGTGGGACTGCACTGTACTATGCTGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS GCA 90 bp TTGCCTCAGTATACTGGTGGGCCTTCACATAAGCGTGCCCAATTCTaGTGGCCAGGGAGGCGTCATGTGGGTTCTGTCTATAGGCCTCAT +
Preference number: 5 (lower is better)
Translates to: LPQYTGGPSHKRAQF*WPGRRHVGSVYRPH
Trigger: ATGAGGCCTATAGACAGAACCCACATGACGCCTCCCTGGCCAGCAGAATTGGGCACGCTTATGTGAAGGCCCACCAGTATACTGAGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS GCA 90 bp CTAAACATCAGGTCAGCCATCAACACAGAAGCGGTCTCATGGTTCTaGTCAGTCTGCAGGAGGATGGCACAGTGCTGCTCACACAGGTCC +
Preference number: 5 (lower is better)
Translates to: LNIRSAINTEAVSWF*SVCRRMAQCCSHRS
Trigger: GGACCTGTGTGAGCAGCACTGTGCCATCCTCCTGCAGACTGAGCAGAACCATGAGACCGCTTCTGTGTTGATGGCTGACCTGATGTTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000472866.6
ENST00000493856.5
ENST00000683103.1
CDS GCA 90 bp TCAGACAGATCTGCACCATGTGGTAGATGGCGCTCTGGCCCCAAGTaGTGTCCTTGCGTGCCTTGTTCAGGAACTTTAAGGCTTCGTTGG +
Preference number: 5 (lower is better)
Translates to: SDRSAPCGRWRSGPK*CPCVPCSGTLRLRW
Trigger: CCAACGAAGCCTTAAAGTTCCTGAACAAGGCACGCAAGGACAGCACTTGGGGCCAGAGCGCCATCTACCACATGGTGCAGATCTGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000465962.1
ENST00000472866.6
ENST00000490245.1
ENST00000493856.5
ENST00000683103.1
CDS CCA 90 bp CCAGCTTTTCAAAGTACTCAGAGCCAAGAGGGATGCCTTGCATGCTaGAGAAGTGAAGCTCCACTGCCTCCTTCAGGAGCGCTGTGGTCT +
Preference number: 5 (lower is better)
Translates to: PAFQSTQSQEGCLAC*RSEAPLPPSGALWS
Trigger: AGACCACAGCGCTCCTGAAGGAGGCAGTGGAGCTTCACTTCTCCAGCATGCAAGGCATCCCTCTTGGCTCTGAGTACTTTGAAAAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS CCA 90 bp GCTCAGGACCAAGTCCACGTTGGCAATGGTGATGCGGTTCTCTTCTaGTGTGCCACCGAACTCATTGATGGTGTCCTGCATGACCTTGGT +
Preference number: 5 (lower is better)
Translates to: AQDQVHVGNGDAVLF*CATELIDGVLHDLG
Trigger: ACCAAGGTCATGCAGGACACCATCAATGAGTTCGGTGGCACACCAGAAGAGAACCGCATCACCATTGCCAACGTGGACTTGGTCCTGAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000466875.1
ENST00000683103.1
CDS CCA 90 bp CCTCAGTATACTGGTGGGCCTTCACATAAGCGTGCCCAATTCTGCTaGCCAGGGAGGCGTCATGTGGGTTCTGTCTATAGGCCTCATCAT +
Preference number: 5 (lower is better)
Translates to: PQYTGGPSHKRAQFC*PGRRHVGSVYRPHH
Trigger: ATGATGAGGCCTATAGACAGAACCCACATGACGCCTCCCTGGCCAGCAGAATTGGGCACGCTTATGTGAAGGCCCACCAGTATACTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000471025.1
ENST00000683103.1
CDS CCA 90 bp GGCTGCCAGTTGCTTCTGGGAGGGAATCATTTCTGGTTGCTCCAGTaGAACTCGCTTCAGTATCCGAGACTGGAGGTCCAAGGCCTTGTT +
Preference number: 5 (lower is better)
Translates to: GCQLLLGGNHFWLLQ*NSLQYPRLEVQGLV
Trigger: AACAAGGCCTTGGACCTCCAGTCTCGGATACTGAAGCGAGTTCCACTGGAGCAACCAGAAATGATTCCCTCCCAGAAGCAACTGGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS-3UTR CAA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCACCAGCCATGCCATCCTaGTCCAGTTTCATGGCTTCT +
Preference number: 5 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPPAMPS*SSFMAS
Trigger: AGAAGCCATGAAACTGGACAAGGATGGCATGGCTGG...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCGTCTCTTCCTCCCCCTaGTGCTTCCTGGACATCAGG +
Preference number: 5 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGVSSSP*CFLDIR
Trigger: CCTGATGTCCAGGAAGCACAAGGGGGAGGAAGAGAC...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp AGGGTTGGCGTGATGACTGTACTTCCAGGCCAGTTTGTAGTTGGTGACTGCATCGTGTCCTGCATGACCTaGGTGGCCTCATGTAGCTCC +
Preference number: 5 (lower is better)
Translates to: RVGVMTVLPGQFVVGDCIVSCMT*VASCSS
Trigger: GGAGCTACATGAGGCCACCAAGGTCATGCAGGACAC...GATGCAGTCACCAACTACAAACTGGCCTGGAAGTACAGTCATCACGCCAACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CAA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAAGCGCCACGTCCACATaGCCCTTGCTCAGGACCAAG +
Preference number: 5 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPSATST*PLLRTK
Trigger: CTTGGTCCTGAGCAAGGGCAATGTGGACGTGGCGCT...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTAGCGCCACGTCCACATaGCCCTTGCTCAGGACCAAG +
Preference number: 5 (lower is better)
Translates to: STDPLSIPPHNFSRLMASSATST*PLLRTK
Trigger: CTTGGTCCTGAGCAAGGGCAATGTGGACGTGGCGCT...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCAGATAGAGGCTGCCAGTaGCTTCTGGGAGGGAATCAT +
Preference number: 5 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPDRGCQ*LLGGNH
Trigger: ATGATTCCCTCCCAGAAGCAACTGGCAGCCTCTATC...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp AGGCCTTGTAGCAGGACTTGTTGTATTGCACACAGCGCCGCAGCAGTTCTAAGGCCGCCCACAACCTCGTaGTCTGGATTCAGACAGATC +
Preference number: 5 (lower is better)
Translates to: RPCSRTCCIAHSAAAVLRPPTTS*SGFRQI
Trigger: GATCTGTCTGAATCCAGACAACGAGGTTGTGGGCGG...CCTTAGAACTGCTGCGGCGCTGTGTGCAATACAACAAGTCCTGCTACAAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CAA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCGCAGGACTTGTTGTATaGCACACAGCGCCGCAGCAG +
Preference number: 5 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGAGLVV*HTAPQQ
Trigger: CTGCTGCGGCGCTGTGTGCAATACAACAAGTCCTGC...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTCCCTGAGGACATCGTaGCAGATTTCAATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPSLRTS*QISMAS
Trigger: GGAGGCCATTGAAATCTGCAACGATGTCCTCAGGGA...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS TCA 90 bp GAGACAGAAATCTCCAGGCTGAAATGCCCAGTAGCTGTTATCAGATaGGGGTGCTGGGGCCCTAGGAGAAGCCAAGAGATACTGCCCATC +
Preference number: 5 (lower is better)
Translates to: ETEISRLKCPVAVIR*GCWGPRRSQEILPI
Trigger: GATGGGCAGTATCTCTTGGCTTCTCCTAGGGCCCCAGCACCCTCATCTGATAACAGCTACTGGGCATTTCAGCCTGGAGATTTCTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465962.1
CDS GCA 90 bp GTCATGGCGGCCTATGAGCCAGAGGAAAAGGCCAGCATAGTACAGTaGAGTCCCACTGACTGTCTTGCGTATTTCCTTCAGGCTGTACTC +
Preference number: 5 (lower is better)
Translates to: VMAAYEPEEKASIVQ*SPTDCLAYFLQAVL
Trigger: GAGTACAGCCTGAAGGAAATACGCAAGACAGTCAGTGGGACTGCACTGTACTATGCTGGCCTTTTCCTCTGGCTCATAGGCCGCCATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000425163.5
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000459702.1
ENST00000479954.5
ENST00000683103.1
CDS GCA 90 bp TTTTCTAGGATTCTGTGTCCCATTTCTACTGTCTGCTCCCAGTCCTaGCGAGCTAAGAACAGCTGCATCTTCAGGACGAGGGCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: FSRILCPISTVCSQS*RAKNSCIFRTRAGR
Trigger: CCTGCCAGCCCTCGTCCTGAAGATGCAGCTGTTCTTAGCTCGGCAGGACTGGGAGCAGACAGTAGAAATGGGACACAGAATCCTAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000431559.5
ENST00000440121.1
ENST00000459702.1
ENST00000479954.5
ENST00000493337.5
ENST00000683103.1
CDS GCA 90 bp CAGATAGAGGCTGCCAGTTGCTTCTGGGAGGGAATCATTTCTGGTTaGTCCAGTGGAACTCGCTTCAGTATCCGAGACTGGAGGTCCAAG +
Preference number: 5 (lower is better)
Translates to: QIEAASCFWEGIISG*SSGTRFSIRDWRSK
Trigger: CTTGGACCTCCAGTCTCGGATACTGAAGCGAGTTCCACTGGAGCAACCAGAAATGATTCCCTCCCAGAAGCAACTGGCAGCCTCTATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000472866.6
ENST00000481734.1
ENST00000493856.5
ENST00000683103.1
CDS GCA 90 bp AATAGGCAAAGCCACTGGCTGAGTACACATGAGGCAAGCTGGCACTaGCTCTGGGGGCAGGAGCAGAAGCAAAGGACTCAAACAAAACAC +
Preference number: 5 (lower is better)
Translates to: NRQSHWLSTHEASWH*LWGQEQKQRTQTKH
Trigger: GTGTTTTGTTTGAGTCCTTTGCTTCTGCTCCTGCCCCCAGAGGCAGTGCCAGCTTGCCTCATGTGTACTCAGCCAGTGGCTTTGCCTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493856.5
CDS CCA 90 bp TTTGTGAGCATAAATGAGGGCCATGGTGGAGCACAGGGACACGTCTaGGTGATGCCTGATGCTTTCCAGGTCACTGATGGCATCCTGGAT +
Preference number: 5 (lower is better)
Translates to: FVSINEGHGGAQGHV*VMPDAFQVTDGILD
Trigger: ATCCAGGATGCCATCAGTGACCTGGAAAGCATCAGGCATCACCCAGACGTGTCCCTGTGCTCCACCATGGCCCTCATTTATGCTCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000425163.5
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000479954.5
ENST00000490036.5
ENST00000683103.1
CDS CCA 90 bp CCAGCACATCTTTGGTGTCCTGAATTCCTTGTTCCAGGTACTCAATaGCTTTCTTCGCAGTGTGGGGCTTGTCTGAGGTCAGGTCCACCC +
Preference number: 5 (lower is better)
Translates to: PAHLWCPEFLVPGTQ*LSSQCGACLRSGPP
Trigger: GGGTGGACCTGACCTCAGACAAGCCCCACACTGCGAAGAAAGCCATTGAGTACCTGGAACAAGGAATTCAGGACACCAAAGATGTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000479954.5
ENST00000683103.1
CDS CCA 90 bp GATGCAGATAGAGGCTGCCAGTTGCTTCTGGGAGGGAATCATTTCTaGTTGCTCCAGTGGAACTCGCTTCAGTATCCGAGACTGGAGGTC +
Preference number: 5 (lower is better)
Translates to: DADRGCQLLLGGNHF*LLQWNSLQYPRLEV
Trigger: GACCTCCAGTCTCGGATACTGAAGCGAGTTCCACTGGAGCAACCAGAAATGATTCCCTCCCAGAAGCAACTGGCAGCCTCTATCTGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000472866.6
ENST00000481734.1
ENST00000493856.5
ENST00000683103.1
CDS CCA 90 bp CAAAGCCACTGGCTGAGTACACATGAGGCAAGCTGGCACTGCCTCTaGGGGCAGGAGCAGAAGCAAAGGACTCAAACAAAACACGCTTTT +
Preference number: 5 (lower is better)
Translates to: QSHWLSTHEASWHCL*GQEQKQRTQTKHAF
Trigger: AAAAGCGTGTTTTGTTTGAGTCCTTTGCTTCTGCTCCTGCCCCCAGAGGCAGTGCCAGCTTGCCTCATGTGTACTCAGCCAGTGGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493856.5
CDS-3UTR CAA 90 bp AAGGCCAGCATAGTACAGTGCAGTCCCACTGACTGTCTTGCGTATTTCCTTCAGATAAGGGAGGAGTCATaGCTGCTCATCTCGGGCCGC +
Preference number: 5 (lower is better)
Translates to: KASIVQCSPTDCLAYFLQIREES*LLISGR
Trigger: GCGGCCCGAGATGAGCAGCAATGACTCCTCCCTTAT...CTGAAGGAAATACGCAAGACAGTCAGTGGGACTGCACTGTACTATGCTGGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS-3UTR CAA 90 bp TTTGGCCTTGTCATGGCGGCCTATGAGCCAGAGGAAAAGGCCAGCATAGTACAGATGTACTCTTTGGCCTaGTCATGGCGGCCTATGAGC +
Preference number: 5 (lower is better)
Translates to: FGLVMAAYEPEEKASIVQMYSLA*SWRPMS
Trigger: GCTCATAGGCCGCCATGACAAGGCCAAAGAGTACAT...CTGTACTATGCTGGCCTTTTCCTCTGGCTCATAGGCCGCCATGACAAGGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS-3UTR CAA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGATGTACTCTTTGGCCTaGTCATGGCGGCCTATGAGC +
Preference number: 5 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLMYSLA*SWRPMS
Trigger: GCTCATAGGCCGCCATGACAAGGCCAAAGAGTACAT...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp TGTATTGCACACAGCGCCGCAGCAGTTCTAAGGCGAGGTCGAACTTGCTGCCCTCAAGGCCTCTTTCACTaGGTTCTTCAGGATGAAGAG +
Preference number: 5 (lower is better)
Translates to: CIAHSAAAVLRRGRTCCPQGLFH*VLQDEE
Trigger: CTCTTCATCCTGAAGAACCAAGTGAAAGAGGCCTTG...AGGGCAGCAAGTTCGACCTCGCCTTAGAACTGCTGCGGCGCTGTGTGCAATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CAA 90 bp TCGGGGTGCTCCCTGAGGACATCGTTGCAGATTTCAATGGCCTCCACAAATTTCGCCAAGAGGGATGCCTaGCATGCTGGAGAAGTGAAG +
Preference number: 5 (lower is better)
Translates to: SGCSLRTSLQISMASTNFAKRDA*HAGEVK
Trigger: CTTCACTTCTCCAGCATGCAAGGCATCCCTCTTGGC...GAAATTTGTGGAGGCCATTGAAATCTGCAACGATGTCCTCAGGGAGCACCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CAA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGTAACCTGGGCTGCTaGGGGCAGAAGAGCAAGTAC +
Preference number: 5 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPGNLGC*GQKSKY
Trigger: GTACTTGCTCTTCTGCCCCAAGCAGCCCAGGTTACC...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp GTCGAACTTGCTGCCCTGGCAGTAAATGTCAGCCAGCAGGAGCCAGCTCTTCTCCAAGATCACGGCGACTaGTTTAAGAAGTGGAGACAC +
Preference number: 5 (lower is better)
Translates to: VELAALAVNVSQQEPALLQDHGD*FKKWRH
Trigger: GTGTCTCCACTTCTTAAACAAGTCGCCGTGATCTTG...GAGAAGAGCTGGCTCCTGCTGGCTGACATTTACTGCCAGGGCAGCAAGTTCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CAA 90 bp TATTGCACACAGCGCCGCAGCAGTTCTAAGGCGAGGTCGAACTTGCTGCCCTGGTTCAGAGCTGGCAATTaGATGACCATTTTCAGCGTC +
Preference number: 5 (lower is better)
Translates to: YCTQRRSSSKARSNLLPWFRAGN*MTIFSV
Trigger: GACGCTGAAAATGGTCATCAAATTGCCAGCTCTGAA...CCAGGGCAGCAAGTTCGACCTCGCCTTAGAACTGCTGCGGCGCTGTGTGCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CAA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCGTGCCACCGAACTCATaGATGGTGTCCTGCATGACC +
Preference number: 5 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGVPPNS*MVSCMT
Trigger: GGTCATGCAGGACACCATCAATGAGTTCGGTGGCAC...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp AGGGTTGGCGTGATGACTGTACTTCCAGGCCAGTTTGTAGTTGGTGACTGCATCAGGACCAAGTCCACGTaGGCAATGGTGATGCGGTTC +
Preference number: 5 (lower is better)
Translates to: RVGVMTVLPGQFVVGDCIRTKST*AMVMRF
Trigger: GAACCGCATCACCATTGCCAACGTGGACTTGGTCCT...GATGCAGTCACCAACTACAAACTGGCCTGGAAGTACAGTCATCACGCCAACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CAA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTAGCGCCACGTCCACATaGCCCTTGCTCAGGACCAAG +
Preference number: 5 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTSATST*PLLRTK
Trigger: CTTGGTCCTGAGCAAGGGCAATGTGGACGTGGCGCT...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp AGGCCTTGTAGCAGGACTTGTTGTATTGCACACAGCGCCGCAGCAGTTCTAAGGAACTTCAGGAGCAGTTaGCCCAGATCGCAGCACAGA +
Preference number: 5 (lower is better)
Translates to: RPCSRTCCIAHSAAAVLRNFRSS*PRSQHR
Trigger: TCTGTGCTGCGATCTGGGCAAACTGCTCCTGAAGTT...CCTTAGAACTGCTGCGGCGCTGTGTGCAATACAACAAGTCCTGCTACAAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CAA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCGGCTCTTGTAAACCTTaGCCAGCAAAAGCAGGCACT +
Preference number: 5 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPGSCKP*PAKAGT
Trigger: AGTGCCTGCTTTTGCTGGCAAAGGTTTACAAGAGCC...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp TATTGCACACAGCGCCGCAGCAGTTCTAAGGCGAGGTCGAACTTGCTGCCCTGGTGGAGGTCCAAGGCCTaGTTCAAAGTTTCTATCACA +
Preference number: 5 (lower is better)
Translates to: YCTQRRSSSKARSNLLPWWRSKA*FKVSIT
Trigger: TGTGATAGAAACTTTGAACAAGGCCTTGGACCTCCA...CCAGGGCAGCAAGTTCGACCTCGCCTTAGAACTGCTGCGGCGCTGTGTGCAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CAA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCAGGGAATCATTTCTGGTaGCTCCAGTGGAACTCGCTT +
Preference number: 5 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPGNHFW*LQWNSL
Trigger: AAGCGAGTTCCACTGGAGCAACCAGAAATGATTCCC...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCACGGCTAGACACCTTCTaGGCCAATTCAAAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPRLDTF*ANSKKA
Trigger: TGCCTTCTTTGAATTGGCCAAGAAGGTGTCTAGCCG...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCACCCCAAGTGCTGTCCTaGCGTGCCTTGTTCAGGAAC +
Preference number: 5 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPPQVLS*RALFRN
Trigger: GTTCCTGAACAAGGCACGCAAGGACAGCACTTGGGG...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCAACTGCATACGCGCCTaGGGGATCTGCTTCAGGAAC +
Preference number: 5 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGNCIRA*GICFRN
Trigger: GTTCCTGAAGCAGATCCCCAAGGCGCGTATGCAGTT...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGCAGGACTTGTTGTATaGCACACAGCGCCGCAGCAG +
Preference number: 5 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPAGLVV*HTAPQQ
Trigger: CTGCTGCGGCGCTGTGTGCAATACAACAAGTCCTGC...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS TCA 90 bp AGCACATGGCAGAGCCTAGAATCAATCTCACTGCCTGATGCTGCCTaGCTCCCAAGCTACACAACTCAAAGAGTCAAACCAGAGCAGGCC +
Preference number: 5 (lower is better)
Translates to: STWQSLESISLPDAA*LPSYTTQRVKPEQA
Trigger: GGCCTGCTCTGGTTTGACTCTTTGAGTTGTGTAGCTTGGGAGTCAGGCAGCATCAGGCAGTGAGATTGATTCTAGGCTCTGCCATGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459702.1
ENST00000479954.5
ENST00000493337.5
CDS GCA 90 bp AGACTGTACCGCCTTGTCATACTCTTTCTCTGCCAGGTAGTGCTCTaGAAATTGGATGCAGATAGAGGCTGCCAGTTGCTTCTGGGAGGG +
Preference number: 5 (lower is better)
Translates to: RLYRLVILFLCQVVL*KLDADRGCQLLLGG
Trigger: CCCTCCCAGAAGCAACTGGCAGCCTCTATCTGCATCCAATTTGCAGAGCACTACCTGGCAGAGAAAGAGTATGACAAGGCGGTACAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000472866.6
ENST00000481734.1
ENST00000493856.5
ENST00000683103.1
CDS GCA 90 bp CTGTCCTTGCGTGCCTTGTTCAGGAACTTTAAGGCTTCGTTGGGCTaGCCTATGTGCCTGTGGTGGAGAAAACACCAAGAATCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: LSLRALFRNFKASLG*PMCLWWRKHQESVR
Trigger: CCTCACTGATTCTTGGTGTTTTCTCCACCACAGGCACATAGGGCAGCCCAACGAAGCCTTAAAGTTCCTGAACAAGGCACGCAAGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490245.1
CDS CCA 90 bp CAGAGCTGGCAATTTGATGACCATTTTCAGCGTCTTTATGGCCTCTaGATAGTCTCCAGCCTTGTTGAGGGCCCTGGCCTTGATGAGGTG +
Preference number: 5 (lower is better)
Translates to: QSWQFDDHFQRLYGL*IVSSLVEGPGLDEV
Trigger: CACCTCATCAAGGCCAGGGCCCTCAACAAGGCTGGAGACTATCCAGAGGCCATAAAGACGCTGAAAATGGTCATCAAATTGCCAGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS CCA 90 bp ATCATTTCTGGTTGCTCCAGTGGAACTCGCTTCAGTATCCGAGACTaGAGGTCCAAGGCCAGATGTGGCTCCTCCACCTTGAACTTCTCA +
Preference number: 5 (lower is better)
Translates to: IISGCSSGTRFSIRD*RSKARCGSSTLNFS
Trigger: TGAGAAGTTCAAGGTGGAGGAGCCACATCTGGCCTTGGACCTCCAGTCTCGGATACTGAAGCGAGTTCCACTGGAGCAACCAGAAATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472866.6
CDS-3UTR CAA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTATAAGGGAGGAGTCATaGCTGCTCATCTCGGGCCGC +
Preference number: 5 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTIREES*LLISGR
Trigger: GCGGCCCGAGATGAGCAGCAATGACTCCTCCCTTAT...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCGTCCCACTGACTGTCTaGCGTATTTCCTTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGVPLTV*RISFRL
Trigger: CAGCCTGAAGGAAATACGCAAGACAGTCAGTGGGAC...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp AAGGCCAGCATAGTACAGTGCAGTCCCACTGACTGTCTTGCGTATTTCCTTCAGCGGTCAATGTACTCTTaGGCCTTGTCATGGCGGCCT +
Preference number: 5 (lower is better)
Translates to: KASIVQCSPTDCLAYFLQRSMYS*ALSWRP
Trigger: AGGCCGCCATGACAAGGCCAAAGAGTACATTGACCG...CTGAAGGAAATACGCAAGACAGTCAGTGGGACTGCACTGTACTATGCTGGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS-3UTR CAA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCACGGTCAATGTACTCTTaGGCCTTGTCATGGCGGCCT +
Preference number: 5 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPRSMYS*ALSWRP
Trigger: AGGCCGCCATGACAAGGCCAAAGAGTACATTGACCG...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGTGTCCTGCATGACCTaGGTGGCCTCATGTAGCTCC +
Preference number: 5 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTVSCMT*VASCSS
Trigger: GGAGCTACATGAGGCCACCAAGGTCATGCAGGACAC...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTGTGCCACCGAACTCATaGATGGTGTCCTGCATGACC +
Preference number: 5 (lower is better)
Translates to: STDPLSIPPHNFSRLMASVPPNS*MVSCMT
Trigger: GGTCATGCAGGACACCATCAATGAGTTCGGTGGCAC...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTAGGACCAAGTCCACGTaGGCAATGGTGATGCGGTTC +
Preference number: 5 (lower is better)
Translates to: STDPLSIPPHNFSRLMASRTKST*AMVMRF
Trigger: GAACCGCATCACCATTGCCAACGTGGACTTGGTCCT...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCACGCTTTCTCCAAGACTaGGTGGTAAAGATTGATGGC +
Preference number: 5 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPRFLQD*VVKIDG
Trigger: GCCATCAATCTTTACCACCAAGTCTTGGAGAAAGCG...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp AGCAAGTTTGAAGCCAATGGCAGGGTTGGCGTGATGACTGTACTTCCAGGCCAGCTGTCCTTGCGTGCCTaGTTCAGGAACTTTAAGGCT +
Preference number: 5 (lower is better)
Translates to: SKFEANGRVGVMTVLPGQLSLRA*FRNFKA
Trigger: AGCCTTAAAGTTCCTGAACAAGGCACGCAAGGACAG...CTGGCCTGGAAGTACAGTCATCACGCCAACCCTGCCATTGGCTTCAAACTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CAA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCACCGCCCACAACCTCGTaGTCTGGATTCAGACAGATC +
Preference number: 5 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPPPTTS*SGFRQI
Trigger: GATCTGTCTGAATCCAGACAACGAGGTTGTGGGCGG...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTAACTGCATACGCGCCTaGGGGATCTGCTTCAGGAAC +
Preference number: 5 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGNCIRA*GICFRN
Trigger: GTTCCTGAAGCAGATCCCCAAGGCGCGTATGCAGTT...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCACAACTTCAGTAGGTaGATGGCTTCTACTGGTCCA +
Preference number: 5 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTHNFSR*MASTGP
Trigger: TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTG...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp AAGGCCAGCATAGTACAGTGCAGTCCCACTGACTGTCTTGCGTATTTCCTTCAGCTCCTTTGGCAGCCCTaGAGGGGCTGTGTTATCTCT +
Preference number: 5 (lower is better)
Translates to: KASIVQCSPTDCLAYFLQLLWQP*RGCVIS
Trigger: AGAGATAACACAGCCCCTCAAGGGCTGCCAAAGGAG...CTGAAGGAAATACGCAAGACAGTCAGTGGGACTGCACTGTACTATGCTGGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS GCA 90 bp CGTGCCTTGTTCAGGAACTTTAAGGCTTCGTTGGGCTGCCCTATGTaGCTGTGGTGGAGAAAACACCAAGAATCAGTGAGGGAAACTGAG +
Preference number: 5 (lower is better)
Translates to: RALFRNFKASLGCPM*LWWRKHQESVRETE
Trigger: CTCAGTTTCCCTCACTGATTCTTGGTGTTTTCTCCACCACAGGCACATAGGGCAGCCCAACGAAGCCTTAAAGTTCCTGAACAAGGCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490245.1
CDS CCA 90 bp AGATGTTGGCCATCTTCTCTCTGGCTTCCATATAGCAGGACTGCTTaGGCAAGATGTTCCTTAGCATGTTCAGCGCCACGTCCACATTGC +
Preference number: 5 (lower is better)
Translates to: RCWPSSLWLPYSRTA*ARCSLACSAPRPHC
Trigger: GCAATGTGGACGTGGCGCTGAACATGCTAAGGAACATCTTGCCCAAGCAGTCCTGCTATATGGAAGCCAGAGAGAAGATGGCCAACATCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000466875.1
ENST00000471025.1
ENST00000683103.1
CDS CCA 90 bp CTGCCCTATGTGCCAGCAGTAGATACCTCTGCAGTAATTGAACCCTaGTTCCAAAGGCACCCGGCTAGACACCTTCTTGGCCAATTCAAA +
Preference number: 5 (lower is better)
Translates to: LPYVPAVDTSAVIEP*FQRHPARHLLGQFK
Trigger: TTTGAATTGGCCAAGAAGGTGTCTAGCCGGGTGCCTTTGGAACCAGGGTTCAATTACTGCAGAGGTATCTACTGCTGGCACATAGGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000465962.1
ENST00000472866.6
ENST00000493856.5
ENST00000683103.1
CDS CCA 90 bp AAGTGCTGTCCTTGCGTGCCTTGTTCAGGAACTTTAAGGCTTCGTTaGGCTGCCCTATGTGCCTGTGGTGGAGAAAACACCAAGAATCAG +
Preference number: 5 (lower is better)
Translates to: KCCPCVPCSGTLRLR*AALCACGGENTKNQ
Trigger: CTGATTCTTGGTGTTTTCTCCACCACAGGCACATAGGGCAGCCCAACGAAGCCTTAAAGTTCCTGAACAAGGCACGCAAGGACAGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490245.1
CDS-3UTR CAA 90 bp AAGGCCAGCATAGTACAGTGCAGTCCCACTGACTGTCTTGCGTATTTCCTTCAGGTCCCACTGACTGTCTaGCGTATTTCCTTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: KASIVQCSPTDCLAYFLQVPLTV*RISFRL
Trigger: CAGCCTGAAGGAAATACGCAAGACAGTCAGTGGGAC...CTGAAGGAAATACGCAAGACAGTCAGTGGGACTGCACTGTACTATGCTGGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS-3UTR CAA 90 bp AAGTTTGAAGCCAATGGCAGGGTTGGCGTGATGACTGTACTTCCAGGCCAGTTTGTCCCACTGACTGTCTaGCGTATTTCCTTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: KFEANGRVGVMTVLPGQFVPLTV*RISFRL
Trigger: CAGCCTGAAGGAAATACGCAAGACAGTCAGTGGGAC...AAACTGGCCTGGAAGTACAGTCATCACGCCAACCCTGCCATTGGCTTCAAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CAA 90 bp AAGTTTGAAGCCAATGGCAGGGTTGGCGTGATGACTGTACTTCCAGGCCAGTTTATGTACTCTTTGGCCTaGTCATGGCGGCCTATGAGC +
Preference number: 5 (lower is better)
Translates to: KFEANGRVGVMTVLPGQFMYSLA*SWRPMS
Trigger: GCTCATAGGCCGCCATGACAAGGCCAAAGAGTACAT...AAACTGGCCTGGAAGTACAGTCATCACGCCAACCCTGCCATTGGCTTCAAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CAA 90 bp AAGTTTGAAGCCAATGGCAGGGTTGGCGTGATGACTGTACTTCCAGGCCAGTTTCCAGCCATGCCATCCTaGTCCAGTTTCATGGCTTCT +
Preference number: 5 (lower is better)
Translates to: KFEANGRVGVMTVLPGQFPAMPS*SSFMAS
Trigger: AGAAGCCATGAAACTGGACAAGGATGGCATGGCTGG...AAACTGGCCTGGAAGTACAGTCATCACGCCAACCCTGCCATTGGCTTCAAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CAA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGCCAAGAGGGATGCCTaGCATGCTGGAGAAGTGAAG +
Preference number: 5 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTAKRDA*HAGEVK
Trigger: CTTCACTTCTCCAGCATGCAAGGCATCCCTCTTGGC...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp ATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGCAAGATCACGGCGACTaGTTTAAGAAGTGGAGACAC +
Preference number: 5 (lower is better)
Translates to: IPPHNFSRLMASTGPGPLQDHGD*FKKWRH
Trigger: GTGTCTCCACTTCTTAAACAAGTCGCCGTGATCTTG...CAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp TCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCCCTCATAATACTCAATaGCCTCAGTATACTGGTGGG +
Preference number: 5 (lower is better)
Translates to: SIPPHNFSRLMASTGPGPPHNTQ*PQYTGG
Trigger: CCCACCAGTATACTGAGGCAATTGAGTATTATGAGG...GGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAAACTTCAGGAGCAGTTaGCCCAGATCGCAGCACAGA +
Preference number: 5 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPNFRSS*PRSQHR
Trigger: TCTGTGCTGCGATCTGGGCAAACTGCTCCTGAAGTT...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTAACTTCAGGAGCAGTTaGCCCAGATCGCAGCACAGA +
Preference number: 5 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGNFRSS*PRSQHR
Trigger: TCTGTGCTGCGATCTGGGCAAACTGCTCCTGAAGTT...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGATAGAGGCTGCCAGTaGCTTCTGGGAGGGAATCAT +
Preference number: 5 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPDRGCQ*LLGGNH
Trigger: ATGATTCCCTCCCAGAAGCAACTGGCAGCCTCTATC...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCGTAGTGCTCTGCAAATaGGATGCAGATAGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGVVLCK*DADRGC
Trigger: GCAGCCTCTATCTGCATCCAATTTGCAGAGCACTAC...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp TGCATCCTTGTAGGACTGCTCCTTCTCCATGATGAAGCCCATGTACTCATAGGCAACTTTAAGGCTTCGTaGGGCTGCCCTATGTGCCAG +
Preference number: 5 (lower is better)
Translates to: CILVGLLLLHDEAHVLIGNFKAS*GCPMCQ
Trigger: CTGGCACATAGGGCAGCCCAACGAAGCCTTAAAGTT...GCCTATGAGTACATGGGCTTCATCATGGAGAAGGAGCAGTCCTACAAGGATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CAA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAAACTTTAAGGCTTCGTaGGGCTGCCCTATGTGCCAG +
Preference number: 5 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPNFKAS*GCPMCQ
Trigger: CTGGCACATAGGGCAGCCCAACGAAGCCTTAAAGTT...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCTGTCCTTGCGTGCCTaGTTCAGGAACTTTAAGGCT +
Preference number: 5 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGLSLRA*FRNFKA
Trigger: AGCCTTAAAGTTCCTGAACAAGGCACGCAAGGACAG...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTCCGCCCACAACCTCGTaGTCTGGATTCAGACAGATC +
Preference number: 5 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTPPTTS*SGFRQI
Trigger: GATCTGTCTGAATCCAGACAACGAGGTTGTGGGCGG...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp GCCAGCATAGTACAGTGCAGTCCCACTGACTGTCTTGCGTATTTCCTTCAGGCTACTCAAGCTCCTGAATaGCTTCTCGGTCTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: ASIVQCSPTDCLAYFLQATQAPE*LLGLLW
Trigger: CCAAAGGAGACCGAGAAGCAATTCAGGAGCTTGAGT...AGCCTGAAGGAAATACGCAAGACAGTCAGTGGGACTGCACTGTACTATGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS TCA 90 bp TATGTGCCTGTGGTGGAGAAAACACCAAGAATCAGTGAGGGAAACTaGGGCCCAGACAGGGCAGGGATATACAAGGACCACTTTGTGAGT +
Preference number: 5 (lower is better)
Translates to: YVPVVEKTPRISEGN*GPDRAGIYKDHFVS
Trigger: ACTCACAAAGTGGTCCTTGTATATCCCTGCCCTGTCTGGGCCTCAGTTTCCCTCACTGATTCTTGGTGTTTTCTCCACCACAGGCACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490245.1
CDS CCA 90 bp ATCATTTCTGGTTGCTCCAGTGGAACTCGCTTCAGTATCCGAGACTaGAGGTCCAAGGCCTCGAGAAACCAATCAAGCCAGGATCAGAAA +
Preference number: 5 (lower is better)
Translates to: IISGCSSGTRFSIRD*RSKASRNQSSQDQK
Trigger: TTTCTGATCCTGGCTTGATTGGTTTCTCGAGGCCTTGGACCTCCAGTCTCGGATACTGAAGCGAGTTCCACTGGAGCAACCAGAAATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481734.1
ENST00000493856.5
CDS-3UTR CAA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCTTCAACACAGGGTCATaGCTGAATTTTTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGFNTGS*LNFSRP
Trigger: GGGCCTGGAAAAATTCAGCAATGACCCTGTGTTGAA...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGTCCCACTGACTGTCTaGCGTATTTCCTTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTVPLTV*RISFRL
Trigger: CAGCCTGAAGGAAATACGCAAGACAGTCAGTGGGAC...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTATGTACTCTTTGGCCTaGTCATGGCGGCCTATGAGC +
Preference number: 5 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTMYSLA*SWRPMS
Trigger: GCTCATAGGCCGCCATGACAAGGCCAAAGAGTACAT...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTCCAGCCATGCCATCCTaGTCCAGTTTCATGGCTTCT +
Preference number: 5 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTPAMPS*SSFMAS
Trigger: AGAAGCCATGAAACTGGACAAGGATGGCATGGCTGG...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCAGAGCTGGTGCTGCTTaGACTACAGGATTCAAGATC +
Preference number: 5 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGRAGAA*TTGFKI
Trigger: GATCTTGAATCCTGTAGTCAAAGCAGCACCAGCTCT...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp TTGTTGTATTGCACACAGCGCCGCAGCAGTTCTAAGGCGAGGTCGAACTTGCTGCCTCATAATACTCAATaGCCTCAGTATACTGGTGGG +
Preference number: 5 (lower is better)
Translates to: LLYCTQRRSSSKARSNLLPHNTQ*PQYTGG
Trigger: CCCACCAGTATACTGAGGCAATTGAGTATTATGAGG...CAGCAAGTTCGACCTCGCCTTAGAACTGCTGCGGCGCTGTGTGCAATACAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CAA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCTCTTGTAAACCTTaGCCAGCAAAAGCAGGCACT +
Preference number: 5 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPGSCKP*PAKAGT
Trigger: AGTGCCTGCTTTTGCTGGCAAAGGTTTACAAGAGCC...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTGGGAATCATTTCTGGTaGCTCCAGTGGAACTCGCTT +
Preference number: 5 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGGNHFW*LQWNSL
Trigger: AAGCGAGTTCCACTGGAGCAACCAGAAATGATTCCC...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTGTAGTGCTCTGCAAATaGGATGCAGATAGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGVVLCK*DADRGC
Trigger: GCAGCCTCTATCTGCATCCAATTTGCAGAGCACTAC...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp TGTTGTATTGCACACAGCGCCGCAGCAGTTCTAAGGCGAGGTCGAACTTGCTGCTCACCTTATTGTCAGTaGGCAAGTAGGAGAAGACAT +
Preference number: 5 (lower is better)
Translates to: CCIAHSAAAVLRRGRTCCSPYCQ*ASRRRH
Trigger: ATGTCTTCTCCTACTTGCCAACTGACAATAAGGTGA...GCAGCAAGTTCGACCTCGCCTTAGAACTGCTGCGGCGCTGTGTGCAATACAACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CAA 90 bp CCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCTCACCTTATTGTCAGTaGGCAAGTAGGAGAAGACAT +
Preference number: 5 (lower is better)
Translates to: PPHNFSRLMASTGPGPLTSPYCQ*ASRRRH
Trigger: ATGTCTTCTCCTACTTGCCAACTGACAATAAGGTGA...GGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp CCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCCCCTTGACCCCATCACCTTATTGTCAGTaGGCAAGTAGGAGAAGACAT +
Preference number: 5 (lower is better)
Translates to: PHNFSRLMASTGPGPLTPSPYCQ*ASRRRH
Trigger: ATGTCTTCTCCTACTTGCCAACTGACAATAAGGTGA...TGGGGTCAAGGGGCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTCGGCTAGACACCTTCTaGGCCAATTCAAAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: STDPLSIPPHNFSRLMASRLDTF*ANSKKA
Trigger: TGCCTTCTTTGAATTGGCCAAGAAGGTGTCTAGCCG...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTAACTTTAAGGCTTCGTaGGGCTGCCCTATGTGCCAG +
Preference number: 5 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTNFKAS*GCPMCQ
Trigger: CTGGCACATAGGGCAGCCCAACGAAGCCTTAAAGTT...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTCTGTCCTTGCGTGCCTaGTTCAGGAACTTTAAGGCT +
Preference number: 5 (lower is better)
Translates to: STDPLSIPPHNFSRLMASLSLRA*FRNFKA
Trigger: AGCCTTAAAGTTCCTGAACAAGGCACGCAAGGACAG...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTTCCCTGAGGACATCGTaGCAGATTTCAATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTSLRTS*QISMAS
Trigger: GGAGGCCATTGAAATCTGCAACGATGTCCTCAGGGA...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS TCA 90 bp CCCTGTCAAACCAGCCATGCCATCCTTGTCCAGTTTCATGGCTTCTaGATACCACAGCAAGGCCTCTTTCACTTGGTTCTTCAGGATGAA +
Preference number: 5 (lower is better)
Translates to: PCQTSHAILVQFHGF*IPQQGLFHLVLQDE
Trigger: TTCATCCTGAAGAACCAAGTGAAAGAGGCCTTGCTGTGGTATTCAGAAGCCATGAAACTGGACAAGGATGGCATGGCTGGTTTGACAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS GCA 90 bp GAACTTCAACACAGGGTCATTGCTGAATTTTTCCAGGCCCACAGCTaGAGCCTGCTGCACATGGTGGAAGTACTTTTCCTGGCTATAGTA +
Preference number: 5 (lower is better)
Translates to: ELQHRVIAEFFQAHS*SLLHMVEVLFLAIV
Trigger: TACTATAGCCAGGAAAAGTACTTCCACCATGTGCAGCAGGCTGCAGCTGTGGGCCTGGAAAAATTCAGCAATGACCCTGTGTTGAAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000425163.5
ENST00000430597.6
ENST00000431162.6
ENST00000431559.5
ENST00000440121.1
ENST00000459702.1
ENST00000479954.5
ENST00000490036.5
ENST00000493337.5
ENST00000683103.1
CDS GCA 90 bp ATACCTGACCTGAGCCATCAAATACAGGGGGTCGATCAGAGCTGGTaGTGCTTTGACTACAGGATTCAAGATCACGGCGACTTGTTTAAG +
Preference number: 5 (lower is better)
Translates to: IPDLSHQIQGVDQSW*CFDYRIQDHGDLFK
Trigger: CTTAAACAAGTCGCCGTGATCTTGAATCCTGTAGTCAAAGCAGCACCAGCTCTGATCGACCCCCTGTATTTGATGGCTCAGGTCAGGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS CCA 90 bp GTAATACCTGACCTGAGCCATCAAATACAGGGGGTCGATCAGAGCTaGTGCTGCTTTGACTACAGGATTCAAGATCACGGCGACTTGTTT +
Preference number: 5 (lower is better)
Translates to: VIPDLSHQIQGVDQS*CCFDYRIQDHGDLF
Trigger: AAACAAGTCGCCGTGATCTTGAATCCTGTAGTCAAAGCAGCACCAGCTCTGATCGACCCCCTGTATTTGATGGCTCAGGTCAGGTATTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS-3UTR CAA 90 bp GAGGAAAAGGCCAGCATAGTACAGTGCAGTCCCACTGACTGTCTTGCGTATTTCTTCAACACAGGGTCATaGCTGAATTTTTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: EEKASIVQCSPTDCLAYFFNTGS*LNFSRP
Trigger: GGGCCTGGAAAAATTCAGCAATGACCCTGTGTTGAA...GAAATACGCAAGACAGTCAGTGGGACTGCACTGTACTATGCTGGCCTTTTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS-3UTR CAA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCACAAGGCCTCTTTCACTaGGTTCTTCAGGATGAAGAG +
Preference number: 5 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPQGLFH*VLQDEE
Trigger: CTCTTCATCCTGAAGAACCAAGTGAAAGAGGCCTTG...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCACAAGATCACGGCGACTaGTTTAAGAAGTGGAGACAC +
Preference number: 5 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPQDHGD*FKKWRH
Trigger: GTGTCTCCACTTCTTAAACAAGTCGCCGTGATCTTG...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAAGAGCTGGTGCTGCTTaGACTACAGGATTCAAGATC +
Preference number: 5 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPRAGAA*TTGFKI
Trigger: GATCTTGAATCCTGTAGTCAAAGCAGCACCAGCTCT...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCTTCAGAGCTGGCAATTaGATGACCATTTTCAGCGTC +
Preference number: 5 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGFRAGN*MTIFSV
Trigger: GACGCTGAAAATGGTCATCAAATTGCCAGCTCTGAA...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp GTTGCAGATTTCAATGGCCTCCACAAATTTCTTGTCCTTCAGGTAGTTGAAAGCACGTCCACATTGCCCTaGCTCAGGACCAAGTCCACG +
Preference number: 5 (lower is better)
Translates to: VADFNGLHKFLVLQVVESTSTLP*LRTKST
Trigger: CGTGGACTTGGTCCTGAGCAAGGGCAATGTGGACGT...GCTTTCAACTACCTGAAGGACAAGAAATTTGTGGAGGCCATTGAAATCTGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CAA 90 bp CTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCAGGCTGGAGGTCCAAGGCCTaGTTCAAAGTTTCTATCACA +
Preference number: 5 (lower is better)
Translates to: LSIPPHNFSRLMASTGPGWRSKA*FKVSIT
Trigger: TGTGATAGAAACTTTGAACAAGGCCTTGGACCTCCA...GCCTGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGGAATCATTTCTGGTaGCTCCAGTGGAACTCGCTT +
Preference number: 5 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTGNHFW*LQWNSL
Trigger: AAGCGAGTTCCACTGGAGCAACCAGAAATGATTCCC...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp TGCATCCTTGTAGGACTGCTCCTTCTCCATGATGAAGCCCATGTACTCATAGGCCGCTTTCTCCAAGACTaGGTGGTAAAGATTGATGGC +
Preference number: 5 (lower is better)
Translates to: CILVGLLLLHDEAHVLIGRFLQD*VVKIDG
Trigger: GCCATCAATCTTTACCACCAAGTCTTGGAGAAAGCG...GCCTATGAGTACATGGGCTTCATCATGGAGAAGGAGCAGTCCTACAAGGATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CAA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTCGCTTTCTCCAAGACTaGGTGGTAAAGATTGATGGC +
Preference number: 5 (lower is better)
Translates to: STDPLSIPPHNFSRLMASRFLQD*VVKIDG
Trigger: GCCATCAATCTTTACCACCAAGTCTTGGAGAAAGCG...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp GTGCTCCCTGAGGACATCGTTGCAGATTTCAATGGCCTCCACAAATTTCTTGTCCGGCTAGACACCTTCTaGGCCAATTCAAAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: VLPEDIVADFNGLHKFLVRLDTF*ANSKKA
Trigger: TGCCTTCTTTGAATTGGCCAAGAAGGTGTCTAGCCG...GACAAGAAATTTGTGGAGGCCATTGAAATCTGCAACGATGTCCTCAGGGAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CAA 90 bp GATGAAGCCCATGTACTCATAGGCCTTGTAGCAGGACTTGTTGTATTGCACACATCCCTGAGGACATCGTaGCAGATTTCAATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: DEAHVLIGLVAGLVVLHTSLRTS*QISMAS
Trigger: GGAGGCCATTGAAATCTGCAACGATGTCCTCAGGGA...TGTGTGCAATACAACAAGTCCTGCTACAAGGCCTATGAGTACATGGGCTTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS GCA 90 bp GAAGACATCCTTATAAGACTGTACCGCCTTGTCATACTCTTTCTCTaGCAGGTAGTGCTCTGCAAATTGGATGCAGATAGAGGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: EDILIRLYRLVILFL*QVVLCKLDADRGCQ
Trigger: CTGGCAGCCTCTATCTGCATCCAATTTGCAGAGCACTACCTGGCAGAGAAAGAGTATGACAAGGCGGTACAGTCTTATAAGGATGTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000472866.6
ENST00000481734.1
ENST00000493856.5
ENST00000683103.1
CDS CCA 90 bp CACAGAGGGCCTGAGGAACTTTCTGCCTTCTTCCTTCTTCAGAGCTaGCAATTTGATGACCATTTTCAGCGTCTTTATGGCCTCTGGATA +
Preference number: 5 (lower is better)
Translates to: HRGPEELSAFFLLQS*QFDDHFQRLYGLWI
Trigger: TATCCAGAGGCCATAAAGACGCTGAAAATGGTCATCAAATTGCCAGCTCTGAAGAAGGAAGAAGGCAGAAAGTTCCTCAGGCCCTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS-3UTR CAA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTTTCAACACAGGGTCATaGCTGAATTTTTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTFNTGS*LNFSRP
Trigger: GGGCCTGGAAAAATTCAGCAATGACCCTGTGTTGAA...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp CTGCTCCTTCTCCATGATGAAGCCCATGTACTCATAGGCCTTGTAGCAGGACTTTCATGTTTCCTTCTCTaGCAAGCTCATGCACGGTTA +
Preference number: 5 (lower is better)
Translates to: LLLLHDEAHVLIGLVAGLSCFLL*QAHARL
Trigger: TAACCGTGCATGAGCTTGCAAGAGAAGGAAACATGA...AAGTCCTGCTACAAGGCCTATGAGTACATGGGCTTCATCATGGAGAAGGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CAA 90 bp CCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTCCATCATGTTTCCTTCTCTaGCAAGCTCATGCACGGTTA +
Preference number: 5 (lower is better)
Translates to: PLSIPPHNFSRLMASTGPSCFLL*QAHARL
Trigger: TAACCGTGCATGAGCTTGCAAGAGAAGGAAACATGA...TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTTCATGTTTCCTTCTCTaGCAAGCTCATGCACGGTTA +
Preference number: 5 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGSCFLL*QAHARL
Trigger: TAACCGTGCATGAGCTTGCAAGAGAAGGAAACATGA...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTCAAGGCCTCTTTCACTaGGTTCTTCAGGATGAAGAG +
Preference number: 5 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTQGLFH*VLQDEE
Trigger: CTCTTCATCCTGAAGAACCAAGTGAAAGAGGCCTTG...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp TCCACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTTTCAGAGCTGGCAATTaGATGACCATTTTCAGCGTC +
Preference number: 5 (lower is better)
Translates to: STDPLSIPPHNFSRLMASFRAGN*MTIFSV
Trigger: GACGCTGAAAATGGTCATCAAATTGCCAGCTCTGAA...AGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp CTGAGGACATCGTTGCAGATTTCAATGGCCTCCACAAATTTCTTGTCCTTCAGGGGCTCTTGTAAACCTTaGCCAGCAAAAGCAGGCACT +
Preference number: 5 (lower is better)
Translates to: LRTSLQISMASTNFLSFRGSCKP*PAKAGT
Trigger: AGTGCCTGCTTTTGCTGGCAAAGGTTTACAAGAGCC...CCTGAAGGACAAGAAATTTGTGGAGGCCATTGAAATCTGCAACGATGTCCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CAA 90 bp GACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTGGTTGGAGGTCCAAGGCCTaGTTCAAAGTTTCTATCACA +
Preference number: 5 (lower is better)
Translates to: DPLSIPPHNFSRLMASTGWRSKA*FKVSIT
Trigger: TGTGATAGAAACTTTGAACAAGGCCTTGGACCTCCA...ACCAGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS-3UTR CAA 90 bp CTGAGGACATCGTTGCAGATTTCAATGGCCTCCACAAATTTCTTGTCCTTCAGGGTAGTGCTCTGCAAATaGGATGCAGATAGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: LRTSLQISMASTNFLSFRVVLCK*DADRGC
Trigger: GCAGCCTCTATCTGCATCCAATTTGCAGAGCACTAC...CCTGAAGGACAAGAAATTTGTGGAGGCCATTGAAATCTGCAACGATGTCCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS-3UTR CAA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTCACAACTTCAGTAGGTaGATGGCTTCTACTGGTCCA +
Preference number: 5 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTHNFSR*MASTGP
Trigger: TGGACCAGTAGAAGCCATCAACCTACTGAAGTTGTG...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS CCA 90 bp AAACCTTCCTGTCCAACACATGAAAGGTTAGAAAGGTTAGGCAATTaGTCTGAGGTCACCCAGCCACCTAGGTCACTGACAGATTCCAAA +
Preference number: 5 (lower is better)
Translates to: KPSCPTHERLERLGN*SEVTQPPRSLTDSK
Trigger: TTTGGAATCTGTCAGTGACCTAGGTGGCTGGGTGACCTCAGACCAATTGCCTAACCTTTCTAACCTTTCATGTGTTGGACAGGAAGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459702.1
ENST00000479954.5
ENST00000493337.5
CDS-3UTR CAA 90 bp ACTGACCCACTTTCCATCCCTCCACACAACTTCAGTAGGTTGATGGCTTCTACTCCTCATAATACTCAATaGCCTCAGTATACTGGTGGG +
Preference number: 5 (lower is better)
Translates to: TDPLSIPPHNFSRLMASTPHNTQ*PQYTGG
Trigger: CCCACCAGTATACTGAGGCAATTGAGTATTATGAGG...AGTAGAAGCCATCAACCTACTGAAGTTGTGTGGAGGGATGGAAAGTGGGTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000440121.1
CDS TCA 90 bp TGGTGGCCTCATGCTAAAACATGGGAATCAAACAGACCCTTCACTTaGTGCACAAGTAAACAGTGGGTGGAATCAAAGAACCTGGTTCCT +
Preference number: 5 (lower is better)
Translates to: WWPHAKTWESNRPFT*CTSKQWVESKNLVP
Trigger: AGGAACCAGGTTCTTTGATTCCACCCACTGTTTACTTGTGCATCAAGTGAAGGGTCTGTTTGATTCCCATGTTTTAGCATGAGGCCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466875.1
CDS-3UTR CAA 90 bp TCATGTTTCCTTCTCTTGCAAGCTCATGCACGGTTAGAATTTGGCAGGCATCAATTCAACACAGGGTCATaGCTGAATTTTTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: SCFLLLQAHARLEFGRHQFNTGS*LNFSRP
Trigger: GGGCCTGGAAAAATTCAGCAATGACCCTGTGTTGAA...TTGATGCCTGCCAAATTCTAACCGTGCATGAGCTTGCAAGAGAAGGAAACATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431559.5
CDS-3UTR CAA 90 bp GTTGCAGATTTCAATGGCCTCCACAAATTTCTTGTCCTTCAGGTAGTTGAAAGCTTCAACACAGGGTCATaGCTGAATTTTTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: VADFNGLHKFLVLQVVESFNTGS*LNFSRP
Trigger: GGGCCTGGAAAAATTCAGCAATGACCCTGTGTTGAA...GCTTTCAACTACCTGAAGGACAAGAAATTTGTGGAGGCCATTGAAATCTGCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS TCA 90 bp GGTCATGAAGGGTTCCTCCTTGATTCTGTTTCAAGGATCACCTTCTaGGTCTTCAAAGAACTTACTGTGGTCATGTTTCCTTCTCTTGCA +
Preference number: 5 (lower is better)
Translates to: GHEGFLLDSVSRITF*VFKELTVVMFPSLA
Trigger: TGCAAGAGAAGGAAACATGACCACAGTAAGTTCTTTGAAGACTCAGAAGGTGATCCTTGAAACAGAATCAAGGAGGAACCCTTCATGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459702.1
ENST00000479954.5
ENST00000493337.5
CDS CCA 90 bp GGACTGTTCCAAACTCTCCCACTTCTTATCACATTTAGTCCTGTGTaGAATTCTGTCTATTTTACAAACAGGAAGCCTGCGGCTTATCCA +
Preference number: 5 (lower is better)
Translates to: GLFQTLPLLITFSPV*NSVYFTNRKPAAYP
Trigger: TGGATAAGCCGCAGGCTTCCTGTTTGTAAAATAGACAGAATTCCACACAGGACTAAATGTGATAAGAAGTGGGAGAGTTTGGAACAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459702.1
ENST00000479954.5
ENST00000493337.5
CDS CCA 90 bp CTATTTTTGGTTTCTTTGGAAAACTACAAGACTTACGAGCATGTTTaGGGCCCAGTATTACCTGGCCAATGCCTGAGCAGTTCCAACTAT +
Preference number: 5 (lower is better)
Translates to: LFLVSLENYKTYEHV*GPVLPGQCLSSSNY
Trigger: ATAGTTGGAACTGCTCAGGCATTGGCCAGGTAATACTGGGCCCCAAACATGCTCGTAAGTCTTGTAGTTTTCCAAAGAAACCAAAAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459702.1
ENST00000479954.5
ENST00000493337.5
CDS-3UTR CAA 90 bp TGCCTTAATCAGATTTCTAACGTGATTGGTAGCTGTGGTCATGTTTCCTTCTCTTCATGTTTCCTTCTCTaGCAAGCTCATGCACGGTTA +
Preference number: 5 (lower is better)
Translates to: CLNQISNVIGSCGHVSFSSCFLL*QAHARL
Trigger: TAACCGTGCATGAGCTTGCAAGAGAAGGAAACATGA...AGAGAAGGAAACATGACCACAGCTACCAATCACGTTAGAAATCTGATTAAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431559.5
CDS TCA 90 bp AGCAGCAAACTAACTAGTGCTGGCCCAGAAGCCTCTGCTCCATTTTaGCATGAATCAAATGTAAGTCAGTATAACTATTCGAACTTTCCA +
Preference number: 5 (lower is better)
Translates to: SSKLTSAGPEASAPF*HESNVSQYNYSNFP
Trigger: TGGAAAGTTCGAATAGTTATACTGACTTACATTTGATTCATGTCAAAATGGAGCAGAGGCTTCTGGGCCAGCACTAGTTAGTTTGCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459702.1
ENST00000479954.5
ENST00000493337.5
CDS GCA 90 bp TTCAAAGAACTTACTGTGGTCATGTTTCCTTCTCTTGCAAGCTCATaGACGGTTAGAATTTGGCAGGCATCAATATTGCTCTCATCTTTT +
Preference number: 5 (lower is better)
Translates to: FKELTVVMFPSLASS*TVRIWQASILLSSF
Trigger: AAAAGATGAGAGCAATATTGATGCCTGCCAAATTCTAACCGTGCATGAGCTTGCAAGAGAAGGAAACATGACCACAGTAAGTTCTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000431162.6
ENST00000459702.1
ENST00000479954.5
ENST00000493337.5
CDS TCA 90 bp TCCTCCACCTTGAACTTCTCAGCCTCTAGAACTGTAGAAAATGTATaGATTACCCAGTTTCAAGTATTCTGGTATACACCAACAGAATAC +
Preference number: 5 (lower is better)
Translates to: SSTLNFSASRTVENV*ITQFQVFWYTPTEY
Trigger: GTATTCTGTTGGTGTATACCAGAATACTTGAAACTGGGTAATTCATACATTTTCTACAGTTCTAGAGGCTGAGAAGTTCAAGGTGGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472866.6
CDS GCA 72 bp CCGCTCGCGGCTCCGAGTCCGGGTCTGGTGGGGCGGTaGAGAGCGGGATTCCCGAGGCAGGGTCGTGGGCAC +
Preference number: 6 (lower is better)
Translates to: PLAAPSPGLVGR*RAGFPRQGRGH
Trigger: GTGCCCACGACCCTGCCTCGGGAATCCCGCTCTGCACCGCCCCACCAGACCCGGACTCGGAGCCGCGAGCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000431559.5
ENST00000459702.1
ENST00000479954.5
ENST00000490036.5
ENST00000493337.5
ENST00000683103.1
CDS CCA 72 bp ATCTCGGGCCGCTCGCGGCTCCGAGTCCGGGTCTGGTaGGGCGGTGCAGAGCGGGATTCCCGAGGCAGGGTC +
Preference number: 6 (lower is better)
Translates to: ISGRSRLRVRVW*GGAERDSRGRV
Trigger: GACCCTGCCTCGGGAATCCCGCTCTGCACCGCCCCACCAGACCCGGACTCGGAGCCGCGAGCGGCCCGAGAT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000431559.5
ENST00000459702.1
ENST00000479954.5
ENST00000490036.5
ENST00000493337.5
ENST00000683103.1
CDS CCA 72 bp CTCATCTCGGGCCGCTCGCGGCTCCGAGTCCGGGTCTaGTGGGGCGGTGCAGAGCGGGATTCCCGAGGCAGG +
Preference number: 6 (lower is better)
Translates to: LISGRSRLRVRV*WGGAERDSRGR
Trigger: CCTGCCTCGGGAATCCCGCTCTGCACCGCCCCACCAGACCCGGACTCGGAGCCGCGAGCGGCCCGAGATGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000431559.5
ENST00000459702.1
ENST00000479954.5
ENST00000490036.5
ENST00000493337.5
ENST00000683103.1
CDS CCA 72 bp AGGGACCCTGGGAAGGGAGGAAGGGAGGGGAGGGAGTaGGTGCTGGGGGCTTCCTACCACAGAAGCGGTCTC +
Preference number: 6 (lower is better)
Translates to: RDPGKGGREGRE*VLGASYHRSGL
Trigger: GAGACCGCTTCTGTGGTAGGAAGCCCCCAGCACCCACTCCCTCCCCTCCCTTCCTCCCTTCCCAGGGTCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473587.1
ENST00000481734.1
CDS GCA 72 bp ACCCTGGGAAGGGAGGAAGGGAGGGGAGGGAGTGGGTaGTGGGGGCTTCCTACCACAGAAGCGGTCTCATGG +
Preference number: 6 (lower is better)
Translates to: TLGREEGRGGSG*WGLPTTEAVSW
Trigger: CCATGAGACCGCTTCTGTGGTAGGAAGCCCCCAGCACCCACTCCCTCCCCTCCCTTCCTCCCTTCCCAGGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473587.1
ENST00000481734.1
CDS CAA 90 bp GGGATTCCCGAGGCAGGGTCGTGGGCACTCTATCGCGGCGGGCGGTaGAAGGCGTTACAGTCCTTGGAAACCGAGCTGCTAGCCGGTTGC +
Preference number: 6 (lower is better)
Translates to: GIPEAGSWALYRGGR*KALQSLETELLAGC
Trigger: GCAACCGGCTAGCAGCTCGGTTTCCAAGGACTGTAACGCCTTCAACCGCCCGCCGCGATAGAGTGCCCACGACCCTGCCTCGGGAATCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683103.1
CDS GCA 72 bp GCATCCACGGAGGCGGGGTCCAGCTCCAGGCAACGCTaGAGGATGCTCTGGGCATTCTCTAGCTCTCCTGAG +
Preference number: 6 (lower is better)
Translates to: ASTEAGSSSRQR*RMLWAFSSSPE
Trigger: CTCAGGAGAGCTAGAGAATGCCCAGAGCATCCTGCAGCGTTGCCTGGAGCTGGACCCCGCCTCCGTGGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430597.6
ENST00000440121.1
ENST00000683103.1
CDS CCA 72 bp CTGGGAAGGGAGGAAGGGAGGGGAGGGAGTGGGTGCTaGGGGCTTCCTACCACAGAAGCGGTCTCATGGTTC +
Preference number: 6 (lower is better)
Translates to: LGREEGRGGSGC*GLPTTEAVSWF
Trigger: GAACCATGAGACCGCTTCTGTGGTAGGAAGCCCCCAGCACCCACTCCCTCCCCTCCCTTCCTCCCTTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473587.1
ENST00000481734.1
CDS GCA 72 bp CGCCTTGGGGATCTGCTTCAGGAACACGTAGGCTTGTaGCAAGGCCAGCAGGGCAGGGACGCTGTCCTTCTC +
Preference number: 6 (lower is better)
Translates to: RLGDLLQEHVGL*QGQQGRDAVLL
Trigger: GAGAAGGACAGCGTCCCTGCCCTGCTGGCCTTGGCACAAGCCTACGTGTTCCTGAAGCAGATCCCCAAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431162.6
ENST00000440121.1
ENST00000472866.6
ENST00000490245.1
ENST00000493856.5
ENST00000683103.1
CDS GCA 72 bp CGCCTTGGGGATCTGCTTCAGGAACACGTAGGCTTGTaGCAAGGCCAGCAGGGCAGGGACGCTGTCCTTGCA +
Preference number: 6 (lower is better)
Translates to: RLGDLLQEHVGL*QGQQGRDAVLA
Trigger: TGCAAGGACAGCGTCCCTGCCCTGCTGGCCTTGGCACAAGCCTACGTGTTCCTGAAGCAGATCCCCAAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430597.6
CDS GCA 72 bp GCCAGCCTACCGCTTCCGGCTAAAGGGCAGAGTAGGTaGAGCACTGAGTCCTCTCTGCCCGACAGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: ASLPLPAKGQSR*STESSLPDSSS
Trigger: TGAGGAGCTGTCGGGCAGAGAGGACTCAGTGCTGCACCTACTCTGCCCTTTAGCCGGAAGCGGTAGGCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473587.1
ENST00000481734.1
CDS CAA 72 bp GAGGCAGGGTCGTGGGCACTCTATCGCGGCGGGCGGTaGAAGGCGTTACAGTCCTTGGAAACCGAGCTGCTA +
Preference number: 6 (lower is better)
Translates to: EAGSWALYRGGR*KALQSLETELL
Trigger: TAGCAGCTCGGTTTCCAAGGACTGTAACGCCTTCAACCGCCCGCCGCGATAGAGTGCCCACGACCCTGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431162.6
ENST00000683103.1
CDS GCA 72 bp CACCTTAGACTGGCCCAGGAGATTGATGCTGCCCACTaGCAGCCAGCCTACCGCTTCCGGCTAAAGGGCAGA +
Preference number: 6 (lower is better)
Translates to: HLRLAQEIDAAH*QPAYRFRLKGR
Trigger: TCTGCCCTTTAGCCGGAAGCGGTAGGCTGGCTGGCAGTGGGCAGCATCAATCTCCTGGGCCAGTCTAAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473587.1
ENST00000481734.1
CDS GCA 72 bp CCGCCATCCCGCAGCCCTAGTGTGTGTGTGGCTCCTTaGCTTGTTGTATTGCACACAGCGCCGCAGCAGTTC +
Preference number: 6 (lower is better)
Translates to: PPSRSPSVCVAP*LVVLHTAPQQF
Trigger: GAACTGCTGCGGCGCTGTGTGCAATACAACAAGGCAAGGAGCCACACACACACTAGGGCTGCGGGATGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490245.1
CDS CCA 72 bp GGGTGCTGGGGGCTTCCTACCACAGAAGCGGTCTCATaGTTCTGCTCAGTCTGCAGGAGGATGGCACAGTGC +
Preference number: 6 (lower is better)
Translates to: GCWGLPTTEAVS*FCSVCRRMAQC
Trigger: GCACTGTGCCATCCTCCTGCAGACTGAGCAGAACCATGAGACCGCTTCTGTGGTAGGAAGCCCCCAGCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473587.1
ENST00000481734.1
CDS CAA 90 bp CCTTTCCGCCATCCCGCAGCCCTAGTGTGTGTGTGGCTCCTTGCCTaGTTGTATTGCACACAGCGCCGCAGCAGTTCTAAGGCGAGGTCG +
Preference number: 6 (lower is better)
Translates to: PFRHPAALVCVWLLA*LYCTQRRSSSKARS
Trigger: CGACCTCGCCTTAGAACTGCTGCGGCGCTGTGTGCAATACAACAAGGCAAGGAGCCACACACACACTAGGGCTGCGGGATGGCGGAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490245.1
CDS TCA 72 bp ACAGCCACCAGGGCACATACCTCCTTTGGCAGCCCTTaGGGGGCTGTGTTATCTCTGGGGCAGGGCTTTCCT +
Preference number: 6 (lower is better)
Translates to: TATRAHTSFGSP*GAVLSLGQGFP
Trigger: AGGAAAGCCCTGCCCCAGAGATAACACAGCCCCTCAAGGGCTGCCAAAGGAGGTATGTGCCCTGGTGGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490036.5
CDS GCA 72 bp ACTGTCTGCTCCCAGTCCTGCCGAGCTAAGAACAGCTaGATCTTCAGGACGAGGGCTGGCAGGAAGCTCCCT +
Preference number: 6 (lower is better)
Translates to: TVCSQSCRAKNS*IFRTRAGRKLP
Trigger: AGGGAGCTTCCTGCCAGCCCTCGTCCTGAAGATGCAGCTGTTCTTAGCTCGGCAGGACTGGGAGCAGACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000431559.5
ENST00000440121.1
ENST00000459702.1
ENST00000479954.5
ENST00000493337.5
ENST00000683103.1
CDS GCA 72 bp AGGGATGCCTTGCATGCTGGAGAAGTGAAGCTCCACTaGCTCCTTCAGGAGCGCTGTGGTCTCTTCCTCCCC +
Preference number: 6 (lower is better)
Translates to: RDALHAGEVKLH*LLQERCGLFLP
Trigger: GGGGAGGAAGAGACCACAGCGCTCCTGAAGGAGGCAGTGGAGCTTCACTTCTCCAGCATGCAAGGCATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS CCA 72 bp AAGCGGTCTCATGGTTCTGCTCAGTCTGCAGGAGGATaGCACAGTGCTGCTCACACAGGTCCAGGTGCCCCT +
Preference number: 6 (lower is better)
Translates to: KRSHGSAQSAGG*HSAAHTGPGAP
Trigger: AGGGGCACCTGGACCTGTGTGAGCAGCACTGTGCCATCCTCCTGCAGACTGAGCAGAACCATGAGACCGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000472866.6
ENST00000473587.1
ENST00000481734.1
ENST00000493856.5
ENST00000683103.1
CDS CCA 72 bp GGGTCTTGGCCAGGCGCTTCAACTGCATACGCGCCTTaGGGATCTGCTTCAGGAACACGTAGGCTTGTGCCA +
Preference number: 6 (lower is better)
Translates to: GSWPGASTAYAP*GSASGTRRLVP
Trigger: TGGCACAAGCCTACGTGTTCCTGAAGCAGATCCCCAAGGCGCGTATGCAGTTGAAGCGCCTGGCCAAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000472866.6
ENST00000490245.1
ENST00000493856.5
ENST00000683103.1
CDS CAA 72 bp AATCAACCTCACCCCACCTTAGACTGGCCCAGGAGATaGATGCTGCCCACTGCCAGCCAGCCTACCGCTTCC +
Preference number: 6 (lower is better)
Translates to: NQPHPTLDWPRR*MLPTASQPTAS
Trigger: GGAAGCGGTAGGCTGGCTGGCAGTGGGCAGCATCAATCTCCTGGGCCAGTCTAAGGTGGGGTGAGGTTGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473587.1
ENST00000481734.1
CDS CAA 72 bp CCCGCAGCCCTAGTGTGTGTGTGGCTCCTTGCCTTGTaGTATTGCACACAGCGCCGCAGCAGTTCTAAGGCG +
Preference number: 6 (lower is better)
Translates to: PAALVCVWLLAL*YCTQRRSSSKA
Trigger: CGCCTTAGAACTGCTGCGGCGCTGTGTGCAATACAACAAGGCAAGGAGCCACACACACACTAGGGCTGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490245.1
CDS CAA 72 bp ACAGCATCTGCACAGCCACCAGGGCACATACCTCCTTaGGCAGCCCTTGAGGGGCTGTGTTATCTCTGGGGC +
Preference number: 6 (lower is better)
Translates to: TASAQPPGHIPP*AALEGLCYLWG
Trigger: GCCCCAGAGATAACACAGCCCCTCAAGGGCTGCCAAAGGAGGTATGTGCCCTGGTGGCTGTGCAGATGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490036.5
CDS CAA 90 bp TTCCGCCATCCCGCAGCCCTAGTGTGTGTGTGGCTCCTTGCCTTGTaGTATTGCACACAGCGCCGCAGCAGTTCTAAGGCGAGGTCGAAC +
Preference number: 6 (lower is better)
Translates to: FRHPAALVCVWLLAL*YCTQRRSSSKARSN
Trigger: GTTCGACCTCGCCTTAGAACTGCTGCGGCGCTGTGTGCAATACAACAAGGCAAGGAGCCACACACACACTAGGGCTGCGGGATGGCGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490245.1
CDS CAA 90 bp CACTGGTTAACAGCATCTGCACAGCCACCAGGGCACATACCTCCTTaGGCAGCCCTTGAGGGGCTGTGTTATCTCTGGGGCAGGGCTTTC +
Preference number: 6 (lower is better)
Translates to: HWLTASAQPPGHIPP*AALEGLCYLWGRAF
Trigger: GAAAGCCCTGCCCCAGAGATAACACAGCCCCTCAAGGGCTGCCAAAGGAGGTATGTGCCCTGGTGGCTGTGCAGATGCTGTTAACCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490036.5
CDS TCA 72 bp ATGAGGGCCATGGTGGAGCACAGGGACACGTCTGGGTaGTGCCTGATGCTTTCCAGGTCACTGATGGCATCC +
Preference number: 6 (lower is better)
Translates to: MRAMVEHRDTSG*CLMLSRSLMAS
Trigger: GGATGCCATCAGTGACCTGGAAAGCATCAGGCATCACCCAGACGTGTCCCTGTGCTCCACCATGGCCCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000425163.5
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000479954.5
ENST00000490036.5
ENST00000683103.1
CDS TCA 72 bp TGCCAAAGTTGCCCTGAGCCAAGTAGATCTGACACATaGGGAGATGGGCATCCACGGAGGCGGGGTCCAGCT +
Preference number: 6 (lower is better)
Translates to: CQSCPEPSRSDT*GDGHPRRRGPA
Trigger: AGCTGGACCCCGCCTCCGTGGATGCCCATCTCCTCATGTGTCAGATCTACTTGGCTCAGGGCAACTTTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS GCA 72 bp CCTACCACAGAAGCGGTCTCATGGTTCTGCTCAGTCTaGAGGAGGATGGCACAGTGCTGCTCACACAGGTCC +
Preference number: 6 (lower is better)
Translates to: PTTEAVSWFCSV*RRMAQCCSHRS
Trigger: GGACCTGTGTGAGCAGCACTGTGCCATCCTCCTGCAGACTGAGCAGAACCATGAGACCGCTTCTGTGGTAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473587.1
ENST00000481734.1
CDS GCA 72 bp GCCTACAGGGGAAGCCTCTCCACCCATTCTGAGAACTaGCAGGCAATAGAGGTAGGGATGAGGACCCCTCCT +
Preference number: 6 (lower is better)
Translates to: AYRGSLSTHSEN*QAIEVGMRTPP
Trigger: AGGAGGGGTCCTCATCCCTACCTCTATTGCCTGGCAGTTCTCAGAATGGGTGGAGAGGCTTCCCCTGTAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481734.1
CDS CCA 72 bp AGGGCCTCCACCAGTTCCAATAAGATGGATGCCCGCTaGCTAGGCTGCACAGAGGGCCTGAGGAACTTTCTG +
Preference number: 6 (lower is better)
Translates to: RASTSSNKMDAR*LGCTEGLRNFL
Trigger: CAGAAAGTTCCTCAGGCCCTCTGTGCAGCCTAGCCAGCGGGCATCCATCTTATTGGAACTGGTGGAGGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000466875.1
ENST00000683103.1
CDS CCA 72 bp CCAGAATGCTCATTAAGGCATCGCCCAGTAGCAGGCTaGTGTGGGGGCCAGGCAGATGTTCACAGAGCTCAC +
Preference number: 6 (lower is better)
Translates to: PECSLRHRPVAG*CGGQADVHRAH
Trigger: GTGAGCTCTGTGAACATCTGCCTGGCCCCCACACCAGCCTGCTACTGGGCGATGCCTTAATGAGCATTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000466875.1
ENST00000471025.1
ENST00000683103.1
CDS CCA 72 bp TGGGGCCCTAGGAGAAGCCAAGAGATACTGCCCATCTaGGCTGAGCAGGGACATTCCAACAGCTCCAGAGTC +
Preference number: 6 (lower is better)
Translates to: WGPRRSQEILPI*AEQGHSNSSRV
Trigger: GACTCTGGAGCTGTTGGAATGTCCCTGCTCAGCCCAGATGGGCAGTATCTCTTGGCTTCTCCTAGGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465962.1
CDS CCA 72 bp GGTTGCTCCAGTGGAACTCGCTTCAGTATCCGAGACTaGAGGTCCAAGGCCAGATGTGGCTCCTCCACCTTG +
Preference number: 6 (lower is better)
Translates to: GCSSGTRFSIRD*RSKARCGSSTL
Trigger: CAAGGTGGAGGAGCCACATCTGGCCTTGGACCTCCAGTCTCGGATACTGAAGCGAGTTCCACTGGAGCAACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472866.6
CDS CCA 72 bp AATCCTTTCCGCCATCCCGCAGCCCTAGTGTGTGTGTaGCTCCTTGCCTTGTTGTATTGCACACAGCGCCGC +
Preference number: 6 (lower is better)
Translates to: NPFRHPAALVCV*LLALLYCTQRR
Trigger: GCGGCGCTGTGTGCAATACAACAAGGCAAGGAGCCACACACACACTAGGGCTGCGGGATGGCGGAAAGGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490245.1
CDS CAA 72 bp GTGCCACCGAACTCATTGATGGTGTCCTGCATGACCTaGGTGGCCTCATGTAGCTCCCCATTCAGCCGGAGG +
Preference number: 6 (lower is better)
Translates to: VPPNSLMVSCMT*VASCSSPFSRR
Trigger: CCTCCGGCTGAATGGGGAGCTACATGAGGCCACCAAGGTCATGCAGGACACCATCAATGAGTTCGGTGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS CAA 72 bp ATGGCGCTCTGGCCCCAAGTGCTGTCCTTGCGTGCCTaGTTCAGGAACTTTAAGGCTTCGTTGGGCTGCCCT +
Preference number: 6 (lower is better)
Translates to: MALWPQVLSLRA*FRNFKASLGCP
Trigger: AGGGCAGCCCAACGAAGCCTTAAAGTTCCTGAACAAGGCACGCAAGGACAGCACTTGGGGCCAGAGCGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000465962.1
ENST00000472866.6
ENST00000490245.1
ENST00000493856.5
ENST00000683103.1
CDS CAA 90 bp TTCAGCGCCACGTCCACATTGCCCTTGCTCAGGACCAAGTCCACGTaGGCAATGGTGATGCGGTTCTCTTCTGGTGTGCCACCGAACTCA +
Preference number: 6 (lower is better)
Translates to: FSATSTLPLLRTKST*AMVMRFSSGVPPNS
Trigger: TGAGTTCGGTGGCACACCAGAAGAGAACCGCATCACCATTGCCAACGTGGACTTGGTCCTGAGCAAGGGCAATGTGGACGTGGCGCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000466875.1
ENST00000471025.1
ENST00000683103.1
CDS TCA 72 bp GTACTCAATGGCTTTCTTCGCAGTGTGGGGCTTGTCTaGGGTCAGGTCCACCCAGCCTCTGAGCACATAGGC +
Preference number: 6 (lower is better)
Translates to: VLNGFLRSVGLV*GQVHPASEHIG
Trigger: GCCTATGTGCTCAGAGGCTGGGTGGACCTGACCTCAGACAAGCCCCACACTGCGAAGAAAGCCATTGAGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000479954.5
ENST00000683103.1
CDS TCA 72 bp GGTAGAGGGGGTGATCTCGGACCTGGAAGTTGTGGCTaGCACCCAGCTCTAAGCAGTGGAAGCACATGCCAA +
Preference number: 6 (lower is better)
Translates to: GRGGDLGPGSCG*HPALSSGSTCQ
Trigger: TTGGCATGTGCTTCCACTGCTTAGAGCTGGGTGTCAGCCACAACTTCCAGGTCCGAGATCACCCCCTCTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS TCA 72 bp CTCCTGAATTGCTTCTCGGTCTCCTTTGGCAGCCCTTaGGGGGCTGTGTTATCTCTGGGGCAGGGCTTTCCT +
Preference number: 6 (lower is better)
Translates to: LLNCFSVSFGSP*GAVLSLGQGFP
Trigger: AGGAAAGCCCTGCCCCAGAGATAACACAGCCCCTCAAGGGCTGCCAAAGGAGACCGAGAAGCAATTCAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS CCA 72 bp AGCGTGCCCAATTCTGCTGGCCAGGGAGGCGTCATGTaGGTTCTGTCTATAGGCCTCATCATAGACCTCCAG +
Preference number: 6 (lower is better)
Translates to: SVPNSAGQGGVM*VLSIGLIIDLQ
Trigger: CTGGAGGTCTATGATGAGGCCTATAGACAGAACCCACATGACGCCTCCCTGGCCAGCAGAATTGGGCACGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000471025.1
ENST00000683103.1
CDS CCA 72 bp ACTGGTGGGCCTTCACATAAGCGTGCCCAATTCTGCTaGCCAGGGAGGCGTCATGTGGGTTCTGTCTATAGG +
Preference number: 6 (lower is better)
Translates to: TGGPSHKRAQFC*PGRRHVGSVYR
Trigger: CCTATAGACAGAACCCACATGACGCCTCCCTGGCCAGCAGAATTGGGCACGCTTATGTGAAGGCCCACCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000471025.1
ENST00000683103.1
CDS CAA 72 bp TCCAGGTACTCAATGGCTTTCTTCGCAGTGTGGGGCTaGTCTGAGGTCAGGTCCACCCAGCCTCTGAGCACA +
Preference number: 6 (lower is better)
Translates to: SRYSMAFFAVWG*SEVRSTQPLST
Trigger: TGTGCTCAGAGGCTGGGTGGACCTGACCTCAGACAAGCCCCACACTGCGAAGAAAGCCATTGAGTACCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000479954.5
ENST00000683103.1
CDS CAA 90 bp TGCTTGGGCAAGATGTTCCTTAGCATGTTCAGCGCCACGTCCACATaGCCCTTGCTCAGGACCAAGTCCACGTTGGCAATGGTGATGCGG +
Preference number: 6 (lower is better)
Translates to: CLGKMFLSMFSATST*PLLRTKSTLAMVMR
Trigger: CCGCATCACCATTGCCAACGTGGACTTGGTCCTGAGCAAGGGCAATGTGGACGTGGCGCTGAACATGCTAAGGAACATCTTGCCCAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000466875.1
ENST00000471025.1
ENST00000683103.1
CDS TCA 72 bp TGCCCTTGCTCAGGACCAAGTCCACGTTGGCAATGGTaGTGCGGTTCTCTTCTGGTGTGCCACCGAACTCAT +
Preference number: 6 (lower is better)
Translates to: CPCSGPSPRWQW*CGSLLVCHRTH
Trigger: ATGAGTTCGGTGGCACACCAGAAGAGAACCGCATCACCATTGCCAACGTGGACTTGGTCCTGAGCAAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000466875.1
ENST00000471025.1
ENST00000683103.1
CDS GCA 72 bp ATCAACACAGAAGCGGTCTCATGGTTCTGCTCAGTCTaGAGGAGGATGGCACAGTGCTGCTCACACAGGTCC +
Preference number: 6 (lower is better)
Translates to: INTEAVSWFCSV*RRMAQCCSHRS
Trigger: GGACCTGTGTGAGCAGCACTGTGCCATCCTCCTGCAGACTGAGCAGAACCATGAGACCGCTTCTGTGTTGAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000472866.6
ENST00000493856.5
ENST00000683103.1
CDS GCA 72 bp TCTGCACCATGTGGTAGATGGCGCTCTGGCCCCAAGTaGTGTCCTTGCGTGCCTTGTTCAGGAACTTTAAGG +
Preference number: 6 (lower is better)
Translates to: SAPCGRWRSGPK*CPCVPCSGTLR
Trigger: CCTTAAAGTTCCTGAACAAGGCACGCAAGGACAGCACTTGGGGCCAGAGCGCCATCTACCACATGGTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000465962.1
ENST00000472866.6
ENST00000490245.1
ENST00000493856.5
ENST00000683103.1
CDS CCA 72 bp TCCTCCCCCTTGTGCTTCCTGGACATCAGGAGGGCTTaGAGGAAAATTAGCACCTCAGACTTCCCAAGGGAC +
Preference number: 6 (lower is better)
Translates to: SSPLCFLDIRRA*RKISTSDFPRD
Trigger: GTCCCTTGGGAAGTCTGAGGTGCTAATTTTCCTCCAAGCCCTCCTGATGTCCAGGAAGCACAAGGGGGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS CCA 72 bp CAAAGTACTCAGAGCCAAGAGGGATGCCTTGCATGCTaGAGAAGTGAAGCTCCACTGCCTCCTTCAGGAGCG +
Preference number: 6 (lower is better)
Translates to: QSTQSQEGCLAC*RSEAPLPPSGA
Trigger: CGCTCCTGAAGGAGGCAGTGGAGCTTCACTTCTCCAGCATGCAAGGCATCCCTCTTGGCTCTGAGTACTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS CCA 72 bp ATCACGGCGACTTGTTTAAGAAGTGGAGACACGATCTaGCCTGGTAACCTGGGCTGCTTGGGGCAGAAGAGC +
Preference number: 6 (lower is better)
Translates to: ITATCLRSGDTI*PGNLGCLGQKS
Trigger: GCTCTTCTGCCCCAAGCAGCCCAGGTTACCAGGCCAGATCGTGTCTCCACTTCTTAAACAAGTCGCCGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS CCA 72 bp GGTTGCTCCAGTGGAACTCGCTTCAGTATCCGAGACTaGAGGTCCAAGGCCTCGAGAAACCAATCAAGCCAG +
Preference number: 6 (lower is better)
Translates to: GCSSGTRFSIRD*RSKASRNQSSQ
Trigger: CTGGCTTGATTGGTTTCTCGAGGCCTTGGACCTCCAGTCTCGGATACTGAAGCGAGTTCCACTGGAGCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481734.1
ENST00000493856.5
CDS CAA 72 bp ACGTCCACATTGCCCTTGCTCAGGACCAAGTCCACGTaGGCAATGGTGATGCGGTTCTCTTCTGGTGTGCCA +
Preference number: 6 (lower is better)
Translates to: TSTLPLLRTKST*AMVMRFSSGVP
Trigger: TGGCACACCAGAAGAGAACCGCATCACCATTGCCAACGTGGACTTGGTCCTGAGCAAGGGCAATGTGGACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000466875.1
ENST00000471025.1
ENST00000683103.1
CDS CAA 72 bp GTGATGCGGTTCTCTTCTGGTGTGCCACCGAACTCATaGATGGTGTCCTGCATGACCTTGGTGGCCTCATGC +
Preference number: 6 (lower is better)
Translates to: VMRFSSGVPPNS*MVSCMTLVASC
Trigger: GCATGAGGCCACCAAGGTCATGCAGGACACCATCAATGAGTTCGGTGGCACACCAGAAGAGAACCGCATCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466875.1
CDS CAA 90 bp TTGGCAATGGTGATGCGGTTCTCTTCTGGTGTGCCACCGAACTCATaGATGGTGTCCTGCATGACCTTGGTGGCCTCATGTAGCTCCCCA +
Preference number: 6 (lower is better)
Translates to: LAMVMRFSSGVPPNS*MVSCMTLVASCSSP
Trigger: TGGGGAGCTACATGAGGCCACCAAGGTCATGCAGGACACCATCAATGAGTTCGGTGGCACACCAGAAGAGAACCGCATCACCATTGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS CAA 90 bp GGCAAGATGTTCCTTAGCATGTTCAGCGCCACGTCCACATTGCCCTaGCTCAGGACCAAGTCCACGTTGGCAATGGTGATGCGGTTCTCT +
Preference number: 6 (lower is better)
Translates to: GKMFLSMFSATSTLP*LRTKSTLAMVMRFS
Trigger: AGAGAACCGCATCACCATTGCCAACGTGGACTTGGTCCTGAGCAAGGGCAATGTGGACGTGGCGCTGAACATGCTAAGGAACATCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000466875.1
ENST00000471025.1
ENST00000683103.1
CDS TCA 72 bp TGTGCAGAAGAAACCAGAAGCTTCCCCTTCCCACCATaGCCCCTTAGAGACTCCTGGTTTGCCATGCTCTCC +
Preference number: 6 (lower is better)
Translates to: CAEETRSFPFPP*PLRDSWFAMLS
Trigger: GGAGAGCATGGCAAACCAGGAGTCTCTAAGGGGTCATGGTGGGAAGGGGAAGCTTCTGGTTTCTTCTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459702.1
ENST00000479954.5
ENST00000493337.5
CDS TCA 72 bp TTTGACAGCCTACAGGGGAAGCCTCTCCACCCATTCTaGGAACTGCCAGGCAATAGAGGTAGGGATGAGGAC +
Preference number: 6 (lower is better)
Translates to: FDSLQGKPLHPF*ELPGNRGRDED
Trigger: GTCCTCATCCCTACCTCTATTGCCTGGCAGTTCTCAGAATGGGTGGAGAGGCTTCCCCTGTAGGCTGTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481734.1
CDS GCA 72 bp TCTTCTGGTGTGCCACCGAACTCATTGATGGTGTCCTaGATGACCTTGGTGGCCTCATGTAGCTCCCCATTC +
Preference number: 6 (lower is better)
Translates to: SSGVPPNSLMVS*MTLVASCSSPF
Trigger: GAATGGGGAGCTACATGAGGCCACCAAGGTCATGCAGGACACCATCAATGAGTTCGGTGGCACACCAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS GCA 72 bp AGATGTTCCTTAGCATGTTCAGCGCCACGTCCACATTaGCCTTGCTCAGGACCAAGTCCACGTTGGCAATGG +
Preference number: 6 (lower is better)
Translates to: RCSLACSAPRPH*PCSGPSPRWQW
Trigger: CCATTGCCAACGTGGACTTGGTCCTGAGCAAGGGCAATGTGGACGTGGCGCTGAACATGCTAAGGAACATCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000466875.1
ENST00000471025.1
ENST00000683103.1
CDS GCA 72 bp TATACTGGTGGGCCTTCACATAAGCGTGCCCAATTCTaGTGGCCAGGGAGGCGTCATGTGGGTTCTGTCTAT +
Preference number: 6 (lower is better)
Translates to: YTGGPSHKRAQF*WPGRRHVGSVY
Trigger: ATAGACAGAACCCACATGACGCCTCCCTGGCCAGCAGAATTGGGCACGCTTATGTGAAGGCCCACCAGTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000471025.1
ENST00000683103.1
CDS GCA 72 bp GCTGCCAGTTGCTTCTGGGAGGGAATCATTTCTGGTTaGTCCAGTGGAACTCGCTTCAGTATCCGAGACTGG +
Preference number: 6 (lower is better)
Translates to: AASCFWEGIISG*SSGTRFSIRDW
Trigger: CCAGTCTCGGATACTGAAGCGAGTTCCACTGGAGCAACCAGAAATGATTCCCTCCCAGAAGCAACTGGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000472866.6
ENST00000481734.1
ENST00000493856.5
ENST00000683103.1
CDS CCA 72 bp AACATCAGGTCAGCCATCAACACAGAAGCGGTCTCATaGTTCTGCTCAGTCTGCAGGAGGATGGCACAGTGC +
Preference number: 6 (lower is better)
Translates to: NIRSAINTEAVS*FCSVCRRMAQC
Trigger: GCACTGTGCCATCCTCCTGCAGACTGAGCAGAACCATGAGACCGCTTCTGTGTTGATGGCTGACCTGATGTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000472866.6
ENST00000493856.5
ENST00000683103.1
CDS CCA 72 bp GTGCCAGCAGTAGATACCTCTGCAGTAATTGAACCCTaGTTCCAAAGGCACCCGGCTAGACACCTTCTTGGC +
Preference number: 6 (lower is better)
Translates to: VPAVDTSAVIEP*FQRHPARHLLG
Trigger: GCCAAGAAGGTGTCTAGCCGGGTGCCTTTGGAACCAGGGTTCAATTACTGCAGAGGTATCTACTGCTGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000465962.1
ENST00000472866.6
ENST00000493856.5
ENST00000683103.1
CDS CCA 72 bp CCTTGCGTGCCTTGTTCAGGAACTTTAAGGCTTCGTTaGGCTGCCCTATGTGCCAGCAGTAGATACCTCTGC +
Preference number: 6 (lower is better)
Translates to: PCVPCSGTLRLR*AALCASSRYLC
Trigger: GCAGAGGTATCTACTGCTGGCACATAGGGCAGCCCAACGAAGCCTTAAAGTTCCTGAACAAGGCACGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000465962.1
ENST00000472866.6
ENST00000493856.5
ENST00000683103.1
CDS CCA 72 bp TGGCTGAGTACACATGAGGCAAGCTGGCACTGCCTCTaGGGGCAGGAGCAGAAGCAAAGGACTCAAACAAAA +
Preference number: 6 (lower is better)
Translates to: WLSTHEASWHCL*GQEQKQRTQTK
Trigger: TTTTGTTTGAGTCCTTTGCTTCTGCTCCTGCCCCCAGAGGCAGTGCCAGCTTGCCTCATGTGTACTCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493856.5
CDS CCA 72 bp CCTTGCGTGCCTTGTTCAGGAACTTTAAGGCTTCGTTaGGCTGCCCTATGTGCCTGTGGTGGAGAAAACACC +
Preference number: 6 (lower is better)
Translates to: PCVPCSGTLRLR*AALCACGGENT
Trigger: GGTGTTTTCTCCACCACAGGCACATAGGGCAGCCCAACGAAGCCTTAAAGTTCCTGAACAAGGCACGCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490245.1
CDS CAA 72 bp GTGATGCGGTTCTCTTCTGGTGTGCCACCGAACTCATaGATGGTGTCCTGCATGACCTTGGTGGCCTCATGT +
Preference number: 6 (lower is better)
Translates to: VMRFSSGVPPNS*MVSCMTLVASC
Trigger: ACATGAGGCCACCAAGGTCATGCAGGACACCATCAATGAGTTCGGTGGCACACCAGAAGAGAACCGCATCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS CAA 72 bp TTCCTTAGCATGTTCAGCGCCACGTCCACATTGCCCTaGCTCAGGACCAAGTCCACGTTGGCAATGGTGATG +
Preference number: 6 (lower is better)
Translates to: FLSMFSATSTLP*LRTKSTLAMVM
Trigger: CATCACCATTGCCAACGTGGACTTGGTCCTGAGCAAGGGCAATGTGGACGTGGCGCTGAACATGCTAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000466875.1
ENST00000471025.1
ENST00000683103.1
CDS CAA 72 bp GGCTGCCAGTTGCTTCTGGGAGGGAATCATTTCTGGTaGCTCCAGTGGAACTCGCTTCAGTATCCGAGACTG +
Preference number: 6 (lower is better)
Translates to: GCQLLLGGNHFW*LQWNSLQYPRL
Trigger: CAGTCTCGGATACTGAAGCGAGTTCCACTGGAGCAACCAGAAATGATTCCCTCCCAGAAGCAACTGGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000472866.6
ENST00000481734.1
ENST00000493856.5
ENST00000683103.1
CDS CAA 72 bp TGCGTATTTCCTTCAGGCTGTACTCAAGCTCCTGAATaGCTTCTCGGTCTCCTTTGGCAGCCCTTGAGGGGC +
Preference number: 6 (lower is better)
Translates to: CVFPSGCTQAPE*LLGLLWQPLRG
Trigger: GCCCCTCAAGGGCTGCCAAAGGAGACCGAGAAGCAATTCAGGAGCTTGAGTACAGCCTGAAGGAAATACGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS CAA 90 bp GCAGATAGAGGCTGCCAGTTGCTTCTGGGAGGGAATCATTTCTGGTaGCTCCAGTGGAACTCGCTTCAGTATCCGAGACTGGAGGTCCAA +
Preference number: 6 (lower is better)
Translates to: ADRGCQLLLGGNHFW*LQWNSLQYPRLEVQ
Trigger: TTGGACCTCCAGTCTCGGATACTGAAGCGAGTTCCACTGGAGCAACCAGAAATGATTCCCTCCCAGAAGCAACTGGCAGCCTCTATCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000472866.6
ENST00000481734.1
ENST00000493856.5
ENST00000683103.1
CDS TCA 72 bp GGGCTAACCCATAGAGTAGCCCTGTTCCTGAGTTTGTaGAGAGAAGTTGCCTTTTCAGACCCACCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: GLTHRVALFLSL*REVAFSDPPRQ
Trigger: CTGCCTGGGTGGGTCTGAAAAGGCAACTTCTCTTCACAAACTCAGGAACAGGGCTACTCTATGGGTTAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459702.1
ENST00000479954.5
ENST00000493337.5
CDS GCA 72 bp CACAGGGTCATTGCTGAATTTTTCCAGGCCCACAGCTaGAGCCTGCTGCACATGGTGGAAGTACTTTTCCTG +
Preference number: 6 (lower is better)
Translates to: HRVIAEFFQAHS*SLLHMVEVLFL
Trigger: CAGGAAAAGTACTTCCACCATGTGCAGCAGGCTGCAGCTGTGGGCCTGGAAAAATTCAGCAATGACCCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000425163.5
ENST00000430597.6
ENST00000431162.6
ENST00000431559.5
ENST00000440121.1
ENST00000459702.1
ENST00000479954.5
ENST00000490036.5
ENST00000493337.5
ENST00000683103.1
CDS GCA 72 bp ATTCTGTGTCCCATTTCTACTGTCTGCTCCCAGTCCTaGCGAGCTAAGAACAGCTGCATCTTCAGGACGAGG +
Preference number: 6 (lower is better)
Translates to: ILCPISTVCSQS*RAKNSCIFRTR
Trigger: CCTCGTCCTGAAGATGCAGCTGTTCTTAGCTCGGCAGGACTGGGAGCAGACAGTAGAAATGGGACACAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000431559.5
ENST00000440121.1
ENST00000459702.1
ENST00000479954.5
ENST00000493337.5
ENST00000683103.1
CDS CCA 72 bp GACCTGAGCCATCAAATACAGGGGGTCGATCAGAGCTaGTGCTGCTTTGACTACAGGATTCAAGATCACGGC +
Preference number: 6 (lower is better)
Translates to: DLSHQIQGVDQS*CCFDYRIQDHG
Trigger: GCCGTGATCTTGAATCCTGTAGTCAAAGCAGCACCAGCTCTGATCGACCCCCTGTATTTGATGGCTCAGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS CCA 72 bp CAAGTCCACGTTGGCAATGGTGATGCGGTTCTCTTCTaGTGTGCCACCGAACTCATTGATGGTGTCCTGCAT +
Preference number: 6 (lower is better)
Translates to: QVHVGNGDAVLF*CATELIDGVLH
Trigger: ATGCAGGACACCATCAATGAGTTCGGTGGCACACCAGAAGAGAACCGCATCACCATTGCCAACGTGGACTTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000466875.1
ENST00000683103.1
CDS CCA 72 bp CTATTTTACAAACAGGAAGCCTGCGGCTTATCCAGGTaGGGACACCTGCCCAGGCTTCCACAGATAGCACAT +
Preference number: 6 (lower is better)
Translates to: LFYKQEACGLSR*GHLPRLPQIAH
Trigger: ATGTGCTATCTGTGGAAGCCTGGGCAGGTGTCCCCACCTGGATAAGCCGCAGGCTTCCTGTTTGTAAAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459702.1
ENST00000479954.5
ENST00000493337.5
CDS CCA 72 bp TGTACATGGGAAGGTAAGACTAGTGGTAGAGACCAGTaGGGCTTTTTGACAGCCTACAGGGGAAGCCTCTCC +
Preference number: 6 (lower is better)
Translates to: CTWEGKTSGRDQ*GFLTAYRGSLS
Trigger: GGAGAGGCTTCCCCTGTAGGCTGTCAAAAAGCCCCACTGGTCTCTACCACTAGTCTTACCTTCCCATGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481734.1
CDS CAA 72 bp AAGATGTTCCTTAGCATGTTCAGCGCCACGTCCACATaGCCCTTGCTCAGGACCAAGTCCACGTTGGCAATG +
Preference number: 6 (lower is better)
Translates to: KMFLSMFSATST*PLLRTKSTLAM
Trigger: CATTGCCAACGTGGACTTGGTCCTGAGCAAGGGCAATGTGGACGTGGCGCTGAACATGCTAAGGAACATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000466875.1
ENST00000471025.1
ENST00000683103.1
CDS CAA 72 bp TCCTTGCGTGCCTTGTTCAGGAACTTTAAGGCTTCGTaGGGCTGCCCTATGTGCCTGTGGTGGAGAAAACAC +
Preference number: 6 (lower is better)
Translates to: SLRALFRNFKAS*GCPMCLWWRKH
Trigger: GTGTTTTCTCCACCACAGGCACATAGGGCAGCCCAACGAAGCCTTAAAGTTCCTGAACAAGGCACGCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490245.1
CDS CAA 90 bp TGCCAGGTAGTGCTCTGCAAATTGGATGCAGATAGAGGCTGCCAGTaGCTTCTGGGAGGGAATCATTTCTGGTTGCTCCAGTGGAACTCG +
Preference number: 6 (lower is better)
Translates to: CQVVLCKLDADRGCQ*LLGGNHFWLLQWNS
Trigger: CGAGTTCCACTGGAGCAACCAGAAATGATTCCCTCCCAGAAGCAACTGGCAGCCTCTATCTGCATCCAATTTGCAGAGCACTACCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000472866.6
ENST00000481734.1
ENST00000493856.5
ENST00000683103.1
CDS CAA 90 bp CAAGTGCTGTCCTTGCGTGCCTTGTTCAGGAACTTTAAGGCTTCGTaGGGCTGCCCTATGTGCCTGTGGTGGAGAAAACACCAAGAATCA +
Preference number: 6 (lower is better)
Translates to: QVLSLRALFRNFKAS*GCPMCLWWRKHQES
Trigger: TGATTCTTGGTGTTTTCTCCACCACAGGCACATAGGGCAGCCCAACGAAGCCTTAAAGTTCCTGAACAAGGCACGCAAGGACAGCACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490245.1
CDS TCA 72 bp CGGTACTCAGCTTCCTCCAGGTGGCCTTCTAAGATATaGCACAAGATGATCCCTGTCAAACCAGCCATGCCA +
Preference number: 6 (lower is better)
Translates to: RYSASSRWPSKI*HKMIPVKPAMP
Trigger: TGGCATGGCTGGTTTGACAGGGATCATCTTGTGTCATATCTTAGAAGGCCACCTGGAGGAAGCTGAGTACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS TCA 72 bp GTCTTGCGTATTTCCTTCAGGCTGTACTCAAGCTCCTaGATTGCTTCTCGGTCTCCTTTGGCAGCCCTTGAG +
Preference number: 6 (lower is better)
Translates to: VLRISFRLYSSS*IASRSPLAALE
Trigger: CTCAAGGGCTGCCAAAGGAGACCGAGAAGCAATTCAGGAGCTTGAGTACAGCCTGAAGGAAATACGCAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425163.5
CDS TCA 72 bp AGTCACAGTGATCTGGTTCACCACCTCCAGGGCCTCTaGGTAGTTCTGCTGCATCATGAAGTACATTGCCTC +
Preference number: 6 (lower is better)
Translates to: SHSDLVHHLQGL*VVLLHHEVHCL
Trigger: GAGGCAATGTACTTCATGATGCAGCAGAACTACTCAGAGGCCCTGGAGGTGGTGAACCAGATCACTGTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440121.1
ENST00000459702.1
CDS GCA 72 bp TTTCAAAGTACTCAGAGCCAAGAGGGATGCCTTGCATaGTGGAGAAGTGAAGCTCCACTGCCTCCTTCAGGA +
Preference number: 6 (lower is better)
Translates to: FQSTQSQEGCLA*WRSEAPLPPSG
Trigger: TCCTGAAGGAGGCAGTGGAGCTTCACTTCTCCAGCATGCAAGGCATCCCTCTTGGCTCTGAGTACTTTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS GCA 72 bp CGTGCCTTGTTCAGGAACTTTAAGGCTTCGTTGGGCTaGCCTATGTGCCTGTGGTGGAGAAAACACCAAGAA +
Preference number: 6 (lower is better)
Translates to: RALFRNFKASLG*PMCLWWRKHQE
Trigger: TTCTTGGTGTTTTCTCCACCACAGGCACATAGGGCAGCCCAACGAAGCCTTAAAGTTCCTGAACAAGGCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490245.1
CDS CCA 72 bp TTGCTTCTGGGAGGGAATCATTTCTGGTTGCTCCAGTaGAACTCGCTTCAGTATCCGAGACTGGAGGTCCAA +
Preference number: 6 (lower is better)
Translates to: LLLGGNHFWLLQ*NSLQYPRLEVQ
Trigger: TTGGACCTCCAGTCTCGGATACTGAAGCGAGTTCCACTGGAGCAACCAGAAATGATTCCCTCCCAGAAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000472866.6
ENST00000481734.1
ENST00000493856.5
ENST00000683103.1
CDS CAA 72 bp CAGCTTTTCAAAGTACTCAGAGCCAAGAGGGATGCCTaGCATGCTGGAGAAGTGAAGCTCCACTGCCTCCTT +
Preference number: 6 (lower is better)
Translates to: QLFKVLRAKRDA*HAGEVKLHCLL
Trigger: AAGGAGGCAGTGGAGCTTCACTTCTCCAGCATGCAAGGCATCCCTCTTGGCTCTGAGTACTTTGAAAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS CAA 72 bp GTGCTCTGCAAATTGGATGCAGATAGAGGCTGCCAGTaGCTTCTGGGAGGGAATCATTTCTGGTTGCTCCAG +
Preference number: 6 (lower is better)
Translates to: VLCKLDADRGCQ*LLGGNHFWLLQ
Trigger: CTGGAGCAACCAGAAATGATTCCCTCCCAGAAGCAACTGGCAGCCTCTATCTGCATCCAATTTGCAGAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000472866.6
ENST00000481734.1
ENST00000493856.5
ENST00000683103.1
CDS CAA 90 bp TACCGCCTTGTCATACTCTTTCTCTGCCAGGTAGTGCTCTGCAAATaGGATGCAGATAGAGGCTGCCAGTTGCTTCTGGGAGGGAATCAT +
Preference number: 6 (lower is better)
Translates to: YRLVILFLCQVVLCK*DADRGCQLLLGGNH
Trigger: ATGATTCCCTCCCAGAAGCAACTGGCAGCCTCTATCTGCATCCAATTTGCAGAGCACTACCTGGCAGAGAAAGAGTATGACAAGGCGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000472866.6
ENST00000481734.1
ENST00000493856.5
ENST00000683103.1
CDS TCA 72 bp AGTCACAGTGATCTGGTTCACCACCTCCAGGGCCTCTaGGTAGTTCTGCTGCATCATGAAGTACATTGCCTT +
Preference number: 6 (lower is better)
Translates to: SHSDLVHHLQGL*VVLLHHEVHCL
Trigger: AAGGCAATGTACTTCATGATGCAGCAGAACTACTCAGAGGCCCTGGAGGTGGTGAACCAGATCACTGTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000431559.5
ENST00000479954.5
ENST00000493337.5
ENST00000683103.1
CDS GCA 72 bp TGCTCTGCAAATTGGATGCAGATAGAGGCTGCCAGTTaGTTCTGGGAGGGAATCATTTCTGGTTGCTCCAGT +
Preference number: 6 (lower is better)
Translates to: CSANWMQIEAAS*FWEGIISGCSS
Trigger: ACTGGAGCAACCAGAAATGATTCCCTCCCAGAAGCAACTGGCAGCCTCTATCTGCATCCAATTTGCAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000472866.6
ENST00000481734.1
ENST00000493856.5
ENST00000683103.1
CDS GCA 72 bp TTCAGGAACTTTAAGGCTTCGTTGGGCTGCCCTATGTaGCTGTGGTGGAGAAAACACCAAGAATCAGTGAGG +
Preference number: 6 (lower is better)
Translates to: FRNFKASLGCPM*LWWRKHQESVR
Trigger: CCTCACTGATTCTTGGTGTTTTCTCCACCACAGGCACATAGGGCAGCCCAACGAAGCCTTAAAGTTCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490245.1
CDS CCA 72 bp CAATTTGATGACCATTTTCAGCGTCTTTATGGCCTCTaGATAGTCTCCAGCCTTGTTGAGGGCCCTGGCCTT +
Preference number: 6 (lower is better)
Translates to: QFDDHFQRLYGL*IVSSLVEGPGL
Trigger: AAGGCCAGGGCCCTCAACAAGGCTGGAGACTATCCAGAGGCCATAAAGACGCTGAAAATGGTCATCAAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS CCA 72 bp GGTTGCTCCAGTGGAACTCGCTTCAGTATCCGAGACTaGAGGTCCAAGGCCTTGTTCAAAGTTTCTATCACA +
Preference number: 6 (lower is better)
Translates to: GCSSGTRFSIRD*RSKALFKVSIT
Trigger: TGTGATAGAAACTTTGAACAAGGCCTTGGACCTCCAGTCTCGGATACTGAAGCGAGTTCCACTGGAGCAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS CCA 72 bp CAAGACTTACGAGCATGTTTGGGGCCCAGTATTACCTaGCCAATGCCTGAGCAGTTCCAACTATCCCCTAAA +
Preference number: 6 (lower is better)
Translates to: QDLRACLGPSIT*PMPEQFQLSPK
Trigger: TTTAGGGGATAGTTGGAACTGCTCAGGCATTGGCCAGGTAATACTGGGCCCCAAACATGCTCGTAAGTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459702.1
ENST00000479954.5
ENST00000493337.5
CDS CAA 72 bp GTCATACTCTTTCTCTGCCAGGTAGTGCTCTGCAAATaGGATGCAGATAGAGGCTGCCAGTTGCTTCTGGGA +
Preference number: 6 (lower is better)
Translates to: VILFLCQVVLCK*DADRGCQLLLG
Trigger: TCCCAGAAGCAACTGGCAGCCTCTATCTGCATCCAATTTGCAGAGCACTACCTGGCAGAGAAAGAGTATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000472866.6
ENST00000481734.1
ENST00000493856.5
ENST00000683103.1
CDS CAA 72 bp AACCCTGGTTCCAAAGGCACCCGGCTAGACACCTTCTaGGCCAATTCAAAGAAGGCAGGAATGTCTTCAAGT +
Preference number: 6 (lower is better)
Translates to: NPGSKGTRLDTF*ANSKKAGMSSS
Trigger: ACTTGAAGACATTCCTGCCTTCTTTGAATTGGCCAAGAAGGTGTCTAGCCGGGTGCCTTTGGAACCAGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000465962.1
ENST00000472866.6
ENST00000493856.5
ENST00000683103.1
CDS TCA 72 bp AGAGGAAAAGGCCAGCATAGTACAGTGCAGTCCCACTaGCTGTCTTGCGTATTTCCTTCAGGCTGTACTCAA +
Preference number: 6 (lower is better)
Translates to: RGKGQHSTVQSH*LSCVFPSGCTQ
Trigger: TTGAGTACAGCCTGAAGGAAATACGCAAGACAGTCAGTGGGACTGCACTGTACTATGCTGGCCTTTTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000425163.5
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000459702.1
ENST00000479954.5
ENST00000683103.1
CDS TCA 72 bp CAGAGCCTAGAATCAATCTCACTGCCTGATGCTGCCTaGCTCCCAAGCTACACAACTCAAAGAGTCAAACCA +
Preference number: 6 (lower is better)
Translates to: QSLESISLPDAA*LPSYTTQRVKP
Trigger: TGGTTTGACTCTTTGAGTTGTGTAGCTTGGGAGTCAGGCAGCATCAGGCAGTGAGATTGATTCTAGGCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459702.1
ENST00000479954.5
ENST00000493337.5
CDS CCA 72 bp TGTCCAACACATGAAAGGTTAGAAAGGTTAGGCAATTaGTCTGAGGTCACCCAGCCACCTAGGTCACTGACA +
Preference number: 6 (lower is better)
Translates to: CPTHERLERLGN*SEVTQPPRSLT
Trigger: TGTCAGTGACCTAGGTGGCTGGGTGACCTCAGACCAATTGCCTAACCTTTCTAACCTTTCATGTGTTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459702.1
ENST00000479954.5
ENST00000493337.5
CDS CAA 72 bp CACAAGATGATCCCTGTCAAACCAGCCATGCCATCCTaGTCCAGTTTCATGGCTTCTGAATACCACAGCAAG +
Preference number: 6 (lower is better)
Translates to: HKMIPVKPAMPS*SSFMASEYHSK
Trigger: CTTGCTGTGGTATTCAGAAGCCATGAAACTGGACAAGGATGGCATGGCTGGTTTGACAGGGATCATCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS CAA 72 bp GGTTTCTTTGGAAAACTACAAGACTTACGAGCATGTTaGGGGCCCAGTATTACCTGGCCAATGCCTGAGCAG +
Preference number: 6 (lower is better)
Translates to: GFFGKLQDLRAC*GPSITWPMPEQ
Trigger: CTGCTCAGGCATTGGCCAGGTAATACTGGGCCCCAAACATGCTCGTAAGTCTTGTAGTTTTCCAAAGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459702.1
ENST00000479954.5
ENST00000493337.5
CDS CCA 72 bp GTTTCTTTGGAAAACTACAAGACTTACGAGCATGTTTaGGGCCCAGTATTACCTGGCCAATGCCTGAGCAGT +
Preference number: 6 (lower is better)
Translates to: VSLENYKTYEHV*GPVLPGQCLSS
Trigger: ACTGCTCAGGCATTGGCCAGGTAATACTGGGCCCCAAACATGCTCGTAAGTCTTGTAGTTTTCCAAAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459702.1
ENST00000479954.5
ENST00000493337.5
CDS CAA 72 bp ATCAAATACAGGGGGTCGATCAGAGCTGGTGCTGCTTaGACTACAGGATTCAAGATCACGGCGACTTGTTTA +
Preference number: 6 (lower is better)
Translates to: IKYRGSIRAGAA*TTGFKITATCL
Trigger: TAAACAAGTCGCCGTGATCTTGAATCCTGTAGTCAAAGCAGCACCAGCTCTGATCGACCCCCTGTATTTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS CCA 72 bp CAAGGATCACCTTCTGAGTCTTCAAAGAACTTACTGTaGTCATGTTTCCTTCTCTTGCAAGCTCATGCACGG +
Preference number: 6 (lower is better)
Translates to: QGSPSESSKNLL*SCFLLLQAHAR
Trigger: CCGTGCATGAGCTTGCAAGAGAAGGAAACATGACCACAGTAAGTTCTTTGAAGACTCAGAAGGTGATCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459702.1
ENST00000479954.5
ENST00000493337.5
CDS GCA 72 bp CTTACTGTGGTCATGTTTCCTTCTCTTGCAAGCTCATaGACGGTTAGAATTTGGCAGGCATCAATATTGCTC +
Preference number: 6 (lower is better)
Translates to: LTVVMFPSLASS*TVRIWQASILL
Trigger: GAGCAATATTGATGCCTGCCAAATTCTAACCGTGCATGAGCTTGCAAGAGAAGGAAACATGACCACAGTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000431162.6
ENST00000459702.1
ENST00000479954.5
ENST00000493337.5
CDS GCA 72 bp CTTATAAGACTGTACCGCCTTGTCATACTCTTTCTCTaGCAGGTAGTGCTCTGCAAATTGGATGCAGATAGA +
Preference number: 6 (lower is better)
Translates to: LIRLYRLVILFL*QVVLCKLDADR
Trigger: TCTATCTGCATCCAATTTGCAGAGCACTACCTGGCAGAGAAAGAGTATGACAAGGCGGTACAGTCTTATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000472866.6
ENST00000481734.1
ENST00000493856.5
ENST00000683103.1
CDS CAA 72 bp TCTGCTTTATTGACCTTCTTTAACTTCAGGAGCAGTTaGCCCAGATCGCAGCACAGAAAGTCCTGTCCATTA +
Preference number: 6 (lower is better)
Translates to: SALLTFFNFRSS*PRSQHRKSCPL
Trigger: TAATGGACAGGACTTTCTGTGCTGCGATCTGGGCAAACTGCTCCTGAAGTTAAAGAAGGTCAATAAAGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS CAA 72 bp AGGAGCAGAAGCAAAGGACTCAAACAAAACACGCTTTaGTACTTAGCCTGTTTACCTGCTTCCATCACACCT +
Preference number: 6 (lower is better)
Translates to: RSRSKGLKQNTL*YLACLPASITP
Trigger: AGGTGTGATGGAAGCAGGTAAACAGGCTAAGTACAAAAGCGTGTTTTGTTTGAGTCCTTTGCTTCTGCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493856.5
CDS CAA 90 bp CCTTCTGAGTCTTCAAAGAACTTACTGTGGTCATGTTTCCTTCTCTaGCAAGCTCATGCACGGTTAGAATTTGGCAGGCATCAATATTGC +
Preference number: 6 (lower is better)
Translates to: PSESSKNLLWSCFLL*QAHARLEFGRHQYC
Trigger: GCAATATTGATGCCTGCCAAATTCTAACCGTGCATGAGCTTGCAAGAGAAGGAAACATGACCACAGTAAGTTCTTTGAAGACTCAGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000431162.6
ENST00000459702.1
ENST00000479954.5
ENST00000493337.5
CDS CAA 90 bp ACAATGTCATGTTCCAGTGCCTGCTTCAAAACTTTTTCTGCTTTATaGACCTTCTTTAACTTCAGGAGCAGTTTGCCCAGATCGCAGCAC +
Preference number: 6 (lower is better)
Translates to: TMSCSSACFKTFSAL*TFFNFRSSLPRSQH
Trigger: GTGCTGCGATCTGGGCAAACTGCTCCTGAAGTTAAAGAAGGTCAATAAAGCAGAAAAAGTTTTGAAGCAGGCACTGGAACATGACATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS TCA 72 bp GGGTTCCTCCTTGATTCTGTTTCAAGGATCACCTTCTaGGTCTTCAAAGAACTTACTGTGGTCATGTTTCCT +
Preference number: 6 (lower is better)
Translates to: GFLLDSVSRITF*VFKELTVVMFP
Trigger: AGGAAACATGACCACAGTAAGTTCTTTGAAGACTCAGAAGGTGATCCTTGAAACAGAATCAAGGAGGAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459702.1
ENST00000479954.5
ENST00000493337.5
CDS CAA 72 bp TCTTCAAAGAACTTACTGTGGTCATGTTTCCTTCTCTaGCAAGCTCATGCACGGTTAGAATTTGGCAGGCAT +
Preference number: 6 (lower is better)
Translates to: SSKNLLWSCFLL*QAHARLEFGRH
Trigger: ATGCCTGCCAAATTCTAACCGTGCATGAGCTTGCAAGAGAAGGAAACATGACCACAGTAAGTTCTTTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000431162.6
ENST00000459702.1
ENST00000479954.5
ENST00000493337.5
CDS CAA 90 bp TCTCTTGCAAGCTCATGCACGGTTAGAATTTGGCAGGCATCAATATaGCTCTCATCTTTTTCTAGGATTCTGTGTCCCATTTCTACTGTC +
Preference number: 6 (lower is better)
Translates to: SLASSCTVRIWQASI*LSSFSRILCPISTV
Trigger: GACAGTAGAAATGGGACACAGAATCCTAGAAAAAGATGAGAGCAATATTGATGCCTGCCAAATTCTAACCGTGCATGAGCTTGCAAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000431559.5
ENST00000440121.1
ENST00000459702.1
ENST00000479954.5
ENST00000493337.5
ENST00000683103.1
CDS TCA 72 bp CATGCTAAAACATGGGAATCAAACAGACCCTTCACTTaGTGCACAAGTAAACAGTGGGTGGAATCAAAGAAC +
Preference number: 6 (lower is better)
Translates to: HAKTWESNRPFT*CTSKQWVESKN
Trigger: GTTCTTTGATTCCACCCACTGTTTACTTGTGCATCAAGTGAAGGGTCTGTTTGATTCCCATGTTTTAGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466875.1
CDS GCA 72 bp CTACTATCAGTTAACATTGATGGAATTACTGTAGTGTaGCAGGGACTGTTCCAAACTCTCCCACTTCTTATC +
Preference number: 6 (lower is better)
Translates to: LLSVNIDGITVV*QGLFQTLPLLI
Trigger: GATAAGAAGTGGGAGAGTTTGGAACAGTCCCTGGCACACTACAGTAATTCCATCAATGTTAACTGATAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459702.1
ENST00000479954.5
ENST00000493337.5
CDS GCA 72 bp CTTATAAGACTGTACCGCCTTGTCATACTCTTTCTCTaGCAGGTAGTGCTCTTGTTCAAAGTTTCTATCACA +
Preference number: 6 (lower is better)
Translates to: LIRLYRLVILFL*QVVLLFKVSIT
Trigger: TGTGATAGAAACTTTGAACAAGAGCACTACCTGGCAGAGAAAGAGTATGACAAGGCGGTACAGTCTTATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473587.1
CDS CCA 72 bp TTTCCTTCTCTTGCAAGCTCATGCACGGTTAGAATTTaGCAGGCATCAATATTGCTCTCATCTTTTTCTAGG +
Preference number: 6 (lower is better)
Translates to: FPSLASSCTVRI*QASILLSSFSR
Trigger: CCTAGAAAAAGATGAGAGCAATATTGATGCCTGCCAAATTCTAACCGTGCATGAGCTTGCAAGAGAAGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000431559.5
ENST00000440121.1
ENST00000459702.1
ENST00000479954.5
ENST00000493337.5
ENST00000683103.1
CDS CCA 72 bp CAAACTCTCCCACTTCTTATCACATTTAGTCCTGTGTaGAATTCTGTCTATTTTACAAACAGGAAGCCTGCG +
Preference number: 6 (lower is better)
Translates to: QTLPLLITFSPV*NSVYFTNRKPA
Trigger: CGCAGGCTTCCTGTTTGTAAAATAGACAGAATTCCACACAGGACTAAATGTGATAAGAAGTGGGAGAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459702.1
ENST00000479954.5
ENST00000493337.5
CDS CAA 90 bp AAAACTTTTTCTGCTTTATTGACCTTCTTTAACTTCAGGAGCAGTTaGCCCAGATCGCAGCACAGAAAGTCCTGTCCATTAATCTTCTGG +
Preference number: 6 (lower is better)
Translates to: KTFSALLTFFNFRSS*PRSQHRKSCPLIFW
Trigger: CCAGAAGATTAATGGACAGGACTTTCTGTGCTGCGATCTGGGCAAACTGCTCCTGAAGTTAAAGAAGGTCAATAAAGCAGAAAAAGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1
CDS GCA 72 bp GATGGGATGTCTTGGACAATGTCATGTTCCAGTGCCTaGTTCAAAACTTTTTCTGCTTTATTGACCTTCTTT +
Preference number: 6 (lower is better)
Translates to: DGMSWTMSCSSA*FKTFSALLTFF
Trigger: AAAGAAGGTCAATAAAGCAGAAAAAGTTTTGAAGCAGGCACTGGAACATGACATTGTCCAAGACATCCCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430597.6
ENST00000431162.6
ENST00000440121.1
ENST00000683103.1